BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 014560
         (422 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359493861|ref|XP_003634682.1| PREDICTED: leucine-rich repeat-containing protein 40-like isoform 2
           [Vitis vinifera]
 gi|302143032|emb|CBI20327.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/421 (80%), Positives = 380/421 (90%), Gaps = 1/421 (0%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           KLDVEGNKLT+LS N+IASW +LTEL AS+NLL G+PE IG LSRLIRLD HQNRI SIP
Sbjct: 164 KLDVEGNKLTMLSENMIASWVLLTELNASRNLLTGLPENIGRLSRLIRLDFHQNRISSIP 223

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 122
           +SI GCCSLAEFYMGNN LS+L AE+G LS LGTLDLHSNQLKEY VEAC+LRL VLDLS
Sbjct: 224 ASIKGCCSLAEFYMGNNVLSSLTAEIGALSLLGTLDLHSNQLKEYPVEACKLRLQVLDLS 283

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NNSLSGLPPEIG MTTLRKL+LTGNPLRTLRSSLV+GPTPALLK+LRSRL  +EDSEA+T
Sbjct: 284 NNSLSGLPPEIGMMTTLRKLVLTGNPLRTLRSSLVSGPTPALLKFLRSRLSTDEDSEAAT 343

Query: 183 T-KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
           T KE+++TMA R+S+TSKELSLEGM LSA+P+++WE+ EI K+DLSRNSIQELPPEL+SC
Sbjct: 344 TAKENVVTMAARISITSKELSLEGMGLSAVPAQVWESSEIVKVDLSRNSIQELPPELTSC 403

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
            SLQ LILSRNKI++WP  IL SL +LSCLKLDNNPLRQ+P+DGF+ +  LQILDLS N 
Sbjct: 404 VSLQALILSRNKIQEWPGVILKSLPNLSCLKLDNNPLRQIPADGFQAVSKLQILDLSGNS 463

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
           ASLP+NP FSSLP LQELYLRRMQL E P+DIL LQQL+ILDLSQNSLQ IPEGFKNLTS
Sbjct: 464 ASLPDNPAFSSLPQLQELYLRRMQLCEVPSDILSLQQLQILDLSQNSLQLIPEGFKNLTS 523

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
           LTEL+LSDN+I+ LPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE
Sbjct: 524 LTELNLSDNSIATLPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 583

Query: 422 N 422
           +
Sbjct: 584 H 584



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 134/333 (40%), Gaps = 107/333 (32%)

Query: 191 ATRLSVTSKELSLEGMNLSAIPSEI-------------WEAGEITK-------------- 223
           A + +  S  L+L    L  +P E+             WEA E+ K              
Sbjct: 4   ALKAARASGSLNLSNRALREVPDEVYRSLDAIGEGEKWWEAVELQKLILAHNDIESLRED 63

Query: 224 --------------------------------LDLSRNSIQELPPELSSCASLQTLILSR 251
                                           LDLS+NSI ++P  + S  SL  L  S 
Sbjct: 64  LKNLSLLSVLNLSNNKLVHLPAAIGELPMLKSLDLSQNSIVDIPEVIGSATSLVKLDCSN 123

Query: 252 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFS 311
           NK+KD P++ L   S+L  LK  NN +  +P D    + +++ LD+  N  ++      +
Sbjct: 124 NKLKDLPNS-LGRCSNLLELKASNNCITSLPEDLAHCLKLIK-LDVEGNKLTMLSENMIA 181

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE------- 364
           S   L EL   R  L   P +I RL +L  LD  QN + SIP   K   SL E       
Sbjct: 182 SWVLLTELNASRNLLTGLPENIGRLSRLIRLDFHQNRISSIPASIKGCCSLAEFYMGNNV 241

Query: 365 --------------------------------------LDLSDNNISALPPELGLLEPSL 386
                                                 LDLS+N++S LPPE+G++  +L
Sbjct: 242 LSSLTAEIGALSLLGTLDLHSNQLKEYPVEACKLRLQVLDLSNNSLSGLPPEIGMMT-TL 300

Query: 387 QALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           + L L GNPLR++R +++   T A+LK+L+ ++
Sbjct: 301 RKLVLTGNPLRTLRSSLVSGPTPALLKFLRSRL 333


>gi|225461397|ref|XP_002284846.1| PREDICTED: leucine-rich repeat-containing protein 40-like isoform 1
           [Vitis vinifera]
          Length = 588

 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/425 (79%), Positives = 377/425 (88%), Gaps = 5/425 (1%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           KLDVEGNKLT+LS N+IASW +LTEL AS+NLL G+PE IG LSRLIRLD HQNRI SIP
Sbjct: 164 KLDVEGNKLTMLSENMIASWVLLTELNASRNLLTGLPENIGRLSRLIRLDFHQNRISSIP 223

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 122
           +SI GCCSLAEFYMGNN LS+L AE+G LS LGTLDLHSNQLKEY VEAC+LRL VLDLS
Sbjct: 224 ASIKGCCSLAEFYMGNNVLSSLTAEIGALSLLGTLDLHSNQLKEYPVEACKLRLQVLDLS 283

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED----- 177
           NNSLSGLPPEIG MTTLRKL+LTGNPLRTLRSSLV+GPTPALLK+LRSRL  +E      
Sbjct: 284 NNSLSGLPPEIGMMTTLRKLVLTGNPLRTLRSSLVSGPTPALLKFLRSRLSTDEGVFLFF 343

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
           + A+T KE+++TMA R+S+TSKELSLEGM LSA+P+++WE+ EI K+DLSRNSIQELPPE
Sbjct: 344 TSATTAKENVVTMAARISITSKELSLEGMGLSAVPAQVWESSEIVKVDLSRNSIQELPPE 403

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           L+SC SLQ LILSRNKI++WP  IL SL +LSCLKLDNNPLRQ+P+DGF+ +  LQILDL
Sbjct: 404 LTSCVSLQALILSRNKIQEWPGVILKSLPNLSCLKLDNNPLRQIPADGFQAVSKLQILDL 463

Query: 298 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
           S N ASLP+NP FSSLP LQELYLRRMQL E P+DIL LQQL+ILDLSQNSLQ IPEGFK
Sbjct: 464 SGNSASLPDNPAFSSLPQLQELYLRRMQLCEVPSDILSLQQLQILDLSQNSLQLIPEGFK 523

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           NLTSLTEL+LSDN+I+ LPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD
Sbjct: 524 NLTSLTELNLSDNSIATLPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 583

Query: 418 KIPEN 422
           KIPE+
Sbjct: 584 KIPEH 588



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 134/333 (40%), Gaps = 107/333 (32%)

Query: 191 ATRLSVTSKELSLEGMNLSAIPSEI-------------WEAGEITK-------------- 223
           A + +  S  L+L    L  +P E+             WEA E+ K              
Sbjct: 4   ALKAARASGSLNLSNRALREVPDEVYRSLDAIGEGEKWWEAVELQKLILAHNDIESLRED 63

Query: 224 --------------------------------LDLSRNSIQELPPELSSCASLQTLILSR 251
                                           LDLS+NSI ++P  + S  SL  L  S 
Sbjct: 64  LKNLSLLSVLNLSNNKLVHLPAAIGELPMLKSLDLSQNSIVDIPEVIGSATSLVKLDCSN 123

Query: 252 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFS 311
           NK+KD P++ L   S+L  LK  NN +  +P D    + +++ LD+  N  ++      +
Sbjct: 124 NKLKDLPNS-LGRCSNLLELKASNNCITSLPEDLAHCLKLIK-LDVEGNKLTMLSENMIA 181

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE------- 364
           S   L EL   R  L   P +I RL +L  LD  QN + SIP   K   SL E       
Sbjct: 182 SWVLLTELNASRNLLTGLPENIGRLSRLIRLDFHQNRISSIPASIKGCCSLAEFYMGNNV 241

Query: 365 --------------------------------------LDLSDNNISALPPELGLLEPSL 386
                                                 LDLS+N++S LPPE+G++  +L
Sbjct: 242 LSSLTAEIGALSLLGTLDLHSNQLKEYPVEACKLRLQVLDLSNNSLSGLPPEIGMMT-TL 300

Query: 387 QALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           + L L GNPLR++R +++   T A+LK+L+ ++
Sbjct: 301 RKLVLTGNPLRTLRSSLVSGPTPALLKFLRSRL 333


>gi|224114980|ref|XP_002316909.1| predicted protein [Populus trichocarpa]
 gi|222859974|gb|EEE97521.1| predicted protein [Populus trichocarpa]
          Length = 580

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 331/423 (78%), Positives = 370/423 (87%), Gaps = 5/423 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++K+DVEGNKL VLS NL+ASWTMLTE  ASKNLL+ +P+  GSLSRLIRLDLHQNRI +
Sbjct: 162 LTKVDVEGNKLKVLSGNLMASWTMLTEFNASKNLLSDIPDNFGSLSRLIRLDLHQNRIST 221

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IP SI GCCSLAEFYMGNNALS LPAE+G LS+LGTLDLHSNQLKE   EAC+L+LS+LD
Sbjct: 222 IPPSIMGCCSLAEFYMGNNALSTLPAEIGALSRLGTLDLHSNQLKEIPAEACKLQLSMLD 281

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           LSNNSL+GLPPE+GKMTTLRKLLL GNPLRTLRSSLV+GPT  LL YLRSRL E EDS+A
Sbjct: 282 LSNNSLTGLPPELGKMTTLRKLLLNGNPLRTLRSSLVSGPTATLLNYLRSRLSEGEDSKA 341

Query: 181 ST-TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +T  K+DLI+M  RLSV+SKELSL+G+ LSA+PSE+WE+ EI K+DLSRNSIQELP ELS
Sbjct: 342 TTPAKKDLISMTARLSVSSKELSLQGLGLSAVPSEVWESNEIVKVDLSRNSIQELPLELS 401

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C     LILSRNKI DWP AIL SL +L CLKLDNN L Q+PSDGF+ +PMLQILDLS 
Sbjct: 402 LCC----LILSRNKISDWPCAILKSLPNLICLKLDNNALTQIPSDGFQAVPMLQILDLSG 457

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           N ASL  +P FSSLPHL+ELYLR++QLRE P+DIL LQQL+IL+LSQNSL SIPEG KNL
Sbjct: 458 NPASLLGHPAFSSLPHLKELYLRQVQLREIPSDILSLQQLQILNLSQNSLHSIPEGLKNL 517

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL DKI
Sbjct: 518 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLMDKI 577

Query: 420 PEN 422
           PE+
Sbjct: 578 PEH 580



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 155/327 (47%), Gaps = 29/327 (8%)

Query: 119 LDLSNNSLSGLPPEIGKM-------------TTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
           L+LSN SLS +P E+ K+               L+KL+L  N +  ++  L N     +L
Sbjct: 14  LNLSNRSLSEVPDEVYKILDAVGEGEKWWENVELQKLILAHNNIEAIKEDLKNLSQLTVL 73

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRL---------SVTS-KELSLEGMNLSAIPSEI 215
               ++L     +        L+ ++  L         S TS  +       L  +PS +
Sbjct: 74  NVSHNKLSALPAAIGELPMLKLLDVSFNLIQKVPDEIGSATSLVKFDCSSNQLRELPSSL 133

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
                ++ L  S NSI  LP +L+ C+ L  + +  NK+K     ++ S + L+      
Sbjct: 134 GGCLALSDLKASNNSITSLPEDLARCSKLTKVDVEGNKLKVLSGNLMASWTMLTEFNASK 193

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N L  +P D F  +  L  LDL  N I+++P  P       L E Y+    L   P +I 
Sbjct: 194 NLLSDIP-DNFGSLSRLIRLDLHQNRISTIP--PSIMGCCSLAEFYMGNNALSTLPAEIG 250

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            L +L  LDL  N L+ IP     L  L+ LDLS+N+++ LPPELG +  +L+ L L+GN
Sbjct: 251 ALSRLGTLDLHSNQLKEIPAEACKL-QLSMLDLSNNSLTGLPPELGKMT-TLRKLLLNGN 308

Query: 395 PLRSIRRTILDRGTKAVLKYLKDKIPE 421
           PLR++R +++   T  +L YL+ ++ E
Sbjct: 309 PLRTLRSSLVSGPTATLLNYLRSRLSE 335



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 44/204 (21%)

Query: 186 DLITMATRLSVTSKELSLEGMNLSAIPSEI-------------WEAGEITKLDLSRNSIQ 232
           D +  A R   +S  L+L   +LS +P E+             WE  E+ KL L+ N+I+
Sbjct: 2   DRVLKAAR---SSGSLNLSNRSLSEVPDEVYKILDAVGEGEKWWENVELQKLILAHNNIE 58

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            +  +L + + L  L +S NK+   P AI                          ++PML
Sbjct: 59  AIKEDLKNLSQLTVLNVSHNKLSALPAAI-------------------------GELPML 93

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           ++LD+S+N I  +P+     S   L +      QLRE P+ +     L  L  S NS+ S
Sbjct: 94  KLLDVSFNLIQKVPDE--IGSATSLVKFDCSSNQLRELPSSLGGCLALSDLKASNNSITS 151

Query: 352 IPEGFKNLTSLTELDLSDNNISAL 375
           +PE     + LT++D+  N +  L
Sbjct: 152 LPEDLARCSKLTKVDVEGNKLKVL 175


>gi|356549743|ref|XP_003543250.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Glycine
           max]
          Length = 583

 Score =  626 bits (1615), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 328/421 (77%), Positives = 378/421 (89%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +SKLD+EGN+LTV+S NLI+SWTMLTE  +SKNLLNG+P +IG LSRLIRLDLHQNRI +
Sbjct: 162 LSKLDMEGNRLTVMSENLISSWTMLTEFNSSKNLLNGIPTSIGGLSRLIRLDLHQNRISA 221

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IPSSI GC SL E Y+GNN +S LP E+G LS+LGTLDLHSNQLK+Y VEAC+L L VLD
Sbjct: 222 IPSSIIGCHSLTELYLGNNNISTLPVEIGALSRLGTLDLHSNQLKDYPVEACKLSLLVLD 281

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           LSNNSLSGLPPE+GKMTTLRKLLL+GNP+RTLRSSLV+GPTPALLK+LRSRL E+EDSEA
Sbjct: 282 LSNNSLSGLPPEMGKMTTLRKLLLSGNPMRTLRSSLVSGPTPALLKFLRSRLSEDEDSEA 341

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
            TT +++ITMATRLS++SKELS+E + LSA+PSE+WE+GE+ KL+LSRNSIQELP ELSS
Sbjct: 342 VTTTKEVITMATRLSISSKELSMEELGLSAVPSEVWESGEVIKLNLSRNSIQELPVELSS 401

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
           C SLQTLILS+N+IKDWP +IL SLSSLSCLKLDNNPLRQ+PSDGF+ +P LQILDLS N
Sbjct: 402 CVSLQTLILSKNQIKDWPGSILKSLSSLSCLKLDNNPLRQIPSDGFEMVPKLQILDLSGN 461

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
            ASL + P FSSLP+LQELYLRRM+L E P+DI+ L QLRILDLSQNSLQSIP G K LT
Sbjct: 462 AASLLDGPAFSSLPYLQELYLRRMRLSEVPSDIVGLHQLRILDLSQNSLQSIPVGLKALT 521

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           SL ELDLS+NNI+ LPPELGLLEPSLQALRLDGNPLRSIRRT+LD+GTKAVL+YLKDK+P
Sbjct: 522 SLQELDLSNNNIAVLPPELGLLEPSLQALRLDGNPLRSIRRTVLDKGTKAVLQYLKDKLP 581

Query: 421 E 421
           E
Sbjct: 582 E 582



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 154/309 (49%), Gaps = 44/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           LSVL+LS+NSLS LP  IG++  L+ L ++ N       S+V             ++PE 
Sbjct: 70  LSVLNLSHNSLSQLPAAIGELPQLKMLDVSFN-------SIV-------------KIPEE 109

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
             S  S  K                L      L+ +PS +    E++ L  S N I  LP
Sbjct: 110 IGSAVSLVK----------------LDCSNNRLTELPSSLGRCLELSDLKGSNNLITNLP 153

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            +L++C+ L  L +  N++    + +++S + L+      N L  +P+     +  L  L
Sbjct: 154 EDLANCSKLSKLDMEGNRLTVMSENLISSWTMLTEFNSSKNLLNGIPT-SIGGLSRLIRL 212

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP- 353
           DL  N I+++P +        L ELYL    +   P +I  L +L  LDL  N L+  P 
Sbjct: 213 DLHQNRISAIPSS--IIGCHSLTELYLGNNNISTLPVEIGALSRLGTLDLHSNQLKDYPV 270

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           E  K   SL  LDLS+N++S LPPE+G +  +L+ L L GNP+R++R +++   T A+LK
Sbjct: 271 EACK--LSLLVLDLSNNSLSGLPPEMGKMT-TLRKLLLSGNPMRTLRSSLVSGPTPALLK 327

Query: 414 YLKDKIPEN 422
           +L+ ++ E+
Sbjct: 328 FLRSRLSED 336



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 186/414 (44%), Gaps = 57/414 (13%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L +LI + N +  + E + +L  L  L+L  N +  +P++I     L    +  N++  +
Sbjct: 47  LQKLILAHNSIASLKEDLRNLPFLSVLNLSHNSLSQLPAAIGELPQLKMLDVSFNSIVKI 106

Query: 85  PAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 142
           P E+G    L  LD  +N+L E    +  C L LS L  SNN ++ LP ++   + L KL
Sbjct: 107 PEEIGSAVSLVKLDCSNNRLTELPSSLGRC-LELSDLKGSNNLITNLPEDLANCSKLSKL 165

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--E 200
            + GN L  +  +L++  T                +E +++K  L  + T +   S+   
Sbjct: 166 DMEGNRLTVMSENLISSWTML--------------TEFNSSKNLLNGIPTSIGGLSRLIR 211

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L L    +SAIPS I     +T+L L  N+I  LP E+ + + L TL L  N++KD+P  
Sbjct: 212 LDLHQNRISAIPSSIIGCHSLTELYLGNNNISTLPVEIGALSRLGTLDLHSNQLKDYP-- 269

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-----IASLPENPPFSSLPH 315
           +     SL  L L NN L  +P +  K +  L+ L LS N      +SL   P  + L  
Sbjct: 270 VEACKLSLLVLDLSNNSLSGLPPEMGK-MTTLRKLLLSGNPMRTLRSSLVSGPTPALLKF 328

Query: 316 L------------------------------QELYLRRMQLREAPTDILRLQQLRILDLS 345
           L                              +EL +  + L   P+++    ++  L+LS
Sbjct: 329 LRSRLSEDEDSEAVTTTKEVITMATRLSISSKELSMEELGLSAVPSEVWESGEVIKLNLS 388

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           +NS+Q +P    +  SL  L LS N I   P  +     SL  L+LD NPLR I
Sbjct: 389 RNSIQELPVELSSCVSLQTLILSKNQIKDWPGSILKSLSSLSCLKLDNNPLRQI 442



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 15/135 (11%)

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDI------------PMLQILDLSYN-IASLP 305
           D IL +  +   L L N  L ++P + ++++              LQ L L++N IASL 
Sbjct: 2   DRILKAARASGSLNLSNRSLTEIPDEVYRNLEGLGGDDKWWEAAELQKLILAHNSIASLK 61

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
           E+    +LP L  L L    L + P  I  L QL++LD+S NS+  IPE   +  SL +L
Sbjct: 62  ED--LRNLPFLSVLNLSHNSLSQLPAAIGELPQLKMLDVSFNSIVKIPEEIGSAVSLVKL 119

Query: 366 DLSDNNISALPPELG 380
           D S+N ++ LP  LG
Sbjct: 120 DCSNNRLTELPSSLG 134


>gi|449431828|ref|XP_004133702.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
 gi|449478165|ref|XP_004155239.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
          Length = 583

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 317/422 (75%), Positives = 366/422 (86%), Gaps = 1/422 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++KLD+EGNKL V+S NLIASWT+LTEL ASKNLLN +PE IGSL RLIRL++ QN+I S
Sbjct: 162 LTKLDMEGNKLKVISKNLIASWTLLTELNASKNLLNELPENIGSLLRLIRLNVFQNKISS 221

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IP SI  CC+LAE YMGNN++S LP E+G LS LGTLDLHSNQLKEY VEAC+L L VLD
Sbjct: 222 IPPSIKDCCALAELYMGNNSVSTLPVEIGALSHLGTLDLHSNQLKEYPVEACKLHLLVLD 281

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           LSNNSLSGLPPEIGKMTTLRKLLLTGNP+RTLRSSLV+GPTPALL++LRSRLPENE  EA
Sbjct: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPIRTLRSSLVSGPTPALLRFLRSRLPENEGPEA 341

Query: 181 STTKE-DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           S+T+  D+ITMA R+S+TSKELSLEG  LSA+PSE+WE+ E+ KLDLS+NS QELP ELS
Sbjct: 342 SSTQRGDVITMAARMSITSKELSLEGQGLSAVPSEVWESSELMKLDLSKNSFQELPVELS 401

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           SC SLQTLILSRNKIKDWP AIL +L +L+CLKLDNNPL+Q+PSDGF+ +  LQ+LDLS 
Sbjct: 402 SCTSLQTLILSRNKIKDWPGAILKTLPNLTCLKLDNNPLKQIPSDGFQAVSKLQVLDLSG 461

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           NIA LPE+P FSSLP LQELYLRRM+L E P+ IL L+ +RILDLSQNS+Q +PE  KNL
Sbjct: 462 NIACLPEHPTFSSLPLLQELYLRRMRLHEVPSSILGLKHMRILDLSQNSIQLVPEELKNL 521

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
            +LTELDLSDNNIS LPP+L LLEPSLQ LRLDGNPLRSIRR IL++GTKA+L YLKDK+
Sbjct: 522 AALTELDLSDNNISLLPPQLSLLEPSLQVLRLDGNPLRSIRRAILEKGTKAILAYLKDKL 581

Query: 420 PE 421
            E
Sbjct: 582 AE 583



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 149/307 (48%), Gaps = 40/307 (13%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VL++S+N LS LP  IG++  L+ L ++ N L                     R+P+ 
Sbjct: 70  LAVLNVSHNKLSELPAAIGELPALKLLDVSFNSLM--------------------RIPDE 109

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
             S  S  K D                    +L  +P  +    +++ L  S NSI  LP
Sbjct: 110 IGSATSLVKFDC----------------SSNHLQELPGGLGRCSDLSDLKASNNSISSLP 153

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            EL++C+ L  L +  NK+K     ++ S + L+ L    N L ++P +    + ++++ 
Sbjct: 154 VELANCSKLTKLDMEGNKLKVISKNLIASWTLLTELNASKNLLNELPENIGSLLRLIRLN 213

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
                I+S+P  P       L ELY+    +   P +I  L  L  LDL  N L+  P  
Sbjct: 214 VFQNKISSIP--PSIKDCCALAELYMGNNSVSTLPVEIGALSHLGTLDLHSNQLKEYPVE 271

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
              L  L  LDLS+N++S LPPE+G +  +L+ L L GNP+R++R +++   T A+L++L
Sbjct: 272 ACKLHLLV-LDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPIRTLRSSLVSGPTPALLRFL 329

Query: 416 KDKIPEN 422
           + ++PEN
Sbjct: 330 RSRLPEN 336



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 187/413 (45%), Gaps = 54/413 (13%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L +LI + N +  + E + +LS L  L++  N++  +P++I    +L    +  N+L  +
Sbjct: 47  LQKLILAHNNIQLLSEELRNLSSLAVLNVSHNKLSELPAAIGELPALKLLDVSFNSLMRI 106

Query: 85  PAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 142
           P E+G  + L   D  SN L+E    +  C   LS L  SNNS+S LP E+   + L KL
Sbjct: 107 PDEIGSATSLVKFDCSSNHLQELPGGLGRCS-DLSDLKASNNSISSLPVELANCSKLTKL 165

Query: 143 LLTGNPLRTLRSSLVNGPT-------------------PALLKYLRSRLPENEDSEASTT 183
            + GN L+ +  +L+   T                    +LL+ +R  + +N+ S    +
Sbjct: 166 DMEGNKLKVISKNLIASWTLLTELNASKNLLNELPENIGSLLRLIRLNVFQNKISSIPPS 225

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA- 242
            +D   +A        EL +   ++S +P EI     +  LDL  N ++E P E  +C  
Sbjct: 226 IKDCCALA--------ELYMGNNSVSTLPVEIGALSHLGTLDLHSNQLKEYPVE--ACKL 275

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD-IPMLQILDLSYNI 301
            L  L LS N +   P  I   +++L  L L  NP+R + S       P L    L +  
Sbjct: 276 HLLVLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPIRTLRSSLVSGPTPAL----LRFLR 330

Query: 302 ASLPEN--PPFSSLPH-------------LQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
           + LPEN  P  SS                 +EL L    L   P+++    +L  LDLS+
Sbjct: 331 SRLPENEGPEASSTQRGDVITMAARMSITSKELSLEGQGLSAVPSEVWESSELMKLDLSK 390

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           NS Q +P    + TSL  L LS N I   P  +    P+L  L+LD NPL+ I
Sbjct: 391 NSFQELPVELSSCTSLQTLILSRNKIKDWPGAILKTLPNLTCLKLDNNPLKQI 443



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 15/135 (11%)

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM------------LQILDLSYN-IASLP 305
           D IL +  +   L L N  L  VPS+ ++ +              LQ L L++N I  L 
Sbjct: 2   DRILKAARASGSLNLSNRSLSDVPSEVYRSLDAVQADEKWWEAVELQKLILAHNNIQLLS 61

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
           E     +L  L  L +   +L E P  I  L  L++LD+S NSL  IP+   + TSL + 
Sbjct: 62  EE--LRNLSSLAVLNVSHNKLSELPAAIGELPALKLLDVSFNSLMRIPDEIGSATSLVKF 119

Query: 366 DLSDNNISALPPELG 380
           D S N++  LP  LG
Sbjct: 120 DCSSNHLQELPGGLG 134


>gi|255575336|ref|XP_002528571.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223532015|gb|EEF33826.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 571

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 304/398 (76%), Positives = 351/398 (88%), Gaps = 1/398 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++K+DVEGNKL   S NL+ASWTMLTEL ASKNLL  +P+ +GSLSRLIRLD HQN+I S
Sbjct: 161 LTKVDVEGNKLQTFSENLMASWTMLTELNASKNLLTCIPDNVGSLSRLIRLDFHQNKISS 220

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IP SI GCCSL EFYMGNN LS LPAE+G++S+L TLDLHSNQLKE+ VE C+L LSVLD
Sbjct: 221 IPPSIKGCCSLLEFYMGNNLLSTLPAEIGEVSRLATLDLHSNQLKEFPVEGCKLHLSVLD 280

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           LSNNSLSGLP EIG+MTTLRKLLLTGNPLRT+RSSLV+GPTPALL+YLRSRL E EDSEA
Sbjct: 281 LSNNSLSGLPLEIGRMTTLRKLLLTGNPLRTIRSSLVSGPTPALLRYLRSRLSEGEDSEA 340

Query: 181 STT-KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +T  ++D+I MA+RLS+++KEL L G+ LSA+PSE+WE+GEI K+DLS+NSIQ+LP ELS
Sbjct: 341 NTPPRKDVIAMASRLSISTKELFLVGLGLSAVPSEVWESGEIVKVDLSKNSIQKLPVELS 400

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           SC SLQTLILS+NKI++WP AIL SLS+LSCLKLDNNPLRQ+P DGF+ + MLQILDLS 
Sbjct: 401 SCVSLQTLILSKNKIQEWPGAILKSLSNLSCLKLDNNPLRQIPLDGFQAVSMLQILDLSG 460

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           N AS+ E PPFS LPHLQELYLR +QL E P+DIL L QLRILDLS+NSLQSIPEGFK+L
Sbjct: 461 NPASVCELPPFSKLPHLQELYLRHVQLHEVPSDILSLLQLRILDLSRNSLQSIPEGFKSL 520

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
           TSLTELDLSDN+I+ALPPELG LEPSLQALRLDGNPLR
Sbjct: 521 TSLTELDLSDNSIAALPPELGFLEPSLQALRLDGNPLR 558



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 187/414 (45%), Gaps = 55/414 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L+V  NKLT L    I   ++L  L  S N++  +P+ IGS + L++ D   N++  
Sbjct: 69  LTVLNVSNNKLTALPAA-IGELSLLKSLDVSFNMIQTVPDEIGSATSLVKFDCSSNQLKE 127

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSV 118
           +P S+  C  L+E  + NN +++ P +L K  KL  +D+  N+L+ +   + A    L+ 
Sbjct: 128 LPGSVGRCLDLSELKVSNNLITSFPEDLAKCLKLTKVDVEGNKLQTFSENLMASWTMLTE 187

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           L+ S N L+ +P  +G ++ L +L    N + ++  S + G    L  Y+ + L      
Sbjct: 188 LNASKNLLTCIPDNVGSLSRLIRLDFHQNKISSIPPS-IKGCCSLLEFYMGNNL------ 240

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                                        LS +P+EI E   +  LDL  N ++E P E 
Sbjct: 241 -----------------------------LSTLPAEIGEVSRLATLDLHSNQLKEFPVE- 270

Query: 239 SSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD--IPMLQIL 295
             C   L  L LS N +   P  I   +++L  L L  NPLR + S         +L+ L
Sbjct: 271 -GCKLHLSVLDLSNNSLSGLPLEI-GRMTTLRKLLLTGNPLRTIRSSLVSGPTPALLRYL 328

Query: 296 --DLSYNIASLPENPPFSSLPHL--------QELYLRRMQLREAPTDILRLQQLRILDLS 345
              LS    S    PP   +  +        +EL+L  + L   P+++    ++  +DLS
Sbjct: 329 RSRLSEGEDSEANTPPRKDVIAMASRLSISTKELFLVGLGLSAVPSEVWESGEIVKVDLS 388

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           +NS+Q +P    +  SL  L LS N I   P  +     +L  L+LD NPLR I
Sbjct: 389 KNSIQKLPVELSSCVSLQTLILSKNKIQEWPGAILKSLSNLSCLKLDNNPLRQI 442



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 155/309 (50%), Gaps = 44/309 (14%)

Query: 115 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           +L+VL++SNN L+ LP  IG+++ L+ L ++ N ++T+   +  G   +L+K+       
Sbjct: 68  QLTVLNVSNNKLTALPAAIGELSLLKSLDVSFNMIQTVPDEI--GSATSLVKF------- 118

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
             D  ++  KE                         +P  +    ++++L +S N I   
Sbjct: 119 --DCSSNQLKE-------------------------LPGSVGRCLDLSELKVSNNLITSF 151

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P +L+ C  L  + +  NK++ + + ++ S + L+ L    N L  +P D    +  L  
Sbjct: 152 PEDLAKCLKLTKVDVEGNKLQTFSENLMASWTMLTELNASKNLLTCIP-DNVGSLSRLIR 210

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           LD   N I+S+P  P       L E Y+    L   P +I  + +L  LDL  N L+  P
Sbjct: 211 LDFHQNKISSIP--PSIKGCCSLLEFYMGNNLLSTLPAEIGEVSRLATLDLHSNQLKEFP 268

Query: 354 -EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVL 412
            EG K    L+ LDLS+N++S LP E+G +  +L+ L L GNPLR+IR +++   T A+L
Sbjct: 269 VEGCK--LHLSVLDLSNNSLSGLPLEIGRMT-TLRKLLLTGNPLRTIRSSLVSGPTPALL 325

Query: 413 KYLKDKIPE 421
           +YL+ ++ E
Sbjct: 326 RYLRSRLSE 334



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 103/247 (41%), Gaps = 57/247 (23%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP-AELGKLSK 93
           L+ +P  +     ++++DL +N I  +P  +S C SL    +  N +   P A L  LS 
Sbjct: 369 LSAVPSEVWESGEIVKVDLSKNSIQKLPVELSSCVSLQTLILSKNKIQEWPGAILKSLSN 428

Query: 94  LGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
           L  L L +N L++  ++  Q                      ++ L+ L L+GNP     
Sbjct: 429 LSCLKLDNNPLRQIPLDGFQ---------------------AVSMLQILDLSGNP----- 462

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
           +S+   P  + L +L                              +EL L  + L  +PS
Sbjct: 463 ASVCELPPFSKLPHL------------------------------QELYLRHVQLHEVPS 492

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           +I    ++  LDLSRNS+Q +P    S  SL  L LS N I   P  +     SL  L+L
Sbjct: 493 DILSLLQLRILDLSRNSLQSIPEGFKSLTSLTELDLSDNSIAALPPELGFLEPSLQALRL 552

Query: 274 DNNPLRQ 280
           D NPLR+
Sbjct: 553 DGNPLRR 559


>gi|356544024|ref|XP_003540456.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Glycine
           max]
          Length = 586

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 327/421 (77%), Positives = 377/421 (89%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +SKLD+EGNKLTV+S NLI+SWTMLTE  ASKNLLNG+P +IG LSRLIR+ +HQNRI +
Sbjct: 163 LSKLDMEGNKLTVISENLISSWTMLTEFNASKNLLNGIPTSIGGLSRLIRVYVHQNRISA 222

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IPSSI GC SL E Y+GNN +S LP E+G LS+LGTLDLHSNQLK+Y VEAC+L L VLD
Sbjct: 223 IPSSIIGCHSLTELYLGNNNISTLPVEIGALSRLGTLDLHSNQLKDYPVEACKLSLLVLD 282

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           LSNNSLSGLPPE+GKMTTLRKLLL+GNP+RTLRSSLV+GPTPALLK+LRSRL E+EDSEA
Sbjct: 283 LSNNSLSGLPPEMGKMTTLRKLLLSGNPMRTLRSSLVSGPTPALLKFLRSRLSEDEDSEA 342

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
            TT +++I MATRLS+TSKELS+EG+ LSA+PSE+WE+GE+ KL+LSRNSIQELP ELSS
Sbjct: 343 VTTTKEVIAMATRLSITSKELSMEGLGLSAVPSEVWESGEVIKLNLSRNSIQELPVELSS 402

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
           C SLQTLILS+N+IK+WP +IL SLSSLSCLKLDNNPL+Q+P DGF+ +P LQILDLS N
Sbjct: 403 CVSLQTLILSKNQIKEWPGSILKSLSSLSCLKLDNNPLKQIPLDGFEVVPKLQILDLSGN 462

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
            ASL + P FSSLP+LQELYLRRM+L E P+DI+ LQQLRILDLSQNSLQSIP G K+LT
Sbjct: 463 AASLLDVPAFSSLPYLQELYLRRMRLSEVPSDIVGLQQLRILDLSQNSLQSIPVGLKDLT 522

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           SL ELDLS+NNIS L PELGLLEPSLQALRLDGNPLRSIRRT+LDRGTKAVL+YLKDK+P
Sbjct: 523 SLKELDLSNNNISVLLPELGLLEPSLQALRLDGNPLRSIRRTVLDRGTKAVLQYLKDKLP 582

Query: 421 E 421
           E
Sbjct: 583 E 583



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 152/308 (49%), Gaps = 42/308 (13%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VL+LS+NSLS LP  IG++  L+ L ++ N       S+VN             +PE 
Sbjct: 71  LAVLNLSHNSLSQLPAAIGELPQLKMLDVSFN-------SIVN-------------IPEE 110

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
             S  S  K                L      L+ +PS +    E++ L  S N I  LP
Sbjct: 111 IGSAMSLVK----------------LDCSNNQLTELPSSLGRCLELSDLKGSNNLITSLP 154

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            +L++C+ L  L +  NK+    + +++S + L+      N L  +P+       ++++ 
Sbjct: 155 EDLANCSKLSKLDMEGNKLTVISENLISSWTMLTEFNASKNLLNGIPTSIGGLSRLIRVY 214

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP-E 354
                I+++P +        L ELYL    +   P +I  L +L  LDL  N L+  P E
Sbjct: 215 VHQNRISAIPSS--IIGCHSLTELYLGNNNISTLPVEIGALSRLGTLDLHSNQLKDYPVE 272

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
             K   SL  LDLS+N++S LPPE+G +  +L+ L L GNP+R++R +++   T A+LK+
Sbjct: 273 ACK--LSLLVLDLSNNSLSGLPPEMGKMT-TLRKLLLSGNPMRTLRSSLVSGPTPALLKF 329

Query: 415 LKDKIPEN 422
           L+ ++ E+
Sbjct: 330 LRSRLSED 337



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 185/414 (44%), Gaps = 57/414 (13%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L +LI + N +  + E + +L  L  L+L  N +  +P++I     L    +  N++  +
Sbjct: 48  LQKLILAHNSIASLKEDLRNLPFLAVLNLSHNSLSQLPAAIGELPQLKMLDVSFNSIVNI 107

Query: 85  PAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 142
           P E+G    L  LD  +NQL E    +  C L LS L  SNN ++ LP ++   + L KL
Sbjct: 108 PEEIGSAMSLVKLDCSNNQLTELPSSLGRC-LELSDLKGSNNLITSLPEDLANCSKLSKL 166

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--E 200
            + GN L  +  +L++  T                +E + +K  L  + T +   S+   
Sbjct: 167 DMEGNKLTVISENLISSWTML--------------TEFNASKNLLNGIPTSIGGLSRLIR 212

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           + +    +SAIPS I     +T+L L  N+I  LP E+ + + L TL L  N++KD+P  
Sbjct: 213 VYVHQNRISAIPSSIIGCHSLTELYLGNNNISTLPVEIGALSRLGTLDLHSNQLKDYP-- 270

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-----IASLPENPPFSSLPH 315
           +     SL  L L NN L  +P +  K +  L+ L LS N      +SL   P  + L  
Sbjct: 271 VEACKLSLLVLDLSNNSLSGLPPEMGK-MTTLRKLLLSGNPMRTLRSSLVSGPTPALLKF 329

Query: 316 L------------------------------QELYLRRMQLREAPTDILRLQQLRILDLS 345
           L                              +EL +  + L   P+++    ++  L+LS
Sbjct: 330 LRSRLSEDEDSEAVTTTKEVIAMATRLSITSKELSMEGLGLSAVPSEVWESGEVIKLNLS 389

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           +NS+Q +P    +  SL  L LS N I   P  +     SL  L+LD NPL+ I
Sbjct: 390 RNSIQELPVELSSCVSLQTLILSKNQIKEWPGSILKSLSSLSCLKLDNNPLKQI 443



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 74/130 (56%), Gaps = 5/130 (3%)

Query: 51  LDLHQN--RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 108
           LDL  N   +L +P+  S    L E Y+    LS +P+++  L +L  LDL  N L+   
Sbjct: 457 LDLSGNAASLLDVPA-FSSLPYLQELYLRRMRLSEVPSDIVGLQQLRILDLSQNSLQSIP 515

Query: 109 VEACQL-RLSVLDLSNNSLS-GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           V    L  L  LDLSNN++S  LP       +L+ L L GNPLR++R ++++  T A+L+
Sbjct: 516 VGLKDLTSLKELDLSNNNISVLLPELGLLEPSLQALRLDGNPLRSIRRTVLDRGTKAVLQ 575

Query: 167 YLRSRLPENE 176
           YL+ +LPE E
Sbjct: 576 YLKDKLPEQE 585



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 16/136 (11%)

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML-------------QILDLSYN-IASL 304
           D +L +  +   L L N  L ++P + ++++  L             Q L L++N IASL
Sbjct: 2   DRLLKAARASGSLNLSNRSLTEIPDEVYRNLEGLGGGDDKWWEAVELQKLILAHNSIASL 61

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
            E+    +LP L  L L    L + P  I  L QL++LD+S NS+ +IPE   +  SL +
Sbjct: 62  KED--LRNLPFLAVLNLSHNSLSQLPAAIGELPQLKMLDVSFNSIVNIPEEIGSAMSLVK 119

Query: 365 LDLSDNNISALPPELG 380
           LD S+N ++ LP  LG
Sbjct: 120 LDCSNNQLTELPSSLG 135


>gi|297830120|ref|XP_002882942.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328782|gb|EFH59201.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 584

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 304/422 (72%), Positives = 358/422 (84%), Gaps = 1/422 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +SKLDVEGN+LT LS N IASWTMLTEL ASKN+L+G+P+ IGSLSRLIRLDLHQN+ILS
Sbjct: 162 LSKLDVEGNRLTALSENHIASWTMLTELNASKNMLSGLPQNIGSLSRLIRLDLHQNKILS 221

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P SI  C SL EFY+G N+LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LD
Sbjct: 222 VPPSIGDCSSLVEFYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLD 281

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           LSNNSL+GL PE+G MTTLRKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ A
Sbjct: 282 LSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSA 341

Query: 181 ST-TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           ST TKE++I  A R+S++SKELSLEG+NLSA+PSE+WE+GEITK++LS+NSI+ELP +LS
Sbjct: 342 STPTKENVIASAARMSISSKELSLEGLNLSAVPSEVWESGEITKVNLSKNSIEELPAQLS 401

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  SLQTLILSRNKIKDWP AIL SL +L CLKLDNNPL Q+P DGF+ +  L+ILDLS 
Sbjct: 402 TSVSLQTLILSRNKIKDWPGAILKSLPNLVCLKLDNNPLTQIPLDGFQAVSGLRILDLSG 461

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           N  S  E+P F  LP LQELYL R+QL E P DIL L  L ILDL+QNSLQSIP+  KN+
Sbjct: 462 NAVSFREHPKFCHLPQLQELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKSIKNM 521

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           TSL  LD+S+NNIS+LPPELGLLEP+L+ LRLDGNPLRSIRR IL+RGTKAVL YLKD++
Sbjct: 522 TSLKHLDISNNNISSLPPELGLLEPTLEVLRLDGNPLRSIRRPILERGTKAVLNYLKDRL 581

Query: 420 PE 421
           P+
Sbjct: 582 PD 583



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 152/373 (40%), Gaps = 87/373 (23%)

Query: 48  LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 107
           L +L L  N I  +   +     L    + +N LS LPA +G+L+ + +LD+  N + E 
Sbjct: 47  LQKLILAHNDIAVLREDLKNLACLVVLNVSHNNLSQLPAAIGELTAMKSLDVSFNSITEL 106

Query: 108 CVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
             +    + L  LD S+N    LP  IG+   L  L  + N + +L   +VN    + L 
Sbjct: 107 PEQIGSAISLVKLDCSSNRFKELPESIGRCLDLSDLKASNNQISSLPEDMVNCSKLSKLD 166

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
              +RL        +   E+ I   T L+    EL+     LS +P  I     + +LDL
Sbjct: 167 VEGNRL--------TALSENHIASWTMLT----ELNASKNMLSGLPQNIGSLSRLIRLDL 214

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
            +N I  +PP +  C+SL    L  N +   P A +  LS L  L L +N L++ P    
Sbjct: 215 HQNKILSVPPSIGDCSSLVEFYLGINSLSTLP-AEIGDLSRLGTLDLRSNQLKEYPVGAC 273

Query: 287 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
           K       L LSY                                          LDLS 
Sbjct: 274 K-------LKLSY------------------------------------------LDLSN 284

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDR 406
           NSL                       + L PELG +  +L+ L L GNPLR++R ++++ 
Sbjct: 285 NSL-----------------------TGLHPELGNMT-TLRKLVLVGNPLRTLRSSLVNG 320

Query: 407 GTKAVLKYLKDKI 419
            T A+LKYL+ ++
Sbjct: 321 PTAALLKYLRSRL 333



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 15/135 (11%)

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM------------LQILDLSYN-IASLP 305
           D IL +  +   L L N  L+ VP + ++ +              LQ L L++N IA L 
Sbjct: 2   DRILKAARTSGSLNLSNRSLKDVPIEVYQCLETTGEGENWWEAVDLQKLILAHNDIAVLR 61

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
           E+    +L  L  L +    L + P  I  L  ++ LD+S NS+  +PE   +  SL +L
Sbjct: 62  ED--LKNLACLVVLNVSHNNLSQLPAAIGELTAMKSLDVSFNSITELPEQIGSAISLVKL 119

Query: 366 DLSDNNISALPPELG 380
           D S N    LP  +G
Sbjct: 120 DCSSNRFKELPESIG 134


>gi|30683597|ref|NP_188160.2| leucine-rich repeat-containing protein [Arabidopsis thaliana]
 gi|21703129|gb|AAM74505.1| AT3g15410/MJK13_7 [Arabidopsis thaliana]
 gi|24111377|gb|AAN46812.1| At3g15410/MJK13_7 [Arabidopsis thaliana]
 gi|332642149|gb|AEE75670.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
          Length = 584

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 302/422 (71%), Positives = 354/422 (83%), Gaps = 1/422 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +SKLDVEGNKLT LS N IASWTML EL A KN+L  +P+ IGSLSRLIRLDLHQN+I S
Sbjct: 162 LSKLDVEGNKLTALSENHIASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISS 221

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P SI GC SL EFY+G N+LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LD
Sbjct: 222 VPPSIGGCSSLVEFYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLD 281

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           LSNNSL+GL PE+G MTTLRKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ A
Sbjct: 282 LSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSA 341

Query: 181 ST-TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           ST TKE++I  A R+S++SKELSLEG+NLS +PSE+WE+GEITK++LS+NSI+ELP +LS
Sbjct: 342 STPTKENVIASAARMSISSKELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLS 401

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  SLQTLILSRNKIKDWP AIL SL +L CLKLDNNPL Q+P DGF+ +  LQILDLS 
Sbjct: 402 TSVSLQTLILSRNKIKDWPGAILKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSV 461

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           N  S  E+P F  LP L+ELYL R+QL E P DIL L  L ILDL+QNSLQSIP+G KN+
Sbjct: 462 NAVSFREHPKFCHLPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNM 521

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           TSL  LD+S+NNIS+LPPELGLLEP+L+ LRLDGNPLRSIRR IL+RGTKAVL YLKD++
Sbjct: 522 TSLKHLDISNNNISSLPPELGLLEPTLEVLRLDGNPLRSIRRPILERGTKAVLNYLKDRL 581

Query: 420 PE 421
           P+
Sbjct: 582 PD 583



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 163/397 (41%), Gaps = 112/397 (28%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L +LI + N +  + E + +L+ L+ L++  N++  +P++I    ++    +  N++S L
Sbjct: 47  LQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISEL 106

Query: 85  PAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 142
           P ++G    L  LD  SN+LKE    +  C L LS L  +NN +S LP ++   + L KL
Sbjct: 107 PEQIGSAISLVKLDCSSNRLKELPDSIGRC-LDLSDLKATNNQISSLPEDMVNCSKLSKL 165

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 202
            + GN L  L                                E+ I   T L+    EL+
Sbjct: 166 DVEGNKLTAL-------------------------------SENHIASWTMLA----ELN 190

Query: 203 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 262
                L  +P  I     + +LDL +N I  +PP +  C+SL    L  N +   P A +
Sbjct: 191 ACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGINSLSTLP-AEI 249

Query: 263 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLR 322
             LS L  L L +N L++ P    K       L LSY                       
Sbjct: 250 GDLSRLGTLDLRSNQLKEYPVGACK-------LKLSY----------------------- 279

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
                              LDLS NSL                       + L PELG +
Sbjct: 280 -------------------LDLSNNSL-----------------------TGLHPELGNM 297

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
             +L+ L L GNPLR++R ++++  T A+LKYL+ ++
Sbjct: 298 T-TLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRL 333


>gi|334185371|ref|NP_001189901.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
 gi|332642150|gb|AEE75671.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 302/422 (71%), Positives = 354/422 (83%), Gaps = 1/422 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +SKLDVEGNKLT LS N IASWTML EL A KN+L  +P+ IGSLSRLIRLDLHQN+I S
Sbjct: 168 LSKLDVEGNKLTALSENHIASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISS 227

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P SI GC SL EFY+G N+LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LD
Sbjct: 228 VPPSIGGCSSLVEFYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLD 287

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           LSNNSL+GL PE+G MTTLRKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ A
Sbjct: 288 LSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSA 347

Query: 181 ST-TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           ST TKE++I  A R+S++SKELSLEG+NLS +PSE+WE+GEITK++LS+NSI+ELP +LS
Sbjct: 348 STPTKENVIASAARMSISSKELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLS 407

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  SLQTLILSRNKIKDWP AIL SL +L CLKLDNNPL Q+P DGF+ +  LQILDLS 
Sbjct: 408 TSVSLQTLILSRNKIKDWPGAILKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSV 467

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           N  S  E+P F  LP L+ELYL R+QL E P DIL L  L ILDL+QNSLQSIP+G KN+
Sbjct: 468 NAVSFREHPKFCHLPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNM 527

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           TSL  LD+S+NNIS+LPPELGLLEP+L+ LRLDGNPLRSIRR IL+RGTKAVL YLKD++
Sbjct: 528 TSLKHLDISNNNISSLPPELGLLEPTLEVLRLDGNPLRSIRRPILERGTKAVLNYLKDRL 587

Query: 420 PE 421
           P+
Sbjct: 588 PD 589



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 185/412 (44%), Gaps = 57/412 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L+V  NKL+ L    I   T +  L  S N ++ +PE IGS   L++LD   NR+  +P 
Sbjct: 79  LNVSHNKLSQLPA-AIGELTAMKSLDVSFNSISELPEQIGSAISLVKLDCSSNRLKELPD 137

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDL 121
           SI  C  L++    NN +S+LP ++   SKL  LD+  N+L        A    L+ L+ 
Sbjct: 138 SIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSENHIASWTMLAELNA 197

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
             N L  LP  IG ++ L +L L  N + ++  S+  G   +L+++              
Sbjct: 198 CKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSI--GGCSSLVEFY------------- 242

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
                       L + S         LS +P+EI +   +  LDL  N ++E P  + +C
Sbjct: 243 ------------LGINS---------LSTLPAEIGDLSRLGTLDLRSNQLKEYP--VGAC 279

Query: 242 A-SLQTLILSRNKIKD-WPDAILTSLSSLSCLKLDNNPLRQV-------PSDGFKDIPML 292
              L  L LS N +    P+  L ++++L  L L  NPLR +       P+         
Sbjct: 280 KLKLSYLDLSNNSLTGLHPE--LGNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRS 337

Query: 293 QILDLSYNIASLP--ENPPFSSLP---HLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           ++ +     AS P  EN   S+       +EL L  + L + P+++    ++  ++LS+N
Sbjct: 338 RLSNSEETSASTPTKENVIASAARMSISSKELSLEGLNLSDVPSEVWESGEITKVNLSKN 397

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           S++ +P       SL  L LS N I   P  +    P+L  L+LD NPL  I
Sbjct: 398 SIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPNLMCLKLDNNPLNQI 449



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 163/397 (41%), Gaps = 112/397 (28%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L +LI + N +  + E + +L+ L+ L++  N++  +P++I    ++    +  N++S L
Sbjct: 53  LQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISEL 112

Query: 85  PAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 142
           P ++G    L  LD  SN+LKE    +  C L LS L  +NN +S LP ++   + L KL
Sbjct: 113 PEQIGSAISLVKLDCSSNRLKELPDSIGRC-LDLSDLKATNNQISSLPEDMVNCSKLSKL 171

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 202
            + GN L  L                                E+ I   T L+    EL+
Sbjct: 172 DVEGNKLTAL-------------------------------SENHIASWTMLA----ELN 196

Query: 203 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 262
                L  +P  I     + +LDL +N I  +PP +  C+SL    L  N +   P A +
Sbjct: 197 ACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGINSLSTLP-AEI 255

Query: 263 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLR 322
             LS L  L L +N L++ P    K       L LSY                       
Sbjct: 256 GDLSRLGTLDLRSNQLKEYPVGACK-------LKLSY----------------------- 285

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
                              LDLS NSL                       + L PELG +
Sbjct: 286 -------------------LDLSNNSL-----------------------TGLHPELGNM 303

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
             +L+ L L GNPLR++R ++++  T A+LKYL+ ++
Sbjct: 304 T-TLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRL 339


>gi|1946300|emb|CAA73132.1| hypothetical protein [Silene latifolia]
          Length = 581

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 296/418 (70%), Positives = 359/418 (85%), Gaps = 1/418 (0%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           K+D+EGNKLT L + ++ SW+ML+EL ASKNLL G+PETIG+L RLIRLDLHQNRI SIP
Sbjct: 164 KVDIEGNKLTTLLDPVVGSWSMLSELNASKNLLTGLPETIGTLVRLIRLDLHQNRIKSIP 223

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 122
           SSI GC SL EF++G+N LS+LP+ELG+LS+L  LDL SNQL EY  EAC+LRLSVLDLS
Sbjct: 224 SSIKGCSSLVEFFIGSNLLSSLPSELGELSQLSVLDLRSNQLTEYPAEACKLRLSVLDLS 283

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NNSLSGLP EIG MT+LRKL+L GNP+RT+RS+LV GPT ALLKYLR RLP  E+++  T
Sbjct: 284 NNSLSGLPAEIGLMTSLRKLVLIGNPMRTIRSTLVTGPTAALLKYLRGRLPSAEEAQVMT 343

Query: 183 -TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
            +K++++ MA+RLS+T+KELSL GM L A+P E+ E+ EITK+DLS+NSIQELP  LS+C
Sbjct: 344 PSKDNMVAMASRLSITTKELSLVGMGLIAVPPEVCESNEITKVDLSKNSIQELPVTLSAC 403

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
           +SL+ LILSRNKIKDWP+  L SL +L+CL+LDNNPL +VP +GF  +P LQILDLS  +
Sbjct: 404 SSLEVLILSRNKIKDWPEDALKSLPNLTCLRLDNNPLNKVPLNGFDAVPRLQILDLSGCV 463

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
           +SL +NP F+SL HL ELYLRR++L+E P+DIL L++L+ILDLSQNSL SIP+GF+NLTS
Sbjct: 464 SSLVDNPAFASLQHLVELYLRRVKLQEVPSDILMLRKLQILDLSQNSLHSIPQGFQNLTS 523

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           LTELDLSDN+I  LPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVL+YLKDKI
Sbjct: 524 LTELDLSDNSIGTLPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLQYLKDKI 581



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 187/417 (44%), Gaps = 61/417 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L+V  NKLT L    I     L  L  S NLL  +P  IGS + L+++D   N++  
Sbjct: 70  LTVLNVSHNKLTQLPAA-IGELPSLKSLDVSFNLLTNIPAEIGSATSLVKMDCSNNQLKE 128

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSV 118
           +PSS+  C  LAE    NN + +LP +L   +KL  +D+  N+L      V      LS 
Sbjct: 129 LPSSLGQCLDLAELKASNNLIGSLPDDLAYCTKLLKVDIEGNKLTTLLDPVVGSWSMLSE 188

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           L+ S N L+GLP  IG +  L +L L  N ++++ SS + G +  +  ++ S L      
Sbjct: 189 LNASKNLLTGLPETIGTLVRLIRLDLHQNRIKSIPSS-IKGCSSLVEFFIGSNL------ 241

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                                        LS++PSE+ E  +++ LDL  N + E P E 
Sbjct: 242 -----------------------------LSSLPSELGELSQLSVLDLRSNQLTEYPAE- 271

Query: 239 SSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
            +C   L  L LS N +   P A +  ++SL  L L  NP+R + S      P   +  L
Sbjct: 272 -ACKLRLSVLDLSNNSLSGLP-AEIGLMTSLRKLVLIGNPMRTIRSTLVTG-PTAAL--L 326

Query: 298 SYNIASLPE-------NPPFSSLPHL--------QELYLRRMQLREAPTDILRLQQLRIL 342
            Y    LP         P   ++  +        +EL L  M L   P ++    ++  +
Sbjct: 327 KYLRGRLPSAEEAQVMTPSKDNMVAMASRLSITTKELSLVGMGLIAVPPEVCESNEITKV 386

Query: 343 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           DLS+NS+Q +P      +SL  L LS N I   P +     P+L  LRLD NPL  +
Sbjct: 387 DLSKNSIQELPVTLSACSSLEVLILSRNKIKDWPEDALKSLPNLTCLRLDNNPLNKV 443



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 146/306 (47%), Gaps = 42/306 (13%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VL++S+N L+ LP  IG++ +L+ L ++ N                    L + +P  
Sbjct: 70  LTVLNVSHNKLTQLPAAIGELPSLKSLDVSFN--------------------LLTNIPAE 109

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
             S  S  K D                     L  +PS + +  ++ +L  S N I  LP
Sbjct: 110 IGSATSLVKMDC----------------SNNQLKELPSSLGQCLDLAELKASNNLIGSLP 153

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            +L+ C  L  + +  NK+    D ++ S S LS L    N L  +P +    +  L  L
Sbjct: 154 DDLAYCTKLLKVDIEGNKLTTLLDPVVGSWSMLSELNASKNLLTGLP-ETIGTLVRLIRL 212

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           DL  N I S+P +        L E ++    L   P+++  L QL +LDL  N L   P 
Sbjct: 213 DLHQNRIKSIPSS--IKGCSSLVEFFIGSNLLSSLPSELGELSQLSVLDLRSNQLTEYPA 270

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
               L  L+ LDLS+N++S LP E+GL+  SL+ L L GNP+R+IR T++   T A+LKY
Sbjct: 271 EACKL-RLSVLDLSNNSLSGLPAEIGLMT-SLRKLVLIGNPMRTIRSTLVTGPTAALLKY 328

Query: 415 LKDKIP 420
           L+ ++P
Sbjct: 329 LRGRLP 334



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 15/135 (11%)

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM------------LQILDLSYN-IASLP 305
           D +L +  +   L L N  LR VP + +K+               LQ L L++N I  L 
Sbjct: 2   DRLLKAARTSGSLNLSNRSLRDVPIEVYKNFDGAPEGENWWETVDLQKLILAHNNIEVLK 61

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
           E+    +LP L  L +   +L + P  I  L  L+ LD+S N L +IP    + TSL ++
Sbjct: 62  ED--LKNLPLLTVLNVSHNKLTQLPAAIGELPSLKSLDVSFNLLTNIPAEIGSATSLVKM 119

Query: 366 DLSDNNISALPPELG 380
           D S+N +  LP  LG
Sbjct: 120 DCSNNQLKELPSSLG 134


>gi|15795106|dbj|BAB02370.1| leucine-rich repeat protein; contains similarity to
           elicitor-inducible receptor EIR [Arabidopsis thaliana]
          Length = 594

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 303/432 (70%), Positives = 355/432 (82%), Gaps = 11/432 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +SKLDVEGNKLT LS N IASWTML EL A KN+L  +P+ IGSLSRLIRLDLHQN+I S
Sbjct: 162 LSKLDVEGNKLTALSENHIASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISS 221

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P SI GC SL EFY+G N+LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LD
Sbjct: 222 VPPSIGGCSSLVEFYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLD 281

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           LSNNSL+GL PE+G MTTLRKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ A
Sbjct: 282 LSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSA 341

Query: 181 ST-TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           ST TKE++I  A R+S++SKELSLEG+NLS +PSE+WE+GEITK++LS+NSI+ELP +LS
Sbjct: 342 STPTKENVIASAARMSISSKELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLS 401

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  SLQTLILSRNKIKDWP AIL SL +L CLKLDNNPL Q+P DGF+ +  LQILDLS 
Sbjct: 402 TSVSLQTLILSRNKIKDWPGAILKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSV 461

Query: 300 NIASLPENPPFSSLPHLQELYLR----------RMQLREAPTDILRLQQLRILDLSQNSL 349
           N  S  E+P F  LP L+ELYLR          R+QL E P DIL L  L ILDL+QNSL
Sbjct: 462 NAVSFREHPKFCHLPQLRELYLRYRIPYTSLDSRIQLSEVPEDILNLSNLIILDLNQNSL 521

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTK 409
           QSIP+G KN+TSL  LD+S+NNIS+LPPELGLLEP+L+ LRLDGNPLRSIRR IL+RGTK
Sbjct: 522 QSIPKGIKNMTSLKHLDISNNNISSLPPELGLLEPTLEVLRLDGNPLRSIRRPILERGTK 581

Query: 410 AVLKYLKDKIPE 421
           AVL YLKD++P+
Sbjct: 582 AVLNYLKDRLPD 593



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 185/412 (44%), Gaps = 57/412 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L+V  NKL+ L    I   T +  L  S N ++ +PE IGS   L++LD   NR+  +P 
Sbjct: 73  LNVSHNKLSQLPA-AIGELTAMKSLDVSFNSISELPEQIGSAISLVKLDCSSNRLKELPD 131

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDL 121
           SI  C  L++    NN +S+LP ++   SKL  LD+  N+L        A    L+ L+ 
Sbjct: 132 SIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSENHIASWTMLAELNA 191

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
             N L  LP  IG ++ L +L L  N + ++  S+  G   +L+++              
Sbjct: 192 CKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSI--GGCSSLVEFY------------- 236

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
                       L + S         LS +P+EI +   +  LDL  N ++E P  + +C
Sbjct: 237 ------------LGINS---------LSTLPAEIGDLSRLGTLDLRSNQLKEYP--VGAC 273

Query: 242 A-SLQTLILSRNKIKD-WPDAILTSLSSLSCLKLDNNPLRQV-------PSDGFKDIPML 292
              L  L LS N +    P+  L ++++L  L L  NPLR +       P+         
Sbjct: 274 KLKLSYLDLSNNSLTGLHPE--LGNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRS 331

Query: 293 QILDLSYNIASLP--ENPPFSSLP---HLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           ++ +     AS P  EN   S+       +EL L  + L + P+++    ++  ++LS+N
Sbjct: 332 RLSNSEETSASTPTKENVIASAARMSISSKELSLEGLNLSDVPSEVWESGEITKVNLSKN 391

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           S++ +P       SL  L LS N I   P  +    P+L  L+LD NPL  I
Sbjct: 392 SIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPNLMCLKLDNNPLNQI 443



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 163/397 (41%), Gaps = 112/397 (28%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L +LI + N +  + E + +L+ L+ L++  N++  +P++I    ++    +  N++S L
Sbjct: 47  LQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISEL 106

Query: 85  PAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 142
           P ++G    L  LD  SN+LKE    +  C L LS L  +NN +S LP ++   + L KL
Sbjct: 107 PEQIGSAISLVKLDCSSNRLKELPDSIGRC-LDLSDLKATNNQISSLPEDMVNCSKLSKL 165

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 202
            + GN L  L                                E+ I   T L+    EL+
Sbjct: 166 DVEGNKLTAL-------------------------------SENHIASWTMLA----ELN 190

Query: 203 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 262
                L  +P  I     + +LDL +N I  +PP +  C+SL    L  N +   P A +
Sbjct: 191 ACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGINSLSTLP-AEI 249

Query: 263 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLR 322
             LS L  L L +N L++ P    K       L LSY                       
Sbjct: 250 GDLSRLGTLDLRSNQLKEYPVGACK-------LKLSY----------------------- 279

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
                              LDLS NSL                       + L PELG +
Sbjct: 280 -------------------LDLSNNSL-----------------------TGLHPELGNM 297

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
             +L+ L L GNPLR++R ++++  T A+LKYL+ ++
Sbjct: 298 T-TLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRL 333


>gi|2760084|emb|CAA76000.1| leucine-rich repeat protein [Arabidopsis thaliana]
          Length = 584

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 300/422 (71%), Positives = 351/422 (83%), Gaps = 1/422 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +SKLDVE NKLT LS N IASWTML EL A KN+L  +P+ IGSLSRLIRLDLHQN+I S
Sbjct: 162 LSKLDVEXNKLTALSENHIASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISS 221

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P SI GC SL EFY+G N+LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LD
Sbjct: 222 VPPSIGGCSSLVEFYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLD 281

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           LSNNSL+GL PE+G MTTLRKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ A
Sbjct: 282 LSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSA 341

Query: 181 ST-TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           ST TKE++I  A R+S++SKELSLEG+NLS +PSE+WE+GEITK++LS+NSI+ELP +LS
Sbjct: 342 STPTKENVIASAARMSISSKELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLS 401

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  SLQTLILSRNKIKDWP AIL SL +  CLKLDNNPL Q+P DGF+ I  LQILDLS 
Sbjct: 402 TSVSLQTLILSRNKIKDWPGAILKSLPNPMCLKLDNNPLNQIPLDGFQVISGLQILDLSV 461

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           N  S  E+P F  LP L+ELYL R+QL E P DIL L  L ILDL+QNSLQSIP+G KN+
Sbjct: 462 NAVSFREHPKFCHLPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNM 521

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           TSL  LD+S+NNIS+LPPELG LEP+L+ LRLDGNPLRSIRR IL+RGTKAVL YLKD++
Sbjct: 522 TSLKHLDISNNNISSLPPELGXLEPTLEVLRLDGNPLRSIRRPILERGTKAVLNYLKDRL 581

Query: 420 PE 421
           P+
Sbjct: 582 PD 583



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 162/397 (40%), Gaps = 112/397 (28%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L +LI + N +  + E + +L+ L+ L++  N++  +P++I    ++    +  N++S L
Sbjct: 47  LQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISEL 106

Query: 85  PAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 142
           P ++G    L  LD  SN+LKE    +  C L LS L  +NN +S LP ++   + L KL
Sbjct: 107 PEQIGSAISLVKLDCSSNRLKELPDSIGRC-LDLSDLKATNNQISSLPEDMVNCSKLSKL 165

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 202
            +  N L  L                                E+ I   T L+    EL+
Sbjct: 166 DVEXNKLTAL-------------------------------SENHIASWTMLA----ELN 190

Query: 203 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 262
                L  +P  I     + +LDL +N I  +PP +  C+SL    L  N +   P A +
Sbjct: 191 ACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGINSLSTLP-AEI 249

Query: 263 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLR 322
             LS L  L L +N L++ P    K       L LSY                       
Sbjct: 250 GDLSRLGTLDLRSNQLKEYPVGACK-------LKLSY----------------------- 279

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
                              LDLS NSL                       + L PELG +
Sbjct: 280 -------------------LDLSNNSL-----------------------TGLHPELGNM 297

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
             +L+ L L GNPLR++R ++++  T A+LKYL+ ++
Sbjct: 298 T-TLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRL 333


>gi|2760086|emb|CAA76001.1| leucine-rich repeat protein [Arabidopsis thaliana]
          Length = 584

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 298/422 (70%), Positives = 351/422 (83%), Gaps = 1/422 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +SKLDVEGNKLT LS N IASWTML E  A K++L  +P+ IGSLSRLIR D HQN+I S
Sbjct: 162 LSKLDVEGNKLTALSENHIASWTMLAEPNACKDMLGVLPQNIGSLSRLIRPDPHQNKISS 221

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P SI GC SL EFY+G N+LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LD
Sbjct: 222 VPPSIGGCSSLVEFYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLD 281

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           LSNNSL+GL PE+G MTTLRKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ A
Sbjct: 282 LSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSA 341

Query: 181 ST-TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           ST TKE++I  A R+S++SKELSLEG+NLS +PSE+WE+GEITK++LS+NSI+ELP +LS
Sbjct: 342 STPTKENVIASAARMSISSKELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLS 401

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  SLQTLILSRNKIKDWP AIL SL +L CLKLDNNPL Q+P DGF+ +  LQILDLS 
Sbjct: 402 TSVSLQTLILSRNKIKDWPGAILKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSV 461

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           N  S  E+P F  LP L+ELYL R+QL E P DIL L  L ILDL+QNSLQSIP+G KN+
Sbjct: 462 NAVSFREHPKFCHLPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNM 521

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           TSL  LD+S+NNIS+LPPELGLLEP+L+ LRLDGNPLRSIRR IL+RGTKAVL YLKD++
Sbjct: 522 TSLKHLDISNNNISSLPPELGLLEPTLEVLRLDGNPLRSIRRPILERGTKAVLNYLKDRL 581

Query: 420 PE 421
           P+
Sbjct: 582 PD 583



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 190/402 (47%), Gaps = 32/402 (7%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L +LI + N +  + E + +L+ L+ L++  N++  +P++I    ++    +  N++S L
Sbjct: 47  LQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISEL 106

Query: 85  PAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 142
           P ++G    L  LD  SN+LKE    +  C L LS L  +NN +S LP ++   + L KL
Sbjct: 107 PEQIGSAISLVKLDCSSNRLKELPDSIGRC-LDLSDLKATNNQISSLPEDMVNCSKLSKL 165

Query: 143 LLTGNPLRTLRSSLVNGPT----PALLKYLRSRLPENEDSEASTTKED-----LITMATR 193
            + GN L  L  + +   T    P   K +   LP+N  S +   + D     + ++   
Sbjct: 166 DVEGNKLTALSENHIASWTMLAEPNACKDMLGVLPQNIGSLSRLIRPDPHQNKISSVPPS 225

Query: 194 LSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA-SLQTLILS 250
           +   S   E  L   +LS +P+EI +   +  LDL  N ++E P  + +C   L  L LS
Sbjct: 226 IGGCSSLVEFYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYP--VGACKLKLSYLDLS 283

Query: 251 RNKIKD-WPDAILTSLSSLSCLKLDNNPLRQV-------PSDGFKDIPMLQILDLSYNIA 302
            N +    P+  L ++++L  L L  NPLR +       P+         ++ +     A
Sbjct: 284 NNSLTGLHPE--LGNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSA 341

Query: 303 SLP--ENPPFSSLP---HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
           S P  EN   S+       +EL L  + L + P+++    ++  ++LS+NS++ +P    
Sbjct: 342 STPTKENVIASAARMSISSKELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLS 401

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
              SL  L LS N I   P  +    P+L  L+LD NPL  I
Sbjct: 402 TSVSLQTLILSRNKIKDWPGAILKSLPNLMCLKLDNNPLNQI 443



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 137/339 (40%), Gaps = 112/339 (33%)

Query: 186 DLITMATRLSVTSKELSLEGMNLSAIPSEI-------------WEAGEITK--------- 223
           D I  A R   TS  L+L   +L  +P+E+             WEA ++ K         
Sbjct: 2   DRILKAAR---TSGSLNLSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIE 58

Query: 224 -------------------------------------LDLSRNSIQELPPELSSCASLQT 246
                                                LD+S NSI ELP ++ S  SL  
Sbjct: 59  VLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQIGSAISLVK 118

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD---------- 296
           L  S N++K+ PD+I   L  LS LK  NN +  +P D   +   L  LD          
Sbjct: 119 LDCSSNRLKELPDSIGRCL-DLSDLKATNNQISSLPED-MVNCSKLSKLDVEGNKLTALS 176

Query: 297 ----------------------LSYNIASL-------PENPPFSSLP-------HLQELY 320
                                 L  NI SL       P     SS+P        L E Y
Sbjct: 177 ENHIASWTMLAEPNACKDMLGVLPQNIGSLSRLIRPDPHQNKISSVPPSIGGCSSLVEFY 236

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L    L   P +I  L +L  LDL  N L+  P G   L  L+ LDLS+N+++ L PELG
Sbjct: 237 LGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKL-KLSYLDLSNNSLTGLHPELG 295

Query: 381 LLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
            +  +L+ L L GNPLR++R ++++  T A+LKYL+ ++
Sbjct: 296 NMT-TLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRL 333


>gi|7021726|gb|AAF35407.1| unknown protein [Arabidopsis thaliana]
          Length = 562

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 284/401 (70%), Positives = 333/401 (83%), Gaps = 1/401 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +SKLDVEGNKLT LS N IASWTML EL A KN+L  +P+ IGSLSRLIRLDLHQN+I S
Sbjct: 162 LSKLDVEGNKLTALSENHIASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISS 221

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P SI GC SL EFY+G N+LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LD
Sbjct: 222 VPPSIGGCSSLVEFYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLD 281

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           LSNNSL+GL PE+G MTTLRKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ A
Sbjct: 282 LSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSA 341

Query: 181 ST-TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           ST TKE++I  A R+S++SKELSLEG+NLS +PSE+WE+GEITK++LS+NSI+ELP +LS
Sbjct: 342 STPTKENVIASAARMSISSKELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLS 401

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  SLQTLILSRNKIKDWP AIL SL +L CLKLDNNPL Q+P DGF+ +  LQILDLS 
Sbjct: 402 TSVSLQTLILSRNKIKDWPGAILKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSV 461

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           N  S  E+P F  LP L+ELYL R+QL E P DIL L  L ILDL+QNSLQSIP+G KN+
Sbjct: 462 NAVSFREHPKFCHLPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNM 521

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIR 400
           TSL  LD+S+NNIS+LPPELGLLEP+L+ LRLDGNPLR  +
Sbjct: 522 TSLKHLDISNNNISSLPPELGLLEPTLEVLRLDGNPLRRYK 562



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 153/336 (45%), Gaps = 51/336 (15%)

Query: 119 LDLSNNSLSGLPPEI-------------GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
           L+LSN SL  +P E+              +   L+KL+L  N +  LR  L N     +L
Sbjct: 14  LNLSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVLREDLKNLACLVVL 73

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
               ++L     S+      +L  M        K L +   ++S +P +I  A  + KLD
Sbjct: 74  NVSHNKL-----SQLPAAIGELTAM--------KSLDVSFNSISELPEQIGSAISLVKLD 120

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
            S N ++ELP  +  C  L  L  + N+I   P+ ++   S LS L ++ N L  +  + 
Sbjct: 121 CSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNC-SKLSKLDVEGNKLTALSENH 179

Query: 286 FKDIPMLQILDLSYNI-ASLPEN---------------------PPFSSLPHLQELYLRR 323
                ML  L+   N+   LP+N                     P       L E YL  
Sbjct: 180 IASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGI 239

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L   P +I  L +L  LDL  N L+  P G   L  L+ LDLS+N+++ L PELG + 
Sbjct: 240 NSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKL-KLSYLDLSNNSLTGLHPELGNMT 298

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
            +L+ L L GNPLR++R ++++  T A+LKYL+ ++
Sbjct: 299 -TLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRL 333



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 185/412 (44%), Gaps = 57/412 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L+V  NKL+ L    I   T +  L  S N ++ +PE IGS   L++LD   NR+  +P 
Sbjct: 73  LNVSHNKLSQLPA-AIGELTAMKSLDVSFNSISELPEQIGSAISLVKLDCSSNRLKELPD 131

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDL 121
           SI  C  L++    NN +S+LP ++   SKL  LD+  N+L        A    L+ L+ 
Sbjct: 132 SIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSENHIASWTMLAELNA 191

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
             N L  LP  IG ++ L +L L  N + ++  S+  G   +L+++              
Sbjct: 192 CKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSI--GGCSSLVEFY------------- 236

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
                       L + S         LS +P+EI +   +  LDL  N ++E P  + +C
Sbjct: 237 ------------LGINS---------LSTLPAEIGDLSRLGTLDLRSNQLKEYP--VGAC 273

Query: 242 A-SLQTLILSRNKIKD-WPDAILTSLSSLSCLKLDNNPLRQV-------PSDGFKDIPML 292
              L  L LS N +    P+  L ++++L  L L  NPLR +       P+         
Sbjct: 274 KLKLSYLDLSNNSLTGLHPE--LGNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRS 331

Query: 293 QILDLSYNIASLP--ENPPFSSLP---HLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           ++ +     AS P  EN   S+       +EL L  + L + P+++    ++  ++LS+N
Sbjct: 332 RLSNSEETSASTPTKENVIASAARMSISSKELSLEGLNLSDVPSEVWESGEITKVNLSKN 391

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           S++ +P       SL  L LS N I   P  +    P+L  L+LD NPL  I
Sbjct: 392 SIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPNLMCLKLDNNPLNQI 443


>gi|357137806|ref|XP_003570490.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Brachypodium distachyon]
          Length = 586

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 275/425 (64%), Positives = 345/425 (81%), Gaps = 3/425 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +SKLD+EGNKL +LS N+ +SWT+LTEL A+KN+L  +P +IG+LS+LIRLDLHQN+I  
Sbjct: 162 LSKLDLEGNKLEMLSENMFSSWTILTELNAAKNILTTIPASIGALSKLIRLDLHQNKITL 221

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IPSSI GC SLAEFYMGNN L ++PA++G LSKLGTLDLHSNQLKEY V AC+L+LS LD
Sbjct: 222 IPSSIKGCSSLAEFYMGNNLLLSIPADIGMLSKLGTLDLHSNQLKEYPVGACKLKLSFLD 281

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           LSNN+LSGLPPE+G MTTLRKLLL+GNP+RTLRSSLV+GPT  LLKYLRSRL  +E++  
Sbjct: 282 LSNNTLSGLPPELGTMTTLRKLLLSGNPMRTLRSSLVSGPTSTLLKYLRSRLSSDEEASG 341

Query: 181 ST---TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
           S    TK+D +  A RLS++SKEL+L G+ ++++P   WE  ++ KLDLS+NSI++LP E
Sbjct: 342 SGRTPTKDDQVAAARRLSLSSKELNLSGLGVTSVPPAAWETSDVVKLDLSKNSIEDLPNE 401

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           L+ C+SLQ L+LS NKIK WP  +++SL SLS LKLDNNPL ++ S   + +  L++LDL
Sbjct: 402 LTLCSSLQALVLSNNKIKKWPGMVVSSLPSLSSLKLDNNPLAEISSTDLEVLSKLEVLDL 461

Query: 298 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
           S N +SL +    SSLP LQELYLRR++L E P  +L L+ LRILDLSQN L +IPEG K
Sbjct: 462 SGNASSLTKPSALSSLPQLQELYLRRVKLHEFPIGLLGLKLLRILDLSQNYLTTIPEGIK 521

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
             T+L EL+LSDNNI+ALP ELGLLEP+LQ L+LDGNPLRSIRRT+LDRGTKAVL+YLKD
Sbjct: 522 EFTALIELNLSDNNITALPAELGLLEPNLQVLKLDGNPLRSIRRTVLDRGTKAVLQYLKD 581

Query: 418 KIPEN 422
           K+P +
Sbjct: 582 KLPSH 586



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 182/392 (46%), Gaps = 32/392 (8%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I    +L  L  S N +N +PE IG  + L+++D   N +  +P+S++GC +L+E    N
Sbjct: 87  IGDLPLLKSLDISFNQINTVPEEIGLAAALVKVDFSNNCLTELPASLAGCLNLSELKASN 146

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLK---EYCVEACQLRLSVLDLSNNSLSGLPPEIGK 135
           N +S +P EL   SKL  LDL  N+L+   E    +  + L+ L+ + N L+ +P  IG 
Sbjct: 147 NKISRIPDELAGCSKLSKLDLEGNKLEMLSENMFSSWTI-LTELNAAKNILTTIPASIGA 205

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           ++ L +L L  N + TL  S + G +     Y+ + L              L+++   + 
Sbjct: 206 LSKLIRLDLHQNKI-TLIPSSIKGCSSLAEFYMGNNL--------------LLSIPADIG 250

Query: 196 VTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           + SK   L L    L   P    +  +++ LDLS N++  LPPEL +  +L+ L+LS N 
Sbjct: 251 MLSKLGTLDLHSNQLKEYPVGACKL-KLSFLDLSNNTLSGLPPELGTMTTLRKLLLSGNP 309

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 313
           ++    ++++  +S     L +       + G    P       +    SL         
Sbjct: 310 MRTLRSSLVSGPTSTLLKYLRSRLSSDEEASGSGRTPTKDDQVAAARRLSLSS------- 362

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
              +EL L  + +   P        +  LDLS+NS++ +P      +SL  L LS+N I 
Sbjct: 363 ---KELNLSGLGVTSVPPAAWETSDVVKLDLSKNSIEDLPNELTLCSSLQALVLSNNKIK 419

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
             P  +    PSL +L+LD NPL  I  T L+
Sbjct: 420 KWPGMVVSSLPSLSSLKLDNNPLAEISSTDLE 451



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 118/288 (40%), Gaps = 69/288 (23%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L L   NL  +  ++     +  L++S N I  LP  +     L++L +S N+I   P
Sbjct: 48  QKLILAHNNLEVLREDLRNLSSLVVLNISHNQIYSLPAAIGDLPLLKSLDISFNQINTVP 107

Query: 259 DAI---------------LTSLSS-------LSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           + I               LT L +       LS LK  NN + ++P D       L  LD
Sbjct: 108 EEIGLAAALVKVDFSNNCLTELPASLAGCLNLSELKASNNKISRIP-DELAGCSKLSKLD 166

Query: 297 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
           L  N   +     FSS   L EL   +  L   P  I  L +L  LDL QN +  IP   
Sbjct: 167 LEGNKLEMLSENMFSSWTILTELNAAKNILTTIPASIGALSKLIRLDLHQNKITLIPSSI 226

Query: 357 KNLTSLTE---------------------------------------------LDLSDNN 371
           K  +SL E                                             LDLS+N 
Sbjct: 227 KGCSSLAEFYMGNNLLLSIPADIGMLSKLGTLDLHSNQLKEYPVGACKLKLSFLDLSNNT 286

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           +S LPPELG +  +L+ L L GNP+R++R +++   T  +LKYL+ ++
Sbjct: 287 LSGLPPELGTMT-TLRKLLLSGNPMRTLRSSLVSGPTSTLLKYLRSRL 333



 Score = 44.7 bits (104), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 12/121 (9%)

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 320
           IL S      L L N  LR+VP + +             N+ +  ++  +     LQ+L 
Sbjct: 4   ILKSARESGSLNLSNRSLREVPGEVYN------------NLDTGSQDDKWWEGVDLQKLI 51

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L    L     D+  L  L +L++S N + S+P    +L  L  LD+S N I+ +P E+G
Sbjct: 52  LAHNNLEVLREDLRNLSSLVVLNISHNQIYSLPAAIGDLPLLKSLDISFNQINTVPEEIG 111

Query: 381 L 381
           L
Sbjct: 112 L 112


>gi|242067058|ref|XP_002454818.1| hypothetical protein SORBIDRAFT_04g038010 [Sorghum bicolor]
 gi|241934649|gb|EES07794.1| hypothetical protein SORBIDRAFT_04g038010 [Sorghum bicolor]
          Length = 586

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 278/423 (65%), Positives = 342/423 (80%), Gaps = 3/423 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +SKLD+EGNKL +LS N+  SWTMLTEL  +KNLL  +P +IG+L +LIRLD+HQN+I S
Sbjct: 162 LSKLDLEGNKLVMLSENMFVSWTMLTELNLAKNLLTAIPSSIGALPKLIRLDMHQNKITS 221

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IP SI GC SLAEFYMGNN LS++PA++G LSKLG LDLHSNQLKEY V AC L+LS LD
Sbjct: 222 IPPSIKGCSSLAEFYMGNNLLSSIPADIGMLSKLGILDLHSNQLKEYPVGACNLKLSFLD 281

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           LSNNSLSGLP E+GKMTTLRKLLLTGNP+RTLRSSLV+GPT  LLKYLRSRL  +E++  
Sbjct: 282 LSNNSLSGLPAELGKMTTLRKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDEEASG 341

Query: 181 ST---TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
           S    TK+D I  A RLS++SKEL L G+ ++++P+  WE  ++ KLDLS+NSI++LP E
Sbjct: 342 SGSTPTKDDQIAAARRLSLSSKELDLSGLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNE 401

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           LS C+SLQ+L+LS NKIK WP  +++SL SLS LKLDNNPL ++ S     +  L++LDL
Sbjct: 402 LSLCSSLQSLVLSNNKIKKWPRTVVSSLPSLSSLKLDNNPLVEISSTDLVPLSKLEVLDL 461

Query: 298 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
           S N ++LPE    S+LP L ELYLRRM+L E P  +L L+QLRILDLSQNSL ++PEG K
Sbjct: 462 SGNASALPEPSAVSALPQLHELYLRRMKLHEFPNGLLGLKQLRILDLSQNSLTTVPEGIK 521

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           N T+L ELDLSDNNI+ALP ELGLLE +LQ L+LDGNPLRSIRRT+L+RGTKA+LKYLK+
Sbjct: 522 NFTALIELDLSDNNITALPAELGLLEANLQVLKLDGNPLRSIRRTLLERGTKAILKYLKE 581

Query: 418 KIP 420
           K+P
Sbjct: 582 KLP 584



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 122/292 (41%), Gaps = 71/292 (24%)

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ----------------------- 232
           V  ++L L   NL  +  ++     +  L++S N+I                        
Sbjct: 45  VDLQKLILAHNNLEVLREDLRNLSSLVVLNISHNNISSLPAAIGDLPLLKSLDISFNQIN 104

Query: 233 -----------------------ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
                                  ELPP L+ C  L  L  S N I   PD +L   S LS
Sbjct: 105 TLPEEIGLATALVKVDFSNNFLTELPPSLAKCPDLSELKASNNNISRIPD-VLAGCSKLS 163

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--------IASLPE--------------N 307
            L L+ N L  +  + F    ML  L+L+ N        I +LP+               
Sbjct: 164 KLDLEGNKLVMLSENMFVSWTMLTELNLAKNLLTAIPSSIGALPKLIRLDMHQNKITSIP 223

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
           P       L E Y+    L   P DI  L +L ILDL  N L+  P G  NL  L+ LDL
Sbjct: 224 PSIKGCSSLAEFYMGNNLLSSIPADIGMLSKLGILDLHSNQLKEYPVGACNL-KLSFLDL 282

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           S+N++S LP ELG +  +L+ L L GNP+R++R +++   T  +LKYL+ ++
Sbjct: 283 SNNSLSGLPAELGKMT-TLRKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRL 333



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 156/366 (42%), Gaps = 57/366 (15%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I    +L  L  S N +N +PE IG  + L+++D   N +  +P S++ C  L+E    N
Sbjct: 87  IGDLPLLKSLDISFNQINTLPEEIGLATALVKVDFSNNFLTELPPSLAKCPDLSELKASN 146

Query: 79  NALSALPAELGKLSKLGTLDLHSNQ---LKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK 135
           N +S +P  L   SKL  LDL  N+   L E    +  + L+ L+L+ N L+ +P  IG 
Sbjct: 147 NNISRIPDVLAGCSKLSKLDLEGNKLVMLSENMFVSWTM-LTELNLAKNLLTAIPSSIGA 205

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           +  L +L +  N + ++  S + G +     Y+ + L                       
Sbjct: 206 LPKLIRLDMHQNKITSIPPS-IKGCSSLAEFYMGNNL----------------------- 241

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA-SLQTLILSRNKI 254
                       LS+IP++I    ++  LDL  N ++E P  + +C   L  L LS N +
Sbjct: 242 ------------LSSIPADIGMLSKLGILDLHSNQLKEYP--VGACNLKLSFLDLSNNSL 287

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 314
              P A L  +++L  L L  NP+R + S          +  L   ++S  E     S P
Sbjct: 288 SGLP-AELGKMTTLRKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDEEASGSGSTP 346

Query: 315 HL--QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
               Q    RR+ L             + LDLS   + S+P      + + +LDLS N+I
Sbjct: 347 TKDDQIAAARRLSLSS-----------KELDLSGLGVTSVPAAAWETSDVVKLDLSKNSI 395

Query: 373 SALPPE 378
             LP E
Sbjct: 396 EDLPNE 401



 Score = 45.1 bits (105), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 12/121 (9%)

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 320
           IL S      L L N  LR++P + +             N+ +  ++  +     LQ+L 
Sbjct: 4   ILKSARESGSLNLSNRSLREIPKEVYN------------NLDTGSQDEKWWEGVDLQKLI 51

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L    L     D+  L  L +L++S N++ S+P    +L  L  LD+S N I+ LP E+G
Sbjct: 52  LAHNNLEVLREDLRNLSSLVVLNISHNNISSLPAAIGDLPLLKSLDISFNQINTLPEEIG 111

Query: 381 L 381
           L
Sbjct: 112 L 112


>gi|293333389|ref|NP_001169465.1| uncharacterized protein LOC100383336 [Zea mays]
 gi|224029533|gb|ACN33842.1| unknown [Zea mays]
          Length = 584

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 277/421 (65%), Positives = 338/421 (80%), Gaps = 1/421 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +SKLD+EGNKL  LS N+  SWTMLTEL  +KNLL  +P +IG+L +LIRLD+HQN+I S
Sbjct: 162 LSKLDLEGNKLVALSENMFVSWTMLTELNLAKNLLTAIPGSIGALPKLIRLDMHQNKITS 221

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IP SI GC SLAE YMGNN LS++PA++G LSKLG LDLHSNQLKEY V AC L+LS LD
Sbjct: 222 IPPSIKGCSSLAELYMGNNLLSSIPADIGTLSKLGILDLHSNQLKEYPVGACNLKLSFLD 281

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           LSNNSLSGLP E+GKMTTLRKLLLTGNP+RTLRSSLV+GPT  LLKYLRSRL  +E+   
Sbjct: 282 LSNNSLSGLPAELGKMTTLRKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDEEGSR 341

Query: 181 ST-TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           ST TK+D I  A RLS++SKEL L G+ ++++P+  WE  ++ KLDLS+NSI++LP ELS
Sbjct: 342 STPTKDDQIAAARRLSLSSKELDLSGLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNELS 401

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C+SLQ+L+LS NKIK WP  +++SL  LS LKLDNNPL ++ S     +  L++LDLS 
Sbjct: 402 LCSSLQSLVLSNNKIKRWPHTVVSSLPCLSSLKLDNNPLVEISSTDLVPLSKLEVLDLSG 461

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           N ++LPE    S+LP LQELYLRRM+L E P  +L L+ LRILDLSQN L ++PEG KN 
Sbjct: 462 NASALPEPSAVSALPQLQELYLRRMKLHEFPNGLLGLKLLRILDLSQNHLTTVPEGIKNF 521

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           T+L ELDLSDNNI+ALP ELGLLE +LQ L+LDGNPLRSIRRT+L+RGTKAVLKYLK+K+
Sbjct: 522 TALIELDLSDNNITALPAELGLLEANLQVLKLDGNPLRSIRRTLLERGTKAVLKYLKEKL 581

Query: 420 P 420
           P
Sbjct: 582 P 582



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 123/292 (42%), Gaps = 71/292 (24%)

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ----------------------- 232
           V  ++L L   NL  +  ++     +  L++S N I                        
Sbjct: 45  VDLQKLILAHNNLEVLREDLRNLSSLVVLNISHNKISSLPAAIGDLPLLKSLDMSFNQIN 104

Query: 233 -----------------------ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
                                  ELPP L++C  L  L  S N I   PD +L   S LS
Sbjct: 105 TLPEEIGLATALVKVDFSNNCLTELPPNLATCPDLSELKASNNNISRVPD-VLAGCSKLS 163

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--------IASLPE--------------N 307
            L L+ N L  +  + F    ML  L+L+ N        I +LP+               
Sbjct: 164 KLDLEGNKLVALSENMFVSWTMLTELNLAKNLLTAIPGSIGALPKLIRLDMHQNKITSIP 223

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
           P       L ELY+    L   P DI  L +L ILDL  N L+  P G  NL  L+ LDL
Sbjct: 224 PSIKGCSSLAELYMGNNLLSSIPADIGTLSKLGILDLHSNQLKEYPVGACNL-KLSFLDL 282

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           S+N++S LP ELG +  +L+ L L GNP+R++R +++   T  +LKYL+ ++
Sbjct: 283 SNNSLSGLPAELGKMT-TLRKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRL 333



 Score = 44.7 bits (104), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 12/121 (9%)

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 320
           IL S      L L N  LR++P + +             N+ +  ++  +     LQ+L 
Sbjct: 4   ILKSARESGSLNLSNRSLREIPKEVYN------------NLDTGSQDEKWWEGVDLQKLI 51

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L    L     D+  L  L +L++S N + S+P    +L  L  LD+S N I+ LP E+G
Sbjct: 52  LAHNNLEVLREDLRNLSSLVVLNISHNKISSLPAAIGDLPLLKSLDMSFNQINTLPEEIG 111

Query: 381 L 381
           L
Sbjct: 112 L 112


>gi|195640496|gb|ACG39716.1| leucine-rich repeat-containing protein 40 [Zea mays]
          Length = 586

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 275/423 (65%), Positives = 337/423 (79%), Gaps = 3/423 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +SKLD+EGNKL  LS N+  SWTMLTEL  +KNLL  +P +IG+L +LIRLD+HQN+I S
Sbjct: 162 LSKLDLEGNKLVALSENMFVSWTMLTELNLAKNLLTAIPGSIGALPKLIRLDIHQNKITS 221

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IP SI GC SLAE YMGNN LS++PA++G LSKLG LDLHSNQLKEY V AC L+LS LD
Sbjct: 222 IPPSIKGCSSLAELYMGNNLLSSIPADIGTLSKLGILDLHSNQLKEYPVGACNLKLSFLD 281

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           LSNNSLSGLP E+GKMTTLRKLLLTGNP+RTLRSSLV+GPT  LLKYLRSRL  +E++  
Sbjct: 282 LSNNSLSGLPAELGKMTTLRKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDEEASG 341

Query: 181 ST---TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
           S    TK+D I  A RLS++SKEL L  + ++++P+  WE  ++ KLDLS+NSI++LP E
Sbjct: 342 SRSTPTKDDQIAAARRLSLSSKELDLSVLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNE 401

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           LS C+SLQ+L+LS NKIK WP  +++SL  LS LKLDNNPL ++ S     +  L++LDL
Sbjct: 402 LSLCSSLQSLVLSNNKIKRWPHTVVSSLPCLSSLKLDNNPLVEISSTDLVPLSKLEVLDL 461

Query: 298 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
           S N ++LPE    S+LP LQELYLRRM+L E P  +L L+ LRILDLSQN L ++PEG K
Sbjct: 462 SGNASALPEPSAVSALPQLQELYLRRMKLHEFPNGLLGLKLLRILDLSQNHLTTVPEGIK 521

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           N T+L ELDLSDNNI+ALP ELGLLE +LQ L+LDGNPLRSIRRT+L+RGTKAVLKYLK+
Sbjct: 522 NFTALIELDLSDNNITALPAELGLLEANLQVLKLDGNPLRSIRRTLLERGTKAVLKYLKE 581

Query: 418 KIP 420
           K+P
Sbjct: 582 KLP 584



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 122/289 (42%), Gaps = 71/289 (24%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-------------------------- 232
           ++L L   NL  +  ++     +  L++S N I                           
Sbjct: 48  QKLILAHNNLEVLREDLRNLSSLVVLNISHNKISSLPAAIGDLPLLKSLDMSFNQINTLP 107

Query: 233 --------------------ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
                               ELPP L++C  L  L  S N I   PD +L   S LS L 
Sbjct: 108 EEIGLATALVKVDFSNNCLTELPPNLATCPDLSELKASNNNISRVPD-VLAGCSKLSKLD 166

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYN--------IASLPE--------------NPPF 310
           L+ N L  +  + F    ML  L+L+ N        I +LP+               P  
Sbjct: 167 LEGNKLVALSENMFVSWTMLTELNLAKNLLTAIPGSIGALPKLIRLDIHQNKITSIPPSI 226

Query: 311 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
                L ELY+    L   P DI  L +L ILDL  N L+  P G  NL  L+ LDLS+N
Sbjct: 227 KGCSSLAELYMGNNLLSSIPADIGTLSKLGILDLHSNQLKEYPVGACNL-KLSFLDLSNN 285

Query: 371 NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           ++S LP ELG +  +L+ L L GNP+R++R +++   T  +LKYL+ ++
Sbjct: 286 SLSGLPAELGKMT-TLRKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRL 333



 Score = 44.7 bits (104), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 12/121 (9%)

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 320
           IL S      L L N  LR++P + +             N+ +  ++  +     LQ+L 
Sbjct: 4   ILKSARESGSLNLSNRSLREIPKEVYN------------NLDTGSQDEKWWEGVDLQKLI 51

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L    L     D+  L  L +L++S N + S+P    +L  L  LD+S N I+ LP E+G
Sbjct: 52  LAHNNLEVLREDLRNLSSLVVLNISHNKISSLPAAIGDLPLLKSLDMSFNQINTLPEEIG 111

Query: 381 L 381
           L
Sbjct: 112 L 112


>gi|115449939|ref|NP_001048588.1| Os02g0826600 [Oryza sativa Japonica Group]
 gi|48716443|dbj|BAD23050.1| putative disease resistance protein Hcr2-5D [Oryza sativa Japonica
           Group]
 gi|113538119|dbj|BAF10502.1| Os02g0826600 [Oryza sativa Japonica Group]
          Length = 586

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 272/421 (64%), Positives = 337/421 (80%), Gaps = 3/421 (0%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +L++EGNKL  LS+ +  SWTMLTE+ A+KNLL  +P+ IG+LS+LIRLDLHQN+I  IP
Sbjct: 164 RLNLEGNKLVTLSDKMFMSWTMLTEMNAAKNLLTAIPDGIGALSKLIRLDLHQNKITLIP 223

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 122
            SI  C SLAEFYMGNN L+++P ++G LS LG LDLHSNQLKEY V AC+L+LS LDLS
Sbjct: 224 PSIKDCSSLAEFYMGNNLLTSIPEDIGMLSNLGILDLHSNQLKEYPVGACRLKLSFLDLS 283

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NNSLSGLP E+G MTTLRKLLLTGNP+RTLRSSLV+GPT ALLKYLRSRL  +E +  S 
Sbjct: 284 NNSLSGLPAELGTMTTLRKLLLTGNPMRTLRSSLVSGPTTALLKYLRSRLSSDEGASGSG 343

Query: 183 ---TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
              TK+D I  A RLS++SKEL L G+ ++++P   WE  ++ KLDLS+NSI++LP ELS
Sbjct: 344 STPTKDDQIAAARRLSLSSKELDLSGLGVTSVPPAAWETNDVMKLDLSKNSIEDLPNELS 403

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C+SLQ+LILS NKIK WP  + +SL+SLS LKLDNNPL ++ +   + +  L++LDLS 
Sbjct: 404 LCSSLQSLILSNNKIKRWPGTVFSSLASLSLLKLDNNPLAEILATDLEALSKLEVLDLSG 463

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           + +SLPE    S LPHL+ELYLRRM+L   P  +L L+ LRILDLSQN L S+PEG K+L
Sbjct: 464 SASSLPEPSAVSKLPHLKELYLRRMKLHGFPDSLLGLKLLRILDLSQNYLTSVPEGIKDL 523

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           TSL ELDLSDNNI+ LPPELGLLEP+LQ L+LDGNPLRSIRRT+L+RGTKA+LKYLK+K+
Sbjct: 524 TSLIELDLSDNNITTLPPELGLLEPNLQVLKLDGNPLRSIRRTLLERGTKAILKYLKEKL 583

Query: 420 P 420
           P
Sbjct: 584 P 584



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 165/419 (39%), Gaps = 132/419 (31%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N L VL  +L  + + L  L  S N ++ +P  IG L  L  LD+  N+I +
Sbjct: 47  LQKLILAHNNLEVLREDL-RNLSSLVVLNISHNNISSLPAAIGDLPLLKSLDVSSNQINA 105

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
            P  I    +L +    NN L+ LP  L +                 C+E     LS L+
Sbjct: 106 FPEEIGFATALVKVDCSNNCLTDLPVSLAR-----------------CLE-----LSELN 143

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
            SNN++S LP E+   + L +L L GN L TL   +        + +             
Sbjct: 144 ASNNTISVLPDELAGCSKLFRLNLEGNKLVTLSDKM-------FMSW------------- 183

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                   TM T ++  +K L      L+AIP  I    ++ +LDL +N I  +PP +  
Sbjct: 184 --------TMLTEMNA-AKNL------LTAIPDGIGALSKLIRLDLHQNKITLIPPSIKD 228

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
           C+SL    +  N +   P+ I   LS+L  L L +N L++ P    +       L LS+ 
Sbjct: 229 CSSLAEFYMGNNLLTSIPEDI-GMLSNLGILDLHSNQLKEYPVGACR-------LKLSF- 279

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
                                                    LDLS NSL  +P     +T
Sbjct: 280 -----------------------------------------LDLSNNSLSGLPAELGTMT 298

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
                                   +L+ L L GNP+R++R +++   T A+LKYL+ ++
Sbjct: 299 ------------------------TLRKLLLTGNPMRTLRSSLVSGPTTALLKYLRSRL 333



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 12/121 (9%)

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 320
           +L S      L L N  LR+VP + +             N+ +  ++  +     LQ+L 
Sbjct: 4   VLKSARESGSLNLSNRSLREVPKEVYN------------NLDTGAQDEKWWEGVDLQKLI 51

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L    L     D+  L  L +L++S N++ S+P    +L  L  LD+S N I+A P E+G
Sbjct: 52  LAHNNLEVLREDLRNLSSLVVLNISHNNISSLPAAIGDLPLLKSLDVSSNQINAFPEEIG 111

Query: 381 L 381
            
Sbjct: 112 F 112


>gi|218191855|gb|EEC74282.1| hypothetical protein OsI_09529 [Oryza sativa Indica Group]
          Length = 1017

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/400 (63%), Positives = 315/400 (78%), Gaps = 3/400 (0%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +L++EGNKL  LS+ +  SWTMLTE+ A+KNLL  +P+ IG+LS+LIRLDLHQN+I  IP
Sbjct: 164 RLNLEGNKLVTLSDKMFMSWTMLTEMNAAKNLLTAIPDGIGALSKLIRLDLHQNKITLIP 223

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 122
            SI  C SLAEFYMGNN L+++P ++G LS LG LDLHSNQLKEY V AC+L+LS LDLS
Sbjct: 224 PSIKDCSSLAEFYMGNNLLTSIPEDIGMLSNLGILDLHSNQLKEYPVGACRLKLSFLDLS 283

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NNSLSGLP E+G MTTLRKLLLTGNP+RTLRSSLV+GPT ALLKYLRSRL  +E +  S 
Sbjct: 284 NNSLSGLPAELGTMTTLRKLLLTGNPMRTLRSSLVSGPTTALLKYLRSRLSSDEGASGSG 343

Query: 183 ---TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
              TK+D I  A RLS++SKEL L G+ ++++P   WE  ++ KLDLS+NSI++LP ELS
Sbjct: 344 STPTKDDQIAAARRLSLSSKELDLSGLGVTSVPPAAWETNDVMKLDLSKNSIEDLPNELS 403

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C+SLQ+LILS NKIK WP  + +SL+SLS LKLDNNPL ++ +   + +  L++LDLS 
Sbjct: 404 LCSSLQSLILSNNKIKRWPGTVFSSLASLSLLKLDNNPLAEILATDLEALSKLEVLDLSG 463

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           + +SLPE    S LPHL+ELYLRRM+L   P  +L L+ LRILDLSQN L S+PEG K+L
Sbjct: 464 SASSLPEPSAVSKLPHLKELYLRRMKLHGFPDSLLGLKLLRILDLSQNYLTSVPEGIKDL 523

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           TSL ELDLSDNNI+ LPPELGLLEP+LQ L+LDGNPLR +
Sbjct: 524 TSLIELDLSDNNITTLPPELGLLEPNLQVLKLDGNPLRRV 563



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 146/305 (47%), Gaps = 42/305 (13%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L VL++S+N++S LP  IG +  L+ L ++ N +  L                    PE 
Sbjct: 70  LVVLNISHNNISSLPAAIGDLPLLKSLDVSSNQINAL--------------------PEE 109

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                       I  AT L     ++      L+ +P  +    E+++L+ S N+I  LP
Sbjct: 110 ------------IGFATALV----KVDCSNNCLTDLPVSLARCLELSELNASNNTISVLP 153

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            EL+ C+ L  L L  NK+    D +  S + L+ +    N L  +P DG   +  L  L
Sbjct: 154 DELAGCSKLFRLNLEGNKLVTLSDKMFMSWTMLTEMNAAKNLLTAIP-DGIGALSKLIRL 212

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           DL  N I  +P  P       L E Y+    L   P DI  L  L ILDL  N L+  P 
Sbjct: 213 DLHQNKITLIP--PSIKDCSSLAEFYMGNNLLTSIPEDIGMLSNLGILDLHSNQLKEYPV 270

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
           G   L  L+ LDLS+N++S LP ELG +  +L+ L L GNP+R++R +++   T A+LKY
Sbjct: 271 GACRL-KLSFLDLSNNSLSGLPAELGTMT-TLRKLLLTGNPMRTLRSSLVSGPTTALLKY 328

Query: 415 LKDKI 419
           L+ ++
Sbjct: 329 LRSRL 333



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 116/239 (48%), Gaps = 16/239 (6%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I    +L  L  S N +N +PE IG  + L+++D   N +  +P S++ C  L+E    N
Sbjct: 87  IGDLPLLKSLDVSSNQINALPEEIGFATALVKVDCSNNCLTDLPVSLARCLELSELNASN 146

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKM 136
           N +S LP EL   SKL  L+L  N+L      +      L+ ++ + N L+ +P  IG +
Sbjct: 147 NTISVLPDELAGCSKLFRLNLEGNKLVTLSDKMFMSWTMLTEMNAAKNLLTAIPDGIGAL 206

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           + L +L L  N +  +  S+ +  + A   Y+ + L        ++  ED I M + L +
Sbjct: 207 SKLIRLDLHQNKITLIPPSIKDCSSLAEF-YMGNNL-------LTSIPED-IGMLSNLGI 257

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
               L L    L   P       +++ LDLS NS+  LP EL +  +L+ L+L+ N ++
Sbjct: 258 ----LDLHSNQLKEYPVGACRL-KLSFLDLSNNSLSGLPAELGTMTTLRKLLLTGNPMR 311



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 12/123 (9%)

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 318
           + +L S      L L N  LR+VP + +             N+ +  ++  +     LQ+
Sbjct: 2   ERVLKSARESGSLNLSNRSLREVPKEVYN------------NLDTGAQDEKWWEGVDLQK 49

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L L    L     D+  L  L +L++S N++ S+P    +L  L  LD+S N I+ALP E
Sbjct: 50  LILAHNNLEVLREDLRNLSSLVVLNISHNNISSLPAAIGDLPLLKSLDVSSNQINALPEE 109

Query: 379 LGL 381
           +G 
Sbjct: 110 IGF 112


>gi|222623959|gb|EEE58091.1| hypothetical protein OsJ_08960 [Oryza sativa Japonica Group]
          Length = 939

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/400 (63%), Positives = 315/400 (78%), Gaps = 3/400 (0%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +L++EGNKL  LS+ +  SWTMLTE+ A+KNLL  +P+ IG+LS+LIRLDLHQN+I  IP
Sbjct: 164 RLNLEGNKLVTLSDKMFMSWTMLTEMNAAKNLLTAIPDGIGALSKLIRLDLHQNKITLIP 223

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 122
            SI  C SLAEFYMGNN L+++P ++G LS LG LDLHSNQLKEY V AC+L+LS LDLS
Sbjct: 224 PSIKDCSSLAEFYMGNNLLTSIPEDIGMLSNLGILDLHSNQLKEYPVGACRLKLSFLDLS 283

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NNSLSGLP E+G MTTLRKLLLTGNP+RTLRSSLV+GPT ALLKYLRSRL  +E +  S 
Sbjct: 284 NNSLSGLPAELGTMTTLRKLLLTGNPMRTLRSSLVSGPTTALLKYLRSRLSSDEGASGSG 343

Query: 183 ---TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
              TK+D I  A RLS++SKEL L G+ ++++P   WE  ++ KLDLS+NSI++LP ELS
Sbjct: 344 STPTKDDQIAAARRLSLSSKELDLSGLGVTSVPPAAWETNDVMKLDLSKNSIEDLPNELS 403

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C+SLQ+LILS NKIK WP  + +SL+SLS LKLDNNPL ++ +   + +  L++LDLS 
Sbjct: 404 LCSSLQSLILSNNKIKRWPGTVFSSLASLSLLKLDNNPLAEILATDLEALSKLEVLDLSG 463

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           + +SLPE    S LPHL+ELYLRRM+L   P  +L L+ LRILDLSQN L S+PEG K+L
Sbjct: 464 SASSLPEPSAVSKLPHLKELYLRRMKLHGFPDSLLGLKLLRILDLSQNYLTSVPEGIKDL 523

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           TSL ELDLSDNNI+ LPPELGLLEP+LQ L+LDGNPLR +
Sbjct: 524 TSLIELDLSDNNITTLPPELGLLEPNLQVLKLDGNPLRRV 563



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 145/305 (47%), Gaps = 42/305 (13%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L VL++S+N++S LP  IG +  L+ L ++ N +                       PE 
Sbjct: 70  LVVLNISHNNISSLPAAIGDLPLLKSLDVSSNQINAF--------------------PEE 109

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                       I  AT L     ++      L+ +P  +    E+++L+ S N+I  LP
Sbjct: 110 ------------IGFATALV----KVDCSNNCLTDLPVSLARCLELSELNASNNTISVLP 153

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            EL+ C+ L  L L  NK+    D +  S + L+ +    N L  +P DG   +  L  L
Sbjct: 154 DELAGCSKLFRLNLEGNKLVTLSDKMFMSWTMLTEMNAAKNLLTAIP-DGIGALSKLIRL 212

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           DL  N I  +P  P       L E Y+    L   P DI  L  L ILDL  N L+  P 
Sbjct: 213 DLHQNKITLIP--PSIKDCSSLAEFYMGNNLLTSIPEDIGMLSNLGILDLHSNQLKEYPV 270

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
           G   L  L+ LDLS+N++S LP ELG +  +L+ L L GNP+R++R +++   T A+LKY
Sbjct: 271 GACRL-KLSFLDLSNNSLSGLPAELGTMT-TLRKLLLTGNPMRTLRSSLVSGPTTALLKY 328

Query: 415 LKDKI 419
           L+ ++
Sbjct: 329 LRSRL 333



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 115/239 (48%), Gaps = 16/239 (6%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I    +L  L  S N +N  PE IG  + L+++D   N +  +P S++ C  L+E    N
Sbjct: 87  IGDLPLLKSLDVSSNQINAFPEEIGFATALVKVDCSNNCLTDLPVSLARCLELSELNASN 146

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKM 136
           N +S LP EL   SKL  L+L  N+L      +      L+ ++ + N L+ +P  IG +
Sbjct: 147 NTISVLPDELAGCSKLFRLNLEGNKLVTLSDKMFMSWTMLTEMNAAKNLLTAIPDGIGAL 206

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           + L +L L  N +  +  S+ +  + A   Y+ + L        ++  ED I M + L +
Sbjct: 207 SKLIRLDLHQNKITLIPPSIKDCSSLAEF-YMGNNL-------LTSIPED-IGMLSNLGI 257

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
               L L    L   P       +++ LDLS NS+  LP EL +  +L+ L+L+ N ++
Sbjct: 258 ----LDLHSNQLKEYPVGACRL-KLSFLDLSNNSLSGLPAELGTMTTLRKLLLTGNPMR 311



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 12/121 (9%)

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 320
           +L S      L L N  LR+VP + +             N+ +  ++  +     LQ+L 
Sbjct: 4   VLKSARESGSLNLSNRSLREVPKEVYN------------NLDTGAQDEKWWEGVDLQKLI 51

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L    L     D+  L  L +L++S N++ S+P    +L  L  LD+S N I+A P E+G
Sbjct: 52  LAHNNLEVLREDLRNLSSLVVLNISHNNISSLPAAIGDLPLLKSLDVSSNQINAFPEEIG 111

Query: 381 L 381
            
Sbjct: 112 F 112


>gi|302822487|ref|XP_002992901.1| hypothetical protein SELMODRAFT_136157 [Selaginella moellendorffii]
 gi|300139246|gb|EFJ05990.1| hypothetical protein SELMODRAFT_136157 [Selaginella moellendorffii]
          Length = 584

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 222/420 (52%), Positives = 294/420 (70%), Gaps = 2/420 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L +EGNK+T   ++L  S   LTEL A KN +  +PE IG+L+RL+RLDLHQN+I SIPS
Sbjct: 165 LSIEGNKITGFPSSLFHSLGNLTELNAGKNAITELPEEIGNLTRLLRLDLHQNKIKSIPS 224

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
           S+  C  L E Y G+N LS+LP E+G L  L T DLH NQL E+ V AC +RLSVLDLSN
Sbjct: 225 SLVNCSMLVEAYFGDNLLSSLPNEIGNLQSLLTFDLHGNQLSEFPVSACSMRLSVLDLSN 284

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N+LSGLPPE+G M +LRKL+LTGNPLRTLR+SLV G TPALLKYLR R    + +     
Sbjct: 285 NNLSGLPPELGFMGSLRKLVLTGNPLRTLRTSLVTGSTPALLKYLRDRSTAEDGNIFGMN 344

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
            ++ +  A R +V+SK LSL   NL  +P  +WE+ ++ +LDL++N IQELPPE+S C S
Sbjct: 345 IQEQVVQAARAAVSSKALSLSDKNLDHVPPAVWESCDLVQLDLAKNCIQELPPEMSMCTS 404

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 303
           ++ LIL+ NKI++WP ++  SL +L  L L  NP+  +P   F  +  LQ+LDLS  +A 
Sbjct: 405 MEALILADNKIQEWPGSVFASLPNLKHLNLARNPIVALPPGAFSAVSNLQLLDLSGVVAQ 464

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG--FKNLTS 361
           LP  P  S +  LQEL L R Q+   P D+ R+  LRILDLSQN++  +P+     +  +
Sbjct: 465 LPPPPCLSLMTGLQELRLMRTQMAAIPWDLPRMSSLRILDLSQNNISVLPQASLLSSFIT 524

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
           L ELDL+DNN+S LPP+LG LEP+L+ L++DGNPLRSIRR IL+RGTK +L+YL  K+P+
Sbjct: 525 LEELDLTDNNLSTLPPQLGYLEPTLRKLKVDGNPLRSIRRGILERGTKELLQYLHGKLPQ 584



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 164/330 (49%), Gaps = 41/330 (12%)

Query: 119 LDLSNNSLSGLPPEIGK-------------MTTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
           LDLSN +L  +PP++ K             +  L +L+L  N ++ L   L N  +  +L
Sbjct: 14  LDLSNRNLREVPPQVYKLLECVGQDEKWWELVDLHRLVLAHNKIKLLSQELGNLVSVVVL 73

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSK---ELSLEGMNLSA------------ 210
               + L      E+      ++T    L V+     EL +E  NL++            
Sbjct: 74  NISYNEL------ESLPESIGMLTSLKTLDVSHNAILELPVEIGNLASLVKFLASNNQIK 127

Query: 211 -IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +PS I    ++ +L LS N +  LP +L+SC+ L +L +  NKI  +P ++  SL +L+
Sbjct: 128 ELPSTIGLCVDLAELKLSNNGLTFLPDQLASCSRLISLSIEGNKITGFPSSLFHSLGNLT 187

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
            L    N + ++P +   ++  L  LDL  N I S+P +    S+  L E Y     L  
Sbjct: 188 ELNAGKNAITELPEE-IGNLTRLLRLDLHQNKIKSIPSSLVNCSM--LVEAYFGDNLLSS 244

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
            P +I  LQ L   DL  N L   P    ++  L+ LDLS+NN+S LPPELG +  SL+ 
Sbjct: 245 LPNEIGNLQSLLTFDLHGNQLSEFPVSACSM-RLSVLDLSNNNLSGLPPELGFMG-SLRK 302

Query: 389 LRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           L L GNPLR++R +++   T A+LKYL+D+
Sbjct: 303 LVLTGNPLRTLRTSLVTGSTPALLKYLRDR 332



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 179/398 (44%), Gaps = 45/398 (11%)

Query: 22  WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W +  L  L+ + N +  + + +G+L  ++ L++  N + S+P SI    SL    + +N
Sbjct: 42  WELVDLHRLVLAHNKIKLLSQELGNLVSVVVLNISYNELESLPESIGMLTSLKTLDVSHN 101

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKE------YCVEACQLRLSVLDLSNNSLSGLPPEI 133
           A+  LP E+G L+ L      +NQ+KE       CV+  +L+     LSNN L+ LP ++
Sbjct: 102 AILELPVEIGNLASLVKFLASNNQIKELPSTIGLCVDLAELK-----LSNNGLTFLPDQL 156

Query: 134 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 193
              + L  L + GN +    SSL +         L +    N    A T   + I   TR
Sbjct: 157 ASCSRLISLSIEGNKITGFPSSLFHS--------LGNLTELNAGKNAITELPEEIGNLTR 208

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L      L L    + +IPS +     + +     N +  LP E+ +  SL T  L  N+
Sbjct: 209 L----LRLDLHQNKIKSIPSSLVNCSMLVEAYFGDNLLSSLPNEIGNLQSLLTFDLHGNQ 264

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKDIPMLQILDLSYN-IASLPENPPFS 311
           + ++P +  +    LS L L NN L  +P + GF  +  L+ L L+ N + +L  +    
Sbjct: 265 LSEFPVSACS--MRLSVLDLSNNNLSGLPPELGF--MGSLRKLVLTGNPLRTLRTSLVTG 320

Query: 312 SLPHLQELYLRR-----------MQLREAPTDILRLQ-QLRILDLSQNSLQSIPEGFKNL 359
           S P L + YLR            M ++E      R     + L LS  +L  +P      
Sbjct: 321 STPALLK-YLRDRSTAEDGNIFGMNIQEQVVQAARAAVSSKALSLSDKNLDHVPPAVWES 379

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
             L +LDL+ N I  LPPE+ +   S++AL L  N ++
Sbjct: 380 CDLVQLDLAKNCIQELPPEMSMCT-SMEALILADNKIQ 416


>gi|302796795|ref|XP_002980159.1| hypothetical protein SELMODRAFT_112095 [Selaginella moellendorffii]
 gi|300152386|gb|EFJ19029.1| hypothetical protein SELMODRAFT_112095 [Selaginella moellendorffii]
          Length = 584

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 222/420 (52%), Positives = 295/420 (70%), Gaps = 2/420 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L +EGNK+T   ++L  S   LTEL A KN +  +PE IG+L+RL+RLDLHQN+I SIPS
Sbjct: 165 LSIEGNKITGFPSSLFHSLGNLTELNAGKNAITELPEEIGNLTRLLRLDLHQNKIKSIPS 224

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
           S+  C  L E Y G+N LS+LP E+G L  L T DLH NQL E+ V AC +RLSVLDLSN
Sbjct: 225 SLVNCSMLVEAYFGDNLLSSLPNEIGNLQSLLTFDLHGNQLSEFPVSACSMRLSVLDLSN 284

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N+LSGLPPE+G M +LRKL+LTGNPLRTLR+SLV G TPALLKYLR R    + +     
Sbjct: 285 NNLSGLPPELGFMGSLRKLVLTGNPLRTLRTSLVTGSTPALLKYLRDRSTAEDGNIFGMN 344

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
            ++ +  A R++V+SK LSL   NL  +P  +WE+ ++ +LDL++N IQELPPE+S C S
Sbjct: 345 IQEQVVQAARVAVSSKALSLSDKNLDHVPPAVWESCDLVQLDLAKNCIQELPPEMSMCTS 404

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 303
           ++ LIL+ NKI++WP ++  SL +L  L L  NP+  +P   F  +  LQ+LDLS  +A 
Sbjct: 405 MEALILADNKIQEWPGSVFASLPNLKHLNLARNPIVALPPGAFSAVSNLQLLDLSGVVAQ 464

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG--FKNLTS 361
           L   P  S +  LQEL L R Q+   P D+ R+  LRILDLSQN++  +P+     +  +
Sbjct: 465 LLPPPCLSLMTGLQELRLMRTQMAAIPWDLPRMSSLRILDLSQNNISVLPQASLLSSFIT 524

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
           L ELDL+DNN+S LPP+LG LEP+L+ L++DGNPLRSIRR IL+RGTKA+L+YL  K+P+
Sbjct: 525 LEELDLTDNNLSTLPPQLGYLEPTLRKLKVDGNPLRSIRRGILERGTKALLQYLHGKLPQ 584



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 168/383 (43%), Gaps = 87/383 (22%)

Query: 37  GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 96
           G  E    L  L RL L  N+I  +   +    S+    +  N L +LP  +G L+ L T
Sbjct: 36  GQDEKWWELVDLHRLVLAHNKIKLLSQELGNLVSVVVLNISYNELESLPESIGMLTSLKT 95

Query: 97  LDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
                                 LD+S+N++  LP EIG + +L K L + N ++ L S++
Sbjct: 96  ----------------------LDVSHNAILELPVEIGNLASLVKFLASNNQIKELASTI 133

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                 A LK   + L    D  AS ++  LI+           LS+EG  ++  PS ++
Sbjct: 134 GLCVDLAELKLSNNGLTFLPDQLASCSR--LIS-----------LSIEGNKITGFPSSLF 180

Query: 217 EA-GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
            + G +T+L+  +N+I ELP E+ +   L  L L +NKIK  P ++      ++C     
Sbjct: 181 HSLGNLTELNAGKNAITELPEEIGNLTRLLRLDLHQNKIKSIPSSL------VNC----- 229

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
                                                   L E Y     L   P +I  
Sbjct: 230 --------------------------------------SMLVEAYFGDNLLSSLPNEIGN 251

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           LQ L   DL  N L   P    ++  L+ LDLS+NN+S LPPELG +  SL+ L L GNP
Sbjct: 252 LQSLLTFDLHGNQLSEFPVSACSM-RLSVLDLSNNNLSGLPPELGFMG-SLRKLVLTGNP 309

Query: 396 LRSIRRTILDRGTKAVLKYLKDK 418
           LR++R +++   T A+LKYL+D+
Sbjct: 310 LRTLRTSLVTGSTPALLKYLRDR 332



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 180/398 (45%), Gaps = 45/398 (11%)

Query: 22  WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W +  L  L+ + N +  + + +G+L  ++ L++  N + S+P SI    SL    + +N
Sbjct: 42  WELVDLHRLVLAHNKIKLLSQELGNLVSVVVLNISYNELESLPESIGMLTSLKTLDVSHN 101

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKE------YCVEACQLRLSVLDLSNNSLSGLPPEI 133
           A+  LP E+G L+ L      +NQ+KE       CV+  +L+     LSNN L+ LP ++
Sbjct: 102 AILELPVEIGNLASLVKFLASNNQIKELASTIGLCVDLAELK-----LSNNGLTFLPDQL 156

Query: 134 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 193
              + L  L + GN +    SSL +         L +    N    A T   + I   TR
Sbjct: 157 ASCSRLISLSIEGNKITGFPSSLFHS--------LGNLTELNAGKNAITELPEEIGNLTR 208

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L      L L    + +IPS +     + +     N +  LP E+ +  SL T  L  N+
Sbjct: 209 L----LRLDLHQNKIKSIPSSLVNCSMLVEAYFGDNLLSSLPNEIGNLQSLLTFDLHGNQ 264

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKDIPMLQILDLSYN-IASLPENPPFS 311
           + ++P +  +    LS L L NN L  +P + GF  +  L+ L L+ N + +L  +    
Sbjct: 265 LSEFPVSACS--MRLSVLDLSNNNLSGLPPELGF--MGSLRKLVLTGNPLRTLRTSLVTG 320

Query: 312 SLPHLQELYLRR-----------MQLREAPTDILRLQ-QLRILDLSQNSLQSIPEGFKNL 359
           S P L + YLR            M ++E      R+    + L LS  +L  +P      
Sbjct: 321 STPALLK-YLRDRSTAEDGNIFGMNIQEQVVQAARVAVSSKALSLSDKNLDHVPPAVWES 379

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
             L +LDL+ N I  LPPE+ +   S++AL L  N ++
Sbjct: 380 CDLVQLDLAKNCIQELPPEMSMCT-SMEALILADNKIQ 416



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 13/133 (9%)

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 330
           L L N  LR+VP   +K   +L+ +          ++  +  L  L  L L   +++   
Sbjct: 14  LDLSNRNLREVPPQVYK---LLECVG---------QDEKWWELVDLHRLVLAHNKIKLLS 61

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            ++  L  + +L++S N L+S+PE    LTSL  LD+S N I  LP E+G L  SL    
Sbjct: 62  QELGNLVSVVVLNISYNELESLPESIGMLTSLKTLDVSHNAILELPVEIGNLA-SLVKFL 120

Query: 391 LDGNPLRSIRRTI 403
              N ++ +  TI
Sbjct: 121 ASNNQIKELASTI 133


>gi|168059285|ref|XP_001781634.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666948|gb|EDQ53590.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 604

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/433 (52%), Positives = 301/433 (69%), Gaps = 13/433 (3%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S L++E N+L+ LS +L ++ + LTELIA +N L  +P ++G LS+LIRLDLHQNR+  
Sbjct: 168 LSTLNIESNRLSELSESLFSALSGLTELIAGRNSLTALPNSLGRLSKLIRLDLHQNRLTY 227

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P +I+GC +L E Y+G+N L  +P E+G L  L  LDLHSNQL E+  +AC LRLS+LD
Sbjct: 228 LPPTIAGCVALMELYLGDNLLKVVPDEIGSLKSLSNLDLHSNQLTEFSAKACLLRLSLLD 287

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE---- 176
           LSNN+LSGLP E+G MT+LRKLLL GNP+R+LRS+LV GPTPALLKYL+SR+P+ E    
Sbjct: 288 LSNNNLSGLPAELGAMTSLRKLLLVGNPMRSLRSTLVMGPTPALLKYLQSRIPQTEAEAE 347

Query: 177 ---------DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
                    +   +    D I  A+R +  SK LSL   NLS IP   WE  +IT LDLS
Sbjct: 348 ADEQAPATGNVFGTIGLSDQIVHASRQATASKVLSLPKKNLSEIPPAAWEGADITTLDLS 407

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            N I+ LP EL+ C++L+ L+LS NK  +WP A+L S+ +L  L L  NP R+ P   F 
Sbjct: 408 HNQIKVLPTELAMCSALEVLMLSNNKFSEWPGAVLGSIPNLHELLLAYNPFREFPQGAFV 467

Query: 288 DIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
            +  L +LDLS   A LP  P  + +P+LQEL L+R QL++   D+  LQ+LRILD+SQN
Sbjct: 468 AVAKLTVLDLSGVPARLPPPPALAEMPNLQELRLKRAQLQDFREDLKSLQKLRILDVSQN 527

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
            +  IPE    L  L  LD+SDNNIS LPP+LGLLEP+L+ L++DGNPLRSIRR IL++G
Sbjct: 528 FISVIPEWVTCLARLETLDISDNNISQLPPKLGLLEPTLKHLKVDGNPLRSIRRPILEKG 587

Query: 408 TKAVLKYLKDKIP 420
           TK +L+YL+D+IP
Sbjct: 588 TKTLLQYLQDRIP 600



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 148/307 (48%), Gaps = 42/307 (13%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+ L+LS+N LS LPP IG ++ L+ L ++GN +  L S L                   
Sbjct: 76  LTFLNLSHNQLSFLPPAIGNLSLLKILDISGNSVVELPSEL------------------- 116

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                       +T   RL+  S  LS    +L           E+  L    N +  LP
Sbjct: 117 ----------GFLTALVRLNCASNSLSKLSSSLG-------NCTELVDLKAHNNLLVTLP 159

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            EL +C+ L TL +  N++ +  +++ ++LS L+ L    N L  +P +    +  L  L
Sbjct: 160 EELGNCSKLSTLNIESNRLSELSESLFSALSGLTELIAGRNSLTALP-NSLGRLSKLIRL 218

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           DL  N +  LP  P  +    L ELYL    L+  P +I  L+ L  LDL  N L     
Sbjct: 219 DLHQNRLTYLP--PTIAGCVALMELYLGDNLLKVVPDEIGSLKSLSNLDLHSNQLTEF-S 275

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
               L  L+ LDLS+NN+S LP ELG +  SL+ L L GNP+RS+R T++   T A+LKY
Sbjct: 276 AKACLLRLSLLDLSNNNLSGLPAELGAMT-SLRKLLLVGNPMRSLRSTLVMGPTPALLKY 334

Query: 415 LKDKIPE 421
           L+ +IP+
Sbjct: 335 LQSRIPQ 341



 Score = 38.5 bits (88), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           ++  LD+S NS+ +I +   ++ SLT L+LS N +S LPP +G L   L+ L + GN
Sbjct: 52  EIHKLDISHNSIAAISDRLGDIGSLTFLNLSHNQLSFLPPAIGNLS-LLKILDISGN 107


>gi|413939568|gb|AFW74119.1| hypothetical protein ZEAMMB73_915670 [Zea mays]
          Length = 412

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 238/444 (53%), Positives = 292/444 (65%), Gaps = 75/444 (16%)

Query: 18  LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           +  SWTMLTEL    NL     E+  S  R                              
Sbjct: 1   MFVSWTMLTEL----NLARYSKESTYSHPR------------------------------ 26

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI---- 133
           NN LS++PA++G LSKLG LDLHSNQLKEY V AC L+LS LDLSNNSLSGLP E+    
Sbjct: 27  NNLLSSIPADIGTLSKLGILDLHSNQLKEYPVGACNLKLSFLDLSNNSLSGLPAELDHRS 86

Query: 134 ----------------------------------GKMTTLRKLLLTGNPLRTLRSSLVNG 159
                                             GKMTTLRKLLLTGNP+RTLRSSLV+G
Sbjct: 87  DSCMRDKCMLWPLRTSYSLWYCLTENSDNPCATQGKMTTLRKLLLTGNPMRTLRSSLVSG 146

Query: 160 PTPALLKYLRSRLPENEDSEAST---TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
           PT  LLKYLRSRL  +E++  S    TK+D I  A RLS++SKEL L G+ ++++P+  W
Sbjct: 147 PTTTLLKYLRSRLSSDEEASGSRSTPTKDDQIAAARRLSLSSKELDLSGLGVTSVPAAAW 206

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           E  ++ KLDLS+NSI++LP ELS C+SLQ+L+LS NKIK WP  +++SL  LS LKLDNN
Sbjct: 207 ETSDVVKLDLSKNSIEDLPNELSLCSSLQSLVLSNNKIKRWPHTVVSSLPCLSSLKLDNN 266

Query: 277 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
           PL ++ S     +  L++LDLS N ++LPE    S+LP LQELYLRRM+L E P  +L L
Sbjct: 267 PLVEISSTDLVPLSKLEVLDLSGNASALPEPSAVSALPQLQELYLRRMKLHEFPNGLLGL 326

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           + LRILDLSQN L ++PEG KN T+L ELDLSDNNI+ALP ELGLLE +LQ L+LDGNPL
Sbjct: 327 KLLRILDLSQNHLTTVPEGIKNFTALIELDLSDNNITALPAELGLLEANLQVLKLDGNPL 386

Query: 397 RSIRRTILDRGTKAVLKYLKDKIP 420
           RSIRRT+L+RGTKAVLKYLK+K+P
Sbjct: 387 RSIRRTLLERGTKAVLKYLKEKLP 410



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 44/170 (25%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ GN   +   + +++   L EL   +  L+  P  +  L  L  LDL QN + ++P 
Sbjct: 285 LDLSGNASALPEPSAVSALPQLQELYLRRMKLHEFPNGLLGLKLLRILDLSQNHLTTVPE 344

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I    +L E  + +N ++ALPAELG L                                
Sbjct: 345 GIKNFTALIELDLSDNNITALPAELGLLE------------------------------- 373

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
                          L+ L L GNPLR++R +L+   T A+LKYL+ +LP
Sbjct: 374 -------------ANLQVLKLDGNPLRSIRRTLLERGTKAVLKYLKEKLP 410


>gi|326493602|dbj|BAJ85262.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 223

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 134/223 (60%), Positives = 169/223 (75%)

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           EL+L G+ +  +P   WE  ++ KLDLS+N I++LP ELS C+SLQ LILS NKIK WP 
Sbjct: 1   ELNLSGLGVPNVPPAAWETSDVVKLDLSKNLIEDLPNELSLCSSLQALILSNNKIKKWPG 60

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 319
            +++SL SL+ LKLDNNPL  + S   + +  L++LDLS N +SL E    SSLP L EL
Sbjct: 61  MVVSSLPSLTSLKLDNNPLAAISSTDVESLSKLEVLDLSGNASSLTEPSVISSLPQLHEL 120

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
           YLRRM+L+  P  + +L+ LRIL LSQN L +IPEG K+ ++L ELDLSDNNI+ALP EL
Sbjct: 121 YLRRMKLQGFPIGLFQLKHLRILSLSQNHLTTIPEGIKDFSALVELDLSDNNITALPAEL 180

Query: 380 GLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
           GLLEPSLQ L+LDGNPLRSIRRT+L+RGTKAVL YLK+K+P N
Sbjct: 181 GLLEPSLQVLKLDGNPLRSIRRTVLERGTKAVLSYLKEKLPSN 223



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 90/181 (49%), Gaps = 24/181 (13%)

Query: 13  VLSNNLIASWT--------MLTELIASKNLLNGMPET-IGSLSRLIRLDLHQN-RILSIP 62
           +LSNN I  W          LT L    N L  +  T + SLS+L  LDL  N   L+ P
Sbjct: 49  ILSNNKIKKWPGMVVSSLPSLTSLKLDNNPLAAISSTDVESLSKLEVLDLSGNASSLTEP 108

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL-------KEYCVEACQLR 115
           S IS    L E Y+    L   P  L +L  L  L L  N L       K++        
Sbjct: 109 SVISSLPQLHELYLRRMKLQGFPIGLFQLKHLRILSLSQNHLTTIPEGIKDFSA------ 162

Query: 116 LSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           L  LDLS+N+++ LP E+G +  +L+ L L GNPLR++R +++   T A+L YL+ +LP 
Sbjct: 163 LVELDLSDNNITALPAELGLLEPSLQVLKLDGNPLRSIRRTVLERGTKAVLSYLKEKLPS 222

Query: 175 N 175
           N
Sbjct: 223 N 223


>gi|384249477|gb|EIE22958.1| L domain-like protein [Coccomyxa subellipsoidea C-169]
          Length = 521

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 181/426 (42%), Positives = 250/426 (58%), Gaps = 13/426 (3%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILSIP 62
           L+V  N+L+ +   ++     LT L  S+NL+ G +PE I  LSRL  LD+ +N++ ++P
Sbjct: 101 LNVSSNRLSSVPAGMLCGLRSLTSLNLSQNLIGGCLPEDISCLSRLSLLDVSRNKMTALP 160

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 122
             + GC +L E ++G N +  LP  L +LS L TL+L  N L+ +   AC L L++LDL+
Sbjct: 161 DGLGGCSALVELFLGYNDIEQLPPTLSQLSALRTLELRGNMLRSFPAAACSLTLTLLDLT 220

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N LS LPPE+G+MTTLR L ++GNP+R LR+   N P  +LL  L +RL E E  EA T
Sbjct: 221 DNDLSTLPPELGRMTTLRALPVSGNPIRGLRT---NQPLSSLLTSLHNRL-EEEPQEAET 276

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE-AGEITKLDLSRNSIQELPPE-LSS 240
                   A R++  S  ++L G  L+ +P+E+W+ A  +T LDLS N + EL  E L+ 
Sbjct: 277 AAASARAAAPRIAPRSAAVNLSGQQLTCVPAELWDSAACLTHLDLSNNQLSELLAERLAG 336

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM--LQILDLS 298
           CA L+ L LSRN++ DWP      L  L+ L L  NP     S G  D     LQ LDLS
Sbjct: 337 CAQLKVLNLSRNRLTDWPLP-RNVLPLLTQLDLSANPGICAISAGAFDCCAVSLQHLDLS 395

Query: 299 -YNIASLPENPPFSSLPHLQELYLRRMQLREAPT--DILRLQQLRILDLSQNSLQSIPEG 355
               A    N    SLP L  L L + +L   P          LR++D+S N +  +PE 
Sbjct: 396 GVPAAGGIANTMLVSLPKLATLKLAQCRLSSFPALPPAPGGDSLRVIDVSSNQISQVPEA 455

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
              L +L EL LS+N +S LPP+LGLL P L  L L+GNPLRSIRR IL+RGT+AVL+YL
Sbjct: 456 ISALRALEELCLSNNELSGLPPKLGLLAPKLHVLALEGNPLRSIRRPILERGTQAVLEYL 515

Query: 416 KDKIPE 421
           + +I E
Sbjct: 516 RGRIVE 521



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 5/208 (2%)

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           +++    L +    L  +P+ I     + +L +S N + +LP  ++   SL+ L  + N 
Sbjct: 1   MAINGGTLWIHQNELEELPAHIAALTSLKRLAVSGNRLSKLPDTVAEIHSLRHLECAGNA 60

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 312
           +   P A+ +    L  +   +N L Q+P  GF     L  L++S N ++S+P       
Sbjct: 61  LAVLPAALGSQQPHLQHVDASDNALTQLPG-GFAAAAGLLTLNVSSNRLSSVPAG-MLCG 118

Query: 313 LPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           L  L  L L +  +    P DI  L +L +LD+S+N + ++P+G    ++L EL L  N+
Sbjct: 119 LRSLTSLNLSQNLIGGCLPEDISCLSRLSLLDVSRNKMTALPDGLGGCSALVELFLGYND 178

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSI 399
           I  LPP L  L  +L+ L L GN LRS 
Sbjct: 179 IEQLPPTLSQLS-ALRTLELRGNMLRSF 205



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 38/209 (18%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN-RIL 59
           ++ LD+  N+L+ L    +A    L  L  S+N L   P     L  L +LDL  N  I 
Sbjct: 316 LTHLDLSNNQLSELLAERLAGCAQLKVLNLSRNRLTDWPLPRNVLPLLTQLDLSANPGIC 375

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELG-------KLSKLGTL--------------- 97
           +I +    CC+++  ++    LS +PA  G        L KL TL               
Sbjct: 376 AISAGAFDCCAVSLQHLD---LSGVPAAGGIANTMLVSLPKLATLKLAQCRLSSFPALPP 432

Query: 98  ----------DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT-TLRKLLLT 145
                     D+ SNQ+ +       LR L  L LSNN LSGLPP++G +   L  L L 
Sbjct: 433 APGGDSLRVIDVSSNQISQVPEAISALRALEELCLSNNELSGLPPKLGLLAPKLHVLALE 492

Query: 146 GNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           GNPLR++R  ++   T A+L+YLR R+ E
Sbjct: 493 GNPLRSIRRPILERGTQAVLEYLRGRIVE 521


>gi|440791488|gb|ELR12726.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 623

 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 154/435 (35%), Positives = 229/435 (52%), Gaps = 46/435 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP-----ETIGSLSRLIRLDLHQNRI 58
           LD+  NKLT L       W  L EL    N L G+P     +       L RLDL QNR+
Sbjct: 212 LDLSANKLTSLPAEARNGWGTLRELELRGNQLAGLPAVTSKDPTAGWPLLARLDLSQNRL 271

Query: 59  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA-CQLRLS 117
             +PS ++   SL E Y   N L +LPAEL  L+ L  LDL  N L  +  E    L L 
Sbjct: 272 RELPSDVALFYSLRELYAAKNLLQSLPAELNTLTSLAILDLKENSLTHFKKEHFSNLALQ 331

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
           +LDLS NSL  +PP +G+MTTL+ L + GNPL   +  +++  T  +LKYLR RLP ++ 
Sbjct: 332 ILDLSLNSLKTIPPALGRMTTLKTLAIAGNPLMGFKRGVIDQGTDEILKYLRFRLPPDDQ 391

Query: 178 SEASTTKEDLITMATR------LSVTSK-----ELSLEGMNLSAIPSEIWEAGEITKLDL 226
           ++ + T   LI  +        L +++K      LSL    L+A+P++I   G + +LDL
Sbjct: 392 AKQTATSFALIVESAYNERSHSLDLSAKFSSPSNLSLAKNGLTALPAQIEAFGRLRRLDL 451

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
             N +  LP EL  C  L+ LIL +N + + P  +                         
Sbjct: 452 GDNKLTALPLELGKCVLLEELILQKNSLTEIPAVVF------------------------ 487

Query: 287 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
            ++  L  LD+S+N I  LP  P  + L  L  L  R+  +R  P+++  L +L +LD+ 
Sbjct: 488 -ELTRLTELDISFNRITVLP--PGIAQLVSLTILRARQNSIRALPSELYMLPKLDVLDVF 544

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
            N ++++      LTSL  LDL  N+I  +PP+LGL+  SL++L L+GN +R+IR  IL 
Sbjct: 545 FNKIETLDVELTKLTSLRALDLGSNDIVTVPPQLGLMT-SLRSLNLEGNRIRAIRPAILQ 603

Query: 406 RGTKAVLKYLKDKIP 420
           +GT ++L+YL+++IP
Sbjct: 604 QGTSSLLEYLRNRIP 618



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 130/425 (30%), Positives = 182/425 (42%), Gaps = 57/425 (13%)

Query: 22  WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 81
           WT +    A++N +  +   +  L  L  LDL  N++  +P  ++    L    + NN L
Sbjct: 114 WTEVNTFCAAQNKIVSISPQLFQLENLTTLDLSHNKLARLPDEVANARQLVHLLLQNNEL 173

Query: 82  SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI-GKMTTL 139
             LP  LG LS L  L+L  N+L E       L R+ VLDLS N L+ LP E      TL
Sbjct: 174 CCLPEALGCLSALSNLNLAHNRLVELPATMALLPRIEVLDLSANKLTSLPAEARNGWGTL 233

Query: 140 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 199
           R+L L GN L  L +     PT       R  L +N   E  +           L  + +
Sbjct: 234 RELELRGNQLAGLPAVTSKDPTAGWPLLARLDLSQNRLRELPSD--------VALFYSLR 285

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           EL      L ++P+E+     +  LDL  NS+     E  S  +LQ L LS N +K  P 
Sbjct: 286 ELYAAKNLLQSLPAELNTLTSLAILDLKENSLTHFKKEHFSNLALQILDLSLNSLKTIPP 345

Query: 260 AILTSLSSLSCLKLDNNPL----RQVPSDGFKDI-------------------PMLQILD 296
           A L  +++L  L +  NPL    R V   G  +I                       I++
Sbjct: 346 A-LGRMTTLKTLAIAGNPLMGFKRGVIDQGTDEILKYLRFRLPPDDQAKQTATSFALIVE 404

Query: 297 LSYN--IASLPENPPFSS-------------LPHLQELY--LRRM-----QLREAPTDIL 334
            +YN    SL  +  FSS             LP   E +  LRR+     +L   P ++ 
Sbjct: 405 SAYNERSHSLDLSAKFSSPSNLSLAKNGLTALPAQIEAFGRLRRLDLGDNKLTALPLELG 464

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           +   L  L L +NSL  IP     LT LTELD+S N I+ LPP +  L  SL  LR   N
Sbjct: 465 KCVLLEELILQKNSLTEIPAVVFELTRLTELDISFNRITVLPPGIAQLV-SLTILRARQN 523

Query: 395 PLRSI 399
            +R++
Sbjct: 524 SIRAL 528



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 129/319 (40%), Gaps = 114/319 (35%)

Query: 214 EIWEAGEITKLDLSRNSIQE---------------------------------------L 234
           + W+   I+++DL+ N I+E                                       +
Sbjct: 71  QWWDRTPISRIDLTNNEIEEISTANLAQDDEAKPAKRKHLQELWTEVNTFCAAQNKIVSI 130

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLK 272
            P+L    +L TL LS NK+   PD +                      L  LS+LS L 
Sbjct: 131 SPQLFQLENLTTLDLSHNKLARLPDEVANARQLVHLLLQNNELCCLPEALGCLSALSNLN 190

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYN-------------------------IASLP-- 305
           L +N L ++P+     +P +++LDLS N                         +A LP  
Sbjct: 191 LAHNRLVELPAT-MALLPRIEVLDLSANKLTSLPAEARNGWGTLRELELRGNQLAGLPAV 249

Query: 306 -ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
               P +  P L  L L + +LRE P+D+     LR L  ++N LQS+P     LTSL  
Sbjct: 250 TSKDPTAGWPLLARLDLSQNRLRELPSDVALFYSLRELYAAKNLLQSLPAELNTLTSLAI 309

Query: 365 LDLSDNNIS-----------------------ALPPELGLLEPSLQALRLDGNPLRSIRR 401
           LDL +N+++                        +PP LG +  +L+ L + GNPL   +R
Sbjct: 310 LDLKENSLTHFKKEHFSNLALQILDLSLNSLKTIPPALGRMT-TLKTLAIAGNPLMGFKR 368

Query: 402 TILDRGTKAVLKYLKDKIP 420
            ++D+GT  +LKYL+ ++P
Sbjct: 369 GVIDQGTDEILKYLRFRLP 387


>gi|303282505|ref|XP_003060544.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458015|gb|EEH55313.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 782

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 159/462 (34%), Positives = 249/462 (53%), Gaps = 52/462 (11%)

Query: 4   LDVEGNKLTV-----LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 58
           LD+ GN L       L + L      + EL  S+N L+ +PE++G++ RL RLD  +N I
Sbjct: 324 LDLSGNLLGAGLAPDLPDALATGLVNVRELNVSRNRLSSLPESLGAMRRLARLDCRENEI 383

Query: 59  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV 118
             +P+S+ GC SLAE Y+G+N L+ +P E+G ++ L TLD+ +N LKE       + LS+
Sbjct: 384 RELPASVEGCDSLAELYLGHNRLATIPDEIGFVASLRTLDVSNNALKELRPSLANVPLSL 443

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED- 177
           LD S N +  + PE+G+  TLRKL+L GNPL+++R +++ GPT  LL +LRS+L +  D 
Sbjct: 444 LDASGNDIVAVAPELGRCVTLRKLMLEGNPLKSIRYNILAGPTRELLAHLRSKLSDERDD 503

Query: 178 ---SEASTTK-----EDLITMATRLSVTSKELSLEG---------MNLSAIPSEIWE--A 218
              + A+  K     +D + +A+  +  +  ++ EG           +  +P E W+  A
Sbjct: 504 VNAAAAAFGKVFIGADDAVVIAS--ATHADRVAFEGGRGTLLLRDRGVERVPIEAWDIVA 561

Query: 219 GEITKLDLSRNSIQ-----------ELPPELSSCASLQTLILSRNKIKDWP----DAILT 263
             +  +DL  N ++            L   +  C  L+TL+L  N +  WP    +A   
Sbjct: 562 TRVACVDLGLNGLKGDACGGGSNSDALATAVGKCKRLETLLLDGNDLSSWPLPHDNAPPL 621

Query: 264 SLSSLSCLKLDNNPL--RQVPSDG-FKDIPMLQILDLSYNI--ASLPENPPFSSLPHLQE 318
            L  +S   L NN      V + G F     +  LDLS  +  A   ++     L +L E
Sbjct: 622 PLLEMS---LANNARVGGAVQTRGVFSRASNMTRLDLSGVVIAARFVDDGLLGPLANLVE 678

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L   R  L   P D+  +++LR L L  N +  +      LT L ELDL++N++  LP E
Sbjct: 679 LRWARGDLTRVPEDVYWMRKLRALALPDNRIGELRAEVSELTQLDELDLTNNDLPNLPAE 738

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           LGL+   L+AL+++GN LR IRR IL+RGT+A+L+YL++K+P
Sbjct: 739 LGLV--PLRALKVEGNMLRMIRRPILERGTQALLEYLREKLP 778



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 11/72 (15%)

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
           WE  E+  LD SRN I  LP  ++S  +L+ L +S N        +LTSL  L+  +L  
Sbjct: 160 WERRELASLDASRNQIDSLPDRIASLTALEKLDVSHN--------VLTSLPGLALERL-- 209

Query: 276 NPLRQVPSDGFK 287
            PLR + + G K
Sbjct: 210 -PLRSLDASGNK 220


>gi|255085884|ref|XP_002505373.1| predicted protein [Micromonas sp. RCC299]
 gi|226520642|gb|ACO66631.1| predicted protein [Micromonas sp. RCC299]
          Length = 621

 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 154/443 (34%), Positives = 239/443 (53%), Gaps = 30/443 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N++  L + +      L +L  S N L  +P  +G+ + L RLD  +NRI  +P 
Sbjct: 180 LDISNNRIGTLPDGMT-RLASLRDLCVSGNALTALPRDVGAFTSLTRLDCRENRITCVPP 238

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLS 122
           SISGC +LAE ++G N L+ALP  LG  + L TLD+ SN+L E     A    L  +D S
Sbjct: 239 SISGCSNLAEIFIGRNELTALPDALGTCAALATLDVSSNRLTELPSSLAAGAPLRTVDAS 298

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE------ 176
            N ++ + PE+G+ T+LR+L L GNP+R++R ++++GP   LL +LRS+L   E      
Sbjct: 299 GNDVTRVAPELGRCTSLRRLALEGNPIRSIRQNILSGPIGDLLAHLRSKLGAEETGVGAA 358

Query: 177 --DSEASTTKEDLITMATRLSVTSKE------LSLEGMNLSAIPSEIWE--AGEITKLDL 226
               E++T  ED        +  + E      +SL G  L ++P + W   A  +T +DL
Sbjct: 359 FRGDESTTRAEDAARAVATAARVASEGGRASGVSLRGQRLESLPDDFWSVVARGVTSVDL 418

Query: 227 SRNSIQEL--PPELSSCASLQTLILSRNKIKDWP----DAILTSLSSLSCLKLDNNPLRQ 280
             N ++      E+  C  L+TL+L  N ++ WP    +    SL+ L+ L  +      
Sbjct: 419 GENGLRGGVDAEEVERCDGLETLLLDGNALEKWPLPCGEGRPLSLTELN-LAGNKGLSAA 477

Query: 281 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP---HLQELYLRRMQLREAPTDILRLQ 337
           +P   F     L+ LD++  I   P   P    P    L EL   +  L   P ++  L+
Sbjct: 478 MPPSAFSRASRLRKLDVT-GIVFQPSRGPNLLRPLAETLTELRWGKAMLDAIPDEVFDLR 536

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
           +LR+L L+ N + ++      L  L ELDL++N++  LPPELGLL   L+ L ++GN LR
Sbjct: 537 RLRVLRLNDNHIGALSPAVARLVELDELDLTNNDLGTLPPELGLLT-GLRWLGVEGNMLR 595

Query: 398 SIRRTILDRGTKAVLKYLKDKIP 420
            IRR +++RGTKA+L+YL+DK+P
Sbjct: 596 MIRRPVIERGTKALLEYLRDKLP 618



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 7/167 (4%)

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
           WE  E+T L  S NSI +LP +++   +LQ L L  N+++  P   L SL  L  L + +
Sbjct: 57  WEVKELTALVASHNSIAQLPEDVAKLNALQKLDLGHNQLESLPATALASLP-LRSLDVSD 115

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN--IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
           N LR +P D    +  L  L++S N  +  LPE+    +   L EL +    L E P  I
Sbjct: 116 NKLRMLP-DALP-VETLAALNVSRNPKLFKLPES--IGACDRLAELRVAGCALTELPRAI 171

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
                L  LD+S N + ++P+G   L SL +L +S N ++ALP ++G
Sbjct: 172 DGCTSLVTLDISNNRIGTLPDGMTRLASLRDLCVSGNALTALPRDVG 218



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 129/290 (44%), Gaps = 44/290 (15%)

Query: 20  ASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           A W +  LT L+AS N +  +PE +  L+ L +LDL  N++ S+P++      L    + 
Sbjct: 55  AWWEVKELTALVASHNSIAQLPEDVAKLNALQKLDLGHNQLESLPATALASLPLRSLDVS 114

Query: 78  NNALSALPAELGKLSKLGTLDLHSN--------------QLKEYCVEACQL--------- 114
           +N L  LP  L  +  L  L++  N              +L E  V  C L         
Sbjct: 115 DNKLRMLPDAL-PVETLAALNVSRNPKLFKLPESIGACDRLAELRVAGCALTELPRAIDG 173

Query: 115 --RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 172
              L  LD+SNN +  LP  + ++ +LR L ++GN L  L   +      A     R   
Sbjct: 174 CTSLVTLDISNNRIGTLPDGMTRLASLRDLCVSGNALTALPRDV-----GAFTSLTRLDC 228

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
            EN      T     I+  + L+    E+ +    L+A+P  +     +  LD+S N + 
Sbjct: 229 RENR----ITCVPPSISGCSNLA----EIFIGRNELTALPDALGTCAALATLDVSSNRLT 280

Query: 233 ELPPELSSCASLQTLILSRNKI-KDWPDAILTSLSSLSCLKLDNNPLRQV 281
           ELP  L++ A L+T+  S N + +  P+  L   +SL  L L+ NP+R +
Sbjct: 281 ELPSSLAAGAPLRTVDASGNDVTRVAPE--LGRCTSLRRLALEGNPIRSI 328



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 16/137 (11%)

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 318
           D +L S  S   L L +  + ++P   F D P                 P +  +  L  
Sbjct: 19  DKLLLSAQSTGVLNLSDRGMTEIPRAVF-DAPE-------------SGGPAWWEVKELTA 64

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L      + + P D+ +L  L+ LDL  N L+S+P        L  LD+SDN +  LP  
Sbjct: 65  LVASHNSIAQLPEDVAKLNALQKLDLGHNQLESLPATALASLPLRSLDVSDNKLRMLPDA 124

Query: 379 LGLLEPSLQALRLDGNP 395
           L +   +L AL +  NP
Sbjct: 125 LPV--ETLAALNVSRNP 139


>gi|156404169|ref|XP_001640280.1| predicted protein [Nematostella vectensis]
 gi|156227413|gb|EDO48217.1| predicted protein [Nematostella vectensis]
          Length = 602

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 148/414 (35%), Positives = 222/414 (53%), Gaps = 46/414 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L +L  S N +   P  + ++  L RLD  QN + S+PS +  C SL E Y+  N ++ L
Sbjct: 216 LDDLNISSNKICNFPGKLYNMKSLRRLDCRQNHLTSVPS-VGQCPSLKELYLAYNKIAEL 274

Query: 85  PAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 142
            ++     S L  LDLH N L     +   LR L  LDL+NN +SGLP +IG M+ L+ L
Sbjct: 275 DSKVFAGYSGLTVLDLHDNLLTSIPEDIIILRDLERLDLTNNDISGLPYKIGNMSNLKSL 334

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS----EASTTKEDLITMATRLSVT- 197
           +L GNPLR LR  +V   T A++K+L+SR+P+++ +    +AS      ++M +  +V  
Sbjct: 335 VLNGNPLRELRRDIVMRGTQAIMKHLKSRIPDDDGATDQPDASVAPLPSVSMGSSGAVVD 394

Query: 198 ------SKELSLEGMNLSAIPSEIWEAG---EITKLDLSRNSIQELPPELSS-CASLQTL 247
                 +K L+  G   ++IP E+ EA    E+  +D S+N + +LP  +++  +S+  L
Sbjct: 395 MHTLGHTKTLNYSGKKSASIPVEVLEAAVTSEVKTVDFSKNMLTDLPERITALSSSVSDL 454

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 307
            L  NKI   P  I  S + L  L L NN L  +P DGF  +  L+ + +SYN       
Sbjct: 455 NLGFNKITSLPSGI-CSFTQLEFLDLRNNQLSSLP-DGFASLRSLREIIISYN------- 505

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP-EGFKNLTSLTELD 366
             FS LP +  LY               +  LR L    N +  I  +G   ++ L  LD
Sbjct: 506 -RFSCLPPV--LY--------------SMTSLRTLLACDNQIAVIDVDGLLRMSVLETLD 548

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           L +NNIS +PPELG +   L+AL+L GNP R+ R  IL +GT+A+L+YL+D+IP
Sbjct: 549 LQNNNISQVPPELGNVR-GLKALQLGGNPFRTPRAAILAKGTQALLEYLRDRIP 601



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 168/331 (50%), Gaps = 44/331 (13%)

Query: 94  LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L  L L SN L E   +   L  L +LD+ +NSL+ LP EIG ++ L+KL L  N + +L
Sbjct: 79  LTKLILASNSLTEISGDVFNLPALVLLDIHDNSLTTLPEEIGSLSCLQKLNLGHNKISSL 138

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
             S+    +   LK            E ++ K     + +  ++  +EL +    +S++P
Sbjct: 139 PMSMAQLESLCSLKL-----------EHNSFKSLECWLGSLRNL--EELDVSYNMVSSLP 185

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
           S +     +  L+LS N+++ LPPE     +L  L +S NKI ++P   L ++ SL  L 
Sbjct: 186 S-LAGLKHLRTLNLSNNALEMLPPEFDHLQALDDLNISSNKICNFPGK-LYNMKSLRRLD 243

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
              N L  VPS G                            P L+ELYL   ++ E  + 
Sbjct: 244 CRQNHLTSVPSVG--------------------------QCPSLKELYLAYNKIAELDSK 277

Query: 333 ILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           +      L +LDL  N L SIPE    L  L  LDL++N+IS LP ++G +  +L++L L
Sbjct: 278 VFAGYSGLTVLDLHDNLLTSIPEDIIILRDLERLDLTNNDISGLPYKIGNMS-NLKSLVL 336

Query: 392 DGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
           +GNPLR +RR I+ RGT+A++K+LK +IP++
Sbjct: 337 NGNPLRELRRDIVMRGTQAIMKHLKSRIPDD 367



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 96/173 (55%), Gaps = 4/173 (2%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D   N LT L   + A  + +++L    N +  +P  I S ++L  LDL  N++ S+P 
Sbjct: 430 VDFSKNMLTDLPERITALSSSVSDLNLGFNKITSLPSGICSFTQLEFLDLRNNQLSSLPD 489

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL---D 120
             +   SL E  +  N  S LP  L  ++ L TL    NQ+    V+   LR+SVL   D
Sbjct: 490 GFASLRSLREIIISYNRFSCLPPVLYSMTSLRTLLACDNQIAVIDVDGL-LRMSVLETLD 548

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L NN++S +PPE+G +  L+ L L GNP RT R++++   T ALL+YLR R+P
Sbjct: 549 LQNNNISQVPPELGNVRGLKALQLGGNPFRTPRAAILAKGTQALLEYLRDRIP 601


>gi|443730785|gb|ELU16143.1| hypothetical protein CAPTEDRAFT_182426 [Capitella teleta]
          Length = 610

 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 140/436 (32%), Positives = 230/436 (52%), Gaps = 47/436 (10%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           K ++  N L V+ +  I+    L  L A+ N L+ +P+ +G L++L +L L  NR+  +P
Sbjct: 203 KFNMSNNNLNVIVHE-ISGMQGLRTLDATHNQLHTLPDDLGHLNKLEQLYLRHNRLTHLP 261

Query: 63  SSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 120
           S +  C +L E ++GNNA+  L  E L ++  +  LDL  N+L +   E   L+ L  LD
Sbjct: 262 S-LQHCTALKELHLGNNAIQGLSEEQLREMHSVSVLDLRDNRLTKVPSEIVLLQMLERLD 320

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS-- 178
           L+NN++S LP E+G +  L+ ++L GNPL+++R  ++   T  L KYLRSR+ E+  +  
Sbjct: 321 LTNNNISALPYELGTLPNLKSIVLDGNPLKSIRRDIIMRGTNELKKYLRSRMAESAPTAP 380

Query: 179 ----EASTTKEDLITMAT-----RLSVTSKELSLEGMNLSAIPSEIW---EAGEITKLDL 226
               ++S     ++  A+      L  +SK L      ++AIP E+W   ++G +T ++ 
Sbjct: 381 QSAVQSSKGTSGIVGGASSGVDPHLVSSSKALDYSEKKVTAIPDELWAVAQSGGVTIVNF 440

Query: 227 SRNSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           S+N + + P ++ S   SL  L LS NK+    DA +  LS L  L L  N L  +P++ 
Sbjct: 441 SKNQLTQYPKQIESLKDSLCELNLSFNKLTTI-DASIGCLSRLVMLDLGGNQLLSLPAE- 498

Query: 286 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
                                    S+   L+EL +   +    P+ +  L  L I+   
Sbjct: 499 ------------------------LSNASSLRELVISFNRFTSIPSVVYSLPCLEIILAG 534

Query: 346 QNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
            N +  I  +G K+L  L  LDL +N+I  +PPELGL+   L++L+L+GN +R  R  IL
Sbjct: 535 SNQIAEIDAQGLKSLAQLATLDLQNNDIRQVPPELGLVT-QLRSLQLEGNAIRQPRPAIL 593

Query: 405 DRGTKAVLKYLKDKIP 420
            +GT A+L+YL+ +IP
Sbjct: 594 SKGTLAILEYLRGRIP 609



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 166/353 (47%), Gaps = 66/353 (18%)

Query: 71  LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 129
           L++  + +NAL++L  ++ +L  L  LD+H NQL       CQL  L  L+LS+NSL  L
Sbjct: 86  LSKLILASNALTSLSEDIAQLPALTVLDVHDNQLNSLPEALCQLENLQKLNLSHNSLKAL 145

Query: 130 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 189
           P  I ++  L+ L +  N L  L   +              RL   E+ +AS  K     
Sbjct: 146 PESICQLPRLQFLYIQNNQLEALPEDI-------------GRLALLEELDASHNK----- 187

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
                             L  +P+ I     + K ++S N++  +  E+S    L+TL  
Sbjct: 188 ------------------LPTLPTSIKFLERVMKFNMSNNNLNVIVHEISGMQGLRTLDA 229

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 308
           + N++   PD  L  L+ L  L L +N L  +PS   +    L+ L L  N I  L E  
Sbjct: 230 THNQLHTLPDD-LGHLNKLEQLYLRHNRLTHLPS--LQHCTALKELHLGNNAIQGLSEE- 285

Query: 309 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 368
                           QLRE       +  + +LDL  N L  +P     L  L  LDL+
Sbjct: 286 ----------------QLRE-------MHSVSVLDLRDNRLTKVPSEIVLLQMLERLDLT 322

Query: 369 DNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
           +NNISALP ELG L P+L+++ LDGNPL+SIRR I+ RGT  + KYL+ ++ E
Sbjct: 323 NNNISALPYELGTL-PNLKSIVLDGNPLKSIRRDIIMRGTNELKKYLRSRMAE 374



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 189/419 (45%), Gaps = 29/419 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +SKL +  N LT LS + IA    LT L    N LN +PE +  L  L +L+L  N + +
Sbjct: 86  LSKLILASNALTSLSED-IAQLPALTVLDVHDNQLNSLPEALCQLENLQKLNLSHNSLKA 144

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P SI     L   Y+ NN L ALP ++G+L+ L  LD   N+L         L R+   
Sbjct: 145 LPESICQLPRLQFLYIQNNQLEALPEDIGRLALLEELDASHNKLPTLPTSIKFLERVMKF 204

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           ++SNN+L+ +  EI  M  LR L  T N L TL   L +      L    +RL      +
Sbjct: 205 NMSNNNLNVIVHEISGMQGLRTLDATHNQLHTLPDDLGHLNKLEQLYLRHNRLTHLPSLQ 264

Query: 180 ASTTKEDLITMATRLSVTSKE----------LSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
             T  ++L      +   S+E          L L    L+ +PSEI     + +LDL+ N
Sbjct: 265 HCTALKELHLGNNAIQGLSEEQLREMHSVSVLDLRDNRLTKVPSEIVLLQMLERLDLTNN 324

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDW-PDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           +I  LP EL +  +L++++L  N +K    D I+   + L         LR   ++    
Sbjct: 325 NISALPYELGTLPNLKSIVLDGNPLKSIRRDIIMRGTNELKKY------LRSRMAESAPT 378

Query: 289 IPMLQILDLSYNIASLPENPPFSSLPHL----QELYLRRMQLREAPTDILRLQQ---LRI 341
            P   +   S   + +         PHL    + L     ++   P ++  + Q   + I
Sbjct: 379 APQSAVQS-SKGTSGIVGGASSGVDPHLVSSSKALDYSEKKVTAIPDELWAVAQSGGVTI 437

Query: 342 LDLSQNSLQSIPEGFKNLT-SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           ++ S+N L   P+  ++L  SL EL+LS N ++ +   +G L   L  L L GN L S+
Sbjct: 438 VNFSKNQLTQYPKQIESLKDSLCELNLSFNKLTTIDASIGCLS-RLVMLDLGGNQLLSL 495


>gi|427794931|gb|JAA62917.1| Putative mitotic protein, partial [Rhipicephalus pulchellus]
          Length = 601

 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 137/419 (32%), Positives = 213/419 (50%), Gaps = 45/419 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I S   L  L  S N L  +PE+IGSL  L +L   QN + ++P   + C  L E ++GN
Sbjct: 210 IGSMNALQILDVSSNRLRSLPESIGSLCHLEQLFAQQNELTALPP-FTSCGRLMELHVGN 268

Query: 79  NALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           NA+   P E +  L  L TLDL SN+L     +   ++ L  LDLSNN+L+ LP E+G +
Sbjct: 269 NAMEEFPIEVIETLLSLKTLDLKSNKLSTLSPDITMIQGLERLDLSNNNLASLPYELGTL 328

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS---------TTKEDL 187
             L+ L + GNPLR +R  +V   T  LLK+L+ RL E+ +  A              DL
Sbjct: 329 VHLKGLGVEGNPLRAIRRDIVKRGTVHLLKWLQDRLGESPEGAARKRLSGGAALNDGSDL 388

Query: 188 ITMATRLSV-TSKELSLEGMNLSAIPSEIWEAG---EITKLDLSRNSIQELPPEL-SSCA 242
           I    + ++ T+  L L   +L  +P EI++     +   +DLS+N+++ +P  L ++C 
Sbjct: 389 IESIEKFALKTTHALELSKRSLHDVPEEIFKMAAECDANTIDLSKNALESVPKGLEAACP 448

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
            +  L LS NK+   P   L   + L+ L L NN L  +P +                  
Sbjct: 449 VVTELNLSFNKLTALP-GFLCLATRLTFLDLRNNQLSDLPGE------------------ 489

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTS 361
                   S L +++E+ L   +    P  +   Q L IL  S N ++ +     + L  
Sbjct: 490 -------MSVLSNVREVSLSFNRFSRIPEVVTSWQSLEILFASDNKIEELDTTQLQKLKH 542

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           +  LDL +N+I  +PPELG +   L++L+L+GNP R+ R  IL +GT A+L++L+D+IP
Sbjct: 543 IAVLDLRNNSIRQVPPELGNMR-QLRSLQLEGNPFRNPRPAILSKGTPALLEFLRDRIP 600



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 155/306 (50%), Gaps = 44/306 (14%)

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
           +L+L++N+L+ LP  IG +  L KL ++ N L+ L  S         LK LR  L  + D
Sbjct: 103 ILELNDNALTSLPDTIGNLHHLTKLNISRNKLQRLPDSFYQ------LKELRQLLAHHND 156

Query: 178 -SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E S    +L  +          + L    LS++P+ I        ++LS NS+ ELPP
Sbjct: 157 IAELSDDIGNLSLLEL--------VDLSHNKLSSLPAMIGFLSRAANVNLSHNSLAELPP 208

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+ S  +LQ L +S N+++  P++I  SL  L  L    N L  +P              
Sbjct: 209 EIGSMNALQILDVSSNRLRSLPESI-GSLCHLEQLFAQQNELTALP-------------- 253

Query: 297 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIPEG 355
                       PF+S   L EL++    + E P +++  L  L+ LDL  N L ++   
Sbjct: 254 ------------PFTSCGRLMELHVGNNAMEEFPIEVIETLLSLKTLDLKSNKLSTLSPD 301

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
              +  L  LDLS+NN+++LP ELG L   L+ L ++GNPLR+IRR I+ RGT  +LK+L
Sbjct: 302 ITMIQGLERLDLSNNNLASLPYELGTL-VHLKGLGVEGNPLRAIRRDIVKRGTVHLLKWL 360

Query: 416 KDKIPE 421
           +D++ E
Sbjct: 361 QDRLGE 366



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 175/376 (46%), Gaps = 42/376 (11%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +P+TIG+L  L +L++ +N++  +P S      L +    +N ++ L  ++G LS
Sbjct: 109 NALTSLPDTIGNLHHLTKLNISRNKLQRLPDSFYQLKELRQLLAHHNDIAELSDDIGNLS 168

Query: 93  KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
            L  +DL  N+L         L R + ++LS+NSL+ LPPEIG M  L+ L ++ N LR+
Sbjct: 169 LLELVDLSHNKLSSLPAMIGFLSRAANVNLSHNSLAELPPEIGSMNALQILDVSSNRLRS 228

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
           L  S+        L +L     +  +  A        T   RL     EL +    +   
Sbjct: 229 LPESI------GSLCHLEQLFAQQNELTALPP----FTSCGRL----MELHVGNNAMEEF 274

Query: 212 PSEIWEA-GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           P E+ E    +  LDL  N +  L P+++    L+ L LS N +   P   L +L  L  
Sbjct: 275 PIEVIETLLSLKTLDLKSNKLSTLSPDITMIQGLERLDLSNNNLASLPYE-LGTLVHLKG 333

Query: 271 LKLDNNPLRQVPSDGFK--DIPMLQILD--------------LSYNIA-----SLPENPP 309
           L ++ NPLR +  D  K   + +L+ L               LS   A      L E+  
Sbjct: 334 LGVEGNPLRAIRRDIVKRGTVHLLKWLQDRLGESPEGAARKRLSGGAALNDGSDLIESIE 393

Query: 310 FSSLPHLQELYLRRMQLREAPTDILRLQ---QLRILDLSQNSLQSIPEGFKNLT-SLTEL 365
             +L     L L +  L + P +I ++        +DLS+N+L+S+P+G +     +TEL
Sbjct: 394 KFALKTTHALELSKRSLHDVPEEIFKMAAECDANTIDLSKNALESVPKGLEAACPVVTEL 453

Query: 366 DLSDNNISALPPELGL 381
           +LS N ++ALP  L L
Sbjct: 454 NLSFNKLTALPGFLCL 469



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 6/174 (3%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D+  N L  +   L A+  ++TEL  S N L  +P  +   +RL  LDL  N++  +P 
Sbjct: 429 IDLSKNALESVPKGLEAACPVVTELNLSFNKLTALPGFLCLATRLTFLDLRNNQLSDLPG 488

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVL 119
            +S   ++ E  +  N  S +P  +     L  L    N+++E  ++  QL+    ++VL
Sbjct: 489 EMSVLSNVREVSLSFNRFSRIPEVVTSWQSLEILFASDNKIEE--LDTTQLQKLKHIAVL 546

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           DL NNS+  +PPE+G M  LR L L GNP R  R ++++  TPALL++LR R+P
Sbjct: 547 DLRNNSIRQVPPELGNMRQLRSLQLEGNPFRNPRPAILSKGTPALLEFLRDRIP 600


>gi|427794929|gb|JAA62916.1| Putative mitotic protein, partial [Rhipicephalus pulchellus]
          Length = 601

 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 137/419 (32%), Positives = 213/419 (50%), Gaps = 45/419 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I S   L  L  S N L  +PE+IGSL  L +L   QN + ++P   + C  L E ++GN
Sbjct: 210 IGSMNALQILDVSSNRLRSLPESIGSLCHLEQLFAQQNELTALPP-FTSCGRLMELHVGN 268

Query: 79  NALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           NA+   P E +  L  L TLDL SN+L     +   ++ L  LDLSNN+L+ LP E+G +
Sbjct: 269 NAMEEFPIEVIETLLSLKTLDLKSNKLSTLSPDITMIQGLERLDLSNNNLASLPYELGTL 328

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS---------TTKEDL 187
             L+ L + GNPLR +R  +V   T  LLK+L+ RL E+ +  A              DL
Sbjct: 329 VHLKGLGVEGNPLRAIRRDIVKRGTVHLLKWLQDRLGESPEGAARKRLSGGAGLNDGSDL 388

Query: 188 ITMATRLSV-TSKELSLEGMNLSAIPSEIWEAG---EITKLDLSRNSIQELPPEL-SSCA 242
           I    + ++ T+  L L   +L  +P EI++     +   +DLS+N+++ +P  L ++C 
Sbjct: 389 IESIEKFALKTTHALELSKRSLHDVPEEIFKMAAECDANTIDLSKNALESVPKGLEAACP 448

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
            +  L LS NK+   P   L   + L+ L L NN L  +P +                  
Sbjct: 449 VVTELNLSFNKLTALP-GFLCLATRLTFLDLRNNQLSDLPGE------------------ 489

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTS 361
                   S L +++E+ L   +    P  +   Q L IL  S N ++ +     + L  
Sbjct: 490 -------MSVLSNVREVSLSFNRFSRIPEVVTSWQSLEILFASDNKIEELDTTQLQKLKH 542

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           +  LDL +N+I  +PPELG +   L++L+L+GNP R+ R  IL +GT A+L++L+D+IP
Sbjct: 543 IAVLDLRNNSIRQVPPELGNMR-QLRSLQLEGNPFRNPRPAILSKGTPALLEFLRDRIP 600



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 155/306 (50%), Gaps = 44/306 (14%)

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
           +L+L++N+L+ LP  IG +  L KL ++ N L+ L  S         LK LR  L  + D
Sbjct: 103 ILELNDNALTSLPDTIGNLHHLTKLNISRNKLQRLPDSFYQ------LKELRQLLAHHND 156

Query: 178 -SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E S    +L  +          + L    LS++P+ I        ++LS NS+ ELPP
Sbjct: 157 IAELSDDIGNLSLLEL--------VDLSHNKLSSLPAMIGFLSRAANVNLSHNSLAELPP 208

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+ S  +LQ L +S N+++  P++I  SL  L  L    N L  +P              
Sbjct: 209 EIGSMNALQILDVSSNRLRSLPESI-GSLCHLEQLFAQQNELTALP-------------- 253

Query: 297 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIPEG 355
                       PF+S   L EL++    + E P +++  L  L+ LDL  N L ++   
Sbjct: 254 ------------PFTSCGRLMELHVGNNAMEEFPIEVIETLLSLKTLDLKSNKLSTLSPD 301

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
              +  L  LDLS+NN+++LP ELG L   L+ L ++GNPLR+IRR I+ RGT  +LK+L
Sbjct: 302 ITMIQGLERLDLSNNNLASLPYELGTL-VHLKGLGVEGNPLRAIRRDIVKRGTVHLLKWL 360

Query: 416 KDKIPE 421
           +D++ E
Sbjct: 361 QDRLGE 366



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 170/376 (45%), Gaps = 42/376 (11%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +P+TIG+L  L +L++ +N++  +P S      L +    +N ++ L  ++G LS
Sbjct: 109 NALTSLPDTIGNLHHLTKLNISRNKLQRLPDSFYQLKELRQLLAHHNDIAELSDDIGNLS 168

Query: 93  KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
            L  +DL  N+L         L R + ++LS+NSL+ LPPEIG M  L+ L ++ N LR+
Sbjct: 169 LLELVDLSHNKLSSLPAMIGFLSRAANVNLSHNSLAELPPEIGSMNALQILDVSSNRLRS 228

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
           L  S+        L +L     +  +  A        T   RL     EL +    +   
Sbjct: 229 LPESI------GSLCHLEQLFAQQNELTALPP----FTSCGRL----MELHVGNNAMEEF 274

Query: 212 PSEIWEA-GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           P E+ E    +  LDL  N +  L P+++    L+ L LS N +   P   L +L  L  
Sbjct: 275 PIEVIETLLSLKTLDLKSNKLSTLSPDITMIQGLERLDLSNNNLASLPYE-LGTLVHLKG 333

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFS------------------- 311
           L ++ NPLR +  D  K   +  +  L   +   PE                        
Sbjct: 334 LGVEGNPLRAIRRDIVKRGTVHLLKWLQDRLGESPEGAARKRLSGGAGLNDGSDLIESIE 393

Query: 312 --SLPHLQELYLRRMQLREAPTDILRLQ---QLRILDLSQNSLQSIPEGFKNLT-SLTEL 365
             +L     L L +  L + P +I ++        +DLS+N+L+S+P+G +     +TEL
Sbjct: 394 KFALKTTHALELSKRSLHDVPEEIFKMAAECDANTIDLSKNALESVPKGLEAACPVVTEL 453

Query: 366 DLSDNNISALPPELGL 381
           +LS N ++ALP  L L
Sbjct: 454 NLSFNKLTALPGFLCL 469



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 6/174 (3%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D+  N L  +   L A+  ++TEL  S N L  +P  +   +RL  LDL  N++  +P 
Sbjct: 429 IDLSKNALESVPKGLEAACPVVTELNLSFNKLTALPGFLCLATRLTFLDLRNNQLSDLPG 488

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVL 119
            +S   ++ E  +  N  S +P  +     L  L    N+++E  ++  QL+    ++VL
Sbjct: 489 EMSVLSNVREVSLSFNRFSRIPEVVTSWQSLEILFASDNKIEE--LDTTQLQKLKHIAVL 546

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           DL NNS+  +PPE+G M  LR L L GNP R  R ++++  TPALL++LR R+P
Sbjct: 547 DLRNNSIRQVPPELGNMRQLRSLQLEGNPFRNPRPAILSKGTPALLEFLRDRIP 600


>gi|196008717|ref|XP_002114224.1| hypothetical protein TRIADDRAFT_27850 [Trichoplax adhaerens]
 gi|190583243|gb|EDV23314.1| hypothetical protein TRIADDRAFT_27850 [Trichoplax adhaerens]
          Length = 608

 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 142/429 (33%), Positives = 223/429 (51%), Gaps = 43/429 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++  NKL VL +  IA    L +L  S N +  +      L++L RLD+  N I  +P 
Sbjct: 209 LNMSNNKLEVLPSE-IAFMKGLKDLNISSNKIKELKVDFQLLNKLERLDIRCNHIEEVPV 267

Query: 64  SISGCCSLAEFYMGNNAL-SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 121
             S   +L E Y+G+N + + L + L KLS +  +D+  N+++    E   ++ L   DL
Sbjct: 268 -FSTDNTLKELYLGSNRIKNLLGSTLQKLSVVAIMDMSENKIEFVPDEVVNMKQLERFDL 326

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR----LPENED 177
           +NN +SGLP  +G MT L+ L+L GNPLRTLR  +V   T A+LK+LRSR    +P+   
Sbjct: 327 TNNDISGLPCNMGNMTQLKSLILNGNPLRTLRRDIVQRGTVAILKFLRSRIAGTIPDLAS 386

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE--AG--EITKLDLSRNSIQE 233
           S  + T+ +    AT  S  S   + E    S IP ++W   AG  +I  +D  +N +  
Sbjct: 387 SVDTNTQGNTRINATHSSTGSNVDASEKT--SEIPGDLWSVVAGSDQIRVVDFRKNVLTT 444

Query: 234 LP-PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
           +P P +   + ++ L LS NK+   P + + + + L+ L L NN L  +P +        
Sbjct: 445 VPEPLIEFSSRIEELYLSSNKLSQLPSS-MANFTKLTYLDLGNNQLGNLPIE-------- 495

Query: 293 QILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
                              S+  L+E+ L   +    P+ I  L  L +L  + N ++SI
Sbjct: 496 -----------------MESMTKLREIILSNNRFAAIPSVIYTLSSLEVLLATDNKIESI 538

Query: 353 P-EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAV 411
              G K L+ L+ LDL +N+I  +PPELG L+ +L++L+L GN  R  R  IL +GT AV
Sbjct: 539 DVSGLKQLSELSVLDLQNNDIKEVPPELGTLK-ALKSLQLGGNLFRIPRAAILSKGTFAV 597

Query: 412 LKYLKDKIP 420
           ++YL+ +IP
Sbjct: 598 MEYLRGRIP 606



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 168/310 (54%), Gaps = 23/310 (7%)

Query: 113 QLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 172
           Q+ LS LDLS+N L  +  ++  +  L  L +  N L  +         P  ++ L+   
Sbjct: 88  QVELSKLDLSSNQLKAISDDVKLLNALVALDIRDNQLENI---------PESVRELQ--- 135

Query: 173 PENEDSEASTTKEDLITM--ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
              + S+ + ++  L+ +  AT   +  K L LE   L+ +PSEI     +  LD+S N 
Sbjct: 136 ---QLSKLALSRNALVGLPNATCDLINLKSLMLEHNKLTELPSEIGNLLHLEILDISNNQ 192

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           + ELP  +   A L+ L +S NK++  P  I   +  L  L + +N ++++  D F+ + 
Sbjct: 193 LSELPHSIQKLACLKFLNMSNNKLEVLPSEI-AFMKGLKDLNISSNKIKELKVD-FQLLN 250

Query: 291 MLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDIL-RLQQLRILDLSQNSL 349
            L+ LD+  N   + E P FS+   L+ELYL   +++      L +L  + I+D+S+N +
Sbjct: 251 KLERLDIRCN--HIEEVPVFSTDNTLKELYLGSNRIKNLLGSTLQKLSVVAIMDMSENKI 308

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTK 409
           + +P+   N+  L   DL++N+IS LP  +G +   L++L L+GNPLR++RR I+ RGT 
Sbjct: 309 EFVPDEVVNMKQLERFDLTNNDISGLPCNMGNM-TQLKSLILNGNPLRTLRRDIVQRGTV 367

Query: 410 AVLKYLKDKI 419
           A+LK+L+ +I
Sbjct: 368 AILKFLRSRI 377



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 27/185 (14%)

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
           W+  E++KLDLS N ++ +  ++    +L  L +  N++++ P+++   L  LS L L  
Sbjct: 86  WDQVELSKLDLSSNQLKAISDDVKLLNALVALDIRDNQLENIPESV-RELQQLSKLALSR 144

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
           N L  +P+                             L +L+ L L   +L E P++I  
Sbjct: 145 NALVGLPN-------------------------ATCDLINLKSLMLEHNKLTELPSEIGN 179

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L  L ILD+S N L  +P   + L  L  L++S+N +  LP E+  ++  L+ L +  N 
Sbjct: 180 LLHLEILDISNNQLSELPHSIQKLACLKFLNMSNNKLEVLPSEIAFMK-GLKDLNISSNK 238

Query: 396 LRSIR 400
           ++ ++
Sbjct: 239 IKELK 243



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 78/181 (43%), Gaps = 29/181 (16%)

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFK----------------------DIPMLQIL 295
           P+A+L        L L N  L +VP D ++                      D   L  L
Sbjct: 35  PNALLKQARKSGSLNLSNRSLAEVPDDVWRINLDASKSQQSSSMDNDQDRWWDQVELSKL 94

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           DLS N + ++ ++     L  L  L +R  QL   P  +  LQQL  L LS+N+L  +P 
Sbjct: 95  DLSSNQLKAISDDVKL--LNALVALDIRDNQLENIPESVRELQQLSKLALSRNALVGLPN 152

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
              +L +L  L L  N ++ LP E+G L   L+ L +  N L  +  +I      A LK+
Sbjct: 153 ATCDLINLKSLMLEHNKLTELPSEIGNL-LHLEILDISNNQLSELPHSI---QKLACLKF 208

Query: 415 L 415
           L
Sbjct: 209 L 209


>gi|421097204|ref|ZP_15557898.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410799695|gb|EKS01761.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 671

 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 148/431 (34%), Positives = 216/431 (50%), Gaps = 50/431 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+L  L  + I     L EL  S N L  +PE IG+L  L  L L+ N++ +
Sbjct: 70  LQELDLSHNQLQALPED-IGQLQNLRELYLSDNKLEALPEDIGNLKNLRTLHLYNNQLKT 128

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----- 115
           +P  I    +L E Y+ +N L ALP ++G L  L  LDL  NQLK    E  +L+     
Sbjct: 129 LPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNQLKTLPEEIGKLQNLQEL 188

Query: 116 -------------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
                              L +LDLS N L  LP EIGK+  L KL L+ N L TL   +
Sbjct: 189 YLSDNKLEALPEDIGNLKNLQILDLSRNKLEALPKEIGKLRNLPKLDLSHNQLETLPEEI 248

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                  +L    ++L         T  E++  +        +EL L    L A+P EI 
Sbjct: 249 GQLQNLQILDLRYNQL--------ETLPEEIGQLQ-----NLRELHLYNNKLKALPKEIG 295

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           +   +  L+LS N ++ LP E+ +  +L+TL L  N +K  P+ I   L +L  L L +N
Sbjct: 296 KLKNLRTLNLSTNKLEALPEEIGNLKNLRTLNLQYNPLKTLPEEI-GKLQNLPELDLSHN 354

Query: 277 PLRQVPSDGFKDIPMLQ---ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
            L  +P    K+I  LQ    LDLS+N + +LP+      L +L+EL+L   QL   P +
Sbjct: 355 KLEALP----KEIGQLQNLPKLDLSHNQLQALPK--EIGQLQNLRELHLYNNQLETLPEE 408

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
           I +LQ L+ILDLS N L+++P+    L +L  LDL  N + ALP E+G L+ +LQ L L 
Sbjct: 409 IGKLQNLQILDLSHNKLEALPKEIGQLQNLQILDLRYNQLEALPKEIGKLQ-NLQELNLR 467

Query: 393 GNPLRSIRRTI 403
            N L ++ + I
Sbjct: 468 YNKLEALPKEI 478



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 142/402 (35%), Positives = 206/402 (51%), Gaps = 21/402 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+L  L    I     L EL    N L  +P+ IG L  L  L+L  N++ ++P 
Sbjct: 257 LDLRYNQLETLPEE-IGQLQNLRELHLYNNKLKALPKEIGKLKNLRTLNLSTNKLEALPE 315

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    +  N L  LP E+GKL  L  LDL  N+L+    E  QL+ L  LDLS
Sbjct: 316 EIGNLKNLRTLNLQYNPLKTLPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLS 375

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N L  LP EIG++  LR+L L  N L TL   +       +L    ++L        + 
Sbjct: 376 HNQLQALPKEIGQLQNLRELHLYNNQLETLPEEIGKLQNLQILDLSHNKL-------EAL 428

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
            KE  I     L +    L L    L A+P EI +   + +L+L  N ++ LP E+    
Sbjct: 429 PKE--IGQLQNLQI----LDLRYNQLEALPKEIGKLQNLQELNLRYNKLEALPKEIGKLK 482

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +LQ L L  N++K  P  I   L +L  L L  N L+ +P D  K +  L+ LDL  N +
Sbjct: 483 NLQKLNLQYNQLKTLPKEI-GKLKNLQKLNLQYNQLKTLPKDIGK-LKNLRELDLRNNQL 540

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
            +LP+      L +LQEL LR  +L   P +I +L+ L+IL LS N LQ++P+  + L +
Sbjct: 541 KTLPK--EIGKLQNLQELNLRYNKLETLPKEIGKLRNLKILYLSHNQLQALPKEIEKLVN 598

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L +L LS N + ALP E+G L+ +LQ L L  NPL+++ + I
Sbjct: 599 LRKLYLSGNQLQALPKEIGKLQ-NLQGLDLGNNPLKTLPKDI 639



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 142/401 (35%), Positives = 202/401 (50%), Gaps = 21/401 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  NKL  L    I     L  L  S N L  +PE IG+L  L  L+L  N + +
Sbjct: 277 LRELHLYNNKLKALPKE-IGKLKNLRTLNLSTNKLEALPEEIGNLKNLRTLNLQYNPLKT 335

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  + +N L ALP E+G+L  L  LDL  NQL+    E  QL+ L  L
Sbjct: 336 LPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQALPKEIGQLQNLREL 395

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L NN L  LP EIGK+  L+ L L+ N L  L   +       +L    ++L       
Sbjct: 396 HLYNNQLETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQNLQILDLRYNQL------- 448

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L     +L    +EL+L    L A+P EI +   + KL+L  N ++ LP E+ 
Sbjct: 449 -----EALPKEIGKLQ-NLQELNLRYNKLEALPKEIGKLKNLQKLNLQYNQLKTLPKEIG 502

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +LQ L L  N++K  P  I   L +L  L L NN L+ +P +  K +  LQ L+L Y
Sbjct: 503 KLKNLQKLNLQYNQLKTLPKDI-GKLKNLRELDLRNNQLKTLPKEIGK-LQNLQELNLRY 560

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N + +LP+      L +L+ LYL   QL+  P +I +L  LR L LS N LQ++P+    
Sbjct: 561 NKLETLPK--EIGKLRNLKILYLSHNQLQALPKEIEKLVNLRKLYLSGNQLQALPKEIGK 618

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L +L  LDL +N +  LP ++G L+ SLQ L LD   L S+
Sbjct: 619 LQNLQGLDLGNNPLKTLPKDIGKLK-SLQTLCLDNKQLESL 658



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 179/364 (49%), Gaps = 42/364 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L EL  S N L  +P+ IG L  L +LDL  N++ ++P  I    +L E ++ N
Sbjct: 340 IGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQALPKEIGQLQNLRELHLYN 399

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP E+GKL  L  LDL  N+L+    E  QL+ L +LDL  N L  LP EIGK+ 
Sbjct: 400 NQLETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQNLQILDLRYNQLEALPKEIGKLQ 459

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L++L L  N L  L   +        LK L+                            
Sbjct: 460 NLQELNLRYNKLEALPKEI------GKLKNLQK--------------------------- 486

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L+L+   L  +P EI +   + KL+L  N ++ LP ++    +L+ L L  N++K  
Sbjct: 487 ---LNLQYNQLKTLPKEIGKLKNLQKLNLQYNQLKTLPKDIGKLKNLRELDLRNNQLKTL 543

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P  I   L +L  L L  N L  +P +  K +  L+IL LS+N + +LP+      L +L
Sbjct: 544 PKEI-GKLQNLQELNLRYNKLETLPKEIGK-LRNLKILYLSHNQLQALPK--EIEKLVNL 599

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           ++LYL   QL+  P +I +LQ L+ LDL  N L+++P+    L SL  L L +  + +LP
Sbjct: 600 RKLYLSGNQLQALPKEIGKLQNLQGLDLGNNPLKTLPKDIGKLKSLQTLCLDNKQLESLP 659

Query: 377 PELG 380
            E+G
Sbjct: 660 IEIG 663



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 195/375 (52%), Gaps = 27/375 (7%)

Query: 46  SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 105
           S++  LDL  N++ ++P  I    +L E  + +N L ALP ++G+L  L  L L  N+L+
Sbjct: 45  SKVFVLDLSSNKLKTLPKEIGKLKNLQELDLSHNQLQALPEDIGQLQNLRELYLSDNKLE 104

Query: 106 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164
               +   L+ L  L L NN L  LP EIGK+  L++L L+ N L  L   + N     +
Sbjct: 105 ALPEDIGNLKNLRTLHLYNNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQI 164

Query: 165 LKYLRSR---LPEN------------EDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
           L   R++   LPE              D++     ED+  +   L +    L L    L 
Sbjct: 165 LDLSRNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKN-LQI----LDLSRNKLE 219

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
           A+P EI +   + KLDLS N ++ LP E+    +LQ L L  N+++  P+ I   L +L 
Sbjct: 220 ALPKEIGKLRNLPKLDLSHNQLETLPEEIGQLQNLQILDLRYNQLETLPEEI-GQLQNLR 278

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
            L L NN L+ +P +  K +  L+ L+LS N + +LPE     +L +L+ L L+   L+ 
Sbjct: 279 ELHLYNNKLKALPKEIGK-LKNLRTLNLSTNKLEALPE--EIGNLKNLRTLNLQYNPLKT 335

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
            P +I +LQ L  LDLS N L+++P+    L +L +LDLS N + ALP E+G L+ +L+ 
Sbjct: 336 LPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQALPKEIGQLQ-NLRE 394

Query: 389 LRLDGNPLRSIRRTI 403
           L L  N L ++   I
Sbjct: 395 LHLYNNQLETLPEEI 409



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 71/140 (50%), Gaps = 2/140 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+L  L    I     L EL    N L  +P+ IG L  L  L L  N++ +
Sbjct: 530 LRELDLRNNQLKTLPKE-IGKLQNLQELNLRYNKLETLPKEIGKLRNLKILYLSHNQLQA 588

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L + Y+  N L ALP E+GKL  L  LDL +N LK    +  +L+ L  L
Sbjct: 589 LPKEIEKLVNLRKLYLSGNQLQALPKEIGKLQNLQGLDLGNNPLKTLPKDIGKLKSLQTL 648

Query: 120 DLSNNSLSGLPPEIGKMTTL 139
            L N  L  LP EIGK+  L
Sbjct: 649 CLDNKQLESLPIEIGKLGEL 668


>gi|255070553|ref|XP_002507358.1| predicted protein [Micromonas sp. RCC299]
 gi|226522633|gb|ACO68616.1| predicted protein [Micromonas sp. RCC299]
          Length = 574

 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 143/398 (35%), Positives = 211/398 (53%), Gaps = 21/398 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+LT +    I   T LTEL    N L  +P  IG L+ L  LDL  N++ S+P+
Sbjct: 34  LDLYNNQLTSVPAE-IGQLTSLTELYLFGNQLTSVPAEIGQLTSLTGLDLSGNQLTSVPA 92

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            +    SL E ++ NN L+++PAE+G+L+ L  L L  N+L     E  QL  L  L L 
Sbjct: 93  EVGQLTSLRELHLWNNRLTSVPAEIGQLTSLEELCLDDNRLTSVPAEIGQLTSLERLYLG 152

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ +P EIG++T+L +L L  N L ++         PA +  L S    N +    T
Sbjct: 153 GNQLTSVPAEIGRLTSLEELNLKSNQLTSV---------PAEIGQLASLEKLNLNGNQLT 203

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
           +    I   T L    KEL L G  L+++P++I +  ++ +L L  N +  +P E+   A
Sbjct: 204 SVPAEIGQLTSL----KELDLNGNQLTSVPADIGQLTDLKELGLRDNQLTSVPAEIGQLA 259

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           SL+ L +  N++   P A +  L+SL  L+LD+N L  VP++ ++ +  L++L L  N +
Sbjct: 260 SLEKLYVGGNQLTSVP-AEIGQLTSLEGLELDDNQLTSVPAEIWQ-LTSLRVLYLDDNQL 317

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
            S+P       L  L ELYL   QL   P +I RL +L+ L L  N L S+PE    LTS
Sbjct: 318 TSVP--AEIGQLTSLTELYLSGNQLTSVPAEIGRLTELKELGLRDNQLTSVPEEIWQLTS 375

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L  L L DN +  LP E+G L  SL+ L L+ N L S+
Sbjct: 376 LRVLYLDDNLLDELPAEIGQL-TSLEELGLERNELTSV 412



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 137/404 (33%), Positives = 202/404 (50%), Gaps = 42/404 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL++ GN+LT +    I   T L EL  + N L  +P  IG L+ L  L L  N++ S
Sbjct: 192 LEKLNLNGNQLTSVPAE-IGQLTSLKELDLNGNQLTSVPADIGQLTDLKELGLRDNQLTS 250

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I    SL + Y+G N L+++PAE+G+L+ L  L+L  NQL     E  QL  L VL
Sbjct: 251 VPAEIGQLASLEKLYVGGNQLTSVPAEIGQLTSLEGLELDDNQLTSVPAEIWQLTSLRVL 310

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +N L+ +P EIG++T+L +L L+GN L ++ + +              RL E     
Sbjct: 311 YLDDNQLTSVPAEIGQLTSLTELYLSGNQLTSVPAEI-------------GRLTE----- 352

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              KEL L    L+++P EIW+   +  L L  N + ELP E+ 
Sbjct: 353 ------------------LKELGLRDNQLTSVPEEIWQLTSLRVLYLDDNLLDELPAEIG 394

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              SL+ L L RN++   P  I   L+SL+ L L  N L  VP++  +   + ++     
Sbjct: 395 QLTSLEELGLERNELTSVPAEIW-QLTSLTELYLGCNQLTSVPAEIGQLTSLTKLYLSGT 453

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            + S+P       L  L+ LYL   QL   P +I +L  LR L L+   L S+P     L
Sbjct: 454 KLTSVP--AEIGQLTSLRVLYLYGNQLTSLPAEIGQLASLRELYLNGKQLTSVPAEIGQL 511

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           T L ELDL DN ++++P E+  L  SL+ L LD N L S+   I
Sbjct: 512 TELKELDLRDNKLTSVPEEIWQL-TSLRVLYLDDNQLTSVPAAI 554



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 144/413 (34%), Positives = 216/413 (52%), Gaps = 22/413 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+ GN+LT +    +   T L EL    N L  +P  IG L+ L  L L  NR+ S
Sbjct: 77  LTGLDLSGNQLTSVPAE-VGQLTSLRELHLWNNRLTSVPAEIGQLTSLEELCLDDNRLTS 135

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I    SL   Y+G N L+++PAE+G+L+ L  L+L SNQL     E  QL  L  L
Sbjct: 136 VPAEIGQLTSLERLYLGGNQLTSVPAEIGRLTSLEELNLKSNQLTSVPAEIGQLASLEKL 195

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENE 176
           +L+ N L+ +P EIG++T+L++L L GN L ++ +    L +     L     + +P   
Sbjct: 196 NLNGNQLTSVPAEIGQLTSLKELDLNGNQLTSVPADIGQLTDLKELGLRDNQLTSVPAEI 255

Query: 177 DSEASTTKEDLITMATRLSVTSKEL----SLEGM-----NLSAIPSEIWEAGEITKLDLS 227
              AS   E L     +L+    E+    SLEG+      L+++P+EIW+   +  L L 
Sbjct: 256 GQLASL--EKLYVGGNQLTSVPAEIGQLTSLEGLELDDNQLTSVPAEIWQLTSLRVLYLD 313

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            N +  +P E+    SL  L LS N++   P A +  L+ L  L L +N L  VP + ++
Sbjct: 314 DNQLTSVPAEIGQLTSLTELYLSGNQLTSVP-AEIGRLTELKELGLRDNQLTSVPEEIWQ 372

Query: 288 DIPMLQILDLSYNIASLPENPP-FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
            +  L++L L  N+  L E P     L  L+EL L R +L   P +I +L  L  L L  
Sbjct: 373 -LTSLRVLYLDDNL--LDELPAEIGQLTSLEELGLERNELTSVPAEIWQLTSLTELYLGC 429

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           N L S+P     LTSLT+L LS   ++++P E+G L  SL+ L L GN L S+
Sbjct: 430 NQLTSVPAEIGQLTSLTKLYLSGTKLTSVPAEIGQL-TSLRVLYLYGNQLTSL 481



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 125/358 (34%), Positives = 186/358 (51%), Gaps = 22/358 (6%)

Query: 46  SRLIRLDL--HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 103
            R++RL+L    N + S+P+ I    SL    + NN L+++PAE+G+L+ L  L L  NQ
Sbjct: 4   GRVVRLELALDGNELTSVPAEIGQLTSLEVLDLYNNQLTSVPAEIGQLTSLTELYLFGNQ 63

Query: 104 LKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 162
           L     E  QL  L+ LDLS N L+ +P E+G++T+LR+L L  N L ++         P
Sbjct: 64  LTSVPAEIGQLTSLTGLDLSGNQLTSVPAEVGQLTSLRELHLWNNRLTSV---------P 114

Query: 163 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 222
           A +  L S      D    T+    I   T L    + L L G  L+++P+EI     + 
Sbjct: 115 AEIGQLTSLEELCLDDNRLTSVPAEIGQLTSL----ERLYLGGNQLTSVPAEIGRLTSLE 170

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           +L+L  N +  +P E+   ASL+ L L+ N++   P A +  L+SL  L L+ N L  VP
Sbjct: 171 ELNLKSNQLTSVPAEIGQLASLEKLNLNGNQLTSVP-AEIGQLTSLKELDLNGNQLTSVP 229

Query: 283 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           +D    +  L+ L L  N + S+P       L  L++LY+   QL   P +I +L  L  
Sbjct: 230 AD-IGQLTDLKELGLRDNQLTSVP--AEIGQLASLEKLYVGGNQLTSVPAEIGQLTSLEG 286

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L+L  N L S+P     LTSL  L L DN ++++P E+G L  SL  L L GN L S+
Sbjct: 287 LELDDNQLTSVPAEIWQLTSLRVLYLDDNQLTSVPAEIGQL-TSLTELYLSGNQLTSV 343



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 1/119 (0%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   T LT+L  S   L  +P  IG L+ L  L L+ N++ S+P+ I    SL E Y+  
Sbjct: 439 IGQLTSLTKLYLSGTKLTSVPAEIGQLTSLRVLYLYGNQLTSLPAEIGQLASLRELYLNG 498

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 136
             L+++PAE+G+L++L  LDL  N+L     E  QL  L VL L +N L+ +P  I ++
Sbjct: 499 KQLTSVPAEIGQLTELKELDLRDNKLTSVPEEIWQLTSLRVLYLDDNQLTSVPAAIREL 557


>gi|449268295|gb|EMC79165.1| Leucine-rich repeat-containing protein 40 [Columba livia]
          Length = 559

 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 146/436 (33%), Positives = 227/436 (52%), Gaps = 49/436 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++ GNKL  L  + I++   L +L  SKN L  +P  I +++ L +L L +N++ S
Sbjct: 156 LVRLNLAGNKLESLPAD-ISAMKSLRQLDCSKNYLETVPSKIATMASLEQLYLRKNKLRS 214

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 118
           +P   S C  L E + G N +  L AE L +L+ L  L+L  N++K    E   L +L  
Sbjct: 215 LPE-FSSCKLLKELHAGENQIETLNAENLKQLNSLSVLELRDNKIKSVPDEITLLQKLER 273

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LDL+NN +S LP  +G ++ L+ L L GNPLRT+R  L+   T  LLKYLRS++ +    
Sbjct: 274 LDLANNDISRLPYTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSKIQD---- 329

Query: 179 EASTTKEDLITMAT--------RLSVTS-KELSLEGMNLSAIPSEIWEAGE---ITKLDL 226
           E S T E  +T  T          ++TS K L       + IP E+++A     +   + 
Sbjct: 330 EPSPTGEPPVTAMTLPSESRVNMHAITSLKLLEYSEKQAAVIPDEMFDAVRSHPVATANF 389

Query: 227 SRNSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           S+N + E+PP +     S+  + L  N+I       L  L  L+ L + NN L  +P + 
Sbjct: 390 SKNQLSEVPPRIVELKDSVCDVNLGFNRISSI-SLELCVLHKLTHLDIRNNFLTSLPEE- 447

Query: 286 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
            + +  LQI++LS+N                        + +  P+ + R+  L  + LS
Sbjct: 448 MEALARLQIINLSFN------------------------RFKVFPSVLYRMGALETILLS 483

Query: 346 QNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
            N + SI P   KN+  L  LDL +N++  +PPELG  E +L+ L L+GNP R+ R  IL
Sbjct: 484 NNQVGSIDPLQLKNMDKLGTLDLQNNDLLQVPPELGNCE-TLRTLLLEGNPFRTPRAAIL 542

Query: 405 DRGTKAVLKYLKDKIP 420
            +GT AVL+YL+ +IP
Sbjct: 543 AKGTAAVLEYLRSRIP 558



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 168/351 (47%), Gaps = 66/351 (18%)

Query: 71  LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 129
           L +  + +N L +L  ++  L+ L  LD+H NQL        QL  L  LD+S+N L  +
Sbjct: 41  LTKLILASNKLQSLSEDVKLLAALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLRSI 100

Query: 130 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 189
           P E+ ++  L+ LLL  N L  L         PA    L                     
Sbjct: 101 PEELTQLPHLKSLLLHHNELTHL---------PAGFGQL--------------------- 130

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
                 V  +EL L   +L+ IP+       + +L+L+ N ++ LP ++S+  SL+ L  
Sbjct: 131 ------VNLEELDLSNNHLTDIPTSFALLINLVRLNLAGNKLESLPADISAMKSLRQLDC 184

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP 309
           S+N ++  P  I T ++SL  L L  N LR                       SLPE   
Sbjct: 185 SKNYLETVPSKIAT-MASLEQLYLRKNKLR-----------------------SLPE--- 217

Query: 310 FSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 368
           FSS   L+EL+    Q+     + L+ L  L +L+L  N ++S+P+    L  L  LDL+
Sbjct: 218 FSSCKLLKELHAGENQIETLNAENLKQLNSLSVLELRDNKIKSVPDEITLLQKLERLDLA 277

Query: 369 DNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           +N+IS LP  LG L   L+ L L+GNPLR+IRR +L +GT+ +LKYL+ KI
Sbjct: 278 NNDISRLPYTLGNLS-QLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSKI 327



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 190/424 (44%), Gaps = 84/424 (19%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI + N L  + E +  L+ L  LD+H N++ S+PS++    +L +  + +N
Sbjct: 36  WEQTDLTKLILASNKLQSLSEDVKLLAALTVLDVHDNQLTSLPSALGQLENLQKLDVSHN 95

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 138
            L ++P EL +L  L +L LH N+L        QL  L  LDLSNN L+ +P     +  
Sbjct: 96  KLRSIPEELTQLPHLKSLLLHHNELTHLPAGFGQLVNLEELDLSNNHLTDIPTSFALLIN 155

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L +L L GN L +L         PA +  ++S                            
Sbjct: 156 LVRLNLAGNKLESL---------PADISAMKSL--------------------------- 179

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L      L  +PS+I     + +L L +N ++ L PE SSC  L+ L    N+I+   
Sbjct: 180 RQLDCSKNYLETVPSKIATMASLEQLYLRKNKLRSL-PEFSSCKLLKELHAGENQIETLN 238

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP------------ 305
              L  L+SLS L+L +N ++ VP D    +  L+ LDL+ N I+ LP            
Sbjct: 239 AENLKQLNSLSVLELRDNKIKSVP-DEITLLQKLERLDLANNDISRLPYTLGNLSQLKFL 297

Query: 306 --ENPPFSSLPH------LQEL--YLR-RMQLREAPT----------------DILRLQQ 338
             E  P  ++         QEL  YLR ++Q   +PT                ++  +  
Sbjct: 298 ALEGNPLRTIRRDLLQKGTQELLKYLRSKIQDEPSPTGEPPVTAMTLPSESRVNMHAITS 357

Query: 339 LRILDLSQNSLQSIP-EGFKNLTS--LTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L++L+ S+     IP E F  + S  +   + S N +S +PP +  L+ S+  + L  N 
Sbjct: 358 LKLLEYSEKQAAVIPDEMFDAVRSHPVATANFSKNQLSEVPPRIVELKDSVCDVNLGFNR 417

Query: 396 LRSI 399
           + SI
Sbjct: 418 ISSI 421


>gi|421099978|ref|ZP_15560620.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796959|gb|EKR99076.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 580

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 143/418 (34%), Positives = 214/418 (51%), Gaps = 23/418 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL ++ N+L  L    I     L EL  + N L  +P+ IG L  L  LDL  N++ +
Sbjct: 107 LQKLYLDNNQLKTLPKE-IGKLQNLQELYLTNNQLKTLPKEIGYLKELQDLDLRDNQLTT 165

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L +  +  N L  LP E+GKL  L  LDL+ NQLK    E   L+ L  L
Sbjct: 166 LPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLRELDLNDNQLKTLPKEIGYLKELQDL 225

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSRLPENEDS 178
           DL +N L+ LP EIGK+  L+KL L+GN L+TL   +  G    L + YL     +    
Sbjct: 226 DLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEI--GKLQNLQELYLYGNQLKTLPK 283

Query: 179 EASTTKEDLITMAT--RLSVTSKE----------LSLEGMNLSAIPSEIWEAGEITKLDL 226
           E    KE  +   +  +L+   KE          L L    L  +P +I    E+  LDL
Sbjct: 284 EIGYLKELQVLHLSDNKLTTLPKEIGQLQKLQALLHLGDNQLKTLPKDIGYLKELQLLDL 343

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S N ++ LP ++     LQ L L  N++K  P  I   L +L  L L NN L+ +P D  
Sbjct: 344 SGNQLKTLPKDIGQLQKLQDLELDSNQLKTLPKDI-GKLQNLQVLNLSNNQLKTLPKD-I 401

Query: 287 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
             +  L++L+L  N + +LP+      L  LQEL L   +L   P DI +LQ L++L+L+
Sbjct: 402 GQLQKLRVLELYNNQLKTLPK--EIGQLQKLQELNLSHNKLTTLPKDIEKLQNLQVLNLT 459

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            N L+++P+    L +L  L+LS N ++ LP ++G L+ +LQ L L  N L ++ + I
Sbjct: 460 NNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQ-NLQELYLTNNQLTTLPKDI 516



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 142/410 (34%), Positives = 207/410 (50%), Gaps = 31/410 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM--PETIGSLSRLIRLDLHQNRI 58
           + KL++  N+LT +    I     L EL  S+N L  +  P  IG L +L    L  N++
Sbjct: 62  LQKLNLYNNQLTTIPKE-IGYLKELQELNLSRNQLTTLTLPNKIGQLQKLY---LDNNQL 117

Query: 59  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 117
            ++P  I    +L E Y+ NN L  LP E+G L +L  LDL  NQL     E  +L+ L 
Sbjct: 118 KTLPKEIGKLQNLQELYLTNNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQ 177

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            LDLS N L  LP EIGK+  LR+L L  N L+TL         P  + YL+      E 
Sbjct: 178 KLDLSGNQLKTLPKEIGKLQNLRELDLNDNQLKTL---------PKEIGYLK------EL 222

Query: 178 SEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
            +       L T+   +      ++L L G  L  +P EI +   + +L L  N ++ LP
Sbjct: 223 QDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLQELYLYGNQLKTLP 282

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKDIPMLQI 294
            E+     LQ L LS NK+   P  I       + L L +N L+ +P D G+  +  LQ+
Sbjct: 283 KEIGYLKELQVLHLSDNKLTTLPKEIGQLQKLQALLHLGDNQLKTLPKDIGY--LKELQL 340

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           LDLS N + +LP++     L  LQ+L L   QL+  P DI +LQ L++L+LS N L+++P
Sbjct: 341 LDLSGNQLKTLPKD--IGQLQKLQDLELDSNQLKTLPKDIGKLQNLQVLNLSNNQLKTLP 398

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           +    L  L  L+L +N +  LP E+G L+  LQ L L  N L ++ + I
Sbjct: 399 KDIGQLQKLRVLELYNNQLKTLPKEIGQLQ-KLQELNLSHNKLTTLPKDI 447



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 139/408 (34%), Positives = 213/408 (52%), Gaps = 25/408 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+ GN+L  L    I     L EL  + N L  +P+ IG L  L  LDL  N++ +
Sbjct: 176 LQKLDLSGNQLKTLPKE-IGKLQNLRELDLNDNQLKTLPKEIGYLKELQDLDLRDNQLTT 234

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L +  +  N L  LP E+GKL  L  L L+ NQLK    E   L+ L VL
Sbjct: 235 LPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLQELYLYGNQLKTLPKEIGYLKELQVL 294

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTG-NPLRTLRSSLVNGPTPALLKYLRS-RLPENED 177
            LS+N L+ LP EIG++  L+ LL  G N L+TL         P  + YL+  +L +   
Sbjct: 295 HLSDNKLTTLPKEIGQLQKLQALLHLGDNQLKTL---------PKDIGYLKELQLLDLSG 345

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
           ++  T  +D I    +L    ++L L+   L  +P +I +   +  L+LS N ++ LP +
Sbjct: 346 NQLKTLPKD-IGQLQKL----QDLELDSNQLKTLPKDIGKLQNLQVLNLSNNQLKTLPKD 400

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           +     L+ L L  N++K  P  I   L  L  L L +N L  +P D  + +  LQ+L+L
Sbjct: 401 IGQLQKLRVLELYNNQLKTLPKEI-GQLQKLQELNLSHNKLTTLPKD-IEKLQNLQVLNL 458

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
           + N + +LP+      L +LQ L L   +L   P DI +LQ L+ L L+ N L ++P+  
Sbjct: 459 TNNQLKTLPK--EIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTLPKDI 516

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP-LRSIRRTI 403
           + L +L EL L++N ++ LP E+  L+  L+ L LD  P LRS  + I
Sbjct: 517 EKLQNLQELYLTNNQLTTLPKEIRYLK-GLEVLHLDDIPALRSQEKKI 563



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 119/355 (33%), Positives = 181/355 (50%), Gaps = 43/355 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL+ N++ ++P  I    +L +  + NN L+ +P E+G L +L  L+L  NQL    + 
Sbjct: 42  LDLNNNQLTTLPKDIGKLQNLQKLNLYNNQLTTIPKEIGYLKELQELNLSRNQLTTLTLP 101

Query: 111 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 170
               +L  L L NN L  LP EIGK+  L++L LT N L+TL         P  + YL+ 
Sbjct: 102 NKIGQLQKLYLDNNQLKTLPKEIGKLQNLQELYLTNNQLKTL---------PKEIGYLKE 152

Query: 171 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
                                       ++L L    L+ +P+EI +   + KLDLS N 
Sbjct: 153 ---------------------------LQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQ 185

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           ++ LP E+    +L+ L L+ N++K  P  I   L  L  L L +N L  +P++  K + 
Sbjct: 186 LKTLPKEIGKLQNLRELDLNDNQLKTLPKEI-GYLKELQDLDLRDNQLTTLPNEIGK-LQ 243

Query: 291 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
            LQ LDLS N + +LP+      L +LQELYL   QL+  P +I  L++L++L LS N L
Sbjct: 244 NLQKLDLSGNQLKTLPK--EIGKLQNLQELYLYGNQLKTLPKEIGYLKELQVLHLSDNKL 301

Query: 350 QSIPEGFKNLTSLTE-LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            ++P+    L  L   L L DN +  LP ++G L+  LQ L L GN L+++ + I
Sbjct: 302 TTLPKEIGQLQKLQALLHLGDNQLKTLPKDIGYLK-ELQLLDLSGNQLKTLPKDI 355



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 120/225 (53%), Gaps = 12/225 (5%)

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
           +E + T  +L T A +     + L L    L+ +P +I +   + KL+L  N +  +P E
Sbjct: 20  AEETKTHRNL-TEALQNPTDVRYLDLNNNQLTTLPKDIGKLQNLQKLNLYNNQLTTIPKE 78

Query: 238 LSSCASLQTLILSRNKIKDW--PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
           +     LQ L LSRN++     P+ I      L  L LDNN L+ +P +  K +  LQ L
Sbjct: 79  IGYLKELQELNLSRNQLTTLTLPNKI----GQLQKLYLDNNQLKTLPKEIGK-LQNLQEL 133

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L+ N + +LP+      L  LQ+L LR  QL   P +I +LQ L+ LDLS N L+++P+
Sbjct: 134 YLTNNQLKTLPK--EIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPK 191

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
               L +L ELDL+DN +  LP E+G L+  LQ L L  N L ++
Sbjct: 192 EIGKLQNLRELDLNDNQLKTLPKEIGYLK-ELQDLDLRDNQLTTL 235


>gi|255084227|ref|XP_002508688.1| predicted protein [Micromonas sp. RCC299]
 gi|226523965|gb|ACO69946.1| predicted protein [Micromonas sp. RCC299]
          Length = 518

 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 139/382 (36%), Positives = 200/382 (52%), Gaps = 25/382 (6%)

Query: 21  SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 80
           SW    EL    N L  +P  IG L+ L+ L+L  N++  +P+ I    SL E  +GNN 
Sbjct: 111 SW----ELNLGNNRLTSLPAEIGQLTSLVELNLEHNKLTELPAEIGQLASLVELNLGNNR 166

Query: 81  LSALPAELGKLSKLGTLDLHSNQ-LKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 138
           L++LPAE+G+L+ L  L+L  N  L E   E  QL  L  L+L NN L+ LP EIG++T+
Sbjct: 167 LTSLPAEIGQLTSLVELNLDDNTPLTELPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTS 226

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L++L L  N L +L         PA +  L S +  N      T+    I   T L    
Sbjct: 227 LKRLFLHRNQLTSL---------PAEIGQLASLVELNLHRNQLTSVPAEIGQLTSL---- 273

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           K L L    L+++P+EI +   + KLDL+ N +  LP E+    SL+ L LS N+++  P
Sbjct: 274 KRLFLHRNQLTSLPAEIGQLTSLVKLDLTTNKLTSLPAEIGQLESLRELRLSGNQLRSVP 333

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
             I   L+SL+ L L NN L  +P++    +  L  L+L  N + S+P       L  L+
Sbjct: 334 AEI-GQLTSLTLLDLGNNQLTSMPAE-IGQLTSLVELNLGGNHLTSMPAE--IGQLASLK 389

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L+L R QL   P +I +L  L +L L  N L S+P     LTSL  L L  N ++++P 
Sbjct: 390 RLFLHRNQLTSMPAEIGQLTSLEMLHLGGNQLMSVPAEAGQLTSLKRLLLDRNQLTSVPA 449

Query: 378 ELGLLEPSLQALRLDGNPLRSI 399
           E+G L  SL+ L L GN L S+
Sbjct: 450 EIGQL-TSLEMLHLGGNQLTSV 470



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 171/359 (47%), Gaps = 63/359 (17%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   T L EL    N L  +P  IG L+ L RL LH+N++ S+P+ I    SL E  +  
Sbjct: 198 IGQLTSLRELNLCNNRLTSLPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLASLVELNLHR 257

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+++PAE+G+L+ L  L LH NQL     E  QL  L  LDL+ N L+ LP EIG++ 
Sbjct: 258 NQLTSVPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLTSLVKLDLTTNKLTSLPAEIGQLE 317

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +LR+L L+GN LR++         PA +  L S                 +T+       
Sbjct: 318 SLRELRLSGNQLRSV---------PAEIGQLTS-----------------LTL------- 344

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L L    L+++P+EI +   + +L+L  N +  +P E+   ASL+ L L RN++   
Sbjct: 345 ---LDLGNNQLTSMPAEIGQLTSLVELNLGGNHLTSMPAEIGQLASLKRLFLHRNQLTSM 401

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P  I   L+SL  L L  N L  VP++  +                         L  L+
Sbjct: 402 PAEI-GQLTSLEMLHLGGNQLMSVPAEAGQ-------------------------LTSLK 435

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
            L L R QL   P +I +L  L +L L  N L S+P     LTSL  L L  N +++LP
Sbjct: 436 RLLLDRNQLTSVPAEIGQLTSLEMLHLGGNQLTSVPAEIGQLTSLWTLHLGGNQLTSLP 494



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 145/406 (35%), Positives = 208/406 (51%), Gaps = 25/406 (6%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N+LT L    I   T L EL    N L  +P  IG L+ L  L L  + + S+P+ I   
Sbjct: 6   NQLTSLPAE-IGQLTSLKELRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPAEIGQL 64

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSG 128
            SL E  +  N L++LPAE+G+L+ L  LDL +  L+E      +L    L+L NN L+ 
Sbjct: 65  ASLVELDLSYNQLTSLPAEIGQLTSLVKLDL-TTWLEEPPSLLEELDSWELNLGNNRLTS 123

Query: 129 LPPEIGKMTTLRKLLLTGNPLRTL------RSSLVN--------GPTPALLKYLRSRLPE 174
           LP EIG++T+L +L L  N L  L       +SLV            PA +  L S +  
Sbjct: 124 LPAEIGQLTSLVELNLEHNKLTELPAEIGQLASLVELNLGNNRLTSLPAEIGQLTSLVEL 183

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
           N D     T  +L     +L+ + +EL+L    L+++P+EI +   + +L L RN +  L
Sbjct: 184 NLDDNTPLT--ELPAEIGQLT-SLRELNLCNNRLTSLPAEIGQLTSLKRLFLHRNQLTSL 240

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P E+   ASL  L L RN++   P  I   L+SL  L L  N L  +P++    +  L  
Sbjct: 241 PAEIGQLASLVELNLHRNQLTSVPAEI-GQLTSLKRLFLHRNQLTSLPAE-IGQLTSLVK 298

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           LDL+ N + SLP       L  L+EL L   QLR  P +I +L  L +LDL  N L S+P
Sbjct: 299 LDLTTNKLTSLPAE--IGQLESLRELRLSGNQLRSVPAEIGQLTSLTLLDLGNNQLTSMP 356

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
                LTSL EL+L  N+++++P E+G L  SL+ L L  N L S+
Sbjct: 357 AEIGQLTSLVELNLGGNHLTSMPAEIGQL-ASLKRLFLHRNQLTSM 401



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 167/360 (46%), Gaps = 64/360 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  N+LT L    I   T L  L   +N L  +P  IG L+ L+ L+LH+N++ S
Sbjct: 204 LRELNLCNNRLTSLPAE-IGQLTSLKRLFLHRNQLTSLPAEIGQLASLVELNLHRNQLTS 262

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    SL   ++  N L++LPAE+G+L+ L  LDL +N+L     E  QL  L  L
Sbjct: 263 VPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLTSLVKLDLTTNKLTSLPAEIGQLESLREL 322

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LS N L  +P EIG++T+L  L L  N L ++         PA +  L S +       
Sbjct: 323 RLSGNQLRSVPAEIGQLTSLTLLDLGNNQLTSM---------PAEIGQLTSLV------- 366

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                               EL+L G +L+++P+EI +   + +L L RN +  +P E+ 
Sbjct: 367 --------------------ELNLGGNHLTSMPAEIGQLASLKRLFLHRNQLTSMPAEIG 406

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              SL+ L L  N++   P A    L+SL  L LD N L  VP++               
Sbjct: 407 QLTSLEMLHLGGNQLMSVP-AEAGQLTSLKRLLLDRNQLTSVPAE--------------- 450

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                        L  L+ L+L   QL   P +I +L  L  L L  N L S+P   ++L
Sbjct: 451 ----------IGQLTSLEMLHLGGNQLTSVPAEIGQLTSLWTLHLGGNQLTSLPAAIRDL 500


>gi|198426338|ref|XP_002124802.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 598

 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 140/453 (30%), Positives = 228/453 (50%), Gaps = 65/453 (14%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           KLD+  N++T L  + I     L +  AS N LN +P  IG L  L  LD   N+I  +P
Sbjct: 174 KLDISHNQITTLPED-ICGIKFLKDFNASFNQLNALPNNIGKLQSLRILDASNNKIKCLP 232

Query: 63  SSIS----------------------GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 100
            SIS                       C  L E  +GNN L+  P++L     +  L+L 
Sbjct: 233 DSISTLKQLEILSFRNNLLDQLPSLTSCVCLKELSLGNNRLTCFPSQLP--VSVTILELR 290

Query: 101 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 159
            N+L E  +   +L +L   D++NN++  LPPE+G M +++ ++++GNP+RT+ S ++N 
Sbjct: 291 DNKLSEIPLSVTELTQLERFDIANNNVPNLPPEVGAMESIKVVVVSGNPIRTISSHILNK 350

Query: 160 PTPALLKYLRSRLPENEDSEASTTKEDLITMAT--------RLSVTSKELSLEGMNLSAI 211
            T ALLK+LRSR+  NE    + +   +I  +          L  +S++L L   N  ++
Sbjct: 351 GTQALLKHLRSRIVSNETESLNASTGSVIPQSNSNNDLSNKHLVASSRKLDLTKENPESV 410

Query: 212 PSEIWEAGE--ITKLDLSRNSIQELPPELSSC-ASLQTLILSRNKIKDWPDAILTSLSSL 268
            +++    E  + ++ L+R S+  +P ELS    SL TL +S NK+K  P  ++   S L
Sbjct: 411 TTKLALYSELPVNEVILARCSLTNIPEELSGYKGSLSTLNMSNNKLKCLP-PMIGCFSQL 469

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 328
             L L  N +  +P D   +   L+ +++SYN+        F+ L               
Sbjct: 470 GHLDLSGNAMSALP-DELGECISLREINMSYNL--------FTVL--------------- 505

Query: 329 APTDILRLQQLRILDLSQNSLQSIP-EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
            P  I +L+ L +L    N +  I     K L  L+ L L +N+I+ +PPELGL   S+ 
Sbjct: 506 -PGSIFKLKNLEVLVADNNQMTKIDVPNLKLLQQLSTLSLQNNSINEVPPELGLFT-SIT 563

Query: 388 ALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           AL+L+GN  R  R+ +L +GT A+++YL+ ++P
Sbjct: 564 ALKLEGNLFRVPRQNVLQKGTLALMEYLRSRLP 596



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 190/410 (46%), Gaps = 32/410 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++KL++  N L  L  +L  S+  L  L    N L  +P  IG+LS L  L+L  N++  
Sbjct: 80  LTKLNLSSNLLCSLPEDL-QSFEFLKFLDVHDNKLQALPNAIGNLSALEHLNLSHNQLSI 138

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           I +S +G  +L    + +N L  LP+ LG+L     LD+  NQ+     + C ++ L   
Sbjct: 139 IQTSFNGLVNLRVLLLQHNRLRELPSSLGRLQNCEKLDISHNQITTLPEDICGIKFLKDF 198

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY---LRSRLPENE 176
           + S N L+ LP  IGK+ +LR L  + N ++ L  S+       +L +   L  +LP   
Sbjct: 199 NASFNQLNALPNNIGKLQSLRILDASNNKIKCLPDSISTLKQLEILSFRNNLLDQLPSLT 258

Query: 177 D----SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
                 E S     L    ++L V+   L L    LS IP  + E  ++ + D++ N++ 
Sbjct: 259 SCVCLKELSLGNNRLTCFPSQLPVSVTILELRDNKLSEIPLSVTELTQLERFDIANNNVP 318

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAIL------------TSLSSLSCLKLDNNPLRQ 280
            LPPE+ +  S++ +++S N I+     IL            + + S     L+ +    
Sbjct: 319 NLPPEVGAMESIKVVVVSGNPIRTISSHILNKGTQALLKHLRSRIVSNETESLNASTGSV 378

Query: 281 VP-SDGFKDIPMLQILDLSYNIASLPENPP--------FSSLPHLQELYLRRMQLREAPT 331
           +P S+   D+    ++  S  +    ENP         +S LP + E+ L R  L   P 
Sbjct: 379 IPQSNSNNDLSNKHLVASSRKLDLTKENPESVTTKLALYSELP-VNEVILARCSLTNIPE 437

Query: 332 DILRLQ-QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           ++   +  L  L++S N L+ +P      + L  LDLS N +SALP ELG
Sbjct: 438 ELSGYKGSLSTLNMSNNKLKCLPPMIGCFSQLGHLDLSGNAMSALPDELG 487



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 178/368 (48%), Gaps = 42/368 (11%)

Query: 77  GNNALSALPAELGKLSKLGTLDLHSNQL-----------KEYCVEAC-----------QL 114
           G N  S   A+L +  K GTL+L +NQ            K    EA            Q+
Sbjct: 19  GQNIPSVSDAKLNQARKSGTLNLSNNQWDVLPSNVWSLNKAPTKEAASFDDGNSAWWDQV 78

Query: 115 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
            L+ L+LS+N L  LP ++     L+ L +  N L+ L +++ N    + L++L   L  
Sbjct: 79  ELTKLNLSSNLLCSLPEDLQSFEFLKFLDVHDNKLQALPNAIGN---LSALEHLN--LSH 133

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
           N+ S   T+   L+ +        + L L+   L  +PS +       KLD+S N I  L
Sbjct: 134 NQLSIIQTSFNGLVNL--------RVLLLQHNRLRELPSSLGRLQNCEKLDISHNQITTL 185

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P ++     L+    S N++   P+ I   L SL  L   NN ++ +P D    +  L+I
Sbjct: 186 PEDICGIKFLKDFNASFNQLNALPNNI-GKLQSLRILDASNNKIKCLP-DSISTLKQLEI 243

Query: 295 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           L    N+  L + P  +S   L+EL L   +L   P+ +     + IL+L  N L  IP 
Sbjct: 244 LSFRNNL--LDQLPSLTSCVCLKELSLGNNRLTCFPSQLPV--SVTILELRDNKLSEIPL 299

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
               LT L   D+++NN+  LPPE+G +E S++ + + GNP+R+I   IL++GT+A+LK+
Sbjct: 300 SVTELTQLERFDIANNNVPNLPPEVGAME-SIKVVVVSGNPIRTISSHILNKGTQALLKH 358

Query: 415 LKDKIPEN 422
           L+ +I  N
Sbjct: 359 LRSRIVSN 366


>gi|189241927|ref|XP_968016.2| PREDICTED: similar to mitotic protein phosphatase 1 regulator,
           putative [Tribolium castaneum]
          Length = 594

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 141/434 (32%), Positives = 228/434 (52%), Gaps = 45/434 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++++++  NKL  L  + I +   L +L  + N L  +P+ +G L++L  L    N I  
Sbjct: 193 LTEINLSHNKLIELPPD-IVNLRGLLKLDVTHNDLVYLPK-MGELAKLQFLYAQHNNIEE 250

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQLR-LSV 118
           IP    GC  L + Y GNN +  +  +  + +S L  LDL  N++++   E   L+ L  
Sbjct: 251 IPD-FEGCTHLQQVYFGNNYIKVITTDFCENMSNLKILDLRDNKIEQIPNEIAMLQHLIR 309

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LDL+NN L+ LP  +G +  L+ L L GN L+ +R  ++ G T  +LK+L+ +L ++ED 
Sbjct: 310 LDLTNNDLTDLPNSLGLLAHLQNLQLEGNKLKKIRGDIIKGGTMRILKHLKEQL-DDEDL 368

Query: 179 EA----STTKEDLITMATRLSVT-SKELSLEGMNLSAIPSEIWEAG---EITKLDLSRNS 230
           E+    ST + +  T   + ++  S+ L++    L+++P +++E     E+T +DL +N 
Sbjct: 369 ESVPKVSTMQHEAKTFPDKYTIKHSRSLNVTMKQLTSVPDDVFEEAKLAEVTIVDLCKNK 428

Query: 231 IQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
           +  +P  +   A +L  L LS N I + P+ I       +C+KL                
Sbjct: 429 LPSVPNGIQLVAENLTELNLSMNAISEIPEFIS------NCIKL---------------- 466

Query: 290 PMLQILDLSYNIAS-LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
              +  DL  N+ S LPE    SSL  L+EL L   +    P  +  +  L IL  S N 
Sbjct: 467 ---KYFDLGNNLLSDLPE--CLSSLVGLRELVLSNNRFVHIPDCVYSMVGLEILLASDNK 521

Query: 349 LQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
           +  I  EG KNLT +  LDL++NN+S +PPELG +   L+ L L GN  R  R  IL++G
Sbjct: 522 ITDINVEGLKNLTRIATLDLTNNNMSHIPPELGNV-TQLRTLELRGNCFRQPRYAILEQG 580

Query: 408 TKAVLKYLKDKIPE 421
           T +VL YL+D+IP+
Sbjct: 581 TASVLSYLRDRIPK 594



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 160/334 (47%), Gaps = 44/334 (13%)

Query: 90  KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
           +   L  LDL SN L+E   +      L+ L+L +N+++ LPPEI  +T L KL L+ N 
Sbjct: 74  QFKPLNYLDLSSNVLQEIPGKIGMFEDLTALNLQDNNITSLPPEICNLTKLTKLNLSHN- 132

Query: 149 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 208
                                              K +L+ M     V  + LSL   NL
Sbjct: 133 -----------------------------------KINLLPMEFYKLVELQVLSLAHNNL 157

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
             I     +   + +LDLS N + +LPP +     L  + LS NK+ + P  I+ +L  L
Sbjct: 158 EKISKNFADLVMLQQLDLSHNILTKLPPGMGFLVRLTEINLSHNKLIELPPDIV-NLRGL 216

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 328
             L + +N L  +P  G  ++  LQ L   +N  ++ E P F    HLQ++Y     ++ 
Sbjct: 217 LKLDVTHNDLVYLPKMG--ELAKLQFLYAQHN--NIEEIPDFEGCTHLQQVYFGNNYIKV 272

Query: 329 APTDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
             TD    +  L+ILDL  N ++ IP     L  L  LDL++N+++ LP  LGLL   LQ
Sbjct: 273 ITTDFCENMSNLKILDLRDNKIEQIPNEIAMLQHLIRLDLTNNDLTDLPNSLGLL-AHLQ 331

Query: 388 ALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
            L+L+GN L+ IR  I+  GT  +LK+LK+++ +
Sbjct: 332 NLQLEGNKLKKIRGDIIKGGTMRILKHLKEQLDD 365



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 174/398 (43%), Gaps = 56/398 (14%)

Query: 22  WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W    L  L  S N+L  +P  IG    L  L+L  N I S+P  I     L +  + +N
Sbjct: 73  WQFKPLNYLDLSSNVLQEIPGKIGMFEDLTALNLQDNNITSLPPEICNLTKLTKLNLSHN 132

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 138
            ++ LP E  KL +L  L L  N L++       L  L  LDLS+N L+ LPP +G +  
Sbjct: 133 KINLLPMEFYKLVELQVLSLAHNNLEKISKNFADLVMLQQLDLSHNILTKLPPGMGFLVR 192

Query: 139 LRKLLLTGNPLRTLRSSLVN-------GPTPALLKYL---------------RSRLPENE 176
           L ++ L+ N L  L   +VN         T   L YL                + + E  
Sbjct: 193 LTEINLSHNKLIELPPDIVNLRGLLKLDVTHNDLVYLPKMGELAKLQFLYAQHNNIEEIP 252

Query: 177 DSEASTTKEDLITMATRLSVTS----------KELSLEGMNLSAIPSEIWEAGEITKLDL 226
           D E  T  + +      + V +          K L L    +  IP+EI     + +LDL
Sbjct: 253 DFEGCTHLQQVYFGNNYIKVITTDFCENMSNLKILDLRDNKIEQIPNEIAMLQHLIRLDL 312

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT--SLSSLSCLK--LDNNPLRQVP 282
           + N + +LP  L   A LQ L L  NK+K     I+   ++  L  LK  LD+  L  VP
Sbjct: 313 TNNDLTDLPNSLGLLAHLQNLQLEGNKLKKIRGDIIKGGTMRILKHLKEQLDDEDLESVP 372

Query: 283 SDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDIL---RLQQL 339
                     ++  + +   + P+     ++ H + L +   QL   P D+    +L ++
Sbjct: 373 ----------KVSTMQHEAKTFPDK---YTIKHSRSLNVTMKQLTSVPDDVFEEAKLAEV 419

Query: 340 RILDLSQNSLQSIPEGFKNLT-SLTELDLSDNNISALP 376
            I+DL +N L S+P G + +  +LTEL+LS N IS +P
Sbjct: 420 TIVDLCKNKLPSVPNGIQLVAENLTELNLSMNAISEIP 457



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 1/101 (0%)

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
           PE   +     L  L L    L+E P  I   + L  L+L  N++ S+P    NLT LT+
Sbjct: 67  PEEENWWQFKPLNYLDLSSNVLQEIPGKIGMFEDLTALNLQDNNITSLPPEICNLTKLTK 126

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
           L+LS N I+ LP E   L   LQ L L  N L  I +   D
Sbjct: 127 LNLSHNKINLLPMEFYKL-VELQVLSLAHNNLEKISKNFAD 166


>gi|332222157|ref|XP_003260233.1| PREDICTED: leucine-rich repeat-containing protein 40 [Nomascus
           leucogenys]
          Length = 602

 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 148/458 (32%), Positives = 233/458 (50%), Gaps = 70/458 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQNR 57
           +  LD+  N LT +     AS++ L+ L+    S N L  +P  I  + RL  LD + N 
Sbjct: 176 LEDLDLSNNHLTTVP----ASFSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNL 231

Query: 58  ILSIPSSISG----------------------CCSLAEFYMGNNALSALPAE-LGKLSKL 94
           + +IP  ++G                      C  L E ++G N +  L AE L  L+ +
Sbjct: 232 LETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSI 291

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDL  N+LK    E   L+ L  LDLSNN +S LP  +G +  L+ L L GNPLRT+R
Sbjct: 292 LVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIR 350

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMN 207
             ++N  T  +LKYLRS++ ++  S++ +  E  +T+   +R+++    T K L      
Sbjct: 351 REIINKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQ 410

Query: 208 LSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILT 263
            + IP E+++A +   IT ++ S+N + E+P  +     + + + LS NK+  +    L 
Sbjct: 411 ATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVELKEMVSDVNLSFNKLS-FISVELC 469

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            L  L+ L L NN L  +P +  + +  LQ ++LS+N         F  LP +  LY   
Sbjct: 470 VLQKLTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN--------RFKMLPEV--LY--- 515

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLL 382
                      R+  L  + +S N + S+ P+  K + +LT LDL +N++  +PPELG  
Sbjct: 516 -----------RIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNC 564

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
             +L+ L LDGNP R  R  IL +GT AVL+YL+D+IP
Sbjct: 565 -VNLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 601



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 158/309 (51%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  I ++  L+KL ++ N L+ L   + N      L+ L+      
Sbjct: 107 LTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITN------LRNLKC----- 155

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                    L L+   L+ I     +   +  LDLS N +  +P
Sbjct: 156 -------------------------LYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVP 190

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              SS +SL  L LS N++K  P A +  +  L  L  ++N L  +P +    +  L++L
Sbjct: 191 ASFSSLSSLVRLNLSSNELKSLP-AEINRMKRLKHLDCNSNLLETIPPE-LAGMESLELL 248

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL++   Q+     + L+ L  + +LDL  N L+S+P
Sbjct: 249 YLRRNKLRFLPE---FPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP 305

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+++GT+ VLK
Sbjct: 306 DEIILLQSLERLDLSNNDISSLPYSLGNLH--LKFLALEGNPLRTIRREIINKGTQEVLK 363

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 364 YLRSKIKDD 372



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 146/320 (45%), Gaps = 54/320 (16%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +L +  + +N
Sbjct: 79  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN 138

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV---LDLSNNSLSGLPPEIGKM 136
            L  LP E+  L  L  L L  N+L   C+     +LS    LDLSNN L+ +P     +
Sbjct: 139 KLKILPEEITNLRNLKCLYLQHNELT--CISEGFEQLSNLEDLDLSNNHLTTVPASFSSL 196

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           ++L +L L+ N L++L         PA +  ++ RL                        
Sbjct: 197 SSLVRLNLSSNELKSL---------PAEINRMK-RL------------------------ 222

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K L      L  IP E+     +  L L RN ++ L PE  SC+ L+ L +  N+I+ 
Sbjct: 223 --KHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL-PEFPSCSLLKELHVGENQIEM 279

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH- 315
                L  L+S+  L L +N L+ VP D    +  L+ LDLS N          SSLP+ 
Sbjct: 280 LEAEHLKHLNSILVLDLRDNKLKSVP-DEIILLQSLERLDLSNN--------DISSLPYS 330

Query: 316 LQELYLRRMQLREAPTDILR 335
           L  L+L+ + L   P   +R
Sbjct: 331 LGNLHLKFLALEGNPLRTIR 350


>gi|197097556|ref|NP_001124652.1| leucine-rich repeat-containing protein 40 [Pongo abelii]
 gi|75070992|sp|Q5RFE9.1|LRC40_PONAB RecName: Full=Leucine-rich repeat-containing protein 40
 gi|55725286|emb|CAH89508.1| hypothetical protein [Pongo abelii]
          Length = 602

 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 145/455 (31%), Positives = 229/455 (50%), Gaps = 64/455 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT +  +  +S + L  L  S N L  +P  I  + RL  LD + N + +
Sbjct: 176 LEDLDLSNNRLTTVPASF-SSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLET 234

Query: 61  IPSSISG----------------------CCSLAEFYMGNNALSALPAE-LGKLSKLGTL 97
           IP  ++G                      C  L E ++G N +  L AE L  L+ +  L
Sbjct: 235 IPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVL 294

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL  N+LK    E   L+ L  LDLSNN +S LP  +G +  L+ L L GNPLRT+R  +
Sbjct: 295 DLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIRREI 353

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT------RLSVTSKELSLEGMNLSA 210
           +N  T  +LKYLRS++ ++  S++ +  E  +T+ +      R  +T K L       + 
Sbjct: 354 INKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRVNIRAIITLKILDYSDKQATL 413

Query: 211 IPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLS 266
           IP E+++A +   IT ++ S+N + E+P  +     + + + LS NK+  +    L  L 
Sbjct: 414 IPDEVFDAVKSNIITSINFSKNQLCEIPKRMVELKEMVSDVNLSFNKLS-FISLELCVLQ 472

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
            L+ L L NN L  +P +  + +  LQ ++LS+N         F  LP +  LY      
Sbjct: 473 KLTFLDLRNNFLNSLPEE-VESLVRLQTINLSFN--------RFKMLPEV--LY------ 515

Query: 327 REAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
                   R+  L  + +S N + S+ P+  K + +LT LDL +N++  +PPELG    +
Sbjct: 516 --------RIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNC-VN 566

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           L+ L LDGNP R  R  IL +GT  +L+YL+D+IP
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAGILEYLRDRIP 601



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 158/309 (51%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  I ++  L+KL ++ N L+ L   + N      L+ L+      
Sbjct: 107 LTVLDIHDNQLTSLPSAIRELQNLQKLNVSHNKLKILPEEITN------LRNLKC----- 155

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                    L L+   L+ I     +   +  LDLS N +  +P
Sbjct: 156 -------------------------LYLQHNELTCISEGFEQFSNLEDLDLSNNRLTTVP 190

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              SS +SL  L LS N++K  P A +  +  L  L  ++N L  +P +    +  L++L
Sbjct: 191 ASFSSLSSLVRLNLSSNELKSLP-AEINRMKRLKHLDCNSNLLETIPPE-LAGMESLELL 248

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL++   Q+     + L+ L  + +LDL  N L+S+P
Sbjct: 249 YLRRNKLRFLPE---FPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP 305

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+++GT+ VLK
Sbjct: 306 DEIILLQSLERLDLSNNDISSLPYSLGNLH--LKFLALEGNPLRTIRREIINKGTQEVLK 363

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 364 YLRSKIKDD 372



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 145/320 (45%), Gaps = 54/320 (16%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +L +  + +N
Sbjct: 79  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELQNLQKLNVSHN 138

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV---LDLSNNSLSGLPPEIGKM 136
            L  LP E+  L  L  L L  N+L   C+     + S    LDLSNN L+ +P     +
Sbjct: 139 KLKILPEEITNLRNLKCLYLQHNELT--CISEGFEQFSNLEDLDLSNNRLTTVPASFSSL 196

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           ++L +L L+ N L++L         PA +  ++ RL                        
Sbjct: 197 SSLVRLNLSSNELKSL---------PAEINRMK-RL------------------------ 222

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K L      L  IP E+     +  L L RN ++ L PE  SC+ L+ L +  N+I+ 
Sbjct: 223 --KHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL-PEFPSCSLLKELHVGENQIEM 279

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH- 315
                L  L+S+  L L +N L+ VP D    +  L+ LDLS N          SSLP+ 
Sbjct: 280 LEAEHLKHLNSILVLDLRDNKLKSVP-DEIILLQSLERLDLSNN--------DISSLPYS 330

Query: 316 LQELYLRRMQLREAPTDILR 335
           L  L+L+ + L   P   +R
Sbjct: 331 LGNLHLKFLALEGNPLRTIR 350


>gi|431896988|gb|ELK06252.1| Leucine-rich repeat-containing protein 40 [Pteropus alecto]
          Length = 574

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 146/455 (32%), Positives = 230/455 (50%), Gaps = 65/455 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT +  +   S + L  L  S N L  +P  I  + RL  LD + N + +
Sbjct: 149 LEDLDLSNNRLTTIPASF--SLSSLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLET 206

Query: 61  IPSSISG----------------------CCSLAEFYMGNNALSALPAE-LGKLSKLGTL 97
           IP  ++G                      C  L E ++G N +  L AE L  L+ +  L
Sbjct: 207 IPPELAGMESLELLYLRRNKLRFLPEFPSCKLLKELHVGENQIEMLGAEHLKHLTSILVL 266

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL  N+LK    E   L+ L  LDLSNN +S LP  +GK+  L+ L L GNP+RT+R  +
Sbjct: 267 DLRDNKLKSVPEEITLLQSLERLDLSNNDISSLPCSLGKLH-LKFLALEGNPIRTIRREI 325

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMNLSA 210
           +N  T  +LKYLRS++ +N  +++ +  E  +T+   +R+++    T K L       + 
Sbjct: 326 INKGTQEVLKYLRSKIKDNGPNQSDSIMETAMTLPSESRVNIHAITTLKILDYSDKQTTL 385

Query: 211 IPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLS 266
           IP E+++A +   IT ++ S+N + E+P  +     + + + LS NK+  +    L  L 
Sbjct: 386 IPDEVFDAVKSNIITSINFSKNELCEIPKRIVELKEMVSDVNLSFNKLS-FISVELCVLQ 444

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
            L+ L L NN L  +P +  + +  LQ ++LS+N         F  LP +         L
Sbjct: 445 KLTFLDLRNNFLSSLPKE-MESLIRLQTINLSFN--------RFRILPEV---------L 486

Query: 327 REAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
              PT       L  + +S N + S+ PE  K + +L  LDL +N++  +PPELG    +
Sbjct: 487 YHIPT-------LETVLVSNNQVGSVDPEKLKTMENLITLDLQNNDLLQIPPELGNC-VN 538

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           L+ L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 539 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 573



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/309 (33%), Positives = 159/309 (51%), Gaps = 46/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  I ++  L++L ++ N L+ L   + N      L+ L       
Sbjct: 80  LTVLDIHDNQLTSLPSAIRELENLQRLNVSHNKLKILPEEITN------LRNL------- 126

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                  K L L+   L+ IP    +   +  LDLS N +  +P
Sbjct: 127 -----------------------KGLYLQHNELTCIPEGFEQLFNLEDLDLSNNRLTTIP 163

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              S  +SL  L LS N++K  P A ++ +  L  L  ++N L  +P +    +  L++L
Sbjct: 164 ASFS-LSSLVRLNLSSNQLKSLP-AEISGMKRLKHLDCNSNLLETIPPE-LAGMESLELL 220

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL++   Q+     + L+ L  + +LDL  N L+S+P
Sbjct: 221 YLRRNKLRFLPE---FPSCKLLKELHVGENQIEMLGAEHLKHLTSILVLDLRDNKLKSVP 277

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           E    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNP+R+IRR I+++GT+ VLK
Sbjct: 278 EEITLLQSLERLDLSNNDISSLPCSLGKLH--LKFLALEGNPIRTIRREIINKGTQEVLK 335

Query: 414 YLKDKIPEN 422
           YL+ KI +N
Sbjct: 336 YLRSKIKDN 344


>gi|402854920|ref|XP_003892099.1| PREDICTED: leucine-rich repeat-containing protein 40 [Papio anubis]
          Length = 602

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 147/458 (32%), Positives = 233/458 (50%), Gaps = 70/458 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQNR 57
           +  LD+  N+LT +     AS++ L+ L+    S N L  +P  I  + RL  LD + N 
Sbjct: 176 LEDLDLSNNRLTTVP----ASFSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNL 231

Query: 58  ILSIPSSISG----------------------CCSLAEFYMGNNALSALPAE-LGKLSKL 94
           + +IP  ++G                      C  L E ++G N +  L AE L  L+ +
Sbjct: 232 LETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSI 291

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDL  N+LK    E   L+ L  LDLSNN +S LP  +G +  L+ L L GNPLRT+R
Sbjct: 292 LVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIR 350

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMN 207
             ++N  T  +LKYLRS++ ++  S++ +  E  +T+   +R+++    T K L      
Sbjct: 351 REIINKGTQEVLKYLRSKIKDDGPSQSESAAETAMTLPSESRVNIHAIITLKILDYSDKQ 410

Query: 208 LSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILT 263
            + IP E++ A +   IT ++ S+N + E+P  +     + + + LS NK+  +    L 
Sbjct: 411 ATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVELKEMVSDVNLSFNKLS-FISLELC 469

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            L  L+ L L NN L  +P +  + +  LQ ++LS+N         F  LP +  LY   
Sbjct: 470 MLQKLTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN--------RFKMLPEV--LY--- 515

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLL 382
                      R+  L  + +S N + S+ P+  K + +LT LDL +N++  +PPELG  
Sbjct: 516 -----------RIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNC 564

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
             +L+ L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 565 -VNLRTLLLDGNPFRVPRAAILIKGTAAILEYLRDRIP 601



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 158/309 (51%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  I ++  L+KL ++ N L+ L   + N      L+ L+      
Sbjct: 107 LTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITN------LRNLKC----- 155

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                    L L+   L+ I     +   +  LDLS N +  +P
Sbjct: 156 -------------------------LYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVP 190

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              SS +SL  L LS N++K  P A +  +  L  L  ++N L  +P +    +  L++L
Sbjct: 191 ASFSSLSSLVRLNLSSNQLKSLP-AEINRMKRLKHLDCNSNLLETIPPE-LAGMESLELL 248

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL++   Q+     + L+ L  + +LDL  N L+S+P
Sbjct: 249 YLRRNKLRFLPE---FPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP 305

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+++GT+ VLK
Sbjct: 306 DEITLLQSLERLDLSNNDISSLPYSLGNLH--LKFLALEGNPLRTIRREIINKGTQEVLK 363

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 364 YLRSKIKDD 372



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 146/320 (45%), Gaps = 54/320 (16%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +L +  + +N
Sbjct: 79  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN 138

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV---LDLSNNSLSGLPPEIGKM 136
            L  LP E+  L  L  L L  N+L   C+     +LS    LDLSNN L+ +P     +
Sbjct: 139 KLKILPEEITNLRNLKCLYLQHNELT--CISEGFEQLSNLEDLDLSNNRLTTVPASFSSL 196

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           ++L +L L+ N L++L         PA +  ++ RL                        
Sbjct: 197 SSLVRLNLSSNQLKSL---------PAEINRMK-RL------------------------ 222

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K L      L  IP E+     +  L L RN ++ L PE  SC+ L+ L +  N+I+ 
Sbjct: 223 --KHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL-PEFPSCSLLKELHVGENQIEM 279

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH- 315
                L  L+S+  L L +N L+ VP D    +  L+ LDLS N          SSLP+ 
Sbjct: 280 LEAEHLKHLNSILVLDLRDNKLKSVP-DEITLLQSLERLDLSNN--------DISSLPYS 330

Query: 316 LQELYLRRMQLREAPTDILR 335
           L  L+L+ + L   P   +R
Sbjct: 331 LGNLHLKFLALEGNPLRTIR 350


>gi|75075434|sp|Q4R3P6.1|LRC40_MACFA RecName: Full=Leucine-rich repeat-containing protein 40
 gi|67971856|dbj|BAE02270.1| unnamed protein product [Macaca fascicularis]
          Length = 602

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 146/455 (32%), Positives = 231/455 (50%), Gaps = 64/455 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT +  +  +S + L  L  S N L  +P  I  + RL  LD + N + +
Sbjct: 176 LEDLDLSNNRLTTVPASF-SSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLET 234

Query: 61  IPSSISG----------------------CCSLAEFYMGNNALSALPAE-LGKLSKLGTL 97
           IP  ++G                      C  L E ++G N +  L AE L  L+ +  L
Sbjct: 235 IPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVL 294

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL  N+LK    E   L+ L  LDLSNN +S LP  +G +  L+ L L GNPLRT+R  +
Sbjct: 295 DLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIRREI 353

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMNLSA 210
           +N  T  +LKYLRS++ ++  S++ +  E  +T+   +R+++    T K L       + 
Sbjct: 354 INKGTQEVLKYLRSKIKDDGPSQSESAAETAMTLPSESRVNIHAIITLKILDYSDKQATL 413

Query: 211 IPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLS 266
           IP E++ A +   IT ++ S+N + E+P  +     + + + LS NK+  +    L  L 
Sbjct: 414 IPDEVFNAVKSNIITSINFSKNQLCEIPKRMVELKEMVSDVNLSFNKLS-FISLELCMLQ 472

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
            L+ L L NN L  +P +  + +  LQ ++LS+N         F  LP +  LY      
Sbjct: 473 KLTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN--------RFKMLPEV--LY------ 515

Query: 327 REAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
                   R+  L  + +S N + S+ P+  K + +LT LDL +N++  +PPELG    +
Sbjct: 516 --------RIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNC-VN 566

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           L+ L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 567 LRTLLLDGNPFRVPRAAILIKGTAAILEYLRDRIP 601



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 157/309 (50%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  + ++  L+KL ++ N L+     + N      L+ L+      
Sbjct: 107 LTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIFPEEITN------LRNLKC----- 155

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                    L L+   L+ I     +   +  LDLS N +  +P
Sbjct: 156 -------------------------LYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVP 190

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              SS +SL  L LS N++K  P A +  +  L  L  ++N L  +P +    +  L++L
Sbjct: 191 ASFSSLSSLVRLNLSSNQLKSLP-AEINRMKRLKHLDCNSNLLETIPPE-LAGMESLELL 248

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL++   Q+     + L+ L  + +LDL  N L+S+P
Sbjct: 249 YLRRNKLRFLPE---FPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP 305

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+++GT+ VLK
Sbjct: 306 DEIILLQSLERLDLSNNDISSLPYSLGNLH--LKFLALEGNPLRTIRREIINKGTQEVLK 363

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 364 YLRSKIKDD 372



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 145/320 (45%), Gaps = 54/320 (16%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ S+PS++    +L +  + +N
Sbjct: 79  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHN 138

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV---LDLSNNSLSGLPPEIGKM 136
            L   P E+  L  L  L L  N+L   C+     +LS    LDLSNN L+ +P     +
Sbjct: 139 KLKIFPEEITNLRNLKCLYLQHNELT--CISEGFEQLSNLEDLDLSNNRLTTVPASFSSL 196

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           ++L +L L+ N L++L         PA +  ++ RL                        
Sbjct: 197 SSLVRLNLSSNQLKSL---------PAEINRMK-RL------------------------ 222

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K L      L  IP E+     +  L L RN ++ L PE  SC+ L+ L +  N+I+ 
Sbjct: 223 --KHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL-PEFPSCSLLKELHVGENQIEM 279

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH- 315
                L  L+S+  L L +N L+ VP D    +  L+ LDLS N          SSLP+ 
Sbjct: 280 LEAEHLKHLNSILVLDLRDNKLKSVP-DEIILLQSLERLDLSNN--------DISSLPYS 330

Query: 316 LQELYLRRMQLREAPTDILR 335
           L  L+L+ + L   P   +R
Sbjct: 331 LGNLHLKFLALEGNPLRTIR 350



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 29/203 (14%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S +L+L G NLS +P  +W       +D+   + Q L               S    + W
Sbjct: 38  SGQLNLSGRNLSEVPQCVWRIN----VDIPEEANQNL---------------SFGATERW 78

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
            +      + L+ L + NN L+ + +D  + +P L +LD+  N + SLP       L +L
Sbjct: 79  WEQ-----TDLTKLIISNNKLQSL-TDDLRLLPALTVLDIHDNQLTSLPS--AMRELENL 130

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           Q+L +   +L+  P +I  L+ L+ L L  N L  I EGF+ L++L +LDLS+N ++ +P
Sbjct: 131 QKLNVSHNKLKIFPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVP 190

Query: 377 PELGLLEPSLQALRLDGNPLRSI 399
                L  SL  L L  N L+S+
Sbjct: 191 ASFSSLS-SLVRLNLSSNQLKSL 212


>gi|386781944|ref|NP_001247952.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
 gi|355745366|gb|EHH49991.1| hypothetical protein EGM_00744 [Macaca fascicularis]
 gi|380814504|gb|AFE79126.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
 gi|383410331|gb|AFH28379.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
          Length = 602

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 147/458 (32%), Positives = 233/458 (50%), Gaps = 70/458 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQNR 57
           +  LD+  N+LT +     AS++ L+ L+    S N L  +P  I  + RL  LD + N 
Sbjct: 176 LEDLDLSNNRLTTVP----ASFSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNL 231

Query: 58  ILSIPSSISG----------------------CCSLAEFYMGNNALSALPAE-LGKLSKL 94
           + +IP  ++G                      C  L E ++G N +  L AE L  L+ +
Sbjct: 232 LETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSI 291

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDL  N+LK    E   L+ L  LDLSNN +S LP  +G +  L+ L L GNPLRT+R
Sbjct: 292 LVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIR 350

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMN 207
             ++N  T  +LKYLRS++ ++  S++ +  E  +T+   +R+++    T K L      
Sbjct: 351 REIINKGTQEVLKYLRSKIKDDGPSQSESAAETAMTLPSESRVNIHAIITLKILDYSDKQ 410

Query: 208 LSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILT 263
            + IP E++ A +   IT ++ S+N + E+P  +     + + + LS NK+  +    L 
Sbjct: 411 ATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVELKEMVSDVNLSFNKLS-FISLELC 469

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            L  L+ L L NN L  +P +  + +  LQ ++LS+N         F  LP +  LY   
Sbjct: 470 MLQKLTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN--------RFKMLPEV--LY--- 515

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLL 382
                      R+  L  + +S N + S+ P+  K + +LT LDL +N++  +PPELG  
Sbjct: 516 -----------RIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNC 564

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
             +L+ L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 565 -VNLRTLLLDGNPFRVPRAAILIKGTAAILEYLRDRIP 601



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 157/309 (50%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  + ++  L+KL ++ N L+     + N      L+ L+      
Sbjct: 107 LTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIFPEEITN------LRNLKC----- 155

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                    L L+   L+ I     +   +  LDLS N +  +P
Sbjct: 156 -------------------------LYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVP 190

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              SS +SL  L LS N++K  P A +  +  L  L  ++N L  +P +    +  L++L
Sbjct: 191 ASFSSLSSLVRLNLSSNQLKSLP-AEINRMKRLKHLDCNSNLLETIPPE-LAGMESLELL 248

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL++   Q+     + L+ L  + +LDL  N L+S+P
Sbjct: 249 YLRRNKLRFLPE---FPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP 305

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+++GT+ VLK
Sbjct: 306 DEITLLQSLERLDLSNNDISSLPYSLGNLH--LKFLALEGNPLRTIRREIINKGTQEVLK 363

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 364 YLRSKIKDD 372



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 145/320 (45%), Gaps = 54/320 (16%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ S+PS++    +L +  + +N
Sbjct: 79  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHN 138

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV---LDLSNNSLSGLPPEIGKM 136
            L   P E+  L  L  L L  N+L   C+     +LS    LDLSNN L+ +P     +
Sbjct: 139 KLKIFPEEITNLRNLKCLYLQHNELT--CISEGFEQLSNLEDLDLSNNRLTTVPASFSSL 196

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           ++L +L L+ N L++L         PA +  ++ RL                        
Sbjct: 197 SSLVRLNLSSNQLKSL---------PAEINRMK-RL------------------------ 222

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K L      L  IP E+     +  L L RN ++ L PE  SC+ L+ L +  N+I+ 
Sbjct: 223 --KHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL-PEFPSCSLLKELHVGENQIEM 279

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH- 315
                L  L+S+  L L +N L+ VP D    +  L+ LDLS N          SSLP+ 
Sbjct: 280 LEAEHLKHLNSILVLDLRDNKLKSVP-DEITLLQSLERLDLSNN--------DISSLPYS 330

Query: 316 LQELYLRRMQLREAPTDILR 335
           L  L+L+ + L   P   +R
Sbjct: 331 LGNLHLKFLALEGNPLRTIR 350



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 29/203 (14%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S +L+L G NLS +P  +W       +D+   + Q L               S    + W
Sbjct: 38  SGQLNLSGRNLSEVPQCVWRIN----VDIPEEANQNL---------------SFGATERW 78

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
            +      + L+ L + NN L+ + +D  + +P L +LD+  N + SLP       L +L
Sbjct: 79  WEQ-----TDLTKLIISNNKLQSL-TDDLRLLPALTVLDIHDNQLTSLPS--AMRELENL 130

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           Q+L +   +L+  P +I  L+ L+ L L  N L  I EGF+ L++L +LDLS+N ++ +P
Sbjct: 131 QKLNVSHNKLKIFPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVP 190

Query: 377 PELGLLEPSLQALRLDGNPLRSI 399
                L  SL  L L  N L+S+
Sbjct: 191 ASFSSLS-SLVRLNLSSNQLKSL 212


>gi|71896833|ref|NP_001026466.1| leucine-rich repeat-containing protein 40 [Gallus gallus]
 gi|82233906|sp|Q5ZLN0.1|LRC40_CHICK RecName: Full=Leucine-rich repeat-containing protein 40
 gi|53129131|emb|CAG31363.1| hypothetical protein RCJMB04_5h5 [Gallus gallus]
          Length = 603

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 140/436 (32%), Positives = 228/436 (52%), Gaps = 48/436 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  N+L  L  + I++   L +L  +KN L  +P  + S++ L +L L +N++ S
Sbjct: 199 LVRLNLACNQLKDLPAD-ISAMKSLRQLDCTKNYLESVPSELASMASLEQLYLRKNKLRS 257

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 118
           +P  +  C  L E + G N +  L AE L  L+ L  L+L  N++K    E   L +L  
Sbjct: 258 LPE-LPSCKLLKELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLER 316

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LDL+NN +S LP  +G ++ L+ L L GNPLRT+R  L+   T  LLKYLRSR+   +D 
Sbjct: 317 LDLANNDISRLPYTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSRI---QDD 373

Query: 179 EASTTKEDLITMAT-----RLSV----TSKELSLEGMNLSAIPSEIWEA---GEITKLDL 226
           +AS  +E  +T  T     R+++    T K L      ++ IP +++ A     +T ++ 
Sbjct: 374 KASPNEEPPVTAMTLPSESRINMHAITTLKLLDYSEKQVAVIPDDVFSAVRSNPVTSVNF 433

Query: 227 SRNSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           S+N +  +PP +     S+  +    NKI       L +L  L+ L + NN L  +P + 
Sbjct: 434 SKNQLTAIPPRIVELKDSVCDVNFGFNKISSV-SLELCTLHKLTHLDIRNNVLTSLPEE- 491

Query: 286 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
            + +  LQ+++LS+N                        + +  P+ + R+  L  + LS
Sbjct: 492 MEALTRLQVINLSFN------------------------RFKVFPSVLYRMLALETILLS 527

Query: 346 QNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
            N + SI P   K +  L  LDL +N++  +PPELG  E +L+ L L+GNP R+ R  IL
Sbjct: 528 NNQVGSIDPLQLKKMEQLGTLDLQNNDLLQVPPELGNCE-TLRTLLLEGNPFRTPRAAIL 586

Query: 405 DRGTKAVLKYLKDKIP 420
            +GT AVL+YL+ +IP
Sbjct: 587 AKGTAAVLEYLRSRIP 602



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 176/336 (52%), Gaps = 49/336 (14%)

Query: 92  SKLGTLDLHSNQLKEYCV-EACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
           + L  L L SNQL+  C+ E  +L   L+VLD+ +N L+ LP  +G++  L+KL ++ N 
Sbjct: 82  TDLTKLILASNQLR--CLSEDVRLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNK 139

Query: 149 LRTLRSSLVNGPTPALLKYLRSRL-PENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 207
           L+++   L+       L +L+  L   NE S        L+++        +EL L   +
Sbjct: 140 LKSIPEELLQ------LSHLKGLLLQHNELSHLPDGFGQLVSL--------EELDLSNNH 185

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+ IP        + +L+L+ N +++LP ++S+  SL+ L  ++N ++  P   L S++S
Sbjct: 186 LTDIPKSFALLINLVRLNLACNQLKDLPADISAMKSLRQLDCTKNYLESVPSE-LASMAS 244

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L  L L  N LR                       SLPE P   S   L+EL+    Q+ 
Sbjct: 245 LEQLYLRKNKLR-----------------------SLPELP---SCKLLKELHAGENQIE 278

Query: 328 EAPTDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
               + L+ L  L +L+L  N ++S+P+    L  L  LDL++N+IS LP  LG L   L
Sbjct: 279 ILNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLS-QL 337

Query: 387 QALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
           + L L+GNPLR+IRR +L +GT+ +LKYL+ +I ++
Sbjct: 338 KFLALEGNPLRTIRRDLLQKGTQELLKYLRSRIQDD 373



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 190/425 (44%), Gaps = 85/425 (20%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI + N L  + E +  L  L  LD+H N++ S+PS++    +L +  + +N
Sbjct: 79  WEQTDLTKLILASNQLRCLSEDVRLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHN 138

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 138
            L ++P EL +LS L  L L  N+L        QL  L  LDLSNN L+ +P     +  
Sbjct: 139 KLKSIPEELLQLSHLKGLLLQHNELSHLPDGFGQLVSLEELDLSNNHLTDIPKSFALLIN 198

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L +L L  N L+ L         PA +  ++S                            
Sbjct: 199 LVRLNLACNQLKDL---------PADISAMKSL--------------------------- 222

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L      L ++PSE+     + +L L +N ++ L PEL SC  L+ L    N+I+   
Sbjct: 223 RQLDCTKNYLESVPSELASMASLEQLYLRKNKLRSL-PELPSCKLLKELHAGENQIEILN 281

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP------------ 305
              L  L+SLS L+L +N ++ VP D    +  L+ LDL+ N I+ LP            
Sbjct: 282 AENLKHLNSLSVLELRDNKIKSVP-DEITLLQKLERLDLANNDISRLPYTLGNLSQLKFL 340

Query: 306 --ENPPFSSLPH------LQEL--YLR-RMQ-----------------LREAPTDILRLQ 337
             E  P  ++         QEL  YLR R+Q                   E+  ++  + 
Sbjct: 341 ALEGNPLRTIRRDLLQKGTQELLKYLRSRIQDDKASPNEEPPVTAMTLPSESRINMHAIT 400

Query: 338 QLRILDLSQNSLQSIPEG-FKNLTS--LTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            L++LD S+  +  IP+  F  + S  +T ++ S N ++A+PP +  L+ S+  +    N
Sbjct: 401 TLKLLDYSEKQVAVIPDDVFSAVRSNPVTSVNFSKNQLTAIPPRIVELKDSVCDVNFGFN 460

Query: 395 PLRSI 399
            + S+
Sbjct: 461 KISSV 465



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 28/191 (14%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R +  S +L+L G  L  +P  +W     T  +  +N                   LS  
Sbjct: 33  RAARKSGQLNLAGRGLGEVPQHVWRINLDTPEEAHQN-------------------LSFG 73

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
               W +      + L+ L L +N LR + S+  + +P L +LD+  N + SLP      
Sbjct: 74  AADRWWEQ-----TDLTKLILASNQLRCL-SEDVRLLPALTVLDVHDNQLTSLPS--ALG 125

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
            L +LQ+L +   +L+  P ++L+L  L+ L L  N L  +P+GF  L SL ELDLS+N+
Sbjct: 126 QLENLQKLDVSHNKLKSIPEELLQLSHLKGLLLQHNELSHLPDGFGQLVSLEELDLSNNH 185

Query: 372 ISALPPELGLL 382
           ++ +P    LL
Sbjct: 186 LTDIPKSFALL 196


>gi|148230653|ref|NP_001085672.1| leucine-rich repeat-containing protein 40 [Xenopus laevis]
 gi|82236544|sp|Q6GPJ5.1|LRC40_XENLA RecName: Full=Leucine-rich repeat-containing protein 40
 gi|49257387|gb|AAH73124.1| MGC84527 protein [Xenopus laevis]
          Length = 605

 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 143/436 (32%), Positives = 217/436 (49%), Gaps = 46/436 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + K ++  NKLT L    I     L +L  + NLL  +P ++  +  L +L L QN++  
Sbjct: 199 LVKFNLSSNKLTALPTE-IGKMKNLRQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTY 257

Query: 61  IPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 118
           +P  +     L E ++GNN +  L P  L  LS L  L+L  N+LK    E   L+ L  
Sbjct: 258 LPE-LPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPKEISLLKGLER 316

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL--PENE 176
           LDLSNN +  LP  +G +  L+ L L GNPLR +R  ++N  T  LLKYL+ R+  P+  
Sbjct: 317 LDLSNNDIGSLPDTLGSLPNLKSLQLDGNPLRGIRRDILNKGTQELLKYLKGRVQTPDMT 376

Query: 177 DSEASTTKEDLITMAT------RLSVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLS 227
             EA+   +  +T+ +         +T K L       S IP  ++ A     IT ++ S
Sbjct: 377 TQEAANPPDTAMTLPSDSVINAHAIMTLKTLEYCEKQASLIPEAVFNAAASSPITTVNFS 436

Query: 228 RNSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           +N + E+P  +     S+  + L  NKI        +S+S   C+ L             
Sbjct: 437 KNQLTEVPARIVEMKDSVYDVNLGFNKI--------SSISLNLCMLLK------------ 476

Query: 287 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
                L  LD+  N +ASLP  P   +L  LQ + L   + +  P  +  +  L  + +S
Sbjct: 477 -----LTHLDMRNNALASLP--PEMEALTRLQSIILSFNRFKHFPDVLYTIPNLETILIS 529

Query: 346 QNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
            N + SI P   K +T L+ LDL +N++  +PP LG  E SL+AL L+GNP R+ R TIL
Sbjct: 530 SNQIGSIDPIQLKKMTKLSTLDLQNNDLLQIPPALGNCE-SLRALHLEGNPFRNPRATIL 588

Query: 405 DRGTKAVLKYLKDKIP 420
            +GT A+L+YL+ +IP
Sbjct: 589 AKGTVAILEYLRSRIP 604



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 89/264 (33%), Positives = 138/264 (52%), Gaps = 48/264 (18%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L +    ++++P  I E   + KL++S N I++LP EL    +L++ +L  N++++ PD+
Sbjct: 110 LDIHDNQIASLPCAIRELTNLQKLNISHNKIKQLPNELQHLQNLKSFLLQHNQLEELPDS 169

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP-------------- 305
           I   LS L  L + NN LR V S     +  L   +LS N + +LP              
Sbjct: 170 I-GHLSILEELDVSNNCLRSV-SSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLRQLDC 227

Query: 306 -----ENPPFS--SLPHLQELYLRR------------MQLRE-----------APTDILR 335
                EN P S   +  L++LYLR+             +L+E            P  +  
Sbjct: 228 TSNLLENVPASVAGMESLEQLYLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQN 287

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L  L +L+L  N L+ +P+    L  L  LDLS+N+I +LP  LG L P+L++L+LDGNP
Sbjct: 288 LSSLSVLELRYNKLKVLPKEISLLKGLERLDLSNNDIGSLPDTLGSL-PNLKSLQLDGNP 346

Query: 396 LRSIRRTILDRGTKAVLKYLKDKI 419
           LR IRR IL++GT+ +LKYLK ++
Sbjct: 347 LRGIRRDILNKGTQELLKYLKGRV 370



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 190/454 (41%), Gaps = 95/454 (20%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE------ 73
           W  T LT+LI + N L  + E I  L  L+ LD+H N+I S+P +I    +L +      
Sbjct: 79  WEQTDLTKLILASNKLQALSEDISLLPALVVLDIHDNQIASLPCAIRELTNLQKLNISHN 138

Query: 74  -----------------FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 115
                            F + +N L  LP  +G LS L  LD+ +N L+       QL  
Sbjct: 139 KIKQLPNELQHLQNLKSFLLQHNQLEELPDSIGHLSILEELDVSNNCLRSVSSSVGQLTG 198

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR----SR 171
           L   +LS+N L+ LP EIGKM  LR+L  T N L  + +S+    +   L YLR    + 
Sbjct: 199 LVKFNLSSNKLTALPTEIGKMKNLRQLDCTSNLLENVPASVAGMESLEQL-YLRQNKLTY 257

Query: 172 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 231
           LPE             +T    L V + ++   G      P  +     ++ L+L  N +
Sbjct: 258 LPE----------LPFLTKLKELHVGNNQIQTLG------PEHLQNLSSLSVLELRYNKL 301

Query: 232 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV---------- 281
           + LP E+S    L+ L LS N I   PD  L SL +L  L+LD NPLR +          
Sbjct: 302 KVLPKEISLLKGLERLDLSNNDIGSLPDT-LGSLPNLKSLQLDGNPLRGIRRDILNKGTQ 360

Query: 282 ------------------------------PSDGF---KDIPMLQILDLSYNIASLPENP 308
                                         PSD       I  L+ L+     ASL    
Sbjct: 361 ELLKYLKGRVQTPDMTTQEAANPPDTAMTLPSDSVINAHAIMTLKTLEYCEKQASLIPEA 420

Query: 309 PFSSLPH--LQELYLRRMQLREAPTDILRLQQ-LRILDLSQNSLQSIPEGFKNLTSLTEL 365
            F++     +  +   + QL E P  I+ ++  +  ++L  N + SI      L  LT L
Sbjct: 421 VFNAAASSPITTVNFSKNQLTEVPARIVEMKDSVYDVNLGFNKISSISLNLCMLLKLTHL 480

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           D+ +N +++LPPE+  L   LQ++ L  N  +  
Sbjct: 481 DMRNNALASLPPEMEALT-RLQSIILSFNRFKHF 513


>gi|410920716|ref|XP_003973829.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Takifugu
           rubripes]
          Length = 597

 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 144/453 (31%), Positives = 234/453 (51%), Gaps = 67/453 (14%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +LD+  N+L  L  N +   T L +L  S N L+ +P++IG L+++  LD   N++  +P
Sbjct: 176 ELDLSNNQLKDLPAN-VGCLTCLQKLNLSHNKLSWLPDSIGQLTKVKMLDCSNNQLTEVP 234

Query: 63  SSISGCCSLAEFYM---------------------GNNALSAL-PAELGKLSKLGTLDLH 100
           +S+S   +L + Y+                     GNN +  L P +L  L+ +  L+L 
Sbjct: 235 ASLSQMSALEQLYLRHNKLDLLPNLKSPVLKDLYFGNNQIEQLEPEQLSSLTAISVLELR 294

Query: 101 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 159
            N+++    E   L  L+ LDL+NN +S LP  +G ++ L+ +LL GNPLR LR  L+  
Sbjct: 295 DNKIRSLPEEITLLSSLTRLDLTNNDISSLPASLGLLSHLKVVLLEGNPLRGLRRDLLTK 354

Query: 160 PTPALLKYLRSRLPENEDSEASTTKE-DLITMATRLSV------TSKELSLEGMNLSAIP 212
            T  LLKYLR R+ E   S AS  +E   +T+ ++  V      T K L       +AIP
Sbjct: 355 GTTELLKYLRGRITE---SSASAAEEPTAMTLPSQAKVNFHNIQTLKMLQYSEKQTAAIP 411

Query: 213 SEIWEAG---EITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
            E+++A     +T ++ S+N +  +PP  L   +SL  + L  N++    D I  SL  L
Sbjct: 412 DEVFDAAVNQGVTAVNFSKNLLTSIPPRLLEFQSSLSDINLGFNRLAGC-DPI-CSLLQL 469

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 328
           + + L NN + ++P++  K++  L+ + L+YN         F S P +  LY        
Sbjct: 470 THIDLRNNQMAELPAE-MKNLTKLRSIILNYN--------GFKSFPGV--LY-------- 510

Query: 329 APTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
                 ++  L  + L  N +  + P     L+ L+ LDLS+N++  +PPELGL   SL+
Sbjct: 511 ------QIVSLETILLGNNQVDGVDPSHLMKLSHLSTLDLSNNDLLKIPPELGLCT-SLR 563

Query: 388 ALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            L L+GNP R+ R  I+ +GT AV++YL+ +IP
Sbjct: 564 CLSLEGNPFRAPRAAIVAKGTDAVMEYLRSRIP 596



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 174/334 (52%), Gaps = 48/334 (14%)

Query: 92  SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
           + L  L L SNQL +   +   L  L+VLDL +N LS LP  + ++  L++L L+ N L 
Sbjct: 80  TDLTKLLLASNQLTQLSDDIRLLPALTVLDLDDNQLSCLPEALQELQELQQLRLSHNQLT 139

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
           +L         PA +  L+                +L ++A + ++           L +
Sbjct: 140 SL---------PAWVANLK----------------NLASLALQFNL-----------LVS 163

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSL 268
           +P E+     + +LDLS N +++LP  +     LQ L LS NK+   PD+I  LT +  L
Sbjct: 164 LPEELGHLKSLIELDLSNNQLKDLPANVGCLTCLQKLNLSHNKLSWLPDSIGQLTKVKML 223

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 328
            C    NN L +VP+     +  L+ L L +N   L   P   S P L++LY    Q+ +
Sbjct: 224 DC---SNNQLTEVPA-SLSQMSALEQLYLRHNKLDLL--PNLKS-PVLKDLYFGNNQIEQ 276

Query: 329 -APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
             P  +  L  + +L+L  N ++S+PE    L+SLT LDL++N+IS+LP  LGLL   L+
Sbjct: 277 LEPEQLSSLTAISVLELRDNKIRSLPEEITLLSSLTRLDLTNNDISSLPASLGLLS-HLK 335

Query: 388 ALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
            + L+GNPLR +RR +L +GT  +LKYL+ +I E
Sbjct: 336 VVLLEGNPLRGLRRDLLTKGTTELLKYLRGRITE 369



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 190/405 (46%), Gaps = 38/405 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++KL +  N+LT LS++ I     LT L    N L+ +PE +  L  L +L L  N++ S
Sbjct: 82  LTKLLLASNQLTQLSDD-IRLLPALTVLDLDDNQLSCLPEALQELQELQQLRLSHNQLTS 140

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVL 119
           +P+ ++   +LA   +  N L +LP ELG L  L  LDL +NQLK+      C   L  L
Sbjct: 141 LPAWVANLKNLASLALQFNLLVSLPEELGHLKSLIELDLSNNQLKDLPANVGCLTCLQKL 200

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +LS+N LS LP  IG++T ++ L  + N L  + +SL        L YLR          
Sbjct: 201 NLSHNKLSWLPDSIGQLTKVKMLDCSNNQLTEVPASLSQMSALEQL-YLRH--------- 250

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAI-PSEIWEAGEITKLDLSRNSIQELPPEL 238
               K DL  +    S   K+L      +  + P ++     I+ L+L  N I+ LP E+
Sbjct: 251 ---NKLDL--LPNLKSPVLKDLYFGNNQIEQLEPEQLSSLTAISVLELRDNKIRSLPEEI 305

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD----GFKDIPMLQI 294
           +  +SL  L L+ N I   P A L  LS L  + L+ NPLR +  D    G  ++     
Sbjct: 306 TLLSSLTRLDLTNNDISSLP-ASLGLLSHLKVVLLEGNPLRGLRRDLLTKGTTELLKYLR 364

Query: 295 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
             ++ + AS  E P   +LP             +A  +   +Q L++L  S+    +IP+
Sbjct: 365 GRITESSASAAEEPTAMTLP------------SQAKVNFHNIQTLKMLQYSEKQTAAIPD 412

Query: 355 GFKNLT---SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
              +      +T ++ S N ++++PP L   + SL  + L  N L
Sbjct: 413 EVFDAAVNQGVTAVNFSKNLLTSIPPRLLEFQSSLSDINLGFNRL 457


>gi|21361633|ref|NP_060238.3| leucine-rich repeat-containing protein 40 [Homo sapiens]
 gi|74761553|sp|Q9H9A6.1|LRC40_HUMAN RecName: Full=Leucine-rich repeat-containing protein 40
 gi|10434638|dbj|BAB14326.1| unnamed protein product [Homo sapiens]
 gi|14250313|gb|AAH08586.1| Leucine rich repeat containing 40 [Homo sapiens]
 gi|119626865|gb|EAX06460.1| leucine rich repeat containing 40 [Homo sapiens]
 gi|325463579|gb|ADZ15560.1| leucine rich repeat containing 40 [synthetic construct]
          Length = 602

 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 145/455 (31%), Positives = 231/455 (50%), Gaps = 64/455 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N LT +  +  +S + L  L  S N L  +P  I  + RL  LD + N + +
Sbjct: 176 LEDLDLSNNHLTTVPASF-SSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLET 234

Query: 61  IPSSISG----------------------CCSLAEFYMGNNALSALPAE-LGKLSKLGTL 97
           IP  ++G                      C  L E ++G N +  L AE L  L+ +  L
Sbjct: 235 IPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVL 294

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL  N+LK    E   LR L  LDLSNN +S LP  +G +  L+ L L GNPLRT+R  +
Sbjct: 295 DLRDNKLKSVPDEIILLRSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIRREI 353

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMNLSA 210
           ++  T  +LKYLRS++ ++  S++ +  E  +T+   +R+++    T K L       + 
Sbjct: 354 ISKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATL 413

Query: 211 IPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLS 266
           IP E+++A +   +T ++ S+N + E+P  +     + + + LS NK+  +    L  L 
Sbjct: 414 IPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVELKEMVSDVDLSFNKLS-FISLELCVLQ 472

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
            L+ L L NN L  +P +  + +  LQ ++LS+N         F  LP +  LY      
Sbjct: 473 KLTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN--------RFKMLPEV--LY------ 515

Query: 327 REAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
                   R+  L  + +S N + S+ P+  K + +LT LDL +N++  +PPELG    +
Sbjct: 516 --------RIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNC-VN 566

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           L+ L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 157/309 (50%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  I ++  L+KL ++ N L+ L   + N      L+ L+      
Sbjct: 107 LTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITN------LRNLKC----- 155

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                    L L+   L+ I     +   +  LDLS N +  +P
Sbjct: 156 -------------------------LYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVP 190

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              SS +SL  L LS N++K  P A +  +  L  L  ++N L  +P +    +  L++L
Sbjct: 191 ASFSSLSSLVRLNLSSNELKSLP-AEINRMKRLKHLDCNSNLLETIPPE-LAGMESLELL 248

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL++   Q+     + L+ L  + +LDL  N L+S+P
Sbjct: 249 YLRRNKLRFLPE---FPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP 305

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+ +GT+ VLK
Sbjct: 306 DEIILLRSLERLDLSNNDISSLPYSLGNLH--LKFLALEGNPLRTIRREIISKGTQEVLK 363

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 364 YLRSKIKDD 372



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 146/320 (45%), Gaps = 54/320 (16%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +L +  + +N
Sbjct: 79  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN 138

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV---LDLSNNSLSGLPPEIGKM 136
            L  LP E+  L  L  L L  N+L   C+     +LS    LDLSNN L+ +P     +
Sbjct: 139 KLKILPEEITNLRNLKCLYLQHNELT--CISEGFEQLSNLEDLDLSNNHLTTVPASFSSL 196

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           ++L +L L+ N L++L         PA +  ++ RL                        
Sbjct: 197 SSLVRLNLSSNELKSL---------PAEINRMK-RL------------------------ 222

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K L      L  IP E+     +  L L RN ++ L PE  SC+ L+ L +  N+I+ 
Sbjct: 223 --KHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL-PEFPSCSLLKELHVGENQIEM 279

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH- 315
                L  L+S+  L L +N L+ VP D    +  L+ LDLS N          SSLP+ 
Sbjct: 280 LEAEHLKHLNSILVLDLRDNKLKSVP-DEIILLRSLERLDLSNN--------DISSLPYS 330

Query: 316 LQELYLRRMQLREAPTDILR 335
           L  L+L+ + L   P   +R
Sbjct: 331 LGNLHLKFLALEGNPLRTIR 350


>gi|32425389|gb|AAH03407.2| LRRC40 protein, partial [Homo sapiens]
          Length = 581

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 146/458 (31%), Positives = 233/458 (50%), Gaps = 70/458 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQNR 57
           +  LD+  N LT +     AS++ L+ L+    S N L  +P  I  + RL  LD + N 
Sbjct: 155 LEDLDLSNNHLTTVP----ASFSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNL 210

Query: 58  ILSIPSSISG----------------------CCSLAEFYMGNNALSALPAE-LGKLSKL 94
           + +IP  ++G                      C  L E ++G N +  L AE L  L+ +
Sbjct: 211 LETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSI 270

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDL  N+LK    E   LR L  LDLSNN +S LP  +G +  L+ L L GNPLRT+R
Sbjct: 271 LVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIR 329

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMN 207
             +++  T  +LKYLRS++ ++  S++ +  E  +T+   +R+++    T K L      
Sbjct: 330 REIISKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQ 389

Query: 208 LSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILT 263
            + IP E+++A +   +T ++ S+N + E+P  +     + + + LS NK+  +    L 
Sbjct: 390 ATLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVELKEMVSDVDLSFNKLS-FISLELC 448

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            L  L+ L L NN L  +P +  + +  LQ ++LS+N         F  LP +  LY   
Sbjct: 449 VLQKLTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN--------RFKMLPEV--LY--- 494

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLL 382
                      R+  L  + +S N + S+ P+  K + +LT LDL +N++  +PPELG  
Sbjct: 495 -----------RIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNC 543

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
             +L+ L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 544 -VNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 580



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 157/309 (50%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  I ++  L+KL ++ N L+ L   + N      L+ L+      
Sbjct: 86  LTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITN------LRNLKC----- 134

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                    L L+   L+ I     +   +  LDLS N +  +P
Sbjct: 135 -------------------------LYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVP 169

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              SS +SL  L LS N++K  P A +  +  L  L  ++N L  +P +    +  L++L
Sbjct: 170 ASFSSLSSLVRLNLSSNELKSLP-AEINRMKRLKHLDCNSNLLETIPPE-LAGMESLELL 227

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL++   Q+     + L+ L  + +LDL  N L+S+P
Sbjct: 228 YLRRNKLRFLPE---FPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP 284

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+ +GT+ VLK
Sbjct: 285 DEIILLRSLERLDLSNNDISSLPYSLGNLH--LKFLALEGNPLRTIRREIISKGTQEVLK 342

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 343 YLRSKIKDD 351



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 146/320 (45%), Gaps = 54/320 (16%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +L +  + +N
Sbjct: 58  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN 117

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV---LDLSNNSLSGLPPEIGKM 136
            L  LP E+  L  L  L L  N+L   C+     +LS    LDLSNN L+ +P     +
Sbjct: 118 KLKILPEEITNLRNLKCLYLQHNELT--CISEGFEQLSNLEDLDLSNNHLTTVPASFSSL 175

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           ++L +L L+ N L++L         PA +  ++ RL                        
Sbjct: 176 SSLVRLNLSSNELKSL---------PAEINRMK-RL------------------------ 201

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K L      L  IP E+     +  L L RN ++ L PE  SC+ L+ L +  N+I+ 
Sbjct: 202 --KHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL-PEFPSCSLLKELHVGENQIEM 258

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH- 315
                L  L+S+  L L +N L+ VP D    +  L+ LDLS N          SSLP+ 
Sbjct: 259 LEAEHLKHLNSILVLDLRDNKLKSVP-DEIILLRSLERLDLSNN--------DISSLPYS 309

Query: 316 LQELYLRRMQLREAPTDILR 335
           L  L+L+ + L   P   +R
Sbjct: 310 LGNLHLKFLALEGNPLRTIR 329


>gi|255070745|ref|XP_002507454.1| predicted protein [Micromonas sp. RCC299]
 gi|226522729|gb|ACO68712.1| predicted protein [Micromonas sp. RCC299]
          Length = 642

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 131/382 (34%), Positives = 202/382 (52%), Gaps = 20/382 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L ++ N+LT +    I   T LT L    N L  +P  IG L+ L  L+L  NR+ S
Sbjct: 53  LGVLHLDNNQLTSVPAE-IGQLTSLTHLYLGCNQLTSVPAWIGQLTSLTHLELWSNRLTS 111

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I    SL + ++  N L+++PAE+G+L  L  L L+ NQL     E  QL  L+ L
Sbjct: 112 VPAEIGQLASLEKLHLEGNQLTSVPAEIGQLVALTELTLYGNQLTSVPAEIGQLTSLTDL 171

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N L+ +P  IG++T+L++L L GN L ++ + +      A L++L   L +N+ + 
Sbjct: 172 YLGCNQLTSVPAWIGQLTSLKELTLYGNQLTSVPAEI---GQLAALQWL--SLKDNKLTS 226

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                  L  +        K L L G  L+++P+EI +   +  L L  N +  +P E+ 
Sbjct: 227 VPAEIGQLRAL--------KLLRLNGNQLTSVPAEIGQLASLENLLLGHNQLTSVPAEIG 278

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              SL+ L L  NK+   P  I   L+SL  L+L+ N L  VP++ ++ +  L+ L+L Y
Sbjct: 279 QLTSLRKLYLDHNKLTSVPVEI-GQLTSLVRLELEGNQLTSVPAEIWQ-LTSLKWLNLGY 336

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N + S+P       L  L+EL L   QL   P ++ RL  LR L LS+N L S+P     
Sbjct: 337 NQLTSVPAE--IGQLAALKELCLYGNQLTSVPAEVGRLSALRKLSLSRNRLTSLPAEIGQ 394

Query: 359 LTSLTELDLSDNNISALPPELG 380
           LTSL EL LSDN ++++P E+G
Sbjct: 395 LTSLRELRLSDNQLTSVPAEIG 416



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 133/386 (34%), Positives = 199/386 (51%), Gaps = 23/386 (5%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +P  IG L+ L  L L  N++ S+P+ I    SL + Y+ +N L+++P E+G+L+
Sbjct: 245 NQLTSVPAEIGQLASLENLLLGHNQLTSVPAEIGQLTSLRKLYLDHNKLTSVPVEIGQLT 304

Query: 93  KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
            L  L+L  NQL     E  QL  L  L+L  N L+ +P EIG++  L++L L GN L +
Sbjct: 305 SLVRLELEGNQLTSVPAEIWQLTSLKWLNLGYNQLTSVPAEIGQLAALKELCLYGNQLTS 364

Query: 152 LRSSLVNGPTPALLKYLRSR-----LPENEDSEASTTKEDLITMATRLSVTSK------- 199
           + + +  G   AL K   SR     LP  E  + ++ +E  ++     SV ++       
Sbjct: 365 VPAEV--GRLSALRKLSLSRNRLTSLPA-EIGQLTSLRELRLSDNQLTSVPAEIGQLRAL 421

Query: 200 -ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
             L L G  L+++P+EI +   +  L L  N +  +P E+    SL+ L L+ N++   P
Sbjct: 422 KLLILLGNQLTSVPAEIGQLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLP 481

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
             I   L+SL    L  N L  VP++    +  L  LDL  N + S+P       L  L+
Sbjct: 482 AEI-GQLTSLVESLLGGNQLTSVPAE-IGQLTSLTHLDLVDNQLTSVPAE--VGRLTALR 537

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           EL + R  L   P +I RL  L+ L L +N L S+P     LTSL EL L+DN +++LP 
Sbjct: 538 ELNVSRNALTLLPAEIGRLTSLKGLYLDENELTSVPAEIGQLTSLQELWLNDNQLTSLPA 597

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
           E+GLL   L  LRL GN L S+   I
Sbjct: 598 EIGLL-IWLHILRLGGNQLTSMPAAI 622



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 184/363 (50%), Gaps = 19/363 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   T L +L    N L  +P  IG L+ L+RL+L  N++ S+P+ I    SL    +G 
Sbjct: 277 IGQLTSLRKLYLDHNKLTSVPVEIGQLTSLVRLELEGNQLTSVPAEIWQLTSLKWLNLGY 336

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+++PAE+G+L+ L  L L+ NQL     E  +L  L  L LS N L+ LP EIG++T
Sbjct: 337 NQLTSVPAEIGQLAALKELCLYGNQLTSVPAEVGRLSALRKLSLSRNRLTSLPAEIGQLT 396

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +LR+L L+ N L ++ + +       LL  L ++L        ++   ++  +A+ +   
Sbjct: 397 SLRELRLSDNQLTSVPAEIGQLRALKLLILLGNQL--------TSVPAEIGQLASLVG-- 446

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L L    L+ +P+EI +   +  L L+ N +  LP E+    SL   +L  N++   
Sbjct: 447 ---LHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAEIGQLTSLVESLLGGNQLTSV 503

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL-PENPPFSSLPHL 316
           P  I   L+SL+ L L +N L  VP++    +  L+ L++S N  +L P       L  L
Sbjct: 504 PAEI-GQLTSLTHLDLVDNQLTSVPAE-VGRLTALRELNVSRNALTLLPAE--IGRLTSL 559

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           + LYL   +L   P +I +L  L+ L L+ N L S+P     L  L  L L  N ++++P
Sbjct: 560 KGLYLDENELTSVPAEIGQLTSLQELWLNDNQLTSLPAEIGLLIWLHILRLGGNQLTSMP 619

Query: 377 PEL 379
             +
Sbjct: 620 AAI 622



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 153/344 (44%), Gaps = 63/344 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L EL    N L  +P  +G LS L +L L +NR+ S+P+ I    SL E  + +
Sbjct: 346 IGQLAALKELCLYGNQLTSVPAEVGRLSALRKLSLSRNRLTSLPAEIGQLTSLRELRLSD 405

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+++PAE+G+L  L  L L  NQL     E  QL  L  L L +N L+G+P EIG++T
Sbjct: 406 NQLTSVPAEIGQLRALKLLILLGNQLTSVPAEIGQLASLVGLHLRDNRLTGVPAEIGQLT 465

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +L  L L  N L +L         PA +  L S +                         
Sbjct: 466 SLEWLYLAENQLTSL---------PAEIGQLTSLV------------------------- 491

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             E  L G  L+++P+EI +   +T LDL  N +  +P E+    +L+ L +SRN +   
Sbjct: 492 --ESLLGGNQLTSVPAEIGQLTSLTHLDLVDNQLTSVPAEVGRLTALRELNVSRNALTLL 549

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P  I   L+SL  L LD N L  VP++                            L  LQ
Sbjct: 550 PAEI-GRLTSLKGLYLDENELTSVPAE-------------------------IGQLTSLQ 583

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
           EL+L   QL   P +I  L  L IL L  N L S+P   + L +
Sbjct: 584 ELWLNDNQLTSLPAEIGLLIWLHILRLGGNQLTSMPAAIRKLKA 627



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 81/149 (54%), Gaps = 2/149 (1%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N+LT L    I   T L E +   N L  +P  IG L+ L  LDL  N++ S+P+ +   
Sbjct: 475 NQLTSLPAE-IGQLTSLVESLLGGNQLTSVPAEIGQLTSLTHLDLVDNQLTSVPAEVGRL 533

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLS 127
            +L E  +  NAL+ LPAE+G+L+ L  L L  N+L     E  QL  L  L L++N L+
Sbjct: 534 TALRELNVSRNALTLLPAEIGRLTSLKGLYLDENELTSVPAEIGQLTSLQELWLNDNQLT 593

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            LP EIG +  L  L L GN L ++ +++
Sbjct: 594 SLPAEIGLLIWLHILRLGGNQLTSMPAAI 622



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L+V  N LT+L    I   T L  L   +N L  +P  IG L+ L  L L+ N++ S
Sbjct: 536 LRELNVSRNALTLLPAE-IGRLTSLKGLYLDENELTSVPAEIGQLTSLQELWLNDNQLTS 594

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 95
           +P+ I     L    +G N L+++PA + KL   G
Sbjct: 595 LPAEIGLLIWLHILRLGGNQLTSMPAAIRKLKAAG 629


>gi|395530453|ref|XP_003767309.1| PREDICTED: leucine-rich repeat-containing protein 40 [Sarcophilus
           harrisii]
          Length = 638

 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 139/454 (30%), Positives = 223/454 (49%), Gaps = 62/454 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N LT L  +  +S + L  L  + N +  +P  I  + RL  LD   N + +
Sbjct: 212 LEDLDLSNNHLTALPVSF-SSLSNLMRLNLASNQMKDLPVEITRMKRLKHLDCTSNYLQT 270

Query: 61  IPSSISG----------------------CCSLAEFYMGNNALSAL-PAELGKLSKLGTL 97
           +PS ++                       C  L E ++G N +  L P  L  L  +  L
Sbjct: 271 VPSELASMESLELLYLRRNKLRFLPEFPSCLLLKELHVGENQIEMLGPEHLRHLKSIHVL 330

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL  N+LK    E   L+ L  LDL+NN +S LP  +G +  L+ L L GNPLRT+R  L
Sbjct: 331 DLRDNKLKSIPDEITLLQALERLDLTNNDISSLPHTLGNLPRLQFLALEGNPLRTIRREL 390

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS------KELSLEGMNLSA 210
           +N  T  +LKYLRS++ ++  ++   + E  +T+ ++  V +      K L       + 
Sbjct: 391 LNKGTQEVLKYLRSKIKDDPVNQNEASIETAMTLPSQARVNAHTITALKLLDYSDKQTTL 450

Query: 211 IPSEIWEA---GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           IP EI++A     IT ++ S+N + E+P  +    ++  + L  NK+     A L  L +
Sbjct: 451 IPDEIFDAVGNNVITSVNFSKNHLNEIPKRIMELKAVCDINLGFNKL-SCVSAELGVLQN 509

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L+ L + NN L  +P +  + +  LQ ++LS+N                        + +
Sbjct: 510 LAHLDIRNNLLTSLPEE-MEALIKLQTINLSFN------------------------RFK 544

Query: 328 EAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
             P+ + R++ L  + LS N + S+ P   K +  L  LDL +N++  +PPELG    SL
Sbjct: 545 TFPSVLYRVRSLETILLSNNQVGSVDPLQLKQMDKLATLDLQNNDLLHIPPELGNCV-SL 603

Query: 387 QALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           +AL L+GNP R  R  IL +GT+AVL+YL+D+IP
Sbjct: 604 RALLLEGNPFRIPRAAILAKGTEAVLEYLRDRIP 637



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 109/309 (35%), Positives = 165/309 (53%), Gaps = 44/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L++LD+ +N L+ LP  IG++  L+KL ++ N L+TL         P  L  LR+     
Sbjct: 143 LTILDMHDNLLTSLPCAIGELENLQKLNVSHNKLKTL---------PQELTKLRNL---- 189

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                  K L L+   L+ +P    +  ++  LDLS N +  LP
Sbjct: 190 -----------------------KGLFLQYNELTCVPEGFGQLHKLEDLDLSNNHLTALP 226

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              SS ++L  L L+ N++KD P  I T +  L  L   +N L+ VPS+    +  L++L
Sbjct: 227 VSFSSLSNLMRLNLASNQMKDLPVEI-TRMKRLKHLDCTSNYLQTVPSE-LASMESLELL 284

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE-APTDILRLQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL++   Q+    P  +  L+ + +LDL  N L+SIP
Sbjct: 285 YLRRNKLRFLPE---FPSCLLLKELHVGENQIEMLGPEHLRHLKSIHVLDLRDNKLKSIP 341

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L +L  LDL++N+IS+LP  LG L P LQ L L+GNPLR+IRR +L++GT+ VLK
Sbjct: 342 DEITLLQALERLDLTNNDISSLPHTLGNL-PRLQFLALEGNPLRTIRRELLNKGTQEVLK 400

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 401 YLRSKIKDD 409



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 28/170 (16%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           LS +P  +W      +++L      +LP E     S        N  + W + I      
Sbjct: 84  LSEVPQTVW------RINL------DLPEEAKQNHSF-------NASERWWEQI-----D 119

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQELYLRRMQL 326
           L+ L + NN L+ + SD  + +P L ILD+  N+  SLP       L +LQ+L +   +L
Sbjct: 120 LTKLIISNNKLQSL-SDDLRLLPALTILDMHDNLLTSLP--CAIGELENLQKLNVSHNKL 176

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           +  P ++ +L+ L+ L L  N L  +PEGF  L  L +LDLS+N+++ALP
Sbjct: 177 KTLPQELTKLRNLKGLFLQYNELTCVPEGFGQLHKLEDLDLSNNHLTALP 226


>gi|291398713|ref|XP_002715973.1| PREDICTED: leucine rich repeat containing 40 [Oryctolagus
           cuniculus]
          Length = 602

 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 145/455 (31%), Positives = 227/455 (49%), Gaps = 64/455 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT +S    +S + L  +  S N L  +P  I  + +L  LD   N + S
Sbjct: 176 LEDLDLSNNRLTTISAGF-SSLSGLVRINLSSNHLKSLPAEISRMKKLRHLDCSSNLLES 234

Query: 61  IPSSISG----------------------CCSLAEFYMGNNALSALPAE-LGKLSKLGTL 97
           IP  ++G                      C  L E ++G N +  L A+ L  LS +  L
Sbjct: 235 IPPELAGMESLELLYLRRNKLRFLPEFPSCKLLKELHVGENQIEMLAADHLKHLSSILVL 294

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           +L  N+LK    E   L+ L  LDLSNN +S LP  +G +  L+ L L GNPLRT+R  +
Sbjct: 295 ELRDNKLKSVPDEISLLQSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIRREI 353

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT------RLSVTSKELSLEGMNLSA 210
           +N  T  +LKYLRS++ ++  S++ +  E  +T+ +         VT K L       + 
Sbjct: 354 INKGTQEVLKYLRSKIKDDGPSQSDSVTETAMTLPSESKVNVHAIVTLKLLDYSDKQTTL 413

Query: 211 IPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLS 266
           IP E+++A +   I  ++ S+N + E+P  ++    + T + LS NK+       L  L 
Sbjct: 414 IPDEVFDAIKNNIIISVNFSKNQLSEIPKRITELKEMVTEVNLSFNKL-SCISLELCMLQ 472

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
            L+ L L +N L  +P +  K +  LQ+++LS+N         F  LP +         L
Sbjct: 473 KLTFLDLRSNFLNSLPEE-MKSLIRLQVINLSFN--------RFKILPEV---------L 514

Query: 327 REAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
              PT       L  + +S N + S+ P+  K + +LT LDL +N++  +PPELG    +
Sbjct: 515 YHIPT-------LETILISNNQVGSVDPQKMKTMENLTTLDLQNNDLLQIPPELGNC-VN 566

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           L+ L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 157/309 (50%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  I ++  L+KL ++ N L+ L   + N      L+ L+S     
Sbjct: 107 LTVLDIHDNQLTTLPSAIRELENLQKLNVSHNKLKILPEEITN------LRNLKS----- 155

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                    L L+   L+ IP    +   +  LDLS N +  + 
Sbjct: 156 -------------------------LYLQHNELAVIPEGFEQLSSLEDLDLSNNRLTTIS 190

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              SS + L  + LS N +K  P A ++ +  L  L   +N L  +P +    +  L++L
Sbjct: 191 AGFSSLSGLVRINLSSNHLKSLP-AEISRMKKLRHLDCSSNLLESIPPE-LAGMESLELL 248

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL++   Q+     D L+ L  + +L+L  N L+S+P
Sbjct: 249 YLRRNKLRFLPE---FPSCKLLKELHVGENQIEMLAADHLKHLSSILVLELRDNKLKSVP 305

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+++GT+ VLK
Sbjct: 306 DEISLLQSLERLDLSNNDISSLPYSLGNLH--LKFLALEGNPLRTIRREIINKGTQEVLK 363

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 364 YLRSKIKDD 372



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 169/381 (44%), Gaps = 64/381 (16%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ ++PS+I    +L +  + +N
Sbjct: 79  WEQTDLTKLIISNNKLQSLADDLRLLPALTVLDIHDNQLTTLPSAIRELENLQKLNVSHN 138

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 138
            L  LP E+  L  L +L L  N+L        QL  L  LDLSNN L+ +      ++ 
Sbjct: 139 KLKILPEEITNLRNLKSLYLQHNELAVIPEGFEQLSSLEDLDLSNNRLTTISAGFSSLSG 198

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L ++ L+ N L++L + +      + +K LR                             
Sbjct: 199 LVRINLSSNHLKSLPAEI------SRMKKLR----------------------------- 223

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
             L      L +IP E+     +  L L RN ++ L PE  SC  L+ L +  N+I+   
Sbjct: 224 -HLDCSSNLLESIPPELAGMESLELLYLRRNKLRFL-PEFPSCKLLKELHVGENQIEMLA 281

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
              L  LSS+  L+L +N L+ VP D    +  L+ LDLS N I+SLP +    +L HL+
Sbjct: 282 ADHLKHLSSILVLELRDNKLKSVP-DEISLLQSLERLDLSNNDISSLPYS--LGNL-HLK 337

Query: 318 ELYL--------RRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-----------GFKN 358
            L L        RR  + +   ++L+  + +I D   +   S+ E               
Sbjct: 338 FLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSDSVTETAMTLPSESKVNVHA 397

Query: 359 LTSLTELDLSDNNISALPPEL 379
           + +L  LD SD   + +P E+
Sbjct: 398 IVTLKLLDYSDKQTTLIPDEV 418



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 110/207 (53%), Gaps = 14/207 (6%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT----LILSRNK 253
           S +L+L G NLS +P  +W       +D+   + Q L    S     QT    LI+S NK
Sbjct: 38  SGQLNLSGRNLSEVPQCVWRIN----VDVPEEANQNLSFSTSERWWEQTDLTKLIISNNK 93

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 312
           ++   D  L  L +L+ L + +N L  +PS   +++  LQ L++S+N +  LPE    ++
Sbjct: 94  LQSLADD-LRLLPALTVLDIHDNQLTTLPS-AIRELENLQKLNVSHNKLKILPEE--ITN 149

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L +L+ LYL+  +L   P    +L  L  LDLS N L +I  GF +L+ L  ++LS N++
Sbjct: 150 LRNLKSLYLQHNELAVIPEGFEQLSSLEDLDLSNNRLTTISAGFSSLSGLVRINLSSNHL 209

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            +LP E+  ++  L+ L    N L SI
Sbjct: 210 KSLPAEISRMK-KLRHLDCSSNLLESI 235


>gi|418755315|ref|ZP_13311522.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964326|gb|EKO32216.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 511

 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 133/390 (34%), Positives = 191/390 (48%), Gaps = 24/390 (6%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           + +   L EL    N L  +P  IG L  L  L+LH NR+ S+P  I     L   Y+G 
Sbjct: 103 VGTLQNLRELNLENNQLATLPNGIGQLENLQALNLHNNRLKSLPKEIGKLQKLERLYLGG 162

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP E+G L  L  L L  +QLK +  E  +LR L  L L +N L  L  EIGK+ 
Sbjct: 163 NQLRTLPQEIGTLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLR 222

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +L +L+L  N L TL + +  G    L              E + +   L+T+   +   
Sbjct: 223 SLERLILENNQLATLPNEI--GKLQNL-------------EELNLSNNQLVTLPQEIGAL 267

Query: 198 S--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              + L L       +P +IW+   +  L L+ N +  LP E+    +LQ+LIL+RN++K
Sbjct: 268 ENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGQLENLQSLILARNQLK 327

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             P  I   L  L  L L NN L  +P +    +  L+ L L  N + +LP+      L 
Sbjct: 328 SLPKEI-GKLQKLKWLILANNQLTVLPQE-IGQLEKLEDLYLEDNQLTTLPK--EIWKLE 383

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
            L+ L L   QLR  P +I +LQ+L  LDLS N L+ +P+    L  L  LDLS+N ++ 
Sbjct: 384 KLKYLDLANNQLRLLPEEIGKLQKLEYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLAT 443

Query: 375 LPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
           LP E+G LE  L+ L L GNP  +  + I+
Sbjct: 444 LPKEIGKLE-KLEDLDLSGNPFTTFPKEIV 472



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 165/346 (47%), Gaps = 20/346 (5%)

Query: 41  TIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 99
               L    + D   N++   + +++     +   ++  + L  L  E+G L  L  L+L
Sbjct: 9   VFAILCFFYKCDAEDNKVYRDLDAALKNPMDVKSLHLNRDQLRTLSQEVGTLQNLRELNL 68

Query: 100 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
            +NQL     E  QL  L VL L NN L  LP E+G +  LR+L L  N L TL + +  
Sbjct: 69  ENNQLATLPNEIGQLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQ 128

Query: 159 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 218
                 L    +RL        S  KE  I    +L    + L L G  L  +P EI   
Sbjct: 129 LENLQALNLHNNRL-------KSLPKE--IGKLQKL----ERLYLGGNQLRTLPQEIGTL 175

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
            ++ +L LSR+ ++  P E+    SL+ LIL  N++      I   L SL  L L+NN L
Sbjct: 176 QDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEI-GKLRSLERLILENNQL 234

Query: 279 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
             +P++  K +  L+ L+LS N + +LP+     +L +LQ L+L   Q R  P  I +LQ
Sbjct: 235 ATLPNEIGK-LQNLEELNLSNNQLVTLPQ--EIGALENLQNLHLYSNQFRTLPKQIWQLQ 291

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            L+ L L+ N L  +P+    L +L  L L+ N + +LP E+G L+
Sbjct: 292 NLQDLHLAHNQLTVLPQEIGQLENLQSLILARNQLKSLPKEIGKLQ 337



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 116/252 (46%), Gaps = 18/252 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +E N+L  L N  I     L EL  S N L  +P+ IG+L  L  L L+ N+  +
Sbjct: 224 LERLILENNQLATLPNE-IGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRT 282

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I    +L + ++ +N L+ LP E+G+L  L +L L  NQLK    E  +L +L  L
Sbjct: 283 LPKQIWQLQNLQDLHLAHNQLTVLPQEIGQLENLQSLILARNQLKSLPKEIGKLQKLKWL 342

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR------SRLP 173
            L+NN L+ LP EIG++  L  L L  N L TL   +        LKYL         LP
Sbjct: 343 ILANNQLTVLPQEIGQLEKLEDLYLEDNQLTTLPKEIWKLEK---LKYLDLANNQLRLLP 399

Query: 174 ENEDSEASTTKEDLITMATRLSVTS-------KELSLEGMNLSAIPSEIWEAGEITKLDL 226
           E           DL     RL           K L L    L+ +P EI +  ++  LDL
Sbjct: 400 EEIGKLQKLEYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIGKLEKLEDLDL 459

Query: 227 SRNSIQELPPEL 238
           S N     P E+
Sbjct: 460 SGNPFTTFPKEI 471


>gi|114557142|ref|XP_513483.2| PREDICTED: leucine-rich repeat-containing protein 40 [Pan
           troglodytes]
 gi|410217710|gb|JAA06074.1| leucine rich repeat containing 40 [Pan troglodytes]
 gi|410257504|gb|JAA16719.1| leucine rich repeat containing 40 [Pan troglodytes]
 gi|410300344|gb|JAA28772.1| leucine rich repeat containing 40 [Pan troglodytes]
 gi|410331221|gb|JAA34557.1| leucine rich repeat containing 40 [Pan troglodytes]
          Length = 602

 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 145/455 (31%), Positives = 231/455 (50%), Gaps = 64/455 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N LT +  +  +S + L  L  S N L  +P  I  + RL  LD + N + +
Sbjct: 176 LEDLDLSNNHLTTVPASF-SSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLET 234

Query: 61  IPSSISG----------------------CCSLAEFYMGNNALSALPAE-LGKLSKLGTL 97
           IP  ++G                      C  L E ++G N +  L AE L  L+ +  L
Sbjct: 235 IPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVL 294

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL  N+LK    E   L+ L  LDLSNN +S LP  +G +  L+ L L GNPLRT+R  +
Sbjct: 295 DLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIRREI 353

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMNLSA 210
           ++  T  +LKYLRS++ ++  S++ +  E  +T+   +R+++    T K L       + 
Sbjct: 354 ISKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATL 413

Query: 211 IPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLS 266
           IP E+++A +   IT ++ S+N + E+P  +     + + + LS NK+  +    L  L 
Sbjct: 414 IPDEVFDAVKSNIITSINFSKNQLCEIPKRMVELKEMVSDVDLSFNKLS-FISLELCVLQ 472

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
            L+ L L NN L  +P +  + +  LQ ++LS+N         F  LP +  LY      
Sbjct: 473 KLTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN--------RFKMLPEV--LY------ 515

Query: 327 REAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
                   R+  L  + +S N + S+ P+  K + +LT LDL +N++  +PPELG    +
Sbjct: 516 --------RIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNC-VN 566

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           L+ L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 157/309 (50%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  I ++  L+KL ++ N L+ L   + N      L+ L+      
Sbjct: 107 LTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITN------LRNLKC----- 155

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                    L L+   L+ I     +   +  LDLS N +  +P
Sbjct: 156 -------------------------LYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVP 190

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              SS +SL  L LS N++K  P A +  +  L  L  ++N L  +P +    +  L++L
Sbjct: 191 ASFSSLSSLVRLNLSSNELKSLP-AEINRMKRLKHLDCNSNLLETIPPE-LAGMESLELL 248

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL++   Q+     + L+ L  + +LDL  N L+S+P
Sbjct: 249 YLRRNKLRFLPE---FPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP 305

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+ +GT+ VLK
Sbjct: 306 DEIILLQSLERLDLSNNDISSLPYSLGNLH--LKFLALEGNPLRTIRREIISKGTQEVLK 363

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 364 YLRSKIKDD 372



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 146/320 (45%), Gaps = 54/320 (16%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +L +  + +N
Sbjct: 79  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN 138

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV---LDLSNNSLSGLPPEIGKM 136
            L  LP E+  L  L  L L  N+L   C+     +LS    LDLSNN L+ +P     +
Sbjct: 139 KLKILPEEITNLRNLKCLYLQHNELT--CISEGFEQLSNLEDLDLSNNHLTTVPASFSSL 196

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           ++L +L L+ N L++L         PA +  ++ RL                        
Sbjct: 197 SSLVRLNLSSNELKSL---------PAEINRMK-RL------------------------ 222

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K L      L  IP E+     +  L L RN ++ L PE  SC+ L+ L +  N+I+ 
Sbjct: 223 --KHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL-PEFPSCSLLKELHVGENQIEM 279

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH- 315
                L  L+S+  L L +N L+ VP D    +  L+ LDLS N          SSLP+ 
Sbjct: 280 LEAEHLKHLNSILVLDLRDNKLKSVP-DEIILLQSLERLDLSNN--------DISSLPYS 330

Query: 316 LQELYLRRMQLREAPTDILR 335
           L  L+L+ + L   P   +R
Sbjct: 331 LGNLHLKFLALEGNPLRTIR 350


>gi|427738478|ref|YP_007058022.1| hypothetical protein Riv7116_5077 [Rivularia sp. PCC 7116]
 gi|427373519|gb|AFY57475.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 982

 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 160/478 (33%), Positives = 229/478 (47%), Gaps = 61/478 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++LD+  NKLT L    I   T L  L    N L+ +P  IG L+ L  L L  N++ S
Sbjct: 409 VTELDLSANKLTALPPG-IGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSS 467

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I    +L   Y+ NN LS+LPAE+G+L+ L +L L +N+L     E  QL  L   
Sbjct: 468 LPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSF 527

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENE 176
            L N  LS LP EIG++T L+   L    L +L +    L N  +  L   L S LP N 
Sbjct: 528 YLYNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPAN- 586

Query: 177 DSEASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLS 227
                T  + L   + +LS+   E         L L    LS++P+EI +   +  L L 
Sbjct: 587 -IFQLTNLQSLYLSSNQLSILQAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLF 645

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAI----------------------LTSL 265
            N +  LP E+    +LQTL L  NK+   P  I                      +  L
Sbjct: 646 NNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQL 705

Query: 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE--------------NPPF 310
           ++L  L LDNN L  +P++    +  LQ L L  N ++SLP               N   
Sbjct: 706 TNLQTLYLDNNQLSSLPAE-IGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSLYLFNNQL 764

Query: 311 SSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
           SSLP       +LQ LYL   QL   P +I +L  L+ L L  N L S+P G   LT+L 
Sbjct: 765 SSLPAEIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPPGIGQLTNLQ 824

Query: 364 ELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
            L L +N +++LP E+G L  SL+ L LDGNPL+S+   I  + +KA+L + K ++ +
Sbjct: 825 TLYLDNNQLNSLPTEIGRLNSSLKNLLLDGNPLKSLPPEIQYQNSKAILNFYKQQLEQ 882



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 134/380 (35%), Positives = 192/380 (50%), Gaps = 23/380 (6%)

Query: 36  NGMPETIG--SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 93
           NG  E I   SL  +  LDL  N++ ++P  I    +L   Y+ NN LS+LPAE+G+L+ 
Sbjct: 395 NGYGEYIAPQSLEEVTELDLSANKLTALPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLTN 454

Query: 94  LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L +L L +N+L     E  QL  L  L L NN LS LP EIG++T L+ L L  N L +L
Sbjct: 455 LQSLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSL 514

Query: 153 RS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS------- 202
            +    L N  +  L   L S LP   +    T  +      T LS    E+        
Sbjct: 515 PAEIGQLTNLQSFYLYNTLLSSLP--AEIGQLTNLQSFYLDNTLLSSLPAEIGQLTNLQS 572

Query: 203 --LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
             L+   LS++P+ I++   +  L LS N +  L  E+    +LQ+L L  NK+   P A
Sbjct: 573 FYLDNTLLSSLPANIFQLTNLQSLYLSSNQLSILQAEIGQLTNLQSLYLFNNKLSSLP-A 631

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
            +  L++L  L L NN L  +P++    +  LQ L L  N ++SLP       L +LQ L
Sbjct: 632 EIGQLTNLQTLYLFNNKLSSLPAE-IGQLTNLQTLYLFNNKLSSLP--AEIGQLTNLQTL 688

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
           YL   +L   P +I +L  L+ L L  N L S+P     LT+L  L L +N +S+LP E+
Sbjct: 689 YLFNNKLSSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEI 748

Query: 380 GLLEPSLQALRLDGNPLRSI 399
           G L  +LQ+L L  N L S+
Sbjct: 749 GQL-TNLQSLYLFNNQLSSL 767



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 91/185 (49%), Gaps = 25/185 (13%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   T L  L    N L+ +P  IG L+ L  L L  N++ S+P+ I    +L   Y+ N
Sbjct: 702 IGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSLYLFN 761

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N LS+LPAE+G+L+ L +L L +NQL     E  QL  L  L L NN LS LPP IG++T
Sbjct: 762 NQLSSLPAEIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPPGIGQLT 821

Query: 138 TLRKLLLT------------------------GNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            L+ L L                         GNPL++L   +    + A+L + + +L 
Sbjct: 822 NLQTLYLDNNQLNSLPTEIGRLNSSLKNLLLDGNPLKSLPPEIQYQNSKAILNFYKQQLE 881

Query: 174 ENEDS 178
           +  D+
Sbjct: 882 QTIDN 886


>gi|159464078|ref|XP_001690269.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158284257|gb|EDP10007.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 523

 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 162/484 (33%), Positives = 235/484 (48%), Gaps = 81/484 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI-- 58
           M K+D+  N +T L   L    T LT L  S N L  +PET+  L  L  LD+  NRI  
Sbjct: 56  MYKVDLSRNAITSLPPEL-GVLTTLTHLDVSHNQLAALPETLSMLVGLKLLDVSNNRIEE 114

Query: 59  --------------------LSI-PSSISG--CCSLAEFYMGNNALSALPAELGKLSKLG 95
                               LS+ P  + G    +LA     +N L  LP  L + + L 
Sbjct: 115 LPASLAALPALAALHAGKNALSLLPPGVGGRQQPALALLSAPDNRLVELPPGLSEAASLT 174

Query: 96  TLDLHSNQLKE---YCVEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRT 151
            LDL  N L E   Y +      L+ +DLS N L G L  E+G +  +R L L  N L +
Sbjct: 175 KLDLSGNALAELPGYILPGLS-SLTDVDLSRNRLRGELGREVGLLRRVRTLNLRDNRLTS 233

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
           L  ++       L++    R      ++ S+   +L   A       + L L    L+ I
Sbjct: 234 LPPTVAG--CSGLVELFLGR------NQLSSVPPELGMCAGL-----RTLELRDNKLTGI 280

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD--------------- 256
           P+E+ E  ++  LDLS N ++ LPPEL S +SL++L L  N +K                
Sbjct: 281 PAELCEL-QLGLLDLSNNDLRSLPPELGSMSSLRSLPLDGNPLKSIRREVPLLPPEGLAR 339

Query: 257 ----------------WP-DAILTSLSSLSCLKLDNNP-LRQVPSDGFKDIPMLQILDLS 298
                           WP  A+   L +L  L++ NNP LRQ+P   F   P L  L+L+
Sbjct: 340 LPGLRGLHLNAMGLSAWPLPALNGVLPNLHELQVCNNPPLRQLPPYPFMACPNLVRLELA 399

Query: 299 Y--NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
               + +LP    F+ L  L+ L L +  +   P ++L+  +LR+L+L+ N L+ +P   
Sbjct: 400 GIPGVCTLPPGT-FAVLTALEALDLSQTGIGIFPPELLQAPRLRLLNLASNRLEVLPAEV 458

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
             +  L EL+L++NN++ LPP+LGLL P L++L L+GNPLRSIRR IL+RGT AVL YLK
Sbjct: 459 AAMARLEELNLANNNLATLPPQLGLLAPVLRSLGLEGNPLRSIRRPILERGTPAVLAYLK 518

Query: 417 DKIP 420
           D+IP
Sbjct: 519 DRIP 522



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 128/316 (40%), Gaps = 113/316 (35%)

Query: 197 TSKELSLEGMNLSAIPSEI--------------WEAGEITKLDLSRNSIQELPPELSSCA 242
           +S  L+L G  L+ +PS +              WE  E+ K+DLSRN+I  LPPEL    
Sbjct: 18  SSGTLTLTGRGLTQVPSAVYNLEEQLPGHDAKWWEVAEMYKVDLSRNAITSLPPELGVLT 77

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV--------------------- 281
           +L  L +S N++   P+  L+ L  L  L + NN + ++                     
Sbjct: 78  TLTHLDVSHNQLAALPET-LSMLVGLKLLDVSNNRIEELPASLAALPALAALHAGKNALS 136

Query: 282 ---PSDGFKDIPMLQI-----------------------LDLSYN-IASLPEN--PPFSS 312
              P  G +  P L +                       LDLS N +A LP    P  SS
Sbjct: 137 LLPPGVGGRQQPALALLSAPDNRLVELPPGLSEAASLTKLDLSGNALAELPGYILPGLSS 196

Query: 313 LPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
              L ++ L R +LR E   ++  L+++R L+L  N L S+P      + L EL L  N 
Sbjct: 197 ---LTDVDLSRNRLRGELGREVGLLRRVRTLNLRDNRLTSLPPTVAGCSGLVELFLGRNQ 253

Query: 372 ISALPPELGL--------------------------------------LEP------SLQ 387
           +S++PPELG+                                      L P      SL+
Sbjct: 254 LSSVPPELGMCAGLRTLELRDNKLTGIPAELCELQLGLLDLSNNDLRSLPPELGSMSSLR 313

Query: 388 ALRLDGNPLRSIRRTI 403
           +L LDGNPL+SIRR +
Sbjct: 314 SLPLDGNPLKSIRREV 329


>gi|403257782|ref|XP_003921473.1| PREDICTED: leucine-rich repeat-containing protein 40 [Saimiri
           boliviensis boliviensis]
          Length = 615

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 146/455 (32%), Positives = 229/455 (50%), Gaps = 64/455 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT +  +  +S + L  L  S N L  +P  I  + RL  LD + N + +
Sbjct: 189 LEDLDLSNNRLTTVPASF-SSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLET 247

Query: 61  IPSSISG----------------------CCSLAEFYMGNNALSALPAE-LGKLSKLGTL 97
           IP  ++G                      C  L E ++G N +  L AE L  L+ +  L
Sbjct: 248 IPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVL 307

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL  N+LK    E   L  L  LDLSNN +S LP  +G +  L+ L L GNPLRT+R  +
Sbjct: 308 DLRDNKLKSVPDEIILLHSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIRREI 366

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMNLSA 210
           +N  T  +LKYLRS++ ++  S+  +  E  +T+   +R+++    T K L       + 
Sbjct: 367 INKGTQEVLKYLRSKIKDDGPSQRDSATETAMTLPSESRVNIHAIITLKMLDYSDKQATL 426

Query: 211 IPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLS 266
           IP E+++A +   IT ++ S+N + E+P  +     + + + LS NK+       L  L 
Sbjct: 427 IPDEVFDAVKSNIITSVNFSKNQLCEIPKRMVELKEMVSDVNLSFNKLSSI-SLELCMLQ 485

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
            L+ L L NN L  +P +  + +  LQ ++LS+N         F  LP +  LY      
Sbjct: 486 KLTFLDLRNNFLNSLPEE-MELLVRLQTINLSFN--------RFKMLPEV--LY------ 528

Query: 327 REAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
                   R+  L  + +S N + S+ P+  K + +LT LDL +N++  +PPELG    +
Sbjct: 529 --------RIFTLETILISNNQVGSMDPQKMKMMENLTTLDLQNNDLLQIPPELGNC-VN 579

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           L+ L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 580 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 614



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 157/309 (50%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  I ++  L+KL ++ N L+ L   + N      L+ L+      
Sbjct: 120 LTVLDIHDNQLTSLPSAIRELANLQKLNISHNKLKILPEEITN------LRNLKC----- 168

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                    L L+   L  I     +   +  LDLS N +  +P
Sbjct: 169 -------------------------LYLQHNELICISEGFEQLSNLEDLDLSNNRLTTVP 203

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              SS +SL  L LS N++K  P A +  +  L  L  ++N L  +P +    +  L++L
Sbjct: 204 ASFSSLSSLVRLNLSSNQLKSLP-AEINRMKRLKHLDCNSNLLETIPPE-LAGMESLELL 261

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL++   Q+     + L+ L  + +LDL  N L+S+P
Sbjct: 262 YLRRNKLRFLPE---FPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP 318

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+++GT+ VLK
Sbjct: 319 DEIILLHSLERLDLSNNDISSLPYSLGNLH--LKFLALEGNPLRTIRREIINKGTQEVLK 376

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 377 YLRSKIKDD 385



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 146/320 (45%), Gaps = 54/320 (16%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +L +  + +N
Sbjct: 92  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELANLQKLNISHN 151

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV---LDLSNNSLSGLPPEIGKM 136
            L  LP E+  L  L  L L  N+L   C+     +LS    LDLSNN L+ +P     +
Sbjct: 152 KLKILPEEITNLRNLKCLYLQHNEL--ICISEGFEQLSNLEDLDLSNNRLTTVPASFSSL 209

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           ++L +L L+ N L++L         PA +  ++ RL                        
Sbjct: 210 SSLVRLNLSSNQLKSL---------PAEINRMK-RL------------------------ 235

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K L      L  IP E+     +  L L RN ++ L PE  SC+ L+ L +  N+I+ 
Sbjct: 236 --KHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL-PEFPSCSLLKELHVGENQIEM 292

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH- 315
                L  L+S+  L L +N L+ VP D    +  L+ LDLS N          SSLP+ 
Sbjct: 293 LEAEHLKHLNSILVLDLRDNKLKSVP-DEIILLHSLERLDLSNN--------DISSLPYS 343

Query: 316 LQELYLRRMQLREAPTDILR 335
           L  L+L+ + L   P   +R
Sbjct: 344 LGNLHLKFLALEGNPLRTIR 363


>gi|426329995|ref|XP_004026013.1| PREDICTED: leucine-rich repeat-containing protein 40 [Gorilla
           gorilla gorilla]
          Length = 602

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 147/455 (32%), Positives = 231/455 (50%), Gaps = 64/455 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N LT +  +  +S + L  L  S N L  +P  I  + RL  LD + N + +
Sbjct: 176 LEDLDLSNNHLTTVPASF-SSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLET 234

Query: 61  IPSSISG----------------------CCSLAEFYMGNNALSALPAE-LGKLSKLGTL 97
           IP  ++G                      C  L E ++G N +  L AE L  L+ +  L
Sbjct: 235 IPPELAGMESLELLYLWRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVL 294

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL  N+LK    E   L+ L  LDLSNN +S LP  +G +  L+ L L GNPLRT+R  +
Sbjct: 295 DLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIRREI 353

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMNLSA 210
           ++  T  +LKYLRS++ ++  S++ +  E  +T+   +R+++    T K L       + 
Sbjct: 354 LSKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATL 413

Query: 211 IPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLS 266
           IP E+++A +   IT ++ S+N + E+P  +     + + + LS NK+  +    L  L 
Sbjct: 414 IPDEVFDAVKSNIITSVNFSKNQLCEIPKRMVELKEMVSDVDLSFNKLS-FISLELCVLQ 472

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
            L+ L L NN L  +P +  K +  LQ ++LS+N         F  LP +  LY      
Sbjct: 473 KLTFLDLRNNFLNSLPEE-MKSLVRLQTINLSFN--------RFKMLPEV--LY------ 515

Query: 327 REAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
                 I  L+ + I   S N + S+ P+  K + +LT LDL +N++  +PPELG    +
Sbjct: 516 -----HIFTLETILI---SNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNC-VN 566

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           L+ L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 158/309 (51%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  I ++  L+KL ++ N L+TL   + N      L+ L+      
Sbjct: 107 LTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKTLPEEITN------LRNLKC----- 155

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                    L L+   L+ I     +   +  LDLS N +  +P
Sbjct: 156 -------------------------LYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVP 190

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              SS +SL  L LS N++K  P A +  +  L  L  ++N L  +P +    +  L++L
Sbjct: 191 ASFSSLSSLVRLNLSSNELKSLP-AEINRMKRLKHLDCNSNLLETIPPE-LAGMESLELL 248

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL++   Q+     + L+ L  + +LDL  N L+S+P
Sbjct: 249 YLWRNKLRFLPE---FPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP 305

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR IL +GT+ VLK
Sbjct: 306 DEIILLQSLERLDLSNNDISSLPYSLGNLH--LKFLALEGNPLRTIRREILSKGTQEVLK 363

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 364 YLRSKIKDD 372



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 145/317 (45%), Gaps = 52/317 (16%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +L +  + +N L 
Sbjct: 82  TDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLK 141

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV---LDLSNNSLSGLPPEIGKMTTL 139
            LP E+  L  L  L L  N+L   C+     +LS    LDLSNN L+ +P     +++L
Sbjct: 142 TLPEEITNLRNLKCLYLQHNELT--CISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSL 199

Query: 140 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 199
            +L L+ N L++L         PA +  ++ RL                          K
Sbjct: 200 VRLNLSSNELKSL---------PAEINRMK-RL--------------------------K 223

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
            L      L  IP E+     +  L L RN ++ L PE  SC+ L+ L +  N+I+    
Sbjct: 224 HLDCNSNLLETIPPELAGMESLELLYLWRNKLRFL-PEFPSCSLLKELHVGENQIEMLEA 282

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH-LQE 318
             L  L+S+  L L +N L+ VP D    +  L+ LDLS N          SSLP+ L  
Sbjct: 283 EHLKHLNSILVLDLRDNKLKSVP-DEIILLQSLERLDLSNN--------DISSLPYSLGN 333

Query: 319 LYLRRMQLREAPTDILR 335
           L+L+ + L   P   +R
Sbjct: 334 LHLKFLALEGNPLRTIR 350


>gi|426215732|ref|XP_004002123.1| PREDICTED: leucine-rich repeat-containing protein 40 [Ovis aries]
          Length = 602

 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 144/458 (31%), Positives = 232/458 (50%), Gaps = 70/458 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQNR 57
           +  LD+  N+LT +     AS++ L+ L+    S N L  +P  +  + RL  LD + N 
Sbjct: 176 LEDLDLSNNRLTTVP----ASFSFLSSLVRLNLSSNQLKSLPAELSGMKRLKHLDCNSNL 231

Query: 58  ILSIPSSISG----------------------CCSLAEFYMGNNALSALPAE-LGKLSKL 94
           + +IP  ++                       C  L E ++G N +  L AE L  L+ +
Sbjct: 232 LETIPPELASMESLELLYLRRNKLRFLPEFPSCKLLKELHVGENQIEKLGAEHLKHLNSI 291

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDL  N+LK    E   L+ L  LDLSNN +S LP  +G++  L+ L L GNPLRT+R
Sbjct: 292 LVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGRLH-LKFLALEGNPLRTIR 350

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMN 207
             ++N  T  +LKYLRS++ ++  S+  +  E  +T+   +R++V    T K L      
Sbjct: 351 REIINKGTQEVLKYLRSKIKDDGPSQNDSVTETAMTLPSESRVNVHTILTLKMLDYSDKQ 410

Query: 208 LSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILT 263
            + IP E+++A +   IT ++ S+N + E+P  +     + + + LS NK+      + T
Sbjct: 411 TALIPDEVFDAVKSNIITSINFSKNQLCEIPKRIVELKEMVSDVNLSYNKLSSISLELCT 470

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            L  L+ L L NN L  +P +  + +  LQ ++LS+N         F  LP +  LY   
Sbjct: 471 -LQKLTFLDLRNNFLNSLPEE-MESLTRLQTINLSFN--------RFKILPEV--LY--- 515

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLL 382
                      R+  L  + +S N + ++ P+  K + +L  LDL +N++  +PPELG  
Sbjct: 516 -----------RIPTLETVLISNNQVGALDPQKMKTMENLITLDLQNNDLLQIPPELGNC 564

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
             +L+ L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 565 -VNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 160/309 (51%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  I ++  L+KL ++ N L+ L   + N      L+ L       
Sbjct: 107 LTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITN------LRNL------- 153

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                  K L L+   L+ IP    +   +  LDLS N +  +P
Sbjct: 154 -----------------------KGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLTTVP 190

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              S  +SL  L LS N++K  P A L+ +  L  L  ++N L  +P +    +  L++L
Sbjct: 191 ASFSFLSSLVRLNLSSNQLKSLP-AELSGMKRLKHLDCNSNLLETIPPE-LASMESLELL 248

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL++   Q+ +   + L+ L  + +LDL  N L+S+P
Sbjct: 249 YLRRNKLRFLPE---FPSCKLLKELHVGENQIEKLGAEHLKHLNSILVLDLRDNKLKSVP 305

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+++GT+ VLK
Sbjct: 306 DEITLLQSLERLDLSNNDISSLPCSLGRLH--LKFLALEGNPLRTIRREIINKGTQEVLK 363

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 364 YLRSKIKDD 372



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 171/394 (43%), Gaps = 73/394 (18%)

Query: 14  LSNNLIASW---TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 70
           LS N    W   T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +
Sbjct: 70  LSFNASERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELEN 129

Query: 71  LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV---LDLSNNSLS 127
           L +  + +N L  LP E+  L  L  L L  N+L   C+     +LS    LDLSNN L+
Sbjct: 130 LQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELT--CIPEGFEQLSNLEDLDLSNNRLT 187

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            +P     +++L +L L+ N L++L         PA L  ++ RL               
Sbjct: 188 TVPASFSFLSSLVRLNLSSNQLKSL---------PAELSGMK-RL--------------- 222

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
                      K L      L  IP E+     +  L L RN ++ L PE  SC  L+ L
Sbjct: 223 -----------KHLDCNSNLLETIPPELASMESLELLYLRRNKLRFL-PEFPSCKLLKEL 270

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            +  N+I+      L  L+S+  L L +N L+ VP D    +  L+ LDLS N I+SLP 
Sbjct: 271 HVGENQIEKLGAEHLKHLNSILVLDLRDNKLKSVP-DEITLLQSLERLDLSNNDISSLP- 328

Query: 307 NPPFSSLPHLQELYL----------RRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-- 354
                SL  L   +L          RR  + +   ++L+  + +I D   +   S+ E  
Sbjct: 329 ----CSLGRLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQNDSVTETA 384

Query: 355 ---------GFKNLTSLTELDLSDNNISALPPEL 379
                        + +L  LD SD   + +P E+
Sbjct: 385 MTLPSESRVNVHTILTLKMLDYSDKQTALIPDEV 418



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 29/203 (14%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S +L+L G NLS +P  +W       +D+   + Q L               S N  + W
Sbjct: 38  SGQLNLSGRNLSEVPQCVWRIN----VDIPEEANQNL---------------SFNASERW 78

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
            +      + L+ L + NN L+ + +D  + +P L +LD+  N + SLP       L +L
Sbjct: 79  WEQ-----TDLTKLIISNNKLQSL-TDDLRLLPALTVLDIHDNQLTSLPS--AIRELENL 130

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           Q+L +   +L+  P +I  L+ L+ L L  N L  IPEGF+ L++L +LDLS+N ++ +P
Sbjct: 131 QKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLTTVP 190

Query: 377 PELGLLEPSLQALRLDGNPLRSI 399
                L  SL  L L  N L+S+
Sbjct: 191 ASFSFLS-SLVRLNLSSNQLKSL 212


>gi|186686076|ref|YP_001869272.1| Miro domain-containing protein [Nostoc punctiforme PCC 73102]
 gi|186468528|gb|ACC84329.1| Miro domain protein [Nostoc punctiforme PCC 73102]
          Length = 1109

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 145/401 (36%), Positives = 201/401 (50%), Gaps = 44/401 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++LD+    LT+L    I   T L  L    N L+ +P  IG L+ L  L L  N++ S
Sbjct: 18  VTELDLSYKGLTILPPE-IGQLTNLQTLHLDSNQLSSLPPKIGQLTNLQTLHLRSNQLSS 76

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I    +L   ++GNN LS+LP E+G+L+ L +L L  NQL     E  QL  L  L
Sbjct: 77  LPPEIGQLTNLQTLHLGNNQLSSLPPEIGQLTNLQSLHLWINQLSSLPPEIGQLTNLQSL 136

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL +N LS LPPE G++T L+ L L  N L +L                    PE     
Sbjct: 137 DLDSNQLSSLPPEFGQLTNLQSLDLGSNQLSSLP-------------------PE----- 172

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                   I   T+L    + L L    LS++P EI +  ++  LDL  N +  LPPE  
Sbjct: 173 --------IGQLTKL----QSLDLSRNQLSSLPPEIVQLTKLQSLDLRSNQLSSLPPEFG 220

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ+L L  N++   P  I+  L+ L  L L +N L  +P +  + +  LQ LDLS 
Sbjct: 221 QLTKLQSLDLGSNQLSSLPPEIV-QLTKLQSLDLGSNQLSSLPPEIVQ-LTNLQSLDLSS 278

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N ++SLP  P    L  LQ LYL   QL   P +I++L +L+ LDL  N L S+P     
Sbjct: 279 NQLSSLP--PEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQ 336

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LT L  LDL  N +S+LPPE+  L  +LQ+L L  N L S+
Sbjct: 337 LTKLQSLDLGSNQLSSLPPEIVQLT-NLQSLDLSSNQLSSL 376



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 138/380 (36%), Positives = 191/380 (50%), Gaps = 43/380 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   T L  L    N L+ +P  IG L+ L  LDL  N++ S+P       +L    +G+
Sbjct: 104 IGQLTNLQSLHLWINQLSSLPPEIGQLTNLQSLDLDSNQLSSLPPEFGQLTNLQSLDLGS 163

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N LS+LP E+G+L+KL +LDL  NQL     E  QL +L  LDL +N LS LPPE G++T
Sbjct: 164 NQLSSLPPEIGQLTKLQSLDLSRNQLSSLPPEIVQLTKLQSLDLRSNQLSSLPPEFGQLT 223

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L+ L L  N L +L                    PE             I   T+L   
Sbjct: 224 KLQSLDLGSNQLSSLP-------------------PE-------------IVQLTKL--- 248

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            + L L    LS++P EI +   +  LDLS N +  LPPE+     LQ+L LS N++   
Sbjct: 249 -QSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSL 307

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P  I+  L+ L  L L +N L  +P +  + +  LQ LDL  N ++SLP  P    L +L
Sbjct: 308 PPEIV-QLTKLQSLDLGSNQLSSLPPEIVQ-LTKLQSLDLGSNQLSSLP--PEIVQLTNL 363

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           Q L L   QL   P +I++L +L+ L LS N L S+P     LT L  LDL  N +S+LP
Sbjct: 364 QSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLP 423

Query: 377 PELGLLEPSLQALRLDGNPL 396
            E+  L  +L+ L L  NP+
Sbjct: 424 REIRQLS-NLKKLDLRRNPV 442



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 125/380 (32%), Positives = 181/380 (47%), Gaps = 65/380 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD++ N+L+ L        T L  L    N L+ +P  IG L++L  LDL +N++ S
Sbjct: 133 LQSLDLDSNQLSSLPPEF-GQLTNLQSLDLGSNQLSSLPPEIGQLTKLQSLDLSRNQLSS 191

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I     L    + +N LS+LP E G+L+KL +LDL SNQL     E  QL +L  L
Sbjct: 192 LPPEIVQLTKLQSLDLRSNQLSSLPPEFGQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSL 251

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL +N LS LPPEI ++T L+ L L+ N L +L                    PE     
Sbjct: 252 DLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLP-------------------PE----- 287

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                   I   T+L    + L L    LS++P EI +  ++  LDL  N +  LPPE+ 
Sbjct: 288 --------IVQLTKL----QSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIV 335

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ+L L  N++   P  I+  L++L  L L +N L  +P                 
Sbjct: 336 QLTKLQSLDLGSNQLSSLPPEIV-QLTNLQSLDLSSNQLSSLP----------------- 377

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                   P    L  LQ LYL   QL   P +I++L +L+ LDL  N L S+P   + L
Sbjct: 378 --------PEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPREIRQL 429

Query: 360 TSLTELDLSDNNISALPPEL 379
           ++L +LDL  N +  +PPE+
Sbjct: 430 SNLKKLDLRRNPV-PIPPEI 448



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 142/291 (48%), Gaps = 42/291 (14%)

Query: 110 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
           +A +  ++ LDLS   L+ LPPEIG++T L+ L L  N L +L       P    L  L+
Sbjct: 12  QAVKDEVTELDLSYKGLTILPPEIGQLTNLQTLHLDSNQLSSL------PPKIGQLTNLQ 65

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           +                              L L    LS++P EI +   +  L L  N
Sbjct: 66  T------------------------------LHLRSNQLSSLPPEIGQLTNLQTLHLGNN 95

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LPPE+    +LQ+L L  N++   P  I   L++L  L LD+N L  +P + F  +
Sbjct: 96  QLSSLPPEIGQLTNLQSLHLWINQLSSLPPEI-GQLTNLQSLDLDSNQLSSLPPE-FGQL 153

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ LDL  N ++SLP  P    L  LQ L L R QL   P +I++L +L+ LDL  N 
Sbjct: 154 TNLQSLDLGSNQLSSLP--PEIGQLTKLQSLDLSRNQLSSLPPEIVQLTKLQSLDLRSNQ 211

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L S+P  F  LT L  LDL  N +S+LPPE+  L   LQ+L L  N L S+
Sbjct: 212 LSSLPPEFGQLTKLQSLDLGSNQLSSLPPEIVQLT-KLQSLDLGSNQLSSL 261


>gi|255088489|ref|XP_002506167.1| predicted protein [Micromonas sp. RCC299]
 gi|226521438|gb|ACO67425.1| predicted protein [Micromonas sp. RCC299]
          Length = 394

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 138/383 (36%), Positives = 205/383 (53%), Gaps = 20/383 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   T L EL    N L  +P  IG L+ L+ L L  N +  +P+ I    SL E  +  
Sbjct: 26  IGQLTSLRELGLEGNELTSVPAEIGQLTALVELKLEDNMLTELPAEIGQLKSLVELKLEG 85

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+++PAE+G+L+ L   +L+ NQL E   E  QL+ L  L+LSNN L+ LP EIG++T
Sbjct: 86  NELTSMPAEIGQLASLVVSNLNYNQLTELPAEIGQLKSLRELNLSNNHLTILPAEIGQLT 145

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +L +L L GN L ++ + +  G   +L++    +L +N  +E       L ++       
Sbjct: 146 SLVELKLEGNELTSVPAEI--GQLASLVEL---KLEDNMLTELPAEIGQLKSLV------ 194

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             EL LEG  L+++P+EI +   +   +L+ N + ELP E+    SL+ L LS N++   
Sbjct: 195 --ELKLEGNELTSMPAEIGQLTSLVVSNLNYNQLTELPAEIGQLKSLRELNLSNNQLTSL 252

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P  I   L SL  LKL++N L ++P++    +  L  L+L  N + S+P       L  L
Sbjct: 253 PAEI-GQLKSLVELKLEDNMLTELPAE-IGQLKSLVELNLYNNRLTSVP--AEIGQLTSL 308

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
            EL L    L E P +I +L+ LR L L  N L S+P     LTSLTELDL  N ++++P
Sbjct: 309 VELKLEDNMLTELPAEIGQLKSLRELKLWNNRLTSVPAEIGQLTSLTELDLRCNELTSVP 368

Query: 377 PELGLLEPSLQALRLDGNPLRSI 399
            E+G L  SL  L L  N L S+
Sbjct: 369 AEIGQL-TSLTELVLHKNQLTSL 390



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 126/360 (35%), Positives = 182/360 (50%), Gaps = 20/360 (5%)

Query: 42  IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 101
           +G L  L  ++L  N++ S+P+ I    SL E  +  N L+++PAE+G+L+ L  L L  
Sbjct: 3   VGRLGALRTMNLGVNQLTSLPAEIGQLTSLRELGLEGNELTSVPAEIGQLTALVELKLED 62

Query: 102 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 160
           N L E   E  QL+ L  L L  N L+ +P EIG++ +L    L  N L  L        
Sbjct: 63  NMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLASLVVSNLNYNQLTEL-------- 114

Query: 161 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 220
            PA +  L+S    N  +   T     I   T L     EL LEG  L+++P+EI +   
Sbjct: 115 -PAEIGQLKSLRELNLSNNHLTILPAEIGQLTSLV----ELKLEGNELTSVPAEIGQLAS 169

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
           + +L L  N + ELP E+    SL  L L  N++   P  I   L+SL    L+ N L +
Sbjct: 170 LVELKLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEI-GQLTSLVVSNLNYNQLTE 228

Query: 281 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
           +P++    +  L+ L+LS N + SLP       L  L EL L    L E P +I +L+ L
Sbjct: 229 LPAE-IGQLKSLRELNLSNNQLTSLP--AEIGQLKSLVELKLEDNMLTELPAEIGQLKSL 285

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
             L+L  N L S+P     LTSL EL L DN ++ LP E+G L+ SL+ L+L  N L S+
Sbjct: 286 VELNLYNNRLTSVPAEIGQLTSLVELKLEDNMLTELPAEIGQLK-SLRELKLWNNRLTSV 344



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 140/285 (49%), Gaps = 39/285 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  N LT+L    I   T L EL    N L  +P  IG L+ L+ L L  N +  
Sbjct: 124 LRELNLSNNHLTILPAE-IGQLTSLVELKLEGNELTSVPAEIGQLASLVELKLEDNMLTE 182

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    SL E  +  N L+++PAE+G+L+ L   +L+ NQL E   E  QL+ L  L
Sbjct: 183 LPAEIGQLKSLVELKLEGNELTSMPAEIGQLTSLVVSNLNYNQLTELPAEIGQLKSLREL 242

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +LSNN L+ LP EIG++ +L +L L  N L  L         PA +  L+S +       
Sbjct: 243 NLSNNQLTSLPAEIGQLKSLVELKLEDNMLTEL---------PAEIGQLKSLV------- 286

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                               EL+L    L+++P+EI +   + +L L  N + ELP E+ 
Sbjct: 287 --------------------ELNLYNNRLTSVPAEIGQLTSLVELKLEDNMLTELPAEIG 326

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
              SL+ L L  N++   P  I   L+SL+ L L  N L  VP++
Sbjct: 327 QLKSLRELKLWNNRLTSVPAEI-GQLTSLTELDLRCNELTSVPAE 370



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 88/153 (57%), Gaps = 2/153 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  N+LT L    I     L EL    N+L  +P  IG L  L+ L+L+ NR+ S
Sbjct: 239 LRELNLSNNQLTSLPAE-IGQLKSLVELKLEDNMLTELPAEIGQLKSLVELNLYNNRLTS 297

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I    SL E  + +N L+ LPAE+G+L  L  L L +N+L     E  QL  L+ L
Sbjct: 298 VPAEIGQLTSLVELKLEDNMLTELPAEIGQLKSLRELKLWNNRLTSVPAEIGQLTSLTEL 357

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           DL  N L+ +P EIG++T+L +L+L  N L +L
Sbjct: 358 DLRCNELTSVPAEIGQLTSLTELVLHKNQLTSL 390



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           ++ RL  LR ++L  N L S+P     LTSL EL L  N ++++P E+G L  +L  L+L
Sbjct: 2   EVGRLGALRTMNLGVNQLTSLPAEIGQLTSLRELGLEGNELTSVPAEIGQL-TALVELKL 60

Query: 392 DGNPLRSI 399
           + N L  +
Sbjct: 61  EDNMLTEL 68


>gi|375364744|ref|NP_001096732.2| leucine-rich repeat-containing protein 40 [Bos taurus]
 gi|358411512|ref|XP_003582049.1| PREDICTED: leucine-rich repeat-containing protein 40 [Bos taurus]
 gi|359064126|ref|XP_003585940.1| PREDICTED: leucine-rich repeat-containing protein 40 [Bos taurus]
          Length = 602

 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 145/458 (31%), Positives = 233/458 (50%), Gaps = 70/458 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQNR 57
           +  LD+  N+LT +     AS++ L+ L+    S N L  +P  +  + RL  LD + N 
Sbjct: 176 LEDLDLSNNRLTTVP----ASFSFLSSLMRLNLSSNQLKSLPAELSGMKRLKHLDCNSNL 231

Query: 58  ILSIPSSISG----------------------CCSLAEFYMGNNALSALPAE-LGKLSKL 94
           + +IP  ++                       C  L E ++G N +  L AE L  L+ +
Sbjct: 232 LETIPPELASMESLELLYLRRNKLRFLPEFPSCKLLKELHVGENQIEMLGAEHLKHLNSI 291

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDL  N+LK    E   L+ L  LDLSNN +S LP  +G++  L+ L L GNPLRT+R
Sbjct: 292 LVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGRLH-LKFLALEGNPLRTIR 350

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMN 207
             ++N  T  +LKYLRS++ ++  S+  +  E  +T+   +R++V    T K L      
Sbjct: 351 REIINKGTQEVLKYLRSKIKDDGPSQNDSVIETAMTLPSESRVNVHTIITLKMLDYSDKQ 410

Query: 208 LSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILT 263
            + IP E+++A +   IT ++ S+N + E+P  +     + + + LS NK+  +    L 
Sbjct: 411 TALIPDEVFDAVKSNIITSINFSKNQLCEIPKRIVELKEMVSDVNLSFNKLS-FISLELC 469

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
           +L  L+ L L NN L  +P +  + +  LQ ++LS+N         F  LP +  LY   
Sbjct: 470 TLQKLTFLDLRNNFLSSLPEE-MESLTGLQTINLSFN--------RFKILPEV--LY--- 515

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLL 382
                      R+  L  + +S N + S+ P+  K + +L  LDL +N++  +PPELG  
Sbjct: 516 -----------RIPTLETILISNNQVGSLDPQKMKTMENLITLDLQNNDLLQIPPELGNC 564

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
             +L+ L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 565 -VNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 159/309 (51%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  I ++  L+KL ++ N L+ L   + N      L+ L       
Sbjct: 107 LTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITN------LRNL------- 153

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                  K L L+   L+ IP    +   +  LDLS N +  +P
Sbjct: 154 -----------------------KGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLTTVP 190

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              S  +SL  L LS N++K  P A L+ +  L  L  ++N L  +P +    +  L++L
Sbjct: 191 ASFSFLSSLMRLNLSSNQLKSLP-AELSGMKRLKHLDCNSNLLETIPPE-LASMESLELL 248

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL++   Q+     + L+ L  + +LDL  N L+S+P
Sbjct: 249 YLRRNKLRFLPE---FPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVP 305

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+++GT+ VLK
Sbjct: 306 DEITLLQSLERLDLSNNDISSLPCSLGRLH--LKFLALEGNPLRTIRREIINKGTQEVLK 363

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 364 YLRSKIKDD 372



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 171/394 (43%), Gaps = 73/394 (18%)

Query: 14  LSNNLIASW---TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 70
           LS N    W   T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +
Sbjct: 70  LSFNASERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELEN 129

Query: 71  LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV---LDLSNNSLS 127
           L +  + +N L  LP E+  L  L  L L  N+L   C+     +LS    LDLSNN L+
Sbjct: 130 LQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELT--CIPEGFEQLSNLEDLDLSNNRLT 187

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            +P     +++L +L L+ N L++L         PA L  ++ RL               
Sbjct: 188 TVPASFSFLSSLMRLNLSSNQLKSL---------PAELSGMK-RL--------------- 222

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
                      K L      L  IP E+     +  L L RN ++ L PE  SC  L+ L
Sbjct: 223 -----------KHLDCNSNLLETIPPELASMESLELLYLRRNKLRFL-PEFPSCKLLKEL 270

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            +  N+I+      L  L+S+  L L +N L+ VP D    +  L+ LDLS N I+SLP 
Sbjct: 271 HVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVP-DEITLLQSLERLDLSNNDISSLP- 328

Query: 307 NPPFSSLPHLQELYL----------RRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-- 354
                SL  L   +L          RR  + +   ++L+  + +I D   +   S+ E  
Sbjct: 329 ----CSLGRLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQNDSVIETA 384

Query: 355 ---------GFKNLTSLTELDLSDNNISALPPEL 379
                        + +L  LD SD   + +P E+
Sbjct: 385 MTLPSESRVNVHTIITLKMLDYSDKQTALIPDEV 418



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 29/203 (14%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S +L+L G NLS +P  +W       +D+   + Q L               S N  + W
Sbjct: 38  SGQLNLSGRNLSEVPQCVWRIN----VDIPEEANQNL---------------SFNASERW 78

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
            +      + L+ L + NN L+ + +D  + +P L +LD+  N + SLP       L +L
Sbjct: 79  WEQ-----TDLTKLIISNNKLQSL-TDDLRLLPALTVLDIHDNQLTSLPS--AIRELENL 130

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           Q+L +   +L+  P +I  L+ L+ L L  N L  IPEGF+ L++L +LDLS+N ++ +P
Sbjct: 131 QKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLTTVP 190

Query: 377 PELGLLEPSLQALRLDGNPLRSI 399
                L  SL  L L  N L+S+
Sbjct: 191 ASFSFLS-SLMRLNLSSNQLKSL 212


>gi|397521130|ref|XP_003830656.1| PREDICTED: leucine-rich repeat-containing protein 40 [Pan paniscus]
          Length = 602

 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 144/455 (31%), Positives = 230/455 (50%), Gaps = 64/455 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N LT +  +  +S + L  L  S N L  +P  I  + RL  LD + N + +
Sbjct: 176 LEDLDLSNNHLTTVPASF-SSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLET 234

Query: 61  IPSSISG----------------------CCSLAEFYMGNNALSALPAE-LGKLSKLGTL 97
           IP  ++G                      C  L E ++G N +  L AE L  L+ +  L
Sbjct: 235 IPPELAGMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVL 294

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL  N+LK    E   L+ L  LDLSNN +S LP  +G +  L+ L L GNPLRT+R  +
Sbjct: 295 DLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIRREI 353

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMNLSA 210
           ++  T  +LKYLRS++ ++  S++ +  E  +T+   +R+++    T K L       + 
Sbjct: 354 ISKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATL 413

Query: 211 IPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLS 266
           IP E+++A +   IT ++ S+N + E+P  +     + + + LS NK+  +    L  L 
Sbjct: 414 IPDEVFDAVKSNIITSINFSKNQLCEIPKRMVELKEMVSDVDLSFNKLS-FISLELCVLQ 472

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
            L+ L L NN L  +P +  + +  LQ ++LS+N         F  LP +  LY      
Sbjct: 473 KLTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN--------RFKMLPEV--LY------ 515

Query: 327 REAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
                   R+  L  + +S N + S+ P+  K + +LT LDL +N++  +PPELG    +
Sbjct: 516 --------RIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNC-VN 566

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           L+ L L GNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 567 LRTLLLGGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 157/309 (50%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  I ++  L+KL ++ N L+ L   + N      L+ L+      
Sbjct: 107 LTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITN------LRNLKC----- 155

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                    L L+   L+ I     +   +  LDLS N +  +P
Sbjct: 156 -------------------------LYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVP 190

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              SS +SL  L LS N++K  P A +  +  L  L  ++N L  +P +    +  L++L
Sbjct: 191 ASFSSLSSLVRLNLSSNELKSLP-AEINRMKRLKHLDCNSNLLETIPPE-LAGMESLELL 248

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL++   Q+     + L+ L  + +LDL  N L+S+P
Sbjct: 249 YLRRNKLRFLPE---FPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVP 305

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+ +GT+ VLK
Sbjct: 306 DEIILLQSLERLDLSNNDISSLPYSLGNLH--LKFLALEGNPLRTIRREIISKGTQEVLK 363

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 364 YLRSKIKDD 372



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 146/320 (45%), Gaps = 54/320 (16%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +L +  + +N
Sbjct: 79  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN 138

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV---LDLSNNSLSGLPPEIGKM 136
            L  LP E+  L  L  L L  N+L   C+     +LS    LDLSNN L+ +P     +
Sbjct: 139 KLKILPEEITNLRNLKCLYLQHNELT--CISEGFEQLSNLEDLDLSNNHLTTVPASFSSL 196

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           ++L +L L+ N L++L         PA +  ++ RL                        
Sbjct: 197 SSLVRLNLSSNELKSL---------PAEINRMK-RL------------------------ 222

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K L      L  IP E+     +  L L RN ++ L PE  SC+ L+ L +  N+I+ 
Sbjct: 223 --KHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL-PEFPSCSLLKELHVGENQIEM 279

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH- 315
                L  L+S+  L L +N L+ VP D    +  L+ LDLS N          SSLP+ 
Sbjct: 280 LEAEHLKHLNSILVLDLRDNKLKSVP-DEIILLQSLERLDLSNN--------DISSLPYS 330

Query: 316 LQELYLRRMQLREAPTDILR 335
           L  L+L+ + L   P   +R
Sbjct: 331 LGNLHLKFLALEGNPLRTIR 350


>gi|326925538|ref|XP_003208970.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Meleagris gallopavo]
          Length = 735

 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 138/436 (31%), Positives = 222/436 (50%), Gaps = 48/436 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  N+L  L  + I++   L +L  +KN L  +P  + S++ L +L L +N++ S
Sbjct: 331 LVRLNLACNQLKNLPAD-ISAMKSLKQLDCTKNYLETVPSELASMASLEQLYLRKNKLRS 389

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 118
           +P  +  C  L E + G N +  L AE L  L+ L  L+L  N++K    E   L +L  
Sbjct: 390 LPE-LPSCKLLKELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLER 448

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LDL+NN +S LP  +G ++ L+ L L GNPLR +R  L+   T  LLKYLRSR+   +D 
Sbjct: 449 LDLANNDISRLPYTLGNLSQLKFLALEGNPLRAIRRDLLQKGTQELLKYLRSRI---QDD 505

Query: 179 EASTTKEDLITMATRLS---------VTSKELSLEGMNLSAIPSEIWEA---GEITKLDL 226
            AS  +E  +T  T  S          T K L       + IP +++ A     +T ++ 
Sbjct: 506 TASPNEEPPVTAMTLPSESKINMHAITTLKLLEFSEKQAAVIPDDMFNAVRSNPVTSVNF 565

Query: 227 SRNSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           S+N +  +PP +     S+  +    NKI       L +L  L+ L + NN L  +P + 
Sbjct: 566 SKNQLTAIPPRIVELKDSVCDVNFGFNKISSV-SLELCTLHKLTHLDIRNNVLTSLPEE- 623

Query: 286 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
            + +  LQ+++LS+N                        + +  P+ + R+  L  + LS
Sbjct: 624 MEALTRLQVINLSFN------------------------RFKVFPSVLYRILTLETILLS 659

Query: 346 QNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
            N + S+ P   K +  L  LDL +N++  +PPELG  E +L+ L L+GNP R+ R  IL
Sbjct: 660 NNQVGSVDPLQLKKMEQLGTLDLQNNDLLQVPPELGNCE-TLRTLLLEGNPFRTPRAAIL 718

Query: 405 DRGTKAVLKYLKDKIP 420
            +GT AVL+YL+ +IP
Sbjct: 719 AKGTAAVLEYLRSRIP 734



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 177/336 (52%), Gaps = 49/336 (14%)

Query: 92  SKLGTLDLHSNQLKEYCV-EACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
           + L  L L SNQL+  C+ E  +L   LSVLD+ +N L+ LP  +G++  L+KL ++ N 
Sbjct: 214 TDLTKLILASNQLQ--CLSEDVRLLPALSVLDVHDNQLTSLPSALGQLENLQKLDVSHNK 271

Query: 149 LRTLRSSLVNGPTPALLKYLRSRL-PENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 207
           L+++   L+       L +L+S L   NE S        L+++        +EL L   +
Sbjct: 272 LKSIPEELLQ------LSHLKSLLLQHNELSHLPDGFGQLVSL--------EELDLSNNH 317

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+ IP+       + +L+L+ N ++ LP ++S+  SL+ L  ++N ++  P   L S++S
Sbjct: 318 LTDIPTSFALLINLVRLNLACNQLKNLPADISAMKSLKQLDCTKNYLETVPSE-LASMAS 376

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L  L L  N LR                       SLPE P   S   L+EL+    Q+ 
Sbjct: 377 LEQLYLRKNKLR-----------------------SLPELP---SCKLLKELHAGENQIE 410

Query: 328 EAPTDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
               + L+ L  L +L+L  N ++S+P+    L  L  LDL++N+IS LP  LG L   L
Sbjct: 411 ILNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLS-QL 469

Query: 387 QALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
           + L L+GNPLR+IRR +L +GT+ +LKYL+ +I ++
Sbjct: 470 KFLALEGNPLRAIRRDLLQKGTQELLKYLRSRIQDD 505



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 186/422 (44%), Gaps = 83/422 (19%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T LT+LI + N L  + E +  L  L  LD+H N++ S+PS++    +L +  + +N L 
Sbjct: 214 TDLTKLILASNQLQCLSEDVRLLPALSVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLK 273

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 141
           ++P EL +LS L +L L  N+L        QL  L  LDLSNN L+ +P     +  L +
Sbjct: 274 SIPEELLQLSHLKSLLLQHNELSHLPDGFGQLVSLEELDLSNNHLTDIPTSFALLINLVR 333

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 201
           L L  N L+ L         PA +  ++S                            K+L
Sbjct: 334 LNLACNQLKNL---------PADISAMKSL---------------------------KQL 357

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
                 L  +PSE+     + +L L +N ++ L PEL SC  L+ L    N+I+      
Sbjct: 358 DCTKNYLETVPSELASMASLEQLYLRKNKLRSL-PELPSCKLLKELHAGENQIEILNAEN 416

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP--------------E 306
           L  L+SLS L+L +N ++ VP D    +  L+ LDL+ N I+ LP              E
Sbjct: 417 LKHLNSLSVLELRDNKIKSVP-DEITLLQKLERLDLANNDISRLPYTLGNLSQLKFLALE 475

Query: 307 NPPFSSLPH------LQEL--YLR-RMQ-----------------LREAPTDILRLQQLR 340
             P  ++         QEL  YLR R+Q                   E+  ++  +  L+
Sbjct: 476 GNPLRAIRRDLLQKGTQELLKYLRSRIQDDTASPNEEPPVTAMTLPSESKINMHAITTLK 535

Query: 341 ILDLSQNSLQSIPEGFKNLTS---LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
           +L+ S+     IP+   N      +T ++ S N ++A+PP +  L+ S+  +    N + 
Sbjct: 536 LLEFSEKQAAVIPDDMFNAVRSNPVTSVNFSKNQLTAIPPRIVELKDSVCDVNFGFNKIS 595

Query: 398 SI 399
           S+
Sbjct: 596 SV 597



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 30/208 (14%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R+++ + E + + ++  A     WE  ++TKL L+ N +Q        C S    +L   
Sbjct: 189 RINLDTPEEAHQNLSFGAA-DRWWEQTDLTKLILASNQLQ--------CLSEDVRLLP-- 237

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
                         +LS L + +N L  +PS     +  LQ LD+S+N + S+PE     
Sbjct: 238 --------------ALSVLDVHDNQLTSLPS-ALGQLENLQKLDVSHNKLKSIPEE--LL 280

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
            L HL+ L L+  +L   P    +L  L  LDLS N L  IP  F  L +L  L+L+ N 
Sbjct: 281 QLSHLKSLLLQHNELSHLPDGFGQLVSLEELDLSNNHLTDIPTSFALLINLVRLNLACNQ 340

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSI 399
           +  LP ++  ++ SL+ L    N L ++
Sbjct: 341 LKNLPADISAMK-SLKQLDCTKNYLETV 367


>gi|296208241|ref|XP_002750998.1| PREDICTED: leucine-rich repeat-containing protein 40 [Callithrix
           jacchus]
          Length = 602

 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 145/455 (31%), Positives = 228/455 (50%), Gaps = 64/455 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT +  +  +S + L  L  S N L  +P  I  + RL  LD + N + +
Sbjct: 176 LEDLDLSNNRLTTVPASF-SSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLET 234

Query: 61  IPSSISG----------------------CCSLAEFYMGNNALSALPAE-LGKLSKLGTL 97
           IP  ++                       C  L E ++G N +  L AE L  L+ +  L
Sbjct: 235 IPPELAAMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVL 294

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL  N+LK    E   L  L  LDLSNN +S LP  +G +  L+ L L GNPLRT+R  +
Sbjct: 295 DLRDNKLKSVPDEIILLHSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIRREI 353

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMNLSA 210
           +N  T  +LKYL+S++ ++  S+  +  E  +T+   +R+++    T K L       + 
Sbjct: 354 INKGTQEVLKYLQSKIKDDGPSQRDSATETAMTLPSESRVNIHAIITLKMLDYSDKQATL 413

Query: 211 IPSEIWEAGE---ITKLDLSRNSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLS 266
           IP E+++A +   IT ++ S+N I E+P  +     ++  + LS NK+       L  L 
Sbjct: 414 IPDEVFDAVKSNIITSVNFSKNQICEIPKRMVELKETVSDVNLSFNKLSSI-SLELCMLQ 472

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
            L+ L L NN L  +P +  + +  LQ ++LS+N         F  LP +  LY      
Sbjct: 473 KLTFLDLRNNFLNSLPEE-MELLVRLQTINLSFN--------RFKMLPEV--LY------ 515

Query: 327 REAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
                   R+  L  + +S N + S+ P+  K + +LT LDL +N++  +PPELG    +
Sbjct: 516 --------RIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNC-VN 566

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           L+ L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 139/267 (52%), Gaps = 49/267 (18%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L +    L+++PS I E   + KL++S N ++ LP E+++  +L+ L L  N++    + 
Sbjct: 110 LDIHDNQLTSLPSAIRELANLQKLNISHNKLKILPEEITNLRNLKCLYLQHNELICISEG 169

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN------------ 307
               LSSL  L L NN L  VP+  F  +  L  L+LS N + SLP              
Sbjct: 170 -FEQLSSLEDLDLSNNRLTTVPA-SFSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDC 227

Query: 308 ---------PPFSSLPHLQELYLRRMQLREAP-----------------TDILRLQQLR- 340
                    P  +++  L+ LYLRR +LR  P                  ++L  + L+ 
Sbjct: 228 NSNLLETIPPELAAMESLELLYLRRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKH 287

Query: 341 -----ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
                +LDL  N L+S+P+    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNP
Sbjct: 288 LNSILVLDLRDNKLKSVPDEIILLHSLERLDLSNNDISSLPYSLGNLH--LKFLALEGNP 345

Query: 396 LRSIRRTILDRGTKAVLKYLKDKIPEN 422
           LR+IRR I+++GT+ VLKYL+ KI ++
Sbjct: 346 LRTIRREIINKGTQEVLKYLQSKIKDD 372



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 171/383 (44%), Gaps = 68/383 (17%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +L +  + +N
Sbjct: 79  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELANLQKLNISHN 138

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV---LDLSNNSLSGLPPEIGKM 136
            L  LP E+  L  L  L L  N+L   C+     +LS    LDLSNN L+ +P     +
Sbjct: 139 KLKILPEEITNLRNLKCLYLQHNEL--ICISEGFEQLSSLEDLDLSNNRLTTVPASFSSL 196

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           ++L +L L+ N L++L         PA +  ++ RL                        
Sbjct: 197 SSLVRLNLSSNQLKSL---------PAEINRMK-RL------------------------ 222

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K L      L  IP E+     +  L L RN ++ L PE  SC+ L+ L +  N+I+ 
Sbjct: 223 --KHLDCNSNLLETIPPELAAMESLELLYLRRNKLRFL-PEFPSCSLLKELHVGENQIEM 279

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
                L  L+S+  L L +N L+ VP D    +  L+ LDLS N I+SLP +    +L H
Sbjct: 280 LEAEHLKHLNSILVLDLRDNKLKSVP-DEIILLHSLERLDLSNNDISSLPYS--LGNL-H 335

Query: 316 LQELYL--------RRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-----------GF 356
           L+ L L        RR  + +   ++L+  Q +I D   +   S  E             
Sbjct: 336 LKFLALEGNPLRTIRREIINKGTQEVLKYLQSKIKDDGPSQRDSATETAMTLPSESRVNI 395

Query: 357 KNLTSLTELDLSDNNISALPPEL 379
             + +L  LD SD   + +P E+
Sbjct: 396 HAIITLKMLDYSDKQATLIPDEV 418


>gi|224058509|ref|XP_002188403.1| PREDICTED: leucine-rich repeat-containing protein 40 [Taeniopygia
           guttata]
          Length = 605

 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 131/415 (31%), Positives = 213/415 (51%), Gaps = 41/415 (9%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +++   L +L  +KN L  +P  + +++ L +L L +N++ S+P  +  C  L E + G 
Sbjct: 218 LSAMKSLRQLDCTKNYLETVPPKLATMASLEQLYLRKNKLRSLPE-LPSCKLLKELHAGE 276

Query: 79  NALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 136
           N +  L AE L +LS L  L+L  N++K    E   L +L  LDL+NN +S LP  +G +
Sbjct: 277 NQIEILNAENLKQLSSLCVLELRDNKIKAVPEEITVLQKLERLDLANNDISRLPYTLGNL 336

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           + L+ L L GNPLRT+R  L+   T  LLKYLRS++ ++    +       +T+ ++  V
Sbjct: 337 SQLKFLALEGNPLRTVRRDLLQKGTQELLKYLRSKIQDDGPGPSEEPPVTAMTLPSQSKV 396

Query: 197 ------TSKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNSIQELPPELSSCASLQTL 247
                 T K L       + IP  +++   A  +  ++ S+N ++E+PP L         
Sbjct: 397 NIHAITTLKLLEYSDKQAAEIPEAVFDAVGANPVATVNFSKNQLREIPPRLV-------- 448

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPE 306
                ++KD    +    + +SC+           S G   +  L  LDL  N+  +LPE
Sbjct: 449 -----ELKDSVCDVSLGFNKISCI-----------SSGLCLLQKLTHLDLRNNVLTALPE 492

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTEL 365
                +L  L  + L   + +  P+ + RL  L  + LS N + SI P   K L  L  L
Sbjct: 493 E--MEALKRLHTINLAFNRFKVFPSVLYRLPALETILLSNNQVGSIDPVQLKGLDKLGTL 550

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           DL +N++  +PPELG  E +L++L L+GNP R+ R  +L +GT AVL+YL+ +IP
Sbjct: 551 DLQNNDLLQVPPELGNCE-NLRSLLLEGNPFRTPRAAVLAKGTAAVLEYLRSRIP 604



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 179/334 (53%), Gaps = 45/334 (13%)

Query: 92  SKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           + L  L L SN+L+    E  QL   L+VLD+ +N L+ LP  +G++  L+KL ++ N L
Sbjct: 84  TDLTKLILASNKLQSLS-EDVQLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKL 142

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
           R+L   L+  P      +LRS L ++  +E S   E L  +     ++ +EL +    L+
Sbjct: 143 RSLPEELLQLP------HLRSLLVQH--NELSQLPEGLGQL-----LSLEELDVSNNQLT 189

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
           AIP+       + +L+L+ N ++ELP +LS+  SL+ L  ++N ++  P   L +++SL 
Sbjct: 190 AIPTSFALLVNLVRLNLACNQLKELPADLSAMKSLRQLDCTKNYLETVPPK-LATMASLE 248

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 329
            L L  N LR                       SLPE P   S   L+EL+    Q+   
Sbjct: 249 QLYLRKNKLR-----------------------SLPELP---SCKLLKELHAGENQIEIL 282

Query: 330 PTDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
             + L+ L  L +L+L  N ++++PE    L  L  LDL++N+IS LP  LG L   L+ 
Sbjct: 283 NAENLKQLSSLCVLELRDNKIKAVPEEITVLQKLERLDLANNDISRLPYTLGNLS-QLKF 341

Query: 389 LRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
           L L+GNPLR++RR +L +GT+ +LKYL+ KI ++
Sbjct: 342 LALEGNPLRTVRRDLLQKGTQELLKYLRSKIQDD 375



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 85/166 (51%), Gaps = 24/166 (14%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           NK++ +S+ L      LT L    N+L  +PE + +L RL  ++L  NR    PS +   
Sbjct: 462 NKISCISSGLCL-LQKLTHLDLRNNVLTALPEEMEALKRLHTINLAFNRFKVFPSVLYRL 520

Query: 69  CSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 127
            +L    + NN + ++ P +L  L KLGTLDL                       NN L 
Sbjct: 521 PALETILLSNNQVGSIDPVQLKGLDKLGTLDLQ----------------------NNDLL 558

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            +PPE+G    LR LLL GNP RT R++++   T A+L+YLRSR+P
Sbjct: 559 QVPPELGNCENLRSLLLEGNPFRTPRAAVLAKGTAAVLEYLRSRIP 604



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 186/414 (44%), Gaps = 63/414 (15%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI + N L  + E +  L  L  LD+H N++ S+PS++    +L +  + +N
Sbjct: 81  WEQTDLTKLILASNKLQSLSEDVQLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHN 140

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTT 138
            L +LP EL +L  L +L +  N+L +      Q L L  LD+SNN L+ +P     +  
Sbjct: 141 KLRSLPEELLQLPHLRSLLVQHNELSQLPEGLGQLLSLEELDVSNNQLTAIPTSFALLVN 200

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L +L L  N L+ L + L      + +K LR         +   TK  L T+  +L+  +
Sbjct: 201 LVRLNLACNQLKELPADL------SAMKSLR---------QLDCTKNYLETVPPKLATMA 245

Query: 199 --KELSLEGMNLSAIPS-------EIWEAGE----------------ITKLDLSRNSIQE 233
             ++L L    L ++P        +   AGE                +  L+L  N I+ 
Sbjct: 246 SLEQLYLRKNKLRSLPELPSCKLLKELHAGENQIEILNAENLKQLSSLCVLELRDNKIKA 305

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD----GFKDI 289
           +P E++    L+ L L+ N I   P   L +LS L  L L+ NPLR V  D    G +++
Sbjct: 306 VPEEITVLQKLERLDLANNDISRLP-YTLGNLSQLKFLALEGNPLRTVRRDLLQKGTQEL 364

Query: 290 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL-REAPTDILRLQQLRILDLSQNS 348
                  L Y  + + ++ P  S    +E  +  M L  ++  +I  +  L++L+ S   
Sbjct: 365 -------LKYLRSKIQDDGPGPS----EEPPVTAMTLPSQSKVNIHAITTLKLLEYSDKQ 413

Query: 349 LQSIPEGFKNLTS---LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
              IPE   +      +  ++ S N +  +PP L  L+ S+  + L  N +  I
Sbjct: 414 AAEIPEAVFDAVGANPVATVNFSKNQLREIPPRLVELKDSVCDVSLGFNKISCI 467



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 26/184 (14%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           RL+  S +L+L G  L+ +P  +W     T  +  +N              L  LIL+ N
Sbjct: 35  RLARRSGQLNLAGRGLTHVPEHVWRINLDTPEEAQQNLSFGAADRWWEQTDLTKLILASN 94

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSS 312
           K++   + +   L +L+ L + +N L  +PS     +  LQ LD+S+N            
Sbjct: 95  KLQSLSEDV-QLLPALTVLDVHDNQLTSLPS-ALGQLENLQKLDVSHN------------ 140

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
                       +LR  P ++L+L  LR L +  N L  +PEG   L SL ELD+S+N +
Sbjct: 141 ------------KLRSLPEELLQLPHLRSLLVQHNELSQLPEGLGQLLSLEELDVSNNQL 188

Query: 373 SALP 376
           +A+P
Sbjct: 189 TAIP 192


>gi|7020356|dbj|BAA91094.1| unnamed protein product [Homo sapiens]
          Length = 384

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 135/409 (33%), Positives = 215/409 (52%), Gaps = 42/409 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L E ++G N +  L
Sbjct: 4   LKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLPE-FPSCSLLKELHVGENQIEML 62

Query: 85  PAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 142
            AE L  L+ +  LDL  N+LK    E   LR L  LDLSNN +S LP  +G +  L+ L
Sbjct: 63  EAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLPYSLGNLH-LKFL 121

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLS----V 196
            L GNPLRT+R  +++  T  +LKYLRS + ++  S++ +  E  +T+   +R++    +
Sbjct: 122 ALEGNPLRTIRREIISKGTQEVLKYLRSTIKDDGPSQSESATETAMTLPSESRVNIHAII 181

Query: 197 TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRN 252
           T K L       + IP E+++A +   +T ++ S+N + E+P  +     + + + LS N
Sbjct: 182 TLKILDYSDKQATLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVELKEMVSDVDLSFN 241

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSS 312
           K+  +    L  L  L+ L L NN L  +P +  + +  LQ ++LS+N         F  
Sbjct: 242 KLS-FISLELCVLQKLTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN--------RFKM 291

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNN 371
           LP +  LY              R+  L  + +S N + S+ P+  K + +LT LDL +N+
Sbjct: 292 LPEV--LY--------------RIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNND 335

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           +  +PPELG    +L+ L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 336 LLQIPPELGNC-VNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 383



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 53/203 (26%)

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
           +  LD + N ++ +PPEL+   SL+ L L RNK++                         
Sbjct: 4   LKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFL----------------------- 40

Query: 281 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQL 339
                                      P F S   L+EL++   Q+     + L+ L  +
Sbjct: 41  ---------------------------PEFPSCSLLKELHVGENQIEMLEAEHLKHLNSI 73

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            +LDL  N L+S+P+    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+I
Sbjct: 74  LVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLPYSLGNLH--LKFLALEGNPLRTI 131

Query: 400 RRTILDRGTKAVLKYLKDKIPEN 422
           RR I+ +GT+ VLKYL+  I ++
Sbjct: 132 RREIISKGTQEVLKYLRSTIKDD 154



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 87/173 (50%), Gaps = 22/173 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S +D+  NKL+ +S  L      LT L    N LN +PE + SL RL  ++L  NR   
Sbjct: 233 VSDVDLSFNKLSFISLELCV-LQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKM 291

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P  +    +L    + NN             ++G++D    ++ E         L+ LD
Sbjct: 292 LPEVLYRIFTLETILISNN-------------QVGSVDPQKMKMME--------NLTTLD 330

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L NN L  +PPE+G    LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 331 LQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 383


>gi|194211220|ref|XP_001498327.2| PREDICTED: leucine-rich repeat-containing protein 40-like [Equus
           caballus]
          Length = 803

 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 147/478 (30%), Positives = 236/478 (49%), Gaps = 87/478 (18%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L ++ N+LT L       ++ L +L  S N L  +P +  SLS L+RL+L  N++ S
Sbjct: 354 LKGLYLQHNELTCLPEGFEQLFS-LEDLDLSNNRLTIVPASFSSLSSLVRLNLSSNQLKS 412

Query: 61  IPSSISG---------------------------------------------CCSLAEFY 75
           +P+ ISG                                             C  L E +
Sbjct: 413 LPAEISGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRNKLRFLPEFPSCKLLKELH 472

Query: 76  MGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEI 133
           +G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP  +
Sbjct: 473 VGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSL 532

Query: 134 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--A 191
           GK+  L+ L L GNPLRT+R  ++N  T  +LKYL+S++ ++E S+ ++  E  +T+   
Sbjct: 533 GKL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLQSKIKDDEPSQNNSVTETAMTLPSE 591

Query: 192 TRLSVTS----KELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASL 244
           +R++V S    K L         IP E+++A +   +T ++ S+N + E+P  +     +
Sbjct: 592 SRVNVHSIVTLKILDYSDKQAVLIPDEVFDAVKSNIVTSVNFSKNQLCEIPKRIIELKEM 651

Query: 245 QTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 303
            + + LS NK+  +    L +L  L+ L L NN L  +P +  + +  LQ ++LS+N   
Sbjct: 652 VSDVNLSFNKL-SFVSLELCTLQKLTFLDLRNNFLNSLPEE-MESLIRLQTINLSFN--- 706

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSL 362
                 F  LP +                + R+  L  + +S N + S+ P+  K + +L
Sbjct: 707 -----RFKILPEV----------------LYRIPTLETILISNNQVGSVDPQKMKTMENL 745

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
             LDL +N++  +PPELG    +L+ L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 746 ITLDLQNNDLLQIPPELGNCV-NLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 802



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/309 (33%), Positives = 160/309 (51%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  I ++  L+KL ++ N L+ L   + N      L+ L       
Sbjct: 308 LTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITN------LRNL------- 354

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                  K L L+   L+ +P    +   +  LDLS N +  +P
Sbjct: 355 -----------------------KGLYLQHNELTCLPEGFEQLFSLEDLDLSNNRLTIVP 391

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              SS +SL  L LS N++K  P A ++ +  L  L  ++N L  +P +    +  L++L
Sbjct: 392 ASFSSLSSLVRLNLSSNQLKSLP-AEISGMKRLKHLDCNSNLLETIPPE-LASMESLELL 449

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL++   Q+     + L+ L  + +LDL  N L+S+P
Sbjct: 450 YLRRNKLRFLPE---FPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVP 506

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+++GT+ VLK
Sbjct: 507 DEITLLQSLERLDLSNNDISSLPYSLGKLH--LKFLALEGNPLRTIRREIINKGTQEVLK 564

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 565 YLQSKIKDD 573



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 171/383 (44%), Gaps = 68/383 (17%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +L +  + +N
Sbjct: 280 WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN 339

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCV-EACQLRLSV--LDLSNNSLSGLPPEIGKM 136
            L  LP E+  L  L  L L  N+L   C+ E  +   S+  LDLSNN L+ +P     +
Sbjct: 340 KLKILPEEITNLRNLKGLYLQHNELT--CLPEGFEQLFSLEDLDLSNNRLTIVPASFSSL 397

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           ++L +L L+ N L++L         PA               E S  K        RL  
Sbjct: 398 SSLVRLNLSSNQLKSL---------PA---------------EISGMK--------RL-- 423

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K L      L  IP E+     +  L L RN ++ L PE  SC  L+ L +  N+I+ 
Sbjct: 424 --KHLDCNSNLLETIPPELASMESLELLYLRRNKLRFL-PEFPSCKLLKELHVGENQIEM 480

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
                L  L+S+  L L +N L+ VP D    +  L+ LDLS N I+SLP +     L H
Sbjct: 481 LGAEHLKHLNSILVLDLRDNKLKSVP-DEITLLQSLERLDLSNNDISSLPYS--LGKL-H 536

Query: 316 LQELYL--------RRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-----------GF 356
           L+ L L        RR  + +   ++L+  Q +I D   +   S+ E             
Sbjct: 537 LKFLALEGNPLRTIRREIINKGTQEVLKYLQSKIKDDEPSQNNSVTETAMTLPSESRVNV 596

Query: 357 KNLTSLTELDLSDNNISALPPEL 379
            ++ +L  LD SD     +P E+
Sbjct: 597 HSIVTLKILDYSDKQAVLIPDEV 619


>gi|301780906|ref|XP_002925869.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Ailuropoda melanoleuca]
 gi|281346252|gb|EFB21836.1| hypothetical protein PANDA_015445 [Ailuropoda melanoleuca]
          Length = 603

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 145/454 (31%), Positives = 222/454 (48%), Gaps = 86/454 (18%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG----------------- 67
           L +L  S N L  +P +  SLS L+RL+L  N++ S+P+ ISG                 
Sbjct: 177 LEDLDISNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLEAV 236

Query: 68  ----------------------------CCSLAEFYMGNNALSAL-PAELGKLSKLGTLD 98
                                       C  L E Y+G N +  L P  L  L+ +  LD
Sbjct: 237 PPELANMESLELLYLRRNKLRFLPEFPSCRLLKELYVGENQIEILGPEHLKHLNSILVLD 296

Query: 99  LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
           L  N+LK    E   L+ L  LDLSNN +S LP  +GK+  L+ L L GNPLRT+R  ++
Sbjct: 297 LRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGKL-HLKFLALEGNPLRTIRREII 355

Query: 158 NGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMNLSAI 211
           N  T  +LKYLRS++ ++  S + +     +T+   +R++V    T K L   G   + I
Sbjct: 356 NKGTQEVLKYLRSKIKDDGPSPSDSVIGTAMTLPSESRVNVHAIITLKILDYSGKQTTLI 415

Query: 212 PSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLSS 267
           P E+++A +   IT ++ S+N + E+P  +     + + + LS NK+  +    L  L  
Sbjct: 416 PDEVFDAVKGNIITSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNKLS-FISLELCMLQK 474

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L+ L L NN L  +P +  + +  LQ ++LS+N         F  LP +         L 
Sbjct: 475 LTFLDLRNNFLNSLPEE-MESLIKLQTINLSFN--------RFKILPEV---------LY 516

Query: 328 EAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
             PT       L  + +S N + S+ P+  K + +L  LDL +N++  +PPELG    +L
Sbjct: 517 HIPT-------LETILISNNQVGSVDPQKMKAMENLITLDLQNNDLLQIPPELGNC-VNL 568

Query: 387 QALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           + L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 569 RTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 602



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 160/309 (51%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  I ++  L+KL ++ N L+ L   + N      L+ L       
Sbjct: 108 LTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLQILPEEITN------LRNL------- 154

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                  K L L+   L+ IP    +   +  LD+S N +  +P
Sbjct: 155 -----------------------KGLYLQHNELTCIPEGFEQLFNLEDLDISNNRLTTVP 191

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              SS +SL  L LS N++K  P A ++ +  L  L  ++N L  VP +   ++  L++L
Sbjct: 192 ASFSSLSSLVRLNLSSNQLKSLP-AEISGMKRLKHLDCNSNLLEAVPPE-LANMESLELL 249

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE-APTDILRLQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+ELY+   Q+    P  +  L  + +LDL  N L+S+P
Sbjct: 250 YLRRNKLRFLPE---FPSCRLLKELYVGENQIEILGPEHLKHLNSILVLDLRDNKLKSVP 306

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+++GT+ VLK
Sbjct: 307 DEITLLQSLERLDLSNNDISSLPCSLGKLH--LKFLALEGNPLRTIRREIINKGTQEVLK 364

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 365 YLRSKIKDD 373



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 136/290 (46%), Gaps = 46/290 (15%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +L +  + +N
Sbjct: 80  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN 139

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCV-EACQ--LRLSVLDLSNNSLSGLPPEIGKM 136
            L  LP E+  L  L  L L  N+L   C+ E  +    L  LD+SNN L+ +P     +
Sbjct: 140 KLQILPEEITNLRNLKGLYLQHNELT--CIPEGFEQLFNLEDLDISNNRLTTVPASFSSL 197

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           ++L +L L+ N L++L         PA               E S  K        RL  
Sbjct: 198 SSLVRLNLSSNQLKSL---------PA---------------EISGMK--------RL-- 223

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K L      L A+P E+     +  L L RN ++ L PE  SC  L+ L +  N+I+ 
Sbjct: 224 --KHLDCNSNLLEAVPPELANMESLELLYLRRNKLRFL-PEFPSCRLLKELYVGENQIEI 280

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
                L  L+S+  L L +N L+ VP D    +  L+ LDLS N I+SLP
Sbjct: 281 LGPEHLKHLNSILVLDLRDNKLKSVP-DEITLLQSLERLDLSNNDISSLP 329



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 91/177 (51%), Gaps = 6/177 (3%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ ++   N+L  +   ++    M++++  S N L+ +   +  L +L  LDL  N + S
Sbjct: 428 ITSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNS 487

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----L 116
           +P  +     L    +  N    LP  L  +  L T+ + +NQ+    V+  +++    L
Sbjct: 488 LPEEMESLIKLQTINLSFNRFKILPEVLYHIPTLETILISNNQVG--SVDPQKMKAMENL 545

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
             LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 546 ITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 602



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 29/203 (14%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S +L+L G NLS +P  +W       +D+   + Q L               S    + W
Sbjct: 39  SGQLNLSGRNLSEVPQCVWRIN----VDIPEEANQNL---------------SFGATERW 79

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
            +      + L+ L + NN L+ + +D  + +P L +LD+  N + SLP       L +L
Sbjct: 80  WEQ-----TDLTKLIISNNKLQSL-TDDLRLLPALTVLDIHDNQLTSLPS--AIRELENL 131

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           Q+L +   +L+  P +I  L+ L+ L L  N L  IPEGF+ L +L +LD+S+N ++ +P
Sbjct: 132 QKLNVSHNKLQILPEEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDISNNRLTTVP 191

Query: 377 PELGLLEPSLQALRLDGNPLRSI 399
                L  SL  L L  N L+S+
Sbjct: 192 ASFSSLS-SLVRLNLSSNQLKSL 213


>gi|311259185|ref|XP_003127976.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Sus
           scrofa]
          Length = 602

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 225/454 (49%), Gaps = 86/454 (18%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG----------------- 67
           L +L  S N L+ +P +  SLS ++RL++  N++ S+P+ ISG                 
Sbjct: 176 LEDLDLSNNRLSSIPASFSSLSSVVRLNISSNQLKSLPAEISGMKRLKHLDCNSNLLETI 235

Query: 68  ----------------------------CCSLAEFYMGNNALSALPAE-LGKLSKLGTLD 98
                                       C  L E ++G N +  L AE L  L+ +  LD
Sbjct: 236 PPELASMESLELLYLRRNKLRFLPEFPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLD 295

Query: 99  LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
           L  N+LK    E   L+ L  LDLSNN +S LP  +GK+  L+ L L GNPLRT+R  ++
Sbjct: 296 LRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGKL-HLKFLALEGNPLRTIRREII 354

Query: 158 NGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLS----VTSKELSLEGMNLSAI 211
           N  T  +LKYLRS++ ++  S++    E  +T+   +R++    +T K L       + I
Sbjct: 355 NKGTQEVLKYLRSKIKDDGLSQSDCVTETAMTLPSESRVNIHAIITLKTLDYSDKQTALI 414

Query: 212 PSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLSS 267
           P E+++A +   IT ++ S+N + E+P  +     + + + LS NK+  +    L  L  
Sbjct: 415 PDEVFDAVKSNVITSVNFSKNQLCEIPKRIVEMKEMVSDVNLSFNKLS-FISLELCMLQK 473

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L+ L L NN L  +P +  + +  LQ ++LS+N         F  LP +  LY       
Sbjct: 474 LTFLDLRNNFLNSLPEE-MESLVRLQTINLSFN--------RFKILPEV--LY------- 515

Query: 328 EAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
                  R+  L  + +S N + S+ P+  K + +L  LDL +N++  +PPELG    +L
Sbjct: 516 -------RIPTLETILISNNQVGSVDPQKMKTMENLITLDLQNNDLLQIPPELGNC-VNL 567

Query: 387 QALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           + L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 568 RTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 157/309 (50%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPE 174
           L+VLD+ +N L+ LP  I ++  L+KL ++ N L+ L   + N      L+ L+   L  
Sbjct: 107 LTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITN------LRNLKGLYLQH 160

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
           NE +      E L  +        ++L L    LS+IP+       + +L++S N ++ L
Sbjct: 161 NELTCIPEGFEQLFNL--------EDLDLSNNRLSSIPASFSSLSSVVRLNISSNQLKSL 212

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P E+S    L+ L  + N ++  P   L S+ SL  L L  N LR +P            
Sbjct: 213 PAEISGMKRLKHLDCNSNLLETIPPE-LASMESLELLYLRRNKLRFLPE----------- 260

Query: 295 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
                          F S   L+EL++   Q+     + L+ L  + +LDL  N L+S+P
Sbjct: 261 ---------------FPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVP 305

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+++GT+ VLK
Sbjct: 306 DEITLLQSLERLDLSNNDISSLPCSLGKLH--LKFLALEGNPLRTIRREIINKGTQEVLK 363

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 364 YLRSKIKDD 372



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 174/385 (45%), Gaps = 72/385 (18%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +L +  + +N
Sbjct: 79  WEQTDLTKLIISNNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN 138

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCV-EACQ--LRLSVLDLSNNSLSGLPPEIGKM 136
            L  LP E+  L  L  L L  N+L   C+ E  +    L  LDLSNN LS +P     +
Sbjct: 139 KLKILPEEITNLRNLKGLYLQHNELT--CIPEGFEQLFNLEDLDLSNNRLSSIPASFSSL 196

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           +++ +L ++ N L++L         PA               E S  K        RL  
Sbjct: 197 SSVVRLNISSNQLKSL---------PA---------------EISGMK--------RL-- 222

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K L      L  IP E+     +  L L RN ++ L PE  SC  L+ L +  N+I+ 
Sbjct: 223 --KHLDCNSNLLETIPPELASMESLELLYLRRNKLRFL-PEFPSCKLLKELHVGENQIEM 279

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP- 314
                L  L+S+  L L +N L+ VP D    +  L+ LDLS N I+SLP      SL  
Sbjct: 280 LGAEHLKHLNSILVLDLRDNKLKSVP-DEITLLQSLERLDLSNNDISSLP-----CSLGK 333

Query: 315 -HLQELYL--------RRMQLREAPTDILRLQQLRILD--LSQN-----SLQSIPE---- 354
            HL+ L L        RR  + +   ++L+  + +I D  LSQ+     +  ++P     
Sbjct: 334 LHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGLSQSDCVTETAMTLPSESRV 393

Query: 355 GFKNLTSLTELDLSDNNISALPPEL 379
               + +L  LD SD   + +P E+
Sbjct: 394 NIHAIITLKTLDYSDKQTALIPDEV 418



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 6/177 (3%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ ++   N+L  +   ++    M++++  S N L+ +   +  L +L  LDL  N + S
Sbjct: 427 ITSVNFSKNQLCEIPKRIVEMKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNS 486

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----L 116
           +P  +     L    +  N    LP  L ++  L T+ + +NQ+    V+  +++    L
Sbjct: 487 LPEEMESLVRLQTINLSFNRFKILPEVLYRIPTLETILISNNQVGS--VDPQKMKTMENL 544

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
             LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 545 ITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 29/203 (14%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S +L+L G NLS +P  +W                ++P E +     Q L  S  + + W
Sbjct: 38  SGQLNLSGRNLSEVPQCVWRIN------------VDIPEEAN-----QNLSFSATE-RWW 79

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
               LT L       + NN L+ + SD  + +P L +LD+  N + SLP       L +L
Sbjct: 80  EQTDLTKLI------ISNNKLQSL-SDDLRLLPALTVLDIHDNQLTSLPS--AIRELENL 130

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           Q+L +   +L+  P +I  L+ L+ L L  N L  IPEGF+ L +L +LDLS+N +S++P
Sbjct: 131 QKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDLSNNRLSSIP 190

Query: 377 PELGLLEPSLQALRLDGNPLRSI 399
                L  S+  L +  N L+S+
Sbjct: 191 ASFSSLS-SVVRLNISSNQLKSL 212


>gi|255078866|ref|XP_002503013.1| predicted protein [Micromonas sp. RCC299]
 gi|226518279|gb|ACO64271.1| predicted protein [Micromonas sp. RCC299]
          Length = 423

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 143/396 (36%), Positives = 197/396 (49%), Gaps = 24/396 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+LT L    I   T L EL    N L   P  IG L+ L  L LH N++ S
Sbjct: 41  LQELKLYNNQLTSLPAE-IGQLTSLRELYLCNNKLTIAPAEIGQLTALTELLLHGNQLTS 99

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I    SL E Y+ +N L+ +PAE+ +L+ L  L LH NQL     E  QL  L+ L
Sbjct: 100 VPAEIGLLTSLRELYLHDNQLTGVPAEIVQLTTLEALWLHGNQLTSLPAEIGQLTSLTGL 159

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--RLPENED 177
            L NN L+ LP EIG++T+L  L L GN L ++         PA +  L S  +L   ++
Sbjct: 160 RLYNNRLTSLPAEIGQLTSLEALYLHGNQLTSV---------PAEIGQLTSLEKLELYDN 210

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
              S   E  I   T L    K L L G  L+++P+EI +   +T L L  N +  LP E
Sbjct: 211 QLTSVPAE--IGQLTSL----KALWLFGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAE 264

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           +    SL+ L L  N++   P  I   L+SL  L L  N L  VP++    +  L  L L
Sbjct: 265 IGQLTSLEALWLHDNQLTSVPAEI-GQLTSLKELWLHGNRLTSVPAE-IGQLTSLGALSL 322

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
             N + SLPE      L  L  LYL R QL   P +I +L  L  L L  N L SIP   
Sbjct: 323 YNNRLTSLPEE--IGQLTSLDRLYLGRNQLMSVPEEIGQLSSLLWLYLGSNQLTSIPAEI 380

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
             LTSL+ LDLS N ++++P  +  L  +   +R+D
Sbjct: 381 AQLTSLSVLDLSGNQLTSVPAAIRELRAAGCDVRMD 416



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 142/407 (34%), Positives = 205/407 (50%), Gaps = 21/407 (5%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           GN+LT L    I   T LT+L   +N L  +P  I  L+ L  L L+ N++ S+P+ I  
Sbjct: 2   GNQLTSLPAE-IGQLTSLTKLNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQ 60

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 126
             SL E Y+ NN L+  PAE+G+L+ L  L LH NQL     E   L  L  L L +N L
Sbjct: 61  LTSLRELYLCNNKLTIAPAEIGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQL 120

Query: 127 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 186
           +G+P EI ++TTL  L L GN L +L + +    +   L+   +RL         T+   
Sbjct: 121 TGVPAEIVQLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRL---------TSLPA 171

Query: 187 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
            I   T L    + L L G  L+++P+EI +   + KL+L  N +  +P E+    SL+ 
Sbjct: 172 EIGQLTSL----EALYLHGNQLTSVPAEIGQLTSLEKLELYDNQLTSVPAEIGQLTSLKA 227

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           L L  N++   P  I   L+SL+ L+L NN L  +P++    +  L+ L L  N + S+P
Sbjct: 228 LWLFGNQLTSLPAEI-GQLTSLTGLRLYNNRLTSLPAE-IGQLTSLEALWLHDNQLTSVP 285

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
                  L  L+EL+L   +L   P +I +L  L  L L  N L S+PE    LTSL  L
Sbjct: 286 AE--IGQLTSLKELWLHGNRLTSVPAEIGQLTSLGALSLYNNRLTSLPEEIGQLTSLDRL 343

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVL 412
            L  N + ++P E+G L  SL  L L  N L SI   I    + +VL
Sbjct: 344 YLGRNQLMSVPEEIGQLS-SLLWLYLGSNQLTSIPAEIAQLTSLSVL 389


>gi|220907470|ref|YP_002482781.1| hypothetical protein Cyan7425_2057 [Cyanothece sp. PCC 7425]
 gi|219864081|gb|ACL44420.1| leucine-rich repeat protein [Cyanothece sp. PCC 7425]
          Length = 482

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 149/452 (32%), Positives = 219/452 (48%), Gaps = 39/452 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +E N+LT L    I S   L EL  + NLL  +P+TI SL++L  L+L +N++  
Sbjct: 34  LQELSLENNQLTELPEA-IGSLIQLQELNLASNLLIKLPKTISSLTQLKELNLRENQLAD 92

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I     L E ++ +N L+ LP  +G L++L  L L+SNQL +       L RL+ L
Sbjct: 93  VPDEIGFLTQLQELWLSSNQLTHLPEMIGSLTQLQELFLYSNQLTDLPESLANLTRLNWL 152

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPENE 176
            L  N L+ LP  IG +T L +L L  N L +L     SL+      L     + LPE+ 
Sbjct: 153 SLETNHLTVLPETIGSLTLLNELDLKENQLTSLPESVGSLIRLKKLDLADNQLTHLPESI 212

Query: 177 DS-----EASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
            S     E       L ++   +      KEL +    LS +P  I     + K+DLS N
Sbjct: 213 GSLSRLNELCLCNNQLNSLPKSIGHLKQLKELCVCNNQLSNLPGSIGSLRRLRKIDLSDN 272

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAI----------------------LTSLSS 267
            +  LP  + S   L  L LS N++K  P++I                      + SL+ 
Sbjct: 273 QLTYLPESIGSLTQLYWLDLSGNQLKHLPESIGSLTQLLGLSLSNNQLTELPTAICSLTD 332

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L+L +N L ++P +   D+  L+ L+LS N +  LP       L  L+  YL   QL
Sbjct: 333 LESLRLSDNQLTEIP-ESISDLTELEWLNLSRNQLTELP--AAIGLLTELETFYLSENQL 389

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
            E P  I  L QL  + L  N L  +PE F +L  L  L L +N ++ LP  +G L   L
Sbjct: 390 TELPESIGALIQLDWIFLDDNQLIKLPESFSSLIQLRRLYLENNQLTELPVAIGSL-VQL 448

Query: 387 QALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           + ++L+GNPL S   T+  +GT AVL YL+ K
Sbjct: 449 EEIKLNGNPLNSDLATVYAQGTSAVLAYLRAK 480



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 192/400 (48%), Gaps = 38/400 (9%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           MPE+IGSL++L +L +  N++  +P SI    +L E  + NN L+ LP  +G L +L  L
Sbjct: 1   MPESIGSLTQLQKLGVSHNQLTQLPESICLLINLQELSLENNQLTELPEAIGSLIQLQEL 60

Query: 98  DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           +L SN L +       L +L  L+L  N L+ +P EIG +T L++L L+ N L  L   +
Sbjct: 61  NLASNLLIKLPKTISSLTQLKELNLRENQLADVPDEIGFLTQLQELWLSSNQLTHLPEMI 120

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT-RLSVTSK---------ELSLEGM 206
            +      L    ++L +  +S A+ T+ + +++ T  L+V  +         EL L+  
Sbjct: 121 GSLTQLQELFLYSNQLTDLPESLANLTRLNWLSLETNHLTVLPETIGSLTLLNELDLKEN 180

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI----- 261
            L+++P  +     + KLDL+ N +  LP  + S + L  L L  N++   P +I     
Sbjct: 181 QLTSLPESVGSLIRLKKLDLADNQLTHLPESIGSLSRLNELCLCNNQLNSLPKSIGHLKQ 240

Query: 262 -----------------LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 303
                            + SL  L  + L +N L  +P +    +  L  LDLS N +  
Sbjct: 241 LKELCVCNNQLSNLPGSIGSLRRLRKIDLSDNQLTYLP-ESIGSLTQLYWLDLSGNQLKH 299

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
           LPE+    SL  L  L L   QL E PT I  L  L  L LS N L  IPE   +LT L 
Sbjct: 300 LPES--IGSLTQLLGLSLSNNQLTELPTAICSLTDLESLRLSDNQLTEIPESISDLTELE 357

Query: 364 ELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            L+LS N ++ LP  +GLL   L+   L  N L  +  +I
Sbjct: 358 WLNLSRNQLTELPAAIGLL-TELETFYLSENQLTELPESI 396


>gi|456875041|gb|EMF90275.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 528

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 136/400 (34%), Positives = 206/400 (51%), Gaps = 27/400 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL++  N+LT L    I +   L EL    N    +P+ IG L +L  LDL  N++ +
Sbjct: 127 LQKLNLNQNQLTTLPKE-IGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTT 185

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I     L E  +G N L+ LP E+G L KL TL+L+ NQL     E  +L +L  L
Sbjct: 186 LPKEIEKLQKLQELDLGINQLTTLPKEIGNLQKLQTLNLNHNQLTNLPKEIGKLQKLQTL 245

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L++N L+ LP EIG +  L++L L  N L TL   +       L K     L    D++
Sbjct: 246 NLNHNQLTTLPKEIGNLQNLQQLYLYSNQLTTLPKEI-----EKLQKLQELHL---SDNQ 297

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            ++  E++  +        ++LSL    L+ IP EI    ++ +LDL +N +  LP E+ 
Sbjct: 298 LTSVPEEIGNLQNL-----QKLSLHSNQLTIIPKEIGNLQKLEELDLGQNQLTILPKEIG 352

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +   LQTL L  NK+   P  I   L +   L L+ N L  +P    K+I  LQ L   Y
Sbjct: 353 NLQKLQTLDLGNNKLTALPKEI-GKLQNPQTLYLNRNQLTTLP----KEIGNLQKLKWLY 407

Query: 300 ----NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
               N+A++P+     SL  LQ L L   +L   P +I  LQ L+ L+L +N L ++P+ 
Sbjct: 408 LAHNNLATIPQ--EIGSLQSLQVLTLNSNRLTTLPKEIGNLQNLQGLNLDKNQLTTLPKE 465

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
              L +L  LDLS+N +++ P E+G L+  L+ LRL+  P
Sbjct: 466 IGKLRNLESLDLSENPLTSFPEEIGKLQ-HLKWLRLENIP 504



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 138/402 (34%), Positives = 203/402 (50%), Gaps = 21/402 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L +  N+LT L    +     L EL   +N L  +PE IG L  L +L+L+QN++ ++P 
Sbjct: 84  LGLGSNQLTTLPKE-VGKLQNLEELDLGQNQLTTLPEEIGKLQNLQKLNLNQNQLTTLPK 142

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I     L E Y+G+N  + LP  +GKL KL  LDL  NQL     E  +L +L  LDL 
Sbjct: 143 EIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQELDLG 202

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG +  L+ L L  N L  L         P  +  L+     N +    T
Sbjct: 203 INQLTTLPKEIGNLQKLQTLNLNHNQLTNL---------PKEIGKLQKLQTLNLNHNQLT 253

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
           T    I     L    ++L L    L+ +P EI +  ++ +L LS N +  +P E+ +  
Sbjct: 254 TLPKEIGNLQNL----QQLYLYSNQLTTLPKEIEKLQKLQELHLSDNQLTSVPEEIGNLQ 309

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +LQ L L  N++   P  I  +L  L  L L  N L  +P +   ++  LQ LDL  N +
Sbjct: 310 NLQKLSLHSNQLTIIPKEI-GNLQKLEELDLGQNQLTILPKE-IGNLQKLQTLDLGNNKL 367

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
            +LP+      L + Q LYL R QL   P +I  LQ+L+ L L+ N+L +IP+   +L S
Sbjct: 368 TALPK--EIGKLQNPQTLYLNRNQLTTLPKEIGNLQKLKWLYLAHNNLATIPQEIGSLQS 425

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L  L L+ N ++ LP E+G L+ +LQ L LD N L ++ + I
Sbjct: 426 LQVLTLNSNRLTTLPKEIGNLQ-NLQGLNLDKNQLTTLPKEI 466



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 104/197 (52%), Gaps = 6/197 (3%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+ +P EI     +  L L  N +  LP E+    +L+ L L +N++   P+ I   L +
Sbjct: 68  LTTLPKEIENLQNLKILGLGSNQLTTLPKEVGKLQNLEELDLGQNQLTTLPEEI-GKLQN 126

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L L+ N L  +P +   ++  LQ L L  N  A+LP+      L  LQEL L   QL
Sbjct: 127 LQKLNLNQNQLTTLPKE-IGNLQKLQELYLGDNQFATLPK--AIGKLQKLQELDLGINQL 183

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
              P +I +LQ+L+ LDL  N L ++P+   NL  L  L+L+ N ++ LP E+G L+  L
Sbjct: 184 TTLPKEIEKLQKLQELDLGINQLTTLPKEIGNLQKLQTLNLNHNQLTNLPKEIGKLQ-KL 242

Query: 387 QALRLDGNPLRSIRRTI 403
           Q L L+ N L ++ + I
Sbjct: 243 QTLNLNHNQLTTLPKEI 259


>gi|421127271|ref|ZP_15587495.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136024|ref|ZP_15596135.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019758|gb|EKO86572.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435361|gb|EKP84493.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 659

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 146/417 (35%), Positives = 215/417 (51%), Gaps = 22/417 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT+L    I     L EL  S N L  +P+ IG L  L RL+L+  ++ +
Sbjct: 188 LQMLDLGNNQLTILPKE-IGQLQNLQELYLSYNQLTILPKEIGQLENLQRLNLNSQKLTT 246

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    +  N+L+ LP E+G+L  L  LDLH N+L    +E  QL+ L  L
Sbjct: 247 LPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQEL 306

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPENE 176
           DL++N L+ LP EI ++  L++L L  N L TL      L N  T  L+    + LP+ E
Sbjct: 307 DLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPK-E 365

Query: 177 DSEASTTKEDLITMATRLSVTSKEL----SLEGMN-----LSAIPSEIWEAGEITKLDLS 227
             E    K  L  + T+L+   KE+    +L+ +N     L+ +P EI E   +  L+L 
Sbjct: 366 IGELQNLK-TLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLL 424

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            N +  LP E+    +L+ L+L  N+I   P  I   L +L  L L  N L  +P +   
Sbjct: 425 DNQLTTLPKEIGELQNLEILVLRENRITALPKEI-GQLQNLQWLGLHQNQLTTLPKE-IG 482

Query: 288 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
            +  LQ LDL  N + +LP+      L +LQEL L   QL   P +I +LQ LR+LDL  
Sbjct: 483 QLQNLQRLDLHQNQLTTLPK--EIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDN 540

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           N L ++P+    L SL  L L  N +S LP E+G L+ +LQ L L  N L ++ + I
Sbjct: 541 NQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQ-NLQVLGLISNQLMTLPKEI 596



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 202/408 (49%), Gaps = 27/408 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N LT L    I     L EL  S N L  +P+ +G L  L RL+L+  ++ +
Sbjct: 73  LQRLDLSFNSLTTLPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTT 131

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    +  N L+ALP E+G+L  L  L L++NQL     E  QL+ L +L
Sbjct: 132 LPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQML 191

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL NN L+ LP EIG++  L++L L+ N L  L         P  +  L +    N +S+
Sbjct: 192 DLGNNQLTILPKEIGQLQNLQELYLSYNQLTIL---------PKEIGQLENLQRLNLNSQ 242

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             TT    I     L      L L   +L+ +P E+ +   + +LDL +N +  LP E+ 
Sbjct: 243 KLTTLPKEIGQLRNLQW----LDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIG 298

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD--- 296
              +LQ L L+ NK+   P  I   L +L  L L  N L  +P    K+I  LQ L    
Sbjct: 299 QLKNLQELDLNSNKLTTLPKEI-RQLRNLQELDLHRNQLTTLP----KEIGQLQNLKTLN 353

Query: 297 -LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
            +   + +LP+      L +L+ L L   QL   P +I  LQ L+ L+L    L ++P+ 
Sbjct: 354 LIVTQLTTLPK--EIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKE 411

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L +L  L+L DN ++ LP E+G L+ +L+ L L  N + ++ + I
Sbjct: 412 IGELQNLKTLNLLDNQLTTLPKEIGELQ-NLEILVLRENRITALPKEI 458



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 121/379 (31%), Positives = 191/379 (50%), Gaps = 19/379 (5%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ IG L  L RLDL  N + ++P  I    +L E  +  N+L+ LP E+G+L  L  L
Sbjct: 63  LPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 122

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           +L+S +L     E  QL+ L +L L  N L+ LP EIG++  L+ L L  N L TL + +
Sbjct: 123 NLNSQKLTTLPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEI 182

Query: 157 VNGPTPALLKYLRSRLP--ENEDSEASTTKEDLITMATRLSVTSKE---------LSLEG 205
                  +L    ++L     E  +    +E L     +L++  KE         L+L  
Sbjct: 183 RQLKNLQMLDLGNNQLTILPKEIGQLQNLQE-LYLSYNQLTILPKEIGQLENLQRLNLNS 241

Query: 206 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 265
             L+ +P EI +   +  LDLS NS+  LP E+    +LQ L L +N++   P  I   L
Sbjct: 242 QKLTTLPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEI-GQL 300

Query: 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 324
            +L  L L++N L  +P +  + +  LQ LDL  N + +LP+      L +L+ L L   
Sbjct: 301 KNLQELDLNSNKLTTLPKE-IRQLRNLQELDLHRNQLTTLPK--EIGQLQNLKTLNLIVT 357

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
           QL   P +I  LQ L+ L+L    L ++P+    L +L  L+L    ++ LP E+G L+ 
Sbjct: 358 QLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQ- 416

Query: 385 SLQALRLDGNPLRSIRRTI 403
           +L+ L L  N L ++ + I
Sbjct: 417 NLKTLNLLDNQLTTLPKEI 435



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 161/335 (48%), Gaps = 42/335 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL   ++  +P  I    +L    +  N+L+ LP E+G+L  L  LDL  N L     E
Sbjct: 53  LDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL  L  L+L++  L+ LP EIG++  L+ L+L  N L  L         P  +  L+
Sbjct: 113 VGQLENLQRLNLNSQKLTTLPKEIGQLKNLQLLILYYNQLTAL---------PKEIGQLK 163

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           +                            K L L    L+ +P+EI +   +  LDL  N
Sbjct: 164 N---------------------------LKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNN 196

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP E+    +LQ L LS N++   P  I   L +L  L L++  L  +P +    +
Sbjct: 197 QLTILPKEIGQLQNLQELYLSYNQLTILPKEI-GQLENLQRLNLNSQKLTTLPKE-IGQL 254

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ LDLS+N + +LP+      L +LQ L L + +L   P +I +L+ L+ LDL+ N 
Sbjct: 255 RNLQWLDLSFNSLTTLPK--EVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNK 312

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
           L ++P+  + L +L ELDL  N ++ LP E+G L+
Sbjct: 313 LTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 347



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 123/229 (53%), Gaps = 8/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+SE+ T  +   T+   L V  + L L    L+ +P EI +   + +LDLS NS+  LP
Sbjct: 30  EESESGTYTDLAKTLQNPLKV--RTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTTLP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L LS N +   P  +   L +L  L L++  L  +P +    +  LQ+L
Sbjct: 88  KEIGQLRNLQELDLSFNSLTTLPKEV-GQLENLQRLNLNSQKLTTLPKE-IGQLKNLQLL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L YN + +LP+      L +L+ L+L   QL   PT+I +L+ L++LDL  N L  +P+
Sbjct: 146 ILYYNQLTALPK--EIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L EL LS N ++ LP E+G LE +LQ L L+   L ++ + I
Sbjct: 204 EIGQLQNLQELYLSYNQLTILPKEIGQLE-NLQRLNLNSQKLTTLPKEI 251


>gi|410967549|ref|XP_003990281.1| PREDICTED: leucine-rich repeat-containing protein 40 [Felis catus]
          Length = 592

 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 147/475 (30%), Positives = 230/475 (48%), Gaps = 87/475 (18%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+LT +       +  L +L  S N L  +P +  SLS L+RL+L  N++ S+P+
Sbjct: 146 LYLQHNELTCIPEGFEQLFN-LEDLDLSNNRLTTVPASFCSLSSLVRLNLSSNQLKSLPA 204

Query: 64  SISG---------------------------------------------CCSLAEFYMGN 78
            ISG                                             C  L E ++G 
Sbjct: 205 EISGMKRLKHLDCNSNFLETVPPELANMESLELLYLRRNKLRFLPEFPSCRLLKELHVGE 264

Query: 79  NALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           N +  L P  L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP  +GK+
Sbjct: 265 NQIEMLGPEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGKL 324

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRL 194
             L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++E S++    E  +T+   +R+
Sbjct: 325 -HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDEPSQSDPVTETAMTLPSESRV 383

Query: 195 S----VTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTL 247
           +    VT K L       + IP E+++A +   +T ++ S+N + E+P  +     + + 
Sbjct: 384 NVHAIVTLKILDYSDKQTTLIPDEVFDAVKSNIVTSVNFSKNQLCEIPKRIVELKEMVSD 443

Query: 248 I-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 306
           + LS N++       L  L  L+ L L NN L  +P +  + +  LQ ++LS+N      
Sbjct: 444 VNLSFNRLSSI-SLDLCMLQKLTFLDLRNNFLNSLPEE-MESLIRLQTINLSFN------ 495

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTEL 365
              F  LP +         L   PT       L  + +S N + S+ P+  K +  L  L
Sbjct: 496 --RFKILPEV---------LYHIPT-------LETILISNNQVGSVDPQKMKAMEKLITL 537

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           DL +N++  +PPELG    +L+ L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 538 DLQNNDLLQIPPELGNC-VNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 591



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/226 (38%), Positives = 129/226 (57%), Gaps = 9/226 (3%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           K L L+   L+ IP    +   +  LDLS N +  +P    S +SL  L LS N++K  P
Sbjct: 144 KGLYLQHNELTCIPEGFEQLFNLEDLDLSNNRLTTVPASFCSLSSLVRLNLSSNQLKSLP 203

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
            A ++ +  L  L  ++N L  VP +   ++  L++L L  N +  LPE   F S   L+
Sbjct: 204 -AEISGMKRLKHLDCNSNFLETVPPE-LANMESLELLYLRRNKLRFLPE---FPSCRLLK 258

Query: 318 ELYLRRMQLRE-APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           EL++   Q+    P  +  L  + +LDL  N L+S+P+    L SL  LDLS+N+IS+LP
Sbjct: 259 ELHVGENQIEMLGPEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLP 318

Query: 377 PELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
             LG L   L+ L L+GNPLR+IRR I+++GT+ VLKYL+ KI ++
Sbjct: 319 CSLGKLH--LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDD 362



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 89/175 (50%), Gaps = 2/175 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ ++   N+L  +   ++    M++++  S N L+ +   +  L +L  LDL  N + S
Sbjct: 417 VTSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNRLSSISLDLCMLQKLTFLDLRNNFLNS 476

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSV 118
           +P  +     L    +  N    LP  L  +  L T+ + +NQ+     +  +   +L  
Sbjct: 477 LPEEMESLIRLQTINLSFNRFKILPEVLYHIPTLETILISNNQVGSVDPQKMKAMEKLIT 536

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 537 LDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 591



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 83/145 (57%), Gaps = 5/145 (3%)

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
           D+   IL   S+++  ++ +N L  +PS   +++  LQ L++S+N +  LP+    ++L 
Sbjct: 85  DFKSTILFMYSNVTMTQIHDNQLTSLPS-AIRELENLQKLNVSHNKLQILPKE--ITNLR 141

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           +L+ LYL+  +L   P    +L  L  LDLS N L ++P  F +L+SL  L+LS N + +
Sbjct: 142 NLKGLYLQHNELTCIPEGFEQLFNLEDLDLSNNRLTTVPASFCSLSSLVRLNLSSNQLKS 201

Query: 375 LPPELGLLEPSLQALRLDGNPLRSI 399
           LP E+  ++  L+ L  + N L ++
Sbjct: 202 LPAEISGMK-RLKHLDCNSNFLETV 225


>gi|405971281|gb|EKC36127.1| Leucine-rich repeat-containing protein 40 [Crassostrea gigas]
          Length = 606

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 137/436 (31%), Positives = 211/436 (48%), Gaps = 49/436 (11%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           K +V  N+L+ L    I S   L  L  + N L  +PE +G+L  L +L L  N++  IP
Sbjct: 199 KFNVSNNRLSSLPPE-IGSMNALKCLDVTHNQLTHLPEDLGNLPNLEQLYLRHNQLSGIP 257

Query: 63  SSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLD 120
             +  C +L E ++GNN +  + AE L  L  +  LD+  N++ E   E  C   L  LD
Sbjct: 258 L-LKNCKNLKEIHLGNNQIRKITAEHLQHLESVTVLDIRDNKISELPEEITCLSGLQRLD 316

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL-------P 173
           L+NN L+GLP  +G +T+L+ ++L GNP++++R  ++   T  L KYL SR+       P
Sbjct: 317 LTNNDLTGLPFVLGTITSLKSIVLDGNPMKSIRRDIIMRGTVELKKYLCSRIEDPQPVEP 376

Query: 174 ENEDSEASTTKEDLITMATRLSV----TSKELSLEGMNLSAIPSEIWEAG---EITKLDL 226
            N+  +       +      L       SK L       +A+P +IWE      +T ++L
Sbjct: 377 TNKGIQNGGDTGIVGGSGEGLKAHDIQQSKSLDYSNKKATAVPDDIWEVAMKAGVTSVNL 436

Query: 227 SRNSIQELPPELSSCAS-LQTLILSRNKI-KDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           S+N   +LP  L    S L+      NK+ K  PD  L     L+ L L NN L  +P D
Sbjct: 437 SKNQFTDLPSNLILLESTLKEFNFGFNKLTKLNPDISL--FLRLTTLDLRNNGLSDLPRD 494

Query: 285 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
                                      SL  ++E+ L   +    P+ +  +++L I+  
Sbjct: 495 -------------------------MESLQDMREIVLSCNRFTTLPSSLYEMKKLEIIFA 529

Query: 345 SQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             N + +I   GFKNL  L  LDL +NNI  +PPELG     +++L L+GN  R+ R  I
Sbjct: 530 DNNKITTIDAAGFKNLPMLATLDLQNNNIDQVPPELGNC-TQIKSLLLNGNAFRNPRPAI 588

Query: 404 LDRGTKAVLKYLKDKI 419
           L +GT A+L+YL+ +I
Sbjct: 589 LTKGTLALLEYLRSRI 604



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 166/332 (50%), Gaps = 43/332 (12%)

Query: 92  SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
           ++L  L L SN L E   E    + LSVLD+ +N L  LP  I ++  L KL ++ N L+
Sbjct: 80  TELTKLILASNLLTEISQEISNFQALSVLDIHDNRLESLPQSIRELENLVKLDVSRNKLK 139

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
            L         P  + YLR+                            + L +E   L  
Sbjct: 140 EL---------PESVTYLRNL---------------------------RSLHVEYNELVR 163

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +   I    ++  LDLS N + ELPP++     +    +S N++   P  I  S+++L C
Sbjct: 164 VSEGIGHLDKLEDLDLSNNQLSELPPQVGHLYHVLKFNVSNNRLSSLPPEI-GSMNALKC 222

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 330
           L + +N L  +P D   ++P L+ L L +N   L   P   +  +L+E++L   Q+R+  
Sbjct: 223 LDVTHNQLTHLPED-LGNLPNLEQLYLRHN--QLSGIPLLKNCKNLKEIHLGNNQIRKIT 279

Query: 331 TDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
            + L+ L+ + +LD+  N +  +PE    L+ L  LDL++N+++ LP  LG +  SL+++
Sbjct: 280 AEHLQHLESVTVLDIRDNKISELPEEITCLSGLQRLDLTNNDLTGLPFVLGTI-TSLKSI 338

Query: 390 RLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
            LDGNP++SIRR I+ RGT  + KYL  +I +
Sbjct: 339 VLDGNPMKSIRRDIIMRGTVELKKYLCSRIED 370



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 196/416 (47%), Gaps = 52/416 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++KL +  N LT +S   I+++  L+ L    N L  +P++I  L  L++LD+ +N++  
Sbjct: 82  LTKLILASNLLTEISQE-ISNFQALSVLDIHDNRLESLPQSIRELENLVKLDVSRNKLKE 140

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S++   +L   ++  N L  +   +G L KL  LDL +NQL E   +   L  +   
Sbjct: 141 LPESVTYLRNLRSLHVEYNELVRVSEGIGHLDKLEDLDLSNNQLSELPPQVGHLYHVLKF 200

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR----SRLPEN 175
           ++SNN LS LPPEIG M  L+ L +T N L  L   L N P    L YLR    S +P  
Sbjct: 201 NVSNNRLSSLPPEIGSMNALKCLDVTHNQLTHLPEDLGNLPNLEQL-YLRHNQLSGIP-- 257

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQEL 234
                      L+     L    KE+ L    +  I +E  +  E +T LD+  N I EL
Sbjct: 258 -----------LLKNCKNL----KEIHLGNNQIRKITAEHLQHLESVTVLDIRDNKISEL 302

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P E++  + LQ L L+ N +   P  +L +++SL  + LD NP++ +     +DI M   
Sbjct: 303 PEEITCLSGLQRLDLTNNDLTGLP-FVLGTITSLKSIVLDGNPMKSIR----RDIIMRGT 357

Query: 295 LDLSYNIASLPENP-PFSSLPHLQELYLRRMQLREAPTDIL----------RLQQLRILD 343
           ++L   + S  E+P P        E   + +Q     T I+           +QQ + LD
Sbjct: 358 VELKKYLCSRIEDPQPV-------EPTNKGIQ-NGGDTGIVGGSGEGLKAHDIQQSKSLD 409

Query: 344 LSQNSLQSIPEGFKNL---TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            S     ++P+    +     +T ++LS N  + LP  L LLE +L+      N L
Sbjct: 410 YSNKKATAVPDDIWEVAMKAGVTSVNLSKNQFTDLPSNLILLESTLKEFNFGFNKL 465



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 6/176 (3%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ +++  N+ T L +NLI   + L E     N L  +   I    RL  LDL  N +  
Sbjct: 431 VTSVNLSKNQFTDLPSNLILLESTLKEFNFGFNKLTKLNPDISLFLRLTTLDLRNNGLSD 490

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----L 116
           +P  +     + E  +  N  + LP+ L ++ KL  +   +N++    ++A   +    L
Sbjct: 491 LPRDMESLQDMREIVLSCNRFTTLPSSLYEMKKLEIIFADNNKIT--TIDAAGFKNLPML 548

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 172
           + LDL NN++  +PPE+G  T ++ LLL GN  R  R +++   T ALL+YLRSR+
Sbjct: 549 ATLDLQNNNIDQVPPELGNCTQIKSLLLNGNAFRNPRPAILTKGTLALLEYLRSRI 604



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 29/226 (12%)

Query: 198 SKELSLEGMNLSAIPSEIW-----------------------EAGEITKLDLSRNSIQEL 234
           + +L+L G NLS +P  +W                       E  E+TKL L+ N + E+
Sbjct: 36  TGQLNLSGRNLSTVPDTVWRLNLDVPEEARDVSLDNTDERWWEQTELTKLILASNLLTEI 95

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
             E+S+  +L  L +  N+++  P +I   L +L  L +  N L+++P +    +  L+ 
Sbjct: 96  SQEISNFQALSVLDIHDNRLESLPQSI-RELENLVKLDVSRNKLKELP-ESVTYLRNLRS 153

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           L + YN +  + E      L  L++L L   QL E P  +  L  +   ++S N L S+P
Sbjct: 154 LHVEYNELVRVSEG--IGHLDKLEDLDLSNNQLSELPPQVGHLYHVLKFNVSNNRLSSLP 211

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
               ++ +L  LD++ N ++ LP +LG L P+L+ L L  N L  I
Sbjct: 212 PEIGSMNALKCLDVTHNQLTHLPEDLGNL-PNLEQLYLRHNQLSGI 256


>gi|403339641|gb|EJY69086.1| hypothetical protein OXYTRI_10295 [Oxytricha trifallax]
          Length = 809

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 135/434 (31%), Positives = 227/434 (52%), Gaps = 39/434 (8%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRILSI 61
           KLD+E N+LT + +N  +S T LT L  SKN +  + +  + +L+ L+ LD+HQN++ + 
Sbjct: 188 KLDLEDNQLTRV-DNFFSSLTTLTHLNLSKNKITQIDQDALANLTNLVELDMHQNQMRTF 246

Query: 62  PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 120
            SS+     L    +  N +  +   L + + L  LDLH+N+L+E+      L+ L  L 
Sbjct: 247 -SSVPNSFKLDSLALAYNFIEQI-QNLDRAANLSVLDLHNNKLEEFPESIIDLKNLKTLK 304

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           +SNN+LS + P I  +  L ++ + GNPL+ ++S++ N     L KYL+ RL + E    
Sbjct: 305 ISNNNLSDINPRISLLPVLVRITIEGNPLKCIKSTMRNAGADQLKKYLKMRLDDGE---- 360

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
              +E+   +  ++   SK+           P +I     I+  +LS N+  +LP ++  
Sbjct: 361 VQIEENKQAVIKQIPGASKDFD---------PWDILLREFISNTNLSENAFTDLPEDIIL 411

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK----DIPMLQILD 296
             +L+ L +  NK+K+     L  + SL  ++  NN L +   D       ++P L  L 
Sbjct: 412 LKNLKQLRVQNNKLKN-LPLNLLKMQSLQSIQFANNQLIRFYDDSISRQEVNLPNLTFLS 470

Query: 297 L-SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ--QLRILDLSQNSLQSIP 353
           L + NI  +P  P    LP LQ+L+L   ++ +   ++ R Q  QL +LDL  N L+ IP
Sbjct: 471 LNANNITQVP--PILKYLPKLQQLHLHMNKISDV-KELCRKQFKQLEVLDLGNNKLREIP 527

Query: 354 EGFKNLTSLTEL------DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
               +      L      D+SD  I    P L  +  +++ +++DGNPL+SIRR I+++G
Sbjct: 528 IALIHYCENLTLLNLQNNDISDRGI----PNLIGIHKNIKTIQIDGNPLKSIRRAIIEKG 583

Query: 408 TKAVLKYLKDKIPE 421
           T+A+LKYL+DK  E
Sbjct: 584 TEAILKYLRDKFVE 597



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 192/455 (42%), Gaps = 77/455 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG----MPETIGSLSRLIRLDLHQN 56
           + K+D+  N++  +   + A      E IA  N+ N     +P  + +L  L  LDL  N
Sbjct: 71  LQKIDLSNNEIPEIPEEISAQ-----EFIAWFNISNNKIEIVPNGLLALKTLKFLDLSYN 125

Query: 57  RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLR 115
           +I  +P +I+   +L EF++  N L  LP  +G L  L  LD+  N+L+   +E  C  R
Sbjct: 126 KIKILPEAIAMTEALVEFHVAGNMLIELPRSIGDLKNLEILDIKKNKLQYLPIEFGCLPR 185

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           +  LDL +N L+ +      +TTL  L L+ N +  +    +   T  +   +       
Sbjct: 186 ILKLDLEDNQLTRVDNFFSSLTTLTHLNLSKNKITQIDQDALANLTNLVELDMHQNQMRT 245

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
             S  ++ K D + +A       + L                A  ++ LDL  N ++E P
Sbjct: 246 FSSVPNSFKLDSLALAYNFIEQIQNLD--------------RAANLSVLDLHNNKLEEFP 291

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL-------RQVPSDGFKD 288
             +    +L+TL +S N + D    I + L  L  + ++ NPL       R   +D  K 
Sbjct: 292 ESIIDLKNLKTLKISNNNLSDINPRI-SLLPVLVRITIEGNPLKCIKSTMRNAGADQLKK 350

Query: 289 IPMLQILDLSYNI-------------------------------ASLPENPPFSSLP--- 314
              +++ D    I                                +L EN  F+ LP   
Sbjct: 351 YLKMRLDDGEVQIEENKQAVIKQIPGASKDFDPWDILLREFISNTNLSEN-AFTDLPEDI 409

Query: 315 ----HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL-----QSIPEGFKNLTSLTEL 365
               +L++L ++  +L+  P ++L++Q L+ +  + N L      SI     NL +LT L
Sbjct: 410 ILLKNLKQLRVQNNKLKNLPLNLLKMQSLQSIQFANNQLIRFYDDSISRQEVNLPNLTFL 469

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIR 400
            L+ NNI+ +PP L  L P LQ L L  N +  ++
Sbjct: 470 SLNANNITQVPPILKYL-PKLQQLHLHMNKISDVK 503



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 105/244 (43%), Gaps = 43/244 (17%)

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI------------WEAGEI 221
           +N  ++AS T    +  A + +  +  L +    L A P EI            W+  ++
Sbjct: 14  QNAKAQASGTT--FLEGALKRAKQNGTLIIADRQLKAFPGEILKFSELQITENWWDTFDL 71

Query: 222 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
            K+DLS N I E+P E+S+   +    +S NKI+  P+ +L                   
Sbjct: 72  QKIDLSNNEIPEIPEEISAQEFIAWFNISNNKIEIVPNGLLA------------------ 113

Query: 282 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
                  +  L+ LDLSYN I  LPE    +    L E ++    L E P  I  L+ L 
Sbjct: 114 -------LKTLKFLDLSYNKIKILPE--AIAMTEALVEFHVAGNMLIELPRSIGDLKNLE 164

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIR 400
           ILD+ +N LQ +P  F  L  + +LDL DN ++ +      L  +L  L L  N +  I 
Sbjct: 165 ILDIKKNKLQYLPIEFGCLPRILKLDLEDNQLTRVDNFFSSL-TTLTHLNLSKNKITQID 223

Query: 401 RTIL 404
           +  L
Sbjct: 224 QDAL 227



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 11/145 (7%)

Query: 44  SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSN 102
           +L  L  L L+ N I  +P  +     L + ++  N +S +     K   +L  LDL +N
Sbjct: 462 NLPNLTFLSLNANNITQVPPILKYLPKLQQLHLHMNKISDVKELCRKQFKQLEVLDLGNN 521

Query: 103 QLKE-------YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
           +L+E       YC     L L   D+S+    G+P  IG    ++ + + GNPL+++R +
Sbjct: 522 KLREIPIALIHYCENLTLLNLQNNDISD---RGIPNLIGIHKNIKTIQIDGNPLKSIRRA 578

Query: 156 LVNGPTPALLKYLRSRLPENEDSEA 180
           ++   T A+LKYLR +  E  DS+ 
Sbjct: 579 IIEKGTEAILKYLRDKFVEERDSQV 603


>gi|421113137|ref|ZP_15573589.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           JET]
 gi|410801511|gb|EKS07677.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           JET]
          Length = 444

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 138/389 (35%), Positives = 198/389 (50%), Gaps = 23/389 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  S N L  +P+ IG L +L +L+L +NR+ ++P  I    +L E ++ N
Sbjct: 75  IGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELHLEN 134

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKM 136
           N L+ LP E+GKL  L  L+L  NQL      +E  Q +L  L L +N L+ LP EIGK+
Sbjct: 135 NQLTTLPEEIGKLQNLQELNLGFNQLTALPKGIEKLQ-KLQELHLYSNRLANLPEEIGKL 193

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L+KL L  N L  L   +       L K  +  L  N  +      E L  +      
Sbjct: 194 QNLQKLNLGVNQLTALPKGI-----EKLQKLQQLYLYSNRLTNLPEEIEKLQNL------ 242

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             ++L LEG  L+ +  EI +   +  L L  N +  LP E+     LQTL L  +++  
Sbjct: 243 --RDLYLEGNQLTTLSKEIGKLQNLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEGSQLTT 300

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
            P  I   L +L  L L+NN L  +P  G + +  LQ L LS N + +LPE      L  
Sbjct: 301 LPKGI-EKLQNLRDLYLENNQLTTLPK-GIEKLQNLQELYLSSNKLTTLPE--EIEKLQK 356

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           LQ L L + +L   P +I +LQ+LR L L  N L+++PE   NL SL  L+L  N++++ 
Sbjct: 357 LQRLDLSKNKLTTLPKEIGKLQKLRGLYLDHNQLKTLPEEIGNLQSLESLNLRGNSLTSF 416

Query: 376 PPELGLLEPSLQALRLDGNP-LRSIRRTI 403
           P E+G L+  LQ L L GNP LRS +  I
Sbjct: 417 PEEIGKLQ-KLQQLYLGGNPFLRSQKEKI 444



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 166/350 (47%), Gaps = 41/350 (11%)

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 136
           N+ L  LP E+GKL  L  LDL SNQL     E  +L +L  L+L+ N L+ LP EIGK+
Sbjct: 65  NDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKL 124

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L++L L  N L TL         P  +  L++    N      T     I    +L  
Sbjct: 125 QNLQELHLENNQLTTL---------PEEIGKLQNLQELNLGFNQLTALPKGIEKLQKL-- 173

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             +EL L    L+ +P EI +   + KL+L  N +  LP  +     LQ L L  N++ +
Sbjct: 174 --QELHLYSNRLANLPEEIGKLQNLQKLNLGVNQLTALPKGIEKLQKLQQLYLYSNRLTN 231

Query: 257 WPDAI---------------LTSLS-------SLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
            P+ I               LT+LS       +L  L L  N L  +P +    +  LQ 
Sbjct: 232 LPEEIEKLQNLRDLYLEGNQLTTLSKEIGKLQNLRDLYLGGNQLTTLPKE-IGKLQKLQT 290

Query: 295 LDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           L L    + +LP+      L +L++LYL   QL   P  I +LQ L+ L LS N L ++P
Sbjct: 291 LHLEGSQLTTLPKG--IEKLQNLRDLYLENNQLTTLPKGIEKLQNLQELYLSSNKLTTLP 348

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           E  + L  L  LDLS N ++ LP E+G L+  L+ L LD N L+++   I
Sbjct: 349 EEIEKLQKLQRLDLSKNKLTTLPKEIGKLQ-KLRGLYLDHNQLKTLPEEI 397



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 72/152 (47%), Gaps = 25/152 (16%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L +E N+LT L    I     L EL  S N L  +PE I  L +L RLDL +N++ ++P 
Sbjct: 314 LYLENNQLTTLPKG-IEKLQNLQELYLSSNKLTTLPEEIEKLQKLQRLDLSKNKLTTLPK 372

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I     L   Y+ +N L  LP E+G L  L +L+L                        
Sbjct: 373 EIGKLQKLRGLYLDHNQLKTLPEEIGNLQSLESLNLRG---------------------- 410

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
           NSL+  P EIGK+  L++L L GNP   LRS 
Sbjct: 411 NSLTSFPEEIGKLQKLQQLYLGGNPF--LRSQ 440


>gi|149026334|gb|EDL82577.1| similar to hypothetical protein FLJ20331, isoform CRA_c [Rattus
           norvegicus]
          Length = 479

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 136/415 (32%), Positives = 209/415 (50%), Gaps = 42/415 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+    L  L    NLL  +P  +GS+  L  L L +N++  +P     C  L E Y+  
Sbjct: 93  ISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELYLAE 151

Query: 79  NALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           N +  L AE L  L  +  LDL SN+L+    E   L+ L  LDLSNN +S LP  +G +
Sbjct: 152 NQIEKLGAEHLQHLQAILVLDLRSNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL 211

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L+ L L GNPLRT+R  ++   T  +LKYLRS++ ++  ++  +  E  +T+ +   V
Sbjct: 212 H-LKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARV 270

Query: 197 ------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTL 247
                 T K L       + IP +I++A +   +T ++ S+N + E+P  +   A L+ +
Sbjct: 271 NIHAIVTLKLLDYSDKQATLIPDDIFDATKNTVVTSINFSKNQLCEIPQRI---AELKEM 327

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
           +L  N           S + LS +           S     +  L  LDL  N ++SLPE
Sbjct: 328 VLDVN----------LSFNKLSLV-----------SHELCLLQKLAFLDLRNNFLSSLPE 366

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTEL 365
               SSL  LQ + L   + +  P  +  +  L  + +S N + S+ P   K + +L+ L
Sbjct: 367 E--MSSLTKLQTINLSFNRFKVFPAVLYHISTLETILISNNQVGSVDPLKMKLMENLSTL 424

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           DL +N++  +PPELG     L+ L LDGNP R  R  IL +GT AVL+YL+D+IP
Sbjct: 425 DLQNNDLLQIPPELGNC-VQLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 478



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 130/226 (57%), Gaps = 9/226 (3%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           K L L+   L+ IP        +  LDLS N +  +P + +  ++L  L LS N++K+ P
Sbjct: 31  KALHLQHNELTCIPEGFEHLSSLEDLDLSSNRLATVPADFALLSNLLRLNLSSNQLKNLP 90

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
            A ++ +  L  L  D N L  VP D    +  L++L L  N +  LPE   F S   L+
Sbjct: 91  -AEISRMKRLKHLDCDANLLETVPPD-VGSMESLELLYLRRNKLRVLPE---FPSCRQLK 145

Query: 318 ELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           ELYL   Q+ +   + L+ LQ + +LDL  N L+S+PE    L SL  LDLS+N+IS+LP
Sbjct: 146 ELYLAENQIEKLGAEHLQHLQAILVLDLRSNKLRSVPEEMALLQSLERLDLSNNDISSLP 205

Query: 377 PELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
             LG L   L+ L L+GNPLR+IRR I+ +GT+ VLKYL+ KI ++
Sbjct: 206 CSLGNLH--LKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDD 249



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 28/198 (14%)

Query: 4   LDVEGNKLTVLSNNLIASW--TMLTELIASKNLLNGMPETIGSLSRLI-RLDLHQNRILS 60
           LD    + T++ +++  +   T++T +  SKN L  +P+ I  L  ++  ++L  N++  
Sbjct: 281 LDYSDKQATLIPDDIFDATKNTVVTSINFSKNQLCEIPQRIAELKEMVLDVNLSFNKLSL 340

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY------------- 107
           +   +     LA   + NN LS+LP E+  L+KL T++L  N+ K +             
Sbjct: 341 VSHELCLLQKLAFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVFPAVLYHISTLETI 400

Query: 108 --------CVEACQLRL----SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
                    V+  +++L    S LDL NN L  +PPE+G    LR LLL GNP R  R++
Sbjct: 401 LISNNQVGSVDPLKMKLMENLSTLDLQNNDLLQIPPELGNCVQLRTLLLDGNPFRVPRAA 460

Query: 156 LVNGPTPALLKYLRSRLP 173
           ++   T A+L+YLR R+P
Sbjct: 461 ILMKGTAAVLEYLRDRIP 478



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 39/62 (62%)

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L+L   +L+  P +I  L+ L+ L L  N L  IPEGF++L+SL +LDLS N ++ +P +
Sbjct: 10  LFLIHNKLKMLPEEITSLKNLKALHLQHNELTCIPEGFEHLSSLEDLDLSSNRLATVPAD 69

Query: 379 LG 380
             
Sbjct: 70  FA 71


>gi|149026333|gb|EDL82576.1| similar to hypothetical protein FLJ20331, isoform CRA_b [Rattus
           norvegicus]
          Length = 602

 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 136/415 (32%), Positives = 209/415 (50%), Gaps = 42/415 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+    L  L    NLL  +P  +GS+  L  L L +N++  +P     C  L E Y+  
Sbjct: 216 ISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELYLAE 274

Query: 79  NALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           N +  L AE L  L  +  LDL SN+L+    E   L+ L  LDLSNN +S LP  +G +
Sbjct: 275 NQIEKLGAEHLQHLQAILVLDLRSNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL 334

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L+ L L GNPLRT+R  ++   T  +LKYLRS++ ++  ++  +  E  +T+ +   V
Sbjct: 335 H-LKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARV 393

Query: 197 ------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTL 247
                 T K L       + IP +I++A +   +T ++ S+N + E+P  +   A L+ +
Sbjct: 394 NIHAIVTLKLLDYSDKQATLIPDDIFDATKNTVVTSINFSKNQLCEIPQRI---AELKEM 450

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
           +L  N           S + LS +           S     +  L  LDL  N ++SLPE
Sbjct: 451 VLDVN----------LSFNKLSLV-----------SHELCLLQKLAFLDLRNNFLSSLPE 489

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTEL 365
               SSL  LQ + L   + +  P  +  +  L  + +S N + S+ P   K + +L+ L
Sbjct: 490 E--MSSLTKLQTINLSFNRFKVFPAVLYHISTLETILISNNQVGSVDPLKMKLMENLSTL 547

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           DL +N++  +PPELG     L+ L LDGNP R  R  IL +GT AVL+YL+D+IP
Sbjct: 548 DLQNNDLLQIPPELGNC-VQLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 601



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/309 (35%), Positives = 160/309 (51%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  I ++  L+KL ++ N L+ L                    PE 
Sbjct: 107 LTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKML--------------------PEE 146

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                       IT    L    K L L+   L+ IP        +  LDLS N +  +P
Sbjct: 147 ------------ITSLKNL----KALHLQHNELTCIPEGFEHLSSLEDLDLSSNRLATVP 190

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            + +  ++L  L LS N++K+ P A ++ +  L  L  D N L  VP D    +  L++L
Sbjct: 191 ADFALLSNLLRLNLSSNQLKNLP-AEISRMKRLKHLDCDANLLETVPPD-VGSMESLELL 248

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+ELYL   Q+ +   + L+ LQ + +LDL  N L+S+P
Sbjct: 249 YLRRNKLRVLPE---FPSCRQLKELYLAENQIEKLGAEHLQHLQAILVLDLRSNKLRSVP 305

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           E    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+ +GT+ VLK
Sbjct: 306 EEMALLQSLERLDLSNNDISSLPCSLGNLH--LKFLALEGNPLRTIRREIIAKGTQEVLK 363

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 364 YLRSKIKDD 372



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 28/198 (14%)

Query: 4   LDVEGNKLTVLSNNLIASW--TMLTELIASKNLLNGMPETIGSLSRLI-RLDLHQNRILS 60
           LD    + T++ +++  +   T++T +  SKN L  +P+ I  L  ++  ++L  N++  
Sbjct: 404 LDYSDKQATLIPDDIFDATKNTVVTSINFSKNQLCEIPQRIAELKEMVLDVNLSFNKLSL 463

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY------------- 107
           +   +     LA   + NN LS+LP E+  L+KL T++L  N+ K +             
Sbjct: 464 VSHELCLLQKLAFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVFPAVLYHISTLETI 523

Query: 108 --------CVEACQLRL----SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
                    V+  +++L    S LDL NN L  +PPE+G    LR LLL GNP R  R++
Sbjct: 524 LISNNQVGSVDPLKMKLMENLSTLDLQNNDLLQIPPELGNCVQLRTLLLDGNPFRVPRAA 583

Query: 156 LVNGPTPALLKYLRSRLP 173
           ++   T A+L+YLR R+P
Sbjct: 584 ILMKGTAAVLEYLRDRIP 601



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 169/385 (43%), Gaps = 72/385 (18%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +L +  + +N
Sbjct: 79  WEQTDLTKLIISSNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHN 138

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV---LDLSNNSLSGLPPEIGKM 136
            L  LP E+  L  L  L L  N+L   C+      LS    LDLS+N L+ +P +   +
Sbjct: 139 KLKMLPEEITSLKNLKALHLQHNELT--CIPEGFEHLSSLEDLDLSSNRLATVPADFALL 196

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           + L +L L+ N L+ L         PA +  ++ RL                        
Sbjct: 197 SNLLRLNLSSNQLKNL---------PAEISRMK-RL------------------------ 222

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K L  +   L  +P ++     +  L L RN ++ L PE  SC  L+ L L+ N+I+ 
Sbjct: 223 --KHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVL-PEFPSCRQLKELYLAENQIEK 279

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
                L  L ++  L L +N LR VP +    +  L+ LDLS N I+SLP      SL +
Sbjct: 280 LGAEHLQHLQAILVLDLRSNKLRSVPEE-MALLQSLERLDLSNNDISSLP-----CSLGN 333

Query: 316 LQELYL----------RRMQLREAPTDILRLQQLRILDLSQNSLQSIPE----------- 354
           L   +L          RR  + +   ++L+  + +I D   N   S+PE           
Sbjct: 334 LHLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARV 393

Query: 355 GFKNLTSLTELDLSDNNISALPPEL 379
               + +L  LD SD   + +P ++
Sbjct: 394 NIHAIVTLKLLDYSDKQATLIPDDI 418



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 28/185 (15%)

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
           +S +L+L G NL  +P  +W       +D+   + Q L               S +  + 
Sbjct: 37  SSGQLNLAGRNLGEVPQCVWRIN----VDIPEEANQNL---------------SFSSTER 77

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
           W +      + L+ L + +N L+ + SD  + +P L +LD+  N + SLP       L +
Sbjct: 78  WWEQ-----TDLTKLIISSNKLQSL-SDDLRLLPALTVLDIHDNQLTSLPS--AIRELDN 129

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           LQ+L +   +L+  P +I  L+ L+ L L  N L  IPEGF++L+SL +LDLS N ++ +
Sbjct: 130 LQKLNVSHNKLKMLPEEITSLKNLKALHLQHNELTCIPEGFEHLSSLEDLDLSSNRLATV 189

Query: 376 PPELG 380
           P +  
Sbjct: 190 PADFA 194


>gi|291224779|ref|XP_002732380.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 1162

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 220/409 (53%), Gaps = 31/409 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+  NK++ +  +L A    LTEL    N L  +P+ IG L  +  L+L  N+I  
Sbjct: 231 LQKLDLSFNKISKIPESLYA-LEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEK 289

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP+S+     L E  MG+NAL+++P E+GKL  + TLDL  N++ +     C L +L+ L
Sbjct: 290 IPASLCALEKLTELNMGSNALTSIPDEIGKLKSMETLDLSFNKIDKIPDSLCALEKLTEL 349

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL--VNGPTPALLKYLRSRLPENED 177
            +++N+L+ +P EIGK+ +++ L L+ N +  + +SL  +   T   +KY          
Sbjct: 350 YMNDNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCTLEQLTELDMKY---------- 399

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD------LSRNSI 231
             A T   D I+    +++    L+L+   +  IP  +    ++T+LD      ++ N++
Sbjct: 400 -NALTAIPDEISKLKSMNI----LNLDNNKMEKIPDSLCALQQLTELDMNDXXXMASNAL 454

Query: 232 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 291
             +P E+S   S++ L L  NK+K  P A L +L  L+ L ++ N L  +P D    +  
Sbjct: 455 TSIPDEISKLKSMKILNLDNNKMKKIP-ASLCALQQLTELYMNGNALTSIP-DEISKLKS 512

Query: 292 LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
           ++IL+L +N I  +P++    +L  L EL +    L   P +I +L+ ++IL+L  N ++
Sbjct: 513 MKILNLYFNKIDKIPDS--LCALEKLTELNMASNALTSIPDEISKLKSMKILNLDNNKMK 570

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            IP     L  LTEL ++ N ++++P E+G L+ S++ L L  N +  I
Sbjct: 571 KIPASLCALQQLTELYMNGNALTSIPDEIGKLK-SMETLNLSFNKIEKI 618



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 226/421 (53%), Gaps = 25/421 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M  L++  NK+  +  +L A    LTEL    N L  +P+ IG L  +  LDL  N+I  
Sbjct: 277 MKTLNLSSNKIEKIPASLCA-LEKLTELNMGSNALTSIPDEIGKLKSMETLDLSFNKIDK 335

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP S+     L E YM +NAL+++P E+GKL  + TL+L SN++++     C L +L+ L
Sbjct: 336 IPDSLCALEKLTELYMNDNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCTLEQLTEL 395

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED-- 177
           D+  N+L+ +P EI K+ ++  L L  N +  +  SL        L+ L + L  N+   
Sbjct: 396 DMKYNALTAIPDEISKLKSMNILNLDNNKMEKIPDSL------CALQQL-TELDMNDXXX 448

Query: 178 --SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
             S A T+  D I+    + +    L+L+   +  IP+ +    ++T+L ++ N++  +P
Sbjct: 449 MASNALTSIPDEISKLKSMKI----LNLDNNKMKKIPASLCALQQLTELYMNGNALTSIP 504

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+S   S++ L L  NKI   PD+ L +L  L+ L + +N L  +P D    +  ++IL
Sbjct: 505 DEISKLKSMKILNLYFNKIDKIPDS-LCALEKLTELNMASNALTSIP-DEISKLKSMKIL 562

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           +L  N +  +P +    +L  L ELY+    L   P +I +L+ +  L+LS N ++ IP+
Sbjct: 563 NLDNNKMKKIPAS--LCALQQLTELYMNGNALTSIPDEIGKLKSMETLNLSFNKIEKIPD 620

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI--LDRGTKAVL 412
               L  LTEL++  N ++++P E+G L+ S++ L L  N +  I  ++  LD+ T+ ++
Sbjct: 621 SLCALEQLTELNMRSNALTSVPDEIGKLK-SMKTLNLSSNKIEKIPASLCALDQLTELIM 679

Query: 413 K 413
           +
Sbjct: 680 R 680



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 230/444 (51%), Gaps = 55/444 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M  LD+  NK+  + ++L A    LTEL  + N L  +P+ IG L  +  L+L  N+I  
Sbjct: 323 METLDLSFNKIDKIPDSLCA-LEKLTELYMNDNALTSVPDEIGKLKSMKTLNLSSNKIEK 381

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           IP+S+     L E  M  NAL+A+P E+ KL  +  L+L +N++++     C L+ L+ L
Sbjct: 382 IPASLCTLEQLTELDMKYNALTAIPDEISKLKSMNILNLDNNKMEKIPDSLCALQQLTEL 441

Query: 120 DLSN------NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL----------VNG---- 159
           D+++      N+L+ +P EI K+ +++ L L  N ++ + +SL          +NG    
Sbjct: 442 DMNDXXXMASNALTSIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALT 501

Query: 160 PTPALLKYLRS------------RLPE-----------NEDSEASTTKEDLITMATRLSV 196
             P  +  L+S            ++P+           N  S A T+  D I+    + +
Sbjct: 502 SIPDEISKLKSMKILNLYFNKIDKIPDSLCALEKLTELNMASNALTSIPDEISKLKSMKI 561

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
               L+L+   +  IP+ +    ++T+L ++ N++  +P E+    S++TL LS NKI+ 
Sbjct: 562 ----LNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEIGKLKSMETLNLSFNKIEK 617

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
            PD+ L +L  L+ L + +N L  VP D    +  ++ L+LS N I  +P +    +L  
Sbjct: 618 IPDS-LCALEQLTELNMRSNALTSVP-DEIGKLKSMKTLNLSSNKIEKIPAS--LCALDQ 673

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           L EL +R   L   P +I +L+ ++IL+L  N ++ IP+    L  LTELD+  N ++++
Sbjct: 674 LTELIMRSNALTAIPDEISKLKSMKILNLDNNKMEKIPDSLCALQQLTELDIRSNALTSI 733

Query: 376 PPELGLLEPSLQALRLDGNPLRSI 399
           P E+G L+ S++ L LD N +  I
Sbjct: 734 PDEIGKLK-SMKILNLDNNKMEKI 756



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 198/371 (53%), Gaps = 28/371 (7%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P  IG    L +LDL  N+I  IP S+     L E  M +NAL+++P E+GKL  + TL
Sbjct: 221 VPSEIGECHELQKLDLSFNKISKIPESLYALEQLTELNMRSNALTSVPDEIGKLKSMKTL 280

Query: 98  DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           +L SN++++     C L +L+ L++ +N+L+ +P EIGK+ ++  L L+ N +  +  SL
Sbjct: 281 NLSSNKIEKIPASLCALEKLTELNMGSNALTSIPDEIGKLKSMETLDLSFNKIDKIPDSL 340

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                 AL K     + +N    A T+  D I     +    K L+L    +  IP+ + 
Sbjct: 341 C-----ALEKLTELYMNDN----ALTSVPDEIGKLKSM----KTLNLSSNKIEKIPASLC 387

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
              ++T+LD+  N++  +P E+S   S+  L L  NK++  PD+ L +L  L+  +LD N
Sbjct: 388 TLEQLTELDMKYNALTAIPDEISKLKSMNILNLDNNKMEKIPDS-LCALQQLT--ELDMN 444

Query: 277 PLRQVPSDGFKDIP-------MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
               + S+    IP        ++IL+L  N +  +P +    +L  L ELY+    L  
Sbjct: 445 DXXXMASNALTSIPDEISKLKSMKILNLDNNKMKKIPAS--LCALQQLTELYMNGNALTS 502

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
            P +I +L+ ++IL+L  N +  IP+    L  LTEL+++ N ++++P E+  L+ S++ 
Sbjct: 503 IPDEISKLKSMKILNLYFNKIDKIPDSLCALEKLTELNMASNALTSIPDEISKLK-SMKI 561

Query: 389 LRLDGNPLRSI 399
           L LD N ++ I
Sbjct: 562 LNLDNNKMKKI 572



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 217/412 (52%), Gaps = 37/412 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTEL------IASKNLLNGMPETIGSLSRLIRLDLH 54
           M+ L+++ NK+  + ++L A    LTEL        + N L  +P+ I  L  +  L+L 
Sbjct: 415 MNILNLDNNKMEKIPDSLCA-LQQLTELDMNDXXXMASNALTSIPDEISKLKSMKILNLD 473

Query: 55  QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 114
            N++  IP+S+     L E YM  NAL+++P E+ KL  +  L+L+ N++ +     C L
Sbjct: 474 NNKMKKIPASLCALQQLTELYMNGNALTSIPDEISKLKSMKILNLYFNKIDKIPDSLCAL 533

Query: 115 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            +L+ L++++N+L+ +P EI K+ +++ L L  N ++ +         PA L  L+    
Sbjct: 534 EKLTELNMASNALTSIPDEISKLKSMKILNLDNNKMKKI---------PASLCALQQLTE 584

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS-----AIPSEIWEAGEITKLDLSR 228
              +  A T+  D I          K  S+E +NLS      IP  +    ++T+L++  
Sbjct: 585 LYMNGNALTSIPDEI---------GKLKSMETLNLSFNKIEKIPDSLCALEQLTELNMRS 635

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N++  +P E+    S++TL LS NKI+  P A L +L  L+ L + +N L  +P D    
Sbjct: 636 NALTSVPDEIGKLKSMKTLNLSSNKIEKIP-ASLCALDQLTELIMRSNALTAIP-DEISK 693

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  ++IL+L  N +  +P++    +L  L EL +R   L   P +I +L+ ++IL+L  N
Sbjct: 694 LKSMKILNLDNNKMEKIPDS--LCALQQLTELDIRSNALTSIPDEIGKLKSMKILNLDNN 751

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            ++ IP+    L  LT+L++  N ++A+P E+G L+ S+  L L  N +  I
Sbjct: 752 KMEKIPDSLCALEKLTDLNMEHNALTAIPDEIGKLK-SMTTLNLSFNKIEKI 802



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 220/498 (44%), Gaps = 98/498 (19%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
            M  L+++ NK+  +  +L A    LTEL  + N L  +P+ IG L  +  L+L  N+I  
Sbjct: 559  MKILNLDNNKMKKIPASLCA-LQQLTELYMNGNALTSIPDEIGKLKSMETLNLSFNKIEK 617

Query: 61   IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
            IP S+     L E  M +NAL+++P E+GKL  + TL+L SN++++     C L +L+ L
Sbjct: 618  IPDSLCALEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTEL 677

Query: 120  DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV------------NGPT--PALL 165
             + +N+L+ +P EI K+ +++ L L  N +  +  SL             N  T  P  +
Sbjct: 678  IMRSNALTAIPDEISKLKSMKILNLDNNKMEKIPDSLCALQQLTELDIRSNALTSIPDEI 737

Query: 166  KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
              L+S    N D+       D +    +L+    +L++E   L+AIP EI +   +T L+
Sbjct: 738  GKLKSMKILNLDNNKMEKIPDSLCALEKLT----DLNMEHNALTAIPDEIGKLKSMTTLN 793

Query: 226  LSRNSIQELPPELSSCASLQTLIL-----SRNKIKDWPDAILTSLS----SLSCLKLDNN 276
            LS N I+++P  L  CA ++ L L     + NK+K++P  ++  L     SL   KL   
Sbjct: 794  LSFNKIEKIPDSL--CAGIKKLKLIHLRLNENKLKEFPWQVIEELPLCELSLCGNKLQTV 851

Query: 277  P------LRQVPSDGFKDIPMLQI------------------------------------ 294
            P      LR  P    K + ++                                      
Sbjct: 852  PDHIGRLLRYHPCRKCKHVSLMHYRKTCIYFGYSTKWRMRRRRGMTTDLSTKDTATHVGM 911

Query: 295  -LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS-------- 345
             LDLSY      +     S  HL+ L L   +L   P++I    +L+ L+LS        
Sbjct: 912  KLDLSYGKHKSIDLSRLGSYKHLRMLNLEHGELTIVPSEIGECHKLQKLELSFNKIAKIP 971

Query: 346  ---------------QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
                            N+L SIP+    L S+  L+LS N I+ +P  L  LE  L+ L 
Sbjct: 972  DSLCALEKLTEINMGSNALTSIPDEISKLKSMKTLNLSFNKIAKIPDSLCALE-QLRILN 1030

Query: 391  LDGNPLRSIRRTILDRGT 408
            ++GN L +I    L   T
Sbjct: 1031 MNGNALTAIPSVKLQHQT 1048



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 200/442 (45%), Gaps = 71/442 (16%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
            M  L+++ NK+  + ++L A    LTEL    N L  +P+ IG L  +  L+L  N++  
Sbjct: 697  MKILNLDNNKMEKIPDSLCA-LQQLTELDIRSNALTSIPDEIGKLKSMKILNLDNNKMEK 755

Query: 61   IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY----CVEACQLRL 116
            IP S+     L +  M +NAL+A+P E+GKL  + TL+L  N++++     C    +L+L
Sbjct: 756  IPDSLCALEKLTDLNMEHNALTAIPDEIGKLKSMTTLNLSFNKIEKIPDSLCAGIKKLKL 815

Query: 117  SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL---------VNGPTPALLKY 167
              L L+ N L   P ++ +   L +L L GN L+T+   +               +L+ Y
Sbjct: 816  IHLRLNENKLKEFPWQVIEELPLCELSLCGNKLQTVPDHIGRLLRYHPCRKCKHVSLMHY 875

Query: 168  LRSRLPENEDSEASTTKEDLIT--MATRLSVTSKELSLE---GMNLSAIPSEIWEAGEIT 222
             ++ +     ++    +   +T  ++T+ + T   + L+   G + S   S +     + 
Sbjct: 876  RKTCIYFGYSTKWRMRRRRGMTTDLSTKDTATHVGMKLDLSYGKHKSIDLSRLGSYKHLR 935

Query: 223  KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
             L+L    +  +P E+  C  LQ L LS NKI   PD+ L +L  L+ + + +N L  +P
Sbjct: 936  MLNLEHGELTIVPSEIGECHKLQKLELSFNKIAKIPDS-LCALEKLTEINMGSNALTSIP 994

Query: 283  SDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 342
             D    +  ++ L+LS+N                        ++ + P  +  L+QLRIL
Sbjct: 995  -DEISKLKSMKTLNLSFN------------------------KIAKIPDSLCALEQLRIL 1029

Query: 343  DLSQNSLQSIP-------------------------EGFKNLTSLTELDLSDNNISALPP 377
            +++ N+L +IP                         E  K L  L  L L+DN +   P 
Sbjct: 1030 NMNGNALTAIPSVKLQHQTLDIDNGASVFSLCFGMSERIKKL-KLIRLQLNDNKLKEFPW 1088

Query: 378  ELGLLEPSLQALRLDGNPLRSI 399
            ++     SL  L L GN L+++
Sbjct: 1089 QIIEELHSLYKLSLCGNELQTV 1110


>gi|82240198|sp|Q7SXW3.1|LRC40_DANRE RecName: Full=Leucine-rich repeat-containing protein 40
 gi|32766407|gb|AAH55223.1| Leucine rich repeat containing 40 [Danio rerio]
          Length = 601

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 140/433 (32%), Positives = 214/433 (49%), Gaps = 42/433 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+  NKL  L    I+    L  L  S+N +  +P  +  +  L +L L  N++  
Sbjct: 197 LVKLDLSCNKLKSLPP-AISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLRY 255

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 118
           +P  +  C +L E + GNN +  L AE L  L+ L  L+L  N++K    E   L+ L  
Sbjct: 256 LPE-LPCCKTLKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLER 314

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE---- 174
           LDL+NN +S LP  +G +  L+ L L GNPLR +R  L+   T  LLKYLRSR+ E    
Sbjct: 315 LDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSRVQEPPNG 374

Query: 175 --NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRN 229
              E+ + + T      +      T K L       + IP ++++A +   +  ++ S+N
Sbjct: 375 GLKEEPKTAMTFPSQAKINVHAIKTLKTLDYSEKQDATIPDDVFDAVDGNPVANVNFSKN 434

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  +P                ++I D  D       SL+ + L  N L  +P+D F  +
Sbjct: 435 QLTAVP----------------HRIVDLKD-------SLADINLGFNKLTTIPAD-FCHL 470

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L  +DL  N + SLP       L  L+ + L   + +  P  + R+  L  + +S N 
Sbjct: 471 KQLMHIDLRNNLLISLPME--LEGLIKLRSVILSFNRFKSFPEVLYRIPSLETILISSNQ 528

Query: 349 LQSIPE-GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
           +  I     K L+ L+ LDLS+N+I  +PPELG    SL+AL LDGNP R+ R  IL +G
Sbjct: 529 VGGIDAVQMKTLSRLSTLDLSNNDIMQVPPELGNCT-SLRALMLDGNPFRNPRAAILIKG 587

Query: 408 TKAVLKYLKDKIP 420
           T AVL+YL+ +IP
Sbjct: 588 TDAVLEYLRSRIP 600



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 157/310 (50%), Gaps = 48/310 (15%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS---LVNGPTPALLKYLRSRL 172
           L VLD+ +N LS LP  IG +  L+KL+L+ N L  L S    L N     L + L  ++
Sbjct: 105 LVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTELPSGVWRLTNLRCLHLQQNLIEQI 164

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
           P            DL  +     V   EL L   +L  IP  +     + KLDLS N ++
Sbjct: 165 PR-----------DLGQL-----VNLDELDLSNNHLIDIPESLANLQNLVKLDLSCNKLK 208

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            LPP +S   +L+ L  SRN+++  P  +L  + SL  L L +N LR +P     ++P  
Sbjct: 209 SLPPAISQMKNLRMLDCSRNQMESIP-PVLAQMESLEQLYLRHNKLRYLP-----ELPCC 262

Query: 293 QILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQS 351
           + L                     +EL+    Q+     + L+ L  L +L+L  N ++S
Sbjct: 263 KTL---------------------KELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKS 301

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAV 411
           +PE    L  L  LDL++N+IS+LP  LG L P L++L L+GNPLR+IRR +L +GT  +
Sbjct: 302 LPEEITLLQGLERLDLTNNDISSLPCGLGTL-PKLKSLSLEGNPLRAIRRDLLTKGTGEL 360

Query: 412 LKYLKDKIPE 421
           LKYL+ ++ E
Sbjct: 361 LKYLRSRVQE 370


>gi|255084109|ref|XP_002508629.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
 gi|226523906|gb|ACO69887.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
          Length = 1098

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 138/398 (34%), Positives = 206/398 (51%), Gaps = 26/398 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+LT +    I   T L  L   KN L  +P  IG L+ +  L L+ N++ S+P+
Sbjct: 362 LDLNNNQLTSVPAE-IGQLTSLISLHLGKNQLTSVPAEIGQLTAMTELYLNANQLTSLPA 420

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L E Y+  N L+++PAE+G+L  L  L+L SNQL     E  QLR      LS
Sbjct: 421 EIWQLTPLTELYLYGNQLTSVPAEIGQLRSLTELNLSSNQLTNVPAEIGQLRSRREFGLS 480

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--RLPENEDSEA 180
            N L+ +P EIG++T+L +  L+GN L ++         PA +  L S  RL   ++   
Sbjct: 481 GNQLTSVPAEIGQLTSLEEFGLSGNQLTSV---------PAEIGRLTSLERLWLEDNKLT 531

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
           S   E       RL    + L L G  L+++P+E+ +   + KLDL  N +  +P E+  
Sbjct: 532 SVPAE-----IGRLRAL-EWLYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLTSVPVEVGQ 585

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             SL +L L  N++   P A +  L+SL  L L +N L  VP++ ++ +  L+ L L+ N
Sbjct: 586 LTSLMSLNLGNNRLTSVP-AEIGQLTSLWELWLHDNELTSVPAEIWQ-LTSLRELSLAVN 643

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF-KN 358
            + S+P       L  L+ L L   QL   P +I +L  L  LDL  N L S+P    + 
Sbjct: 644 QLTSVPAE--IGQLTSLKTLELGGNQLTSVPAEIGQLTSLETLDLDDNKLTSVPADILQQ 701

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           LTSL  L+L DN++++ P E+G L  SL+ L L GN L
Sbjct: 702 LTSLESLELGDNHLTSWPEEIGQL-TSLKELTLRGNKL 738



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 142/444 (31%), Positives = 216/444 (48%), Gaps = 47/444 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L V GN LT +    I   T L EL  S N L  +PE IG L+ +  L L+ N++ S
Sbjct: 267 LRELVVGGNALTSVPAE-IGLLTSLRELWLSGNRLTSVPEEIGQLTAMTELYLNANQLTS 325

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I    SL    +G N L+++PAE+ +L+ L  LDL++NQL     E  QL  L  L
Sbjct: 326 LPVEIGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTSVPAEIGQLTSLISL 385

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN--------------GPTPALL 165
            L  N L+ +P EIG++T + +L L  N L +L + +                   PA +
Sbjct: 386 HLGKNQLTSVPAEIGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYGNQLTSVPAEI 445

Query: 166 KYLRSRLPENEDS-EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
             LRS    N  S + +    ++  + +R     +E  L G  L+++P+EI +   + + 
Sbjct: 446 GQLRSLTELNLSSNQLTNVPAEIGQLRSR-----REFGLSGNQLTSVPAEIGQLTSLEEF 500

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
            LS N +  +P E+    SL+ L L  NK+   P A +  L +L  L L  N L  VP++
Sbjct: 501 GLSGNQLTSVPAEIGRLTSLERLWLEDNKLTSVP-AEIGRLRALEWLYLHGNQLTSVPAE 559

Query: 285 GFKDIPMLQILDLSYN-IASLP--------------ENPPFSSLP-------HLQELYLR 322
               +  L+ LDL +N + S+P               N   +S+P        L EL+L 
Sbjct: 560 -VGQLTSLEKLDLQHNQLTSVPVEVGQLTSLMSLNLGNNRLTSVPAEIGQLTSLWELWLH 618

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
             +L   P +I +L  LR L L+ N L S+P     LTSL  L+L  N ++++P E+G L
Sbjct: 619 DNELTSVPAEIWQLTSLRELSLAVNQLTSVPAEIGQLTSLKTLELGGNQLTSVPAEIGQL 678

Query: 383 EPSLQALRLDGNPLRSIRRTILDR 406
             SL+ L LD N L S+   IL +
Sbjct: 679 -TSLETLDLDDNKLTSVPADILQQ 701



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 130/379 (34%), Positives = 191/379 (50%), Gaps = 20/379 (5%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T L EL+   N L  +P  IG L+ L  L L  NR+ S+P  I    ++ E Y+  N L+
Sbjct: 265 TALRELVVGGNALTSVPAEIGLLTSLRELWLSGNRLTSVPEEIGQLTAMTELYLNANQLT 324

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 141
           +LP E+G+L  L  L L  NQL     E  QL  L  LDL+NN L+ +P EIG++T+L  
Sbjct: 325 SLPVEIGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTSVPAEIGQLTSLIS 384

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 201
           L L  N L ++         PA +  L +      ++   T+    I   T L+    EL
Sbjct: 385 LHLGKNQLTSV---------PAEIGQLTAMTELYLNANQLTSLPAEIWQLTPLT----EL 431

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
            L G  L+++P+EI +   +T+L+LS N +  +P E+    S +   LS N++   P A 
Sbjct: 432 YLYGNQLTSVPAEIGQLRSLTELNLSSNQLTNVPAEIGQLRSRREFGLSGNQLTSVP-AE 490

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 320
           +  L+SL    L  N L  VP++    +  L+ L L  N + S+P       L  L+ LY
Sbjct: 491 IGQLTSLEEFGLSGNQLTSVPAE-IGRLTSLERLWLEDNKLTSVPAE--IGRLRALEWLY 547

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L   QL   P ++ +L  L  LDL  N L S+P     LTSL  L+L +N ++++P E+G
Sbjct: 548 LHGNQLTSVPAEVGQLTSLEKLDLQHNQLTSVPVEVGQLTSLMSLNLGNNRLTSVPAEIG 607

Query: 381 LLEPSLQALRLDGNPLRSI 399
            L  SL  L L  N L S+
Sbjct: 608 QL-TSLWELWLHDNELTSV 625



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 130/398 (32%), Positives = 203/398 (51%), Gaps = 22/398 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN+LT +    I   T L  L  + N L  +P  IG L+ LI L L +N++ S+P+
Sbjct: 339 LQLGGNQLTSVPAE-IRQLTSLKCLDLNNNQLTSVPAEIGQLTSLISLHLGKNQLTSVPA 397

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    ++ E Y+  N L++LPAE+ +L+ L  L L+ NQL     E  QLR L+ L+LS
Sbjct: 398 EIGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYGNQLTSVPAEIGQLRSLTELNLS 457

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N L+ +P EIG++ + R+  L+GN L ++         PA +  L S        E   
Sbjct: 458 SNQLTNVPAEIGQLRSRREFGLSGNQLTSV---------PAEIGQLTSL------EEFGL 502

Query: 183 TKEDLITMATRLS-VTSKE-LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
           +   L ++   +  +TS E L LE   L+++P+EI     +  L L  N +  +P E+  
Sbjct: 503 SGNQLTSVPAEIGRLTSLERLWLEDNKLTSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQ 562

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             SL+ L L  N++   P  +   L+SL  L L NN L  VP++  +   + ++      
Sbjct: 563 LTSLEKLDLQHNQLTSVPVEV-GQLTSLMSLNLGNNRLTSVPAEIGQLTSLWELWLHDNE 621

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
           + S+P       L  L+EL L   QL   P +I +L  L+ L+L  N L S+P     LT
Sbjct: 622 LTSVPAE--IWQLTSLRELSLAVNQLTSVPAEIGQLTSLKTLELGGNQLTSVPAEIGQLT 679

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           SL  LDL DN ++++P ++     SL++L L  N L S
Sbjct: 680 SLETLDLDDNKLTSVPADILQQLTSLESLELGDNHLTS 717



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 147/444 (33%), Positives = 210/444 (47%), Gaps = 42/444 (9%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRIL 59
            +  L++ GN+LT +    I   T L  L    N L  +P  I   L+ L  L+L  N + 
Sbjct: 658  LKTLELGGNQLTSVPAE-IGQLTSLETLDLDDNKLTSVPADILQQLTSLESLELGDNHLT 716

Query: 60   SIPSSISGCCSLAEFYM-GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 117
            S P  I    SL E  + GN   +++PAE+G+L+ L TLDL  NQL     E  QL  L 
Sbjct: 717  SWPEEIGQLTSLKELTLRGNKLTTSVPAEIGQLTSLKTLDLRCNQLTSVPAEIGQLTSLR 776

Query: 118  VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL------------RSSLVNGPT---- 161
             L L++N L+ +P E+G++T+L  L L GN L  +            R  L +G T    
Sbjct: 777  WLWLNDNRLTSVPAELGQLTSLEGLWLKGNQLTIVPAEIRELKAAGCRVDLDDGVTMDEG 836

Query: 162  ---------PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
                      A+   L+   PE+E  E        +TM     V   EL + G+   A+P
Sbjct: 837  DDARALRTWRAMCPDLQGMWPEDEQPEDWYR----VTMENDGRVVQLELEVFGLT-GAVP 891

Query: 213  SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
            +E+     +  L L  N +  LP E+    SL+ L L+ N++   P A +  L+SL  L 
Sbjct: 892  AELGRLSALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVP-AEIGQLTSLRELY 950

Query: 273  LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 331
            L  N L  VP++    +  L  L+L  N + SLP       L  L++L L   QL   P 
Sbjct: 951  LYENQLTSVPAE-IGQLTALARLELRDNQLTSLPAE--IGQLAALEKLSLDSNQLTSVPA 1007

Query: 332  DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
            +I +L  L+ L LS N L S+P     LTSL EL L  N ++++P E+G L  SLQ L L
Sbjct: 1008 EIGQLTSLKTLGLSDNMLTSVPADIGQLTSLKELRLGGNQLTSVPEEIGQL-TSLQGLYL 1066

Query: 392  DGNPLRSIRRTILDRGTKAVLKYL 415
              N L S+   I  R  +AV  Y+
Sbjct: 1067 WQNRLTSVPAAI--RELRAVGCYV 1088



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 121/373 (32%), Positives = 186/373 (49%), Gaps = 28/373 (7%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
            L   +P  +G L+ L  L +  N + S+P+ I    SL E ++  N L+++P E+G+L+
Sbjct: 252 GLTGAVPAEVGRLTALRELVVGGNALTSVPAEIGLLTSLRELWLSGNRLTSVPEEIGQLT 311

Query: 93  KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
            +  L L++NQL    VE  QLR L +L L  N L+ +P EI ++T+L+ L L  N L +
Sbjct: 312 AMTELYLNANQLTSLPVEIGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTS 371

Query: 152 LRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 207
           +         PA +  L S     L +N+ +        L  M         EL L    
Sbjct: 372 V---------PAEIGQLTSLISLHLGKNQLTSVPAEIGQLTAMT--------ELYLNANQ 414

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+++P+EIW+   +T+L L  N +  +P E+    SL  L LS N++ + P A +  L S
Sbjct: 415 LTSLPAEIWQLTPLTELYLYGNQLTSVPAEIGQLRSLTELNLSSNQLTNVP-AEIGQLRS 473

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
                L  N L  VP++    +  L+   LS N + S+P       L  L+ L+L   +L
Sbjct: 474 RREFGLSGNQLTSVPAE-IGQLTSLEEFGLSGNQLTSVPAE--IGRLTSLERLWLEDNKL 530

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
              P +I RL+ L  L L  N L S+P     LTSL +LDL  N ++++P E+G L  SL
Sbjct: 531 TSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLTSVPVEVGQL-TSL 589

Query: 387 QALRLDGNPLRSI 399
            +L L  N L S+
Sbjct: 590 MSLNLGNNRLTSV 602



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 138/446 (30%), Positives = 202/446 (45%), Gaps = 53/446 (11%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
            + KLD++ N+LT +    +   T L  L    N L  +P  IG L+ L  L LH N + S
Sbjct: 566  LEKLDLQHNQLTSVPVE-VGQLTSLMSLNLGNNRLTSVPAEIGQLTSLWELWLHDNELTS 624

Query: 61   IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------ 114
            +P+ I    SL E  +  N L+++PAE+G+L+ L TL+L  NQL     E  QL      
Sbjct: 625  VPAEIWQLTSLRELSLAVNQLTSVPAEIGQLTSLKTLELGGNQLTSVPAEIGQLTSLETL 684

Query: 115  -------------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
                                L  L+L +N L+  P EIG++T+L++L L GN L T   +
Sbjct: 685  DLDDNKLTSVPADILQQLTSLESLELGDNHLTSWPEEIGQLTSLKELTLRGNKLTTSVPA 744

Query: 156  LVNGPTPALLKYLRSRLPENEDSEAS----TTKEDLITMATRLSVTSKEL----SLEGM- 206
             +   T   LK L  R  +     A     T+   L     RL+    EL    SLEG+ 
Sbjct: 745  EIGQLTS--LKTLDLRCNQLTSVPAEIGQLTSLRWLWLNDNRLTSVPAELGQLTSLEGLW 802

Query: 207  ----NLSAIPSEIWE---AGEITKLDLS-----RNSIQELPPELSSCASLQTLILSRNKI 254
                 L+ +P+EI E   AG    LD        +  + L    + C  LQ +     + 
Sbjct: 803  LKGNQLTIVPAEIRELKAAGCRVDLDDGVTMDEGDDARALRTWRAMCPDLQGMWPEDEQP 862

Query: 255  KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 313
            +DW    + +   +  L+L+   L          +  L+ L L  N + SLP       L
Sbjct: 863  EDWYRVTMENDGRVVQLELEVFGLTGAVPAELGRLSALRWLSLHGNQVTSLPAE--IGQL 920

Query: 314  PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
              L+ LYL   QL   P +I +L  LR L L +N L S+P     LT+L  L+L DN ++
Sbjct: 921  TSLEVLYLTENQLTSVPAEIGQLTSLRELYLYENQLTSVPAEIGQLTALARLELRDNQLT 980

Query: 374  ALPPELGLLEPSLQALRLDGNPLRSI 399
            +LP E+G L  +L+ L LD N L S+
Sbjct: 981  SLPAEIGQL-AALEKLSLDSNQLTSV 1005


>gi|432116060|gb|ELK37190.1| Leucine-rich repeat-containing protein 40 [Myotis davidii]
          Length = 561

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 222/454 (48%), Gaps = 86/454 (18%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG----------------- 67
           L +L  S N L  +P +  SLS L+RL+L  N++ ++P+ ISG                 
Sbjct: 135 LEDLDISNNCLTTVPASFSSLSSLVRLNLSSNQLKNLPAEISGMKRLKHLDCNSNLLESI 194

Query: 68  ----------------------------CCSLAEFYMGNNALSALPAE-LGKLSKLGTLD 98
                                       C  L E ++G N +  L AE L  L+ +  LD
Sbjct: 195 PSELAGMESLELLYLRRNKLRFLPEFPSCKLLKELHLGENQIEMLGAEHLKHLNSILVLD 254

Query: 99  LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
           L  N+LK    E   L+ L  LDLSNN +S LP  +GK+  L+ L L GNP+RT+R  ++
Sbjct: 255 LRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGKL-HLKFLALEGNPMRTIRREII 313

Query: 158 NGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMNLSAI 211
           N  T  +LKYLRS++ ++   ++ +  E  +T+   +R++V    T K L       + I
Sbjct: 314 NKGTQEVLKYLRSKIKDDGPRQSDSVIETAMTLPSESRVNVHAIITLKILDYSDKQTTLI 373

Query: 212 PSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLSS 267
           P E+++A +   +T ++ S+N + E+P  +     + + + L  NK+       L  L  
Sbjct: 374 PDEVFDAVKSNIVTSINFSKNQLCEIPKRIIELKEMVSDVNLGFNKLS-LISLELCMLQK 432

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           LS L L NN L  +P +  + +  LQ ++LS+N         F  LP +  LY       
Sbjct: 433 LSFLDLRNNFLNSLPEE-MESLIRLQTINLSFN--------RFKILPEV--LY------- 474

Query: 328 EAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
                  R+  L  + +S N + S+ PE  K + +L  LDL +N++  +PPELG    +L
Sbjct: 475 -------RISTLETILISNNQVGSVNPEKLKIMENLVTLDLQNNDLLQIPPELGNC-VNL 526

Query: 387 QALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           + L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 527 RTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 560



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 163/309 (52%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  I ++  L+KL ++ N L+ L   + N      L+ L       
Sbjct: 66  LTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITN------LRNL------- 112

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                  K L L+   L++IP    +   +  LD+S N +  +P
Sbjct: 113 -----------------------KGLYLQHNELTSIPEGFEQLFNLEDLDISNNCLTTVP 149

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              SS +SL  L LS N++K+ P A ++ +  L  L  ++N L  +PS+    +  L++L
Sbjct: 150 ASFSSLSSLVRLNLSSNQLKNLP-AEISGMKRLKHLDCNSNLLESIPSE-LAGMESLELL 207

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL+L   Q+     + L+ L  + +LDL  N L+S+P
Sbjct: 208 YLRRNKLRFLPE---FPSCKLLKELHLGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVP 264

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNP+R+IRR I+++GT+ VLK
Sbjct: 265 DEITLLQSLERLDLSNNDISSLPYSLGKLH--LKFLALEGNPMRTIRREIINKGTQEVLK 322

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 323 YLRSKIKDD 331



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 145/318 (45%), Gaps = 50/318 (15%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +L +  + +N
Sbjct: 38  WEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN 97

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 138
            L  LP E+  L  L  L L  N+L        QL  L  LD+SNN L+ +P     +++
Sbjct: 98  KLKILPEEITNLRNLKGLYLQHNELTSIPEGFEQLFNLEDLDISNNCLTTVPASFSSLSS 157

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L +L L+ N L+ L         PA               E S  K        RL    
Sbjct: 158 LVRLNLSSNQLKNL---------PA---------------EISGMK--------RL---- 181

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           K L      L +IPSE+     +  L L RN ++ L PE  SC  L+ L L  N+I+   
Sbjct: 182 KHLDCNSNLLESIPSELAGMESLELLYLRRNKLRFL-PEFPSCKLLKELHLGENQIEMLG 240

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH-LQ 317
              L  L+S+  L L +N L+ VP D    +  L+ LDLS N          SSLP+ L 
Sbjct: 241 AEHLKHLNSILVLDLRDNKLKSVP-DEITLLQSLERLDLSNN--------DISSLPYSLG 291

Query: 318 ELYLRRMQLREAPTDILR 335
           +L+L+ + L   P   +R
Sbjct: 292 KLHLKFLALEGNPMRTIR 309



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 2/175 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ ++   N+L  +   +I    M++++    N L+ +   +  L +L  LDL  N + S
Sbjct: 386 VTSINFSKNQLCEIPKRIIELKEMVSDVNLGFNKLSLISLELCMLQKLSFLDLRNNFLNS 445

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSV 118
           +P  +     L    +  N    LP  L ++S L T+ + +NQ+     E  ++   L  
Sbjct: 446 LPEEMESLIRLQTINLSFNRFKILPEVLYRISTLETILISNNQVGSVNPEKLKIMENLVT 505

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 506 LDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 560


>gi|344279012|ref|XP_003411285.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Loxodonta africana]
          Length = 602

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 234/500 (46%), Gaps = 108/500 (21%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL+V  NKL +L    I +   L  L    N L  +PE    LS L  LDL  NR+ +
Sbjct: 130 LQKLNVSHNKLKILPEE-ITNLRNLKGLYLQHNELTCIPEGFEQLSSLEDLDLSSNRLTT 188

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN------------------ 102
           +P S S   SL    + +N L +LPAE+ ++ KL  LD +SN                  
Sbjct: 189 VPVSFSALSSLVRLNLSSNQLKSLPAEISRMKKLKHLDCNSNLLETIPSELAGMESLELL 248

Query: 103 -----------------QLKEYCVEACQLRL------------SVLDLSNNSLSGLPPEI 133
                             LKE  V   Q+ +             VL+L +N L  +P EI
Sbjct: 249 YLRRNKLHSLPQFPSCRLLKELHVGENQIEMLGAEHLKHLNSILVLELRDNKLKSVPDEI 308

Query: 134 GKMTTLRK----------------------LLLTGNPLRTLRSSLVNGPTPALLKYLRSR 171
             + +L +                      L L GNPLRT+R  ++N  T  +LKYLRS+
Sbjct: 309 TLLQSLERLDLSNNDISSLPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSK 368

Query: 172 LPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMNLSAIPSEIWEAGE---IT 222
           + ++  +++ +  E  +T+   +R++V    T K L       ++IP E+++A +   +T
Sbjct: 369 IRDDRPTQSDSVTETAMTLPSESRVNVHAITTLKTLDYSDKQKTSIPDEVFDAVKSHIVT 428

Query: 223 KLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
            ++ S+N + E+P  +     + + + LS NK+  +    L  L  L+ L L NN L  +
Sbjct: 429 SVNFSKNELCEIPKRIVELKEMVSDVNLSFNKL-SFVSLELCMLQKLTFLDLRNNFLNSL 487

Query: 282 PSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           P +  + +  LQ+++LS+N         F  LP +  LY              R+  L  
Sbjct: 488 PEE-MESLIRLQMINLSFN--------RFKILPEV--LY--------------RIPTLET 522

Query: 342 LDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIR 400
           + +S N + S+ P+  K + +LT LDL +N++  +PPELG    +L+ L LDGNP R  R
Sbjct: 523 VLISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNC-VNLRTLLLDGNPFRVPR 581

Query: 401 RTILDRGTKAVLKYLKDKIP 420
             IL +GT A+L+YL+D+IP
Sbjct: 582 AAILMKGTAAILEYLRDRIP 601



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 103/309 (33%), Positives = 162/309 (52%), Gaps = 45/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  I ++  L+KL ++ N L+ L   + N      L+ L       
Sbjct: 107 LTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITN------LRNL------- 153

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                  K L L+   L+ IP    +   +  LDLS N +  +P
Sbjct: 154 -----------------------KGLYLQHNELTCIPEGFEQLSSLEDLDLSSNRLTTVP 190

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              S+ +SL  L LS N++K  P A ++ +  L  L  ++N L  +PS+    +  L++L
Sbjct: 191 VSFSALSSLVRLNLSSNQLKSLP-AEISRMKKLKHLDCNSNLLETIPSE-LAGMESLELL 248

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N + SLP+   F S   L+EL++   Q+     + L+ L  + +L+L  N L+S+P
Sbjct: 249 YLRRNKLHSLPQ---FPSCRLLKELHVGENQIEMLGAEHLKHLNSILVLELRDNKLKSVP 305

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+++GT+ VLK
Sbjct: 306 DEITLLQSLERLDLSNNDISSLPYSLGNLH--LKFLALEGNPLRTIRREIINKGTQEVLK 363

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 364 YLRSKIRDD 372



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 172/383 (44%), Gaps = 68/383 (17%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +L +  + +N
Sbjct: 79  WEQTDLTKLIISNNKLQSITDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN 138

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV---LDLSNNSLSGLPPEIGKM 136
            L  LP E+  L  L  L L  N+L   C+     +LS    LDLS+N L+ +P     +
Sbjct: 139 KLKILPEEITNLRNLKGLYLQHNELT--CIPEGFEQLSSLEDLDLSSNRLTTVPVSFSAL 196

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           ++L +L L+ N L++L         PA               E S  K+           
Sbjct: 197 SSLVRLNLSSNQLKSL---------PA---------------EISRMKK----------- 221

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K L      L  IPSE+     +  L L RN +  L P+  SC  L+ L +  N+I+ 
Sbjct: 222 -LKHLDCNSNLLETIPSELAGMESLELLYLRRNKLHSL-PQFPSCRLLKELHVGENQIEM 279

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
                L  L+S+  L+L +N L+ VP D    +  L+ LDLS N I+SLP +    +L H
Sbjct: 280 LGAEHLKHLNSILVLELRDNKLKSVP-DEITLLQSLERLDLSNNDISSLPYS--LGNL-H 335

Query: 316 LQELYL--------RRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-----------GF 356
           L+ L L        RR  + +   ++L+  + +I D       S+ E             
Sbjct: 336 LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIRDDRPTQSDSVTETAMTLPSESRVNV 395

Query: 357 KNLTSLTELDLSDNNISALPPEL 379
             +T+L  LD SD   +++P E+
Sbjct: 396 HAITTLKTLDYSDKQKTSIPDEV 418



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 29/203 (14%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S +L+L G NLS +P  +W       +D+   + Q L               S    + W
Sbjct: 38  SGQLNLSGRNLSEVPQCVWRIN----VDIPEEANQNL---------------SFGATERW 78

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
            +      + L+ L + NN L+ + +D  + +P L +LD+  N + SLP       L +L
Sbjct: 79  WEQ-----TDLTKLIISNNKLQSI-TDDLRLLPALTVLDIHDNQLTSLPS--AIRELENL 130

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           Q+L +   +L+  P +I  L+ L+ L L  N L  IPEGF+ L+SL +LDLS N ++ +P
Sbjct: 131 QKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQLSSLEDLDLSSNRLTTVP 190

Query: 377 PELGLLEPSLQALRLDGNPLRSI 399
                L  SL  L L  N L+S+
Sbjct: 191 VSFSALS-SLVRLNLSSNQLKSL 212


>gi|31541911|ref|NP_077156.2| leucine-rich repeat-containing protein 40 [Mus musculus]
 gi|26330340|dbj|BAC28900.1| unnamed protein product [Mus musculus]
 gi|74194456|dbj|BAE37277.1| unnamed protein product [Mus musculus]
 gi|148679901|gb|EDL11848.1| leucine rich repeat containing 40, isoform CRA_a [Mus musculus]
          Length = 602

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 136/416 (32%), Positives = 208/416 (50%), Gaps = 44/416 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+    L  L    NLL  +P  +GS+  L  L L +N++  +P     C  L E ++  
Sbjct: 216 ISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELHLAE 274

Query: 79  NALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           N +  L AE L  L  +  LDL  N+L+    E   L+ L  LDLSNN +S LP  +G +
Sbjct: 275 NQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL 334

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L+ L L GNPLRT+R  ++   T  +LKYLRS++ ++  ++  +  E  +T+ +   V
Sbjct: 335 H-LKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARV 393

Query: 197 ------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTL 247
                 T K L       + IP ++++A +   IT ++ S+N + E+P  +     +   
Sbjct: 394 NIHAIATLKLLDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLD 453

Query: 248 I-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           I LS NK        L+ +S   CL                 +  L  LDL  N ++SLP
Sbjct: 454 INLSFNK--------LSFISHELCL-----------------LQKLTFLDLRNNFLSSLP 488

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTE 364
           E    SSL  LQ + L   + +  P  + R+  L  + +S N + S+ P+  K + +L  
Sbjct: 489 EE--MSSLTKLQTINLSFNRFKVFPEVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNT 546

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           LDL +N++  +PPELG     L+ L LDGNP R  R  IL +GT AVL+YL+D+IP
Sbjct: 547 LDLQNNDLLQIPPELGNC-VQLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 601



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 138/268 (51%), Gaps = 51/268 (19%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L +    L+++PS I E   + KL++S N ++ LP E++S  +L+TL L  N++   P+ 
Sbjct: 110 LDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKILPEEITSLKNLRTLHLQHNELTCIPEG 169

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSD---------------GFKDIPM-------LQILDLS 298
               LS L  L L +N L  VP+D                 K++P        L+ LD  
Sbjct: 170 -FEHLSCLEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLKNLPAEISRMKRLKHLDCD 228

Query: 299 YNI-ASLPENPPFSSLPHLQELYLRRMQLREAPT-----------------------DIL 334
            N+  ++P  P   S+  L+ LYLRR +LR  P                         + 
Sbjct: 229 ANLLETVP--PDVGSMESLELLYLRRNKLRVLPEFPSCRQLKELHLAENQIEKLGAEHLQ 286

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            LQ + +LDL  N L+S+PE    L SL  LDLS+N+IS+LP  LG L   L+ L L+GN
Sbjct: 287 HLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNLH--LKFLALEGN 344

Query: 395 PLRSIRRTILDRGTKAVLKYLKDKIPEN 422
           PLR+IRR I+ +GT+ VLKYL+ KI ++
Sbjct: 345 PLRTIRREIIAKGTQEVLKYLRSKIKDD 372



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 28/198 (14%)

Query: 4   LDVEGNKLTVLSNNLI--ASWTMLTELIASKNLLNGMPETIGSLSRLI-RLDLHQNRILS 60
           LD    + T++ ++L      T++T +  SKN L  +P+ I  L  ++  ++L  N++  
Sbjct: 404 LDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLDINLSFNKLSF 463

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--------CVEAC 112
           I   +     L    + NN LS+LP E+  L+KL T++L  N+ K +         +EA 
Sbjct: 464 ISHELCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVFPEVLYRISTLEAV 523

Query: 113 QL-----------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
            +                  L+ LDL NN L  +PPE+G    LR LLL GNP R  R++
Sbjct: 524 LISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELGNCVQLRTLLLDGNPFRVPRAA 583

Query: 156 LVNGPTPALLKYLRSRLP 173
           ++   T A+L+YLR R+P
Sbjct: 584 ILMKGTAAVLEYLRDRIP 601



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 28/185 (15%)

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
           +S +L+L G NL  +P  +W       +D+   + Q L               S +  + 
Sbjct: 37  SSGQLNLAGRNLGEVPQCVWRIN----VDIPEEANQNL---------------SFSSTER 77

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
           W D      + L+ L + +N L+ + SD  + +P L +LD+  N + SLP       L +
Sbjct: 78  WWDQ-----TDLTKLIISSNKLQSL-SDDLRLLPALTVLDIHDNQLTSLPS--AIRELDN 129

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           LQ+L +   +L+  P +I  L+ LR L L  N L  IPEGF++L+ L +LDLS N ++ +
Sbjct: 130 LQKLNVSHNKLKILPEEITSLKNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATV 189

Query: 376 PPELG 380
           P +  
Sbjct: 190 PADFA 194


>gi|427735457|ref|YP_007055001.1| hypothetical protein Riv7116_1913 [Rivularia sp. PCC 7116]
 gi|427370498|gb|AFY54454.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 955

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 136/419 (32%), Positives = 202/419 (48%), Gaps = 73/419 (17%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ GN+LTVL    I   T L  LI  K   +     +G++          N++  +P 
Sbjct: 21  LDLSGNELTVLPPE-IGKLTQLKRLILGKYRYDDKGRIVGTIG---------NKLSKLPR 70

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I     L EF++  N LS+LPAE+G+L+KL +L+L                      S+
Sbjct: 71  EIGLLAQLEEFHIVRNKLSSLPAEIGQLAKLQSLNL----------------------SH 108

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N LS LP EIG++T L+ L L+ N L +L         PA +  L               
Sbjct: 109 NRLSSLPAEIGQLTKLQSLDLSFNQLSSL---------PAEIGQL--------------- 144

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
                          + L+L    LS++P+EI +  ++  LDL  N +  LP E+     
Sbjct: 145 ------------AKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTK 192

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 302
           LQTL L  N++   P A +  L+ L  L L NN L  +P++    +  LQ L LS+N ++
Sbjct: 193 LQTLDLYNNQLSSLP-AEIGQLTKLQTLDLYNNQLSSLPAE-IGQLTNLQFLHLSHNKLS 250

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
           SLP       L +LQ L+L   +L   P +I++L  L+ LDLS N L S+P     LT L
Sbjct: 251 SLP--AEIVQLTNLQFLHLSHNKLSSLPAEIVQLTNLQSLDLSHNKLSSLPAEIGQLTKL 308

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
             L+L  N +++LP E+G L   L+ L+LD N L S    IL +GTKA+L + K ++ +
Sbjct: 309 QFLNLKGNQLNSLPTEIGHLYSCLRELKLDSNLLESPPPEILSKGTKAILNFYKQQLEQ 367



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/294 (36%), Positives = 146/294 (49%), Gaps = 19/294 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +  +  NKL+ L    I     L  L  S N L+ +P  IG L++L  LDL  N++ S
Sbjct: 78  LEEFHIVRNKLSSLPAE-IGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQSLDLSFNQLSS 136

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I     L    + +N LS+LPAE+G+L+KL TLDL++NQL     E  QL +L  L
Sbjct: 137 LPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTL 196

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL NN LS LP EIG++T L+ L L  N L +L + +        L    ++L       
Sbjct: 197 DLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTNLQFLHLSHNKL------- 249

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +S   E  I   T L      L L    LS++P+EI +   +  LDLS N +  LP E+ 
Sbjct: 250 SSLPAE--IVQLTNLQF----LHLSHNKLSSLPAEIVQLTNLQSLDLSHNKLSSLPAEIG 303

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP----SDGFKDI 289
               LQ L L  N++   P  I    S L  LKLD+N L   P    S G K I
Sbjct: 304 QLTKLQFLNLKGNQLNSLPTEIGHLYSCLRELKLDSNLLESPPPEILSKGTKAI 357



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 138/266 (51%), Gaps = 16/266 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L+ L    I     L  L  S N L+ +P  IG L++L  LDL+ N++ S
Sbjct: 124 LQSLDLSFNQLSSLPAE-IGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSS 182

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I     L    + NN LS+LPAE+G+L+KL TLDL++NQL     E  QL  L  L
Sbjct: 183 LPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTNLQFL 242

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LS+N LS LP EI ++T L+ L L+ N L +L + +V       L    ++L       
Sbjct: 243 HLSHNKLSSLPAEIVQLTNLQFLHLSHNKLSSLPAEIVQLTNLQSLDLSHNKL------- 295

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPEL 238
           +S   E  I   T+L      L+L+G  L+++P+EI      + +L L  N ++  PPE+
Sbjct: 296 SSLPAE--IGQLTKLQF----LNLKGNQLNSLPTEIGHLYSCLRELKLDSNLLESPPPEI 349

Query: 239 SSCASLQTLILSRNKIKDWPDAILTS 264
            S  +   L   + +++   D +  +
Sbjct: 350 LSKGTKAILNFYKQQLEQTIDRLYEA 375


>gi|255080388|ref|XP_002503774.1| predicted protein [Micromonas sp. RCC299]
 gi|226519041|gb|ACO65032.1| predicted protein [Micromonas sp. RCC299]
          Length = 683

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 141/422 (33%), Positives = 209/422 (49%), Gaps = 63/422 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L++ GN+LT +   ++   T L  L    N L  +P  IG L+ L RL L+ N++ S
Sbjct: 255 LTELNLNGNQLTSVPAEVV-QLTSLDTLRLGGNQLTSVPADIGQLTSLRRLFLYGNQLTS 313

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I+   SL E    N+ L+++PAE+G+L+ L   DL  N+L     E  QL  L  L
Sbjct: 314 VPAEIAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALREL 373

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N L+ LP EIG++ +L+KLLL  N L +L         PA +  L S         
Sbjct: 374 RLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSL---------PADIGQLTSLW------- 417

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                               EL L+G  L+++P+EI +   + KLDLS N +  +P E+ 
Sbjct: 418 --------------------ELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIG 457

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              SL  L L+ N++   P A +  L+SL  L   N+ L  VP++    +  L+  DL  
Sbjct: 458 QLTSLTELYLNGNQLTSVP-AEIAQLTSLRELGFYNSQLTSVPAE-IGQLTSLEKWDLGK 515

Query: 300 N-IASLP--------------ENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQ 337
           N +AS+P              +    +SLP        L++L L   QL   P DI +L 
Sbjct: 516 NELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQLT 575

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
            L  L L  N L S+P     LTSL +LDLSDN ++++P E+G L  SL  L L+GN L 
Sbjct: 576 SLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQL-TSLTELYLNGNQLT 634

Query: 398 SI 399
           S+
Sbjct: 635 SV 636



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 139/418 (33%), Positives = 205/418 (49%), Gaps = 52/418 (12%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           KL++E   LT      I   T + +L  +KN L  +P  IG L+ L  L L  NR+ S+P
Sbjct: 187 KLELEDFDLTGAVPAEIGQLTSMVKLSLTKNQLTSLPAEIGQLTSLRELALDNNRLTSVP 246

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 122
           + I    SL E  +  N L+++PAE+ +L+ L TL L  NQ                   
Sbjct: 247 AEIGQLTSLTELNLNGNQLTSVPAEVVQLTSLDTLRLGGNQ------------------- 287

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL---PENEDSE 179
              L+ +P +IG++T+LR+L L GN L ++ + +    +   L +  S+L   P      
Sbjct: 288 ---LTSVPADIGQLTSLRRLFLYGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQL 344

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
            S  K DL                 G N L+++P+EI +   + +L L  N +  LP E+
Sbjct: 345 TSLEKWDL-----------------GKNELASVPAEIGQLTALRELRLDGNRLTSLPAEI 387

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
              ASL+ L+L  N++   P A +  L+SL  L+LD N L  VP++    +  L+ LDLS
Sbjct: 388 GQLASLKKLLLGCNQLTSLP-ADIGQLTSLWELRLDGNRLTSVPAE-IGQLTSLEKLDLS 445

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + S+P       L  L ELYL   QL   P +I +L  LR L    + L S+P    
Sbjct: 446 DNQLTSVPTE--IGQLTSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIG 503

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
            LTSL + DL  N ++++P E+G L  +L+ LRLDGN L S+   I   G  A LK L
Sbjct: 504 QLTSLEKWDLGKNELASVPAEIGQL-TALRELRLDGNRLTSLPAEI---GQLASLKKL 557



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 121/347 (34%), Positives = 177/347 (51%), Gaps = 27/347 (7%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   T L +    KN L  +P  IG L+ L  L L  NR+ S+P+ I    SL +  +G 
Sbjct: 341 IGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGC 400

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L++LPA++G+L+ L  L L  N+L     E  QL  L  LDLS+N L+ +P EIG++T
Sbjct: 401 NQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLT 460

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL---PENEDSEASTTKEDLITMATRL 194
           +L +L L GN L ++ + +    +   L +  S+L   P       S  K DL       
Sbjct: 461 SLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDL------- 513

Query: 195 SVTSKELSLEGMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
                     G N L+++P+EI +   + +L L  N +  LP E+   ASL+ L+L  N+
Sbjct: 514 ----------GKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQ 563

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 312
           +   P A +  L+SL  L+LD N L  VP++    +  L+ LDLS N + S+P       
Sbjct: 564 LTSLP-ADIGQLTSLWELRLDGNRLTSVPAE-IGQLTSLEKLDLSDNQLTSVPTE--IGQ 619

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           L  L ELYL   QL   PT+I +L  L  L LS N L+S+P   + L
Sbjct: 620 LTSLTELYLNGNQLTSVPTEIAQLSLLEQLWLSGNRLKSVPAAIREL 666



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 11/171 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + K D+  N+L  +    I   T L EL    N L  +P  IG L+ L +L L  N++ S
Sbjct: 508 LEKWDLGKNELASVPAE-IGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTS 566

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I    SL E  +  N L+++PAE+G+L+ L  LDL  NQL     E  QL  L+ L
Sbjct: 567 LPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTEL 626

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 170
            L+ N L+ +P EI +++ L +L L+GN L+++         PA ++ LR+
Sbjct: 627 YLNGNQLTSVPTEIAQLSLLEQLWLSGNRLKSV---------PAAIRELRA 668



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 116/236 (49%), Gaps = 38/236 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L + GN+LT +    IA  T L EL    + L  +P  IG L+ L + DL +N + S
Sbjct: 462 LTELYLNGNQLTSVPAE-IAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELAS 520

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I    +L E  +  N L++LPAE+G+L+ L  L L  NQL     +  QL  L  L
Sbjct: 521 VPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQLTSLWEL 580

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N L+ +P EIG++T+L KL L+ N L ++       PT                  
Sbjct: 581 RLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSV-------PTE----------------- 616

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                   I   T L+    EL L G  L+++P+EI +   + +L LS N ++ +P
Sbjct: 617 --------IGQLTSLT----ELYLNGNQLTSVPTEIAQLSLLEQLWLSGNRLKSVP 660



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 2/98 (2%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +L ++GN+LT +    I   T L +L  S N L  +P  IG L+ L  L L+ N++ S+P
Sbjct: 579 ELRLDGNRLTSVPAE-IGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVP 637

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLG-TLDL 99
           + I+    L + ++  N L ++PA + +L   G T+DL
Sbjct: 638 TEIAQLSLLEQLWLSGNRLKSVPAAIRELRAAGCTVDL 675


>gi|26375000|dbj|BAB27802.2| unnamed protein product [Mus musculus]
          Length = 602

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 136/416 (32%), Positives = 208/416 (50%), Gaps = 44/416 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+    L  L    NLL  +P  +GS+  L  L L +N++  +P     C  L E ++  
Sbjct: 216 ISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELHLAE 274

Query: 79  NALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           N +  L AE L  L  +  LDL  N+L+    E   L+ L  LDLSNN +S LP  +G +
Sbjct: 275 NQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL 334

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L+ L L GNPLRT+R  ++   T  +LKYLRS++ ++  ++  +  E  +T+ +   V
Sbjct: 335 H-LKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARV 393

Query: 197 ------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTL 247
                 T K L       + IP ++++A +   IT ++ S+N + E+P  +     +   
Sbjct: 394 NIHAIATLKLLDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLD 453

Query: 248 I-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           I LS NK        L+ +S   CL                 +  L  LDL  N ++SLP
Sbjct: 454 INLSFNK--------LSFISHELCL-----------------LQKLTFLDLRNNFLSSLP 488

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTE 364
           E    SSL  LQ + L   + +  P  + R+  L  + +S N + S+ P+  K + +L  
Sbjct: 489 EE--MSSLTKLQTINLSFNRFKVFPEVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNT 546

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           LDL +N++  +PPELG     L+ L LDGNP R  R  IL +GT AVL+YL+D+IP
Sbjct: 547 LDLQNNDLLQIPPELGNC-VQLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 601



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 138/268 (51%), Gaps = 51/268 (19%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L +    L+++PS I E   + KL++S N ++ LP E++S  +L+TL L  N++   P+ 
Sbjct: 110 LDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKILPEEITSLKNLRTLHLQHNELTCIPEG 169

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSD---------------GFKDIPM-------LQILDLS 298
               LS L  L L +N L  VP+D                 K++P        L+ LD  
Sbjct: 170 -FEHLSCLEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLKNLPAEISRMKRLKHLDCD 228

Query: 299 YNI-ASLPENPPFSSLPHLQELYLRRMQLREAPT-----------------------DIL 334
            N+  ++P  P   S+  L+ LYLRR +LR  P                         + 
Sbjct: 229 ANLLETVP--PDVGSMESLELLYLRRNKLRVLPEFPSCRQLKELHLAENQIEKLGAEHLQ 286

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            LQ + +LDL  N L+S+PE    L SL  LDLS+N+IS+LP  LG L   L+ L L+GN
Sbjct: 287 HLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNLH--LKFLALEGN 344

Query: 395 PLRSIRRTILDRGTKAVLKYLKDKIPEN 422
           PLR+IRR I+ +GT+ VLKYL+ KI ++
Sbjct: 345 PLRTIRREIIAKGTQEVLKYLRSKIKDD 372



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 28/198 (14%)

Query: 4   LDVEGNKLTVLSNNLI--ASWTMLTELIASKNLLNGMPETIGSLSRLI-RLDLHQNRILS 60
           LD    + T++ ++L      T++T +  SKN L  +P+ I  L  ++  ++L  N++  
Sbjct: 404 LDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLDINLSFNKLSF 463

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--------CVEAC 112
           I   +     L    + NN LS+LP E+  L+KL T++L  N+ K +         +EA 
Sbjct: 464 ISHELCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVFPEVLYRISTLEAV 523

Query: 113 QL-----------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
            +                  L+ LDL NN L  +PPE+G    LR LLL GNP R  R++
Sbjct: 524 LISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELGNCVQLRTLLLDGNPFRVPRAA 583

Query: 156 LVNGPTPALLKYLRSRLP 173
           ++   T A+L+YLR R+P
Sbjct: 584 ILMKGTAAVLEYLRDRIP 601



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 28/185 (15%)

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
           +S +L+L G NL  +P  +W       +D+   + Q L               S +  + 
Sbjct: 37  SSGQLNLAGRNLGEVPQCVWRIN----VDIPEEANQNL---------------SFSSTER 77

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
           W D      + L+ L + +N L+ + SD  + +P L +LD+  N + SLP       L +
Sbjct: 78  WWDQ-----TDLTKLIISSNKLQSL-SDDLRLLPALTVLDIHDNQLTSLPS--AIRELDN 129

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           LQ+L +   +L+  P +I  L+ LR L L  N L  IPEGF++L+ L +LDLS N ++ +
Sbjct: 130 LQKLNVSHNKLKILPEEITSLKNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATV 189

Query: 376 PPELG 380
           P +  
Sbjct: 190 PADFA 194


>gi|41282208|ref|NP_956156.2| leucine-rich repeat-containing protein 40 [Danio rerio]
 gi|37595350|gb|AAQ94561.1| hypothetical protein FLJ20331 [Danio rerio]
          Length = 601

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 139/433 (32%), Positives = 215/433 (49%), Gaps = 42/433 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+  NKL  L    I+    L  L  S+N +  +P  +  +  L +L L  N++  
Sbjct: 197 LVKLDLSCNKLKSLPP-AISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLRY 255

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 118
           +P  +  C +L E + GNN +  L AE L  L+ L  L+L  N++K    E   L+ L  
Sbjct: 256 LPE-LPCCKTLKELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLER 314

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE---- 174
           LDL+NN +S LP  +G +  L+ L L GNPLR +R  L+   T  LLKYLRSR+ E    
Sbjct: 315 LDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSRVQEPPNG 374

Query: 175 --NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRN 229
              E+ + + T +    +      T K L       ++IP ++ +A +   +  ++ S+N
Sbjct: 375 GLKEEPKTAMTFQSQAKINIHAIKTLKTLDYSEKQDASIPDDVLDAVDGNPVANVNFSKN 434

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  +P                ++I D  D       +L+ + L  N L  +P+D F  +
Sbjct: 435 QLTAVP----------------HRIVDLKD-------TLADINLGFNKLTTIPAD-FCHL 470

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L  +DL  N + SLP       L  L+ + L   + +  P  + R+  L  + +S N 
Sbjct: 471 KQLMHIDLRNNLLISLPME--LEGLIKLRSVILSFNRFKSFPEVLYRIPSLETILISSNQ 528

Query: 349 LQSIPE-GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
           +  I     K L+ L+ LDLS+N+I  +PPELG    SL+AL LDGNP R+ R  IL +G
Sbjct: 529 VGGIDAVQMKTLSRLSTLDLSNNDIMQVPPELGNCT-SLRALMLDGNPFRNPRAAILIKG 587

Query: 408 TKAVLKYLKDKIP 420
           T AVL+YL+ +IP
Sbjct: 588 TDAVLEYLRSRIP 600



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 157/310 (50%), Gaps = 48/310 (15%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS---LVNGPTPALLKYLRSRL 172
           L VLD+ +N LS LP  IG +  L+KL+L+ N L  L S    L N     L + L  ++
Sbjct: 105 LVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTELPSGVWRLTNLRCLHLQQNLIEQI 164

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
           P            DL  +     V   +L L   +L  IP  +     + KLDLS N ++
Sbjct: 165 PR-----------DLGQL-----VNLDDLDLSNNHLIDIPESLANLQNLVKLDLSCNKLK 208

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            LPP +S   +L+ L  SRN+++  P  +L  + SL  L L +N LR +P     ++P  
Sbjct: 209 SLPPAISQMKNLRMLDCSRNQMESIP-PVLAQMESLEQLYLRHNKLRYLP-----ELPCC 262

Query: 293 QILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQS 351
           + L                     +EL+    Q+     + L+ L  L +L+L  N ++S
Sbjct: 263 KTL---------------------KELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKS 301

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAV 411
           +PE    L  L  LDL++N+IS+LP  LG L P L++L L+GNPLR+IRR +L +GT  +
Sbjct: 302 LPEEITLLQGLERLDLTNNDISSLPCGLGTL-PKLKSLSLEGNPLRAIRRDLLTKGTGEL 360

Query: 412 LKYLKDKIPE 421
           LKYL+ ++ E
Sbjct: 361 LKYLRSRVQE 370


>gi|126305957|ref|XP_001379454.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Monodelphis domestica]
          Length = 598

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 221/455 (48%), Gaps = 63/455 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT +  +  +S + L +L  + N +  +P  I  + RL  LD   N + +
Sbjct: 171 LEDLDLSNNRLTTVPASF-SSLSKLMKLNLASNQMKNLPAEITRMKRLKHLDCTSNYLET 229

Query: 61  IPSSISG----------------------CCSLAEFYMGNNALSALPA-ELGKLSKLGTL 97
           IPS ++                       C  L E ++G N +  + A  L  L  +  L
Sbjct: 230 IPSELANMESLELLYLRRNKLRFLPEFPSCMLLKELHIGENQIEEITAGHLKHLKSVHVL 289

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL  N+LK    E   L+ L  LDL+NN +  LP  +G +  L+ L L GNPLRT+R  L
Sbjct: 290 DLRDNKLKSIPDEITLLQALERLDLTNNDVRSLPHILGTLPHLKFLALEGNPLRTIRREL 349

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV------TSKELSLEGMNLSA 210
           +N  T  +LKYLRS++ ++  ++  +  E  +T+ ++  V      T K L       + 
Sbjct: 350 LNKGTQEVLKYLRSKIKDDTPNQNDSCIETAMTLPSQSRVNTHAMTTLKLLDYSDKKATL 409

Query: 211 IPSEIWEA---GEITKLDLSRNSIQELPPELSSC-ASLQTLILSRNKIKDWPDAILTSLS 266
           IP E+++A     IT ++ ++N + E+P  +    A++  + L  NK+     A L +L 
Sbjct: 410 IPDEVFDAIGSNTITSINFTKNHLNEIPQRIVELKATVCDVNLGFNKLS-CISAELCALH 468

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
            L  L + NN L  +P +  + +  LQ ++LS+N                        +L
Sbjct: 469 KLIHLDIRNNLLTSLPEE-MEALSRLQTINLSFN------------------------RL 503

Query: 327 REAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           +  P  + RL+ L  + L  N L S+ P   + +  L  LDL +N++  +PPELG    S
Sbjct: 504 QAFPCVLYRLRTLETVLLGNNQLGSVDPLRLQQMDRLATLDLQNNDLLHVPPELGNC-VS 562

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           L+ L L+GNP R+ R  IL RGT AVL+YL+ +IP
Sbjct: 563 LRTLLLEGNPFRTPRAAILARGTDAVLEYLRGRIP 597



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 103/309 (33%), Positives = 163/309 (52%), Gaps = 44/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L++LD+ +N L+ LP  IG++  L+KL ++ N L+ L         P  L  LR+     
Sbjct: 102 LTILDMHDNQLTSLPCAIGELENLQKLNVSHNKLKML---------PEELTKLRNL---- 148

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                  K L L+   L+ +P       ++  LDLS N +  +P
Sbjct: 149 -----------------------KVLFLQYNELTCVPEGFGGLDKLEDLDLSNNRLTTVP 185

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              SS + L  L L+ N++K+ P A +T +  L  L   +N L  +PS+   ++  L++L
Sbjct: 186 ASFSSLSKLMKLNLASNQMKNLP-AEITRMKRLKHLDCTSNYLETIPSE-LANMESLELL 243

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N +  LPE   F S   L+EL++   Q+ E     L+ L+ + +LDL  N L+SIP
Sbjct: 244 YLRRNKLRFLPE---FPSCMLLKELHIGENQIEEITAGHLKHLKSVHVLDLRDNKLKSIP 300

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L +L  LDL++N++ +LP  LG L P L+ L L+GNPLR+IRR +L++GT+ VLK
Sbjct: 301 DEITLLQALERLDLTNNDVRSLPHILGTL-PHLKFLALEGNPLRTIRRELLNKGTQEVLK 359

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 360 YLRSKIKDD 368



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 166/383 (43%), Gaps = 67/383 (17%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI S N L  + + +  L  L  LD+H N++ S+P +I    +L +  + +N
Sbjct: 74  WEQTDLTKLIISNNKLQSLSDDLRLLPALTILDMHDNQLTSLPCAIGELENLQKLNVSHN 133

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVE---ACQLRLSVLDLSNNSLSGLPPEIGKM 136
            L  LP EL KL  L  L L  N+L   CV        +L  LDLSNN L+ +P     +
Sbjct: 134 KLKMLPEELTKLRNLKVLFLQYNELT--CVPEGFGGLDKLEDLDLSNNRLTTVPASFSSL 191

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           + L KL L  N ++ L +                                 IT   RL  
Sbjct: 192 SKLMKLNLASNQMKNLPAE--------------------------------ITRMKRL-- 217

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K L      L  IPSE+     +  L L RN ++ L PE  SC  L+ L +  N+I++
Sbjct: 218 --KHLDCTSNYLETIPSELANMESLELLYLRRNKLRFL-PEFPSCMLLKELHIGENQIEE 274

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
                L  L S+  L L +N L+ +P D    +  L+ LDL+ N + SLP      +LPH
Sbjct: 275 ITAGHLKHLKSVHVLDLRDNKLKSIP-DEITLLQALERLDLTNNDVRSLPH--ILGTLPH 331

Query: 316 LQELYL--------RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL-------- 359
           L+ L L        RR  L +   ++L+  + +I D + N   S  E    L        
Sbjct: 332 LKFLALEGNPLRTIRRELLNKGTQEVLKYLRSKIKDDTPNQNDSCIETAMTLPSQSRVNT 391

Query: 360 ---TSLTELDLSDNNISALPPEL 379
              T+L  LD SD   + +P E+
Sbjct: 392 HAMTTLKLLDYSDKKATLIPDEV 414


>gi|81916778|sp|Q9CRC8.2|LRC40_MOUSE RecName: Full=Leucine-rich repeat-containing protein 40
 gi|26383433|dbj|BAB30951.2| unnamed protein product [Mus musculus]
          Length = 602

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 136/416 (32%), Positives = 208/416 (50%), Gaps = 44/416 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+    L  L    NLL  +P  +GS+  L  L L +N++  +P     C  L E ++  
Sbjct: 216 ISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELHLAE 274

Query: 79  NALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           N +  L AE L  L  +  LDL  N+L+    E   L+ L  LDLSNN +S LP  +G +
Sbjct: 275 NQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL 334

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L+ L L GNPLRT+R  ++   T  +LKYLRS++ ++  ++  +  E  +T+ +   V
Sbjct: 335 H-LKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARV 393

Query: 197 ------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTL 247
                 T K L       + IP ++++A +   IT ++ S+N + E+P  +     +   
Sbjct: 394 NIHAIATLKLLDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLD 453

Query: 248 I-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           I LS NK        L+ +S   CL                 +  L  LDL  N ++SLP
Sbjct: 454 INLSFNK--------LSFISHELCL-----------------LQKLTFLDLRNNFLSSLP 488

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTE 364
           E    SSL  LQ + L   + +  P  + R+  L  + +S N + S+ P+  K + +L  
Sbjct: 489 EE--MSSLTKLQTINLSFNRFKVFPEVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNT 546

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           LDL +N++  +PPELG     L+ L LDGNP R  R  IL +GT AVL+YL+D+IP
Sbjct: 547 LDLQNNDLLQIPPELGNC-VQLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 601



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 138/268 (51%), Gaps = 51/268 (19%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L +    L+++PS I E   + KL++S N ++ LP E++S  +L+TL L  N++   P+ 
Sbjct: 110 LDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKILPEEITSLKNLRTLHLQHNELTCIPEG 169

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSD---------------GFKDIPM-------LQILDLS 298
               LS L  L L +N L  VP+D                 K++P        L+ LD  
Sbjct: 170 -FEHLSCLEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLKNLPAEISRMKRLKHLDCD 228

Query: 299 YNI-ASLPENPPFSSLPHLQELYLRRMQLREAPT-----------------------DIL 334
            N+  ++P  P   S+  L+ LYLRR +LR  P                         + 
Sbjct: 229 ANLLETVP--PDVGSMESLELLYLRRNKLRVLPEFPSCRQLKELHLAENQIEKLGAEHLQ 286

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            LQ + +LDL  N L+S+PE    L SL  LDLS+N+IS+LP  LG L   L+ L L+GN
Sbjct: 287 HLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNLH--LKFLALEGN 344

Query: 395 PLRSIRRTILDRGTKAVLKYLKDKIPEN 422
           PLR+IRR I+ +GT+ VLKYL+ KI ++
Sbjct: 345 PLRTIRREIIAKGTQEVLKYLRSKIKDD 372



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 28/198 (14%)

Query: 4   LDVEGNKLTVLSNNLI--ASWTMLTELIASKNLLNGMPETIGSLSRLI-RLDLHQNRILS 60
           LD    + T++ ++L      T++T +  SKN L  +P+ I  L  ++  ++L  N++  
Sbjct: 404 LDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLDINLSFNKLSF 463

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--------CVEAC 112
           I   +     L    + NN LS+LP E+  L+KL T++L  N+ K +         +EA 
Sbjct: 464 ISHELCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVFPEVLYRISTLEAV 523

Query: 113 QL-----------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
            +                  L+ LDL NN L  +PPE+G    LR LLL GNP R  R++
Sbjct: 524 LISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELGNCVQLRTLLLDGNPFRVPRAA 583

Query: 156 LVNGPTPALLKYLRSRLP 173
           ++   T A+L+YLR R+P
Sbjct: 584 ILMKGTAAVLEYLRDRIP 601



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 28/185 (15%)

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
           +S +L+L G NL  +P  +W       +D+   + Q L               S +  + 
Sbjct: 37  SSGQLNLAGRNLGEVPQCVWRIN----VDIPEEANQNL---------------SFSSTER 77

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
           W D      + L+ L + +N L+ + SD  + +P L +LD+  N + SLP       L +
Sbjct: 78  WWDQ-----TDLTKLIISSNKLQSL-SDDLRLLPALTVLDIHDNQLTSLPS--AIRELDN 129

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           LQ+L +   +L+  P +I  L+ LR L L  N L  IPEGF++L+ L +LDLS N ++ +
Sbjct: 130 LQKLNVSHNKLKILPEEITSLKNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATV 189

Query: 376 PPELG 380
           P +  
Sbjct: 190 PADFA 194


>gi|148679902|gb|EDL11849.1| leucine rich repeat containing 40, isoform CRA_b [Mus musculus]
          Length = 479

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 136/416 (32%), Positives = 208/416 (50%), Gaps = 44/416 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+    L  L    NLL  +P  +GS+  L  L L +N++  +P     C  L E ++  
Sbjct: 93  ISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELHLAE 151

Query: 79  NALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           N +  L AE L  L  +  LDL  N+L+    E   L+ L  LDLSNN +S LP  +G +
Sbjct: 152 NQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL 211

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L+ L L GNPLRT+R  ++   T  +LKYLRS++ ++  ++  +  E  +T+ +   V
Sbjct: 212 H-LKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARV 270

Query: 197 ------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTL 247
                 T K L       + IP ++++A +   IT ++ S+N + E+P  +     +   
Sbjct: 271 NIHAIATLKLLDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLD 330

Query: 248 I-LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           I LS NK        L+ +S   CL                 +  L  LDL  N ++SLP
Sbjct: 331 INLSFNK--------LSFISHELCL-----------------LQKLTFLDLRNNFLSSLP 365

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTE 364
           E    SSL  LQ + L   + +  P  + R+  L  + +S N + S+ P+  K + +L  
Sbjct: 366 EE--MSSLTKLQTINLSFNRFKVFPEVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNT 423

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           LDL +N++  +PPELG     L+ L LDGNP R  R  IL +GT AVL+YL+D+IP
Sbjct: 424 LDLQNNDLLQIPPELGNC-VQLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 478



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/226 (39%), Positives = 130/226 (57%), Gaps = 9/226 (3%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           + L L+   L+ IP        +  LDLS N +  +P + +  +SL  L LS N++K+ P
Sbjct: 31  RTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLKNLP 90

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
            A ++ +  L  L  D N L  VP D    +  L++L L  N +  LPE   F S   L+
Sbjct: 91  -AEISRMKRLKHLDCDANLLETVPPD-VGSMESLELLYLRRNKLRVLPE---FPSCRQLK 145

Query: 318 ELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           EL+L   Q+ +   + L+ LQ + +LDL  N L+S+PE    L SL  LDLS+N+IS+LP
Sbjct: 146 ELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLP 205

Query: 377 PELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
             LG L   L+ L L+GNPLR+IRR I+ +GT+ VLKYL+ KI ++
Sbjct: 206 CSLGNLH--LKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDD 249



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 28/198 (14%)

Query: 4   LDVEGNKLTVLSNNLI--ASWTMLTELIASKNLLNGMPETIGSLSRLI-RLDLHQNRILS 60
           LD    + T++ ++L      T++T +  SKN L  +P+ I  L  ++  ++L  N++  
Sbjct: 281 LDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLDINLSFNKLSF 340

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--------CVEAC 112
           I   +     L    + NN LS+LP E+  L+KL T++L  N+ K +         +EA 
Sbjct: 341 ISHELCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVFPEVLYRISTLEAV 400

Query: 113 QL-----------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
            +                  L+ LDL NN L  +PPE+G    LR LLL GNP R  R++
Sbjct: 401 LISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELGNCVQLRTLLLDGNPFRVPRAA 460

Query: 156 LVNGPTPALLKYLRSRLP 173
           ++   T A+L+YLR R+P
Sbjct: 461 ILMKGTAAVLEYLRDRIP 478



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 38/62 (61%)

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L+L   +L+  P +I  L+ LR L L  N L  IPEGF++L+ L +LDLS N ++ +P +
Sbjct: 10  LFLIHNKLKILPEEITSLKNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATVPAD 69

Query: 379 LG 380
             
Sbjct: 70  FA 71


>gi|255072337|ref|XP_002499843.1| predicted protein [Micromonas sp. RCC299]
 gi|226515105|gb|ACO61101.1| predicted protein [Micromonas sp. RCC299]
          Length = 412

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 139/407 (34%), Positives = 198/407 (48%), Gaps = 44/407 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L+V  N LT+L    I   T L EL  + N L  +P  IG L+ L RL LH NR+ S
Sbjct: 30  LRELNVARNALTLLPAE-IGQLTSLRELCLTGNQLTSVPADIGQLTSLERLWLHGNRLTS 88

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E ++  N L+++P E+G+L+ L  L L SNQL     E  QL  L+ L
Sbjct: 89  VPAEIGQFAALIELWLWGNKLTSVPEEIGQLTSLTYLHLGSNQLTSLPAEIGQLTALTEL 148

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L+ N L+ +P EIG++T+L KL LT N L  +         PA    L S         
Sbjct: 149 NLTENQLTNVPAEIGQLTSLVKLNLTKNQLTNV---------PAEFWRLTSL-------- 191

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                               EL L+   L+++P++I +   +T L L  N +  +P E+ 
Sbjct: 192 -------------------GELYLDDNRLTSVPADIGQLTSLTWLGLYGNQLTSVPAEIG 232

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              SL+ L LS N++   P  I   L SL  L L  N L  VP +    +  +  L LSY
Sbjct: 233 QLTSLELLRLSSNQLTSVPAEI-RQLRSLERLDLSGNQLTSVPLE-IGQLTAMTELYLSY 290

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N + SLP       L  L++LYL   +L   P +I +L  L  L L+ N L S+P     
Sbjct: 291 NQLTSLP--AEIGQLTSLEKLYLGDNRLTSVPAEIGQLTSLWGLYLNDNQLTSVPAEIGQ 348

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
           LTSL    L  N +++LP E+G L  SL   RL  N L S+   IL+
Sbjct: 349 LTSLEIFQLERNQLTSLPTEVGQL-TSLVEFRLRSNQLTSVPAAILE 394



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 190/373 (50%), Gaps = 20/373 (5%)

Query: 29  IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 88
           +A   L   +P  +G L+ L  L++ +N +  +P+ I    SL E  +  N L+++PA++
Sbjct: 11  LADCGLTGAVPAEVGRLTALRELNVARNALTLLPAEIGQLTSLRELCLTGNQLTSVPADI 70

Query: 89  GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 147
           G+L+ L  L LH N+L     E  Q   L  L L  N L+ +P EIG++T+L  L L  N
Sbjct: 71  GQLTSLERLWLHGNRLTSVPAEIGQFAALIELWLWGNKLTSVPEEIGQLTSLTYLHLGSN 130

Query: 148 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 207
            L +L + +  G   AL +     L EN+ +        L ++  +L++T  +       
Sbjct: 131 QLTSLPAEI--GQLTALTEL---NLTENQLTNVPAEIGQLTSLV-KLNLTKNQ------- 177

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+ +P+E W    + +L L  N +  +P ++    SL  L L  N++   P  I   L+S
Sbjct: 178 LTNVPAEFWRLTSLGELYLDDNRLTSVPADIGQLTSLTWLGLYGNQLTSVPAEI-GQLTS 236

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L+L +N L  VP++  + +  L+ LDLS N + S+P       L  + ELYL   QL
Sbjct: 237 LELLRLSSNQLTSVPAE-IRQLRSLERLDLSGNQLTSVP--LEIGQLTAMTELYLSYNQL 293

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
              P +I +L  L  L L  N L S+P     LTSL  L L+DN ++++P E+G L  SL
Sbjct: 294 TSLPAEIGQLTSLEKLYLGDNRLTSVPAEIGQLTSLWGLYLNDNQLTSVPAEIGQL-TSL 352

Query: 387 QALRLDGNPLRSI 399
           +  +L+ N L S+
Sbjct: 353 EIFQLERNQLTSL 365


>gi|12805599|gb|AAH02279.1| Lrrc40 protein [Mus musculus]
 gi|74206533|dbj|BAE41533.1| unnamed protein product [Mus musculus]
 gi|74212662|dbj|BAE31067.1| unnamed protein product [Mus musculus]
          Length = 384

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 135/410 (32%), Positives = 206/410 (50%), Gaps = 44/410 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L  L    NLL  +P  +GS+  L  L L +N++  +P     C  L E ++  N +  L
Sbjct: 4   LKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELHLAENQIEKL 62

Query: 85  PAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 142
            AE L  L  +  LDL  N+L+    E   L+ L  LDLSNN +S LP  +G +  L+ L
Sbjct: 63  GAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNLH-LKFL 121

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV------ 196
            L GNPLRT+R  ++   T  +LKYLRS++ ++  ++  +  E  +T+ +   V      
Sbjct: 122 ALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIA 181

Query: 197 TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRN 252
           T K L       + IP ++++A +   IT ++ S+N + E+P  +     +   I LS N
Sbjct: 182 TLKLLDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLDINLSFN 241

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
           K        L+ +S   CL                 +  L  LDL  N ++SLPE    S
Sbjct: 242 K--------LSFISHELCL-----------------LQKLTFLDLRNNFLSSLPEE--MS 274

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDN 370
           SL  LQ + L   + +  P  + R+  L  + +S N + S+ P+  K + +L  LDL +N
Sbjct: 275 SLTKLQTINLSFNRFKVFPEVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNN 334

Query: 371 NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           ++  +PPELG     L+ L LDGNP R  R  IL +GT AVL+YL+D+IP
Sbjct: 335 DLLQIPPELGNC-VQLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 383



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/160 (43%), Positives = 96/160 (60%), Gaps = 8/160 (5%)

Query: 265 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRR 323
           +  L  L  D N L  VP D    +  L++L L  N +  LPE   F S   L+EL+L  
Sbjct: 1   MKRLKHLDCDANLLETVPPD-VGSMESLELLYLRRNKLRVLPE---FPSCRQLKELHLAE 56

Query: 324 MQLREAPTDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
            Q+ +   + L+ LQ + +LDL  N L+S+PE    L SL  LDLS+N+IS+LP  LG L
Sbjct: 57  NQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL 116

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
              L+ L L+GNPLR+IRR I+ +GT+ VLKYL+ KI ++
Sbjct: 117 H--LKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDD 154



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 28/198 (14%)

Query: 4   LDVEGNKLTVLSNNLI--ASWTMLTELIASKNLLNGMPETIGSLSRLI-RLDLHQNRILS 60
           LD    + T++ ++L      T++T +  SKN L  +P+ I  L  ++  ++L  N++  
Sbjct: 186 LDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLDINLSFNKLSF 245

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--------CVEAC 112
           I   +     L    + NN LS+LP E+  L+KL T++L  N+ K +         +EA 
Sbjct: 246 ISHELCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVFPEVLYRISTLEAV 305

Query: 113 QL-----------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
            +                  L+ LDL NN L  +PPE+G    LR LLL GNP R  R++
Sbjct: 306 LISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELGNCVQLRTLLLDGNPFRVPRAA 365

Query: 156 LVNGPTPALLKYLRSRLP 173
           ++   T A+L+YLR R+P
Sbjct: 366 ILMKGTAAVLEYLRDRIP 383


>gi|156551095|ref|XP_001603101.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Nasonia
           vitripennis]
          Length = 591

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 135/431 (31%), Positives = 216/431 (50%), Gaps = 48/431 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  NKL  L  + + S   L +L  S N L  +   +G L ++ RLD H N + S P 
Sbjct: 192 LDLNHNKLKELPPD-VMSMRALKKLDVSNNRLE-VVHPLGELRKIERLDFHMNNLSSFPD 249

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
            ++GC SL E  + +N+++ +    L  L +L  L+L +N+++    E   L  +  LDL
Sbjct: 250 -VNGCTSLHELCLSHNSITEIDVNCLESLGQLKILNLSNNEIEVIPEEIIMLINVEQLDL 308

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL-PENEDSE- 179
           S N++S +P  +G M  L+   + GN +R +R  +V+  TP ++K+LR  + P N ++  
Sbjct: 309 SYNNISEIPGCVGVMPNLQNFAIDGNKVRNIRRDIVSCGTPRIMKHLRQTINPTNTETSN 368

Query: 180 ------ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNS 230
                 ++ +  D  TM       +K LSL G NL+ +P E++E     E+T +DLSRN 
Sbjct: 369 SPLRVCSANSYPDKYTMRN-----AKLLSLVGQNLAEVPDELFENAKEAEVTCVDLSRNK 423

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           +Q L   +S   S   L LS N + + P+ +  SL  L  L L  N L  +P+     + 
Sbjct: 424 LQVLTDAMSKVTSTTDLKLSYNLLAELPEWLGESLERLRYLDLSKNLLTSLPA-SLSQLR 482

Query: 291 MLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
           +L  +++S+N                        +  E P  I  +  L IL  + N + 
Sbjct: 483 LLVEINISFN------------------------KFEEMPECIYEIAGLEILIANDNKMS 518

Query: 351 SI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTK 409
            I      NL  L  LDLS+NNI  +PPELG L+ +L+ L L GN  +  R+  L +GT+
Sbjct: 519 CINVPALSNLKRLAHLDLSNNNIGYVPPELGNLK-NLRMLSLSGNCFKQPRQATLMKGTE 577

Query: 410 AVLKYLKDKIP 420
            +L YL+++IP
Sbjct: 578 EILAYLRNRIP 588



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 33/215 (15%)

Query: 216 WEAGEITKLDLSRNS-----------------------IQELPPELSSCASLQTLILSRN 252
           WE   +  LDLS NS                       ++ LP E+ S   L+ L LS N
Sbjct: 69  WEYEPLKSLDLSSNSLTKLSEDVKYLGDLVNLDIHDNLLESLPEEIGSLTKLRKLNLSSN 128

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
           K++  P     SL+ L CL L +N ++++ S    D+ ML+ L+LS N + SLP    + 
Sbjct: 129 KLRTLPCKFF-SLAELRCLDLKSNLIKEL-SPAIGDLVMLEYLNLSSNELTSLPAGLGY- 185

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDN 370
            L  L  L L   +L+E P D++ ++ L+ LD+S N L+ + P G   L  +  LD   N
Sbjct: 186 -LVRLIALDLNHNKLKELPPDVMSMRALKKLDVSNNRLEVVHPLG--ELRKIERLDFHMN 242

Query: 371 NISALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
           N+S+ P   G    SL  L L  N +  I    L+
Sbjct: 243 NLSSFPDVNGC--TSLHELCLSHNSITEIDVNCLE 275


>gi|345802228|ref|XP_547338.3| PREDICTED: leucine-rich repeat-containing protein 40 [Canis lupus
           familiaris]
          Length = 631

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 141/454 (31%), Positives = 222/454 (48%), Gaps = 86/454 (18%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG----------------- 67
           L +L  S N L  +P +  SLS L+RL++  N++ S+P  ISG                 
Sbjct: 205 LEDLDISNNRLTTVPASFSSLSSLVRLNISSNQLKSLPVEISGMKRLKHLDCNSNLLETV 264

Query: 68  ----------------------------CCSLAEFYMGNNALSAL-PAELGKLSKLGTLD 98
                                       C  L E ++G N +  L P  L  L+ +  LD
Sbjct: 265 PPELANMESLELLYLRRNKLRFLPEFPSCRLLKELHVGENQIEILGPEHLKHLNSILVLD 324

Query: 99  LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
           L  N+L+    E   L+ L  LDLSNN +S LP  +GK+  L+ L L GNPLRT+R  ++
Sbjct: 325 LRDNKLRSVPDEITLLQSLERLDLSNNDISSLPCSLGKL-PLKFLALEGNPLRTIRREII 383

Query: 158 NGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV----TSKELSLEGMNLSAI 211
           N  T  +LKYLRS++ ++  +++ +  E  +T+   +R++V    T K L       + I
Sbjct: 384 NKGTQEVLKYLRSKIKDDGPNQSDSVVETAMTLPSESRVNVHAIITLKILDYSDKQTTLI 443

Query: 212 PSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAILTSLSS 267
           P E+++A +   IT ++ S+N + E+P  +     + + + LS NK+  +    L  L  
Sbjct: 444 PDEVFDAVKSNIITSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNKLS-FISLELCMLQK 502

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L+ L L NN L  +P +  + +  LQ ++LS+N         F  LP +         L 
Sbjct: 503 LTFLDLRNNFLNSLPEE-MESLIRLQTINLSFN--------RFKILPDV---------LY 544

Query: 328 EAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
             PT       L  + +S N + S+ P+  K + +L  LDL +N++  +PPELG    +L
Sbjct: 545 HIPT-------LETILISNNQVGSVDPQKMKAMENLITLDLQNNDLLQIPPELGNC-VNL 596

Query: 387 QALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           + L LDGNP R  R  IL +GT A+L+YL+D+IP
Sbjct: 597 RTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 630



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 176/350 (50%), Gaps = 47/350 (13%)

Query: 77  GNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 134
            N  LS   AE   + + L  L L SNQL+    +   L  L+VLD+ +N L+ LP  I 
Sbjct: 95  ANQNLSFSAAERWWEQTDLTKLILSSNQLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIR 154

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
           ++  L+KL ++ N L+ L   + N      L+ L                          
Sbjct: 155 ELENLQKLNVSHNKLQILPEEITN------LRNL-------------------------- 182

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
               K L L+   L+ IP    +   +  LD+S N +  +P   SS +SL  L +S N++
Sbjct: 183 ----KGLYLQHNELTRIPEGFEQLFNLEDLDISNNRLTTVPASFSSLSSLVRLNISSNQL 238

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 313
           K  P  I + +  L  L  ++N L  VP +   ++  L++L L  N +  LPE   F S 
Sbjct: 239 KSLPVEI-SGMKRLKHLDCNSNLLETVPPE-LANMESLELLYLRRNKLRFLPE---FPSC 293

Query: 314 PHLQELYLRRMQLRE-APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             L+EL++   Q+    P  +  L  + +LDL  N L+S+P+    L SL  LDLS+N+I
Sbjct: 294 RLLKELHVGENQIEILGPEHLKHLNSILVLDLRDNKLRSVPDEITLLQSLERLDLSNNDI 353

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
           S+LP  LG L   L+ L L+GNPLR+IRR I+++GT+ VLKYL+ KI ++
Sbjct: 354 SSLPCSLGKL--PLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDD 401



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 163/378 (43%), Gaps = 62/378 (16%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +L +  + +N L 
Sbjct: 111 TDLTKLILSSNQLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLQ 170

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 141
            LP E+  L  L  L L  N+L        QL  L  LD+SNN L+ +P     +++L +
Sbjct: 171 ILPEEITNLRNLKGLYLQHNELTRIPEGFEQLFNLEDLDISNNRLTTVPASFSSLSSLVR 230

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 201
           L ++ N L++L                                   I+   RL    K L
Sbjct: 231 LNISSNQLKSLPVE--------------------------------ISGMKRL----KHL 254

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
                 L  +P E+     +  L L RN ++ L PE  SC  L+ L +  N+I+      
Sbjct: 255 DCNSNLLETVPPELANMESLELLYLRRNKLRFL-PEFPSCRLLKELHVGENQIEILGPEH 313

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 320
           L  L+S+  L L +N LR VP D    +  L+ LDLS N I+SLP       LP L+ L 
Sbjct: 314 LKHLNSILVLDLRDNKLRSVP-DEITLLQSLERLDLSNNDISSLP--CSLGKLP-LKFLA 369

Query: 321 L--------RRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-----------GFKNLTS 361
           L        RR  + +   ++L+  + +I D   N   S+ E               + +
Sbjct: 370 LEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPNQSDSVVETAMTLPSESRVNVHAIIT 429

Query: 362 LTELDLSDNNISALPPEL 379
           L  LD SD   + +P E+
Sbjct: 430 LKILDYSDKQTTLIPDEV 447



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 85/174 (48%), Gaps = 24/174 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S +++  NKL+ +S  L      LT L    N LN +PE + SL RL  ++L  NR   
Sbjct: 480 VSDVNLSFNKLSFISLEL-CMLQKLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKI 538

Query: 61  IPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 119
           +P  +    +L    + NN + ++ P ++  +  L TLDL                    
Sbjct: 539 LPDVLYHIPTLETILISNNQVGSVDPQKMKAMENLITLDLQ------------------- 579

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
              NN L  +PPE+G    LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 580 ---NNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 630


>gi|327282314|ref|XP_003225888.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Anolis
           carolinensis]
          Length = 605

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 135/434 (31%), Positives = 219/434 (50%), Gaps = 43/434 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  N+L  L    I++   L +L  +KN L  +P  + +++ L +L L +N++  
Sbjct: 200 LVQLNLSHNQLKFLPAE-ISAMKSLRQLDCTKNYLETIPPELANMASLEQLYLRRNKLRY 258

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 118
           +P  +  C  L E ++G N +  L AE L  L+ L  LDL  N+LK    E   L  +  
Sbjct: 259 LPD-LPSCTVLKELHVGENQIEMLKAEHLKHLNSLCVLDLRENKLKSVPDEIALLEGIER 317

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP-ENED 177
           LDLSNN +S LP ++G ++ L+ L L GNPLRT+R  ++   T  +LKYLR+++  +NE 
Sbjct: 318 LDLSNNDISSLPCKLGNLSQLKFLALEGNPLRTIRRDILQKGTQEILKYLRNKIQDDNEI 377

Query: 178 SEASTTKEDLITMATRLSV------TSKELSLEGMNLSAIPSEIWEA---GEITKLDLSR 228
                     +T+ ++L V        K L       + IP E+  A     +T ++ S+
Sbjct: 378 RPNGVLPVTAMTLPSQLDVNLHALTALKTLDYSEKQATVIPDEVLNAVGNNPVTTVNFSK 437

Query: 229 NSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
           N + E+P  +     ++  +  S NK+       L  L  L+ L + NN L  +P D  +
Sbjct: 438 NHLTEIPARIVELKETVCDINFSFNKLFSV-SLELCMLYRLTHLDVRNNCLTSLP-DEME 495

Query: 288 DIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
            +  LQI++L++N                        + +  P  + R+  L  + L  N
Sbjct: 496 ALGKLQIINLAFN------------------------RFKVFPDILYRIPTLEAILLGNN 531

Query: 348 SLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDR 406
            + S+ P   K L  L+ LDL +N+I  +PPELG    SL+ L L+GNP R+ R TIL +
Sbjct: 532 QVGSLDPLQIKKLDQLSTLDLQNNDILHVPPELGNCT-SLRTLLLEGNPFRTPRVTILAK 590

Query: 407 GTKAVLKYLKDKIP 420
           GT AVL+YL+ +IP
Sbjct: 591 GTDAVLEYLRSRIP 604



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 167/309 (54%), Gaps = 44/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL-PE 174
           L+VLD+ +N L+ LP  IG +  L+KL ++ N L  L   L+       LK+LRS L   
Sbjct: 108 LTVLDIHDNQLTSLPLAIGSLENLQKLNVSHNKLTDLPEELLQ------LKHLRSLLLQH 161

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
           NE S        LI++        +EL +   ++SAIP+       + +L+LS N ++ L
Sbjct: 162 NELSHLPDEFGKLISL--------EELDISNNHVSAIPTSFAFLTNLVQLNLSHNQLKFL 213

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P E+S+  SL+ L  ++N ++  P   L +++SL  L L  N LR +P     D+P   +
Sbjct: 214 PAEISAMKSLRQLDCTKNYLETIPPE-LANMASLEQLYLRRNKLRYLP-----DLPSCTV 267

Query: 295 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
           L                     +EL++   Q+     + L+ L  L +LDL +N L+S+P
Sbjct: 268 L---------------------KELHVGENQIEMLKAEHLKHLNSLCVLDLRENKLKSVP 306

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L  +  LDLS+N+IS+LP +LG L   L+ L L+GNPLR+IRR IL +GT+ +LK
Sbjct: 307 DEIALLEGIERLDLSNNDISSLPCKLGNLS-QLKFLALEGNPLRTIRRDILQKGTQEILK 365

Query: 414 YLKDKIPEN 422
           YL++KI ++
Sbjct: 366 YLRNKIQDD 374



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 101/208 (48%), Gaps = 6/208 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R +  S  L+L G  LS +P  +W     T  +  +N              L  LILS N
Sbjct: 34  RAARKSGHLNLSGRELSEVPLHVWRINLDTPEEAKQNLSFGGADRWWEQTDLTKLILSSN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
           K+K   D  L  L +L+ L + +N L  +P      +  LQ L++S+N +  LPE     
Sbjct: 94  KLKCLSDD-LKLLPALTVLDIHDNQLTSLPL-AIGSLENLQKLNVSHNKLTDLPEE--LL 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
            L HL+ L L+  +L   P +  +L  L  LD+S N + +IP  F  LT+L +L+LS N 
Sbjct: 150 QLKHLRSLLLQHNELSHLPDEFGKLISLEELDISNNHVSAIPTSFAFLTNLVQLNLSHNQ 209

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSI 399
           +  LP E+  ++ SL+ L    N L +I
Sbjct: 210 LKFLPAEISAMK-SLRQLDCTKNYLETI 236


>gi|255087408|ref|XP_002505627.1| predicted protein [Micromonas sp. RCC299]
 gi|226520897|gb|ACO66885.1| predicted protein [Micromonas sp. RCC299]
          Length = 573

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 220/457 (48%), Gaps = 59/457 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  N+LT +    I   T L  L    N L  +PE IG L+ L+ L L  N+  S
Sbjct: 99  LRELNLNSNQLTNVPAE-IGQLTSLEGLRLYGNRLTSVPEEIGQLTSLVVLVLGGNQFTS 157

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E  +  N L+++PAE+G+L+ LG L L  NQL     E  QL  L  L
Sbjct: 158 VPAEIGQLTALRELRLDGNRLTSVPAEIGQLTSLGELSLSGNQLTSVPAEIGQLTLLKGL 217

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS---RLPENE 176
           +L  N L+ LP EIG++T+L  LLL  N L ++         PA ++ LR+   R+  ++
Sbjct: 218 ELYYNQLTSLPAEIGQLTSLEHLLLDNNQLTSV---------PAEIRELRAAGCRVDLDD 268

Query: 177 DSEASTTKE-------DLITMA---------TRLSVTSKELSLEGMNLSAIPSEIWEAGE 220
                 T E       DL+             RLS   + L L G NL+++P+EI +   
Sbjct: 269 GHWEGVTMENGRVVKLDLVEFGLIGALPAEVGRLSAL-RWLQLGGNNLTSVPAEIGQLTS 327

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
           +    LS N +  +P E+    SL+ L L  N++   P A +  L+SL+ L L +N L  
Sbjct: 328 LMTFGLSDNKLTSVPAEIGQLTSLEVLYLDHNRLASMP-AEIGRLTSLTTLFLSSNRLTS 386

Query: 281 VPSDGFKDIPMLQILDLSYN-IASLPEN---------------------PPFSSLPHLQE 318
           VP++    +  L+ L LS N + S+P                            L  L+ 
Sbjct: 387 VPAE-IGQLTSLKGLHLSRNQLTSVPAAIRDLRAAGCRLEDCDLTGLLPAEIGCLGALRL 445

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L L   +L   P +I +L  L +L+LS+N L S+P     LTSL  L LS N +++LP E
Sbjct: 446 LQLAGNELTSVPAEIGQLTSLEVLELSRNKLTSVPVEIGQLTSLERLYLSSNRLTSLPAE 505

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           +G L  SL+ L LD N L S+   I   G  A L++ 
Sbjct: 506 IGQL-TSLKRLYLDHNQLTSVPAEI---GQLAALQWF 538



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 191/400 (47%), Gaps = 46/400 (11%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           KL++E   LT +    +   + L +L    N L  +P  IG L+ L  L L  N++ S+P
Sbjct: 8   KLELEDFDLTGVVPAELGRLSALRKLSLHGNELTSLPAEIGQLTSLEGLRLFGNQLTSVP 67

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
           + I    +L E  +  N L ++PAE+G+L+ L  L+L+SNQL     E  QL  L  L L
Sbjct: 68  AEIGQLTALRELSLAANRLMSVPAEIGQLTSLRELNLNSNQLTNVPAEIGQLTSLEGLRL 127

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
             N L+ +P EIG++T+L  L+L GN   ++ + +  G   AL                 
Sbjct: 128 YGNRLTSVPEEIGQLTSLVVLVLGGNQFTSVPAEI--GQLTAL----------------- 168

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
                            +EL L+G  L+++P+EI +   + +L LS N +  +P E+   
Sbjct: 169 -----------------RELRLDGNRLTSVPAEIGQLTSLGELSLSGNQLTSVPAEIGQL 211

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSY 299
             L+ L L  N++   P A +  L+SL  L LDNN L  VP++    +       LD  +
Sbjct: 212 TLLKGLELYYNQLTSLP-AEIGQLTSLEHLLLDNNQLTSVPAEIRELRAAGCRVDLDDGH 270

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                 EN     L  L E  L    +   P ++ RL  LR L L  N+L S+P     L
Sbjct: 271 WEGVTMENGRVVKL-DLVEFGL----IGALPAEVGRLSALRWLQLGGNNLTSVPAEIGQL 325

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           TSL    LSDN ++++P E+G L  SL+ L LD N L S+
Sbjct: 326 TSLMTFGLSDNKLTSVPAEIGQL-TSLEVLYLDHNRLASM 364



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 200/418 (47%), Gaps = 45/418 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L ++GN+LT +    I   T L EL  S N L  +P  IG L+ L  L+L+ N++ S
Sbjct: 168 LRELRLDGNRLTSVPAE-IGQLTSLGELSLSGNQLTSVPAEIGQLTLLKGLELYYNQLTS 226

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQLRLSVL 119
           +P+ I    SL    + NN L+++PAE+ +L   G  +DL     +   +E    R+  L
Sbjct: 227 LPAEIGQLTSLEHLLLDNNQLTSVPAEIRELRAAGCRVDLDDGHWEGVTMENG--RVVKL 284

Query: 120 DLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           DL    L G LP E+G+++ LR L L GN L ++         PA +  L S +      
Sbjct: 285 DLVEFGLIGALPAEVGRLSALRWLQLGGNNLTSV---------PAEIGQLTSLMTFGLSD 335

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
              T+    I   T L V    L L+   L+++P+EI     +T L LS N +  +P E+
Sbjct: 336 NKLTSVPAEIGQLTSLEV----LYLDHNRLASMPAEIGRLTSLTTLFLSSNRLTSVPAEI 391

Query: 239 SSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDNN 276
               SL+ L LSRN++   P AI                      +  L +L  L+L  N
Sbjct: 392 GQLTSLKGLHLSRNQLTSVPAAIRDLRAAGCRLEDCDLTGLLPAEIGCLGALRLLQLAGN 451

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            L  VP++    +  L++L+LS N + S+P       L  L+ LYL   +L   P +I +
Sbjct: 452 ELTSVPAE-IGQLTSLEVLELSRNKLTSVP--VEIGQLTSLERLYLSSNRLTSLPAEIGQ 508

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG-LLEPSLQALRLD 392
           L  L+ L L  N L S+P     L +L   DL  N ++++P E+G LL   L++  +D
Sbjct: 509 LTSLKRLYLDHNQLTSVPAEIGQLAALQWFDLQRNELTSVPAEIGQLLRGRLRSWNVD 566


>gi|167519697|ref|XP_001744188.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777274|gb|EDQ90891.1| predicted protein [Monosiga brevicollis MX1]
          Length = 570

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 135/404 (33%), Positives = 210/404 (51%), Gaps = 41/404 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N L  +P  +GSLS + RLD+  N +  +PS ++    L E  +G N +  L
Sbjct: 197 LQELDIVHNRLTSLPTKLGSLSHITRLDVRYNALQRLPS-LASMTQLKELLVGYNQIHTL 255

Query: 85  PAELGKL--SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 141
             +LG L  + L  LD+  N++ +       LR L  L+LSNN +S LPPE+G + +++ 
Sbjct: 256 -GDLGALLPAGLVLLDVRDNKIADIPATIAALRQLERLELSNNDISSLPPELGLVRSIKA 314

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS--EASTTKEDLITMATRLSVT-S 198
           + L GNPLR+LR  +V   T A+L++LRSRLPE  +   EA    E +     +  +  +
Sbjct: 315 ISLDGNPLRSLRRDIVRRGTLAILEHLRSRLPETAEVEPEAQQYAEQVAQRERQTDLAQT 374

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS-LQTLILSRNKIKDW 257
             L+L    L  +PS+I++   + +  L +N +  LP ++   +S L  L L  N++   
Sbjct: 375 GALNLSNQGLDHVPSDIFQEA-VEQGTLQKNKLLHLPAQVDQLSSTLTHLDLGFNRLSTL 433

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
             AI   L  L  L+L+ N L  +P +    +  LQ L L +N         F++LP   
Sbjct: 434 SSAI-GLLPRLVSLELEGNALTSLPEE-LALLSELQDLGLGHN--------RFTALP--- 480

Query: 318 ELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISAL 375
                         D++R L+ L+ L L+ N + ++ P+       L  +DL +N I  +
Sbjct: 481 --------------DVVRHLRALQNLMLNDNQVSTVDPDVLLACPMLRCVDLHNNAIQQV 526

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           PP LGLL  +L  L+L+GN  R  R+TILD+GT AVL+YLK +I
Sbjct: 527 PPRLGLL--NLHTLKLEGNLFRMPRQTILDKGTGAVLEYLKSRI 568



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 134/247 (54%), Gaps = 29/247 (11%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           K L+L    L  +P  ++    +  L L  N+++ L P L   + L+ L  S N++ + P
Sbjct: 106 KALNLGQNCLENLPQSLYHLPALQSLKLDNNALRSLAPALRQLSELRELDASHNRLVELP 165

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
           ++ L  L  L+ L+L +N L  +P+  F  +  LQ LD+ +N + SLP      SL H+ 
Sbjct: 166 ES-LCDLPHLARLRLGHNQLESLPAP-FGQLEALQELDIVHNRLTSLPTK--LGSLSHIT 221

Query: 318 ELYLRRMQLREAPT--DILRLQQLRI---------------------LDLSQNSLQSIPE 354
            L +R   L+  P+   + +L++L +                     LD+  N +  IP 
Sbjct: 222 RLDVRYNALQRLPSLASMTQLKELLVGYNQIHTLGDLGALLPAGLVLLDVRDNKIADIPA 281

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
               L  L  L+LS+N+IS+LPPELGL+  S++A+ LDGNPLRS+RR I+ RGT A+L++
Sbjct: 282 TIAALRQLERLELSNNDISSLPPELGLVR-SIKAISLDGNPLRSLRRDIVRRGTLAILEH 340

Query: 415 LKDKIPE 421
           L+ ++PE
Sbjct: 341 LRSRLPE 347


>gi|395822105|ref|XP_003784364.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 40 [Otolemur garnettii]
          Length = 600

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 137/413 (33%), Positives = 219/413 (53%), Gaps = 33/413 (7%)

Query: 22  WTM-LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 80
           W++ L  L  S NLL  +P  +  +  L  + L +N++  +P     C  L E ++G N 
Sbjct: 206 WSLGLKHLDCSSNLLEAIPPELAGMESLELVYLWRNKLRFLPE-FPSCRLLKELHIGENQ 264

Query: 81  LSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
           +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP  +G +  
Sbjct: 265 IEVLKAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGNLH- 323

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV 196
           L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S++ +  E  +T+   +R++V
Sbjct: 324 LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSDSVTETAMTLPSESRVNV 383

Query: 197 ----TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQTLI- 248
               T K L        +IP E+++A +   IT ++ S+N + ++P  +     + + + 
Sbjct: 384 HAIVTLKTLDYSDKQTPSIPDEVFDAVKSNIITTVNFSKNQLGDVPKRIIELKEMVSDVN 443

Query: 249 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENP 308
           LS NK+  +    L  L  L+ L L            +  IP+L   + +YN+ SL E  
Sbjct: 444 LSFNKLS-FVSLELCMLQKLTFLDLR-----------YLLIPLLAFXN-NYNL-SLSEQE 489

Query: 309 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDL 367
             +SL     L L   + +  P  + R+  L  + +S N + S+ P+  K + +LT LDL
Sbjct: 490 --TSLSKSVTLSLNINRFKVLPEVLYRILTLETVLISNNQIGSVDPQKMKTMENLTTLDL 547

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            +N++  +PPELG    +L+ L LDGNP R  R  IL +GT AVL+YL+D+IP
Sbjct: 548 QNNDLLHIPPELGNC-VNLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 599



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 154/315 (48%), Gaps = 69/315 (21%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPE 174
           L+VLD+ +N L+ LPP IG++  L+KL ++ N L+ L   + N      L+ L+   L  
Sbjct: 107 LTVLDIHDNQLASLPPAIGELENLQKLNVSHNKLKILPGEIAN------LRNLKGLYLQH 160

Query: 175 NEDS------EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
           NE S      E  ++ EDL +       T +   +    ++   + +W  G +  LD S 
Sbjct: 161 NELSCISEGFEQLSSLEDLHSRRGCYPFTGESTCVCDYMIAV--ASLWSLG-LKHLDCSS 217

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N ++ +PPEL+   SL+ + L RNK++                                 
Sbjct: 218 NLLEAIPPELAGMESLELVYLWRNKLR--------------------------------- 244

Query: 289 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQN 347
                          LPE   F S   L+EL++   Q+     + L+ L  + +LDL  N
Sbjct: 245 --------------FLPE---FPSCRLLKELHIGENQIEVLKAEHLKHLNSILVLDLRDN 287

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
            L+S+P+    L SL  LDLS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+++G
Sbjct: 288 KLKSVPDEITLLQSLERLDLSNNDISSLPYSLGNLH--LKFLALEGNPLRTIRREIINKG 345

Query: 408 TKAVLKYLKDKIPEN 422
           T+ VLKYL+ KI ++
Sbjct: 346 TQEVLKYLRSKIKDD 360



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 158/370 (42%), Gaps = 49/370 (13%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
           A++NL  G  E     + L +L +  N++ S+   +    +L    + +N L++LP  +G
Sbjct: 66  ANQNLTFGATERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLASLPPAIG 125

Query: 90  KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           +L  L  L++  N+LK                       LP EI  +  L+ L L  N L
Sbjct: 126 ELENLQKLNVSHNKLK----------------------ILPGEIANLRNLKGLYLQHNEL 163

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
             +        +   L   R   P     E++   + +I +A+  S+  K L      L 
Sbjct: 164 SCISEGFEQLSSLEDLHSRRGCYPFT--GESTCVCDYMIAVASLWSLGLKHLDCSSNLLE 221

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
           AIP E+     +  + L RN ++ L PE  SC  L+ L +  N+I+      L  L+S+ 
Sbjct: 222 AIPPELAGMESLELVYLWRNKLRFL-PEFPSCRLLKELHIGENQIEVLKAEHLKHLNSIL 280

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL------- 321
            L L +N L+ VP D    +  L+ LDLS N I+SLP +    +L HL+ L L       
Sbjct: 281 VLDLRDNKLKSVP-DEITLLQSLERLDLSNNDISSLPYS--LGNL-HLKFLALEGNPLRT 336

Query: 322 -RRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-----------GFKNLTSLTELDLSD 369
            RR  + +   ++L+  + +I D   +   S+ E               + +L  LD SD
Sbjct: 337 IRREIINKGTQEVLKYLRSKIKDDGPSQSDSVTETAMTLPSESRVNVHAIVTLKTLDYSD 396

Query: 370 NNISALPPEL 379
               ++P E+
Sbjct: 397 KQTPSIPDEV 406


>gi|345322696|ref|XP_001505628.2| PREDICTED: leucine-rich repeat-containing protein 40
           [Ornithorhynchus anatinus]
          Length = 612

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 136/418 (32%), Positives = 211/418 (50%), Gaps = 46/418 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+    L +L  + NLL  +P  + S+  L  L L +N++ SIP     C SL E ++G 
Sbjct: 224 ISGMKRLKQLDCTCNLLETIPSELASMESLELLYLRRNKLRSIPE-FPFCRSLKELHVGE 282

Query: 79  NALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           N +  + AE L  LS +  LDL  N+LK    E   L+ L  LDL+NN +S LP  +G +
Sbjct: 283 NQIEVIGAEHLKHLSSINVLDLRDNKLKSIPDEITLLQALERLDLTNNDISSLPYALGNL 342

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL-----PENEDSEASTTKEDLITMA 191
             L+ L L GNP+RT+R  L+   T  L+KYLRS++     P+NE +   T     +   
Sbjct: 343 PHLKFLALEGNPMRTIRRDLLTKGTQELMKYLRSKIKDDAPPQNETTTTGTAMT--LPSE 400

Query: 192 TRLS----VTSKELSLEGMNLSAIPSEIWEA---GEITKLDLSRNSIQELPPELSSCA-S 243
           +R++    VT K L       +AIP E+++A     +T ++ S+N + E+P  +     +
Sbjct: 401 SRVNVHAIVTLKILEYSEKQTTAIPDEVFDAVGRNTVTSINFSKNQLNEVPKRIVELKET 460

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 302
           +  + LS NK+      I + L  L+ L + NN L  +P D    +  LQ ++LS+N   
Sbjct: 461 VSDVNLSFNKLSLISLEI-SVLQKLTHLDIRNNLLTALP-DEMSALKKLQTINLSFNRFK 518

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
           + P+      +P L+ +     Q+     D LR+                    K +  L
Sbjct: 519 TFPD--VLYCIPTLETILFSNNQV--GSVDALRM--------------------KKMDKL 554

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
             LDL +N++  +PPELG    +L+ L L+GNP R  R  IL +GT AVL+YL+D+IP
Sbjct: 555 ATLDLQNNDLLQVPPELGNCM-TLRTLLLEGNPFRIPRAAILAKGTAAVLEYLRDRIP 611



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 44/309 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+VLD+ +N L+ LP  +G++  L++L ++ N L+ L         P  +K LR+     
Sbjct: 115 LTVLDVHDNQLASLPCAVGELENLQRLNVSHNKLKIL---------PEEIKNLRNL---- 161

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                  K L L+   L+ IP    +   + +LD+S N +  +P
Sbjct: 162 -----------------------KSLFLQNNELTCIPEGFGQLLNLEELDISNNHLSSVP 198

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              S+  +L  L L+RN++K  P  I + +  L  L    N L  +PS+    +  L++L
Sbjct: 199 ASFSTLTNLVRLNLARNQLKSLPTEI-SGMKRLKQLDCTCNLLETIPSE-LASMESLELL 256

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L  N + S+PE P   SL   +EL++   Q+     + L+ L  + +LDL  N L+SIP
Sbjct: 257 YLRRNKLRSIPEFPFCRSL---KELHVGENQIEVIGAEHLKHLSSINVLDLRDNKLKSIP 313

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +    L +L  LDL++N+IS+LP  LG L P L+ L L+GNP+R+IRR +L +GT+ ++K
Sbjct: 314 DEITLLQALERLDLTNNDISSLPYALGNL-PHLKFLALEGNPMRTIRRDLLTKGTQELMK 372

Query: 414 YLKDKIPEN 422
           YL+ KI ++
Sbjct: 373 YLRSKIKDD 381



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 146/316 (46%), Gaps = 46/316 (14%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T LT+LI S N L  + + +  L  L  LD+H N++ S+P ++    +L    + +N L 
Sbjct: 90  TDLTKLILSNNKLQTLSDDLRLLPALTVLDVHDNQLASLPCAVGELENLQRLNVSHNKLK 149

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVE---ACQLRLSVLDLSNNSLSGLPPEIGKMTTL 139
            LP E+  L  L +L L +N+L   C+       L L  LD+SNN LS +P     +T L
Sbjct: 150 ILPEEIKNLRNLKSLFLQNNELT--CIPEGFGQLLNLEELDISNNHLSSVPASFSTLTNL 207

Query: 140 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 199
            +L L  N L++L       PT                          I+   RL    K
Sbjct: 208 VRLNLARNQLKSL-------PTE-------------------------ISGMKRL----K 231

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           +L      L  IPSE+     +  L L RN ++ + PE   C SL+ L +  N+I+    
Sbjct: 232 QLDCTCNLLETIPSELASMESLELLYLRRNKLRSI-PEFPFCRSLKELHVGENQIEVIGA 290

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 318
             L  LSS++ L L +N L+ +P D    +  L+ LDL+ N I+SLP      +LPHL+ 
Sbjct: 291 EHLKHLSSINVLDLRDNKLKSIP-DEITLLQALERLDLTNNDISSLPY--ALGNLPHLKF 347

Query: 319 LYLRRMQLREAPTDIL 334
           L L    +R    D+L
Sbjct: 348 LALEGNPMRTIRRDLL 363



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 5/135 (3%)

Query: 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 324
           + L+ L L NN L Q  SD  + +P L +LD+  N +ASLP       L +LQ L +   
Sbjct: 90  TDLTKLILSNNKL-QTLSDDLRLLPALTVLDVHDNQLASLP--CAVGELENLQRLNVSHN 146

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
           +L+  P +I  L+ L+ L L  N L  IPEGF  L +L ELD+S+N++S++P     L  
Sbjct: 147 KLKILPEEIKNLRNLKSLFLQNNELTCIPEGFGQLLNLEELDISNNHLSSVPASFSTL-T 205

Query: 385 SLQALRLDGNPLRSI 399
           +L  L L  N L+S+
Sbjct: 206 NLVRLNLARNQLKSL 220



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 5/173 (2%)

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
           + +P  +W     T  + ++N              L  LILS NK++   D  L  L +L
Sbjct: 57  AFVPQTVWRINLDTPEEANQNLSFGAADRWWEQTDLTKLILSNNKLQTLSDD-LRLLPAL 115

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 327
           + L + +N L  +P     ++  LQ L++S+N +  LPE     +L +L+ L+L+  +L 
Sbjct: 116 TVLDVHDNQLASLPC-AVGELENLQRLNVSHNKLKILPEE--IKNLRNLKSLFLQNNELT 172

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
             P    +L  L  LD+S N L S+P  F  LT+L  L+L+ N + +LP E+ 
Sbjct: 173 CIPEGFGQLLNLEELDISNNHLSSVPASFSTLTNLVRLNLARNQLKSLPTEIS 225


>gi|221117516|ref|XP_002157758.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Hydra
           magnipapillata]
          Length = 608

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 146/464 (31%), Positives = 217/464 (46%), Gaps = 97/464 (20%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL  S N L  +PE+ GSL ++ +LDL +N + S+P+S     SL    +  N L+ L
Sbjct: 173 LEELDLSDNKLTSLPESFGSLVQIKKLDLSKNLLTSLPNSFDSLKSLINLNLSTNKLTVL 232

Query: 85  PAELGKLSKLG----------------------------------------------TLD 98
           P   GKL+ L                                               +L 
Sbjct: 233 PKGFGKLTSLEIFECSYNLITTFTTFDDQTNIKQLFLGYNRIQKIEDNAFEKMQSLVSLS 292

Query: 99  LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
           L  N + E      +LR L   DLSNNSLS LP  +GKM  L+ L L GN +R++R  +V
Sbjct: 293 LRDNAISEIPESFTKLRTLERADLSNNSLSTLPNAVGKM-NLKSLTLDGNSMRSIRRDIV 351

Query: 158 NGPTPALLKYLRSRLPE-----------------NEDSEASTTKEDLITMATRLSV-TSK 199
           +  T A+L YL+SRLPE                 N++ +    +E+   +  +  + T+K
Sbjct: 352 DRGTNAILAYLKSRLPEEKVPDEEIKIPKSVSKVNDNDQQKKIQENNKAVTDQFLIATTK 411

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS-LQTLILSRNKIKDWP 258
            LS  G + S   S      +I+K+ +  N +   P E+ + AS L  L +S NK+ +  
Sbjct: 412 NLSFSGGSGSIPSSFWLPGAQISKISIQHNGLTVYPLEIMNYASTLSELDISHNKLSNIL 471

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQ 317
           D +              N L +           L  LDLS+N+ +SLP +   S L HL 
Sbjct: 472 DTV--------------NILTK-----------LVFLDLSHNVLSSLPSS--ISQLEHLL 504

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP-EGFKNLTSLTELDLSDNNISALP 376
           E+ L   +    P  + + ++L+ L LS N +  I   G   +  L  LDLS+NNI+ +P
Sbjct: 505 EVVLSFNKYSSIPPCLFKCKKLQTLLLSNNQITDIDVVGLLEMKCLRTLDLSNNNIACVP 564

Query: 377 PELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           P+LG +E  LQ+L LDGNP R+ R  IL +GT+ +L YL+D+IP
Sbjct: 565 PQLGNVE-WLQSLNLDGNPFRNPRAQILMKGTQNLLAYLRDRIP 607



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 164/352 (46%), Gaps = 65/352 (18%)

Query: 71  LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLP 130
           L +  + +N +  +P E+  L  L  LD H N     C+E                  L 
Sbjct: 81  LKKLILASNEIKCIPNEVKYLPALNVLDAHDN-----CIEY-----------------LS 118

Query: 131 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 190
            EI ++  L KL L+ N L +L  SL                                  
Sbjct: 119 DEISELKELGKLHLSHNKLTSLPDSLC--------------------------------Q 146

Query: 191 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 250
           AT L V    L L G +L ++P        + +LDLS N +  LP    S   ++ L LS
Sbjct: 147 ATALKV----LLLAGNSLQSLPVNFGFLINLEELDLSDNKLTSLPESFGSLVQIKKLDLS 202

Query: 251 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPF 310
           +N +   P++   SL SL  L L  N L  +P  GF  +  L+I + SYN+  +     F
Sbjct: 203 KNLLTSLPNS-FDSLKSLINLNLSTNKLTVLPK-GFGKLTSLEIFECSYNL--ITTFTTF 258

Query: 311 SSLPHLQELYLRRMQLREAPTDIL-RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
               ++++L+L   ++++   +   ++Q L  L L  N++  IPE F  L +L   DLS+
Sbjct: 259 DDQTNIKQLFLGYNRIQKIEDNAFEKMQSLVSLSLRDNAISEIPESFTKLRTLERADLSN 318

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
           N++S LP  +G +  +L++L LDGN +RSIRR I+DRGT A+L YLK ++PE
Sbjct: 319 NSLSTLPNAVGKM--NLKSLTLDGNSMRSIRRDIVDRGTNAILAYLKSRLPE 368



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 104/175 (59%), Gaps = 2/175 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +SK+ ++ N LTV    ++   + L+EL  S N L+ + +T+  L++L+ LDL  N + S
Sbjct: 433 ISKISIQHNGLTVYPLEIMNYASTLSELDISHNKLSNILDTVNILTKLVFLDLSHNVLSS 492

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-CVEACQLR-LSV 118
           +PSSIS    L E  +  N  S++P  L K  KL TL L +NQ+ +   V   +++ L  
Sbjct: 493 LPSSISQLEHLLEVVLSFNKYSSIPPCLFKCKKLQTLLLSNNQITDIDVVGLLEMKCLRT 552

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           LDLSNN+++ +PP++G +  L+ L L GNP R  R+ ++   T  LL YLR R+P
Sbjct: 553 LDLSNNNIACVPPQLGNVEWLQSLNLDGNPFRNPRAQILMKGTQNLLAYLRDRIP 607



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 35/195 (17%)

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ--ELPPELSSCASLQTLILSRNKIKDW 257
           +L+L G +L  +P ++W       LD+   +I   E+         L+ LIL+ N+IK  
Sbjct: 39  QLNLSGRSLKEVPLDVWRIN----LDIPSQTISLGEVDERWWDQVDLKKLILASNEIKCI 94

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P+ +                         K +P L +LD   N      +   S L  L 
Sbjct: 95  PNEV-------------------------KYLPALNVLDAHDNCIEYLSDE-ISELKELG 128

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L+L   +L   P  + +   L++L L+ NSLQS+P  F  L +L ELDLSDN +++LP 
Sbjct: 129 KLHLSHNKLTSLPDSLCQATALKVLLLAGNSLQSLPVNFGFLINLEELDLSDNKLTSLPE 188

Query: 378 ELGLLEPSLQALRLD 392
             G L   +Q  +LD
Sbjct: 189 SFGSL---VQIKKLD 200



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 121/288 (42%), Gaps = 23/288 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N++  + N  +     L  L A  N +  + + I  L  L +L L  N++ S
Sbjct: 81  LKKLILASNEIKCIPNE-VKYLPALNVLDAHDNCIEYLSDEISELKELGKLHLSHNKLTS 139

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S+    +L    +  N+L +LP   G L  L  LDL  N+L         L ++  L
Sbjct: 140 LPDSLCQATALKVLLLAGNSLQSLPVNFGFLINLEELDLSDNKLTSLPESFGSLVQIKKL 199

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DLS N L+ LP     + +L  L L+ N L  L                  +L   E  E
Sbjct: 200 DLSKNLLTSLPNSFDSLKSLINLNLSTNKLTVLPKGF-------------GKLTSLEIFE 246

Query: 180 ASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPP 236
            S    +LIT  T     +  K+L L    +  I    +E  + +  L L  N+I E+P 
Sbjct: 247 CSY---NLITTFTTFDDQTNIKQLFLGYNRIQKIEDNAFEKMQSLVSLSLRDNAISEIPE 303

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
             +   +L+   LS N +   P+A+     +L  L LD N +R +  D
Sbjct: 304 SFTKLRTLERADLSNNSLSTLPNAV--GKMNLKSLTLDGNSMRSIRRD 349


>gi|110763972|ref|XP_395550.3| PREDICTED: leucine-rich repeat-containing protein 40-like [Apis
           mellifera]
          Length = 602

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 228/482 (47%), Gaps = 99/482 (20%)

Query: 6   VEGNKLTVLSNNL------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 59
           +E  +L++ +NN+         + MLT L  S N L  +P  +G L RLI LDL+ N + 
Sbjct: 154 IELRQLSLKNNNIKQLDPAFGDFIMLTYLDLSYNNLTELPIGMGYLVRLISLDLNHNILK 213

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY------------ 107
            +P  ++   +L +     N L  LP  LG+L K+ T+ L +N+L  +            
Sbjct: 214 ELPPDLTNMRALQKLNASYNDLEILPP-LGELRKVETVMLQTNKLTTFPDMSGCIQLRIL 272

Query: 108 -------------CVEAC-QLR---------------------LSVLDLSNNSLSGLPPE 132
                        C+E   QL+                     L + DLS N ++ +P  
Sbjct: 273 HLADNNITEIDMSCLEGVGQLKTLTLGNNQIESIPEEIIKLVYLEIFDLSYNKITLIPEH 332

Query: 133 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NEDSEASTT-------K 184
           IG M  +++L++ GN ++ +R+ ++   T  +LKY++  L   N DS+   T        
Sbjct: 333 IGLMPNIKQLIIDGNDIKNIRTDIIRCGTSRILKYIQQGLKSTNLDSKKHVTLNTSTNIY 392

Query: 185 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNSIQELPPELSSC 241
            D  TM      ++K LSL G NL+ IP E+ E     ++  +DLSRN+   LP EL   
Sbjct: 393 PDRYTMH-----STKLLSLAGQNLTEIPQEVLENACKADVGTVDLSRNNFSTLPDELH-- 445

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 300
                              I+T ++    LKL +N L  +P    +    LQILDLS N 
Sbjct: 446 -------------------IITKVAD---LKLTSNQLTHIPEWICEKYKYLQILDLSKNC 483

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-GFKNL 359
           + SLP N     L +LQEL +   + +E P  +  +  L IL  + N + +I     + L
Sbjct: 484 LESLPSN--IGLLKYLQELNISFNRYKEIPESVYDVSSLEILIANDNLITNIDILSLQKL 541

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
             LT L+L++NNI  +PPELG L+ +L+ L L GN  +  R+ IL + T+ +L YL+++I
Sbjct: 542 QKLTILNLANNNIGYIPPELGNLK-NLRNLSLSGNCFKQPRQAILMKSTEEILAYLRNRI 600

Query: 420 PE 421
           P+
Sbjct: 601 PQ 602



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 21/174 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L +  N+LT +   +   +  L  L  SKN L  +P  IG L  L  L++  NR   
Sbjct: 450 VADLKLTSNQLTHIPEWICEKYKYLQILDLSKNCLESLPSNIGLLKYLQELNISFNRYKE 509

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IP S+    SL E  + N+ L         ++ +  L L   Q           +L++L+
Sbjct: 510 IPESVYDVSSL-EILIANDNL---------ITNIDILSLQKLQ-----------KLTILN 548

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           L+NN++  +PPE+G +  LR L L+GN  +  R +++   T  +L YLR+R+P+
Sbjct: 549 LANNNIGYIPPELGNLKNLRNLSLSGNCFKQPRQAILMKSTEEILAYLRNRIPQ 602



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 48/241 (19%)

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
            + R   ++++E S    ++I ++ R    +  L+L    L  +P  +W        DL+
Sbjct: 14  FKKRTKNDDNAELS----EVIIISAR---KNGNLNLSSKGLFTVPDRVWTIN-----DLT 61

Query: 228 RNSIQELPPELSSCAS---------LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
              I+ L  EL              L+ L LS N +K   D+ +  L+ L+ L L NN L
Sbjct: 62  EEEIKNLHVELDYIHDNERWWEQEPLKMLDLSCNSLKAI-DSKIECLTELTTLYLHNNLL 120

Query: 279 RQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
             +P +   ++  L+IL+LS        N     LPH  E Y              +L +
Sbjct: 121 EDLPIE-IGNLKKLEILNLS--------NNKLEKLPH--EFY--------------KLIE 155

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           LR L L  N+++ +   F +   LT LDLS NN++ LP  +G L   L +L L+ N L+ 
Sbjct: 156 LRQLSLKNNNIKQLDPAFGDFIMLTYLDLSYNNLTELPIGMGYL-VRLISLDLNHNILKE 214

Query: 399 I 399
           +
Sbjct: 215 L 215


>gi|418744843|ref|ZP_13301188.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794174|gb|EKR92084.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 511

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 140/429 (32%), Positives = 206/429 (48%), Gaps = 44/429 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL++  N+L VL    I +   L  L    N L  +P  IG L +L  L+L  N++  
Sbjct: 63  LEKLNLVNNQLAVLVQE-IGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLENNQLAV 121

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +   I     L    + NN L+ LP E+GKL KL  LDL  NQL     E  QL  L  L
Sbjct: 122 LVQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKLEKLDLSDNQLATLPNEIGQLESLQYL 181

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L NN L  LP EI K+  L++L L  N  RTL   +              +L   ED +
Sbjct: 182 SLVNNRLKTLPKEIWKLQKLKRLYLGDNQFRTLPKEI-------------DQLQNLEDLD 228

Query: 180 ASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
            S  +  L+T+   +      K L L+   L+ +P EI +   +  L LS N +  LP E
Sbjct: 229 VSNNQ--LVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLENLDSLILSNNQLTTLPQE 286

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           + +   LQ L LS N+++  P  I T L  L  L L++N L  +P +    +  L+ L+L
Sbjct: 287 IGTLQKLQYLNLSNNQLRTLPQEIGT-LQELEWLNLEHNQLAALPQE-IDQLQNLEDLNL 344

Query: 298 SYN-IASLP--------------ENPPFSSLPH-------LQELYLRRMQLREAPTDILR 335
           S N + +LP              E+   ++LP+       LQ L+L   +L+  P +I +
Sbjct: 345 SNNRLKTLPKGIWKLQRLEWLYLEHAHLTTLPNEIGTLQKLQRLFLSNNRLKTLPKEIWK 404

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L++L  L L  N L S+P+    L +L  LDLS+N +  LP E+G L+ SL+ L L GNP
Sbjct: 405 LRKLEWLYLKNNKLGSLPKEIDQLQNLEYLDLSNNQLRTLPNEIGQLQ-SLEDLDLSGNP 463

Query: 396 LRSIRRTIL 404
             +  + I+
Sbjct: 464 FTTFPQEIV 472


>gi|260788644|ref|XP_002589359.1| hypothetical protein BRAFLDRAFT_77808 [Branchiostoma floridae]
 gi|229274536|gb|EEN45370.1| hypothetical protein BRAFLDRAFT_77808 [Branchiostoma floridae]
          Length = 862

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 202/421 (47%), Gaps = 23/421 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LDV  N LT +    I     L  L A  N+L  +P+ IGSL +L  L ++ N++  
Sbjct: 38  LEDLDVSDNNLTSIPE-AIGRLQKLYRLDAYSNMLTRLPQAIGSLQKLTHLYIYDNQLTE 96

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +PS +    +L    +GNN LS  P  + KL KL  L ++ NQL E     C L  L VL
Sbjct: 97  MPSGVCSLPNLEVLSVGNNKLSTFPPGVEKLQKLRELYINGNQLTEVPSGVCSLPNLEVL 156

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            +SNN+LS  PP + K+  LR+L + GN L  + S + + P   +L      +  N  S 
Sbjct: 157 GVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLG-----VSNNNLST 211

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        +EL + G  L+ +PS +     +  L +S N +   PP + 
Sbjct: 212 FPPGVEKLQKL--------RELYIYGNQLTEVPSGVCSLPNLEVLSVSNNKLSTFPPGVE 263

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDL 297
               L+ L +  N++ + P  +  SL  L  L + NNP+R++P      K +  L   D 
Sbjct: 264 KLQKLRELYIYDNQLTEVPTGV-CSLPDLEWLSVGNNPIRRLPRQVLQLKTLEKLYAGDC 322

Query: 298 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            +++  +P+     +L HL  L L    L+  P+ +  L  LR + L  N   + PE   
Sbjct: 323 KFDM--VPDE--VGNLQHLWFLALEYNLLKTLPSTMRHLHNLREVRLWSNKFDTFPEVLC 378

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
            L ++ +L + +NNI+ LP  L   +  L+ L + GNPL    + + ++GT A++ +LK 
Sbjct: 379 ELPAMEKLVIRNNNITRLPTALHRAD-KLKDLDVSGNPLTYPPQDVCEQGTGAIMAFLKQ 437

Query: 418 K 418
           +
Sbjct: 438 E 438


>gi|348686389|gb|EGZ26204.1| hypothetical protein PHYSODRAFT_555679 [Phytophthora sojae]
          Length = 785

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 223/500 (44%), Gaps = 110/500 (22%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L VE N+L  L +  I     L  L A  NL+  +P + GSL+ L+ LDL +N +++   
Sbjct: 166 LKVESNQLRTLPST-IGQLRNLKTLSAHSNLIVELPASFGSLTGLLTLDLKKNSLVTTGD 224

Query: 64  SISGCCS-----------------------LAEFYMGNNALSALPAE--LGKLSKLGTLD 98
           +  G  S                       L + ++G N L  +P E  L     L  LD
Sbjct: 225 AFIGLVSIKFIDLRQNKLEVFPMLPENNSSLDQLFLGFNTLREIPEEIVLNVKESLTVLD 284

Query: 99  LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
           +  N+L+    +  QL RL  LD++NN L  LP  +G +  L  LL+ GNPLR++R S++
Sbjct: 285 VRDNKLQRLSGKIPQLYRLKTLDVTNNDLHDLPAGLGYLKYLDHLLVDGNPLRSVRRSII 344

Query: 158 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL---------------------SV 196
           +G T  L KYLR+R    E  +A   + D  T+  R                      + 
Sbjct: 345 SGGTEPLKKYLRTRGGPPEGVDAMEEEVDEFTIRQREIEQDEPMAEEPPAEDEYLFRNAA 404

Query: 197 TSKELSLEGMNLSAIPSEIWEAGE------ITKLDLSRNSIQELPPELSSCASLQTLILS 250
            S  L L  M    +P ++  AG+      + +L+LS+N + ELP  +    SL+TL+  
Sbjct: 405 ASGSLQLVDMKFQQLPVQLGAAGKYRFGETLLQLNLSKNHLVELPVAIGELTSLRTLVAE 464

Query: 251 RNKIK------------------------DWPDAILTSLS------SLSCLKLDNNPLRQ 280
           +  +K                        D  DA+L + +      SL  L L NN L  
Sbjct: 465 QCGLKSIHPSIAMIPSLERLRVGKNSLTTDAIDAMLVAGNNASICLSLKELDLRNNILTD 524

Query: 281 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
           +P    + +  +  L LS+N     +  P+SS                       +QQL 
Sbjct: 525 IPQK-LQYLETMDTLLLSFNRIRALDRFPWSS-----------------------MQQLS 560

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIR 400
           +L +S N L+S+      +  LT L L +N +  +P EL L E +L+AL L GNP R IR
Sbjct: 561 VLSISDNRLESL-GAVHQIPKLTSLSLENNELRQIPAELALCE-NLRALYLAGNPQRGIR 618

Query: 401 RTILDRGTKAVLKYLKDKIP 420
             IL+ GT+AVLKYL++++P
Sbjct: 619 THILNNGTEAVLKYLRNRLP 638



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 158/373 (42%), Gaps = 86/373 (23%)

Query: 48  LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 107
           L +LDL  N I  +P+ +     L  F M +N L  LP  +  L  L +LDL +N+L   
Sbjct: 70  LRKLDLSYNDISELPTQVETLKYLVSFKMRHNRLRHLPLAVWNLETLTSLDLSNNEL--- 126

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 167
             E C                LP ++GK+  LR+L L GN L                  
Sbjct: 127 --EGC----------------LPEQLGKLDKLRELGLEGNKL------------------ 150

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
             ++LPE             I   + L V    L +E   L  +PS I +   +  L   
Sbjct: 151 --TKLPE------------CIGGLSHLEV----LKVESNQLRTLPSTIGQLRNLKTLSAH 192

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            N I ELP    S   L TL L +N +    DA +  L S+  + L  N L   P     
Sbjct: 193 SNLIVELPASFGSLTGLLTLDLKKNSLVTTGDAFI-GLVSIKFIDLRQNKLEVFP----- 246

Query: 288 DIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDIL--RLQQLRILDLS 345
                           LPEN        L +L+L    LRE P +I+    + L +LD+ 
Sbjct: 247 ---------------MLPENN-----SSLDQLFLGFNTLREIPEEIVLNVKESLTVLDVR 286

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
            N LQ +      L  L  LD+++N++  LP  LG L+  L  L +DGNPLRS+RR+I+ 
Sbjct: 287 DNKLQRLSGKIPQLYRLKTLDVTNNDLHDLPAGLGYLK-YLDHLLVDGNPLRSVRRSIIS 345

Query: 406 RGTKAVLKYLKDK 418
            GT+ + KYL+ +
Sbjct: 346 GGTEPLKKYLRTR 358



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 181/432 (41%), Gaps = 60/432 (13%)

Query: 21  SW--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           SW   +L +L  S N ++ +P  + +L  L+   +  NR+  +P ++    +L    + N
Sbjct: 64  SWECAVLRKLDLSYNDISELPTQVETLKYLVSFKMRHNRLRHLPLAVWNLETLTSLDLSN 123

Query: 79  NALSA-LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGK 135
           N L   LP +LGKL KL  L L  N+L +   C+      L VL + +N L  LP  IG+
Sbjct: 124 NELEGCLPEQLGKLDKLRELGLEGNKLTKLPECIGGLS-HLEVLKVESNQLRTLPSTIGQ 182

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS----------EASTTKE 185
           +  L+ L    N +  L +S  +      L   ++ L    D+          +    K 
Sbjct: 183 LRNLKTLSAHSNLIVELPASFGSLTGLLTLDLKKNSLVTTGDAFIGLVSIKFIDLRQNKL 242

Query: 186 DLITMATRLSVTSKELSLEGMNLSAIPSEIW--EAGEITKLDLSRNSIQELPPELSSCAS 243
           ++  M    + +  +L L    L  IP EI       +T LD+  N +Q L  ++     
Sbjct: 243 EVFPMLPENNSSLDQLFLGFNTLREIPEEIVLNVKESLTVLDVRDNKLQRLSGKIPQLYR 302

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV---------------------P 282
           L+TL ++ N + D P A L  L  L  L +D NPLR V                     P
Sbjct: 303 LKTLDVTNNDLHDLP-AGLGYLKYLDHLLVDGNPLRSVRRSIISGGTEPLKKYLRTRGGP 361

Query: 283 SDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR------------MQLREAP 330
            +G  D    ++ + +     + ++ P +  P  ++ YL R            M+ ++ P
Sbjct: 362 PEGV-DAMEEEVDEFTIRQREIEQDEPMAEEPPAEDEYLFRNAAASGSLQLVDMKFQQLP 420

Query: 331 TDILRLQQLRI------LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
             +    + R       L+LS+N L  +P     LTSL  L      + ++ P + ++ P
Sbjct: 421 VQLGAAGKYRFGETLLQLNLSKNHLVELPVAIGELTSLRTLVAEQCGLKSIHPSIAMI-P 479

Query: 385 SLQALRLDGNPL 396
           SL+ LR+  N L
Sbjct: 480 SLERLRVGKNSL 491



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 17/194 (8%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEI-------------WEAGEITKLDLSRNSIQELPPELS 239
           RL+  S  L+L   +  + P E+             WE   + KLDLS N I ELP ++ 
Sbjct: 29  RLARQSGSLNLSSRDFQSFPEEVFRLYELLGEDERSWECAVLRKLDLSYNDISELPTQVE 88

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +   L +  +  N+++  P A+  +L +L+ L L NN L     +    +  L+ L L  
Sbjct: 89  TLKYLVSFKMRHNRLRHLPLAVW-NLETLTSLDLSNNELEGCLPEQLGKLDKLRELGLEG 147

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +  LPE      L HL+ L +   QLR  P+ I +L+ L+ L    N +  +P  F +
Sbjct: 148 NKLTKLPEC--IGGLSHLEVLKVESNQLRTLPSTIGQLRNLKTLSAHSNLIVELPASFGS 205

Query: 359 LTSLTELDLSDNNI 372
           LT L  LDL  N++
Sbjct: 206 LTGLLTLDLKKNSL 219


>gi|421094655|ref|ZP_15555371.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362717|gb|EKP13754.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|456891510|gb|EMG02221.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 422

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 132/370 (35%), Positives = 201/370 (54%), Gaps = 26/370 (7%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L LH N   ++P  I    +L E Y+ +N L  LP E+GKL K+  L L +NQL     +
Sbjct: 47  LSLHNNE--TLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKD 104

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L+ L  LDL+NN L+ LP +IG++  LR+L LT N L+TL   +        L+ LR
Sbjct: 105 IGKLKKLRELDLTNNLLTTLPKDIGQLQNLRELYLTNNQLKTLPKDI------GQLQNLR 158

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
               +N  ++  T  +D+  +        +EL+L+G  L  +P +I +   +T+L+L+ N
Sbjct: 159 ELYLDN--NQLKTLPKDIGQLQNL-----RELNLDGNQLKTLPKDIGKLQNLTELNLTNN 211

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKD 288
            +  LP ++ +  +L  L+L  N++   P  I   L +L  L L    L  +P+D G+  
Sbjct: 212 PLTTLPKDIGNLKNLGELLLINNELTTLPKEI-GKLKNLQVLYL-GALLTTLPNDIGY-- 267

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  L+ L+LS N I +LP++     L +LQ LYL   QL   P +I +LQ LR LDLS N
Sbjct: 268 LKSLRELNLSGNQITTLPKD--IGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGN 325

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
            + ++P+    L SL EL+LS N I+ LP E+G L+ SL+ L L GN + +I + I    
Sbjct: 326 QITTLPKDIGELQSLRELNLSGNQITTLPKEIGKLQ-SLRELNLGGNQITTIPKEIGHLK 384

Query: 408 TKAVLKYLKD 417
              VL YL D
Sbjct: 385 NLQVL-YLDD 393



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 128/379 (33%), Positives = 184/379 (48%), Gaps = 44/379 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     LTEL  S N L  +P+ IG L ++ RL L  N++ ++P  I     L E  + N
Sbjct: 59  IGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTN 118

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP ++G+L  L  L L +NQLK    +  QL+ L  L L NN L  LP +IG++ 
Sbjct: 119 NLLTTLPKDIGQLQNLRELYLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQ 178

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            LR+L L GN L+T                    LP++     + T              
Sbjct: 179 NLRELNLDGNQLKT--------------------LPKDIGKLQNLT-------------- 204

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             EL+L    L+ +P +I     + +L L  N +  LP E+    +LQ L L    +   
Sbjct: 205 --ELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGA-LLTTL 261

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P+ I   L SL  L L  N +  +P D    +  LQ+L LS N +A+LP+      L +L
Sbjct: 262 PNDI-GYLKSLRELNLSGNQITTLPKD-IGQLQNLQVLYLSENQLATLPK--EIGQLQNL 317

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           +EL L   Q+   P DI  LQ LR L+LS N + ++P+    L SL EL+L  N I+ +P
Sbjct: 318 RELDLSGNQITTLPKDIGELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIP 377

Query: 377 PELGLLEPSLQALRLDGNP 395
            E+G L+ +LQ L LD  P
Sbjct: 378 KEIGHLK-NLQVLYLDDIP 395



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 166/367 (45%), Gaps = 69/367 (18%)

Query: 91  LSKLGTL---------DLHSNQLKEY--CVEACQ--LRLSVLDLSNNSLSGLPPEIGKMT 137
           L K+GTL          L + ++  Y    EA Q    + +L L NN    LP EIG++ 
Sbjct: 6   LQKIGTLILILLCFLSQLKAQEIGTYHNLTEALQNPTDVRILSLHNNE--TLPKEIGELQ 63

Query: 138 TLRKLLLTGNPLRTL-----------RSSLVNGPTPAL------LKYLRSRLPENEDSEA 180
            L +L L+ N L+TL           R SL N     L      LK LR         E 
Sbjct: 64  NLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLR---------EL 114

Query: 181 STTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
             T   L T+   +      +EL L    L  +P +I +   + +L L  N ++ LP ++
Sbjct: 115 DLTNNLLTTLPKDIGQLQNLRELYLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDI 174

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-------------- 284
               +L+ L L  N++K  P  I   L +L+ L L NNPL  +P D              
Sbjct: 175 GQLQNLRELNLDGNQLKTLPKDI-GKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLIN 233

Query: 285 --------GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
                       +  LQ+L L   + +LP +  +  L  L+EL L   Q+   P DI +L
Sbjct: 234 NELTTLPKEIGKLKNLQVLYLGALLTTLPNDIGY--LKSLRELNLSGNQITTLPKDIGQL 291

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           Q L++L LS+N L ++P+    L +L ELDLS N I+ LP ++G L+ SL+ L L GN +
Sbjct: 292 QNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQ-SLRELNLSGNQI 350

Query: 397 RSIRRTI 403
            ++ + I
Sbjct: 351 TTLPKEI 357


>gi|354478360|ref|XP_003501383.1| PREDICTED: leucine-rich repeat-containing protein 40 [Cricetulus
           griseus]
 gi|344250474|gb|EGW06578.1| Leucine-rich repeat-containing protein 40 [Cricetulus griseus]
          Length = 602

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 135/409 (33%), Positives = 207/409 (50%), Gaps = 30/409 (7%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+    L  L    NLL  +P  +GS+  L  L L +N++  +P        L E ++G 
Sbjct: 216 ISRMQRLKHLDCDSNLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSSRQLKELHLGE 274

Query: 79  NALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           N +  L AE L +L  +  LDL  N+L+    E   L+ L  LDLSNN +S LP  +G +
Sbjct: 275 NQIETLGAEHLQQLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL 334

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L+ L L GNPLRT+R  ++   T  +LKYLRS++ ++  S+  +  E  +T+ +   V
Sbjct: 335 H-LKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDGTSQNDSVPETAMTLPSESRV 393

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI---LSRNK 253
                     N+ AI +       +  LD S      +P ++   A   T+I    S+N+
Sbjct: 394 ----------NIHAIVT-------LKLLDYSDKQATLIPDDVFDAAKSNTIISVNFSKNQ 436

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 312
           + + P  I+     +S + L  N L  + S  F  +  L  LDL  N + SLPE    SS
Sbjct: 437 LCEIPKRIIELKEMVSDVNLSFNKLSFI-SQEFCLLQKLTFLDLRNNFLNSLPEE--MSS 493

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNN 371
           L  LQ + L   + +  P  +  +  L  + +S N + S+ P+  K + +L+ LDL +N+
Sbjct: 494 LTKLQTINLSFNRFKVLPAVLYHIPTLEAVLISNNQVGSVDPQKVKLMENLSTLDLQNND 553

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           +  +PPELG     L+ L LDGNP R  R  IL +GT AVL+YL+D+IP
Sbjct: 554 LLQVPPELGNC-VQLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 601



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/269 (35%), Positives = 137/269 (50%), Gaps = 53/269 (19%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L +    L+++PS I E   + KL++S N +  LP E++S  +L+ L L  N++   P+ 
Sbjct: 110 LDIHDNQLTSLPSAIRELDNLQKLNVSHNRLNMLPEEITSLKNLKVLHLQHNELTGIPEG 169

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGF----------------KDIPM-------LQILDL 297
               LS L  L L NN L  VP+ GF                K +P        L+ LD 
Sbjct: 170 -FERLSGLEDLDLSNNRLATVPA-GFALLSSLLRLNLSSNQLKSLPAEISRMQRLKHLDC 227

Query: 298 SYNI-ASLPENPPFSSLPHLQELYLRRMQLREAPT-----------------------DI 333
             N+  ++P  P   S+  L+ LYLRR +LR  P                         +
Sbjct: 228 DSNLLETVP--PDVGSMESLELLYLRRNKLRVLPEFPSSRQLKELHLGENQIETLGAEHL 285

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
            +LQ + +LDL  N L+S+PE    L SL  LDLS+N+IS+LP  LG L   L+ L L+G
Sbjct: 286 QQLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNLH--LKFLALEG 343

Query: 394 NPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
           NPLR+IRR I+ +GT+ VLKYL+ KI ++
Sbjct: 344 NPLRTIRREIIAKGTQEVLKYLRSKIKDD 372



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 2/172 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           ++   N+L  +   +I    M++++  S N L+ + +    L +L  LDL  N + S+P 
Sbjct: 430 VNFSKNQLCEIPKRIIELKEMVSDVNLSFNKLSFISQEFCLLQKLTFLDLRNNFLNSLPE 489

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDL 121
            +S    L    +  N    LPA L  +  L  + + +NQ+     +  +L   LS LDL
Sbjct: 490 EMSSLTKLQTINLSFNRFKVLPAVLYHIPTLEAVLISNNQVGSVDPQKVKLMENLSTLDL 549

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            NN L  +PPE+G    LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 550 QNNDLLQVPPELGNCVQLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 601



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 34/184 (18%)

Query: 197 TSKELSLEGMNLSAIPSEIW----EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           +S +L+L G NL  +P  +W    +  E    +LS +S +    +      L  LI+S N
Sbjct: 37  SSGQLNLAGRNLGEVPQCVWRINVDVPEEANQNLSFSSTERWWEQ----TDLTKLIISSN 92

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSS 312
           K++   D  L  L +L+ L + +N L  +PS   +++  LQ L++S+N            
Sbjct: 93  KLQSLSDD-LRLLPALTVLDIHDNQLTSLPS-AIRELDNLQKLNVSHN------------ 138

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
                       +L   P +I  L+ L++L L  N L  IPEGF+ L+ L +LDLS+N +
Sbjct: 139 ------------RLNMLPEEITSLKNLKVLHLQHNELTGIPEGFERLSGLEDLDLSNNRL 186

Query: 373 SALP 376
           + +P
Sbjct: 187 ATVP 190


>gi|255080390|ref|XP_002503775.1| predicted protein [Micromonas sp. RCC299]
 gi|226519042|gb|ACO65033.1| predicted protein [Micromonas sp. RCC299]
          Length = 406

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 176/368 (47%), Gaps = 68/368 (18%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
            L   +P  +G L  L++L L  N++ S+P+ I    SL   ++  N L++LPAE+G+L 
Sbjct: 37  GLTGAVPAEVGQLPSLVKLSLRHNQLTSLPAEIGQLPSLTRLWLAGNQLTSLPAEIGQLM 96

Query: 93  KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
            L  L L+ NQL     E  QL  L  L+L  N L+ +P EIG++T+LR+L L+GN L +
Sbjct: 97  SLEGLFLNGNQLTSVPAEIWQLTSLRALNLYGNQLTSVPEEIGQLTSLRRLFLSGNQLTS 156

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
           +           LL  LR                               L + G   +++
Sbjct: 157 I----------GLLSALRG------------------------------LGVSGNQRTSV 176

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P+EI +   +  L+L  N +  +P E+   ASL+ L L  N++   P  I   L+SL+ L
Sbjct: 177 PAEIGQLTSLEVLELHYNQLTSVPAEIGQLASLKWLNLHGNQLTSLPAGI-GQLTSLTYL 235

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 331
            LD+N L  +P++                            L  L+ LYLR  QL   P 
Sbjct: 236 FLDDNRLTSLPAE-------------------------IGQLTSLERLYLRHNQLTSLPA 270

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           +I +L  L  L L  N L S+P G   LTSLT L L++N +++LP E+G L  SL+AL L
Sbjct: 271 EIGQLASLEWLYLEGNQLTSLPAGIGQLTSLTYLYLNENQLTSLPAEIGQL-TSLKALGL 329

Query: 392 DGNPLRSI 399
           + N L S+
Sbjct: 330 NYNQLTSV 337



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 127/264 (48%), Gaps = 23/264 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L + GN+LT      I   + L  L  S N    +P  IG L+ L  L+LH N++ S
Sbjct: 144 LRRLFLSGNQLTS-----IGLLSALRGLGVSGNQRTSVPAEIGQLTSLEVLELHYNQLTS 198

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I    SL    +  N L++LPA +G+L+ L  L L  N+L     E  QL  L  L
Sbjct: 199 VPAEIGQLASLKWLNLHGNQLTSLPAGIGQLTSLTYLFLDDNRLTSLPAEIGQLTSLERL 258

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--RLPENED 177
            L +N L+ LP EIG++ +L  L L GN L +L         PA +  L S   L  NE+
Sbjct: 259 YLRHNQLTSLPAEIGQLASLEWLYLEGNQLTSL---------PAGIGQLTSLTYLYLNEN 309

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
              S   E  I   T L    K L L    L+++P+EI +   + +L L  N +  +P E
Sbjct: 310 QLTSLPAE--IGQLTSL----KALGLNYNQLTSVPAEIGQLAALRELGLFENQLTSVPAE 363

Query: 238 LSSCASLQTLILSRNKIKDWPDAI 261
           +     L+ L L  N++   P AI
Sbjct: 364 IGQLTLLEGLELRHNRLTSEPAAI 387


>gi|421099992|ref|ZP_15560634.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796973|gb|EKR99090.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 474

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 134/408 (32%), Positives = 205/408 (50%), Gaps = 18/408 (4%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ GN+LT L  + I     L +L    N +  +P+ IG L  L +LDL  N++ ++P 
Sbjct: 53  LDLIGNQLTTLPKD-IGKLQKLQKLDLRGNRIATLPKEIGYLKELQKLDLSNNQLKTLPK 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I         ++  N  + LP E+GKL +L  L+L++NQLK    +  +L+ L VL+L+
Sbjct: 112 DIEQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELYNNQLKTLPKDIERLQNLQVLNLT 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NEDSEAS 181
           NN L  LP +IGK+  L+ L L  N L  L   +       +L    ++L    +D    
Sbjct: 172 NNQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLDLTNNQLTTLPKDIGHL 231

Query: 182 TTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
              +DL     +L+   K+         L L G  L+ +P +I    E+  L L  N   
Sbjct: 232 KELQDLDLSHNKLTALPKDIGKLQNLQVLDLSGNQLTTLPKDIGYLKELQVLHLEDNQFT 291

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            LP E+    +L+ L L  N++   P  I   L +L  L L +N L  +P +    +  L
Sbjct: 292 TLPKEIGQLQNLRVLYLYNNQLTILPKEI-GKLQNLQVLYLHSNQLTTLPKE-IGHLKGL 349

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           Q L LS N + +LP+      L +LQ LYL   QL   P +I +LQ L +L LS N L S
Sbjct: 350 QELYLSNNQLTTLPK--EIGELQNLQVLYLHSNQLTTLPKEIGQLQNLPVLYLSYNQLTS 407

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           +P+    L +L +LDLS+N ++ LP E+G L+ +LQ L L  N L+++
Sbjct: 408 LPKDIGKLQNLQKLDLSNNQLTTLPNEIGKLQ-NLQELYLSNNKLKTL 454



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 122/377 (32%), Positives = 191/377 (50%), Gaps = 24/377 (6%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
            K   + + E + + + ++ LDL  N++ ++P  I     L +  +  N ++ LP E+G 
Sbjct: 33  EKGTYHNLTEALQNPTDVLILDLIGNQLTTLPKDIGKLQKLQKLDLRGNRIATLPKEIGY 92

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLRLS-VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L +L  LDL +NQLK    +  QL+   VL L+ N+ + LP EIGK+  L+ L L  N L
Sbjct: 93  LKELQKLDLSNNQLKTLPKDIEQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELYNNQL 152

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPEN-EDSEASTTKEDLITMATRLSVTSKELSLEGMNL 208
           +TL         P  ++ L++    N  +++  T  +D I     L V    L L    L
Sbjct: 153 KTL---------PKDIERLQNLQVLNLTNNQLKTLPKD-IGKLQNLQV----LRLGNNKL 198

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
           + +  EI +   +  LDL+ N +  LP ++     LQ L LS NK+   P  I   L +L
Sbjct: 199 TILSKEIGKLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNKLTALPKDI-GKLQNL 257

Query: 269 SCLKLDNNPLRQVPSD-GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
             L L  N L  +P D G+  +  LQ+L L  N   +LP+      L +L+ LYL   QL
Sbjct: 258 QVLDLSGNQLTTLPKDIGY--LKELQVLHLEDNQFTTLPK--EIGQLQNLRVLYLYNNQL 313

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
              P +I +LQ L++L L  N L ++P+   +L  L EL LS+N ++ LP E+G L+ +L
Sbjct: 314 TILPKEIGKLQNLQVLYLHSNQLTTLPKEIGHLKGLQELYLSNNQLTTLPKEIGELQ-NL 372

Query: 387 QALRLDGNPLRSIRRTI 403
           Q L L  N L ++ + I
Sbjct: 373 QVLYLHSNQLTTLPKEI 389



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 1/96 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L +  N+LT L    I     L  L  S N L  +P+ IG L  L +LDL  N++ ++P+
Sbjct: 375 LYLHSNQLTTLPKE-IGQLQNLPVLYLSYNQLTSLPKDIGKLQNLQKLDLSNNQLTTLPN 433

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 99
            I    +L E Y+ NN L  LP E+GKL KL TLDL
Sbjct: 434 EIGKLQNLQELYLSNNKLKTLPDEIGKLQKLRTLDL 469


>gi|418744883|ref|ZP_13301228.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794214|gb|EKR92124.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 559

 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 143/450 (31%), Positives = 221/450 (49%), Gaps = 45/450 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+LT   N  I     L  L  + N L  +P+ IG+L +L  L L  N + +
Sbjct: 86  LEELDLFHNRLTTFPNE-IVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLAT 144

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +PS I     L   Y+ NN L  LP E+GKL  L  L L  NQL     E  QL  L  L
Sbjct: 145 LPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQEIGQLENLQDL 204

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL---------LKYLRS 170
           D+SNN L+ LP EIGK+ +L++L L+ N L TL + +  G    L         L+ L  
Sbjct: 205 DVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEI--GKLQNLEELNLSNNQLRTLPQ 262

Query: 171 RLPENEDSEASTTKED-LITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLS 227
            + + ++ E    + + LIT+   +    K   L L+  +L  +P+EI +   + +L L 
Sbjct: 263 EIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLE 322

Query: 228 RNSI----QE-------------------LPPELSSCASLQTLILSRNKIKDWPDAILTS 264
            N +    QE                   LP E+    +LQ L L  N++K  P+ I   
Sbjct: 323 HNQLITLPQEIGTLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNEI-GQ 381

Query: 265 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRR 323
           L +L  L L+NN L+ +P++    +  LQ L+L  N + +LP       L +LQ L L  
Sbjct: 382 LENLQYLNLENNQLKTLPNE-IGQLENLQYLNLENNQLKTLPN--EIGQLENLQYLNLEN 438

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            QL+  P +I +L+ L+ L+L  N L+++P     L +L  L+L +N +  LP E+G L+
Sbjct: 439 NQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGRLENLQYLNLENNQLKTLPNEIGRLQ 498

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
            +L+ L L GN L ++ + I+      +LK
Sbjct: 499 -NLKVLNLGGNQLVTLPQEIVGLKHLQILK 527



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 138/423 (32%), Positives = 199/423 (47%), Gaps = 19/423 (4%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+L  L N  I     L  L  S N L  +P  IG L  L  LDL  NR+ + P+
Sbjct: 43  LDLSDNQLATLPNE-IGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTFPN 101

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I     L   Y+ +N L  LP E+G L KL  L L +N L     E  +L RL  L L 
Sbjct: 102 EIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLYLY 161

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NEDSEA 180
           NN L  LP EIGK+  L +L L  N L TL   +        L    + L    NE  + 
Sbjct: 162 NNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKL 221

Query: 181 STTKE------DLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
            + K        LIT+   +      +EL+L    L  +P EI +  E+  L L  N + 
Sbjct: 222 RSLKRLNLSNNLLITLPNEIGKLQNLEELNLSNNQLRTLPQEIGQLQELEWLHLEHNQLI 281

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            LP E+ +   L+ L L  N ++  P+ I   L SL  L L++N L  +P +      + 
Sbjct: 282 TLPQEIGTLQKLEYLYLKNNHLETLPNEI-GKLRSLKRLHLEHNQLITLPQEIGTLQNLP 340

Query: 293 QILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            +   +  +A+LP       L +LQ L L   QL+  P +I +L+ L+ L+L  N L+++
Sbjct: 341 NLNLSNNQLATLPN--EIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTL 398

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVL 412
           P     L +L  L+L +N +  LP E+G LE +LQ L L+ N L+++   I   G    L
Sbjct: 399 PNEIGQLENLQYLNLENNQLKTLPNEIGQLE-NLQYLNLENNQLKTLPNEI---GQLENL 454

Query: 413 KYL 415
           +YL
Sbjct: 455 QYL 457



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 188/390 (48%), Gaps = 25/390 (6%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L    N L  +P+ IG L  L  LD+  N + ++P+ I    SL    + N
Sbjct: 172 IGKLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSN 231

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP E+GKL  L  L+L +NQL+    E  QL+ L  L L +N L  LP EIG + 
Sbjct: 232 NLLITLPNEIGKLQNLEELNLSNNQLRTLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQ 291

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV- 196
            L  L L  N L TL         P  +  LRS                LIT+   +   
Sbjct: 292 KLEYLYLKNNHLETL---------PNEIGKLRSL------KRLHLEHNQLITLPQEIGTL 336

Query: 197 -TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
                L+L    L+ +P+EI +   +  L+L  N ++ LP E+    +LQ L L  N++K
Sbjct: 337 QNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLK 396

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             P+ I   L +L  L L+NN L+ +P++    +  LQ L+L  N + +LP       L 
Sbjct: 397 TLPNEI-GQLENLQYLNLENNQLKTLPNE-IGQLENLQYLNLENNQLKTLPN--EIGQLE 452

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           +LQ L L   QL+  P +I RL+ L+ L+L  N L+++P     L +L  L+L  N +  
Sbjct: 453 NLQYLNLENNQLKTLPNEIGRLENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLVT 512

Query: 375 LPPELGLLEPSLQALRLDGNP-LRSIRRTI 403
           LP E+  L+  LQ L+L   P L S + TI
Sbjct: 513 LPQEIVGLK-HLQILKLKNIPALLSEKETI 541



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 154/349 (44%), Gaps = 66/349 (18%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  N L  L N  I     L EL  S N L  +P+ IG L  L  L L  N++++
Sbjct: 224 LKRLNLSNNLLITLPNE-IGKLQNLEELNLSNNQLRTLPQEIGQLQELEWLHLEHNQLIT 282

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL----KEYCV------- 109
           +P  I     L   Y+ NN L  LP E+GKL  L  L L  NQL    +E          
Sbjct: 283 LPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPNL 342

Query: 110 ------------EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
                       E  QL  L  L+L NN L  LP EIG++  L+ L L  N L+TL + +
Sbjct: 343 NLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEI 402

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
             G    L                                  + L+LE   L  +P+EI 
Sbjct: 403 --GQLENL----------------------------------QYLNLENNQLKTLPNEIG 426

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           +   +  L+L  N ++ LP E+    +LQ L L  N++K  P+ I   L +L  L L+NN
Sbjct: 427 QLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEI-GRLENLQYLNLENN 485

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 324
            L+ +P++    +  L++L+L  N + +LP+      L HLQ L L+ +
Sbjct: 486 QLKTLPNE-IGRLQNLKVLNLGGNQLVTLPQ--EIVGLKHLQILKLKNI 531


>gi|410451706|ref|ZP_11305708.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014472|gb|EKO76602.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 515

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 185/370 (50%), Gaps = 24/370 (6%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ IG L  L  LDL  N+++++P  I     L +  +  N L+ LP E+GKL  L  L
Sbjct: 127 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQEL 186

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL  NQL     E   L+ L  LDL  N L+ LP EIGK+  L+KL L  N L T    +
Sbjct: 187 DLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTFPKEI 246

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSE 214
            +     +L               S     L T+   +      +E+      L+ +P E
Sbjct: 247 EDLQNLKIL---------------SLGNNQLTTLPKEVGKLQNLQEMKSSKNQLTTLPKE 291

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           I     + +L L+ N +  LP E+ +  +LQ L L  N++   P  I  +L +L  L L 
Sbjct: 292 IGNLQNLQELYLAHNQLTALPKEIGNLQNLQQLYLYGNQLTTLPIEI-GNLQNLQGLHLG 350

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
           NN L   P +   ++  L+ L L+ N + ++P+     +L +L+EL L   QL   P +I
Sbjct: 351 NNKLTAFPKE-IGNLQKLKWLGLNKNQLTTIPK--EIGNLQNLKELNLSSNQLTTIPKEI 407

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
             LQ L++LDL+ N L ++P+   NL +L ELDL+ N ++ LP E+G L+ SL++L L  
Sbjct: 408 ENLQNLQVLDLNNNQLTALPKEIGNLQNLKELDLTSNRLTTLPKEIGNLQ-SLESLDLSN 466

Query: 394 NPLRSIRRTI 403
           NPL S    I
Sbjct: 467 NPLTSFPEEI 476



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 159/379 (41%), Gaps = 89/379 (23%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+EGN+LT L                        P+ IG L  L +L L+ NR+ +
Sbjct: 206 LQTLDLEGNQLTTL------------------------PKEIGKLQNLKKLYLYNNRLTT 241

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
            P  I    +L    +GNN L+ LP E+GKL  L  +    NQL     E   L+ L  L
Sbjct: 242 FPKEIEDLQNLKILSLGNNQLTTLPKEVGKLQNLQEMKSSKNQLTTLPKEIGNLQNLQEL 301

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++N L+ LP EIG +  L++L L GN L TL   + N      L+ L+          
Sbjct: 302 YLAHNQLTALPKEIGNLQNLQQLYLYGNQLTTLPIEIGN------LQNLQG--------- 346

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                L L    L+A P EI    ++  L L++N +  +P E+ 
Sbjct: 347 ---------------------LHLGNNKLTAFPKEIGNLQKLKWLGLNKNQLTTIPKEIG 385

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  +L+ L LS N++   P  I  +L +L  L L+NN L  +P +               
Sbjct: 386 NLQNLKELNLSSNQLTTIPKEI-ENLQNLQVLDLNNNQLTALPKE--------------- 429

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                       +L +L+EL L   +L   P +I  LQ L  LDLS N L S PE    L
Sbjct: 430 ----------IGNLQNLKELDLTSNRLTTLPKEIGNLQSLESLDLSNNPLTSFPEEIGKL 479

Query: 360 TSLTELDLSDNNISALPPE 378
             L  L L   NI  L P+
Sbjct: 480 QHLKRLRLE--NIPTLLPQ 496



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 6/197 (3%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L  +P EI +   +  LDLS N +  LP E+     LQ L L+RN++ + P+ I   L +
Sbjct: 124 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEI-GKLQN 182

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L L+ N L  +P +   ++  LQ LDL  N + +LP+      L +L++LYL   +L
Sbjct: 183 LQELDLEGNQLATLPEE-IGNLQNLQTLDLEGNQLTTLPK--EIGKLQNLKKLYLYNNRL 239

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
              P +I  LQ L+IL L  N L ++P+    L +L E+  S N ++ LP E+G L+ +L
Sbjct: 240 TTFPKEIEDLQNLKILSLGNNQLTTLPKEVGKLQNLQEMKSSKNQLTTLPKEIGNLQ-NL 298

Query: 387 QALRLDGNPLRSIRRTI 403
           Q L L  N L ++ + I
Sbjct: 299 QELYLAHNQLTALPKEI 315


>gi|421130081|ref|ZP_15590279.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410358680|gb|EKP05831.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 515

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 134/405 (33%), Positives = 199/405 (49%), Gaps = 21/405 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL++  N+ T+L    +     L EL    N L  +P  IG L  L  L+L  N+  +
Sbjct: 94  LRKLNLYDNQFTILPKE-VEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKT 152

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           IP  I    +L   Y+GNN L+ALP E+G++  L  L L SN+L     E  QL+ L  L
Sbjct: 153 IPKEIGQLKNLQTLYLGNNQLTALPNEIGQIQNLQFLYLGSNRLTILPKEIGQLKNLRKL 212

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDS 178
           +L +N  + LP E+ K+  L++L L  N L TL + +        LK LR   L  N+  
Sbjct: 213 NLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEI------GQLKNLRVLELTHNQFK 266

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
             S     L  + T        L+L    L+A+P+EI +   +  L L  N +  LP E+
Sbjct: 267 TISKEIGQLKNLQT--------LNLGYNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEI 318

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
               +LQ+L L  N++   P+ I   L  L  L L  N L  +P++    +  LQ L L 
Sbjct: 319 GQLQNLQSLYLGNNQLTALPNEI-GQLQKLQELYLSTNRLTTLPNE-IGQLQNLQELYLG 376

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
            N  ++  N     L +LQ LYLR  +L     DI +LQ L+ LDL  N L + P+  + 
Sbjct: 377 SNQLTILPNE-IGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQ 435

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L +L  LDL  N ++ LP E+G L+ +LQ   L+ N L ++ + I
Sbjct: 436 LKNLQVLDLGSNQLTTLPKEIGQLK-NLQVFELNNNQLTTLPKEI 479



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 148/289 (51%), Gaps = 23/289 (7%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RL 172
           L + VL+LS N    LP EIGK+  L++L L  N L  L   +        LK LR   L
Sbjct: 46  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEI------GQLKNLRKLNL 99

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
            +N+ +      E L  +        KEL L    L+ +P+EI +   +  L+L+ N  +
Sbjct: 100 YDNQFTILPKEVEKLENL--------KELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFK 151

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIP 290
            +P E+    +LQTL L  N++   P+ I   + +L  L L +N L  +P +    K++ 
Sbjct: 152 TIPKEIGQLKNLQTLYLGNNQLTALPNEI-GQIQNLQFLYLGSNRLTILPKEIGQLKNLR 210

Query: 291 MLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
            L + D  + I  LP+      L +L+ELYL   +L   P +I +L+ LR+L+L+ N  +
Sbjct: 211 KLNLYDNQFTI--LPK--EVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFK 266

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           +I +    L +L  L+L  N ++ALP E+G L+ +LQ+L L  N L ++
Sbjct: 267 TISKEIGQLKNLQTLNLGYNQLTALPNEIGQLQ-NLQSLYLGNNQLTAL 314



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 115/224 (51%), Gaps = 7/224 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E   T  DL T A +  +  + L+L       +P EI +   + +L+L++N +  LP 
Sbjct: 28  QAEEPGTYRDL-TKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPK 86

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    +L+ L L  N+    P  +   L +L  L L +N L  +P++    +  L++L+
Sbjct: 87  EIGQLKNLRKLNLYDNQFTILPKEV-EKLENLKELYLGSNRLTTLPNE-IGQLKNLRVLE 144

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L++N   ++P+      L +LQ LYL   QL   P +I ++Q L+ L L  N L  +P+ 
Sbjct: 145 LTHNQFKTIPK--EIGQLKNLQTLYLGNNQLTALPNEIGQIQNLQFLYLGSNRLTILPKE 202

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
              L +L +L+L DN  + LP E+  LE +L+ L L  N L ++
Sbjct: 203 IGQLKNLRKLNLYDNQFTILPKEVEKLE-NLKELYLGSNRLTTL 245



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 23/149 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+LT+L N  I     L  L    N L  + + I  L  L  LDL  N++ +
Sbjct: 370 LQELYLGSNQLTILPNE-IGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTT 428

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
            P  I    +L    +G+N L+ LP E+G+L                        L V +
Sbjct: 429 FPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLK----------------------NLQVFE 466

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L+NN L+ LP EIG++  L++L L  N L
Sbjct: 467 LNNNQLTTLPKEIGQLQNLQELYLIDNQL 495


>gi|418701699|ref|ZP_13262621.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759263|gb|EKR25478.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 498

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 135/405 (33%), Positives = 199/405 (49%), Gaps = 44/405 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N LT+L    I     L EL  S N L  +P+ +G L  L RL+L+  ++ +
Sbjct: 73  LQRLDLSFNSLTILPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTT 131

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  +  N+L+ LP E+G+L  L  LDLH N+L    +E  QL+ L  L
Sbjct: 132 LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQEL 191

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL++N L+ LP EI ++  L++L L  N L TL         P  +  L++         
Sbjct: 192 DLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL---------PKEIGQLQN--------- 233

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              K L+L    L+ +P EI E   +  L+L  N +  LP E+ 
Sbjct: 234 ------------------LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIG 275

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+ L+L  N+I   P  I   L +L  L L  N L  +P +    +  LQ LDL  
Sbjct: 276 ELQNLEILVLRENRITALPKEI-GQLQNLQWLDLHQNQLTTLPKE-IGQLQNLQRLDLHQ 333

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N + +LP+      L +LQEL L   QL   P +I +LQ LR+LDL  N L ++P+    
Sbjct: 334 NQLTTLPK--EIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLR 391

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L SL  L L  N +S LP E+G L+ +LQ L L  N L ++ + I
Sbjct: 392 LQSLQVLALGSNRLSTLPKEIGQLQ-NLQVLGLISNQLTTLPKEI 435



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 128/385 (33%), Positives = 186/385 (48%), Gaps = 38/385 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++   KLT L    I     L EL  S N L  +P+ +G L  L RLDLHQNR+ +
Sbjct: 119 LQRLNLNSQKLTTLPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLAT 177

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  + +N L+ LP E+ +L  L  LDLH NQL     E  QL+ L  L
Sbjct: 178 LPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTL 237

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L    L+ LP EIG++  L+ L L  N L TL   +  G    L               
Sbjct: 238 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI--GELQNL--------------- 280

Query: 180 ASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
                E L+    R++   KE         L L    L+ +P EI +   + +LDL +N 
Sbjct: 281 -----EILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQ 335

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           +  LP E+    +LQ L L  N++   P  I   L +L  L LDNN L  +P +  + + 
Sbjct: 336 LTTLPKEIGQLQNLQELCLDENQLTTLPKEI-EQLQNLRVLDLDNNQLTTLPKEVLR-LQ 393

Query: 291 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
            LQ+L L  N +++LP+      L +LQ L L   QL   P +I +LQ L+ L L +N L
Sbjct: 394 SLQVLALGSNRLSTLPK--EIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQL 451

Query: 350 QSIPEGFKNLTSLTELDLSDNNISA 374
            + P+  + L +L EL L  N +S+
Sbjct: 452 TTFPKEIRQLKNLQELHLYLNPLSS 476



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 185/364 (50%), Gaps = 20/364 (5%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL   ++  +P  I    +L    +  N+L+ LP E+G+L  L  LDL  N L     E
Sbjct: 53  LDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL  L  L+L++  L+ LP EIG++  L++L L+ N L TL   +  G    L     
Sbjct: 113 VGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEV--GQLENL----- 165

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
            RL  +++  A+   E  I     L    +EL L    L+ +P EI +   + +LDL RN
Sbjct: 166 QRLDLHQNRLATLPME--IGQLKNL----QELDLNSNKLTTLPKEIRQLRNLQELDLHRN 219

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP E+    +L+TL L   ++   P  I   L +L  L L +N L  +P +   ++
Sbjct: 220 QLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEI-GELQNLKTLNLLDNQLTTLPKE-IGEL 277

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L+IL L  N I +LP+      L +LQ L L + QL   P +I +LQ L+ LDL QN 
Sbjct: 278 QNLEILVLRENRITALPK--EIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQ 335

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGT 408
           L ++P+    L +L EL L +N ++ LP E+  L+ +L+ L LD N L ++ + +L   +
Sbjct: 336 LTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQ-NLRVLDLDNNQLTTLPKEVLRLQS 394

Query: 409 KAVL 412
             VL
Sbjct: 395 LQVL 398



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 147/293 (50%), Gaps = 23/293 (7%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L++  LDL    L+ LP EIG++  L++L L+ N L  L         P  +  LR+   
Sbjct: 48  LKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTIL---------PKEIGQLRNL-- 96

Query: 174 ENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 231
                E   +   L T+   +      + L+L    L+ +P EI +   + +LDLS NS+
Sbjct: 97  ----QELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSL 152

Query: 232 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 291
             LP E+    +LQ L L +N++   P  I   L +L  L L++N L  +P +  + +  
Sbjct: 153 TTLPKEVGQLENLQRLDLHQNRLATLPMEI-GQLKNLQELDLNSNKLTTLPKE-IRQLRN 210

Query: 292 LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
           LQ LDL  N + +LP+      L +L+ L L   QL   P +I  LQ L+ L+L  N L 
Sbjct: 211 LQELDLHRNQLTTLPK--EIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLT 268

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           ++P+    L +L  L L +N I+ALP E+G L+ +LQ L L  N L ++ + I
Sbjct: 269 TLPKEIGELQNLEILVLRENRITALPKEIGQLQ-NLQWLDLHQNQLTTLPKEI 320



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 7/209 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+SE+ T  +  +  A +  +  + L L    L+ +P EI +   + +LDLS NS+  LP
Sbjct: 30  EESESGTYTD--LAKALQNPLKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L LS N +   P  +   L +L  L L++  L  +P +    +  LQ L
Sbjct: 88  KEIGQLRNLQELDLSFNSLTTLPKEV-GQLENLQRLNLNSQKLTTLPKE-IGQLRNLQEL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           DLS+N + +LP+      L +LQ L L + +L   P +I +L+ L+ LDL+ N L ++P+
Sbjct: 146 DLSFNSLTTLPK--EVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLE 383
             + L +L ELDL  N ++ LP E+G L+
Sbjct: 204 EIRQLRNLQELDLHRNQLTTLPKEIGQLQ 232


>gi|455791564|gb|EMF43371.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 452

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 140/414 (33%), Positives = 201/414 (48%), Gaps = 44/414 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+   KLT+L    I     L EL  S N L  +P+ +G L  L RLDLHQNR+ ++P 
Sbjct: 53  LDLRYQKLTILPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPM 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  + +N L+ LP E+ +L  L  LDLH NQL     E  QL+ L  L+L 
Sbjct: 112 EIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLI 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
              L+ LP EIG++  L+ L L  N L TL   +  G    L                  
Sbjct: 172 VTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI--GELQNL------------------ 211

Query: 183 TKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
             E L+    R++   KE         L L    L+ +P EI +   + +LDL +N +  
Sbjct: 212 --EILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTT 269

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQ L L +N++   P  I   L +L  L LD N L  +P +  + +  L+
Sbjct: 270 LPKEIGQLQNLQRLDLHQNQLTTLPKEI-GQLQNLQELCLDENQLTTLPKE-IEQLQNLR 327

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
           +LDL  N + +LP+      L  LQ L L   +L   P +I +LQ L++L L  N L ++
Sbjct: 328 VLDLDNNQLTTLPKE--VLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTL 385

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS-----IRR 401
           P+    L +L EL L +N ++  P E+  L+ +LQ L L  NPL S     IRR
Sbjct: 386 PKEIGQLQNLQELCLDENQLTTFPKEIRQLK-NLQELHLYLNPLSSKEKKRIRR 438



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 149/291 (51%), Gaps = 19/291 (6%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L++  LDL    L+ LP EIG++  L++L L+ N L TL   +  G    L      RL 
Sbjct: 48  LKVRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEV--GQLENL-----QRLD 100

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
            +++  A+      + M        +EL L    L+ +P EI +   + +LDL RN +  
Sbjct: 101 LHQNRLAT------LPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTT 154

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +L+TL L   ++   P  I   L +L  L L +N L  +P +   ++  L+
Sbjct: 155 LPKEIGQLQNLKTLNLIVTQLTTLPKEI-GELQNLKTLNLLDNQLTTLPKE-IGELQNLE 212

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
           IL L  N I +LP+      L +LQ L L + QL   P +I +LQ L+ LDL QN L ++
Sbjct: 213 ILVLRENRITALPKE--IGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTL 270

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P+    L +L  LDL  N ++ LP E+G L+ +LQ L LD N L ++ + I
Sbjct: 271 PKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ-NLQELCLDENQLTTLPKEI 320



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 122/229 (53%), Gaps = 8/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+SE+ T  +  +  A +  +  + L L    L+ +P EI +   + +LDLS NS+  LP
Sbjct: 30  EESESGTYTD--LAKALQNPLKVRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L L +N++   P  I   L +L  L L++N L  +P +  + +  LQ L
Sbjct: 88  KEVGQLENLQRLDLHQNRLATLPMEI-GQLKNLQELDLNSNKLTTLPKE-IRQLRNLQEL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           DL  N + +LP+      L +L+ L L   QL   P +I  LQ L+ L+L  N L ++P+
Sbjct: 146 DLHRNQLTTLPKE--IGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L  L L +N I+ALP E+G L+ +LQ L L  N L ++ + I
Sbjct: 204 EIGELQNLEILVLRENRITALPKEIGQLQ-NLQWLDLHQNQLTTLPKEI 251


>gi|421118971|ref|ZP_15579298.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348311|gb|EKO99137.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 498

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 135/405 (33%), Positives = 199/405 (49%), Gaps = 44/405 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N LT+L    I     L EL  S N L  +P+ +G L  L RL+L+  ++ +
Sbjct: 73  LQRLDLSFNSLTILPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTT 131

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  +  N+L+ LP E+G+L  L  LDLH N+L    +E  QL+ L  L
Sbjct: 132 LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQEL 191

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL++N L+ LP EI ++  L++L L  N L TL         P  +  L++         
Sbjct: 192 DLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL---------PKEIGQLQN--------- 233

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              K L+L    L+ +P EI E   +  L+L  N +  LP E+ 
Sbjct: 234 ------------------LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIG 275

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+ L+L  N+I   P  I   L +L  L L  N L  +P +    +  LQ LDL  
Sbjct: 276 ELQNLEILVLRENRITALPKEI-GQLQNLQWLDLHQNQLTILPKE-IGQLQNLQRLDLHQ 333

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N + +LP+      L +LQEL L   QL   P +I +LQ LR+LDL  N L ++P+    
Sbjct: 334 NQLTTLPK--EIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLR 391

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L SL  L L  N +S LP E+G L+ +LQ L L  N L ++ + I
Sbjct: 392 LQSLQVLALGSNRLSTLPKEIGQLQ-NLQVLALISNQLTTLPKEI 435



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 128/385 (33%), Positives = 186/385 (48%), Gaps = 38/385 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++   KLT L    I     L EL  S N L  +P+ +G L  L RLDLHQNR+ +
Sbjct: 119 LQRLNLNSQKLTTLPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLAT 177

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  + +N L+ LP E+ +L  L  LDLH NQL     E  QL+ L  L
Sbjct: 178 LPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTL 237

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L    L+ LP EIG++  L+ L L  N L TL   +  G    L               
Sbjct: 238 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI--GELQNL--------------- 280

Query: 180 ASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
                E L+    R++   KE         L L    L+ +P EI +   + +LDL +N 
Sbjct: 281 -----EILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQ 335

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           +  LP E+    +LQ L L  N++   P  I   L +L  L LDNN L  +P +  + + 
Sbjct: 336 LTTLPKEIGQLQNLQELCLDENQLTTLPKEI-EQLQNLRVLDLDNNQLTTLPKEVLR-LQ 393

Query: 291 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
            LQ+L L  N +++LP+      L +LQ L L   QL   P +I +LQ L+ L L +N L
Sbjct: 394 SLQVLALGSNRLSTLPK--EIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQL 451

Query: 350 QSIPEGFKNLTSLTELDLSDNNISA 374
            + P+  + L +L EL L  N +S+
Sbjct: 452 TTFPKEIRQLKNLQELHLYLNPLSS 476



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 185/364 (50%), Gaps = 20/364 (5%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL   ++  +P  I    +L    +  N+L+ LP E+G+L  L  LDL  N L     E
Sbjct: 53  LDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL  L  L+L++  L+ LP EIG++  L++L L+ N L TL   +  G    L     
Sbjct: 113 VGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEV--GQLENL----- 165

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
            RL  +++  A+   E  I     L    +EL L    L+ +P EI +   + +LDL RN
Sbjct: 166 QRLDLHQNRLATLPME--IGQLKNL----QELDLNSNKLTTLPKEIRQLRNLQELDLHRN 219

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP E+    +L+TL L   ++   P  I   L +L  L L +N L  +P +   ++
Sbjct: 220 QLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEI-GELQNLKTLNLLDNQLTTLPKE-IGEL 277

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L+IL L  N I +LP+      L +LQ L L + QL   P +I +LQ L+ LDL QN 
Sbjct: 278 QNLEILVLRENRITALPK--EIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQ 335

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGT 408
           L ++P+    L +L EL L +N ++ LP E+  L+ +L+ L LD N L ++ + +L   +
Sbjct: 336 LTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQ-NLRVLDLDNNQLTTLPKEVLRLQS 394

Query: 409 KAVL 412
             VL
Sbjct: 395 LQVL 398



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 114/209 (54%), Gaps = 7/209 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+SE+ T  +   T+   L V +  L L    L+ +P EI +   + +LDLS NS+  LP
Sbjct: 30  EESESGTYTDLAKTLQNPLKVRT--LDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L LS N +   P  +   L +L  L L++  L  +P +    +  LQ L
Sbjct: 88  KEIGQLRNLQELDLSFNSLTTLPKEV-GQLENLQRLNLNSQKLTTLPKE-IGQLRNLQEL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           DLS+N + +LP+      L +LQ L L + +L   P +I +L+ L+ LDL+ N L ++P+
Sbjct: 146 DLSFNSLTTLPK--EVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLE 383
             + L +L ELDL  N ++ LP E+G L+
Sbjct: 204 EIRQLRNLQELDLHRNQLTTLPKEIGQLQ 232


>gi|197632025|gb|ACH70736.1| leucine rich repeat containing 40 [Salmo salar]
          Length = 600

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 139/454 (30%), Positives = 217/454 (47%), Gaps = 63/454 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  +D+  N+LT + ++L  +   L +L  S N L  +P  I  +  L  LD   N++ S
Sbjct: 175 LDDIDLSNNQLTAVPDSL-GNLNHLVKLNLSHNKLKSLPSGISVMKNLRLLDCTHNQLES 233

Query: 61  IPSSISGCCSLAEFYM---------------------GNNALSALPAE-LGKLSKLGTLD 98
           IP  +S   SL + Y+                     GNN +  L AE L  LS L  L+
Sbjct: 234 IPPVLSQMASLEQLYLRHNKLRFLPELPSSRLKELHVGNNQIEVLEAEHLKHLSTLSVLE 293

Query: 99  LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
           L  N++K    E   L+ L  LDL NN +S LP  +  +  L+ L L GNPLR +R  L+
Sbjct: 294 LRDNKVKTLPEEIELLQGLERLDLVNNDISSLPAALALLPKLKILTLEGNPLRGIRRDLL 353

Query: 158 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV------TSKELSLEGMNLSAI 211
              T  LLKYLR R+ E+ D +     +  +T+ ++  +      T K L      ++ +
Sbjct: 354 TKGTNELLKYLRGRIKEDPDGKGDEP-DTAMTLPSQAKINVHTIKTLKILDYSEKQMACV 412

Query: 212 PSEIWEA---GEITKLDLSRNSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLSS 267
           P ++++A     +  ++ S+N +  +PP L     S+  + L  NK+   P      L  
Sbjct: 413 PDDVFDAVGSEPVASVNFSKNQLAAVPPRLVELKDSVSDINLGFNKLTSLP-LEFCMLQQ 471

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L+ + L NN L  +P +  + +  L+ + LS+N                      R +L 
Sbjct: 472 LAHIDLRNNLLTSLPME-IEALMKLRSITLSFN----------------------RFKL- 507

Query: 328 EAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
             P  + R+  L  + +S N + +I P   K L  L+ LDL +N+I  +PPELG    SL
Sbjct: 508 -FPEVLYRVPSLETILISNNQVGAINPLQLKALDKLSTLDLQNNDIMQVPPELGNCT-SL 565

Query: 387 QALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           +AL LDGNP R+ R  I+ RGT AVL+YL+ +IP
Sbjct: 566 RALMLDGNPFRNPRAAIVSRGTDAVLEYLRSRIP 599



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 187/378 (49%), Gaps = 43/378 (11%)

Query: 70  SLAEFYMGNNALSALPAELGKLS-KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS- 127
           S A F       +A+P  L K + K G L+L    L E      +L L   + +  +LS 
Sbjct: 12  SRAGFRTEKEEPAAVPYGLLKTARKSGQLNLSGRGLTEVPQSVWRLNLDTPEEAKQNLSF 71

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
           G        T L KLLL  N L  L   +   P   +L      + +N+ +   T+  +L
Sbjct: 72  GADDRWWDQTDLTKLLLPSNKLEALSEDVKLLPALTVLD-----VHDNQLTSLPTSIGEL 126

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
             +        ++LSL    L  +P E+W    +T L L +N ++ LP  +    +L  +
Sbjct: 127 QHL--------QKLSLSHNKLKELPKEVWSLKNLTCLQLQQNLLEHLPEGVGLLTNLDDI 178

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            LS N++   PD+ L +L+ L  L L +N L+ +PS G   +  L++LD ++N + S+P 
Sbjct: 179 DLSNNQLTAVPDS-LGNLNHLVKLNLSHNKLKSLPS-GISVMKNLRLLDCTHNQLESIP- 235

Query: 307 NPPFSSLPHLQELYLRRMQLREAP----------------TDILRLQQLR------ILDL 344
            P  S +  L++LYLR  +LR  P                 ++L  + L+      +L+L
Sbjct: 236 -PVLSQMASLEQLYLRHNKLRFLPELPSSRLKELHVGNNQIEVLEAEHLKHLSTLSVLEL 294

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
             N ++++PE  + L  L  LDL +N+IS+LP  L LL P L+ L L+GNPLR IRR +L
Sbjct: 295 RDNKVKTLPEEIELLQGLERLDLVNNDISSLPAALALL-PKLKILTLEGNPLRGIRRDLL 353

Query: 405 DRGTKAVLKYLKDKIPEN 422
            +GT  +LKYL+ +I E+
Sbjct: 354 TKGTNELLKYLRGRIKED 371



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 178/395 (45%), Gaps = 31/395 (7%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T LT+L+   N L  + E +  L  L  LD+H N++ S+P+SI     L +  + +N L 
Sbjct: 81  TDLTKLLLPSNKLEALSEDVKLLPALTVLDVHDNQLTSLPTSIGELQHLQKLSLSHNKLK 140

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLR 140
            LP E+  L  L  L L  N L E+  E   L   L  +DLSNN L+ +P  +G +  L 
Sbjct: 141 ELPKEVWSLKNLTCLQLQQNLL-EHLPEGVGLLTNLDDIDLSNNQLTAVPDSLGNLNHLV 199

Query: 141 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL---PENEDSEASTTKEDLITMATRL--- 194
           KL L+ N L++L S +       LL    ++L   P      AS  +  L     R    
Sbjct: 200 KLNLSHNKLKSLPSGISVMKNLRLLDCTHNQLESIPPVLSQMASLEQLYLRHNKLRFLPE 259

Query: 195 --SVTSKELSLEGMNLSAIPSE-IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 251
             S   KEL +    +  + +E +     ++ L+L  N ++ LP E+     L+ L L  
Sbjct: 260 LPSSRLKELHVGNNQIEVLEAEHLKHLSTLSVLELRDNKVKTLPEEIELLQGLERLDLVN 319

Query: 252 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD----GFKDIPMLQILDLSYNIASLPEN 307
           N I   P A L  L  L  L L+ NPLR +  D    G  ++       L Y    + E+
Sbjct: 320 NDISSLP-AALALLPKLKILTLEGNPLRGIRRDLLTKGTNEL-------LKYLRGRIKED 371

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG-FKNLTS--LTE 364
           P          + L      +A  ++  ++ L+ILD S+  +  +P+  F  + S  +  
Sbjct: 372 PDGKGDEPDTAMTLP----SQAKINVHTIKTLKILDYSEKQMACVPDDVFDAVGSEPVAS 427

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           ++ S N ++A+PP L  L+ S+  + L  N L S+
Sbjct: 428 VNFSKNQLAAVPPRLVELKDSVSDINLGFNKLTSL 462


>gi|428170126|gb|EKX39054.1| hypothetical protein GUITHDRAFT_96825 [Guillardia theta CCMP2712]
          Length = 663

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/411 (30%), Positives = 195/411 (47%), Gaps = 57/411 (13%)

Query: 14  LSNNLIASW-------TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 66
           ++NN +  W       T +TEL  ++N +  +P    +L  L  L++  NRI  +P  + 
Sbjct: 120 INNNQLDIWPPCLQYLTSITELFMNRNTIEFVPPECSTLVNLRHLEVSGNRIYDLPPQVG 179

Query: 67  GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNS 125
           G  SL    M +N L ALP  LG+LSK+ +L   +N +  + +E      L  LDLS N 
Sbjct: 180 GWTSLTTLKMDSNRLPALPETLGQLSKVESLSFANNNIITFPMEVGSWHNLRTLDLSKND 239

Query: 126 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 185
           +  LP  I   T +R+L L GNPL  L         P  +  +R                
Sbjct: 240 IRFLPSSISNSTAMRQLFLEGNPLIQL---------PLGMGSMRG--------------- 275

Query: 186 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 245
            L  +++  +V S+ L L G  +S +P E+ E   +T+L +  N+++ +  E+     L+
Sbjct: 276 -LRKLSSSQAVLSRRLDLSGFTISVLPKEVIELTSLTELTMRDNNLKVVVSEIEQLPQLE 334

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 305
            + LS N+IK  P A L  LS L  L +  N L+ +P                   A +P
Sbjct: 335 LVDLSSNRIKMLP-ATLGKLSRLRRLDVRRNRLKHLP-------------------AMIP 374

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
               F +L  L++L L   +++E P +I RL  L  L L+ N +  +PE    ++SL  L
Sbjct: 375 REISFCTL--LKDLQLDGNRIQELPIEITRLSSLARLKLNDNCVSVVPEWIGRMSSLRHL 432

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
            L +N +  +P  + LL  +L  L LDGNPL SI   +L  G K +L++L+
Sbjct: 433 SLGNNRLQHVPYSISLL--NLAVLTLDGNPLDSIETGVLMGGAKGLLEHLR 481



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 176/399 (44%), Gaps = 74/399 (18%)

Query: 70  SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC-----------VEACQLRLSV 118
           SL + ++ +N L A P ELG L+ L  L L  N   E C           ++  QL L V
Sbjct: 3   SLRKLWLNDNKLVACPTELGSLTLLEMLSLSRNPFDELCLGIGYLTKLKDLQLDQLNLKV 62

Query: 119 ---------LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN----------- 158
                    L++  N LS LP  IG +  L +L L  N LR L  S  N           
Sbjct: 63  PPREIKIRSLEIRGNRLSRLPRTIGGLNLLSELHLDDNELRELPQSAKNLQMLVALHINN 122

Query: 159 ---GPTPALLKYLRS--RLPENEDS------EAST--TKEDLITMATRL----------- 194
                 P  L+YL S   L  N ++      E ST      L     R+           
Sbjct: 123 NQLDIWPPCLQYLTSITELFMNRNTIEFVPPECSTLVNLRHLEVSGNRIYDLPPQVGGWT 182

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
           S+T+  L ++   L A+P  + +  ++  L  + N+I   P E+ S  +L+TL LS+N I
Sbjct: 183 SLTT--LKMDSNRLPALPETLGQLSKVESLSFANNNIITFPMEVGSWHNLRTLDLSKNDI 240

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVP-----SDGFKDIPMLQI-----LDLS-YNIAS 303
           +  P +I  S +++  L L+ NPL Q+P       G + +   Q      LDLS + I+ 
Sbjct: 241 RFLPSSISNS-TAMRQLFLEGNPLIQLPLGMGSMRGLRKLSSSQAVLSRRLDLSGFTISV 299

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
           LP+      L  L EL +R   L+   ++I +L QL ++DLS N ++ +P     L+ L 
Sbjct: 300 LPKE--VIELTSLTELTMRDNNLKVVVSEIEQLPQLELVDLSSNRIKMLPATLGKLSRLR 357

Query: 364 ELDLSDNNISALP---PELGLLEPSLQALRLDGNPLRSI 399
            LD+  N +  LP   P        L+ L+LDGN ++ +
Sbjct: 358 RLDVRRNRLKHLPAMIPREISFCTLLKDLQLDGNRIQEL 396


>gi|359683928|ref|ZP_09253929.1| hypothetical protein Lsan2_04276 [Leptospira santarosai str.
           2000030832]
          Length = 594

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 142/430 (33%), Positives = 200/430 (46%), Gaps = 45/430 (10%)

Query: 1   MSKLD---VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 57
           + KLD   +  N+LT      I     L +L  + N L  +P+ IG L +L  L+L  N+
Sbjct: 121 LQKLDDLRLPNNQLTTFPKE-IEKLQKLQKLSLAHNQLTTLPKEIGKLQKLKVLNLDGNQ 179

Query: 58  ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 116
             ++P  I     L E ++G+N  + LP E+ KL  L  L L++NQLK    E  +L+ L
Sbjct: 180 FTTLPKEIEKLQKLKELHLGSNQFTTLPKEIKKLQNLQGLHLNNNQLKTLPKEIGKLQNL 239

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 176
             L L+NN L  LP EIGK+  L+ L L  N L TL         P  +  L++      
Sbjct: 240 QGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLTTL---------PKEIGKLQNLQGLGL 290

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
                TT    I    +L V    LS     L+ +P EI +   +  LDL  N +  L  
Sbjct: 291 HYNQLTTLPKEIGKLQKLQV----LSFYSNELTTLPKEIKKLQNLQWLDLHSNQLTTLSK 346

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD------------ 284
           E+     LQ L LS N++   P  I   L  L  L L +N L  +P +            
Sbjct: 347 EIGKLQKLQELHLSSNQLTTLPKEI-GKLQKLQELHLGDNQLTTLPEEIGKLQKLKKLYL 405

Query: 285 ----------GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
                        ++  L+ LDL  N + +LP      +L  L+ LYL   QL+  P +I
Sbjct: 406 YNNRLTTLPKEIGNLQKLRGLDLGNNKLTALP--IEIGNLQKLKWLYLTFNQLKTLPKEI 463

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
             LQ+LR LDLS N L +IPE   NL  L  LDLSDN ++ LP E+G L+  L+ L L G
Sbjct: 464 GNLQKLRGLDLSDNQLTTIPEEIGNLQKLRGLDLSDNQLTTLPKEIGNLQ-DLEVLYLSG 522

Query: 394 NPLRSIRRTI 403
           N L ++ + I
Sbjct: 523 NQLTTLPKEI 532



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 121/375 (32%), Positives = 180/375 (48%), Gaps = 43/375 (11%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S + L  +P+ IG+L  L +L L+ N++ ++P  I     L    +  N+L+ LP E+GK
Sbjct: 61  SNHKLTNLPKEIGNLQNLQKLSLYNNQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGK 120

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L KL  L L +NQL  +  E  +L +L  L L++N L+ LP EIGK+  L+ L L GN  
Sbjct: 121 LQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPKEIGKLQKLKVLNLDGNQF 180

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
            TL         P  ++ L+                             KEL L     +
Sbjct: 181 TTL---------PKEIEKLQKL---------------------------KELHLGSNQFT 204

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P EI +   +  L L+ N ++ LP E+    +LQ L L+ N++K  P  I   L +L 
Sbjct: 205 TLPKEIKKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLKTLPKEI-GKLQNLQ 263

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
            L L+NN L  +P +    +  LQ L L YN + +LP+      L  LQ L     +L  
Sbjct: 264 GLHLNNNQLTTLPKE-IGKLQNLQGLGLHYNQLTTLPK--EIGKLQKLQVLSFYSNELTT 320

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
            P +I +LQ L+ LDL  N L ++ +    L  L EL LS N ++ LP E+G L+  LQ 
Sbjct: 321 LPKEIKKLQNLQWLDLHSNQLTTLSKEIGKLQKLQELHLSSNQLTTLPKEIGKLQ-KLQE 379

Query: 389 LRLDGNPLRSIRRTI 403
           L L  N L ++   I
Sbjct: 380 LHLGDNQLTTLPEEI 394



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 195/399 (48%), Gaps = 25/399 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+ T L    I     L  L  + N L  +P+ IG L  L  L L+ N++ +
Sbjct: 193 LKELHLGSNQFTTLPKE-IKKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLKT 251

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I    +L   ++ NN L+ LP E+GKL  L  L LH NQL     E  +L +L VL
Sbjct: 252 LPKEIGKLQNLQGLHLNNNQLTTLPKEIGKLQNLQGLGLHYNQLTTLPKEIGKLQKLQVL 311

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
              +N L+ LP EI K+  L+ L L  N L TL   +  G    L              E
Sbjct: 312 SFYSNELTTLPKEIKKLQNLQWLDLHSNQLTTLSKEI--GKLQKL-------------QE 356

Query: 180 ASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
              +   L T+   +    K  EL L    L+ +P EI +  ++ KL L  N +  LP E
Sbjct: 357 LHLSSNQLTTLPKEIGKLQKLQELHLGDNQLTTLPEEIGKLQKLKKLYLYNNRLTTLPKE 416

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           + +   L+ L L  NK+   P  I  +L  L  L L  N L+ +P +   ++  L+ LDL
Sbjct: 417 IGNLQKLRGLDLGNNKLTALPIEI-GNLQKLKWLYLTFNQLKTLPKE-IGNLQKLRGLDL 474

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
           S N + ++PE     +L  L+ L L   QL   P +I  LQ L +L LS N L ++P+  
Sbjct: 475 SDNQLTTIPE--EIGNLQKLRGLDLSDNQLTTLPKEIGNLQDLEVLYLSGNQLTTLPKEI 532

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           +NL SL  L+LS+N +++ P E+G L+  L+ LRL+  P
Sbjct: 533 ENLQSLESLNLSNNPLTSFPEEIGKLQ-HLKWLRLENIP 570



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 129/412 (31%), Positives = 188/412 (45%), Gaps = 47/412 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I +   L +L    N L  +P+ IG L +L  LDL+ N + ++P  I     L +  + N
Sbjct: 72  IGNLQNLQKLSLYNNQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRLPN 131

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+  P E+ KL KL  L L  NQL     E  +L +L VL+L  N  + LP EI K+ 
Sbjct: 132 NQLTTFPKEIEKLQKLQKLSLAHNQLTTLPKEIGKLQKLKVLNLDGNQFTTLPKEIEKLQ 191

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLS 195
            L++L L  N   TL         P  +K L++   L  N +   +  KE  I     L 
Sbjct: 192 KLKELHLGSNQFTTL---------PKEIKKLQNLQGLHLNNNQLKTLPKE--IGKLQNL- 239

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              + L L    L  +P EI +   +  L L+ N +  LP E+    +LQ L L  N++ 
Sbjct: 240 ---QGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLTTLPKEIGKLQNLQGLGLHYNQLT 296

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             P  I   L  L  L   +N L  +P +  K +  LQ LDL  N + +L +      L 
Sbjct: 297 TLPKEI-GKLQKLQVLSFYSNELTTLPKE-IKKLQNLQWLDLHSNQLTTLSK--EIGKLQ 352

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-------------------- 354
            LQEL+L   QL   P +I +LQ+L+ L L  N L ++PE                    
Sbjct: 353 KLQELHLSSNQLTTLPKEIGKLQKLQELHLGDNQLTTLPEEIGKLQKLKKLYLYNNRLTT 412

Query: 355 ---GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
                 NL  L  LDL +N ++ALP E+G L+  L+ L L  N L+++ + I
Sbjct: 413 LPKEIGNLQKLRGLDLGNNKLTALPIEIGNLQ-KLKWLYLTFNQLKTLPKEI 463


>gi|312378183|gb|EFR24825.1| hypothetical protein AND_10342 [Anopheles darlingi]
          Length = 614

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 140/406 (34%), Positives = 186/406 (45%), Gaps = 50/406 (12%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
           RLDL ++ I  IPSS+  C SL EFY+  N +S+LP E+G L+ L TL L+ N L     
Sbjct: 137 RLDLSKSSITVIPSSVKDCTSLVEFYLYGNKISSLPPEIGCLANLKTLALNENSLTSLPD 196

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
               LR L VLDL +N LS +P  I K+ TL  L L  N +R +  +L N     +L   
Sbjct: 197 SLQNLRHLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIRIVGDNLKNLSNLTMLS-- 254

Query: 169 RSRLPENEDSEASTTKEDLITMAT-RLS--------------VTSKELSLEGMNLSAIPS 213
              L EN+  E       L+ + T  LS              V    L L+  +L  IP 
Sbjct: 255 ---LRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPKAIGNCVNLTALDLQHNDLLDIPE 311

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
            I     + +L L  N +  +P  L +C  +    +  N I   PD +L SLS+L+ + L
Sbjct: 312 TIGNLSNLMRLGLRYNQLTSIPATLRNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITL 371

Query: 274 DNNPLRQVPSDG---FKDIPML-----QILDLSYNIAS---------LPENPPFSSLP-- 314
             N     PS G   F ++  +     QI  + Y I S         + EN   +SLP  
Sbjct: 372 SRNAFHSYPSGGPAQFTNVTSINLEHNQIDKIQYGIFSRAKGLTKLNMKEN-ALTSLPLD 430

Query: 315 -----HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
                 + EL      L + P DI  LQ L IL LS N L+ IP    NL  L  LDL +
Sbjct: 431 IGTWTQMVELNFGTNSLTKLPDDIHCLQNLEILILSNNLLKRIPNTIGNLKKLRVLDLEE 490

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           N + +LP E+GLL   LQ L L  N L S+ RTI   G    L YL
Sbjct: 491 NRLESLPSEIGLLH-DLQKLILQSNQLNSLPRTI---GHLTNLTYL 532



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 182/422 (43%), Gaps = 86/422 (20%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N L  L    I +   LT L    N L  +PETIG+LS L+RL L  N++ S
Sbjct: 273 LTTLDLSHNHLKHLPK-AIGNCVNLTALDLQHNDLLDIPETIGNLSNLMRLGLRYNQLTS 331

Query: 61  IPSSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 119
           IP+++  C  + EF +  N +S LP   L  LS L T+ L  N    Y            
Sbjct: 332 IPATLRNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYP----------- 380

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
                  SG P +   +T++                                    E ++
Sbjct: 381 -------SGGPAQFTNVTSINL----------------------------------EHNQ 399

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
               +  + + A  L+    +L+++   L+++P +I    ++ +L+   NS+ +LP ++ 
Sbjct: 400 IDKIQYGIFSRAKGLT----KLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDIH 455

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+ LILS N +K  P+ I  +L  L  L L+ N L  +PS+               
Sbjct: 456 CLQNLEILILSNNLLKRIPNTI-GNLKKLRVLDLEENRLESLPSE--------------- 499

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                        L  LQ+L L+  QL   P  I  L  L  L + +N+LQ +PE    L
Sbjct: 500 ----------IGLLHDLQKLILQSNQLNSLPRTIGHLTNLTYLSVGENNLQFLPEEIGTL 549

Query: 360 TSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
            +L  L ++DN ++  LP EL L + +L  + ++  PL ++   ++  G   V++YLK  
Sbjct: 550 ENLESLYINDNASLIKLPYELALCQ-NLAIMSIENCPLSALPPEVVSGGPSLVIQYLKLH 608

Query: 419 IP 420
            P
Sbjct: 609 SP 610



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 1/85 (1%)

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           + ++ LDLS++S+  IP   K+ TSL E  L  N IS+LPPE+G L  +L+ L L+ N L
Sbjct: 133 ENIQRLDLSKSSITVIPSSVKDCTSLVEFYLYGNKISSLPPEIGCL-ANLKTLALNENSL 191

Query: 397 RSIRRTILDRGTKAVLKYLKDKIPE 421
            S+  ++ +     VL    +K+ E
Sbjct: 192 TSLPDSLQNLRHLKVLDLRHNKLSE 216


>gi|456875032|gb|EMF90266.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 664

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 134/402 (33%), Positives = 209/402 (51%), Gaps = 21/402 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++  N+LT L    I +   L EL    N    +P+ IG L +L  LDL  N++ ++P 
Sbjct: 242 LNLGVNQLTTLPKE-IGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPK 300

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I     L + Y+ +N L+ LP E+ KL  L  L L++NQL     E  +L +L  L L 
Sbjct: 301 EIEKLQKLQQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLE 360

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN L+ LP EIGK+  L+ L L+ N L TL   +        L++L+    EN  ++ +T
Sbjct: 361 NNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEI------GKLQHLQELHLEN--NQLTT 412

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
             +++  +        +EL L+   L+ +P EI +  ++ KL  S N    +P E+ +  
Sbjct: 413 LPKEIGKLQNL-----QELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQ 467

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +LQ L L  N++   P  I    +       DN  L  +P +  K +  LQ+L LS N +
Sbjct: 468 NLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQ-LATLPKEIGK-LQNLQLLYLSDNQL 525

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
            +LP+      L +LQELYLR  QL   P +I  LQ L++L+L+ N L ++P+   NL +
Sbjct: 526 TTLPK--EIGKLQNLQELYLRDNQLTTLPKEIGNLQNLQVLNLNHNRLTTLPKEIGNLQN 583

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L  L+L+ N ++ LP E+G L+ +LQ L LD N L ++   I
Sbjct: 584 LQVLNLNHNRLTTLPEEIGKLQ-NLQLLHLDNNQLTTLPEEI 624



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 131/382 (34%), Positives = 191/382 (50%), Gaps = 26/382 (6%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L EL    N L  +P+ I  L +L +L L+ NR+ ++P  I    +L    + N
Sbjct: 279 IGKLQKLQELDLGINQLTTLPKEIEKLQKLQQLYLYSNRLANLPEEIEKLQNLQWLGLNN 338

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP E+GKL KL  L L +NQL     E  +L+ L  L LSNN L+ LP EIGK+ 
Sbjct: 339 NQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQ 398

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L++L L  N L TL         P  +  L++      D    TT  + I    +L   
Sbjct: 399 HLQELHLENNQLTTL---------PKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKL--- 446

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            K+L   G   + +P EIW    +  L+L  N +  LP E+ +  +LQ L LS N++   
Sbjct: 447 -KKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATL 505

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY----NIASLPENPPFSSL 313
           P  I   L +L  L L +N L  +P    K+I  LQ L   Y     + +LP+     +L
Sbjct: 506 PKEI-GKLQNLQLLYLSDNQLTTLP----KEIGKLQNLQELYLRDNQLTTLPK--EIGNL 558

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
            +LQ L L   +L   P +I  LQ L++L+L+ N L ++PE    L +L  L L +N ++
Sbjct: 559 QNLQVLNLNHNRLTTLPKEIGNLQNLQVLNLNHNRLTTLPEEIGKLQNLQLLHLDNNQLT 618

Query: 374 ALPPELGLLEPSLQALRLDGNP 395
            LP E+G L+ +L+ L L GNP
Sbjct: 619 TLPEEIGKLQ-NLKELDLVGNP 639



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 131/387 (33%), Positives = 188/387 (48%), Gaps = 20/387 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  S N L  +P+ IG L  L +L+L +NR+ ++P  I    +L E ++  
Sbjct: 164 IGKLQNLRDLDLSSNQLTILPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTR 223

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP E+GKL  L  L+L  NQL     E   L +L  L L +N  + LP  IGK+ 
Sbjct: 224 NRLANLPEEIGKLQNLQILNLGVNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQ 283

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L++L L  N L TL   +       L K  +  L  N  +      E L  +       
Sbjct: 284 KLQELDLGINQLTTLPKEI-----EKLQKLQQLYLYSNRLANLPEEIEKLQNLQW----- 333

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L L    L+ +P EI +  ++  L L  N +  LP E+    +LQ L LS N++   
Sbjct: 334 ---LGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTL 390

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P  I   L  L  L L+NN L  +P +  K +  LQ L L YN + +LPE      L  L
Sbjct: 391 PKEI-GKLQHLQELHLENNQLTTLPKEIGK-LQNLQELRLDYNRLTTLPE--EIEKLQKL 446

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           ++LY    Q    P +I  LQ L+ L+L  N L S+P+   NL +L  L LSDN ++ LP
Sbjct: 447 KKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLP 506

Query: 377 PELGLLEPSLQALRLDGNPLRSIRRTI 403
            E+G L+ +LQ L L  N L ++ + I
Sbjct: 507 KEIGKLQ-NLQLLYLSDNQLTTLPKEI 532



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 117/348 (33%), Positives = 172/348 (49%), Gaps = 24/348 (6%)

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 118
           ++P  I    +L +  + +N L+ LP E+GKL  L  L+L  N+L     E  +L+ L  
Sbjct: 159 TLPKEIGKLQNLRDLDLSSNQLTILPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQE 218

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           L L+ N L+ LP EIGK+  L+ L L  N L TL   + N     L K     L +N+  
Sbjct: 219 LHLTRNRLANLPEEIGKLQNLQILNLGVNQLTTLPKEIGN-----LQKLQELYLGDNQ-- 271

Query: 179 EASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
                     T+   +    K  EL L    L+ +P EI +  ++ +L L  N +  LP 
Sbjct: 272 --------FATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQQLYLYSNRLANLPE 323

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    +LQ L L+ N++   P  I   L  L  L L+NN L  +P +  K +  LQ L 
Sbjct: 324 EIEKLQNLQWLGLNNNQLTTLPKEI-GKLQKLEALHLENNQLTTLPKEIGK-LQNLQWLG 381

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           LS N + +LP+      L HLQEL+L   QL   P +I +LQ L+ L L  N L ++PE 
Sbjct: 382 LSNNQLTTLPK--EIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEE 439

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            + L  L +L  S N  + +P E+  L+ +LQAL L  N L S+ + I
Sbjct: 440 IEKLQKLKKLYSSGNQFTTVPEEIWNLQ-NLQALNLYSNQLTSLPKEI 486



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 133/282 (47%), Gaps = 17/282 (6%)

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
           SN+ L  LP EIGK+  LR L L+ N L  L   +        L   R+RL        +
Sbjct: 153 SNDPLWTLPKEIGKLQNLRDLDLSSNQLTILPKEIGKLQNLQKLNLTRNRL--------A 204

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
              E++  +        +EL L    L+ +P EI +   +  L+L  N +  LP E+ + 
Sbjct: 205 NLPEEIGKLQ-----NLQELHLTRNRLANLPEEIGKLQNLQILNLGVNQLTTLPKEIGNL 259

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
             LQ L L  N+    P AI   L  L  L L  N L  +P +  K   + Q+   S  +
Sbjct: 260 QKLQELYLGDNQFATLPKAI-GKLQKLQELDLGINQLTTLPKEIEKLQKLQQLYLYSNRL 318

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
           A+LPE      L +LQ L L   QL   P +I +LQ+L  L L  N L ++P+    L +
Sbjct: 319 ANLPE--EIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQN 376

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L  L LS+N ++ LP E+G L+  LQ L L+ N L ++ + I
Sbjct: 377 LQWLGLSNNQLTTLPKEIGKLQ-HLQELHLENNQLTTLPKEI 417



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 1/102 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+LT L    I +   L  L  + N L  +P+ IG+L  L  L+L+ NR+ +
Sbjct: 538 LQELYLRDNQLTTLPKE-IGNLQNLQVLNLNHNRLTTLPKEIGNLQNLQVLNLNHNRLTT 596

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 102
           +P  I    +L   ++ NN L+ LP E+GKL  L  LDL  N
Sbjct: 597 LPEEIGKLQNLQLLHLDNNQLTTLPEEIGKLQNLKELDLVGN 638


>gi|298241193|ref|ZP_06965000.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297554247|gb|EFH88111.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 349

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/335 (34%), Positives = 167/335 (49%), Gaps = 42/335 (12%)

Query: 45  LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 104
           L  LI LD+    +  +P+ +    SL E Y+  N L  +PAELG+L  L  L L  NQL
Sbjct: 30  LGNLITLDISDKGLTQVPAELGQLRSLQELYLFGNQLREVPAELGQLRSLQELYLAGNQL 89

Query: 105 KEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 163
           +E   E  QLR L  L LS N L+G+P E+G++  L++L L+GN LR           P 
Sbjct: 90  REVPAELGQLRSLQELYLSGNQLTGIPTELGQLRGLQELYLSGNQLRE---------VPT 140

Query: 164 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 223
            L  LR                DL             L L G  L  +P+E+ +  ++  
Sbjct: 141 ELGQLR----------------DL-----------HMLDLSGNQLREVPAELGQLRDLHM 173

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           LDLS N ++E+P EL   + L+ L L+ N++++ P A L  L  L  L L  N LR+VP+
Sbjct: 174 LDLSGNQLREVPAELGQLSRLEKLYLAGNQLREVP-AELGQLRGLQELYLSGNQLREVPT 232

Query: 284 DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 342
           +    +  LQ LDLS N +  +P       L  LQ+LYL   QLRE P ++ +L+ L +L
Sbjct: 233 E-LGQLRDLQELDLSGNQLTGIPTE--LGQLCGLQDLYLAGNQLREVPAELGQLRDLHML 289

Query: 343 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           DLS N L+ +P     L+ L    + DN+    PP
Sbjct: 290 DLSGNQLREVPAELGQLSRLHAFCIEDNDQLLTPP 324



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/323 (34%), Positives = 152/323 (47%), Gaps = 64/323 (19%)

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           +  L+ +PAELG+L  L  L L  NQL+E   E  QLR L  L L+ N L  +P E+G++
Sbjct: 40  DKGLTQVPAELGQLRSLQELYLFGNQLREVPAELGQLRSLQELYLAGNQLREVPAELGQL 99

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
            +L++L L+GN L  +         P  L  LR                           
Sbjct: 100 RSLQELYLSGNQLTGI---------PTELGQLRG-------------------------- 124

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             +EL L G  L  +P+E+ +  ++  LDLS N ++E+P EL     L  L LS N++++
Sbjct: 125 -LQELYLSGNQLREVPTELGQLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLRE 183

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 316
            P A L  LS L  L L  N LR+VP++                            L  L
Sbjct: 184 VP-AELGQLSRLEKLYLAGNQLREVPAE-------------------------LGQLRGL 217

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           QELYL   QLRE PT++ +L+ L+ LDLS N L  IP     L  L +L L+ N +  +P
Sbjct: 218 QELYLSGNQLREVPTELGQLRDLQELDLSGNQLTGIPTELGQLCGLQDLYLAGNQLREVP 277

Query: 377 PELGLLEPSLQALRLDGNPLRSI 399
            ELG L   L  L L GN LR +
Sbjct: 278 AELGQLR-DLHMLDLSGNQLREV 299



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 136/285 (47%), Gaps = 39/285 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L + GN+L  +   L      L EL  + N L  +P  +G L  L  L L  N++  
Sbjct: 56  LQELYLFGNQLREVPAEL-GQLRSLQELYLAGNQLREVPAELGQLRSLQELYLSGNQLTG 114

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           IP+ +     L E Y+  N L  +P ELG+L  L  LDL  NQL+E   E  QLR L +L
Sbjct: 115 IPTELGQLRGLQELYLSGNQLREVPTELGQLRDLHMLDLSGNQLREVPAELGQLRDLHML 174

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DLS N L  +P E+G+++ L KL L GN LR           PA L  LR          
Sbjct: 175 DLSGNQLREVPAELGQLSRLEKLYLAGNQLRE---------VPAELGQLRG--------- 216

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              +EL L G  L  +P+E+ +  ++ +LDLS N +  +P EL 
Sbjct: 217 ------------------LQELYLSGNQLREVPTELGQLRDLQELDLSGNQLTGIPTELG 258

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
               LQ L L+ N++++ P A L  L  L  L L  N LR+VP++
Sbjct: 259 QLCGLQDLYLAGNQLREVP-AELGQLRDLHMLDLSGNQLREVPAE 302



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 106/193 (54%), Gaps = 8/193 (4%)

Query: 210 AIPSEIW--EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
            IP+++   + G +  LD+S   + ++P EL    SLQ L L  N++++ P A L  L S
Sbjct: 20  VIPNDVKYDDLGNLITLDISDKGLTQVPAELGQLRSLQELYLFGNQLREVP-AELGQLRS 78

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L L  N LR+VP++    +  LQ L LS N +  +P       L  LQELYL   QL
Sbjct: 79  LQELYLAGNQLREVPAE-LGQLRSLQELYLSGNQLTGIPTE--LGQLRGLQELYLSGNQL 135

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
           RE PT++ +L+ L +LDLS N L+ +P     L  L  LDLS N +  +P ELG L   L
Sbjct: 136 REVPTELGQLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQL-SRL 194

Query: 387 QALRLDGNPLRSI 399
           + L L GN LR +
Sbjct: 195 EKLYLAGNQLREV 207



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 2/132 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL + GN+L  +   L      L EL  S N L  +P  +G L  L  LDL  N++  
Sbjct: 194 LEKLYLAGNQLREVPAEL-GQLRGLQELYLSGNQLREVPTELGQLRDLQELDLSGNQLTG 252

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP+ +   C L + Y+  N L  +PAELG+L  L  LDL  NQL+E   E  QL RL   
Sbjct: 253 IPTELGQLCGLQDLYLAGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLHAF 312

Query: 120 DLSNNSLSGLPP 131
            + +N     PP
Sbjct: 313 CIEDNDQLLTPP 324


>gi|417781236|ref|ZP_12428988.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778487|gb|EKR63113.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 400

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 126/349 (36%), Positives = 182/349 (52%), Gaps = 26/349 (7%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L LH N   ++P  I    +L + Y+ NN L ALP E+GKL KL  L L++NQL     E
Sbjct: 47  LSLHNNE--TLPKEIGELQNLTKLYLSNNQLQALPKEIGKLKKLQVLTLNNNQLTTIPNE 104

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L+ L VL L NN L  LP EIGK+  L+ L L  N L+TL         P  ++YL+
Sbjct: 105 IGELKKLQVLYLDNNQLQALPKEIGKLKKLQVLYLNDNQLKTL---------PKEIEYLQ 155

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLS 227
                    E  +T   L T+   +      +EL L    L+ +P EI +   +  L L 
Sbjct: 156 KL------RELDSTNNPLTTLPKEIGYLKNLEELILSNNELTTLPKEIGKLKNLQVLYLG 209

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            + +  LP ++    +LQ L L+  ++   P+ I   L +L  L L +N L+ +P+D  K
Sbjct: 210 ADLLTTLPNDIGYLKNLQKLYLNTGRLTTLPNDI-GYLKNLQELYLSDNQLKTLPNDIGK 268

Query: 288 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
            +  LQ+L LS N + +LP+   F  L  L+EL L   QL   P +  +LQ LR L+LS 
Sbjct: 269 -LKNLQVLHLSGNQLTTLPK--EFGKLQSLRELNLSGNQLTTLPKEFGKLQSLRELNLSG 325

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           N L ++P+    L SL EL+LS N ++ LP E+G L+ +LQ L LD  P
Sbjct: 326 NQLTTLPKEIGKLQSLRELNLSGNQLTTLPKEIGHLK-NLQELYLDDIP 373



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 132/284 (46%), Gaps = 20/284 (7%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L +  N+LT + N  I     L  L    N L  +P+ IG L +L  L L+ N++ ++P 
Sbjct: 91  LTLNNNQLTTIPNE-IGELKKLQVLYLDNNQLQALPKEIGKLKKLQVLYLNDNQLKTLPK 149

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L E    NN L+ LP E+G L  L  L L +N+L     E  +L+ L VL L 
Sbjct: 150 EIEYLQKLRELDSTNNPLTTLPKEIGYLKNLEELILSNNELTTLPKEIGKLKNLQVLYLG 209

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NEDSEA 180
            + L+ LP +IG +  L+KL L    L TL         P  + YL++ L E    D++ 
Sbjct: 210 ADLLTTLPNDIGYLKNLQKLYLNTGRLTTL---------PNDIGYLKN-LQELYLSDNQL 259

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
            T   D I     L V    L L G  L+ +P E  +   + +L+LS N +  LP E   
Sbjct: 260 KTLPND-IGKLKNLQV----LHLSGNQLTTLPKEFGKLQSLRELNLSGNQLTTLPKEFGK 314

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
             SL+ L LS N++   P  I   L SL  L L  N L  +P +
Sbjct: 315 LQSLRELNLSGNQLTTLPKEI-GKLQSLRELNLSGNQLTTLPKE 357



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 65/148 (43%), Gaps = 23/148 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+L  L N+ I     L  L  S N L  +P+  G L  L  L+L  N++ +
Sbjct: 249 LQELYLSDNQLKTLPND-IGKLKNLQVLHLSGNQLTTLPKEFGKLQSLRELNLSGNQLTT 307

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P       SL E  +  N L+ LP E+GKL  L  L+L  NQ                 
Sbjct: 308 LPKEFGKLQSLRELNLSGNQLTTLPKEIGKLQSLRELNLSGNQ----------------- 350

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
                L+ LP EIG +  L++L L   P
Sbjct: 351 -----LTTLPKEIGHLKNLQELYLDDIP 373


>gi|418712123|ref|ZP_13272868.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791390|gb|EKR85066.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 475

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 135/402 (33%), Positives = 197/402 (49%), Gaps = 44/402 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+   KLT+L    I     L EL  S N L  +P+ +G L  L RL+L+  ++ ++P 
Sbjct: 53  LDLRYQKLTILPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPK 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  +  N+L+ LP E+G+L  L  LDLH N+L    +E  QL+ L  LDL+
Sbjct: 112 EIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLN 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N L+ LP EI ++  L++L L  N L TL         P  +  L++            
Sbjct: 172 SNKLTTLPKEIRQLRNLQELDLHRNQLTTL---------PKEIGQLQN------------ 210

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                           K L+L    L+ +P EI E   +  L+L  N +  LP E+    
Sbjct: 211 ---------------LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 255

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +L+ L+L  N+I   P  I   L +L  L L  N L  +P +    +  LQ LDL  N +
Sbjct: 256 NLEILVLRENRITALPKEI-GQLQNLQWLDLHQNQLTTLPKE-IGQLQNLQRLDLHQNQL 313

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
            +LP+      L +LQEL L   QL   P +I +LQ LR+LDL  N L ++P+    L S
Sbjct: 314 TTLPK--EIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQS 371

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L  L L  N +S LP E+G L+ +LQ L L  N L ++ + I
Sbjct: 372 LQVLALGSNRLSTLPKEIGQLQ-NLQVLGLISNQLTTLPKEI 412



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 128/385 (33%), Positives = 186/385 (48%), Gaps = 38/385 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++   KLT L    I     L EL  S N L  +P+ +G L  L RLDLHQNR+ +
Sbjct: 96  LQRLNLNSQKLTTLPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLAT 154

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  + +N L+ LP E+ +L  L  LDLH NQL     E  QL+ L  L
Sbjct: 155 LPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTL 214

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L    L+ LP EIG++  L+ L L  N L TL   +  G    L               
Sbjct: 215 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI--GELQNL--------------- 257

Query: 180 ASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
                E L+    R++   KE         L L    L+ +P EI +   + +LDL +N 
Sbjct: 258 -----EILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQ 312

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           +  LP E+    +LQ L L  N++   P  I   L +L  L LDNN L  +P +  + + 
Sbjct: 313 LTTLPKEIGQLQNLQELCLDENQLTTLPKEI-EQLQNLRVLDLDNNQLTTLPKEVLR-LQ 370

Query: 291 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
            LQ+L L  N +++LP+      L +LQ L L   QL   P +I +LQ L+ L L +N L
Sbjct: 371 SLQVLALGSNRLSTLPK--EIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQL 428

Query: 350 QSIPEGFKNLTSLTELDLSDNNISA 374
            + P+  + L +L EL L  N +S+
Sbjct: 429 TTFPKEIRQLKNLQELHLYLNPLSS 453



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 149/313 (47%), Gaps = 40/313 (12%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L++  LDL    L+ LP EIG++  L++L L+ N L TL         P  +  L +   
Sbjct: 48  LKVRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTL---------PKEVGQLENLQR 98

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
            N +S+  TT    I     L    +EL L   +L+ +P E+ +   + +LDL +N +  
Sbjct: 99  LNLNSQKLTTLPKEIGQLRNL----QELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLAT 154

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF------- 286
           LP E+    +LQ L L+ NK+   P  I   L +L  L L  N L  +P +         
Sbjct: 155 LPMEIGQLKNLQELDLNSNKLTTLPKEI-RQLRNLQELDLHRNQLTTLPKEIGQLQNLKT 213

Query: 287 ------------KDIPMLQILD----LSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 330
                       K+I  LQ L     L   + +LP+      L +L+ L LR  ++   P
Sbjct: 214 LNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPK--EIGELQNLEILVLRENRITALP 271

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +I +LQ L+ LDL QN L ++P+    L +L  LDL  N ++ LP E+G L+ +LQ L 
Sbjct: 272 KEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ-NLQELC 330

Query: 391 LDGNPLRSIRRTI 403
           LD N L ++ + I
Sbjct: 331 LDENQLTTLPKEI 343



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 119/229 (51%), Gaps = 8/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+SE+ T  +  +  A +  +  + L L    L+ +P EI +   + +LDLS NS+  LP
Sbjct: 30  EESESGTYTD--LAKALQNPLKVRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L L+  K+   P  I   L +L  L L  N L  +P +    +  LQ L
Sbjct: 88  KEVGQLENLQRLNLNSQKLTTLPKEI-GQLRNLQELDLSFNSLTTLPKE-VGQLENLQRL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           DL  N +A+LP       L +LQEL L   +L   P +I +L+ L+ LDL +N L ++P+
Sbjct: 146 DLHQNRLATLP--MEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L  L+L    ++ LP E+G L+ +L+ L L  N L ++ + I
Sbjct: 204 EIGQLQNLKTLNLIVTQLTTLPKEIGELQ-NLKTLNLLDNQLTTLPKEI 251


>gi|186681684|ref|YP_001864880.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
 gi|186464136|gb|ACC79937.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
          Length = 1185

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 196/380 (51%), Gaps = 20/380 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           IA  + LT LI S N +  +PE I +L+ L RL+L  N+I  IP  I+   +L   Y+  
Sbjct: 145 IAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQITQIPEVIAKLTNLTLLYLSG 204

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMT 137
           N ++ +P  + +L+ L  LDL  N++ E      Q   L+VLDLS+N ++ +P  I ++T
Sbjct: 205 NQITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQSTNLTVLDLSSNQITKIPEAIAQLT 264

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L+ L L+ N +  +  +L N     L   ++  L  N+ +E      +L  +       
Sbjct: 265 NLKLLYLSDNQITEIPEALAN-----LTNLMQLHLSSNQITEIPEALANLTNLT------ 313

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             +L L G  ++ IP  +     +T+L L  N I E+P  L++  +L  L+L  N+I + 
Sbjct: 314 --QLYLSGNQITEIPEALANLPNLTRLYLYSNQITEIPEALANLTNLIQLVLFSNQIAEI 371

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P+  L +L++L  L L +N + ++P +    +  L  LDL +N I  +P+    ++L +L
Sbjct: 372 PET-LANLTNLIQLVLFSNQIAEIP-ETLAKLTNLTRLDLRFNQITQIPK--VIANLTNL 427

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
            EL+L   Q+ + P  +  L  L  L  S N +  IP     LT+LT+LDLS N I+ +P
Sbjct: 428 TELHLSSNQITQIPEALANLTNLTQLYFSSNQITQIPGAIAKLTNLTQLDLSGNQITEIP 487

Query: 377 PELGLLEPSLQALRLDGNPL 396
             +  L   L+ L L GNPL
Sbjct: 488 EAIESLS-KLEKLDLRGNPL 506



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 192/386 (49%), Gaps = 18/386 (4%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           IA+ T LT+LI S N +  +PE I  LS L  L    N+I  IP +I+   +L    + +
Sbjct: 122 IANLTNLTQLILSYNQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSS 181

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++ +P  + KL+ L  L L  NQ+ E      QL  L++LDLS+N ++ +P  I + T
Sbjct: 182 NQITQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQST 241

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L+ N +  +  ++       LL YL        D++ +   E L  +   +   
Sbjct: 242 NLTVLDLSSNQITKIPEAIAQLTNLKLL-YLS-------DNQITEIPEALANLTNLM--- 290

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             +L L    ++ IP  +     +T+L LS N I E+P  L++  +L  L L  N+I + 
Sbjct: 291 --QLHLSSNQITEIPEALANLTNLTQLYLSGNQITEIPEALANLPNLTRLYLYSNQITEI 348

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P+A L +L++L  L L +N + ++P        ++Q++  S  IA +PE    + L +L 
Sbjct: 349 PEA-LANLTNLIQLVLFSNQIAEIPETLANLTNLIQLVLFSNQIAEIPET--LAKLTNLT 405

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L LR  Q+ + P  I  L  L  L LS N +  IPE   NLT+LT+L  S N I+ +P 
Sbjct: 406 RLDLRFNQITQIPKVIANLTNLTELHLSSNQITQIPEALANLTNLTQLYFSSNQITQIPG 465

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +  L  +L  L L GN +  I   I
Sbjct: 466 AIAKL-TNLTQLDLSGNQITEIPEAI 490



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 184/376 (48%), Gaps = 20/376 (5%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
            S N L  +P  +  L  L +LD+  N + SIP  ++    L E  +    L+ +P  + 
Sbjct: 64  VSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPDAIA 123

Query: 90  KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
            L+ L  L L  NQ+ +      +L  L+VL  S+N ++ +P  I  +T L +L L+ N 
Sbjct: 124 NLTNLTQLILSYNQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQ 183

Query: 149 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 208
           +  +   ++   T   L YL      N+ +E      + I   T L++    L L    +
Sbjct: 184 ITQI-PEVIAKLTNLTLLYLSG----NQITEIP----EAIAQLTNLTL----LDLSDNKI 230

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
           + IP  I ++  +T LDLS N I ++P  ++   +L+ L LS N+I + P+A L +L++L
Sbjct: 231 TEIPEAITQSTNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPEA-LANLTNL 289

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 327
             L L +N + ++P +   ++  L  L LS N I  +PE    ++LP+L  LYL   Q+ 
Sbjct: 290 MQLHLSSNQITEIP-EALANLTNLTQLYLSGNQITEIPE--ALANLPNLTRLYLYSNQIT 346

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
           E P  +  L  L  L L  N +  IPE   NLT+L +L L  N I+ +P  L  L  +L 
Sbjct: 347 EIPEALANLTNLIQLVLFSNQIAEIPETLANLTNLIQLVLFSNQIAEIPETLAKL-TNLT 405

Query: 388 ALRLDGNPLRSIRRTI 403
            L L  N +  I + I
Sbjct: 406 RLDLRFNQITQIPKVI 421



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 166/338 (49%), Gaps = 20/338 (5%)

Query: 73  EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE 132
           E  +    L+ LP E+GKL +L +L L   +++ Y          V   S N+L  LP E
Sbjct: 20  ELDLSGQELTELPVEIGKLQQLESLIL-GKKVEGYERVGDHFLEKV---SGNNLKTLPLE 75

Query: 133 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-EDLITMA 191
           +  +  LRKL ++GNPL ++   +        L  +R  L E  D+ A+ T    LI   
Sbjct: 76  LLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPDAIANLTNLTQLILSY 135

Query: 192 TRLSVTSKELS---------LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
            +++   + ++              ++ IP  I     +T+L+LS N I ++P  ++   
Sbjct: 136 NQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQITQIPEVIAKLT 195

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +L  L LS N+I + P+AI   L++L+ L L +N + ++P +       L +LDLS N I
Sbjct: 196 NLTLLYLSGNQITEIPEAI-AQLTNLTLLDLSDNKITEIP-EAITQSTNLTVLDLSSNQI 253

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
             +PE    + L +L+ LYL   Q+ E P  +  L  L  L LS N +  IPE   NLT+
Sbjct: 254 TKIPE--AIAQLTNLKLLYLSDNQITEIPEALANLTNLMQLHLSSNQITEIPEALANLTN 311

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LT+L LS N I+ +P  L  L P+L  L L  N +  I
Sbjct: 312 LTQLYLSGNQITEIPEALANL-PNLTRLYLYSNQITEI 348



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 137/308 (44%), Gaps = 52/308 (16%)

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LDLS   L+ LP EIGK+  L  L+L            V G       +L          
Sbjct: 21  LDLSGQELTELPVEIGKLQQLESLIL---------GKKVEGYERVGDHFLEK-------- 63

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                                   + G NL  +P E+     + KLD+S N ++ +P  +
Sbjct: 64  ------------------------VSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVV 99

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +    L+ LIL R ++ + PDAI  +L++L+ L L  N + Q+P +    +  L +L  S
Sbjct: 100 TQILHLEELILIRVELTEIPDAI-ANLTNLTQLILSYNQITQIP-EAIAKLSNLTVLIFS 157

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N I  +PE    ++L +L  L L   Q+ + P  I +L  L +L LS N +  IPE   
Sbjct: 158 DNKITQIPE--AIANLTNLTRLNLSSNQITQIPEVIAKLTNLTLLYLSGNQITEIPEAIA 215

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
            LT+LT LDLSDN I+ + PE      +L  L L  N +  I   I  + T   L YL D
Sbjct: 216 QLTNLTLLDLSDNKITEI-PEAITQSTNLTVLDLSSNQITKIPEAI-AQLTNLKLLYLSD 273

Query: 418 ----KIPE 421
               +IPE
Sbjct: 274 NQITEIPE 281



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 120/253 (47%), Gaps = 38/253 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N++T +   L A+ T LT+L  S N +  +PE + +L  L RL L+ N+I  
Sbjct: 289 LMQLHLSSNQITEIPEAL-ANLTNLTQLYLSGNQITEIPEALANLPNLTRLYLYSNQITE 347

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP +++   +L +  + +N ++ +P  L  L+ L  L L SNQ+ E      +L  L+ L
Sbjct: 348 IPEALANLTNLIQLVLFSNQIAEIPETLANLTNLIQLVLFSNQIAEIPETLAKLTNLTRL 407

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL  N ++ +P  I  +T L +L L+ N +  +  +L N                     
Sbjct: 408 DLRFNQITQIPKVIANLTNLTELHLSSNQITQIPEALAN--------------------- 446

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                   +T  T+L  +S +++        IP  I +   +T+LDLS N I E+P  + 
Sbjct: 447 --------LTNLTQLYFSSNQIT-------QIPGAIAKLTNLTQLDLSGNQITEIPEAIE 491

Query: 240 SCASLQTLILSRN 252
           S + L+ L L  N
Sbjct: 492 SLSKLEKLDLRGN 504



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 93/182 (51%), Gaps = 11/182 (6%)

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           +LDLS   + ELP E+     L++LIL + K++ +       +      K+  N L+ +P
Sbjct: 20  ELDLSGQELTELPVEIGKLQQLESLILGK-KVEGY-----ERVGDHFLEKVSGNNLKTLP 73

Query: 283 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
            +    +P L+ LD+S N + S+P+    + + HL+EL L R++L E P  I  L  L  
Sbjct: 74  LE-LLGLPNLRKLDISGNPLESIPD--VVTQILHLEELILIRVELTEIPDAIANLTNLTQ 130

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
           L LS N +  IPE    L++LT L  SDN I+ +P  +  L  +L  L L  N +  I  
Sbjct: 131 LILSYNQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIANL-TNLTRLNLSSNQITQIPE 189

Query: 402 TI 403
            I
Sbjct: 190 VI 191



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 1/105 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  N++T +   L A+ T LT+L  S N +  +P  I  L+ L +LDL  N+I  
Sbjct: 427 LTELHLSSNQITQIPEAL-ANLTNLTQLYFSSNQITQIPGAIAKLTNLTQLDLSGNQITE 485

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 105
           IP +I     L +  +  N L   P  LG    +G+++   N L+
Sbjct: 486 IPEAIESLSKLEKLDLRGNPLPISPEILGSSDDVGSVEDIFNYLQ 530



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 8/84 (9%)

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           +EL L   +L E P +I +LQQL  L L +       EG++ +       +S NN+  LP
Sbjct: 19  RELDLSGQELTELPVEIGKLQQLESLILGKKV-----EGYERVGDHFLEKVSGNNLKTLP 73

Query: 377 PE-LGLLEPSLQALRLDGNPLRSI 399
            E LGL  P+L+ L + GNPL SI
Sbjct: 74  LELLGL--PNLRKLDISGNPLESI 95


>gi|359462280|ref|ZP_09250843.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
           5410]
          Length = 1235

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 138/418 (33%), Positives = 205/418 (49%), Gaps = 21/418 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  N+LT +    I     LTEL   +N L  +P+ IG L  L  L L QN+++ 
Sbjct: 91  LTQLRLHQNRLTEVPEE-IGQLASLTELSLFQNQLTEVPKEIGQLINLTELYLSQNQLMK 149

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  +    SL + Y+  N L+  P ELGKL  L  L L  NQL E   E  QL  L  L
Sbjct: 150 IPKDLERLISLTKLYLSQNQLTEAPKELGKLINLMELYLSQNQLTEVPKEFGQLTSLIKL 209

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +LS N L+G+P E+G++ +L +L L+ N L  +         P  L  L +    + D  
Sbjct: 210 NLSQNRLTGVPQELGELKSLTELHLSQNKLMEV---------PKELGKLTNLTWLHIDQN 260

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             T   + I   T+L+    ELSL    L  +P E+ +   +T+  LS+N + E+P E+ 
Sbjct: 261 QLTEIPEEIGQLTKLT----ELSLSHNQLKEVPKELGQLARLTRFSLSQNQLIEIPKEIG 316

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
             A L  L + +N++ + P   L+ L +L+ L L  N L ++P +    +  L  L LS 
Sbjct: 317 KIAKLIWLRIDQNQLTEVPRE-LSQLVNLTRLHLHQNQLTKIPKE-LGKVTKLTELSLSQ 374

Query: 300 NIASLPENPP-FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N   L E P     L +L EL L + QL + P ++ +L  L  L LS N L  +P+    
Sbjct: 375 N--QLIEVPKELGQLINLVELRLNQNQLTKVPKELGKLTNLTRLHLSYNKLIEVPKELGK 432

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
           L SL ELDL  N ++ +P ELG L   L  L L  N L        ++G +    YL+
Sbjct: 433 LASLRELDLDQNQLTKVPKELGKL-AKLVILDLSNNSLNPELSAAYEQGLETFFAYLQ 489



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 137/412 (33%), Positives = 205/412 (49%), Gaps = 26/412 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN+LT +    I   T L  L  S N L  +P+ IG L+ L +L LHQNR+  +P 
Sbjct: 48  LSLSGNQLTEVPKE-IGKLTNLIALSLSGNQLTEVPKEIGKLANLTQLRLHQNRLTEVPE 106

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I    SL E  +  N L+ +P E+G+L  L  L L  NQL +   +  +L  L+ L LS
Sbjct: 107 EIGQLASLTELSLFQNQLTEVPKEIGQLINLTELYLSQNQLMKIPKDLERLISLTKLYLS 166

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR-----LPENED 177
            N L+  P E+GK+  L +L L+ N L  +      G   +L+K   S+     +P+   
Sbjct: 167 QNQLTEAPKELGKLINLMELYLSQNQLTEVPKEF--GQLTSLIKLNLSQNRLTGVPQELG 224

Query: 178 SEASTTKEDLITMATRLSVTSKELS---------LEGMNLSAIPSEIWEAGEITKLDLSR 228
              S T  +L     +L    KEL          ++   L+ IP EI +  ++T+L LS 
Sbjct: 225 ELKSLT--ELHLSQNKLMEVPKELGKLTNLTWLHIDQNQLTEIPEEIGQLTKLTELSLSH 282

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N ++E+P EL   A L    LS+N++ + P  I   ++ L  L++D N L +VP +    
Sbjct: 283 NQLKEVPKELGQLARLTRFSLSQNQLIEIPKEI-GKIAKLIWLRIDQNQLTEVPRE-LSQ 340

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  L  L L  N +  +P+      +  L EL L + QL E P ++ +L  L  L L+QN
Sbjct: 341 LVNLTRLHLHQNQLTKIPKE--LGKVTKLTELSLSQNQLIEVPKELGQLINLVELRLNQN 398

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            L  +P+    LT+LT L LS N +  +P ELG L  SL+ L LD N L  +
Sbjct: 399 QLTKVPKELGKLTNLTRLHLSYNKLIEVPKELGKL-ASLRELDLDQNQLTKV 449



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 191/380 (50%), Gaps = 23/380 (6%)

Query: 25  LTELIA---SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 81
           LT LIA   S N L  +P+ IG L+ LI L L  N++  +P  I    +L +  +  N L
Sbjct: 42  LTNLIALSLSGNQLTEVPKEIGKLTNLIALSLSGNQLTEVPKEIGKLANLTQLRLHQNRL 101

Query: 82  SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 140
           + +P E+G+L+ L  L L  NQL E   E  QL  L+ L LS N L  +P ++ ++ +L 
Sbjct: 102 TEVPEEIGQLASLTELSLFQNQLTEVPKEIGQLINLTELYLSQNQLMKIPKDLERLISLT 161

Query: 141 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 200
           KL L+ N L      L       L+  +   L +N+ +E       L ++         +
Sbjct: 162 KLYLSQNQLTEAPKEL-----GKLINLMELYLSQNQLTEVPKEFGQLTSLI--------K 208

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L+L    L+ +P E+ E   +T+L LS+N + E+P EL    +L  L + +N++ + P+ 
Sbjct: 209 LNLSQNRLTGVPQELGELKSLTELHLSQNKLMEVPKELGKLTNLTWLHIDQNQLTEIPEE 268

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I   L+ L+ L L +N L++VP +    +  L    LS N +  +P+      +  L  L
Sbjct: 269 I-GQLTKLTELSLSHNQLKEVPKE-LGQLARLTRFSLSQNQLIEIPKE--IGKIAKLIWL 324

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            + + QL E P ++ +L  L  L L QN L  IP+    +T LTEL LS N +  +P EL
Sbjct: 325 RIDQNQLTEVPRELSQLVNLTRLHLHQNQLTKIPKELGKVTKLTELSLSQNQLIEVPKEL 384

Query: 380 GLLEPSLQALRLDGNPLRSI 399
           G L  +L  LRL+ N L  +
Sbjct: 385 GQL-INLVELRLNQNQLTKV 403



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 143/300 (47%), Gaps = 42/300 (14%)

Query: 105 KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164
           K+   EA ++    LDL +  L+ +P EIG++T L  L L+GN L               
Sbjct: 11  KQRIAEAKRIAAPTLDLCSLKLTEVPKEIGQLTNLIALSLSGNQL--------------- 55

Query: 165 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
                + +P+             I   T L      LSL G  L+ +P EI +   +T+L
Sbjct: 56  -----TEVPKE------------IGKLTNLIA----LSLSGNQLTEVPKEIGKLANLTQL 94

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
            L +N + E+P E+   ASL  L L +N++ + P  I   L +L+ L L  N L ++P D
Sbjct: 95  RLHQNRLTEVPEEIGQLASLTELSLFQNQLTEVPKEI-GQLINLTELYLSQNQLMKIPKD 153

Query: 285 GFKDIPMLQILDLSYNIASLPENPP-FSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
             + +  L  L LS N   L E P     L +L ELYL + QL E P +  +L  L  L+
Sbjct: 154 -LERLISLTKLYLSQN--QLTEAPKELGKLINLMELYLSQNQLTEVPKEFGQLTSLIKLN 210

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           LSQN L  +P+    L SLTEL LS N +  +P ELG L  +L  L +D N L  I   I
Sbjct: 211 LSQNRLTGVPQELGELKSLTELHLSQNKLMEVPKELGKL-TNLTWLHIDQNQLTEIPEEI 269


>gi|350425451|ref|XP_003494125.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Bombus
           impatiens]
          Length = 602

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 136/433 (31%), Positives = 222/433 (51%), Gaps = 46/433 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N L  L  +L  +   L +L AS N L  +P  +G L ++  + L  N++ +
Sbjct: 202 LTSLDLSHNMLKELPPDL-TNMRALQKLNASYNQLEMLP-PLGELRKVETVMLQSNKLTT 259

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 118
            P  ISGC  L   ++ +N ++ +    L  + +L TL L +NQ++    E  +L  L +
Sbjct: 260 FPD-ISGCILLRVLHLADNNITEIDMSCLEGVGQLKTLTLGNNQIETIPEEIIKLVYLEI 318

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-----SRLP 173
            DLS+N L+ +P  IG +  L++  + GN ++ +R+ ++   T  +LK++R     + L 
Sbjct: 319 FDLSHNKLTLIPKYIGLLPNLKQFAIDGNDIQNVRTDIIRCGTSRILKHIRQGIKSTNLD 378

Query: 174 ENEDSEASTTKE---DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
             E   A T+     D  TM +     +K LSL G NL+ +P E+ E             
Sbjct: 379 VKEHVVADTSTNIYPDRYTMQS-----TKLLSLAGQNLTELPQEVLE------------- 420

Query: 231 IQELPPELSSC-ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
                   ++C A + T+ LSRNK+   PD  L  +  ++ LKL +N L  +P    +  
Sbjct: 421 --------NACKADVGTVDLSRNKLSILPDK-LCIIERIADLKLTSNQLTHIPEWIGEKY 471

Query: 290 PMLQILDLSYNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQILDLS N+  SLP N     L +LQEL +   + +E P  +  +  L IL  + N 
Sbjct: 472 KYLQILDLSRNLLQSLPIN--LGLLKYLQELNISFNRYKEIPESVYAINSLEILIANDNL 529

Query: 349 LQSIPE-GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
           +  I    F+ L  L  L+L++NNI  +PPELG L+ +L+ L L GN  +  R+ IL + 
Sbjct: 530 ITDIDVPSFQKLQKLAILNLANNNIGFVPPELGTLK-NLRNLSLSGNCFKQPRQAILAKS 588

Query: 408 TKAVLKYLKDKIP 420
           T+ +L YL+++IP
Sbjct: 589 TEEILAYLRNRIP 601



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 147/327 (44%), Gaps = 64/327 (19%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L  LDLS N+L  + P+I  +T L  L L  N L  L         PA +  L+      
Sbjct: 87  LQTLDLSCNTLKKIDPQIENLTELTTLYLHNNRLEDL---------PAEIGNLK------ 131

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                            +L++    L+L    L   P E ++  E+ +L+L  NSI+EL 
Sbjct: 132 -----------------KLNI----LNLSNNKLEKFPHEFYKLNELRELNLKNNSIKELD 170

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
           P +     L  L LS N + + P   +  L  L+ L L +N L+++P D   ++  LQ L
Sbjct: 171 PAVGDFVMLTYLDLSYNNLIELPIG-MGYLVRLTSLDLSHNMLKELPPD-LTNMRALQKL 228

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT-------DILRLQ----------- 337
           + SYN   L   PP   L  ++ + L+  +L   P         +L L            
Sbjct: 229 NASYN--QLEMLPPLGELRKVETVMLQSNKLTTFPDISGCILLRVLHLADNNITEIDMSC 286

Query: 338 -----QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
                QL+ L L  N +++IPE    L  L   DLS N ++ +P  +GLL P+L+   +D
Sbjct: 287 LEGVGQLKTLTLGNNQIETIPEEIIKLVYLEIFDLSHNKLTLIPKYIGLL-PNLKQFAID 345

Query: 393 GNPLRSIRRTILDRGTKAVLKYLKDKI 419
           GN ++++R  I+  GT  +LK+++  I
Sbjct: 346 GNDIQNVRTDIIRCGTSRILKHIRQGI 372



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 182/423 (43%), Gaps = 51/423 (12%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I + T LT L    N L  +P  IG+L +L  L+L  N++   P        L E  + N
Sbjct: 104 IENLTELTTLYLHNNRLEDLPAEIGNLKKLNILNLSNNKLEKFPHEFYKLNELRELNLKN 163

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N++  L   +G    L  LDL  N L E  +    L RL+ LDLS+N L  LPP++  M 
Sbjct: 164 NSIKELDPAVGDFVMLTYLDLSYNNLIELPIGMGYLVRLTSLDLSHNMLKELPPDLTNMR 223

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L+KL  + N L  L       P    L+ + + + +   S   TT  D I+    L V 
Sbjct: 224 ALQKLNASYNQLEML-------PPLGELRKVETVMLQ---SNKLTTFPD-ISGCILLRV- 271

Query: 198 SKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
              L L   N++ I     E  G++  L L  N I+ +P E+     L+   LS NK+  
Sbjct: 272 ---LHLADNNITEIDMSCLEGVGQLKTLTLGNNQIETIPEEIIKLVYLEIFDLSHNKLTL 328

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSD---------------GFK----DIPMLQILDL 297
            P  I   L +L    +D N ++ V +D               G K    D+    + D 
Sbjct: 329 IPKYI-GLLPNLKQFAIDGNDIQNVRTDIIRCGTSRILKHIRQGIKSTNLDVKEHVVADT 387

Query: 298 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR---LQQLRILDLSQNSLQSIPE 354
           S NI      P   ++   + L L    L E P ++L       +  +DLS+N L  +P+
Sbjct: 388 STNIY-----PDRYTMQSTKLLSLAGQNLTELPQEVLENACKADVGTVDLSRNKLSILPD 442

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
               +  + +L L+ N ++ +P  +G     LQ L L  N L+S+   +       +LKY
Sbjct: 443 KLCIIERIADLKLTSNQLTHIPEWIGEKYKYLQILDLSRNLLQSLPINL------GLLKY 496

Query: 415 LKD 417
           L++
Sbjct: 497 LQE 499



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 107/225 (47%), Gaps = 26/225 (11%)

Query: 165 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
           L   + R   ++++E S    ++I ++ R    S  L+L    L  +P+ +W        
Sbjct: 11  LAVFKKRTKNDDNAELS----EIIIISAR---KSGNLNLSSRGLFTVPNRVWNIN----- 58

Query: 225 DLSRNSIQELPPELSSCAS---------LQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
           DL+   I++L  EL              LQTL LS N +K   D  + +L+ L+ L L N
Sbjct: 59  DLTEEEIRDLHFELDYVQETERWWEQEPLQTLDLSCNTLKKI-DPQIENLTELTTLYLHN 117

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N L  +P++   ++  L IL+LS N +   P    F  L  L+EL L+   ++E    + 
Sbjct: 118 NRLEDLPAE-IGNLKKLNILNLSNNKLEKFPH--EFYKLNELRELNLKNNSIKELDPAVG 174

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
               L  LDLS N+L  +P G   L  LT LDLS N +  LPP+L
Sbjct: 175 DFVMLTYLDLSYNNLIELPIGMGYLVRLTSLDLSHNMLKELPPDL 219


>gi|418686505|ref|ZP_13247671.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410738938|gb|EKQ83670.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 469

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 132/402 (32%), Positives = 205/402 (50%), Gaps = 21/402 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+   KL  L    I     L  L  + N L  +P+ IG L  L  L+L+ N++ ++P 
Sbjct: 51  LDLSEQKLKTLPKE-IGQLQNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPK 109

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    + NN L+ LP E+G+L  L  L+L++NQL     E  QL+ L  L+L 
Sbjct: 110 EIGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQWLNLV 169

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++   + L+L+ N L TL   +        LK LR  L  N +   + 
Sbjct: 170 TNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEI------GQLKNLRE-LYLNTNQFTAF 222

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
            KE  I     L    ++L+L    L  +P+EI +   + +L LS N ++ L  E+    
Sbjct: 223 PKE--IGQLKNL----QQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQ 276

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +LQ L L+ N++K  P  I   L +L  L L+NN  + VP +    +  LQ+LDL YN  
Sbjct: 277 NLQVLDLNDNQLKTLPKEI-GQLKNLQVLDLNNNQFKTVPEE-IGQLKNLQVLDLGYNQF 334

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
            ++ E      L +LQ L+L   QL+    +I +L+ L++L L+ N L ++P   + L +
Sbjct: 335 KTVSE--EIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTLPNEIRQLKN 392

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L EL LS N +  L  E+G L+ +L+ L L  N L ++ + I
Sbjct: 393 LRELHLSYNQLKTLSAEIGQLK-NLKKLSLRDNQLTTLPKEI 433



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 147/307 (47%), Gaps = 28/307 (9%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS   L  LP EIG++  L+ L L  N L TL   +       +L+   ++L 
Sbjct: 46  LDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLA 105

Query: 174 E----------------NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 217
                            N +  A+  KE  I     L V    L L    L+ +P EI +
Sbjct: 106 TLPKEIGQLKNLQVLELNNNQLATLPKE--IGQLKNLQV----LELNNNQLATLPKEIGQ 159

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              +  L+L  N +  LP E+    + QTL+LS+N++   P  I   L +L  L L+ N 
Sbjct: 160 LKNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEI-GQLKNLRELYLNTNQ 218

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
               P +    +  LQ L+L  N + +LP       L +L+EL+L   QL+    +I +L
Sbjct: 219 FTAFPKE-IGQLKNLQQLNLYANQLKTLPN--EIGQLQNLRELHLSYNQLKTLSAEIGQL 275

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           Q L++LDL+ N L+++P+    L +L  LDL++N    +P E+G L+ +LQ L L  N  
Sbjct: 276 QNLQVLDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLK-NLQVLDLGYNQF 334

Query: 397 RSIRRTI 403
           +++   I
Sbjct: 335 KTVSEEI 341



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 115/213 (53%), Gaps = 6/213 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L    L  +P EI +   +  L+L+ N +  LP E+    +LQ L
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQVL 97

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            L+ N++   P  I   L +L  L+L+NN L  +P +    +  LQ+L+L+ N +A+LP+
Sbjct: 98  ELNNNQLATLPKEI-GQLKNLQVLELNNNQLATLPKE-IGQLKNLQVLELNNNQLATLPK 155

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +LQ L L   QL   P +I +LQ  + L LS+N L ++P+    L +L EL 
Sbjct: 156 --EIGQLKNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELY 213

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L+ N  +A P E+G L+ +LQ L L  N L+++
Sbjct: 214 LNTNQFTAFPKEIGQLK-NLQQLNLYANQLKTL 245


>gi|255078122|ref|XP_002502641.1| predicted protein [Micromonas sp. RCC299]
 gi|226517906|gb|ACO63899.1| predicted protein [Micromonas sp. RCC299]
          Length = 505

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 132/405 (32%), Positives = 199/405 (49%), Gaps = 44/405 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL++  N+LT++    I    +L  L    N L  +P  IG L+ L  LDL +N++ S
Sbjct: 121 LEKLNLYCNQLTIVPAE-IGQLALLERLNLDGNQLTSVPAEIGQLTSLTELDLGRNKLTS 179

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I    SL   ++  N L+++PAE+G+L+ L  LDL++NQL     E  QL  L  L
Sbjct: 180 LPTEIWQLTSLTCLHLQGNQLTSVPAEIGQLASLKGLDLYNNQLTSVPAEIGQLASLEKL 239

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L NN L+ +P EIG++T+L ++ L+ N L ++         PA +  L S         
Sbjct: 240 RLDNNQLASVPAEIGRLTSLTEVDLSFNRLTSV---------PAEIGQLTSL-------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                               EL L    L+ +P+EI +   + +L L  N +  +P E+ 
Sbjct: 283 -------------------TELHLHINKLTRVPAEIGQLASLVRLRLDNNQLTSVPAEIG 323

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              SL+ L L  N++   P  I   L+SL  L L  N L  VP++    +  L+ L L+ 
Sbjct: 324 QLTSLEWLGLGGNQLTSVPAEI-GQLASLERLLLYGNQLTSVPAE-IGQLTSLEWLGLNG 381

Query: 300 NI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           NI  S+P       L  L+ELYL   +L   P +I +L  L+ L L  N L  +P     
Sbjct: 382 NILTSVPAE--IGQLTSLKELYLHGNELTSVPAEIGQLTSLQRLYLGDNQLTRVPAEIGQ 439

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           LTSLT L L+ N +S+LP E+G L  S++ L L  N L S+   I
Sbjct: 440 LTSLTVLGLNSNQLSSLPAEIGQL-TSVERLDLRCNELTSVPAAI 483



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 129/364 (35%), Positives = 190/364 (52%), Gaps = 20/364 (5%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P  IG LS L  LDL+ +++ S+P+ I    SL +  +  N L+ +PAE+G+L+ L  L
Sbjct: 19  VPAEIGRLSALRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERL 78

Query: 98  DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            L  ++L     E  QL  L  L+L  N L+ +P EIG++T+L KL L  N L  + + +
Sbjct: 79  RLGGSKLTSVPAEIGQLTSLVELNLGGNRLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEI 138

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                 ALL+ L      N D    T+    I   T L+    EL L    L+++P+EIW
Sbjct: 139 ---GQLALLERL------NLDGNQLTSVPAEIGQLTSLT----ELDLGRNKLTSLPTEIW 185

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           +   +T L L  N +  +P E+   ASL+ L L  N++   P  I   L+SL  L+LDNN
Sbjct: 186 QLTSLTCLHLQGNQLTSVPAEIGQLASLKGLDLYNNQLTSVPAEI-GQLASLEKLRLDNN 244

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            L  VP++    +  L  +DLS+N + S+P       L  L EL+L   +L   P +I +
Sbjct: 245 QLASVPAE-IGRLTSLTEVDLSFNRLTSVPAE--IGQLTSLTELHLHINKLTRVPAEIGQ 301

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L  L  L L  N L S+P     LTSL  L L  N ++++P E+G L  SL+ L L GN 
Sbjct: 302 LASLVRLRLDNNQLTSVPAEIGQLTSLEWLGLGGNQLTSVPAEIGQL-ASLERLLLYGNQ 360

Query: 396 LRSI 399
           L S+
Sbjct: 361 LTSV 364



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 137/411 (33%), Positives = 208/411 (50%), Gaps = 18/411 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  ++LT +    I   T L +L    N L  +P  IG L+ L RL L  +++ S
Sbjct: 29  LRELDLYNSQLTSVPAE-IGQLTSLEKLNLYCNQLTIVPAEIGQLALLERLRLGGSKLTS 87

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    SL E  +G N L+++PAE+G+L+ L  L+L+ NQL     E  QL  L  L
Sbjct: 88  VPAEIGQLTSLVELNLGGNRLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERL 147

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL---PENE 176
           +L  N L+ +P EIG++T+L +L L  N L +L + +    +   L    ++L   P   
Sbjct: 148 NLDGNQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQGNQLTSVPAEI 207

Query: 177 DSEASTTKEDL-------ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
              AS    DL       +        + ++L L+   L+++P+EI     +T++DLS N
Sbjct: 208 GQLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDNNQLASVPAEIGRLTSLTEVDLSFN 267

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  +P E+    SL  L L  NK+   P  I   L+SL  L+LDNN L  VP++    +
Sbjct: 268 RLTSVPAEIGQLTSLTELHLHINKLTRVPAEI-GQLASLVRLRLDNNQLTSVPAE-IGQL 325

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L+ L L  N + S+P       L  L+ L L   QL   P +I +L  L  L L+ N 
Sbjct: 326 TSLEWLGLGGNQLTSVPAE--IGQLASLERLLLYGNQLTSVPAEIGQLTSLEWLGLNGNI 383

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L S+P     LTSL EL L  N ++++P E+G L  SLQ L L  N L  +
Sbjct: 384 LTSVPAEIGQLTSLKELYLHGNELTSVPAEIGQL-TSLQRLYLGDNQLTRV 433



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 117/326 (35%), Positives = 169/326 (51%), Gaps = 20/326 (6%)

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 134
           +G+    A+PAE+G+LS L  LDL+++QL     E  QL  L  L+L  N L+ +P EIG
Sbjct: 11  LGSWGPCAVPAEIGRLSALRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIG 70

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
           ++  L +L L G+ L ++         PA +  L S +  N      T+    I   T L
Sbjct: 71  QLALLERLRLGGSKLTSV---------PAEIGQLTSLVELNLGGNRLTSVPAEIGQLTSL 121

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
               ++L+L    L+ +P+EI +   + +L+L  N +  +P E+    SL  L L RNK+
Sbjct: 122 ----EKLNLYCNQLTIVPAEIGQLALLERLNLDGNQLTSVPAEIGQLTSLTELDLGRNKL 177

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 313
              P  I   L+SL+CL L  N L  VP++    +  L+ LDL  N + S+P       L
Sbjct: 178 TSLPTEIW-QLTSLTCLHLQGNQLTSVPAE-IGQLASLKGLDLYNNQLTSVPAE--IGQL 233

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
             L++L L   QL   P +I RL  L  +DLS N L S+P     LTSLTEL L  N ++
Sbjct: 234 ASLEKLRLDNNQLASVPAEIGRLTSLTEVDLSFNRLTSVPAEIGQLTSLTELHLHINKLT 293

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSI 399
            +P E+G L  SL  LRLD N L S+
Sbjct: 294 RVPAEIGQL-ASLVRLRLDNNQLTSV 318



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
           A+P+EI     + +LDL  + +  +P E+    SL+ L L  N++   P  I   L+ L 
Sbjct: 18  AVPAEIGRLSALRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEI-GQLALLE 76

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
            L+L  + L  VP++    +  L  L+L  N + S+P       L  L++L L   QL  
Sbjct: 77  RLRLGGSKLTSVPAE-IGQLTSLVELNLGGNRLTSVPAE--IGQLTSLEKLNLYCNQLTI 133

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
            P +I +L  L  L+L  N L S+P     LTSLTELDL  N +++LP E+  L  SL  
Sbjct: 134 VPAEIGQLALLERLNLDGNQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEIWQL-TSLTC 192

Query: 389 LRLDGNPLRSIRRTILDRGTKAVLKYL 415
           L L GN L S+   I   G  A LK L
Sbjct: 193 LHLQGNQLTSVPAEI---GQLASLKGL 216


>gi|242005578|ref|XP_002423641.1| leucine-rich repeat-containing protein, putative [Pediculus humanus
           corporis]
 gi|212506801|gb|EEB10903.1| leucine-rich repeat-containing protein, putative [Pediculus humanus
           corporis]
          Length = 595

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 132/409 (32%), Positives = 209/409 (51%), Gaps = 47/409 (11%)

Query: 19  IASWTMLTELIASKNLL--NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 76
           I S   L +L  S N +  +G+P+ +  + +L  + L  N++ S+P  + GC  L E ++
Sbjct: 213 ITSCQALRDLNLSNNKITSSGLPD-LFDMKKLEMIQLQHNKLTSLPC-LRGCSELKEIHL 270

Query: 77  GNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIG 134
           G N +  +  E L  LS L  ++L +N LKE   E +C L L  LDLSNN L  LP  + 
Sbjct: 271 GFNMIEEITVEELSTLSHLKVINLRNNHLKELPKEISCFLNLVRLDLSNNDLMELPNTLS 330

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE-----DSEASTTKEDL-I 188
            +  L  LL+ GN LR++R  +++G T  LL +L+  +P  E      S+    KE+   
Sbjct: 331 ILPHLEILLVEGNSLRSIRKDIIHGGTHRLLNHLKLTMPLAEAEKYLQSQYPCEKEEFPD 390

Query: 189 TMATRLSVTSKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNSIQELPP-ELSSCASL 244
             A R    SK L+L   +L  +   ++E   A   T +DLS+N + E+P      C +L
Sbjct: 391 RYAMR---CSKALNLSNKSLCNVSKAVFEEALAVPCTIVDLSKNKLLEIPSGTWLLCKTL 447

Query: 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL 304
             L +S N++++ P  I T L+ L  L + +N ++++P D F     L+ LD+S+N  + 
Sbjct: 448 NDLNISCNQLQEIPAEIKTCLN-LRYLNISHNNIKELP-DEFAACTRLRELDISFNSFNQ 505

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLT 363
           P                        P  + +   L IL L  N +  I  E   NL  LT
Sbjct: 506 P------------------------PMCVYKFPALEILLLGNNKISFIDAEELLNLKMLT 541

Query: 364 ELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVL 412
            LDL++NN++ +PP +G +   L+ L+L+GNPLR +R  I+ +GT+AVL
Sbjct: 542 HLDLTNNNLTEIPPLIGKM-TQLRTLKLEGNPLRVLRPAIIAKGTEAVL 589



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 28/311 (9%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L  LDLS+N L  +P +I  + +L  L+L  N L +L      G    L K +   L +N
Sbjct: 81  LKTLDLSSNYLKTIPVKIKILDSLVTLMLHHNNLNSLP-----GELGQLTKLVTLNLSQN 135

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSRNS 230
           E  E              LS   +   L+ +NLS+      P  +++   +  LD+S N 
Sbjct: 136 ELHE----------FPMELSGMKE---LKNINLSSNLCKIFPDFLYDLVLLNFLDISSNK 182

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           I+E+ P +     L  L LS N +   P  I TS  +L  L L NN +         D+ 
Sbjct: 183 IEEIKPGIGFLTRLVNLNLSHNNLSSIPLEI-TSCQALRDLNLSNNKITSSGLPDLFDMK 241

Query: 291 MLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSL 349
            L+++ L +N   L   P       L+E++L    + E   + L  L  L++++L  N L
Sbjct: 242 KLEMIQLQHN--KLTSLPCLRGCSELKEIHLGFNMIEEITVEELSTLSHLKVINLRNNHL 299

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTK 409
           + +P+      +L  LDLS+N++  LP  L +L P L+ L ++GN LRSIR+ I+  GT 
Sbjct: 300 KELPKEISCFLNLVRLDLSNNDLMELPNTLSIL-PHLEILLVEGNSLRSIRKDIIHGGTH 358

Query: 410 AVLKYLKDKIP 420
            +L +LK  +P
Sbjct: 359 RLLNHLKLTMP 369



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 6/166 (3%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D+  NKL  + +        L +L  S N L  +P  I +   L  L++  N I  +P 
Sbjct: 426 VDLSKNKLLEIPSGTWLLCKTLNDLNISCNQLQEIPAEIKTCLNLRYLNISHNNIKELPD 485

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVL 119
             + C  L E  +  N+ +  P  + K   L  L L +N++    ++A +L     L+ L
Sbjct: 486 EFAACTRLRELDISFNSFNQPPMCVYKFPALEILLLGNNKIS--FIDAEELLNLKMLTHL 543

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
           DL+NN+L+ +PP IGKMT LR L L GNPLR LR +++   T A+L
Sbjct: 544 DLTNNNLTEIPPLIGKMTQLRTLKLEGNPLRVLRPAIIAKGTEAVL 589



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 34/177 (19%)

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
           WE   +  LDLS N ++ +P ++    SL TL+L  N +   P   L  L+ L  L L  
Sbjct: 76  WEVEPLKTLDLSSNYLKTIPVKIKILDSLVTLMLHHNNLNSLPGE-LGQLTKLVTLNLSQ 134

Query: 276 NPLRQVPSD--GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
           N L + P +  G K+   L+ ++LS N+  +                         P  +
Sbjct: 135 NELHEFPMELSGMKE---LKNINLSSNLCKI------------------------FPDFL 167

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
             L  L  LD+S N ++ I  G   LT L  L+LS NN+S++P E+     S QALR
Sbjct: 168 YDLVLLNFLDISSNKIEEIKPGIGFLTRLVNLNLSHNNLSSIPLEIT----SCQALR 220



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            ++ L+ LDLS N L++IP   K L SL  L L  NN+++LP ELG L   L  L L  N
Sbjct: 77  EVEPLKTLDLSSNYLKTIPVKIKILDSLVTLMLHHNNLNSLPGELGQL-TKLVTLNLSQN 135

Query: 395 PLRSI 399
            L   
Sbjct: 136 ELHEF 140


>gi|418744888|ref|ZP_13301233.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794219|gb|EKR92129.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 481

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 131/387 (33%), Positives = 197/387 (50%), Gaps = 20/387 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  S N L  +P+ IG L  L +LDL  N++ ++P  I    +L +  + +
Sbjct: 31  IGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNS 90

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ L  E+G L  L TLDL  NQL     E   L+ L  LDL  N L+ LP EI  + 
Sbjct: 91  NQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQ 150

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L+ L L  N L TL   + N      L+ L++   + E ++ +T  E++  +       
Sbjct: 151 NLQTLDLGRNQLTTLPEEIGN------LQNLQTL--DLEGNQLATLPEEIGNLQNL---- 198

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            + L LEG  L+ +P EI +   + KL L  N +  LP E+    +LQ L L  N++   
Sbjct: 199 -QTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTLPKEVGKLQNLQELYLYNNRLTTL 257

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P  I   L +L  L L +N L  +P +  K +  LQ L L  N + +LP+     +L +L
Sbjct: 258 PKEI-EDLQNLKILSLGSNQLTTLPKEVGK-LQNLQELYLYNNRLTTLPK--EIGNLQNL 313

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           Q+L L   Q    P +I  LQ+L+ L L +N L ++PE   NL +L  LDL  N ++ LP
Sbjct: 314 QDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIWNLQNLKTLDLEGNQLATLP 373

Query: 377 PELGLLEPSLQALRLDGNPLRSIRRTI 403
            E+G L+ +LQ L L+GN L ++ + I
Sbjct: 374 EEIGNLQ-NLQKLDLEGNQLTTLPKEI 399



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 189/384 (49%), Gaps = 24/384 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L  L    I     L +L  S N L  +P+ IG L  L +L+L+ N++ +
Sbjct: 37  LRDLDLSSNQLMTLPKE-IGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTT 95

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +   I    +L    +G N L+ LP E+  L  L TLDL  NQL     E   L+ L  L
Sbjct: 96  LSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTL 155

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL  N L+ LP EIG +  L+ L L GN L TL   + N      L+ L++      D E
Sbjct: 156 DLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGN------LQNLQTL-----DLE 204

Query: 180 ASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
            +     L T+   +      K+L L    L+ +P E+ +   + +L L  N +  LP E
Sbjct: 205 GN----QLTTLPKEIGKLQNLKKLYLYNNRLTTLPKEVGKLQNLQELYLYNNRLTTLPKE 260

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           +    +L+ L L  N++   P  +   L +L  L L NN L  +P +   ++  LQ L+L
Sbjct: 261 IEDLQNLKILSLGSNQLTTLPKEV-GKLQNLQELYLYNNRLTTLPKE-IGNLQNLQDLNL 318

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
           + N   +LP+     +L  LQ+L L R QL   P +I  LQ L+ LDL  N L ++PE  
Sbjct: 319 NSNQFTTLPK--EIWNLQKLQKLSLGRNQLTTLPEEIWNLQNLKTLDLEGNQLATLPEEI 376

Query: 357 KNLTSLTELDLSDNNISALPPELG 380
            NL +L +LDL  N ++ LP E+G
Sbjct: 377 GNLQNLQKLDLEGNQLTTLPKEIG 400



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 138/397 (34%), Positives = 198/397 (49%), Gaps = 21/397 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL++  N+LT LS   I +   L  L   +N L  +PE I +L  L  LDL +N++ +
Sbjct: 83  LQKLNLNSNQLTTLSKE-IGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTT 141

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    +G N L+ LP E+G L  L TLDL  NQL     E   L+ L  L
Sbjct: 142 LPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTL 201

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL  N L+ LP EIGK+  L+KL L  N L TL   +        L    +RL     + 
Sbjct: 202 DLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTLPKEVGKLQNLQELYLYNNRL-----TT 256

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                EDL  +        K LSL    L+ +P E+ +   + +L L  N +  LP E+ 
Sbjct: 257 LPKEIEDLQNL--------KILSLGSNQLTTLPKEVGKLQNLQELYLYNNRLTTLPKEIG 308

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  +LQ L L+ N+    P  I  +L  L  L L  N L  +P + + ++  L+ LDL  
Sbjct: 309 NLQNLQDLNLNSNQFTTLPKEIW-NLQKLQKLSLGRNQLTTLPEEIW-NLQNLKTLDLEG 366

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +A+LPE     +L +LQ+L L   QL   P +I +LQ+L+ L L  N L ++P    N
Sbjct: 367 NQLATLPE--EIGNLQNLQKLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPIEIGN 424

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L  L  L L  N ++ LP E+G L+  L+ L L GNP
Sbjct: 425 LQKLQTLSLGHNQLTTLPKEIGNLQ-KLKMLDLGGNP 460



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 120/347 (34%), Positives = 175/347 (50%), Gaps = 33/347 (9%)

Query: 69  CSLAEFYMG-------NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 120
             +   Y+G       N+ L  LP E+GKL  L  LDL SNQL     E  +L+ L  LD
Sbjct: 5   TDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLD 64

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           LS+N L+ LP EIG++  L+KL L  N L TL   + N      L   R++L        
Sbjct: 65  LSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQL-------- 116

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
           +T  E++  +        + L L    L+ +P EIW    +  LDL RN +  LP E+ +
Sbjct: 117 TTLPEEIWNLQNL-----QTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIGN 171

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY- 299
             +LQTL L  N++   P+ I  +L +L  L L+ N L  +P    K+I  LQ L   Y 
Sbjct: 172 LQNLQTLDLEGNQLATLPEEI-GNLQNLQTLDLEGNQLTTLP----KEIGKLQNLKKLYL 226

Query: 300 ---NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
               + +LP+      L +LQELYL   +L   P +I  LQ L+IL L  N L ++P+  
Sbjct: 227 YNNRLTTLPK--EVGKLQNLQELYLYNNRLTTLPKEIEDLQNLKILSLGSNQLTTLPKEV 284

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             L +L EL L +N ++ LP E+G L+ +LQ L L+ N   ++ + I
Sbjct: 285 GKLQNLQELYLYNNRLTTLPKEIGNLQ-NLQDLNLNSNQFTTLPKEI 330


>gi|418752844|ref|ZP_13309101.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966796|gb|EKO34636.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 539

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 201/402 (50%), Gaps = 44/402 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+LT L    I +   L +L  + N    +P+ I +L +L +L L +N++ ++P 
Sbjct: 140 LDLSSNQLTTLPKE-IGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPE 198

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L E ++  N  + LP E+GKL KL  L L SN+      E  +L+ L  L+L 
Sbjct: 199 EIGKLQKLKELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLD 258

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N  + LP EIG +  L+KL L  N L TL         P  +  L+S            
Sbjct: 259 SNRFTTLPKEIGNLQKLQKLSLAHNQLTTL---------PKEIGKLQSL----------- 298

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                           + L+L G  L+ +P EI +   + +L L +N +  +P E+    
Sbjct: 299 ----------------QRLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIGKLQ 342

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           SLQ+L L  N++   P  I   L SL  L L  N L  +P + ++ +  LQ L LS+N +
Sbjct: 343 SLQSLTLWGNQLTTLPKEI-GKLQSLQELILGKNQLTTIPKEIWQ-LQYLQRLSLSFNQL 400

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
            ++P+      L +LQ+L+LR  QL   P +I  LQ+L+ LDL  N L ++PE    L +
Sbjct: 401 TAIPKE--IEKLQNLQKLHLRNNQLTTLPKEIGNLQKLQELDLGYNQLTALPEEIGKLQN 458

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L +L L++N ++ LP E+G L+  L+ L L+ N L ++ + I
Sbjct: 459 LKDLYLNNNKLTTLPKEIGKLQ-KLKDLYLNNNKLTTLPKEI 499



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 149/344 (43%), Gaps = 85/344 (24%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L+++ N+ T L    I +   L +L  + N L  +P+ IG L  L RL L  N++ ++P 
Sbjct: 255 LNLDSNRFTTLPKE-IGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWGNQLTTLPK 313

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I    SL E  +G N L+ +P E+GKL  L +L L  NQ                    
Sbjct: 314 EIGKLQSLQELILGKNQLTTIPKEIGKLQSLQSLTLWGNQ-------------------- 353

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
             L+ LP EIGK+ +L++L+L  N L T+   +        L+YL+              
Sbjct: 354 --LTTLPKEIGKLQSLQELILGKNQLTTIPKEIWQ------LQYLQ-------------- 391

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
                            LSL    L+AIP EI +   + KL L  N +  LP E+ +   
Sbjct: 392 ----------------RLSLSFNQLTAIPKEIEKLQNLQKLHLRNNQLTTLPKEIGNLQK 435

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 303
           LQ L L  N++   P+ I   L +L  L L+NN L  +P    K+I  LQ          
Sbjct: 436 LQELDLGYNQLTALPEEI-GKLQNLKDLYLNNNKLTTLP----KEIGKLQ---------- 480

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
                       L++LYL   +L   P +I +LQ+L+ L L+ N
Sbjct: 481 -----------KLKDLYLNNNKLTTLPKEIEKLQKLKNLHLADN 513



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 131/283 (46%), Gaps = 42/283 (14%)

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
           SN+ L  LP EIGK+  LR L L+ N L TL   + N      L+ L+            
Sbjct: 120 SNDPLWTLPKEIGKLQNLRDLDLSSNQLTTLPKEIGN------LQNLQ------------ 161

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
                             +L+L     + +P EIW   ++ KL L RN +  LP E+   
Sbjct: 162 ------------------DLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIGKL 203

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 300
             L+ L L  N+    P  I   L  L  L L +N    +P +  K +  LQ L+L  N 
Sbjct: 204 QKLKELHLDGNQFTTLPKEI-GKLQKLKELHLGSNRFTTLPKE-IKKLQNLQWLNLDSNR 261

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
             +LP+     +L  LQ+L L   QL   P +I +LQ L+ L L  N L ++P+    L 
Sbjct: 262 FTTLPKE--IGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWGNQLTTLPKEIGKLQ 319

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           SL EL L  N ++ +P E+G L+ SLQ+L L GN L ++ + I
Sbjct: 320 SLQELILGKNQLTTIPKEIGKLQ-SLQSLTLWGNQLTTLPKEI 361



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 83/153 (54%), Gaps = 2/153 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L + GN+LT L    I     L ELI  KN L  +P+ I  L  L RL L  N++ +
Sbjct: 344 LQSLTLWGNQLTTLPKE-IGKLQSLQELILGKNQLTTIPKEIWQLQYLQRLSLSFNQLTA 402

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           IP  I    +L + ++ NN L+ LP E+G L KL  LDL  NQL     E  +L+ L  L
Sbjct: 403 IPKEIEKLQNLQKLHLRNNQLTTLPKEIGNLQKLQELDLGYNQLTALPEEIGKLQNLKDL 462

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
            L+NN L+ LP EIGK+  L+ L L  N L TL
Sbjct: 463 YLNNNKLTTLPKEIGKLQKLKDLYLNNNKLTTL 495



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 25/155 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+LT +    I     L +L    N L  +P+ IG+L +L  LDL  N++ +
Sbjct: 390 LQRLSLSFNQLTAIPKE-IEKLQNLQKLHLRNNQLTTLPKEIGNLQKLQELDLGYNQLTA 448

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P  I    +L + Y+ NN L+ LP E+GKL KL   DL+                    
Sbjct: 449 LPEEIGKLQNLKDLYLNNNKLTTLPKEIGKLQKLK--DLY-------------------- 486

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
           L+NN L+ LP EI K+  L+ L L  NP   LRS 
Sbjct: 487 LNNNKLTTLPKEIEKLQKLKNLHLADNPF--LRSQ 519


>gi|255082904|ref|XP_002504438.1| predicted protein [Micromonas sp. RCC299]
 gi|226519706|gb|ACO65696.1| predicted protein [Micromonas sp. RCC299]
          Length = 487

 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 200/401 (49%), Gaps = 27/401 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ GN+LT +    I   T L  L  + N L  +P  IG L+ L  L L  N++ S+P+
Sbjct: 3   LNLSGNQLTSVPAE-IGQLTSLERLCLNDNQLTSVPAEIGRLASLTELYLEDNQLTSLPA 61

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I    SL    + +N L+++PAE+G+L+ L  L L  NQL     E  QL  L +L L 
Sbjct: 62  EIGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPAEIGQLTSLGLLGLD 121

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPENEDS 178
           NN LS +P EIG++T L+ L L  N L ++         PA +  L S    RL  N  +
Sbjct: 122 NNQLSSVPAEIGRLTALKGLDLQKNQLTSV---------PAEVGQLTSLEALRLQHNRLT 172

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                   L ++        ++L +    L+++P+EIW    + +L L  N +  LP E+
Sbjct: 173 SVPAEIGQLASL--------EKLYVADNQLTSMPAEIWRLTSLRELYLEDNRLTSLPAEI 224

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
              A L+ L L+ N++   P A +  L+SL  L L  N L  VP++  + + + ++    
Sbjct: 225 GQLALLKELWLNDNELTGLP-AEIGQLTSLRGLYLYGNQLTSVPAEIGQLMSLRELYLQG 283

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
             + S+P       L  L  L L   QL   P +I +L  L  LDLS N L S+P     
Sbjct: 284 NQLTSVP--AEIGQLTSLDVLNLSGNQLTSVPAEIGQLTFLGCLDLSYNYLTSLPAEIGQ 341

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L SL  LDL DN ++++P E+G L  SL+ L L+GN L S+
Sbjct: 342 LMSLRLLDLDDNRLASVPAEIGQLR-SLRELFLNGNLLTSV 381



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 127/383 (33%), Positives = 199/383 (51%), Gaps = 21/383 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     LTEL    N L  +P  IG L+ L  L L  N++ S+P+ I    SL   Y+G 
Sbjct: 40  IGRLASLTELYLEDNQLTSLPAEIGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGK 99

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+++PAE+G+L+ LG L L +NQL     E  +L  L  LDL  N L+ +P E+G++T
Sbjct: 100 NQLTSVPAEIGQLTSLGLLGLDNNQLSSVPAEIGRLTALKGLDLQKNQLTSVPAEVGQLT 159

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +L  L L  N L ++ + +  G   +L K   +      D++ ++   ++  + +     
Sbjct: 160 SLEALRLQHNRLTSVPAEI--GQLASLEKLYVA------DNQLTSMPAEIWRLTSL---- 207

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL LE   L+++P+EI +   + +L L+ N +  LP E+    SL+ L L  N++   
Sbjct: 208 -RELYLEDNRLTSLPAEIGQLALLKELWLNDNELTGLPAEIGQLTSLRGLYLYGNQLTSV 266

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P A +  L SL  L L  N L  VP++    +  L +L+LS N + S+P       L  L
Sbjct: 267 P-AEIGQLMSLRELYLQGNQLTSVPAE-IGQLTSLDVLNLSGNQLTSVP--AEIGQLTFL 322

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L L    L   P +I +L  LR+LDL  N L S+P     L SL EL L+ N ++++P
Sbjct: 323 GCLDLSYNYLTSLPAEIGQLMSLRLLDLDDNRLASVPAEIGQLRSLRELFLNGNLLTSVP 382

Query: 377 PELGLLEPSLQALRLDGNPLRSI 399
            E+G L  +++ L L+ N L S+
Sbjct: 383 AEIGQL--TVRELYLENNQLTSV 403



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 154/293 (52%), Gaps = 20/293 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +E N+LT L    I    +L EL  + N L G+P  IG L+ L  L L+ N++ S
Sbjct: 207 LRELYLEDNRLTSLPAE-IGQLALLKELWLNDNELTGLPAEIGQLTSLRGLYLYGNQLTS 265

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    SL E Y+  N L+++PAE+G+L+ L  L+L  NQL     E  QL  L  L
Sbjct: 266 VPAEIGQLMSLRELYLQGNQLTSVPAEIGQLTSLDVLNLSGNQLTSVPAEIGQLTFLGCL 325

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DLS N L+ LP EIG++ +LR L L  N L ++         PA +  LRS        E
Sbjct: 326 DLSYNYLTSLPAEIGQLMSLRLLDLDDNRLASV---------PAEIGQLRSL------RE 370

Query: 180 ASTTKEDLITMATRLS-VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                  L ++   +  +T +EL LE   L+++P+E+ +   + +L+LSRN +  +P E+
Sbjct: 371 LFLNGNLLTSVPAEIGQLTVRELYLENNQLTSVPAEVGQLAALEQLNLSRNKLTSVPAEI 430

Query: 239 SSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
               SL+ L+L+ N++   P  I  LTSL  L     +   +R++   G K +
Sbjct: 431 GLLTSLRWLLLNGNQLTSVPGEIGQLTSLRLLFLSSGEPAAIRKLREAGCKVV 483



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 148/284 (52%), Gaps = 21/284 (7%)

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSRLPENE 176
           VL+LS N L+ +P EIG++T+L +L L  N L ++ + +  G   +L + YL       E
Sbjct: 2   VLNLSGNQLTSVPAEIGQLTSLERLCLNDNQLTSVPAEI--GRLASLTELYL-------E 52

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
           D++ ++   ++  +A+      + L L    L+++P+EI +   +  L L +N +  +P 
Sbjct: 53  DNQLTSLPAEIGQLASL-----EWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPA 107

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    SL  L L  N++   P A +  L++L  L L  N L  VP++    +  L+ L 
Sbjct: 108 EIGQLTSLGLLGLDNNQLSSVP-AEIGRLTALKGLDLQKNQLTSVPAE-VGQLTSLEALR 165

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L +N + S+P       L  L++LY+   QL   P +I RL  LR L L  N L S+P  
Sbjct: 166 LQHNRLTSVP--AEIGQLASLEKLYVADNQLTSMPAEIWRLTSLRELYLEDNRLTSLPAE 223

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
              L  L EL L+DN ++ LP E+G L  SL+ L L GN L S+
Sbjct: 224 IGQLALLKELWLNDNELTGLPAEIGQL-TSLRGLYLYGNQLTSV 266



 Score = 41.6 bits (96), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 4/75 (5%)

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIR 400
           +L+LS N L S+P     LTSL  L L+DN ++++P E+G L  SL  L L+ N L S+ 
Sbjct: 2   VLNLSGNQLTSVPAEIGQLTSLERLCLNDNQLTSVPAEIGRL-ASLTELYLEDNQLTSLP 60

Query: 401 RTILDRGTKAVLKYL 415
             I   G  A L++L
Sbjct: 61  AEI---GQLASLEWL 72


>gi|255071327|ref|XP_002507745.1| predicted protein [Micromonas sp. RCC299]
 gi|226523020|gb|ACO69003.1| predicted protein [Micromonas sp. RCC299]
          Length = 419

 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 138/405 (34%), Positives = 206/405 (50%), Gaps = 44/405 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL++EGN+LT +    I   T LTEL   +N L  +P  IG L+ L  L+L  N++ S
Sbjct: 30  LRKLNLEGNQLTSMPAE-IGQLTSLTELSLGENQLRSVPAEIGQLTSLTELNLFDNQLTS 88

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I    SL +  +  N L+++PAEL +L+ L  L L +NQL     E  QL  L  L
Sbjct: 89  VPAEIGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLILDNNQLTSLPAEIGQLTSLKEL 148

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +  L+ LP EIG++T+LR++ L GN L +L         PA +  L S         
Sbjct: 149 GLHHIQLTSLPAEIGQLTSLREVHLYGNQLTSL---------PAEIGQLTSL-------- 191

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              ++L L G  L+++P+E+W+   + +LDL  N +  LP E+ 
Sbjct: 192 -------------------EKLYLYGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEIG 232

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              SL  L LS N++   P  I   L+SL+ L+L+ N L  +P++    +  L+ L+L+ 
Sbjct: 233 QLTSLWQLHLSGNQLTSVPAEI-GQLASLTELELNGNQLTSLPAE-IGQLTSLKELELNG 290

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N + SLP       L  L+ L LR   L   P +I +L  L  L+L  N L S+P     
Sbjct: 291 NQLTSLP--AEIGQLTSLRLLSLRDNLLTSVPAEIGQLTSLTELELHGNQLTSVPAEIGL 348

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           LTSL  L   DN +++LP E+G L  SL+ L L+ N L S+   I
Sbjct: 349 LTSLRGLGFKDNQLTSLPAEIGQL-TSLRGLGLECNLLTSVPAAI 392



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 130/371 (35%), Positives = 194/371 (52%), Gaps = 24/371 (6%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
            L+  +P  +G LS L +L+L  N++ S+P+ I    SL E  +G N L ++PAE+G+L+
Sbjct: 15  GLIGAVPAELGRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEIGQLT 74

Query: 93  KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
            L  L+L  NQL     E  QL  L  LDL  N L+ +P E+ ++T+L +L+L  N L +
Sbjct: 75  SLTELNLFDNQLTSVPAEIGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLILDNNQLTS 134

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS-VTS-KELSLEGMNLS 209
           L         PA +  L S        E       L ++   +  +TS +E+ L G  L+
Sbjct: 135 L---------PAEIGQLTSL------KELGLHHIQLTSLPAEIGQLTSLREVHLYGNQLT 179

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
           ++P+EI +   + KL L  N +  +P EL    SL+ L L  N++ + P  I   L+SL 
Sbjct: 180 SLPAEIGQLTSLEKLYLYGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEI-GQLTSLW 238

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
            L L  N L  VP++    +  L  L+L+ N + SLP       L  L+EL L   QL  
Sbjct: 239 QLHLSGNQLTSVPAE-IGQLASLTELELNGNQLTSLP--AEIGQLTSLKELELNGNQLTS 295

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
            P +I +L  LR+L L  N L S+P     LTSLTEL+L  N ++++P E+GLL  SL+ 
Sbjct: 296 LPAEIGQLTSLRLLSLRDNLLTSVPAEIGQLTSLTELELHGNQLTSVPAEIGLL-TSLRG 354

Query: 389 LRLDGNPLRSI 399
           L    N L S+
Sbjct: 355 LGFKDNQLTSL 365



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 1/115 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++ GN+LT L    I   T L  L    NLL  +P  IG L+ L  L+LH N++ S
Sbjct: 283 LKELELNGNQLTSLPAE-IGQLTSLRLLSLRDNLLTSVPAEIGQLTSLTELELHGNQLTS 341

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 115
           +P+ I    SL      +N L++LPAE+G+L+ L  L L  N L        +LR
Sbjct: 342 VPAEIGLLTSLRGLGFKDNQLTSLPAEIGQLTSLRGLGLECNLLTSVPAAIRELR 396


>gi|347971997|ref|XP_313783.5| AGAP004485-PA [Anopheles gambiae str. PEST]
 gi|333469123|gb|EAA44595.5| AGAP004485-PA [Anopheles gambiae str. PEST]
          Length = 595

 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 137/406 (33%), Positives = 187/406 (46%), Gaps = 50/406 (12%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
           RLDL ++ I  IP+S+  C SL EFY+  N +S+LP E+G L+ L TL L+ N L     
Sbjct: 118 RLDLSKSSITVIPASVKDCTSLVEFYLYGNKISSLPPEIGCLANLKTLALNENSLTSLPD 177

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
               L+ L VLDL +N LS +P  I K+ TL  L L  N +R +  +L N  +  +L   
Sbjct: 178 SLQNLKQLKVLDLRHNKLSDIPDVIYKLHTLTTLYLRFNRIRVVGDNLKNLSSLTMLS-- 235

Query: 169 RSRLPENEDSEASTTKEDLITMAT-RLS--------------VTSKELSLEGMNLSAIPS 213
              L EN+  E       L+ + T  LS              V    L L+  +L  IP 
Sbjct: 236 ---LRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPEAIGNCVNLTALDLQHNDLLDIPE 292

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
            I     + +L L  N +  +P  L +C  +    +  N I   PD +L SLS+L+ + L
Sbjct: 293 SIGNLSNLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITL 352

Query: 274 DNNPLRQVPSDG---FKDIPML-----QILDLSYNIAS---------LPENPPFSSLP-- 314
             N     PS G   F ++  +     QI  + Y I S         + EN   +SLP  
Sbjct: 353 SRNAFHSYPSGGPAQFTNVTSINLEHNQIDKIQYGIFSRAKGLTKLNMKEN-ALTSLPLD 411

Query: 315 -----HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
                 + EL      L + P DI  LQ L IL LS N L+ IP    NL  L  LDL +
Sbjct: 412 IGTWTQMVELNFGTNSLTKLPDDIHCLQNLEILILSNNLLKRIPNTIGNLKKLRVLDLEE 471

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           N + +LP E+GLL   LQ L L  N L ++ RTI   G    L YL
Sbjct: 472 NRLESLPSEIGLLH-DLQKLILQSNQLSALPRTI---GHLTNLTYL 513



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 184/412 (44%), Gaps = 52/412 (12%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
            N L+ +P+ I  L  L  L L  NRI  +  ++    SL    +  N +  LPA +G L
Sbjct: 192 HNKLSDIPDVIYKLHTLTTLYLRFNRIRVVGDNLKNLSSLTMLSLRENKIHELPAAIGHL 251

Query: 92  SKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
             L TLDL  N LK     +  C + L+ LDL +N L  +P  IG ++ L +L L  N L
Sbjct: 252 VNLTTLDLSHNHLKHLPEAIGNC-VNLTALDLQHNDLLDIPESIGNLSNLMRLGLRYNQL 310

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSE-ASTTKEDLITM-------------ATRLS 195
            ++  SL N           + + +  D   AS +    IT+             A   +
Sbjct: 311 TSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTN 370

Query: 196 VTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
           VTS  ++LE   +  I   I+  A  +TKL++  N++  LP ++ +   +  L    N +
Sbjct: 371 VTS--INLEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSL 428

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 313
              PD I   L +L  L L NN L+++P +   ++  L++LDL  N + SLP       L
Sbjct: 429 TKLPDDI-HCLQNLEILILSNNLLKRIP-NTIGNLKKLRVLDLEENRLESLPSE--IGLL 484

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN-- 371
             LQ+L L+  QL   P  I  L  L  L + +N+LQ +PE    L +L  L ++DN   
Sbjct: 485 HDLQKLILQSNQLSALPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESLYINDNPSL 544

Query: 372 ----------------------ISALPPELGLLEPSL--QALRLDGNPLRSI 399
                                 +SALPPE+    PSL  Q L+L   P R +
Sbjct: 545 IKLPYELALCQNLAIMSIENCPLSALPPEVVSGGPSLVIQYLKLHS-PYRQM 595



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 181/422 (42%), Gaps = 86/422 (20%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N L  L    I +   LT L    N L  +PE+IG+LS L+RL L  N++ S
Sbjct: 254 LTTLDLSHNHLKHLPE-AIGNCVNLTALDLQHNDLLDIPESIGNLSNLMRLGLRYNQLTS 312

Query: 61  IPSSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 119
           IP S+  C  + EF +  N +S LP   L  LS L T+ L  N    Y            
Sbjct: 313 IPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYP----------- 361

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
                  SG P +   +T++                                    E ++
Sbjct: 362 -------SGGPAQFTNVTSINL----------------------------------EHNQ 380

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
               +  + + A  L+    +L+++   L+++P +I    ++ +L+   NS+ +LP ++ 
Sbjct: 381 IDKIQYGIFSRAKGLT----KLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDIH 436

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+ LILS N +K  P+ I  +L  L  L L+ N L  +PS+               
Sbjct: 437 CLQNLEILILSNNLLKRIPNTI-GNLKKLRVLDLEENRLESLPSE--------------- 480

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                        L  LQ+L L+  QL   P  I  L  L  L + +N+LQ +PE    L
Sbjct: 481 ----------IGLLHDLQKLILQSNQLSALPRTIGHLTNLTYLSVGENNLQFLPEEIGTL 530

Query: 360 TSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
            +L  L ++DN ++  LP EL L + +L  + ++  PL ++   ++  G   V++YLK  
Sbjct: 531 ENLESLYINDNPSLIKLPYELALCQ-NLAIMSIENCPLSALPPEVVSGGPSLVIQYLKLH 589

Query: 419 IP 420
            P
Sbjct: 590 SP 591



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           + ++ LDLS++S+  IP   K+ TSL E  L  N IS+LPPE+G L  +L+ L L+ N L
Sbjct: 114 ENIQRLDLSKSSITVIPASVKDCTSLVEFYLYGNKISSLPPEIGCL-ANLKTLALNENSL 172

Query: 397 RSI 399
            S+
Sbjct: 173 TSL 175


>gi|158335195|ref|YP_001516367.1| hypothetical protein AM1_2038 [Acaryochloris marina MBIC11017]
 gi|158305436|gb|ABW27053.1| leucine-rich repeat containing outermembrane protein, putative
           [Acaryochloris marina MBIC11017]
          Length = 659

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 144/424 (33%), Positives = 217/424 (51%), Gaps = 44/424 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQNR 57
           +  LD+  N+LT    NL +S T L EL     S N L  +P  I  L++L RLDL +N+
Sbjct: 132 LQSLDLTANQLT----NLPSSVTQLKELQTLDLSNNWLKSLPPEIAQLNKLRRLDLFRNQ 187

Query: 58  ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 116
           +  +P  I    +L    +G+N LS+LPA + KL+ L  LDL +  LK    E  QL +L
Sbjct: 188 LSGLPPEIIKLNNLQTLGLGHNTLSSLPATIAKLTNLKKLDLRATSLKRLPPEILQLTKL 247

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR--SRLPE 174
             LDLS+N LS LPPEI ++  L+ L         L+ + ++ P PA L  L     L  
Sbjct: 248 QELDLSDNKLSSLPPEIAQLVNLQSL--------RLKFTQLSHP-PAELSQLTHLQELDL 298

Query: 175 NEDSEASTTKE------------------DLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
           + +S +S  +E                  +L T+ T+L+ T + L L    L+++P EI 
Sbjct: 299 SGNSLSSLPREMAKLKKLQKLDLSYNSLRNLPTVITQLT-TLRSLDLRSTQLNSLPPEIA 357

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           +   +  LDL  N +  LP E+ +   L+ L LS+ ++ + P AI+  L  L  L    N
Sbjct: 358 QLINLQSLDLYDNPLTHLPQEIGTLTHLKKLNLSKTQLTNLPPAIM-KLKRLQSLDFSGN 416

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            L  +P +    I  L+ L+LS+N ++ LP +     L +LQEL LR  +L   P +I +
Sbjct: 417 QLSSLPIE-ITQIISLKELNLSFNQLSKLPAD--IGQLNNLQELDLRENKLDSLPKEIGQ 473

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L  L+ L L  N L ++P     L +L  L +  N +S+LPPE+G L  SL++L L  N 
Sbjct: 474 LNNLKSLVLRFNQLNTLPPDIGQLKNLKSLSIHGNTLSSLPPEIGKLS-SLKSLILRSNR 532

Query: 396 LRSI 399
           L S+
Sbjct: 533 LSSL 536



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 138/418 (33%), Positives = 220/418 (52%), Gaps = 23/418 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N+L  L    +   T L++L    N L+ +P  +  L  L  LDL  N++ +
Sbjct: 86  LTTLDLCSNRLNRLPAE-VTQLTTLSKLALCFNQLSHLPMEMAQLKHLQSLDLTANQLTN 144

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +PSS++    L    + NN L +LP E+ +L+KL  LDL  NQL     E  +L  L  L
Sbjct: 145 LPSSVTQLKELQTLDLSNNWLKSLPPEIAQLNKLRRLDLFRNQLSGLPPEIIKLNNLQTL 204

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +N+LS LP  I K+T L+KL L    L+ L         P +L+  + +  +  D++
Sbjct: 205 GLGHNTLSSLPATIAKLTNLKKLDLRATSLKRL--------PPEILQLTKLQELDLSDNK 256

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            S+   ++  +     V  + L L+   LS  P+E+ +   + +LDLS NS+  LP E++
Sbjct: 257 LSSLPPEIAQL-----VNLQSLRLKFTQLSHPPAELSQLTHLQELDLSGNSLSSLPREMA 311

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L LS N +++ P  ++T L++L  L L +  L  +P +    +  LQ LDL  
Sbjct: 312 KLKKLQKLDLSYNSLRNLP-TVITQLTTLRSLDLRSTQLNSLPPE-IAQLINLQSLDLYD 369

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +  LP+     +L HL++L L + QL   P  I++L++L+ LD S N L S+P     
Sbjct: 370 NPLTHLPQE--IGTLTHLKKLNLSKTQLTNLPPAIMKLKRLQSLDFSGNQLSSLPIEITQ 427

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI--LDRGTKAVLKY 414
           + SL EL+LS N +S LP ++G L  +LQ L L  N L S+ + I  L+     VL++
Sbjct: 428 IISLKELNLSFNQLSKLPADIGQLN-NLQELDLRENKLDSLPKEIGQLNNLKSLVLRF 484



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 204/400 (51%), Gaps = 19/400 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  NKL+ L    IA    L  L      L+  P  +  L+ L  LDL  N + S
Sbjct: 247 LQELDLSDNKLSSLPPE-IAQLVNLQSLRLKFTQLSHPPAELSQLTHLQELDLSGNSLSS 305

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  ++    L +  +  N+L  LP  + +L+ L +LDL S QL     E  QL  L  L
Sbjct: 306 LPREMAKLKKLQKLDLSYNSLRNLPTVITQLTTLRSLDLRSTQLNSLPPEIAQLINLQSL 365

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL +N L+ LP EIG +T L+KL L+       ++ L N P PA++K  R +  +   ++
Sbjct: 366 DLYDNPLTHLPQEIGTLTHLKKLNLS-------KTQLTNLP-PAIMKLKRLQSLDFSGNQ 417

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            S+   ++  +     ++ KEL+L    LS +P++I +   + +LDL  N +  LP E+ 
Sbjct: 418 LSSLPIEITQI-----ISLKELNLSFNQLSKLPADIGQLNNLQELDLRENKLDSLPKEIG 472

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L++L+L  N++   P  I   L +L  L +  N L  +P +  K   +  ++  S 
Sbjct: 473 QLNNLKSLVLRFNQLNTLPPDI-GQLKNLKSLSIHGNTLSSLPPEIGKLSSLKSLILRSN 531

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            ++SLP  P    L +L  L L   QL   P ++ +LQ LR LDL  N L+++P     L
Sbjct: 532 RLSSLP--PEIGKLHNLNSLNLVENQLSSLPIEMRKLQNLRELDLRNNRLRNLPLEMGQL 589

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            SL  +DLSDN +S LP E+G L  +L  L LD N L ++
Sbjct: 590 KSLGLVDLSDNQLSNLPKEMGQLY-NLTVLSLDRNQLSNL 628



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 140/292 (47%), Gaps = 34/292 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N LT L    I + T L +L  SK  L  +P  I  L RL  LD   N++ S
Sbjct: 362 LQSLDLYDNPLTHLPQE-IGTLTHLKKLNLSKTQLTNLPPAIMKLKRLQSLDFSGNQLSS 420

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I+   SL E  +  N LS LPA++G+L+ L  LDL  N+L     E  QL  L  L
Sbjct: 421 LPIEITQIISLKELNLSFNQLSKLPADIGQLNNLQELDLRENKLDSLPKEIGQLNNLKSL 480

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N L+ LPP+IG++  L+ L + GN L +L       P    L  L+S         
Sbjct: 481 VLRFNQLNTLPPDIGQLKNLKSLSIHGNTLSSL------PPEIGKLSSLKS--------- 525

Query: 180 ASTTKEDLITMATRLSVTSKELS-LEGMN--------LSAIPSEIWEAGEITKLDLSRNS 230
                  LI  + RLS    E+  L  +N        LS++P E+ +   + +LDL  N 
Sbjct: 526 -------LILRSNRLSSLPPEIGKLHNLNSLNLVENQLSSLPIEMRKLQNLRELDLRNNR 578

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           ++ LP E+    SL  + LS N++ + P   +  L +L+ L LD N L  +P
Sbjct: 579 LRNLPLEMGQLKSLGLVDLSDNQLSNLPKE-MGQLYNLTVLSLDRNQLSNLP 629



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 96/288 (33%), Positives = 137/288 (47%), Gaps = 42/288 (14%)

Query: 105 KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164
           +    +A   + S LDL   SL+ LP EIG++  L  L L  N L               
Sbjct: 29  QHRIQQALATQASQLDLQGLSLTQLPLEIGQLKHLEVLNLRDNQL--------------- 73

Query: 165 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
                SRLP             LI + T        L L    L+ +P+E+ +   ++KL
Sbjct: 74  -----SRLPPEIG--------QLIHLTT--------LDLCSNRLNRLPAEVTQLTTLSKL 112

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
            L  N +  LP E++    LQ+L L+ N++ + P ++ T L  L  L L NN L+ +P +
Sbjct: 113 ALCFNQLSHLPMEMAQLKHLQSLDLTANQLTNLPSSV-TQLKELQTLDLSNNWLKSLPPE 171

Query: 285 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
               +  L+ LDL  N ++ LP  P    L +LQ L L    L   P  I +L  L+ LD
Sbjct: 172 -IAQLNKLRRLDLFRNQLSGLP--PEIIKLNNLQTLGLGHNTLSSLPATIAKLTNLKKLD 228

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           L   SL+ +P     LT L ELDLSDN +S+LPPE+  L  +LQ+LRL
Sbjct: 229 LRATSLKRLPPEILQLTKLQELDLSDNKLSSLPPEIAQLV-NLQSLRL 275



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 104/210 (49%), Gaps = 27/210 (12%)

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L+  + +L L+G++L+ +P EI +   +  L+L  N +  LPPE+     L TL L  N+
Sbjct: 36  LATQASQLDLQGLSLTQLPLEIGQLKHLEVLNLRDNQLSRLPPEIGQLIHLTTLDLCSNR 95

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 313
           +   P A +T L++LS L L  N L  +P +                          + L
Sbjct: 96  LNRLP-AEVTQLTTLSKLALCFNQLSHLPME-------------------------MAQL 129

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
            HLQ L L   QL   P+ + +L++L+ LDLS N L+S+P     L  L  LDL  N +S
Sbjct: 130 KHLQSLDLTANQLTNLPSSVTQLKELQTLDLSNNWLKSLPPEIAQLNKLRRLDLFRNQLS 189

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            LPPE+  L  +LQ L L  N L S+  TI
Sbjct: 190 GLPPEIIKLN-NLQTLGLGHNTLSSLPATI 218



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 79/150 (52%), Gaps = 2/150 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L + GN L+ L    I   + L  LI   N L+ +P  IG L  L  L+L +N++ S
Sbjct: 500 LKSLSIHGNTLSSLPPE-IGKLSSLKSLILRSNRLSSLPPEIGKLHNLNSLNLVENQLSS 558

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  +    +L E  + NN L  LP E+G+L  LG +DL  NQL     E  QL  L+VL
Sbjct: 559 LPIEMRKLQNLRELDLRNNRLRNLPLEMGQLKSLGLVDLSDNQLSNLPKEMGQLYNLTVL 618

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
            L  N LS LP EI ++    K+ + GNPL
Sbjct: 619 SLDRNQLSNLPIEIEQLWPSTKITVEGNPL 648



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 103/226 (45%), Gaps = 41/226 (18%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  NKL  L    I     L  L+   N LN +P  IG L  L  L +H N + S
Sbjct: 454 LQELDLRENKLDSLPKE-IGQLNNLKSLVLRFNQLNTLPPDIGQLKNLKSLSIHGNTLSS 512

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    SL    + +N LS+LP E+GKL  L +L+L  NQL    +E  +L+ L  L
Sbjct: 513 LPPEIGKLSSLKSLILRSNRLSSLPPEIGKLHNLNSLNLVENQLSSLPIEMRKLQNLREL 572

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL NN L  LP E+G++ +L  + L+ N L                    S LP+     
Sbjct: 573 DLRNNRLRNLPLEMGQLKSLGLVDLSDNQL--------------------SNLPKE---- 608

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI---WEAGEIT 222
                     M    ++T   LSL+   LS +P EI   W + +IT
Sbjct: 609 ----------MGQLYNLTV--LSLDRNQLSNLPIEIEQLWPSTKIT 642


>gi|380014404|ref|XP_003691222.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Apis
           florea]
          Length = 602

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 129/412 (31%), Positives = 210/412 (50%), Gaps = 49/412 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L +L AS N L  +P  +G L ++  + L  N++ + P  +SGC  L   ++ +N ++ +
Sbjct: 225 LQKLNASYNDLEMLP-PLGELRKVETVMLQTNKLTTFPD-MSGCIQLRILHLADNNITEI 282

Query: 85  PAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKL 142
               L  + +L TL L +NQ++    E  +L  L + DLS+N ++ +P  IG M  +++ 
Sbjct: 283 DMSCLEGVGQLKTLTLGNNQIESIPEEIIKLVYLEIFDLSHNKITLIPEHIGLMPNIKQF 342

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NEDSEASTT-------KEDLITMATRL 194
           ++ GN ++ +R  ++   T  +LK+++  L   N DS+   T         D  TM +  
Sbjct: 343 IIDGNDVKNIRMDIIRCGTSRILKHIQQGLKSTNLDSKRHVTLNASTNIYPDRYTMHS-- 400

Query: 195 SVTSKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNSIQELPPELSSCASLQTLILSR 251
              +K LSL G NL+ IP E+ E     ++  +DLSRN    LP EL             
Sbjct: 401 ---TKLLSLAGQNLTEIPQEVLENACKADVGTVDLSRNKFSTLPDELH------------ 445

Query: 252 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPF 310
                    I+T ++ L   KL +N L  +P    +    LQILDLS N + SLP N   
Sbjct: 446 ---------IITKVADL---KLTSNQLTHIPEWICEKYKYLQILDLSKNCLESLPFN--I 491

Query: 311 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-GFKNLTSLTELDLSD 369
             L +LQEL +   + +E P  I  +  L IL  + N + +I     + L  L  L+L++
Sbjct: 492 GLLKYLQELNISFNRYKEIPESIYDVDSLEILIANDNLITNIDILSLQKLQKLVILNLAN 551

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
           NNI  +PPELG L+ +L+ L L GN  +  R+ IL + T+ +L YL+++IP+
Sbjct: 552 NNIGYIPPELGNLK-NLRNLSLSGNCFKQPRQAILMKSTEEILAYLRNRIPQ 602



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 151/366 (41%), Gaps = 86/366 (23%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL  N + +I S +     L   Y+ NN L  LP E+G L K                 
Sbjct: 90  LDLSCNSLKAIDSKVECLTELTTLYLHNNLLEDLPVEIGNLKK----------------- 132

Query: 111 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 170
                L +L+LSNN L  LP E  K+T L +L L  N ++ L         PA   ++  
Sbjct: 133 -----LEILNLSNNKLEKLPYEFYKLTELHQLSLKNNNIKQL--------DPAFGDFI-- 177

Query: 171 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
                              M T L ++         NL  +P  +     +  LDL+ N 
Sbjct: 178 -------------------MLTYLDLSYN-------NLIELPIGMGYLVRLVSLDLNHNM 211

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           ++ELPP+L++  +LQ L  S N ++  P   L  L  +  + L  N L   P        
Sbjct: 212 LKELPPDLTNMRALQKLNASYNDLEMLPP--LGELRKVETVMLQTNKLTTFPD--MSGCI 267

Query: 291 MLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
            L+IL L+ N  +  +      +  L+ L L   Q+   P +I++L  L I DLS N + 
Sbjct: 268 QLRILHLADNNITEIDMSCLEGVGQLKTLTLGNNQIESIPEEIIKLVYLEIFDLSHNKIT 327

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKA 410
            IPE                        +GL+ P+++   +DGN +++IR  I+  GT  
Sbjct: 328 LIPE-----------------------HIGLM-PNIKQFIIDGNDVKNIRMDIIRCGTSR 363

Query: 411 VLKYLK 416
           +LK+++
Sbjct: 364 ILKHIQ 369



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 21/174 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L +  N+LT +   +   +  L  L  SKN L  +P  IG L  L  L++  NR   
Sbjct: 450 VADLKLTSNQLTHIPEWICEKYKYLQILDLSKNCLESLPFNIGLLKYLQELNISFNRYKE 509

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IP SI    SL E  + N+ L         ++ +  L L   Q           +L +L+
Sbjct: 510 IPESIYDVDSL-EILIANDNL---------ITNIDILSLQKLQ-----------KLVILN 548

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           L+NN++  +PPE+G +  LR L L+GN  +  R +++   T  +L YLR+R+P+
Sbjct: 549 LANNNIGYIPPELGNLKNLRNLSLSGNCFKQPRQAILMKSTEEILAYLRNRIPQ 602



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 3/162 (1%)

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
           WE   +  LDLS NS++ +  ++     L TL L  N ++D P  I  +L  L  L L N
Sbjct: 82  WEQEPLKMLDLSCNSLKAIDSKVECLTELTTLYLHNNLLEDLPVEI-GNLKKLEILNLSN 140

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
           N L ++P + +K   + Q+   + NI  L  +P F     L  L L    L E P  +  
Sbjct: 141 NKLEKLPYEFYKLTELHQLSLKNNNIKQL--DPAFGDFIMLTYLDLSYNNLIELPIGMGY 198

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           L +L  LDL+ N L+ +P    N+ +L +L+ S N++  LPP
Sbjct: 199 LVRLVSLDLNHNMLKELPPDLTNMRALQKLNASYNDLEMLPP 240


>gi|157106660|ref|XP_001649425.1| shoc2 [Aedes aegypti]
 gi|108868804|gb|EAT33029.1| AAEL014718-PA [Aedes aegypti]
          Length = 527

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 138/406 (33%), Positives = 186/406 (45%), Gaps = 50/406 (12%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
           RLDL ++ I  IP S+  C SL EFY+  N +S+LP E+G LS L TL L+ N L     
Sbjct: 50  RLDLSKSSITIIPPSVKDCTSLVEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSLPD 109

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
               L+ L VLDL +N LS +P  I K+ TL  L L  N ++ +  +L N     +L   
Sbjct: 110 SLQNLKQLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKVVGDNLKNLSHLTMLS-- 167

Query: 169 RSRLPENEDSEASTTKEDLITMAT-RLS--------------VTSKELSLEGMNLSAIPS 213
              L EN+  E  +    L+ + T  LS              V    L L+  +L  IP 
Sbjct: 168 ---LRENKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNLTALDLQHNDLLDIPE 224

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
            I     + +L L  N +  +P  L +C  +    +  N I   PD +L SLS+L+ + L
Sbjct: 225 TIGNLANLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITL 284

Query: 274 DNNPLRQVPSDG---FKDIPML-----QILDLSYNIAS---------LPENPPFSSLP-- 314
             N     PS G   F ++  +     QI  + Y I S         + EN   +SLP  
Sbjct: 285 SRNAFHSYPSGGPAQFTNVTSINMEHNQIDKIQYGIFSRAKGLTKLNMKEN-ALTSLPLD 343

Query: 315 -----HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
                 + EL      L + P DI  LQ L IL LS N L+ IP    NL  L  LDL +
Sbjct: 344 IGTWTQMVELNFGTNSLTKLPDDIHCLQNLEILILSNNVLKRIPNTIGNLKKLRVLDLEE 403

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           N + +LP E+GLL   LQ L L  N L S+ RTI   G    L YL
Sbjct: 404 NRLESLPSEIGLLH-DLQKLILQSNQLTSLPRTI---GHLTNLTYL 445



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 181/422 (42%), Gaps = 86/422 (20%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N L  L    I +   LT L    N L  +PETIG+L+ L+RL L  N++ S
Sbjct: 186 LTTLDLSHNHLKHLPAE-IGNCVNLTALDLQHNDLLDIPETIGNLANLMRLGLRYNQLTS 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 119
           IP S+  C  + EF +  N +S LP   L  LS L T+ L  N    Y            
Sbjct: 245 IPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYP----------- 293

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
                  SG P +   +T++                                    E ++
Sbjct: 294 -------SGGPAQFTNVTSINM----------------------------------EHNQ 312

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
               +  + + A  L+    +L+++   L+++P +I    ++ +L+   NS+ +LP ++ 
Sbjct: 313 IDKIQYGIFSRAKGLT----KLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDIH 368

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+ LILS N +K  P+ I  +L  L  L L+ N L  +PS+               
Sbjct: 369 CLQNLEILILSNNVLKRIPNTI-GNLKKLRVLDLEENRLESLPSE--------------- 412

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                        L  LQ+L L+  QL   P  I  L  L  L + +N+LQ +PE    L
Sbjct: 413 ----------IGLLHDLQKLILQSNQLTSLPRTIGHLTNLTYLSVGENNLQFLPEEIGTL 462

Query: 360 TSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
            +L  L ++DN ++  LP EL L + +L  + ++  PL ++   ++  G   V++YLK  
Sbjct: 463 ENLESLYINDNASLVKLPYELALCQ-NLAIMSIENCPLSALPPEVVSGGPSLVIQYLKLH 521

Query: 419 IP 420
            P
Sbjct: 522 SP 523


>gi|254424572|ref|ZP_05038290.1| Miro-like protein [Synechococcus sp. PCC 7335]
 gi|196192061|gb|EDX87025.1| Miro-like protein [Synechococcus sp. PCC 7335]
          Length = 1260

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 138/405 (34%), Positives = 203/405 (50%), Gaps = 21/405 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N+L+ L   ++     LT L  S N L+ +PE +G L  L  LDL  N++ +
Sbjct: 210 LTSLDLSFNQLSTLPE-VVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLST 268

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  +    SL   Y+ +N LS LP  +G+L  L +LDL SNQL        QL+ L+ L
Sbjct: 269 LPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSL 328

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L +N LS LP  +G++ +L  L L+ N L TL         P  +  L+S    N  S 
Sbjct: 329 NLRSNQLSTLPEVVGQLQSLTSLYLSSNQLSTL---------PEAVGQLQSLTSLNLSSN 379

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             +T  +++     L+     L L    LS +P  + +   +T L L  N +  LP  + 
Sbjct: 380 QLSTLPEVVGQLQSLT----SLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEAVG 435

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              SL +L LS N++   P+ ++  L SL+ L L +N L  +P +    +  L  LDLS 
Sbjct: 436 QLQSLTSLDLSSNQLSTLPE-VVGQLQSLTSLNLRSNQLSTLP-EAVGQLQSLTSLDLSS 493

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +++LPE      L  L  L LR  QL   P  + +LQ L  LDLS N L ++PE    
Sbjct: 494 NQLSTLPE--VVGQLQSLTSLDLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQ 551

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L SLT L L  N +S LP  +G L+ SL +L L  N L  + R I
Sbjct: 552 LQSLTSLYLRSNQLSTLPEVIGQLQ-SLTSLDLSDNQLSELPRQI 595



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 136/405 (33%), Positives = 205/405 (50%), Gaps = 21/405 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L++  N+L+ L   ++     LT L  S N L+ +PE +G L  L  LDL  N++ +
Sbjct: 164 LTSLNLRSNQLSTLPE-VVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLSFNQLST 222

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  +    SL    + +N LS LP  +G+L  L +LDL SNQL        QL+ L+ L
Sbjct: 223 LPEVVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSL 282

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +N LS LP  +G++ +L  L L+ N L TL         P ++  L+S    N  S 
Sbjct: 283 YLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTL---------PEVVGQLQSLTSLNLRSN 333

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             +T  +++     L+     L L    LS +P  + +   +T L+LS N +  LP  + 
Sbjct: 334 QLSTLPEVVGQLQSLT----SLYLSSNQLSTLPEAVGQLQSLTSLNLSSNQLSTLPEVVG 389

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              SL +L LS N++   P+ ++  L SL+ L L +N L  +P +    +  L  LDLS 
Sbjct: 390 QLQSLTSLDLSSNQLSTLPE-VVGQLQSLTSLYLRSNQLSTLP-EAVGQLQSLTSLDLSS 447

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +++LPE      L  L  L LR  QL   P  + +LQ L  LDLS N L ++PE    
Sbjct: 448 NQLSTLPE--VVGQLQSLTSLNLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQ 505

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L SLT LDL  N +S LP  +G L+ SL +L L  N L ++   +
Sbjct: 506 LQSLTSLDLRSNQLSTLPEVVGQLQ-SLTSLDLSSNQLSTLPEVV 549



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 131/393 (33%), Positives = 196/393 (49%), Gaps = 20/393 (5%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           GN L  L +  I   T L  L  + N    +PE +G L +L  L+L  N++ ++P  +  
Sbjct: 57  GNNLQTLPDE-IGRLTELRSLFLAYNQFEEIPEVVGRLRKLRSLNLSSNQLSTLPEVVGQ 115

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 127
             SL   Y+ +N LS LP  +G+L  L +LDL SNQL        Q  L+ L+L +N LS
Sbjct: 116 LQSLTSLYLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQQSLTSLNLRSNQLS 175

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            LP  +G++ +L  L L+ N L TL         P ++  L+S    +      +T  ++
Sbjct: 176 TLPEVVGQLQSLTSLDLSSNQLSTL---------PEVVGQLQSLTSLDLSFNQLSTLPEV 226

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +     L+     L+L    LS +P  + +   +T LDLS N +  LP  +    SL +L
Sbjct: 227 VGQLQSLT----SLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSL 282

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            L  N++   P+A+   L SL+ L L +N L  +P +    +  L  L+L  N +++LPE
Sbjct: 283 YLRSNQLSTLPEAV-GQLQSLTSLDLSSNQLSTLP-EVVGQLQSLTSLNLRSNQLSTLPE 340

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L  L  LYL   QL   P  + +LQ L  L+LS N L ++PE    L SLT LD
Sbjct: 341 --VVGQLQSLTSLYLSSNQLSTLPEAVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLD 398

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LS N +S LP  +G L+ SL +L L  N L ++
Sbjct: 399 LSSNQLSTLPEVVGQLQ-SLTSLYLRSNQLSTL 430



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 135/405 (33%), Positives = 195/405 (48%), Gaps = 45/405 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N+L+ L    +     LT L    N L+ +PE +G L  L  LDL  N++ +
Sbjct: 142 LTSLDLSSNQLSTLPE--VVGQQSLTSLNLRSNQLSTLPEVVGQLQSLTSLDLSSNQLST 199

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  +    SL    +  N LS LP  +G+L  L +L+L SNQL        QL+ L+ L
Sbjct: 200 LPEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSL 259

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DLS+N LS LP  +G++ +L  L L  N L TL                    PE     
Sbjct: 260 DLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTL--------------------PE----- 294

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                     +    S+TS  L L    LS +P  + +   +T L+L  N +  LP  + 
Sbjct: 295 ---------AVGQLQSLTS--LDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEVVG 343

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              SL +L LS N++   P+A+   L SL+ L L +N L  +P +    +  L  LDLS 
Sbjct: 344 QLQSLTSLYLSSNQLSTLPEAV-GQLQSLTSLNLSSNQLSTLP-EVVGQLQSLTSLDLSS 401

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +++LPE      L  L  LYLR  QL   P  + +LQ L  LDLS N L ++PE    
Sbjct: 402 NQLSTLPE--VVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQ 459

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L SLT L+L  N +S LP  +G L+ SL +L L  N L ++   +
Sbjct: 460 LQSLTSLNLRSNQLSTLPEAVGQLQ-SLTSLDLSSNQLSTLPEVV 503



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 182/380 (47%), Gaps = 20/380 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L +  N+L+ L    +     LT L  S N L+ +PE +G L  L  LDL  N++ +
Sbjct: 348 LTSLYLSSNQLSTLPE-AVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLST 406

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  +    SL   Y+ +N LS LP  +G+L  L +LDL SNQL        QL+ L+ L
Sbjct: 407 LPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSL 466

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L +N LS LP  +G++ +L  L L+ N L TL         P ++  L+S    +  S 
Sbjct: 467 NLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTL---------PEVVGQLQSLTSLDLRSN 517

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             +T  +++     L+     L L    LS +P  + +   +T L L  N +  LP  + 
Sbjct: 518 QLSTLPEVVGQLQSLT----SLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEVIG 573

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              SL +L LS N++ + P  I   L +L  L L  N L Q+P++  +   +L +  LS 
Sbjct: 574 QLQSLTSLDLSDNQLSELPRQI-CQLDTLCSLFLGGNFLEQLPAELSR---LLHLEKLSL 629

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
             ASL  +  + ++        +  +L      +  L  L +LDLS N L  +    ++L
Sbjct: 630 GSASLIFDSYYHNVLRAFGASKQGNKLTHISDCLFSLPSLEVLDLSFNQLSRVDSKIQSL 689

Query: 360 TSLTELDLSDNNISALPPEL 379
             L ++DL  N +  +PPE+
Sbjct: 690 EKLKQIDLRGNPL-PIPPEI 708



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 120/342 (35%), Positives = 169/342 (49%), Gaps = 29/342 (8%)

Query: 80  ALSALPAELGKLSKLGTLDL---------HSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 129
            +  LP E+GKL+KL TL L           N L+    E  +L  L  L L+ N    +
Sbjct: 27  GIDELPPEIGKLTKLKTLVLGLWDKQRRRRGNNLQTLPDEIGRLTELRSLFLAYNQFEEI 86

Query: 130 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSR----LPENEDSEASTTK 184
           P  +G++  LR L L+ N L TL    V G   +L   YLRS     LPE      S T 
Sbjct: 87  PEVVGRLRKLRSLNLSSNQLSTLPE--VVGQLQSLTSLYLRSNQLSTLPEVVGQLQSLTS 144

Query: 185 EDLIT--MATRLSVTSKE----LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
            DL +  ++T   V  ++    L+L    LS +P  + +   +T LDLS N +  LP  +
Sbjct: 145 LDLSSNQLSTLPEVVGQQSLTSLNLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVV 204

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
               SL +L LS N++   P+ ++  L SL+ L L +N L  +P +    +  L  LDLS
Sbjct: 205 GQLQSLTSLDLSFNQLSTLPE-VVGQLQSLTSLNLSSNQLSTLP-EVVGQLQSLTSLDLS 262

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N +++LPE      L  L  LYLR  QL   P  + +LQ L  LDLS N L ++PE   
Sbjct: 263 SNQLSTLPE--VVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVG 320

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            L SLT L+L  N +S LP  +G L+ SL +L L  N L ++
Sbjct: 321 QLQSLTSLNLRSNQLSTLPEVVGQLQ-SLTSLYLSSNQLSTL 361



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 131/295 (44%), Gaps = 57/295 (19%)

Query: 110 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
           EA     S LDL+   +  LPPEIGK+T L+ L+L                         
Sbjct: 12  EAAADGRSTLDLAGMGIDELPPEIGKLTKLKTLVL------------------------- 46

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                                     +  K+    G NL  +P EI    E+  L L+ N
Sbjct: 47  -------------------------GLWDKQRRRRGNNLQTLPDEIGRLTELRSLFLAYN 81

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
             +E+P  +     L++L LS N++   P+ ++  L SL+ L L +N L  +P +    +
Sbjct: 82  QFEEIPEVVGRLRKLRSLNLSSNQLSTLPE-VVGQLQSLTSLYLRSNQLSTLP-EVVGQL 139

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L  LDLS N +++LPE     SL  L    LR  QL   P  + +LQ L  LDLS N 
Sbjct: 140 QSLTSLDLSSNQLSTLPEVVGQQSLTSLN---LRSNQLSTLPEVVGQLQSLTSLDLSSNQ 196

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L ++PE    L SLT LDLS N +S LP  +G L+ SL +L L  N L ++   +
Sbjct: 197 LSTLPEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQ-SLTSLNLSSNQLSTLPEVV 250


>gi|157124572|ref|XP_001654111.1| shoc2 [Aedes aegypti]
 gi|108873917|gb|EAT38142.1| AAEL009928-PA [Aedes aegypti]
          Length = 472

 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 127/368 (34%), Positives = 180/368 (48%), Gaps = 21/368 (5%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
           RLDL ++ I  IP S+  C SL EFY+  N +S+LP E+G LS L TL L+ N L     
Sbjct: 42  RLDLSKSSITIIPPSVKDCTSLVEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSLPD 101

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
               L+ L VLDL +N LS +P  I K+ TL  L L  N ++ +  +L N     +L   
Sbjct: 102 SLQNLKQLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKVVGDNLKNLSHLTMLS-- 159

Query: 169 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
              L EN+  E  +    L+ + T        L L   +L  +P+EI     +T LDL  
Sbjct: 160 ---LRENKIHELPSAIGHLVNLTT--------LDLSHNHLKHLPAEIGNCVNLTALDLQH 208

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N + ++P  + + A+L  L L  N++   P + L + + +    ++ N + Q+P      
Sbjct: 209 NDLLDIPETIGNLANLMRLGLRYNQLTSIPVS-LKNCTHMDEFNVEGNGISQLPDGLLAS 267

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  L  + LS N   S P   P +   ++ EL      L + P DI  LQ L IL LS N
Sbjct: 268 LSNLTTITLSRNAFHSYPSGGP-AQFTNMVELNFGTNSLTKLPDDIHCLQNLEILILSNN 326

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
            L+ IP    NL  L  LDL +N + +LP E+GLL   LQ L L  N L S+ RTI   G
Sbjct: 327 VLKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLH-DLQKLILQSNQLTSLPRTI---G 382

Query: 408 TKAVLKYL 415
               L YL
Sbjct: 383 HLTNLTYL 390



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 197/418 (47%), Gaps = 24/418 (5%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           GNK++ L    I   + L  L  ++N L  +P+++ +L +L  LDL  N++  IP  I  
Sbjct: 70  GNKISSLPVE-IGCLSNLKTLALNENSLTSLPDSLQNLKQLKVLDLRHNKLSEIPDVIYK 128

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 126
             +L   Y+  N +  +   L  LS L  L L  N++ E       L  L+ LDLS+N L
Sbjct: 129 LHTLTTLYLRFNRIKVVGDNLKNLSHLTMLSLRENKIHELPSAIGHLVNLTTLDLSHNHL 188

Query: 127 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 186
             LP EIG    L  L L  N L  +  ++ N     L   +R  L  N+ +    + ++
Sbjct: 189 KHLPAEIGNCVNLTALDLQHNDLLDIPETIGN-----LANLMRLGLRYNQLTSIPVSLKN 243

Query: 187 LITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL-SSCASL 244
              M         E ++EG  +S +P  +  +   +T + LSRN+    P    +   ++
Sbjct: 244 CTHM--------DEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNM 295

Query: 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 303
             L    N +   PD I   L +L  L L NN L+++P +   ++  L++LDL  N + S
Sbjct: 296 VELNFGTNSLTKLPDDI-HCLQNLEILILSNNVLKRIP-NTIGNLKKLRVLDLEENRLES 353

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
           LP       L  LQ+L L+  QL   P  I  L  L  L + +N+LQ +PE    L +L 
Sbjct: 354 LPSE--IGLLHDLQKLILQSNQLTSLPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLE 411

Query: 364 ELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            L ++DN ++  LP EL L + +L  + ++  PL ++   ++  G   V++YLK   P
Sbjct: 412 SLYINDNASLVKLPYELALCQ-NLAIMSIENCPLSALPPEVVGGGPSLVIQYLKLHSP 468



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 141/297 (47%), Gaps = 17/297 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N L  L    I +   LT L    N L  +PETIG+L+ L+RL L  N++ S
Sbjct: 178 LTTLDLSHNHLKHLPAE-IGNCVNLTALDLQHNDLLDIPETIGNLANLMRLGLRYNQLTS 236

Query: 61  IPSSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--CVEACQLRLS 117
           IP S+  C  + EF +  N +S LP   L  LS L T+ L  N    Y     A    + 
Sbjct: 237 IPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNMV 296

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            L+   NSL+ LP +I  +  L  L+L+ N L+ + +++ N      LK LR    E   
Sbjct: 297 ELNFGTNSLTKLPDDIHCLQNLEILILSNNVLKRIPNTIGN------LKKLRVLDLEENR 350

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
            E+  ++  L+    +L + S +       L+++P  I     +T L +  N++Q LP E
Sbjct: 351 LESLPSEIGLLHDLQKLILQSNQ-------LTSLPRTIGHLTNLTYLSVGENNLQFLPEE 403

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           + +  +L++L ++ N         L    +L+ + ++N PL  +P +     P L I
Sbjct: 404 IGTLENLESLYINDNASLVKLPYELALCQNLAIMSIENCPLSALPPEVVGGGPSLVI 460



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 89/175 (50%), Gaps = 3/175 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M +L+   N LT L ++ I     L  LI S N+L  +P TIG+L +L  LDL +NR+ S
Sbjct: 295 MVELNFGTNSLTKLPDD-IHCLQNLEILILSNNVLKRIPNTIGNLKKLRVLDLEENRLES 353

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +PS I     L +  + +N L++LP  +G L+ L  L +  N L+    E   L  L  L
Sbjct: 354 LPSEIGLLHDLQKLILQSNQLTSLPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESL 413

Query: 120 DLSNN-SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            +++N SL  LP E+     L  + +   PL  L   +V G    +++YL+   P
Sbjct: 414 YINDNASLVKLPYELALCQNLAIMSIENCPLSALPPEVVGGGPSLVIQYLKLHSP 468


>gi|417763987|ref|ZP_12411960.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353819|gb|EJP05972.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 452

 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 129/385 (33%), Positives = 187/385 (48%), Gaps = 38/385 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N LT+L    I     L EL  S N L  +P+ +G L  L RLDLHQNR+ +
Sbjct: 73  LQRLDLSFNSLTILPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLAT 131

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  + +N L+ LP E+ +L  L  LDLH NQL     E  QL+ L  L
Sbjct: 132 LPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTL 191

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L    L+ LP EIG++  L+ L L  N L TL   +  G    L               
Sbjct: 192 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI--GELQNL--------------- 234

Query: 180 ASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
                E L+    R++   KE         L L    L+ +P EI +   + +LDL +N 
Sbjct: 235 -----EILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQ 289

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           +  LP E+    +LQ L L  N++   P  I   L +L  L LDNN L  +P +  + + 
Sbjct: 290 LTTLPKEIGQLQNLQELCLDENQLTTLPKEI-EQLQNLRVLDLDNNQLTTLPKEVLR-LQ 347

Query: 291 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
            LQ+L L  N +++LP+      L +LQ L L   QL   P +I +LQ L+ L L +N L
Sbjct: 348 SLQVLALGSNRLSTLPKE--IGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQL 405

Query: 350 QSIPEGFKNLTSLTELDLSDNNISA 374
            + P+  + L +L EL L  N +S+
Sbjct: 406 TTFPKEIRQLKNLQELHLYLNPLSS 430



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 180/368 (48%), Gaps = 43/368 (11%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ IG L  L RLDL  N +  +P  I    +L E  +  N+L+ LP E+G+L  L  L
Sbjct: 63  LPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 122

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DLH N+L    +E  QL+ L  LDL++N L+ LP EI ++  L++L L  N L TL    
Sbjct: 123 DLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL---- 178

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                P  +  L++                            K L+L    L+ +P EI 
Sbjct: 179 -----PKEIGQLQN---------------------------LKTLNLIVTQLTTLPKEIG 206

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           E   +  L+L  N +  LP E+    +L+ L+L  N+I   P  I   L +L  L L  N
Sbjct: 207 ELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEI-GQLQNLQWLDLHQN 265

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            L  +P +    +  LQ LDL  N + +LP+      L +LQEL L   QL   P +I +
Sbjct: 266 QLTILPKE-IGQLQNLQRLDLHQNQLTTLPKE--IGQLQNLQELCLDENQLTTLPKEIEQ 322

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           LQ LR+LDL  N L ++P+    L SL  L L  N +S LP E+G L+ +LQ L L  N 
Sbjct: 323 LQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQ-NLQVLALISNQ 381

Query: 396 LRSIRRTI 403
           L ++ + I
Sbjct: 382 LTTLPKEI 389


>gi|260788686|ref|XP_002589380.1| hypothetical protein BRAFLDRAFT_77822 [Branchiostoma floridae]
 gi|229274557|gb|EEN45391.1| hypothetical protein BRAFLDRAFT_77822 [Branchiostoma floridae]
          Length = 670

 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 201/443 (45%), Gaps = 41/443 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S+LD +GN +T L    I+S   L +L    N L+ +P+ +  L  L  L +  N++  
Sbjct: 61  LSRLDADGNMMTSLPQ-AISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKK 119

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I  C +L  F   NN LS  P  + KL KL  L ++ NQL E     C L  L  L
Sbjct: 120 LPTKIFSCLNLVNFDASNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKL 179

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            + NN+LS  PP + K+  LR+L + GN L  + S + + P    L    + L     S 
Sbjct: 180 SVYNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNL-----ST 234

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        +EL +    L+ +PS +     + KL +  N++   PP + 
Sbjct: 235 FPPGVEKLQKL--------RELYIHDNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVE 286

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR---------------QVPSD 284
               L+ L +  N++ + P  +  SL +L  L + NNP+R                VPS 
Sbjct: 287 KLQKLRELYIHHNQLTEVPSGV-CSLPNLEVLSVGNNPIRCLPDEVTRLTRMKTLSVPSC 345

Query: 285 GFKDIP--MLQILDLSYNIASLPENPPFSSLP-------HLQELYLRRMQLREAPTDILR 335
            F + P  +LQ+  L    A       F  +P       HL  L L    LR  P+ +  
Sbjct: 346 QFDEFPRQVLQLKTLEMLYAGQNGGRKFDMVPDEVGNLQHLWFLALENNLLRTLPSTMSH 405

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L  LR + L  N   + PE    L ++ +LD+ +NNI+ +P  L   +  L+ L + GNP
Sbjct: 406 LHNLRQVQLWNNKFDTFPEVLCELPAMEKLDIKNNNITRIPTALHRAD-KLRDLDVSGNP 464

Query: 396 LRSIRRTILDRGTKAVLKYLKDK 418
           L    + +  +GT A++ +LK +
Sbjct: 465 LTYPPQDVCKQGTGAIMAFLKQE 487



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 1/152 (0%)

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  +     L    + NN L  LP+ +  L  L  + L +N+   +    C+L  +  L
Sbjct: 376 VPDEVGNLQHLWFLALENNLLRTLPSTMSHLHNLRQVQLWNNKFDTFPEVLCELPAMEKL 435

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+ NN+++ +P  + +   LR L ++GNPL      +    T A++ +L+    ++E   
Sbjct: 436 DIKNNNITRIPTALHRADKLRDLDVSGNPLTYPPQDVCKQGTGAIMAFLKQEAEKDERIL 495

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
           ++  +  +    T+    ++ L L    + AI
Sbjct: 496 SAFNRLSVRMSQTQWKPLARSLGLSNRAMDAI 527


>gi|45656721|ref|YP_000807.1| lipoprotein [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|421102937|ref|ZP_15563539.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599957|gb|AAS69444.1| putative lipoprotein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|410367252|gb|EKP22638.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
          Length = 521

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 138/408 (33%), Positives = 205/408 (50%), Gaps = 26/408 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++   KLT L    I     L EL  S N L  +P+ +G L  L RL+L+  ++ +
Sbjct: 119 LQRLNLNSQKLTTLPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTT 177

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  +  N+L+ LP E+G+L  L  L+L+S +L     E  QLR L  L
Sbjct: 178 LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQEL 237

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DLS NSL+ LP E+G++  L++L L  N L TL         P  +  L++    + +S 
Sbjct: 238 DLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL---------PMEIGQLKNLQELDLNSN 288

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             TT    I     L    +EL L    L+ +P EI +   +  L+L    +  LP E+ 
Sbjct: 289 KLTTLPKEIRQLRNL----QELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIG 344

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+TL L  N++   P  I   L +L  L L  N +  +P +    +  LQ LDL  
Sbjct: 345 ELQNLKTLNLLDNQLTTLPKEI-GELQNLEILVLRENRITALPKE-IGQLQNLQRLDLHQ 402

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N + +LP+      L +LQEL L   QL   P +I +LQ LR+LDL  N L ++P+    
Sbjct: 403 NQLTTLPK--EIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQ 460

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS-----IRR 401
           L +L EL L +N ++  P E+  L+ +LQ L L  NPL S     IRR
Sbjct: 461 LQNLQELCLDENQLTTFPKEIRQLK-NLQELHLYLNPLSSKEKKRIRR 507



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 139/423 (32%), Positives = 211/423 (49%), Gaps = 40/423 (9%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+LT L    I     L EL  S N L  +P+ +G L  L RL+L+  ++ ++P 
Sbjct: 76  LDLGHNQLTALPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPK 134

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  +  N+L+ LP E+G+L  L  L+L+S +L     E  QLR L  LDLS
Sbjct: 135 EIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLS 194

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR------------S 170
            NSL+ LP E+G++  L++L L    L TL         P  +  LR            +
Sbjct: 195 FNSLTTLPKEVGQLENLQRLNLNSQKLTTL---------PKEIGQLRNLQELDLSFNSLT 245

Query: 171 RLPENEDSEASTTKEDLITMATRLSV---------TSKELSLEGMNLSAIPSEIWEAGEI 221
            LP+      +  + DL     RL+            +EL L    L+ +P EI +   +
Sbjct: 246 TLPKEVGQLENLQRLDL--HQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNL 303

Query: 222 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
            +LDL RN +  LP E+    +L+TL L   ++   P  I   L +L  L L +N L  +
Sbjct: 304 QELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEI-GELQNLKTLNLLDNQLTTL 362

Query: 282 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
           P +   ++  L+IL L  N I +LP+      L +LQ L L + QL   P +I +LQ L+
Sbjct: 363 PKE-IGELQNLEILVLRENRITALPK--EIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQ 419

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIR 400
            L L +N L ++P+  + L +L  LDL +N ++ LP E+G L+ +LQ L LD N L +  
Sbjct: 420 ELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQ-NLQELCLDENQLTTFP 478

Query: 401 RTI 403
           + I
Sbjct: 479 KEI 481



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 128/380 (33%), Positives = 195/380 (51%), Gaps = 24/380 (6%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           LI S+  L  +P+ I  L  L  LDL  N++ ++P  I    +L E  +  N+L+ LP E
Sbjct: 53  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 146
           +G+L  L  L+L+S +L     E  QLR L  LDLS NSL+ LP E+G++  L++L L  
Sbjct: 113 VGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNS 172

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLE 204
             L TL         P  +  LR+        E   +   L T+   +      + L+L 
Sbjct: 173 QKLTTL---------PKEIGQLRNL------QELDLSFNSLTTLPKEVGQLENLQRLNLN 217

Query: 205 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 264
              L+ +P EI +   + +LDLS NS+  LP E+    +LQ L L +N++   P  I   
Sbjct: 218 SQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEI-GQ 276

Query: 265 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRR 323
           L +L  L L++N L  +P +  + +  LQ LDL  N + +LP+      L +L+ L L  
Sbjct: 277 LKNLQELDLNSNKLTTLPKE-IRQLRNLQELDLHRNQLTTLPK--EIGQLQNLKTLNLIV 333

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            QL   P +I  LQ L+ L+L  N L ++P+    L +L  L L +N I+ALP E+G L+
Sbjct: 334 TQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQ 393

Query: 384 PSLQALRLDGNPLRSIRRTI 403
            +LQ L L  N L ++ + I
Sbjct: 394 -NLQRLDLHQNQLTTLPKEI 412



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 113/217 (52%), Gaps = 6/217 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L    L+ +P EI +   +  LDL  N +  LP E+    +LQ L
Sbjct: 40  LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQEL 99

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            LS N +   P  +   L +L  L L++  L  +P +    +  LQ LDLS+N + +LP+
Sbjct: 100 DLSFNSLTTLPKEV-GQLENLQRLNLNSQKLTTLPKE-IGQLRNLQELDLSFNSLTTLPK 157

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +LQ L L   +L   P +I +L+ L+ LDLS NSL ++P+    L +L  L+
Sbjct: 158 --EVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLN 215

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L+   ++ LP E+G L  +LQ L L  N L ++ + +
Sbjct: 216 LNSQKLTTLPKEIGQLR-NLQELDLSFNSLTTLPKEV 251


>gi|170032991|ref|XP_001844363.1| leucine-rich repeat protein SHOC-2 [Culex quinquefasciatus]
 gi|261277883|sp|B0W6M9.1|SUR8_CULQU RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|167873320|gb|EDS36703.1| leucine-rich repeat protein SHOC-2 [Culex quinquefasciatus]
          Length = 628

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 131/393 (33%), Positives = 185/393 (47%), Gaps = 41/393 (10%)

Query: 48  LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 107
           ++RLDL ++ I  IP S+  C SL EFY+  N +S+LP E+G LS L TL L+ N L   
Sbjct: 149 ILRLDLSKSSITVIPPSVKDCTSLIEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSL 208

Query: 108 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
                 L+ L VLDL +N LS +P  I K+ TL  L L  N ++ +  +L N  +  +L 
Sbjct: 209 PDSLQNLKALKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKVVGDNLKNLSSLTMLS 268

Query: 167 YLRSRLPENEDSEASTTKEDLITM------------ATRLSVTSKELSLEGMNLSAIPSE 214
              +++  +E   A     +L T+            A    V    L L+  +L  IP  
Sbjct: 269 LRENKI--HELPAAIGHLRNLTTLDLSHNHLKHLPEAIGNCVNLTALDLQHNDLLDIPET 326

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           I     + +L L  N +  +P  L +C  +    +  N I   PD +L SLS+L+ + L 
Sbjct: 327 IGNLANLQRLGLRYNQLTAIPVSLRNCIHMDEFNVEGNSISQLPDGLLASLSNLTTITLS 386

Query: 275 NNPLRQVPSDG---FKDIPML-----QILDLSYNIAS---------LPENPPFSSLP--- 314
            N     PS G   F ++  +     QI  + Y I S         + EN   +SLP   
Sbjct: 387 RNAFHSYPSGGPAQFTNVTSINMEHNQIDKIQYGIFSRAKGLTKLNMKEN-ALTSLPLDI 445

Query: 315 ----HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
                + EL      L + P DI  LQ L IL LS N L+ IP    NL  L  LDL +N
Sbjct: 446 GTWSQMVELNFGTNSLAKLPDDIHCLQNLEILILSNNMLKRIPNTIGNLKKLRVLDLEEN 505

Query: 371 NISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            + +LP E+GLL   LQ L L  N L+S+ RTI
Sbjct: 506 RLESLPSEIGLLH-DLQKLILQSNALQSLPRTI 537



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 39/297 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRIL 59
           M + +VEGN ++ L + L+AS + LT +  S+N  +  P       + +  +++  N+I 
Sbjct: 356 MDEFNVEGNSISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSINMEHNQID 415

Query: 60  SIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLS 117
            I   I S    L +  M  NAL++LP ++G  S++  L+  +N L +   +  C   L 
Sbjct: 416 KIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWSQMVELNFGTNSLAKLPDDIHCLQNLE 475

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
           +L LSNN L  +P  IG +  LR L L  N L +L S +       LL  L         
Sbjct: 476 ILILSNNMLKRIPNTIGNLKKLRVLDLEENRLESLPSEI------GLLHDL--------- 520

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                                ++L L+   L ++P  I     +T L +  N++Q LP E
Sbjct: 521 ---------------------QKLILQSNALQSLPRTIGHLTNLTYLSVGENNLQYLPEE 559

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           + +  +L++L ++ N         L    +L+ + ++N PL  +P +     P L I
Sbjct: 560 IGTLENLESLYINDNASLVKLPYELALCQNLAIMSIENCPLSALPPEVVGGGPSLVI 616



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 26/198 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTEL-----------------------IASKNLLNG 37
           ++KL+++ N LT L  + I +W+ + EL                       I S N+L  
Sbjct: 428 LTKLNMKENALTSLPLD-IGTWSQMVELNFGTNSLAKLPDDIHCLQNLEILILSNNMLKR 486

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P TIG+L +L  LDL +NR+ S+PS I     L +  + +NAL +LP  +G L+ L  L
Sbjct: 487 IPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDLQKLILQSNALQSLPRTIGHLTNLTYL 546

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNN-SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
            +  N L+    E   L  L  L +++N SL  LP E+     L  + +   PL  L   
Sbjct: 547 SVGENNLQYLPEEIGTLENLESLYINDNASLVKLPYELALCQNLAIMSIENCPLSALPPE 606

Query: 156 LVNGPTPALLKYLRSRLP 173
           +V G    +++YL+   P
Sbjct: 607 VVGGGPSLVIQYLKLHSP 624


>gi|428311014|ref|YP_007121991.1| hypothetical protein Mic7113_2802 [Microcoleus sp. PCC 7113]
 gi|428252626|gb|AFZ18585.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
          Length = 348

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/373 (33%), Positives = 184/373 (49%), Gaps = 45/373 (12%)

Query: 47  RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 106
           ++  LDLH +++ ++P+ I     L    +  N L  LP E+G+L+ L  LDL  NQLK 
Sbjct: 17  KVTSLDLHNHQLTTLPAEIGNLTHLTRLSLYGNQLGMLPPEIGQLTNLKELDLSGNQLKA 76

Query: 107 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
              E   L  L+ L L NN L+ LP EIG +T L  L L  N L                
Sbjct: 77  LPEEIGNLTNLTDLCLDNNQLTALPKEIGNLTNLTGLSLDSNQL---------------- 120

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
               + LPE            LI + TRLS+ S  L+        +P EI     + +L 
Sbjct: 121 ----TALPEEIGK--------LINL-TRLSLYSNRLT-------GLPKEIGNLTHLNRLS 160

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
              N +  LP E+ +  +L  L L  N++++ P  I  +L++L+ L +DNN L  +P + 
Sbjct: 161 CDNNQLMTLPKEIGNFINLTGLSLDNNQLRELPQDI-GNLTNLTRLSIDNNKLTSLPKE- 218

Query: 286 FKDIPMLQILDLSYNIAS--LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
             ++  L  L L  N  +  L E     +L HL  L +   QL+  P ++ +L  L  L 
Sbjct: 219 IGNLTNLTQLSLDNNKLTELLKE---IGNLTHLTALAIDSNQLKSLPEEMGQLINLTTLS 275

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L +N L S+P    NLT LT+L L  N ++ALP E+G+L  +L +L LD NPL S    I
Sbjct: 276 LYKNQLSSLPTAIGNLTHLTKLSLYSNQLTALPKEIGIL-TNLTSLSLDNNPLTSPPSEI 334

Query: 404 LDRGTKAVLKYLK 416
           + +GT+A+L YL+
Sbjct: 335 IQQGTQAILAYLR 347



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 114/239 (47%), Gaps = 27/239 (11%)

Query: 187 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
           LI  A    VTS  L L    L+ +P+EI     +T+L L  N +  LPPE+    +L+ 
Sbjct: 9   LIEQAANDKVTS--LDLHNHQLTTLPAEIGNLTHLTRLSLYGNQLGMLPPEIGQLTNLKE 66

Query: 247 LILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDNNPLRQVPSD 284
           L LS N++K  P+ I                      + +L++L+ L LD+N L  +P +
Sbjct: 67  LDLSGNQLKALPEEIGNLTNLTDLCLDNNQLTALPKEIGNLTNLTGLSLDSNQLTALPEE 126

Query: 285 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
             K I + ++   S  +  LP+     +L HL  L     QL   P +I     L  L L
Sbjct: 127 IGKLINLTRLSLYSNRLTGLPK--EIGNLTHLNRLSCDNNQLMTLPKEIGNFINLTGLSL 184

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             N L+ +P+   NLT+LT L + +N +++LP E+G L  +L  L LD N L  + + I
Sbjct: 185 DNNQLRELPQDIGNLTNLTRLSIDNNKLTSLPKEIGNL-TNLTQLSLDNNKLTELLKEI 242



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 25/193 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L  + N+L  L    I ++  LT L    N L  +P+ IG+L+ L RL +  N++ S
Sbjct: 156 LNRLSCDNNQLMTLPKE-IGNFINLTGLSLDNNQLRELPQDIGNLTNLTRLSIDNNKLTS 214

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------ 114
           +P  I    +L +  + NN L+ L  E+G L+ L  L + SNQLK    E  QL      
Sbjct: 215 LPKEIGNLTNLTQLSLDNNKLTELLKEIGNLTHLTALAIDSNQLKSLPEEMGQLINLTTL 274

Query: 115 ------------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
                              L+ L L +N L+ LP EIG +T L  L L  NPL +  S +
Sbjct: 275 SLYKNQLSSLPTAIGNLTHLTKLSLYSNQLTALPKEIGILTNLTSLSLDNNPLTSPPSEI 334

Query: 157 VNGPTPALLKYLR 169
           +   T A+L YLR
Sbjct: 335 IQQGTQAILAYLR 347


>gi|110626127|ref|NP_001030098.1| leucine-rich repeat-containing protein 40 [Rattus norvegicus]
 gi|76779394|gb|AAI05889.1| Leucine rich repeat containing 40 [Rattus norvegicus]
          Length = 361

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 195/383 (50%), Gaps = 42/383 (10%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCV 109
           L L +N++  +P     C  L E Y+  N +  L AE L  L  +  LDL SN+L+    
Sbjct: 7   LYLRRNKLRVLPE-FPSCRQLKELYLAENQIEKLGAEHLQHLQAILVLDLRSNKLRSVPE 65

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
           E   L+ L  LDLSNN +S LP  +G +  L+ L L GNPLRT+R  ++   T  +LKYL
Sbjct: 66  EMALLQSLERLDLSNNDISSLPCSLGNLH-LKFLALEGNPLRTIRREIIAKGTQEVLKYL 124

Query: 169 RSRLPENEDSEASTTKEDLITMATRLSV------TSKELSLEGMNLSAIPSEIWEAGE-- 220
           RS++ ++  ++  +  E  +T+ +   V      T K L       + IP +I++A +  
Sbjct: 125 RSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIVTLKLLDYSDKQATLIPDDIFDATKNT 184

Query: 221 -ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
            +T ++ S+N + E+P  +   A L+ ++L  N           S + LS +        
Sbjct: 185 VVTSINFSKNQLCEIPQRI---AELKEMVLDVN----------LSFNKLSLV-------- 223

Query: 280 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
              S     +  L  LDL  N ++SLPE    SSL  LQ + L   + +  P  +  +  
Sbjct: 224 ---SHELCLLQKLAFLDLRNNFLSSLPEE--MSSLTKLQTINLSFNRFKVFPAVLYHIST 278

Query: 339 LRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
           L  + +S N + S+ P   K + +L+ LDL +N++  +PPELG     L+ L LDGNP R
Sbjct: 279 LETILISNNQVGSVDPLKMKLMENLSTLDLQNNDLLQIPPELGNC-VQLRTLLLDGNPFR 337

Query: 398 SIRRTILDRGTKAVLKYLKDKIP 420
             R  IL +GT AVL+YL+D+IP
Sbjct: 338 VPRAAILMKGTAAVLEYLRDRIP 360



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 77/116 (66%), Gaps = 3/116 (2%)

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
           P F S   L+ELYL   Q+ +   + L+ LQ + +LDL  N L+S+PE    L SL  LD
Sbjct: 18  PEFPSCRQLKELYLAENQIEKLGAEHLQHLQAILVLDLRSNKLRSVPEEMALLQSLERLD 77

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
           LS+N+IS+LP  LG L   L+ L L+GNPLR+IRR I+ +GT+ VLKYL+ KI ++
Sbjct: 78  LSNNDISSLPCSLGNLH--LKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDD 131



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 28/198 (14%)

Query: 4   LDVEGNKLTVLSNNLIASW--TMLTELIASKNLLNGMPETIGSLSRLI-RLDLHQNRILS 60
           LD    + T++ +++  +   T++T +  SKN L  +P+ I  L  ++  ++L  N++  
Sbjct: 163 LDYSDKQATLIPDDIFDATKNTVVTSINFSKNQLCEIPQRIAELKEMVLDVNLSFNKLSL 222

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY------------- 107
           +   +     LA   + NN LS+LP E+  L+KL T++L  N+ K +             
Sbjct: 223 VSHELCLLQKLAFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVFPAVLYHISTLETI 282

Query: 108 --------CVEACQLRL----SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
                    V+  +++L    S LDL NN L  +PPE+G    LR LLL GNP R  R++
Sbjct: 283 LISNNQVGSVDPLKMKLMENLSTLDLQNNDLLQIPPELGNCVQLRTLLLDGNPFRVPRAA 342

Query: 156 LVNGPTPALLKYLRSRLP 173
           ++   T A+L+YLR R+P
Sbjct: 343 ILMKGTAAVLEYLRDRIP 360



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 38/309 (12%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGM-PETIGSLSRLIRLDLHQNRILSIPSSISG 67
           NKL VL      S   L EL  ++N +  +  E +  L  ++ LDL  N++ S+P  ++ 
Sbjct: 12  NKLRVLPE--FPSCRQLKELYLAENQIEKLGAEHLQHLQAILVLDLRSNKLRSVPEEMAL 69

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK----EYCVEACQ-----LRLSV 118
             SL    + NN +S+LP  LG L  L  L L  N L+    E   +  Q     LR  +
Sbjct: 70  LQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKI 128

Query: 119 LDLSNNSLSGLPP-----------EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL--- 164
            D   N    +P             I  + TL+ L  +      +   + +     +   
Sbjct: 129 KDDRTNQNDSVPETAMTLPSEARVNIHAIVTLKLLDYSDKQATLIPDDIFDATKNTVVTS 188

Query: 165 LKYLRSRLPE--NEDSEASTTKEDLITMATRLSVTSKEL---------SLEGMNLSAIPS 213
           + + +++L E     +E      D+     +LS+ S EL          L    LS++P 
Sbjct: 189 INFSKNQLCEIPQRIAELKEMVLDVNLSFNKLSLVSHELCLLQKLAFLDLRNNFLSSLPE 248

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           E+    ++  ++LS N  +  P  L   ++L+T+++S N++       +  + +LS L L
Sbjct: 249 EMSSLTKLQTINLSFNRFKVFPAVLYHISTLETILISNNQVGSVDPLKMKLMENLSTLDL 308

Query: 274 DNNPLRQVP 282
            NN L Q+P
Sbjct: 309 QNNDLLQIP 317


>gi|440802335|gb|ELR23264.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 845

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 132/410 (32%), Positives = 195/410 (47%), Gaps = 51/410 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD++ N+L  L          LT+L  + NL +  PE+I  L  L  L++  NRI  
Sbjct: 151 LKSLDIDNNRLKTLPPEF-GDLGSLTQLTCANNLFSHFPESICRLGFLKTLNISCNRITQ 209

Query: 61  IPSSISGCC-SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 118
           +P +I+    S+ E  +  N     P  L     L TLD   N L +      QL  L+ 
Sbjct: 210 LPDAIAQLGDSITELDLSGNRFVTFPESLAGCRSLITLDFRDNNLCDLADNISQLCELAT 269

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           L+LS+N L+ LP +IG+MT L +L L+ N +  L   L  G    L K   SR       
Sbjct: 270 LNLSHNKLTTLPRQIGEMTVLMELNLSKNKIAHLPPEL--GHLSFLGKLYLSR------- 320

Query: 179 EASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
                   L T+   LS  +  +EL L    L  +P EI++  ++  L L  N++  LPP
Sbjct: 321 ------NALATLPIELSNIAFIQELDLSNNGLDDLPIEIFKLDKLQTLKLDCNNLTHLPP 374

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF---------- 286
           EL     LQ L +S N++   P A ++ LS L  L +  N ++Q+P DG           
Sbjct: 375 ELGHLFRLQHLYVSNNQLTTLP-AEISQLSRLQVLSIYQNAIKQLP-DGMGALKHIESIC 432

Query: 287 ----------------KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 329
                             +P L+ L LS N + S+PE     +L  L+ELYL R ++ E 
Sbjct: 433 LGDNLLDESGLAALEKATMPALEQLVLSGNRLTSIPEG--LCNLASLKELYLSRNEIAEL 490

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
           P  I RL ++RI DLS N++ ++P    +L SL E++LS N +S+LPPE 
Sbjct: 491 PEAITRLNKIRIFDLSDNAIAALPSFISSLHSLREINLSYNRLSSLPPEF 540



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 129/414 (31%), Positives = 201/414 (48%), Gaps = 19/414 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L + GNKLT L +    +   L  L   KN L  +P ++G LS L+RL  H N +  
Sbjct: 58  LTSLRINGNKLTGLPSLGSGALKELEVLDVGKNRLRSLPGSVGDLSALVRLIAHCNLLED 117

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  +    +L    +  N L  LP E+GKL  L +LD+ +N+LK    E   L  L+ L
Sbjct: 118 LPPGVGELANLTVLDLSTNNLKQLPPEVGKLHALKSLDIDNNRLKTLPPEFGDLGSLTQL 177

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN-GPTPALLKYLRSRLPENEDS 178
             +NN  S  P  I ++  L+ L ++ N +  L  ++   G +   L    +R     +S
Sbjct: 178 TCANNLFSHFPESICRLGFLKTLNISCNRITQLPDAIAQLGDSITELDLSGNRFVTFPES 237

Query: 179 EAST--------TKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
            A             +L  +A  +S   +   L+L    L+ +P +I E   + +L+LS+
Sbjct: 238 LAGCRSLITLDFRDNNLCDLADNISQLCELATLNLSHNKLTTLPRQIGEMTVLMELNLSK 297

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N I  LPPEL   + L  L LSRN +   P   L++++ +  L L NN L  +P + FK 
Sbjct: 298 NKIAHLPPELGHLSFLGKLYLSRNALATLP-IELSNIAFIQELDLSNNGLDDLPIEIFK- 355

Query: 289 IPMLQILDLSY-NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  LQ L L   N+  LP  P    L  LQ LY+   QL   P +I +L +L++L + QN
Sbjct: 356 LDKLQTLKLDCNNLTHLP--PELGHLFRLQHLYVSNNQLTTLPAEISQLSRLQVLSIYQN 413

Query: 348 SLQSIPEGFKNLTSLTELDLSDN--NISALPPELGLLEPSLQALRLDGNPLRSI 399
           +++ +P+G   L  +  + L DN  + S L        P+L+ L L GN L SI
Sbjct: 414 AIKQLPDGMGALKHIESICLGDNLLDESGLAALEKATMPALEQLVLSGNRLTSI 467



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 3/171 (1%)

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           + ++I  A +   LDL    ++ LP  L     L  L +S N +    D ++  L +L+ 
Sbjct: 1   MEAKIATARQTFALDLQGFKLRALPKGLFDLKELSALNVSSNDLTALEDEVVRLLPALTS 60

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 329
           L+++ N L  +PS G   +  L++LD+  N + SLP +     L  L  L      L + 
Sbjct: 61  LRINGNKLTGLPSLGSGALKELEVLDVGKNRLRSLPGS--VGDLSALVRLIAHCNLLEDL 118

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           P  +  L  L +LDLS N+L+ +P     L +L  LD+ +N +  LPPE G
Sbjct: 119 PPGVGELANLTVLDLSTNNLKQLPPEVGKLHALKSLDIDNNRLKTLPPEFG 169



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 133/307 (43%), Gaps = 51/307 (16%)

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENE 176
            LDL    L  LP  +  +  L  L ++ N L  L   +V      LL  L S R+  N+
Sbjct: 13  ALDLQGFKLRALPKGLFDLKELSALNVSSNDLTALEDEVVR-----LLPALTSLRINGNK 67

Query: 177 DSEASTTKEDLITMATRLSVTSKEL-SLEGM--NLSA-------------IPSEIWEAGE 220
            +   +     +     L V    L SL G   +LSA             +P  + E   
Sbjct: 68  LTGLPSLGSGALKELEVLDVGKNRLRSLPGSVGDLSALVRLIAHCNLLEDLPPGVGELAN 127

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPL 278
           +T LDLS N++++LPPE+    +L++L +  N++K  P     L SL+ L+C    NN  
Sbjct: 128 LTVLDLSTNNLKQLPPEVGKLHALKSLDIDNNRLKTLPPEFGDLGSLTQLTCA---NNLF 184

Query: 279 RQVPSDGFKDIPMLQILDLSYN-IASLPE---------------NPPFSSLPH------- 315
              P +    +  L+ L++S N I  LP+                  F + P        
Sbjct: 185 SHFP-ESICRLGFLKTLNISCNRITQLPDAIAQLGDSITELDLSGNRFVTFPESLAGCRS 243

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           L  L  R   L +   +I +L +L  L+LS N L ++P     +T L EL+LS N I+ L
Sbjct: 244 LITLDFRDNNLCDLADNISQLCELATLNLSHNKLTTLPRQIGEMTVLMELNLSKNKIAHL 303

Query: 376 PPELGLL 382
           PPELG L
Sbjct: 304 PPELGHL 310



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 61/300 (20%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L++  NKLT L    I   T+L EL  SKN +  +P  +G LS L +L L +N + +
Sbjct: 267 LATLNLSHNKLTTLPRQ-IGEMTVLMELNLSKNKIAHLPPELGHLSFLGKLYLSRNALAT 325

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  +S    + E  + NN L  LP E+ KL KL TL L  N L     E   L RL  L
Sbjct: 326 LPIELSNIAFIQELDLSNNGLDDLPIEIFKLDKLQTLKLDCNNLTHLPPELGHLFRLQHL 385

Query: 120 DLSNNSLSGLPPEIGK-------------------------------------------- 135
            +SNN L+ LP EI +                                            
Sbjct: 386 YVSNNQLTTLPAEISQLSRLQVLSIYQNAIKQLPDGMGALKHIESICLGDNLLDESGLAA 445

Query: 136 -----MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI-- 188
                M  L +L+L+GN L ++   L N  +   L   R+ + E  ++     K  +   
Sbjct: 446 LEKATMPALEQLVLSGNRLTSIPEGLCNLASLKELYLSRNEIAELPEAITRLNKIRIFDL 505

Query: 189 ---TMATRLSVTS-----KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
               +A   S  S     +E++L    LS++P E  +   +  L L  N++ +LP +L +
Sbjct: 506 SDNAIAALPSFISSLHSLREINLSYNRLSSLPPEFVKLTNLCVLYLMHNNLTDLPEDLQA 565



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 8/188 (4%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS-CASLQTLILSRNKIKDWPD 259
           L L+G  L A+P  +++  E++ L++S N +  L  E+     +L +L ++ NK+   P 
Sbjct: 14  LDLQGFKLRALPKGLFDLKELSALNVSSNDLTALEDEVVRLLPALTSLRINGNKLTGLPS 73

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 318
               +L  L  L +  N LR +P     D+  L  L    N +  LP  P    L +L  
Sbjct: 74  LGSGALKELEVLDVGKNRLRSLPG-SVGDLSALVRLIAHCNLLEDLP--PGVGELANLTV 130

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP- 377
           L L    L++ P ++ +L  L+ LD+  N L+++P  F +L SLT+L  ++N  S  P  
Sbjct: 131 LDLSTNNLKQLPPEVGKLHALKSLDIDNNRLKTLPPEFGDLGSLTQLTCANNLFSHFPES 190

Query: 378 --ELGLLE 383
              LG L+
Sbjct: 191 ICRLGFLK 198



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 1/118 (0%)

Query: 20  ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           A+   L +L+ S N L  +PE + +L+ L  L L +N I  +P +I+    +  F + +N
Sbjct: 449 ATMPALEQLVLSGNRLTSIPEGLCNLASLKELYLSRNEIAELPEAITRLNKIRIFDLSDN 508

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 136
           A++ALP+ +  L  L  ++L  N+L     E  +L  L VL L +N+L+ LP ++  M
Sbjct: 509 AIAALPSFISSLHSLREINLSYNRLSSLPPEFVKLTNLCVLYLMHNNLTDLPEDLQAM 566



 Score = 42.4 bits (98), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 42/67 (62%)

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
           I   +Q   LDL    L+++P+G  +L  L+ L++S N+++AL  E+  L P+L +LR++
Sbjct: 5   IATARQTFALDLQGFKLRALPKGLFDLKELSALNVSSNDLTALEDEVVRLLPALTSLRIN 64

Query: 393 GNPLRSI 399
           GN L  +
Sbjct: 65  GNKLTGL 71


>gi|157135396|ref|XP_001656638.1| mitotic protein phosphatase 1 regulator, putative [Aedes aegypti]
 gi|108881267|gb|EAT45492.1| AAEL003228-PA [Aedes aegypti]
          Length = 608

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 221/476 (46%), Gaps = 90/476 (18%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++  N  + + +N ++   ML  L  S N LN +P  IG L RL +L L+ NR++ +P+
Sbjct: 163 LNLAHNDFSEIHSN-VSDLIMLEVLDISFNSLNSLPGGIGFLVRLQQLTLNNNRLIELPN 221

Query: 64  SI---------------------------------------------SGCCSLAEFYMGN 78
            I                                             +GC +L E ++ N
Sbjct: 222 DIVNLRNLHKMDLAKNDLKQLPPVMGELRKLECLYVQHNDVVELPDFTGCDALKEIHISN 281

Query: 79  NALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 136
           N + ++PA+  + L +L  LDL  N++++   E   L  L+ LDLSNNS+S LP  +  +
Sbjct: 282 NFIKSIPADFCENLPQLKVLDLRDNKIEKLPDEISMLASLTRLDLSNNSISSLPSCLSTL 341

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR------LPENEDSE-ASTTKEDLIT 189
             L  L + GNP+R++R  ++   T  +LK LR R       PEN  +    +T  D+  
Sbjct: 342 AHLVSLQVEGNPIRSIRRDIIQCGTQRILKTLRERDGPGKGGPENVKAPFEESTFPDVYQ 401

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLI 248
           M        + + +   NL  +P +++ +A E                     AS+  + 
Sbjct: 402 MK-----KGRSMIVSNKNLIDVPEQVFLDAAE---------------------ASVYNVD 435

Query: 249 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN 307
           +S+NK+ + P  I      L+ L +  N L+ +P   F     +  L++S N +A LPE 
Sbjct: 436 ISKNKLGEVPSGITHLADQLTELNISFNLLKTIPM-FFSRFERISYLNISNNLLADLPE- 493

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI---PEGFKNLTSLTE 364
                L  L+EL +   QL+  P  +  L+ L IL    N ++ I     G   L  L  
Sbjct: 494 -VVGLLVTLRELNVANNQLKRIPPSVYELKGLEILLARDNKIEEIDATESGLAALPRLAT 552

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           LDL++NNI  +PP LGLL+ ++  L L GN  R  R  IL++GT++++ YL+D+IP
Sbjct: 553 LDLANNNIKQVPPVLGLLK-NITTLELIGNGFRQPRHQILEKGTESIMAYLRDRIP 607



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 165/372 (44%), Gaps = 87/372 (23%)

Query: 48  LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 107
           L  LDL  N +  I  ++     L    + +NAL++LP  +G L+KL  +++  N+L E 
Sbjct: 91  LTNLDLSSNALTCISENVKNLGDLTVLNLQDNALTSLPDGIGCLTKLTKINISRNKLTEL 150

Query: 108 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
                +L+ L VL+L++N  S +   +  +  L  L ++ N L +L         P  + 
Sbjct: 151 PESFFELKELKVLNLAHNDFSEIHSNVSDLIMLEVLDISFNSLNSL---------PGGIG 201

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
           +L                           V  ++L+L    L  +P++I     + K+DL
Sbjct: 202 FL---------------------------VRLQQLTLNNNRLIELPNDIVNLRNLHKMDL 234

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           ++N +++LPP +     L+ L +  N + + PD   T   +L  + + NN ++ +P+D  
Sbjct: 235 AKNDLKQLPPVMGELRKLECLYVQHNDVVELPD--FTGCDALKEIHISNNFIKSIPADFC 292

Query: 287 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
           +++P L++LDL  N                        ++ + P +I  L  L  LDLS 
Sbjct: 293 ENLPQLKVLDLRDN------------------------KIEKLPDEISMLASLTRLDLSN 328

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDR 406
           NS+ S+P     L  L                         +L+++GNP+RSIRR I+  
Sbjct: 329 NSISSLPSCLSTLAHLV------------------------SLQVEGNPIRSIRRDIIQC 364

Query: 407 GTKAVLKYLKDK 418
           GT+ +LK L+++
Sbjct: 365 GTQRILKTLRER 376



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 209/463 (45%), Gaps = 82/463 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L+++ N LT L +  I   T LT++  S+N L  +PE+   L  L  L+L  N    
Sbjct: 114 LTVLNLQDNALTSLPDG-IGCLTKLTKINISRNKLTELPESFFELKELKVLNLAHNDFSE 172

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           I S++S    L    +  N+L++LP  +G L +L  L L++N+L E   +   LR L  +
Sbjct: 173 IHSNVSDLIMLEVLDISFNSLNSLPGGIGFLVRLQQLTLNNNRLIELPNDIVNLRNLHKM 232

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL+ N L  LPP +G++  L  L +  N +                      LP+    +
Sbjct: 233 DLAKNDLKQLPPVMGELRKLECLYVQHNDV--------------------VELPDFTGCD 272

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL 238
           A                  KE+ +    + +IP++  E   ++  LDL  N I++LP E+
Sbjct: 273 A-----------------LKEIHISNNFIKSIPADFCENLPQLKVLDLRDNKIEKLPDEI 315

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV----------------- 281
           S  ASL  L LS N I   P + L++L+ L  L+++ NP+R +                 
Sbjct: 316 SMLASLTRLDLSNNSISSLP-SCLSTLAHLVSLQVEGNPIRSIRRDIIQCGTQRILKTLR 374

Query: 282 ----PSDG-------------FKDIPMLQ----ILDLSYNIASLPENPPFSSL-PHLQEL 319
               P  G             F D+  ++    ++  + N+  +PE     +    +  +
Sbjct: 375 ERDGPGKGGPENVKAPFEESTFPDVYQMKKGRSMIVSNKNLIDVPEQVFLDAAEASVYNV 434

Query: 320 YLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
            + + +L E P+ I  L  QL  L++S N L++IP  F     ++ L++S+N ++ LP  
Sbjct: 435 DISKNKLGEVPSGITHLADQLTELNISFNLLKTIPMFFSRFERISYLNISNNLLADLPEV 494

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
           +GLL  +L+ L +  N L+ I  ++ +     +L    +KI E
Sbjct: 495 VGLL-VTLRELNVANNQLKRIPPSVYELKGLEILLARDNKIEE 536


>gi|418688840|ref|ZP_13249975.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361998|gb|EJP17951.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 492

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 128/384 (33%), Positives = 197/384 (51%), Gaps = 17/384 (4%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           LI S+  L  +P+ I  L  L  LDL  N++ ++P  I    +L    +  N L+ALP E
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 146
           +G+L  L  L L++NQL     E  QL+ L +LDL NN L+ LP EIG++  L++L L+ 
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSY 170

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM-ATRLSVTSK------ 199
           N L TL   +       LL    S+L              L+++  ++L++  +      
Sbjct: 171 NQLTTLPKEIGKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQ 230

Query: 200 ---ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
              EL L    L+ +P EI +  ++  L L +N +  LP E+    +L++L LS N+IK 
Sbjct: 231 NLHELDLSHNQLTILPKEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKT 290

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
            P  I   L  L  L L NN L  +P +    +  LQ LDLS N + +LP+      L +
Sbjct: 291 IPKEI-EKLQKLQSLYLPNNQLTTLPQE-IGQLQNLQSLDLSTNRLTTLPQ--EIGHLQN 346

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           LQ+LYL   QL   P +I +L+ L+ L+L  N L ++ +  + L +L  LDL  N ++  
Sbjct: 347 LQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIF 406

Query: 376 PPELGLLEPSLQALRLDGNPLRSI 399
           P E+G L+ +LQ L L  N L ++
Sbjct: 407 PKEIGQLK-NLQVLDLGSNQLTTL 429



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 184/399 (46%), Gaps = 65/399 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT+L    I     L EL  S N L  +P+ IG L  L  L L+++++ +
Sbjct: 140 LQMLDLGNNQLTILPKE-IGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTT 198

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I    +L    +  + L+ LP E+GKL  L  LDL  NQL     E  QL +L  L
Sbjct: 199 LPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQKLQWL 258

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N L+ LP EIG++  L+ L L+ N ++T+   +       L K     LP N+   
Sbjct: 259 YLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEI-----EKLQKLQSLYLPNNQ--- 310

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                       L+ +P EI +   +  LDLS N +  LP E+ 
Sbjct: 311 ----------------------------LTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIG 342

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +LQ L L  N++   P+ I   L +L  L L NN L  +     K+I  LQ      
Sbjct: 343 HLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTLS----KEIEQLQ------ 391

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                          +L+ L LR  QL   P +I +L+ L++LDL  N L ++PEG   L
Sbjct: 392 ---------------NLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQL 436

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
            +L  LDL  N ++ LP E+G L+ +LQ L L+ N L S
Sbjct: 437 KNLQTLDLDSNQLTTLPQEIGQLQ-NLQELFLNNNQLSS 474



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 120/228 (52%), Gaps = 7/228 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E   T +DL T A +  +  + L L    L+ +P EI +   +  LDL  N +  LP 
Sbjct: 28  QAEEPGTYQDL-TKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPK 86

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    +LQ LIL  N++   P  I   L +L  L L+NN L  +P++  + +  LQ+LD
Sbjct: 87  EIGQLKNLQLLILYYNQLTALPKEI-GQLKNLKVLFLNNNQLTTLPTE-IRQLKNLQMLD 144

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N +  LP+      L +LQELYL   QL   P +I +L+ L++L L ++ L ++P+ 
Sbjct: 145 LGNNQLTILPK--EIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTTLPKE 202

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L +L  L L ++ ++ LP E+G L+ +L  L L  N L  + + I
Sbjct: 203 IGKLENLQLLSLYESQLTILPQEIGKLQ-NLHELDLSHNQLTILPKEI 249


>gi|407044559|gb|EKE42674.1| leucine-rich repeat containing protein [Entamoeba nuttalli P19]
          Length = 508

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 206/433 (47%), Gaps = 39/433 (9%)

Query: 14  LSNNLIASW-------TMLTELIASKN--LLNGMPETIGSLSRLIRLDLHQNRILSIPSS 64
           LSNN I S        + L EL   KN    +G+   I   S L RLD+  N++ SIP  
Sbjct: 68  LSNNRITSIPDSIQKASNLRELYLGKNNLFYDGISSEIKMCSNLQRLDISMNKLESIPPE 127

Query: 65  ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 123
           I    SL    +  N L +LP E+G L KL TL ++ N +++   E   LR L  LDLSN
Sbjct: 128 IGSLLSLQYLNISENNLKSLPPEIGMLDKLQTLLVNKNSIRKLPTEIGNLRSLYELDLSN 187

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N +  LP E+  M  L+ L +  N L      L N       K+L     +N        
Sbjct: 188 NQMDLLPEELSNMIALKILRIGFNKLSGNIDVLTN------FKFLVELDCQNNQGILELP 241

Query: 184 KEDLITMATRLSVTS---------------KELSL-EGMNLSAIPSEIWEAGEITKLDLS 227
             D +   TRL V +                EL++ + + +  +P EI+    + +LD  
Sbjct: 242 PLDSLQNLTRLVVKNLPITNIPGLSSLKMLCELNVRDNIKMKGMPEEIFNIASLQRLDFV 301

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKD--WPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
             +I  LPP ++S  +L  L L+ N + +  +P+ I ++L+++S L + NN +   P   
Sbjct: 302 GCNITVLPPNITSLTNLNILELAHNSLNESSFPEGI-STLTNISKLSISNNQIHSYPQ-C 359

Query: 286 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
             D+  +  LD+S N +  LPE   FS+L ++Q L +   +L   P  + RL  +  LD 
Sbjct: 360 LCDLTSIVELDVSNNLMVELPET--FSNLTNVQNLTVAGNRLNRLPESLGRLISVTYLDA 417

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
             N L+S+P    +L  L  L+L+ N I  LP E+G L+  LQ + L  NPL    + ++
Sbjct: 418 RNNQLKSLPASIGDLRQLNRLELTQNMIPVLPVEMGQLDGILQTIELTNNPLVVPPKEVV 477

Query: 405 DRGTKAVLKYLKD 417
            +G   + KYLKD
Sbjct: 478 IKGAHEICKYLKD 490



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 191/409 (46%), Gaps = 42/409 (10%)

Query: 2   SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 61
           S +++ G  L+     +  S  + T   AS+N    +PE +  +  L  L L  NRI SI
Sbjct: 19  SSIEISGKNLSEFPKQI--SKCVCTNFNASQNDFTSIPEDVCLMPNLEVLTLSNNRITSI 76

Query: 62  PSSISGCCSLAEFYMGNNAL--SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSV 118
           P SI    +L E Y+G N L    + +E+   S L  LD+  N+L+    E    L L  
Sbjct: 77  PDSIQKASNLRELYLGKNNLFYDGISSEIKMCSNLQRLDISMNKLESIPPEIGSLLSLQY 136

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           L++S N+L  LPPEIG +  L+ LL+  N +R L         P  +  LRS      + 
Sbjct: 137 LNISENNLKSLPPEIGMLDKLQTLLVNKNSIRKL---------PTEIGNLRSLY----EL 183

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPE 237
           + S  + DL+       +  K L +    LS     +     + +LD   N  I ELPP 
Sbjct: 184 DLSNNQMDLLPEELSNMIALKILRIGFNKLSGNIDVLTNFKFLVELDCQNNQGILELPP- 242

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL-------DNNPLRQVPSDGFKDIP 290
                SLQ   L+R  +K+ P   +T++  LS LK+       DN  ++ +P + F +I 
Sbjct: 243 ---LDSLQN--LTRLVVKNLP---ITNIPGLSSLKMLCELNVRDNIKMKGMPEEIF-NIA 293

Query: 291 MLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREA--PTDILRLQQLRILDLSQN 347
            LQ LD    NI  LP  P  +SL +L  L L    L E+  P  I  L  +  L +S N
Sbjct: 294 SLQRLDFVGCNITVLP--PNITSLTNLNILELAHNSLNESSFPEGISTLTNISKLSISNN 351

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            + S P+   +LTS+ ELD+S+N +  LP     L  ++Q L + GN L
Sbjct: 352 QIHSYPQCLCDLTSIVELDVSNNLMVELPETFSNLT-NVQNLTVAGNRL 399


>gi|418755283|ref|ZP_13311490.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964294|gb|EKO32184.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 557

 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 134/413 (32%), Positives = 196/413 (47%), Gaps = 38/413 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++E N+L VL    I +   L  L    N L  +P  IG L +L  L+L  N++  
Sbjct: 109 LEHLNLENNQLAVLVQE-IGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAV 167

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +   I     L    + NN L +LP ++GKL KL  L+L  NQL     E   L +L  L
Sbjct: 168 LVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWL 227

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NED 177
            L NN L+ LP EIGK+  L  L L  N L +L   +        L  + +RL     E 
Sbjct: 228 SLENNQLTVLPQEIGKLQKLEVLCLKNNKLGSLPQEIGTLRRLRFLSLVNNRLKTLPREI 287

Query: 178 SEASTTKEDLITMATRLSVTSKEL----SLEGMNLS-----AIPSEIWEAGEITKLDLSR 228
            +    K DL     +     KE+    +LEG+++S      +P+EIW+   +  L L  
Sbjct: 288 WKLQNLK-DLYLGDNQFRTLPKEIDQLQNLEGLDVSNNQLVTLPNEIWKLQNLKWLYLDD 346

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +  LP E+    +L++LILS N++   P  I T L  L  L L NN LR +P +    
Sbjct: 347 NQLTVLPQEIGQLENLESLILSNNQLTTLPQEIGT-LQKLQYLNLSNNQLRTLPQE-IGT 404

Query: 289 IPMLQILDLSYN-IASLPE--------------NPPFSSLPH-------LQELYLRRMQL 326
           +  L+ L+L +N +A+LP+              N    +LP        L+ LYL+  +L
Sbjct: 405 LQELEWLNLEHNQLAALPQEIDQLQNLEDLILSNNRLKTLPKEIWKLRKLEWLYLKNNKL 464

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
              P +I +LQ L  LDLS N L+++P     L SL +LDLS N  +  P E+
Sbjct: 465 GSLPKEIDQLQNLEYLDLSNNQLRTLPNEIGQLQSLEDLDLSGNPFATFPKEI 517



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 194/415 (46%), Gaps = 18/415 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL++  N+L+VL    I +   L  L    N L  +P  IG L +L  L+L  N++  
Sbjct: 63  LEKLNLVNNQLSVLVQE-IGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLENNQLAV 121

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +   I     L    + NN L +LP ++GKL KL  L+L  NQL     E   L +L  L
Sbjct: 122 LVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWL 181

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L NN L  LP +IGK+  L  L L  N L  L   +        L    ++L       
Sbjct: 182 SLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQEI 241

Query: 180 ASTTKEDLITMA-TRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
               K +++ +   +L    +E         LSL    L  +P EIW+   +  L L  N
Sbjct: 242 GKLQKLEVLCLKNNKLGSLPQEIGTLRRLRFLSLVNNRLKTLPREIWKLQNLKDLYLGDN 301

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
             + LP E+    +L+ L +S N++   P+ I   L +L  L LD+N L  +P +    +
Sbjct: 302 QFRTLPKEIDQLQNLEGLDVSNNQLVTLPNEI-WKLQNLKWLYLDDNQLTVLPQE-IGQL 359

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L+ L LS N + +LP+     +L  LQ L L   QLR  P +I  LQ+L  L+L  N 
Sbjct: 360 ENLESLILSNNQLTTLPQ--EIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQ 417

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L ++P+    L +L +L LS+N +  LP E+  L   L+ L L  N L S+ + I
Sbjct: 418 LAALPQEIDQLQNLEDLILSNNRLKTLPKEIWKLR-KLEWLYLKNNKLGSLPKEI 471



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 199/403 (49%), Gaps = 23/403 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+L  L N  I     L +L    N L+ + + IG+L +L  L L  NR+ S+P+
Sbjct: 43  LDLSDNQLATLPNE-IGKLENLEKLNLVNNQLSVLVQEIGTLQKLEWLSLKNNRLESLPN 101

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L    + NN L+ L  E+G L KL  L L +N+L+    +  +LR L  L+L 
Sbjct: 102 KIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLE 161

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEAS 181
           +N L+ L  EIG +  L  L L  N L +L         P  +  LR     N E ++ +
Sbjct: 162 HNQLAVLVQEIGTLQKLEWLSLKNNRLESL---------PNKIGKLRKLEHLNLEHNQLA 212

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
              +++ T+        + LSLE   L+ +P EI +  ++  L L  N +  LP E+ + 
Sbjct: 213 VLVQEIGTLQ-----KLEWLSLENNQLTVLPQEIGKLQKLEVLCLKNNKLGSLPQEIGTL 267

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 300
             L+ L L  N++K  P  I   L +L  L L +N  R +P +    +  L+ LD+S N 
Sbjct: 268 RRLRFLSLVNNRLKTLPREI-WKLQNLKDLYLGDNQFRTLPKE-IDQLQNLEGLDVSNNQ 325

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
           + +LP       L +L+ LYL   QL   P +I +L+ L  L LS N L ++P+    L 
Sbjct: 326 LVTLPN--EIWKLQNLKWLYLDDNQLTVLPQEIGQLENLESLILSNNQLTTLPQEIGTLQ 383

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            L  L+LS+N +  LP E+G L+  L+ L L+ N L ++ + I
Sbjct: 384 KLQYLNLSNNQLRTLPQEIGTLQ-ELEWLNLEHNQLAALPQEI 425



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 177/388 (45%), Gaps = 48/388 (12%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N L  +P  IG L  L +L+L  N++  +   I     L    + NN L +LP ++GK
Sbjct: 46  SDNQLATLPNEIGKLENLEKLNLVNNQLSVLVQEIGTLQKLEWLSLKNNRLESLPNKIGK 105

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L KL  L+L +NQL     E   L +L  L L NN L  LP +IGK+  L  L L  N L
Sbjct: 106 LRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQL 165

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMN 207
             L   +    T   L++L            S     L ++  ++    K   L+LE   
Sbjct: 166 AVLVQEI---GTLQKLEWL------------SLKNNRLESLPNKIGKLRKLEHLNLEHNQ 210

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+ +  EI    ++  L L  N +  LP E+     L+ L L  NK+   P  I T L  
Sbjct: 211 LAVLVQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKLEVLCLKNNKLGSLPQEIGT-LRR 269

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L  L L NN L+ +P + +K                         L +L++LYL   Q R
Sbjct: 270 LRFLSLVNNRLKTLPREIWK-------------------------LQNLKDLYLGDNQFR 304

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
             P +I +LQ L  LD+S N L ++P     L +L  L L DN ++ LP E+G LE +L+
Sbjct: 305 TLPKEIDQLQNLEGLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLE-NLE 363

Query: 388 ALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           +L L  N L ++ + I   GT   L+YL
Sbjct: 364 SLILSNNQLTTLPQEI---GTLQKLQYL 388



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           +RILDLS N L ++P     L +L +L+L +N +S L  E+G L+  L+ L L  N L S
Sbjct: 40  VRILDLSDNQLATLPNEIGKLENLEKLNLVNNQLSVLVQEIGTLQ-KLEWLSLKNNRLES 98

Query: 399 IRRTI 403
           +   I
Sbjct: 99  LPNKI 103


>gi|418744965|ref|ZP_13301310.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794296|gb|EKR92206.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 465

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 195/399 (48%), Gaps = 42/399 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           + +   L EL    N L  +P  IG L  L  L L+ NR+ ++P  +    +L E  + N
Sbjct: 57  VGTLQNLRELNLENNQLATLPNEIGQLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLEN 116

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N L+ LP  +G+L  L  L+LH+N+LK                       LP EIGK+  
Sbjct: 117 NQLATLPNGIGQLENLQVLNLHNNRLK----------------------SLPKEIGKLQK 154

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL---PENEDSEASTTKEDLITMATRLS 195
           L++L L GN LRTL   +        L   R +L   PE      S  +  LI  + +L 
Sbjct: 155 LKRLYLGGNQLRTLPQEIETLQDLEELHLSRDQLKTFPEEIGKLRSLKR--LILDSNQLV 212

Query: 196 VTSKELS---------LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
           V S+E+          LE   L+ +P+EI +   + +L+LS N +  LP E+ +  +LQ 
Sbjct: 213 VLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQN 272

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           L L  N+ +  P  I   L +L  L L +N L  +P +  K +  L+ L L  N + +LP
Sbjct: 273 LHLYSNQFRTLPKQI-WQLQNLQDLHLAHNQLTVLPQEIGK-LEKLEDLYLEDNQLTTLP 330

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
           +      L  L+ L L   QLR  P +I +L++L+ LDLS N L+ +P+    L  L  L
Sbjct: 331 K--EIWKLEKLKYLDLANNQLRLLPEEIGKLEKLKYLDLSNNQLRLLPQKIGKLEKLKYL 388

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
           DLS+N ++ LP E+G LE  L+ L L GNP  +  + I+
Sbjct: 389 DLSNNQLATLPKEIGKLE-KLEDLDLSGNPFTTFPKEIV 426



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 122/378 (32%), Positives = 179/378 (47%), Gaps = 24/378 (6%)

Query: 41  TIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 99
               L    + D   N++   + +++     +   ++  + L  L  E+G L  L  L+L
Sbjct: 9   VFAILCFFYKCDAEDNKVYRDLDAALKNPMDVKSLHLNRDQLRTLSQEVGTLQNLRELNL 68

Query: 100 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
            +NQL     E  QL  L VL L NN L  LP E+G +  LR+L L  N L TL + +  
Sbjct: 69  ENNQLATLPNEIGQLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQ 128

Query: 159 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 218
                +L    +RL        S  KE  I    +L    K L L G  L  +P EI   
Sbjct: 129 LENLQVLNLHNNRL-------KSLPKE--IGKLQKL----KRLYLGGNQLRTLPQEIETL 175

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
            ++ +L LSR+ ++  P E+    SL+ LIL  N++      I   L SL  L L+NN L
Sbjct: 176 QDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEI-GKLRSLERLILENNQL 234

Query: 279 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
             +P++  K +  L+ L+LS N + +LP+     +L +LQ L+L   Q R  P  I +LQ
Sbjct: 235 ATLPNEIGK-LQNLEELNLSNNQLVTLPQ--EIGALENLQNLHLYSNQFRTLPKQIWQLQ 291

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
            L+ L L+ N L  +P+    L  L +L L DN ++ LP E+  LE  L+ L L  N LR
Sbjct: 292 NLQDLHLAHNQLTVLPQEIGKLEKLEDLYLEDNQLTTLPKEIWKLE-KLKYLDLANNQLR 350

Query: 398 SIRRTILDRGTKAVLKYL 415
            +   I   G    LKYL
Sbjct: 351 LLPEEI---GKLEKLKYL 365


>gi|260788664|ref|XP_002589369.1| hypothetical protein BRAFLDRAFT_77815 [Branchiostoma floridae]
 gi|229274546|gb|EEN45380.1| hypothetical protein BRAFLDRAFT_77815 [Branchiostoma floridae]
          Length = 869

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 199/423 (47%), Gaps = 32/423 (7%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           KLD+    LT +   +    T L  L  S+N L  +PE IG L +L RLD + N +  +P
Sbjct: 32  KLDLSNQGLTSIPEEVF-DITDLEFLDVSRNKLTSIPEAIGRLQKLSRLDAYSNMLTCLP 90

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
            +I     L   Y+  N L+ LP  + KL KL  L ++ NQL E     C L  L VL +
Sbjct: 91  QAIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIYDNQLTEVPSGVCSLPNLEVLSV 150

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP-------- 173
           SNN LS  PP + K+  LRKL +  N L  + S + + P   +L    ++L         
Sbjct: 151 SNNKLSTFPPGVEKLQKLRKLFIKDNQLTEVPSGVCSLPNLEVLNVSNNKLSTFPPGVEK 210

Query: 174 ----------ENEDSEASTTK------EDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 217
                     +N+ +E  +        E L     +LS     +      LS  P  + +
Sbjct: 211 LQKLKELGIYDNQLTEVPSGVCSLPNLEVLNVYNNKLSTFPPGVKCHNNKLSTFPPGVEK 270

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
             ++ +L +  N + E+P  + S  +L+ L    NK+  +P  +   L  L  L + +N 
Sbjct: 271 LQKLKELGIYDNQLTEVPSGVCSLPNLEKLSAYNNKLSTFPPGV-EKLQKLRELYIYDNQ 329

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
           L +VPS G   +P L++L +  N +++ P  P    L  L+ELY+   QL E P+ +  L
Sbjct: 330 LTEVPS-GVCSLPNLEMLGVYNNKLSTFP--PGVEKLQKLRELYIYDNQLTEVPSGVCSL 386

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
             L +L +  N L + P G + L  L +L ++DN ++ +P  +  L P+L+ L +  NP+
Sbjct: 387 PNLEMLSVCNNKLSTFPPGVEKLQKLRKLYINDNQLTEVPSCVCSL-PNLEVLSVGPNPI 445

Query: 397 RSI 399
           R +
Sbjct: 446 RRL 448



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 205/459 (44%), Gaps = 62/459 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL ++ N+LT + +  + S   L  L  S N L+  P  +  L +L  L ++ N++  
Sbjct: 168 LRKLFIKDNQLTEVPSG-VCSLPNLEVLNVSNNKLSTFPPGVEKLQKLKELGIYDNQLTE 226

Query: 61  IPSSISGCCSL-------------AEFYMG----NNALSALPAELGKLSKLGTLDLHSNQ 103
           +PS   G CSL             + F  G    NN LS  P  + KL KL  L ++ NQ
Sbjct: 227 VPS---GVCSLPNLEVLNVYNNKLSTFPPGVKCHNNKLSTFPPGVEKLQKLKELGIYDNQ 283

Query: 104 LKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 162
           L E     C L  L  L   NN LS  PP + K+  LR+L +  N L  + S + + P  
Sbjct: 284 LTEVPSGVCSLPNLEKLSAYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNL 343

Query: 163 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 222
            +L    ++L     S      E L  +        +EL +    L+ +PS +     + 
Sbjct: 344 EMLGVYNNKL-----STFPPGVEKLQKL--------RELYIYDNQLTEVPSGVCSLPNLE 390

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
            L +  N +   PP +     L+ L ++ N++ + P  +  SL +L  L +  NP+R++P
Sbjct: 391 MLSVCNNKLSTFPPGVEKLQKLRKLYINDNQLTEVPSCV-CSLPNLEVLSVGPNPIRRLP 449

Query: 283 SD---------------GFKDIP--MLQILDLSYNIAS------LPENPPFSSLPHLQEL 319
            D                F + P  +LQ+  L    A       +P+     +L HL  L
Sbjct: 450 DDVTRLARLKTLSVPGCQFDEFPRQVLQLKTLEELYAGGCKFDIVPDE--VGNLQHLWHL 507

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            L    LR  P+ +  L  LR++ L++N   + PE    L ++ +L++ +NNI+ LP  L
Sbjct: 508 SLDINLLRTLPSTMSHLHNLRVVRLNKNKFDTFPEVLCELPAMEKLNIRNNNITRLPTAL 567

Query: 380 GLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
              +  L+ L + GNP+    + +  +GT A++ +LK +
Sbjct: 568 HRAD-KLKDLNVSGNPMSYPPQEVRKQGTGAIMAFLKQE 605



 Score = 44.7 bits (104), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 25/235 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT + +  + S   L  L    N +  +P+ +  L+RL  L +   +   
Sbjct: 412 LRKLYINDNQLTEVPS-CVCSLPNLEVLSVGPNPIRRLPDDVTRLARLKTLSVPGCQFDE 470

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL--------------------- 99
            P  +    +L E Y G      +P E+G L  L  L L                     
Sbjct: 471 FPRQVLQLKTLEELYAGGCKFDIVPDEVGNLQHLWHLSLDINLLRTLPSTMSHLHNLRVV 530

Query: 100 --HSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
             + N+   +    C+L  +  L++ NN+++ LP  + +   L+ L ++GNP+      +
Sbjct: 531 RLNKNKFDTFPEVLCELPAMEKLNIRNNNITRLPTALHRADKLKDLNVSGNPMSYPPQEV 590

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
               T A++ +L+    ++E   ++  +  +    T+    ++ L L    + AI
Sbjct: 591 RKQGTGAIMAFLKQEAEKDERILSAFNRLSVRMSQTQWKPLARSLGLSNRAVDAI 645


>gi|220907479|ref|YP_002482790.1| hypothetical protein Cyan7425_2066 [Cyanothece sp. PCC 7425]
 gi|219864090|gb|ACL44429.1| leucine-rich repeat protein [Cyanothece sp. PCC 7425]
          Length = 508

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 133/392 (33%), Positives = 194/392 (49%), Gaps = 45/392 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+  N LT L    I++ T L +L    N L+ +P  I SL++L  LDL +N++ +
Sbjct: 43  LQKLDLSNNYLTTLPEE-ISALTQLRDLDLFSNSLSALPLGICSLTQLEVLDLIENQLTN 101

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVL 119
           +P +IS    L +  + NN  ++LP  +G L++L  L LH+N+L +   E  C + L  L
Sbjct: 102 LPEAISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLHANKLTKLPAEIGCLVHLKEL 161

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DLSNN+ + LP  I  +  L+ L L+ N                      + LPE  +  
Sbjct: 162 DLSNNAFTDLPVAIANLNQLQTLDLSRNHF--------------------TDLPEAINGL 201

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           A   K D                L    L+AIP+ I    ++  LDL  N I ELP  + 
Sbjct: 202 AHLCKLD----------------LSYNKLTAIPAVISSLSQLQTLDLCANQITELPELIG 245

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP-SDGFKDIPMLQILDLS 298
           SC  LQ L LSRN + +   AI  SL++L  L L  N L  +P S G+  +  LQ L + 
Sbjct: 246 SCIELQELSLSRNLLINLSAAI-GSLTNLKVLDLSQNQLSHLPKSIGY--LTQLQKLYIE 302

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + +LPE+     L +LQ  +L R QL   P  I  L QLR L   QN L ++P   +
Sbjct: 303 RNKLITLPES--IGGLSNLQTFHLYRNQLTILPESIGDLIQLRELFAYQNQLTNLPGTIR 360

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
            LT L +L+LS N ++ LP  L +L  +L +L
Sbjct: 361 FLTRLEKLNLSGNQLATLPEGLTVLCEALSSL 392



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 135/416 (32%), Positives = 182/416 (43%), Gaps = 77/416 (18%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  NKLT L    I     L EL  S N    +P  I +L++L  LDL +N    
Sbjct: 135 LQVLGLHANKLTKLPAE-IGCLVHLKELDLSNNAFTDLPVAIANLNQLQTLDLSRNHFTD 193

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY------CVEACQL 114
           +P +I+G   L +  +  N L+A+PA +  LS+L TLDL +NQ+ E       C+E  +L
Sbjct: 194 LPEAINGLAHLCKLDLSYNKLTAIPAVISSLSQLQTLDLCANQITELPELIGSCIELQEL 253

Query: 115 RLS------------------VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS- 155
            LS                  VLDLS N LS LP  IG +T L+KL +  N L TL  S 
Sbjct: 254 SLSRNLLINLSAAIGSLTNLKVLDLSQNQLSHLPKSIGYLTQLQKLYIERNKLITLPESI 313

Query: 156 --LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
             L N  T  L +   + LPE        +  DLI +        +EL      L+ +P 
Sbjct: 314 GGLSNLQTFHLYRNQLTILPE--------SIGDLIQL--------RELFAYQNQLTNLPG 357

Query: 214 EIWEAGEITKLDLSRNSIQELPP-------ELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            I     + KL+LS N +  LP         LSS   L  L LS N+I   P+AI  +L+
Sbjct: 358 TIRFLTRLEKLNLSGNQLATLPEGLTVLCEALSSLLQLHYLNLSHNQIAQLPEAI-GALT 416

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
            L  L L  N L+ +P+                            SL  LQ LY+    L
Sbjct: 417 QLKELVLVCNHLKDLPAS-------------------------IGSLTQLQFLYVSHNPL 451

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
              P  I  L QL+ L+L  N L  +P     LT L EL LS+N  + LP  +G L
Sbjct: 452 THLPETINGLSQLQKLNLEHNHLSDLPAAIAALTLLKELILSENKFTVLPTAIGAL 507


>gi|170029739|ref|XP_001842749.1| leucine-rich repeat-containing protein 40 [Culex quinquefasciatus]
 gi|167864068|gb|EDS27451.1| leucine-rich repeat-containing protein 40 [Culex quinquefasciatus]
          Length = 612

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 217/463 (46%), Gaps = 92/463 (19%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI------------- 65
           ++   ML  L  S N LN +P  IG L RL +L L+ NR+  +P+ I             
Sbjct: 182 VSDLIMLEVLDISFNSLNSLPGGIGFLVRLQQLTLNNNRLTELPNDIVNLRNLHKLDLAK 241

Query: 66  --------------------------------SGCCSLAEFYMGNNALSALPAELGK-LS 92
                                           +GC +L E ++ NN + ++PA+  + L 
Sbjct: 242 NDLKLLPPVMGELRKLECLYVQHNDVGELPDFTGCDALKELHISNNFIKSIPADFCENLP 301

Query: 93  KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
           +L  LDL  N++++   E   L  L+ LDLSNNS+S LP  +  +  L  L + GNP+R+
Sbjct: 302 QLKILDLRDNKIEKLPDEISMLASLTRLDLSNNSISSLPSCLSTLAHLVSLQVDGNPIRS 361

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEA------STTKEDLITMATRLSVTSKELSLEG 205
           +R  ++   T  +LK L+ R    + SE        +T  D+  M        + + +  
Sbjct: 362 IRRDIIQCGTQRILKTLKDRDGPGKSSEKVRVPFEESTFPDVYQMK-----KGRSMIVSN 416

Query: 206 MNLSAIPSEIW-EAGE--ITKLDLSRNSIQELPPELSSCASLQT-LILSRNKIKDWPDAI 261
            NL  IP +++ +A E  +  +D+S+N + E+P  L+  AS+ T L +S N +K  P   
Sbjct: 417 KNLIDIPEQVFLDAMEASVYNIDISKNKLMEIPAGLTHLASIMTELNVSFNALKTIP-MF 475

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYL 321
            +    +S L + NN L  +P          +++ L               L  L+EL +
Sbjct: 476 FSQFERISYLNVSNNQLTDLP----------EVVGL---------------LVTLRELNV 510

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQSI---PEGFKNLTSLTELDLSDNNISALPPE 378
              QL++ P  +  L+ L IL    N ++ +     G   L  L  LD+++NNI  +PP 
Sbjct: 511 ANNQLKQIPPCVYELKGLEILLARGNKIEELDASEHGLGALPRLATLDVANNNIKQVPPI 570

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
           LG+L+ ++  L + GN  R  R  IL++GT++++ YL+D+IP+
Sbjct: 571 LGMLK-NITTLEIIGNAFRQPRHQILEKGTESIMAYLRDRIPQ 612



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 163/372 (43%), Gaps = 87/372 (23%)

Query: 48  LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 107
           L  LDL  N + SI  ++     L    + +NAL+ALP  +G L+KL  L L  N+L E 
Sbjct: 96  LTTLDLSSNTLTSISENVKNLGDLTVLNLQDNALTALPEGIGCLTKLTKLSLGRNKLSEL 155

Query: 108 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
                 LR L  L+LS+N  + +   +  +  L  L ++ N L +L         P  + 
Sbjct: 156 PESFFNLRELKSLNLSHNDFAEIHANVSDLIMLEVLDISFNSLNSL---------PGGIG 206

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
           +L                           V  ++L+L    L+ +P++I     + KLDL
Sbjct: 207 FL---------------------------VRLQQLTLNNNRLTELPNDIVNLRNLHKLDL 239

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           ++N ++ LPP +     L+ L +  N + + PD   T   +L  L + NN ++ +P+D  
Sbjct: 240 AKNDLKLLPPVMGELRKLECLYVQHNDVGELPD--FTGCDALKELHISNNFIKSIPADFC 297

Query: 287 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
           +++P L+ILDL  N                        ++ + P +I  L  L  LDLS 
Sbjct: 298 ENLPQLKILDLRDN------------------------KIEKLPDEISMLASLTRLDLSN 333

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDR 406
           NS+ S+P     L  L                         +L++DGNP+RSIRR I+  
Sbjct: 334 NSISSLPSCLSTLAHLV------------------------SLQVDGNPIRSIRRDIIQC 369

Query: 407 GTKAVLKYLKDK 418
           GT+ +LK LKD+
Sbjct: 370 GTQRILKTLKDR 381



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 199/440 (45%), Gaps = 81/440 (18%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L+++ N LT L    I   T LT+L   +N L+ +PE+  +L  L  L+L  N    
Sbjct: 119 LTVLNLQDNALTALPEG-IGCLTKLTKLSLGRNKLSELPESFFNLRELKSLNLSHNDFAE 177

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           I +++S    L    +  N+L++LP  +G L +L  L L++N+L E   +   LR L  L
Sbjct: 178 IHANVSDLIMLEVLDISFNSLNSLPGGIGFLVRLQQLTLNNNRLTELPNDIVNLRNLHKL 237

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL+ N L  LPP +G++  L  L +  N +                      LP+    +
Sbjct: 238 DLAKNDLKLLPPVMGELRKLECLYVQHNDV--------------------GELPDFTGCD 277

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL 238
           A                  KEL +    + +IP++  E   ++  LDL  N I++LP E+
Sbjct: 278 A-----------------LKELHISNNFIKSIPADFCENLPQLKILDLRDNKIEKLPDEI 320

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-------------- 284
           S  ASL  L LS N I   P + L++L+ L  L++D NP+R +  D              
Sbjct: 321 SMLASLTRLDLSNNSISSLP-SCLSTLAHLVSLQVDGNPIRSIRRDIIQCGTQRILKTLK 379

Query: 285 -------------------GFKDIPMLQ----ILDLSYNIASLPENPPFSSL-PHLQELY 320
                               F D+  ++    ++  + N+  +PE     ++   +  + 
Sbjct: 380 DRDGPGKSSEKVRVPFEESTFPDVYQMKKGRSMIVSNKNLIDIPEQVFLDAMEASVYNID 439

Query: 321 LRRMQLREAPTDILRLQQLRI-LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
           + + +L E P  +  L  +   L++S N+L++IP  F     ++ L++S+N ++ LP  +
Sbjct: 440 ISKNKLMEIPAGLTHLASIMTELNVSFNALKTIPMFFSQFERISYLNVSNNQLTDLPEVV 499

Query: 380 GLLEPSLQALRLDGNPLRSI 399
           GLL  +L+ L +  N L+ I
Sbjct: 500 GLL-VTLRELNVANNQLKQI 518



 Score = 42.7 bits (99), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 30/46 (65%)

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
           + L  LDLS N+L SI E  KNL  LT L+L DN ++ALP  +G L
Sbjct: 94  KSLTTLDLSSNTLTSISENVKNLGDLTVLNLQDNALTALPEGIGCL 139


>gi|456875008|gb|EMF90242.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 557

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 138/430 (32%), Positives = 212/430 (49%), Gaps = 27/430 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT+     I +   L  L  + N L  +P+ I +L +L  L L +N++ +
Sbjct: 40  VRNLDLVNNQLTIFPRE-IGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLAT 98

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I     L   Y+G N L+ +P E+G L  L  L L++NQL     E   L+ L  L
Sbjct: 99  LPKEIGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEEL 158

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR------SRLP 173
           +L+NN L  LP EIG +  L+ L +  N L TL   +    T   LKYLR      + LP
Sbjct: 159 NLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEI---GTLQNLKYLRLAYNQLTTLP 215

Query: 174 EN----ED-SEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDL 226
           E     E+  + +     L+T+   +      + L+LE   L  +P EI    ++  L L
Sbjct: 216 EEIGRLENLQDLNVFNNQLVTLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYL 275

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           + N +  LP E+     L+ L L+ N++K  P  I   L +L  L L+NN L   P +  
Sbjct: 276 TNNQLATLPQEIGKLQRLEWLGLTNNQLKSLPQEI-GKLQNLKELILENNRLESFPKE-I 333

Query: 287 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
             +P LQ L L YN   +LP+     +L  L  L L   QL   P +I RL++L  L+L 
Sbjct: 334 GTLPNLQRLHLEYNRFTTLPQE--IGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLY 391

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
            N L ++P+    L  L  L L++N ++ LP E+G L+ +L+ L L+ N L ++   I  
Sbjct: 392 NNRLATLPKEIGTLQKLQHLYLANNQLATLPKEIGQLQ-NLKDLDLEYNQLATLPEAI-- 448

Query: 406 RGTKAVLKYL 415
            GT   L++L
Sbjct: 449 -GTLQRLEWL 457



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 133/406 (32%), Positives = 191/406 (47%), Gaps = 45/406 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L+V  N+L  L    I +   L  L  + N L  +PE IG L  L  L++  N++++
Sbjct: 178 LQDLNVFNNQLITLPQE-IGTLQNLKYLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLVT 236

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I    +L    + NN L  LP E+G L KL  L L +NQL     E  +L RL  L
Sbjct: 237 LPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPQEIGKLQRLEWL 296

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L+NN L  LP EIGK+  L++L+L  N L +    +  G  P L               
Sbjct: 297 GLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEI--GTLPNL--------------- 339

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              + L LE    + +P EI     +  L+L  N +  LP E+ 
Sbjct: 340 -------------------QRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIG 380

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               L+ L L  N++   P  I T L  L  L L NN L  +P +    +  L+ LDL Y
Sbjct: 381 RLERLEWLNLYNNRLATLPKEIGT-LQKLQHLYLANNQLATLPKE-IGQLQNLKDLDLEY 438

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +A+LPE     +L  L+ L L+  QL   P +I  LQ++  L+L+ N L+++P+G   
Sbjct: 439 NQLATLPE--AIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRTLPQGIGQ 496

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP-LRSIRRTI 403
           L SL +LDLS N  +  P E+  L+  LQ L+L   P L S R TI
Sbjct: 497 LQSLKDLDLSGNPFTTFPKEIVGLK-HLQILKLKNIPALLSERETI 541


>gi|340727641|ref|XP_003402148.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 40-like [Bombus terrestris]
          Length = 604

 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 134/434 (30%), Positives = 223/434 (51%), Gaps = 46/434 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N L  L  +L  +   L +L AS N L  +P  +G L ++  + L  N++ +
Sbjct: 202 LTSLDLGHNMLKELPPDL-TNMRALQKLNASYNQLEMLP-PLGELRKVETVMLQSNKLTT 259

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 118
            P  ISGC  L   ++ +N ++ +    L  + +L TL L +NQ++    E  +L  L +
Sbjct: 260 FPD-ISGCILLRVLHLADNNITEIDMSCLEGVGQLKTLTLGNNQIETIPEEIIKLVYLEI 318

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-----SRLP 173
            DLS+N L+ +P  IG +  L++ ++ GN ++ +R+ ++   T  +LK++R     + L 
Sbjct: 319 FDLSHNKLTLIPKYIGLLPNLKQFVIDGNDIQNVRTDIIRCGTSRILKHIRQGIKSTNLD 378

Query: 174 ENEDSEASTTKE---DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
             E   A T+     D  TM +     +K LSL G NL+ +P E+ E             
Sbjct: 379 VKEHVVADTSANIYPDRYTMQS-----TKLLSLAGQNLTELPLEVLE------------- 420

Query: 231 IQELPPELSSC-ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
                   ++C A + T+ LSRNK+    D  L  +  ++ LKL +N L  +P    +  
Sbjct: 421 --------NACKADVGTVDLSRNKLSILSDE-LCIIERIADLKLTSNQLTHIPEWIGEKY 471

Query: 290 PMLQILDLSYNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQILDLS N+  SLP N     L +LQEL +   + +E P  +  +  L IL  + N 
Sbjct: 472 KYLQILDLSRNLLQSLPIN--LGLLKYLQELNISFNRYKEIPESVYAINSLEILIANDNL 529

Query: 349 LQSIPE-GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
           +  I    F+ +  L  L+L++NNI  +PPELG L+ +L+ L L GN  +  R+ IL + 
Sbjct: 530 ITDIDVPSFQKIKKLAILNLANNNIGFVPPELGTLK-NLRNLSLSGNCFKQPRQAILAKS 588

Query: 408 TKAVLKYLKDKIPE 421
           T+ +L YL+++IP+
Sbjct: 589 TEEILAYLRNRIPQ 602



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 180/423 (42%), Gaps = 51/423 (12%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I + T LT L    N L  +P  IG+L +L  L+L  N++   P        L E  + N
Sbjct: 104 IENLTELTTLNLHNNQLEDLPAEIGNLKKLNILNLSNNKLEKFPHEFYKLNELHELNLKN 163

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N++  L   +G    L  LDL  N L E  +    L RL+ LDL +N L  LPP++  M 
Sbjct: 164 NSIKELDPAVGDFVMLTYLDLSYNNLIELPIGMGYLVRLTSLDLGHNMLKELPPDLTNMR 223

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L+KL  + N L  L       P    L+ + + + +   S   TT  D I+    L V 
Sbjct: 224 ALQKLNASYNQLEML-------PPLGELRKVETVMLQ---SNKLTTFPD-ISGCILLRV- 271

Query: 198 SKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
              L L   N++ I     E  G++  L L  N I+ +P E+     L+   LS NK+  
Sbjct: 272 ---LHLADNNITEIDMSCLEGVGQLKTLTLGNNQIETIPEEIIKLVYLEIFDLSHNKLTL 328

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSD---------------GFK----DIPMLQILDL 297
            P  I   L +L    +D N ++ V +D               G K    D+    + D 
Sbjct: 329 IPKYI-GLLPNLKQFVIDGNDIQNVRTDIIRCGTSRILKHIRQGIKSTNLDVKEHVVADT 387

Query: 298 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR---LQQLRILDLSQNSLQSIPE 354
           S NI      P   ++   + L L    L E P ++L       +  +DLS+N L  + +
Sbjct: 388 SANIY-----PDRYTMQSTKLLSLAGQNLTELPLEVLENACKADVGTVDLSRNKLSILSD 442

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
               +  + +L L+ N ++ +P  +G     LQ L L  N L+S+   +       +LKY
Sbjct: 443 ELCIIERIADLKLTSNQLTHIPEWIGEKYKYLQILDLSRNLLQSLPINL------GLLKY 496

Query: 415 LKD 417
           L++
Sbjct: 497 LQE 499



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 105/225 (46%), Gaps = 26/225 (11%)

Query: 165 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
           L   + R   ++++E S    ++I ++ R    S  L+L    L  +P+ +W        
Sbjct: 11  LAVFKKRTKNDDNAELS----EIIIISAR---KSGNLNLSSRGLFTVPNRVWNIN----- 58

Query: 225 DLSRNSIQELPPELSSCAS---------LQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
           DL+   I++L  EL              LQTL LS N +K   D  + +L+ L+ L L N
Sbjct: 59  DLTEEEIRDLHFELDYVQETERWWEQEPLQTLDLSCNTLKKI-DPQIENLTELTTLNLHN 117

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N L  +P++   ++  L IL+LS N +   P    F  L  L EL L+   ++E    + 
Sbjct: 118 NQLEDLPAE-IGNLKKLNILNLSNNKLEKFPH--EFYKLNELHELNLKNNSIKELDPAVG 174

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
               L  LDLS N+L  +P G   L  LT LDL  N +  LPP+L
Sbjct: 175 DFVMLTYLDLSYNNLIELPIGMGYLVRLTSLDLGHNMLKELPPDL 219



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 1/61 (1%)

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L+ LDLS N+L+ I    +NLT LT L+L +N +  LP E+G L+  L  L L  N L  
Sbjct: 87  LQTLDLSCNTLKKIDPQIENLTELTTLNLHNNQLEDLPAEIGNLK-KLNILNLSNNKLEK 145

Query: 399 I 399
            
Sbjct: 146 F 146


>gi|195109404|ref|XP_001999277.1| GI24424 [Drosophila mojavensis]
 gi|193915871|gb|EDW14738.1| GI24424 [Drosophila mojavensis]
          Length = 694

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 141/495 (28%), Positives = 216/495 (43%), Gaps = 107/495 (21%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++  N+   L N  I++  ML  L A  N +N +P  IG L RL  L L  N I  
Sbjct: 231 LRHLNISHNEFEEL-NPDISNLHMLEFLDAGNNNINSLPGGIGFLVRLTALLLANNHIKE 289

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSK--------------------------- 93
           +P  I    SL +  +  N L ALP ++G L K                           
Sbjct: 290 LPPDIVYMRSLQKLDLMKNDLVALPEDMGLLRKLQFLYVQHNDIKELPNFEGNEMLSELH 349

Query: 94  -------------------LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEI 133
                              L  LDL  N++ +   E C LR L+ LD++NNS+S LP  +
Sbjct: 350 ASNNYIDHVPKELCENLPHLKILDLRDNKITQLPDEVCLLRNLNRLDITNNSISVLPVTL 409

Query: 134 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL------ 187
             +  L  L + GNP++T+R  ++   T  +LK L  R    E ++     EDL      
Sbjct: 410 STLAHLISLQVDGNPIKTIRRDILQCGTARILKTLHDRAQAKERADGGA--EDLPCSSSA 467

Query: 188 ----------------ITMATRLSVTSK-ELSLEGMNLSAIPSEIWEAG---EITKLDLS 227
                           +T   +L  T    ++LEG  L+ +P+ ++E     ++  +D +
Sbjct: 468 AGSQLSMQQQQQLPANMTDKYKLRHTRTLAVNLEG--LTDVPTHVFELASEEKVHVVDFA 525

Query: 228 RNSIQELPPELSSCASLQT-LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           RN +  LP  L   + L T L+LS N I + P   ++  + ++ L L NN ++ +P    
Sbjct: 526 RNHLSTLPKGLQHMSDLVTELVLSHNVINNVP-PFISQFTRITFLNLSNNLIKDLP---- 580

Query: 287 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
                                P F  L  L+EL +   +    P  +  LQ L IL  S 
Sbjct: 581 ---------------------PEFGLLNTLRELNIANNRFEALPNALYELQGLEILIASD 619

Query: 347 NSLQSIP-EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
           N +++I   G +NL  L+ LDL +NNI  +PP LG L  ++  L L GNP R  R  IL 
Sbjct: 620 NQIKAINVAGLQNLPRLSTLDLRNNNIEYVPPTLGNLT-NITHLELVGNPFRQPRHQILM 678

Query: 406 RGTKAVLKYLKDKIP 420
           +GT +++ YL+D+IP
Sbjct: 679 KGTDSIMSYLRDRIP 693



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 150/328 (45%), Gaps = 61/328 (18%)

Query: 113 QLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 172
           Q+ L+ LDLS+N+L+ + P+I  + TL  L L  N L  L   +       L K +R  L
Sbjct: 159 QVPLNNLDLSSNALTHISPKIENLLTLTVLQLHDNALVELPPQI-----GKLEKLVRLNL 213

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
             N+                               L  +P +++   E+  L++S N  +
Sbjct: 214 SHNK-------------------------------LKELPPDLYSLPELRHLNISHNEFE 242

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
           EL P++S+   L+ L    N I   P  I   L  L+ L L NN ++++P D    +  L
Sbjct: 243 ELNPDISNLHMLEFLDAGNNNINSLPGGI-GFLVRLTALLLANNHIKELPPD-IVYMRSL 300

Query: 293 QILDLSYN-IASLPEN--------------------PPFSSLPHLQELYLRRMQLREAPT 331
           Q LDL  N + +LPE+                    P F     L EL+     +   P 
Sbjct: 301 QKLDLMKNDLVALPEDMGLLRKLQFLYVQHNDIKELPNFEGNEMLSELHASNNYIDHVPK 360

Query: 332 DILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
           ++   L  L+ILDL  N +  +P+    L +L  LD+++N+IS LP  L  L   L +L+
Sbjct: 361 ELCENLPHLKILDLRDNKITQLPDEVCLLRNLNRLDITNNSISVLPVTLSTLA-HLISLQ 419

Query: 391 LDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           +DGNP+++IRR IL  GT  +LK L D+
Sbjct: 420 VDGNPIKTIRRDILQCGTARILKTLHDR 447



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 182/412 (44%), Gaps = 50/412 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N LT +S   I +   LT L    N L  +P  IG L +L+RL+L  N++  
Sbjct: 162 LNNLDLSSNALTHISPK-IENLLTLTVLQLHDNALVELPPQIGKLEKLVRLNLSHNKLKE 220

Query: 61  IPSS-----------------------ISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P                         IS    L     GNN +++LP  +G L +L  L
Sbjct: 221 LPPDLYSLPELRHLNISHNEFEELNPDISNLHMLEFLDAGNNNINSLPGGIGFLVRLTAL 280

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            L +N +KE   +   +R L  LDL  N L  LP ++G +  L+ L +  N ++     L
Sbjct: 281 LLANNHIKELPPDIVYMRSLQKLDLMKNDLVALPEDMGLLRKLQFLYVQHNDIK----EL 336

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
            N     +L  L +      ++      ++L      L +    L L    ++ +P E+ 
Sbjct: 337 PNFEGNEMLSELHA-----SNNYIDHVPKELCENLPHLKI----LDLRDNKITQLPDEVC 387

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS--LSCLKLD 274
               + +LD++ NSI  LP  LS+ A L +L +  N IK     IL   ++  L  L  D
Sbjct: 388 LLRNLNRLDITNNSISVLPVTLSTLAHLISLQVDGNPIKTIRRDILQCGTARILKTLH-D 446

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFS-----SLPHLQELYLRRMQLREA 329
               ++    G +D+P       S       +  P +      L H + L +    L + 
Sbjct: 447 RAQAKERADGGAEDLPCSSSAAGSQLSMQQQQQLPANMTDKYKLRHTRTLAVNLEGLTDV 506

Query: 330 PTDILRL---QQLRILDLSQNSLQSIPEGFKNLTSL-TELDLSDNNISALPP 377
           PT +  L   +++ ++D ++N L ++P+G ++++ L TEL LS N I+ +PP
Sbjct: 507 PTHVFELASEEKVHVVDFARNHLSTLPKGLQHMSDLVTELVLSHNVINNVPP 558



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 27/184 (14%)

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
           W    +  LDLS N++  + P++ +  +L  L L  N + + P  I   L  L  L L +
Sbjct: 157 WNQVPLNNLDLSSNALTHISPKIENLLTLTVLQLHDNALVELPPQI-GKLEKLVRLNLSH 215

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
           N L+++P D +                         SLP L+ L +   +  E   DI  
Sbjct: 216 NKLKELPPDLY-------------------------SLPELRHLNISHNEFEELNPDISN 250

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L  L  LD   N++ S+P G   L  LT L L++N+I  LPP++  +  SLQ L L  N 
Sbjct: 251 LHMLEFLDAGNNNINSLPGGIGFLVRLTALLLANNHIKELPPDIVYMR-SLQKLDLMKND 309

Query: 396 LRSI 399
           L ++
Sbjct: 310 LVAL 313


>gi|421118972|ref|ZP_15579299.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348312|gb|EKO99138.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 448

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 124/378 (32%), Positives = 186/378 (49%), Gaps = 43/378 (11%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           LI S+  L  +P+ IG L  L  LDL  N+++ +P  I    +L    + +N L  LP E
Sbjct: 53  LILSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQLIILPKE 112

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 146
           + +L  L  LDL SNQL     E  +L+ L  L LSNN L+  P EIGK+  L+ L L+ 
Sbjct: 113 IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSA 172

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
           N ++T+   +       L K     LP N+                              
Sbjct: 173 NQIKTIPKEI-----EKLQKLQSLYLPNNQ------------------------------ 197

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            L+ +P EI +  ++  L+LS N I+ LP E+     LQ L L +N++   P  I   L 
Sbjct: 198 -LTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEI-EKLQ 255

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
            L  L LDNN L  +P +    +  L++L L+ N + ++P+      L +LQ+LYL   Q
Sbjct: 256 KLESLGLDNNQLTTLPQE-IGQLQNLKVLFLNNNQLTTIPQE--IGHLQNLQDLYLVSNQ 312

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L   P +I +LQ L++LDL  N L  +P+    L +L  L LS+N ++ +P E+G L+ +
Sbjct: 313 LTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQTLYLSNNQLTTIPKEIGQLQ-N 371

Query: 386 LQALRLDGNPLRSIRRTI 403
           LQ L L  N L +I + I
Sbjct: 372 LQELYLSNNQLTTIPKEI 389



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 129/396 (32%), Positives = 190/396 (47%), Gaps = 44/396 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L    I     L  L    N L  +P+ I  L  L  LDL  N++  
Sbjct: 73  LQMLDLSDNQLIILPKE-IRQLKNLQMLDLHSNQLIILPKEIRQLKNLQMLDLRSNQLTI 131

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I    +L E Y+ NN L+  P E+GKL KL  L+L +NQ+K    E  +L +L  L
Sbjct: 132 LPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL 191

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L NN L+ LP EIGK+  L+ L L+ N ++TL         P  ++ L+          
Sbjct: 192 YLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTL---------PQEIEKLQKL-------- 234

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              + L L    L+ +P EI +  ++  L L  N +  LP E+ 
Sbjct: 235 -------------------QWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIG 275

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+ L L+ N++   P  I   L +L  L L +N L  +P +    +  LQ+LDL  
Sbjct: 276 QLQNLKVLFLNNNQLTTIPQEI-GHLQNLQDLYLVSNQLTTIPKE-IGQLQNLQMLDLGN 333

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +  LP+      L +LQ LYL   QL   P +I +LQ L+ L LS N L +IP+    
Sbjct: 334 NQLTILPKE--IGKLQNLQTLYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQ 391

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           L +L EL LS+N +  +P E+G L+ +LQ L L  N
Sbjct: 392 LQNLQELYLSNNQLITIPKEIGQLQ-NLQTLYLRNN 426



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 117/355 (32%), Positives = 162/355 (45%), Gaps = 42/355 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT+L    I     L EL  S N L   P+ IG L +L  L+L  N+I +
Sbjct: 119 LQMLDLRSNQLTILPKE-IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKT 177

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  I     L   Y+ NN L+ LP E+GKL KL  L+L  NQ+K    E  +L +L  L
Sbjct: 178 IPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWL 237

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N L+ LP EI K+  L  L L  N L TL   +        L+ L+     N  ++
Sbjct: 238 YLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEI------GQLQNLKVLFLNN--NQ 289

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            +T  +++  +        ++L L    L+ IP EI +   +  LDL  N +  LP E+ 
Sbjct: 290 LTTIPQEIGHLQNL-----QDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIG 344

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +LQTL LS N++   P  I   L +L  L L NN L  +P +               
Sbjct: 345 KLQNLQTLYLSNNQLTTIPKEI-GQLQNLQELYLSNNQLTTIPKE--------------- 388

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
                        L +LQELYL   QL   P +I +LQ L+ L L  N   SI E
Sbjct: 389 ----------IGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQF-SIEE 432



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 147/297 (49%), Gaps = 21/297 (7%)

Query: 110 EACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 167
           EA Q  L + VL LS   L  LP +IG++  L+ L L+ N L  L         P  ++ 
Sbjct: 42  EAFQNPLDVRVLILSEQKLKALPKKIGQLKNLQMLDLSDNQLIIL---------PKEIRQ 92

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
           L++     +  +  + +  ++    R     + L L    L+ +P EI +   + +L LS
Sbjct: 93  LKNL----QMLDLHSNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLS 148

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            N +   P E+     LQ L LS N+IK  P  I   L  L  L L NN L  +P +  K
Sbjct: 149 NNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQEIGK 207

Query: 288 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
            +  LQ L+LSYN I +LP+      L  LQ LYL + QL   P +I +LQ+L  L L  
Sbjct: 208 -LQKLQWLNLSYNQIKTLPQ--EIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDN 264

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           N L ++P+    L +L  L L++N ++ +P E+G L+ +LQ L L  N L +I + I
Sbjct: 265 NQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQ-NLQDLYLVSNQLTTIPKEI 320



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 110/230 (47%), Gaps = 29/230 (12%)

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
           + E+ E  T  +  +T A +  +  + L L    L A+P +I +   +  LDLS N +  
Sbjct: 28  QTEEVEPKTYMD--LTEAFQNPLDVRVLILSEQKLKALPKKIGQLKNLQMLDLSDNQLII 85

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQ L L  N++   P  I   L +L  L L +N L  +P +         
Sbjct: 86  LPKEIRQLKNLQMLDLHSNQLIILPKEI-RQLKNLQMLDLRSNQLTILPKE--------- 135

Query: 294 ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
                              L +LQELYL   QL   P +I +LQ+L+ L+LS N +++IP
Sbjct: 136 ----------------IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIP 179

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           +  + L  L  L L +N ++ LP E+G L+  LQ L L  N ++++ + I
Sbjct: 180 KEIEKLQKLQSLYLPNNQLTTLPQEIGKLQ-KLQWLNLSYNQIKTLPQEI 228


>gi|418735840|ref|ZP_13292245.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748568|gb|EKR01467.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 422

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 130/374 (34%), Positives = 199/374 (53%), Gaps = 34/374 (9%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L LH N   ++P  I    +L E Y+ +N L  LP E+GKL K+  L L +NQL     +
Sbjct: 47  LSLHNNE--TLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKD 104

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L+ L  LDL+NN L+ LP EIG++  LR+L LT N L+TL   +        L+ LR
Sbjct: 105 IGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELDLTNNQLKTLPKDI------GQLQNLR 158

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
               +N  ++  T  +D+  +        +EL L+G  L  +P +I +   +T+L+L+ N
Sbjct: 159 ELYLDN--NQLKTLPKDIGQLQNL-----RELYLDGNQLKTLPKDIGKLQNLTELNLTNN 211

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILT----SLSSLSCLKLDNNPLRQVPSD- 284
            +  LP ++ +  +L  L+L  N++   P  I       +S L  L      L  +P+D 
Sbjct: 212 PLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVSYLGAL------LTTLPNDI 265

Query: 285 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
           G+  +  L+ L+LS N I +LP++     L +LQ LYL   QL   P +I +LQ LR LD
Sbjct: 266 GY--LKSLRELNLSGNQITTLPKD--IGQLQNLQVLYLSENQLATLPKEIGQLQNLRELD 321

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           LS N + ++P+    L SL EL+LS N ++ LP ++G L+ SL+ L L GN + +I + I
Sbjct: 322 LSGNQITTLPKDIGELQSLRELNLSGNLLTTLPKDIGKLQ-SLRELNLGGNQITTIPKEI 380

Query: 404 LDRGTKAVLKYLKD 417
                  VL YL D
Sbjct: 381 GHLKNLQVL-YLDD 393



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 168/364 (46%), Gaps = 42/364 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     LTEL  S N L  +P+ IG L ++ RL L  N++ ++P  I     L E  + N
Sbjct: 59  IGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTN 118

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP E+G+L  L  LDL +NQLK    +  QL+ L  L L NN L  LP +IG++ 
Sbjct: 119 NLLTTLPKEIGQLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQ 178

Query: 138 TLRKLLLTGNPLRTL-----------RSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 186
            LR+L L GN L+TL             +L N P   L K + +        E      +
Sbjct: 179 NLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNL---KNLGELLLINNE 235

Query: 187 LITMATRLS-VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 245
           L T+   +  + + ++S  G  L+ +P++I     + +L+LS N I  LP ++    +LQ
Sbjct: 236 LTTLPKEIGKLKNLQVSYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQ 295

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 305
            L LS N++   P  I   L +L  L L  N +  +P D                     
Sbjct: 296 VLYLSENQLATLPKEI-GQLQNLRELDLSGNQITTLPKD--------------------- 333

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
                  L  L+EL L    L   P DI +LQ LR L+L  N + +IP+   +L +L  L
Sbjct: 334 ----IGELQSLRELNLSGNLLTTLPKDIGKLQSLRELNLGGNQITTIPKEIGHLKNLQVL 389

Query: 366 DLSD 369
            L D
Sbjct: 390 YLDD 393



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 166/365 (45%), Gaps = 65/365 (17%)

Query: 91  LSKLGTL---------DLHSNQLKEY--CVEACQ--LRLSVLDLSNNSLSGLPPEIGKMT 137
           L K+GTL          L + ++  Y    EA Q    + +L L NN    LP EIG++ 
Sbjct: 6   LQKIGTLILILLCFLSQLKAQEIGTYHNLTEALQNPTDVRILSLHNNE--TLPKEIGELQ 63

Query: 138 TLRKLLLTGNPLRTL-----------RSSLVNGPTPAL------LKYLRSRLPENEDSEA 180
            L +L L+ N L+TL           R SL N     L      LK LR         E 
Sbjct: 64  NLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLR---------EL 114

Query: 181 STTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
             T   L T+   +      +EL L    L  +P +I +   + +L L  N ++ LP ++
Sbjct: 115 DLTNNLLTTLPKEIGQLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDI 174

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF------------ 286
               +L+ L L  N++K  P  I   L +L+ L L NNPL  +P D              
Sbjct: 175 GQLQNLRELYLDGNQLKTLPKDI-GKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLIN 233

Query: 287 -------KDIPMLQILDLSYNIASLPENP-PFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
                  K+I  L+ L +SY  A L   P     L  L+EL L   Q+   P DI +LQ 
Sbjct: 234 NELTTLPKEIGKLKNLQVSYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQN 293

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L++L LS+N L ++P+    L +L ELDLS N I+ LP ++G L+ SL+ L L GN L +
Sbjct: 294 LQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQ-SLRELNLSGNLLTT 352

Query: 399 IRRTI 403
           + + I
Sbjct: 353 LPKDI 357



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 135/277 (48%), Gaps = 15/277 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+L  L  + I     L EL    N L  +P+ IG L  L  L L  N++ +
Sbjct: 134 LRELDLTNNQLKTLPKD-IGQLQNLRELYLDNNQLKTLPKDIGQLQNLRELYLDGNQLKT 192

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P  I    +L E  + NN L+ LP ++G L  LG L L +N+L     E  +L+   + 
Sbjct: 193 LPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVS 252

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
                L+ LP +IG + +LR+L L+GN + TL   +       +L YL      +E+  A
Sbjct: 253 YLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVL-YL------SENQLA 305

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
           +  KE  I     L    +EL L G  ++ +P +I E   + +L+LS N +  LP ++  
Sbjct: 306 TLPKE--IGQLQNL----RELDLSGNQITTLPKDIGELQSLRELNLSGNLLTTLPKDIGK 359

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
             SL+ L L  N+I   P  I   L +L  L LD+ P
Sbjct: 360 LQSLRELNLGGNQITTIPKEI-GHLKNLQVLYLDDIP 395


>gi|24216020|ref|NP_713501.1| hypothetical protein LA_3321 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075101|ref|YP_005989420.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|24197248|gb|AAN50519.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458892|gb|AER03437.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
          Length = 452

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 126/371 (33%), Positives = 182/371 (49%), Gaps = 43/371 (11%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P+ IG L  L RLDL  N + ++P  I    +L E  +  N+L+ LP E+G+L  L
Sbjct: 60  LTTLPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENL 119

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDLH N+L    +E  QL+ L  LDL++N L+ LP EI ++  L++L L  N L TL 
Sbjct: 120 QRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLNSNKLTTL- 178

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
                   P  +  L++                            K L+L    L+ +P 
Sbjct: 179 --------PKEIGQLQN---------------------------LKTLNLIVTQLTTLPK 203

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           EI E   +  L+L  N +  LP E+    +L+ L+L  N+I   P  I   L +L  L L
Sbjct: 204 EIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEI-GQLQNLQWLDL 262

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
             N L  +P +    +  LQ LDL  N + +LP+      L +LQEL L   QL   P +
Sbjct: 263 HQNQLTTLPKE-IGQLQNLQRLDLHQNQLTTLPK--EIGQLQNLQELCLDENQLTTLPKE 319

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
           I +LQ LR+LDL  N L ++P+    L SL  L L  N +S LP E+G L+ +LQ L L 
Sbjct: 320 IEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQ-NLQVLGLI 378

Query: 393 GNPLRSIRRTI 403
            N L ++ + I
Sbjct: 379 SNQLTTLPKEI 389



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 128/385 (33%), Positives = 187/385 (48%), Gaps = 38/385 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N LT L    I     L EL  S N L  +P+ +G L  L RLDLHQNR+ +
Sbjct: 73  LQRLDLSFNSLTTLPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLAT 131

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  + +N L+ LP E+ +L  L  LDL+SN+L     E  QL+ L  L
Sbjct: 132 LPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLNSNKLTTLPKEIGQLQNLKTL 191

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L    L+ LP EIG++  L+ L L  N L TL   +  G    L               
Sbjct: 192 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI--GELQNL--------------- 234

Query: 180 ASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
                E L+    R++   KE         L L    L+ +P EI +   + +LDL +N 
Sbjct: 235 -----EILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQ 289

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           +  LP E+    +LQ L L  N++   P  I   L +L  L LDNN L  +P +  + + 
Sbjct: 290 LTTLPKEIGQLQNLQELCLDENQLTTLPKEI-EQLQNLRVLDLDNNQLTTLPKEVLR-LQ 347

Query: 291 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
            LQ+L L  N +++LP+      L +LQ L L   QL   P +I +LQ L+ L L +N L
Sbjct: 348 SLQVLALGSNRLSTLPK--EIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQL 405

Query: 350 QSIPEGFKNLTSLTELDLSDNNISA 374
            + P+  + L +L EL L  N +S+
Sbjct: 406 TTFPKEIRQLKNLQELHLYLNPLSS 430



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 120/229 (52%), Gaps = 8/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+SE+ T  +   T+   L V  + L L    L+ +P EI +   + +LDLS NS+  LP
Sbjct: 30  EESESGTYTDLAKTLQNPLKV--RTLDLRYQKLTTLPKEIGQLQNLQRLDLSFNSLTTLP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L LS N +   P  +   L +L  L L  N L  +P +    +  LQ L
Sbjct: 88  KEIGQLRNLQELDLSFNSLTTLPKEV-GQLENLQRLDLHQNRLATLPME-IGQLKNLQEL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           DL+ N + +LP+      L +LQEL L   +L   P +I +LQ L+ L+L    L ++P+
Sbjct: 146 DLNSNKLTTLPK--EIRQLRNLQELDLNSNKLTTLPKEIGQLQNLKTLNLIVTQLTTLPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L  L+L DN ++ LP E+G L+ +L+ L L  N + ++ + I
Sbjct: 204 EIGELQNLKTLNLLDNQLTTLPKEIGELQ-NLEILVLRENRITALPKEI 251


>gi|410451688|ref|ZP_11305690.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014454|gb|EKO76584.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 511

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 135/386 (34%), Positives = 185/386 (47%), Gaps = 20/386 (5%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           KN L  +P  IG L  L RL L  N+++++P  I     L E  + NN L  LP E+G L
Sbjct: 116 KNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLANNQLRILPKEIGTL 175

Query: 92  SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
             L  L++ +NQL     E   L+ L  L+L NN L  LP EIG +  L  L LT N L 
Sbjct: 176 QHLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLA 235

Query: 151 TLRSSLVNGPTPALLKYLRSRLPE--NEDSEASTTKEDLITMATRLSVTSKE-------- 200
           TL   +        L    ++L     E  +    KE LI    RL    KE        
Sbjct: 236 TLPKEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKE-LILENNRLESFPKEIGTLPNLQ 294

Query: 201 -LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
            L LE    + +P EI     +  L+L  N +  LP E+     L+ L L  N++   P 
Sbjct: 295 RLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPK 354

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 318
            I T L  L  L L NN L  +P +    +  L+ LDL YN +A+LPE     +L  L+ 
Sbjct: 355 EIGT-LQKLQHLYLANNQLATLPKE-IGQLQNLKDLDLEYNQLATLPE--AIGTLQRLEW 410

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L L+  QL   P +I  LQ++  L+L+ N L+++P+G   L SL +LDLS N  +  P E
Sbjct: 411 LSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRTLPQGIGQLQSLKDLDLSGNPFTTFPKE 470

Query: 379 LGLLEPSLQALRLDGNP-LRSIRRTI 403
           +  L+  LQ L+L   P L S R TI
Sbjct: 471 IVGLK-HLQMLKLKNIPALLSERETI 495



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 126/387 (32%), Positives = 186/387 (48%), Gaps = 27/387 (6%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L   P  IG+L  L  L L  N++ ++P  I     L   Y+  N L  LP E+G L 
Sbjct: 48  NQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTLPKEIGTLQ 107

Query: 93  KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
            L  LDL+ NQL+    E  +LR L  L L +N L  LP EIG +  L +L L  N LR 
Sbjct: 108 NLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLANNQLRI 167

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLS 209
           L   +        L++L+         + +     LIT+   +      + L+LE   L 
Sbjct: 168 LPKEI------GTLQHLQ---------DLNVFNNQLITLPQEIGTLQNLQSLNLENNRLV 212

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P EI    ++  L L+ N +  LP E+     L+ L L+ N++K  P  I   L +L 
Sbjct: 213 TLPKEIGALQKLEWLYLTNNQLATLPKEIGKLQKLEWLGLTNNQLKSLPQEI-GKLQNLK 271

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
            L L+NN L   P +    +P LQ L L YN   +LP+     +L  L  L L   QL  
Sbjct: 272 ELILENNRLESFPKE-IGTLPNLQRLHLEYNRFTTLPQE--IGTLHRLPWLNLEHNQLTT 328

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
            P +I RL++L  L+L  N L ++P+    L  L  L L++N ++ LP E+G L+ +L+ 
Sbjct: 329 LPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPKEIGQLQ-NLKD 387

Query: 389 LRLDGNPLRSIRRTILDRGTKAVLKYL 415
           L L+ N L ++   I   GT   L++L
Sbjct: 388 LDLEYNQLATLPEAI---GTLQRLEWL 411



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 133/407 (32%), Positives = 199/407 (48%), Gaps = 25/407 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  N+L  L    I +   L  L  S+N L  +P+ IG+L  L  LDL++N++ +
Sbjct: 63  LKYLSLANNQLKTLPKE-IETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRT 121

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +PS I    SL   ++ +N L  LP E+G L  L  L+L +NQL+    E   L+ L  L
Sbjct: 122 LPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLANNQLRILPKEIGTLQHLQDL 181

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           ++ NN L  LP EIG +  L+ L L  N L TL   +      AL K     L  N+   
Sbjct: 182 NVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEI-----GALQKLEWLYLTNNQ--- 233

Query: 180 ASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                  L T+   +    K   L L    L ++P EI +   + +L L  N ++  P E
Sbjct: 234 -------LATLPKEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKE 286

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           + +  +LQ L L  N+    P  I T L  L  L L++N L  +P +    +  L+ L+L
Sbjct: 287 IGTLPNLQRLHLEYNRFTTLPQEIGT-LHRLPWLNLEHNQLTTLPQE-IGRLERLEWLNL 344

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
             N +A+LP+     +L  LQ LYL   QL   P +I +LQ L+ LDL  N L ++PE  
Sbjct: 345 YNNRLATLPKE--IGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLEYNQLATLPEAI 402

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             L  L  L L +N ++ LP E+G L+  +  L L  N LR++ + I
Sbjct: 403 GTLQRLEWLSLKNNQLTTLPEEIGTLQ-KIVKLNLANNQLRTLPQGI 448


>gi|58332470|ref|NP_001011310.1| leucine-rich repeat-containing protein 40 [Xenopus (Silurana)
           tropicalis]
 gi|82232111|sp|Q5M8G4.1|LRC40_XENTR RecName: Full=Leucine-rich repeat-containing protein 40
 gi|56789102|gb|AAH88034.1| hypothetical LOC496765 [Xenopus (Silurana) tropicalis]
          Length = 605

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 150/503 (29%), Positives = 221/503 (43%), Gaps = 111/503 (22%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL++  NK+  L   L      L  L+   N L  +P++IG LS L  LD+  N + S
Sbjct: 130 LQKLNISHNKIKQLPKEL-QHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRS 188

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN------------------ 102
           I SS+     L +F + +N L+ALP E+GK+  L  LD  SN                  
Sbjct: 189 ISSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQL 248

Query: 103 -----------------QLKEYCVEACQLR------------LSVLDLSNNSLSGLPPEI 133
                            +LKE  V   Q++            LSVL+L  N L  LP EI
Sbjct: 249 YLRQNKLTYLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEI 308

Query: 134 -----------------------GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 170
                                  G +  L+ L L GNPLR +R  ++N  T  LLKYL+ 
Sbjct: 309 SLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLKYLKG 368

Query: 171 RL-------PENEDSEAST-TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA---G 219
           R+        E+E+S A+  T      + T   VT K L       S IP  ++ A    
Sbjct: 369 RVQVPDVKTQEDENSTATAMTLPSESVVNTHAIVTLKTLEYCEKQASLIPEAVFNATGSS 428

Query: 220 EITKLDLSRNSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
            IT ++ S+N + E+P  +     S+  + L  NKI       L  L  L+ + + NN L
Sbjct: 429 FITTVNFSKNQLTEVPARIVEMKDSVCDVNLGFNKISSI-SLNLCMLLKLTHIDMRNNVL 487

Query: 279 RQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
             +PS+  + +  LQ + LS+N                        + +  P  + R+  
Sbjct: 488 TSLPSE-MEAMTRLQSVILSFN------------------------RFKHFPDVLYRIPT 522

Query: 339 LRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
           L  + +S N + SI P     +T L+ LDL +N++  +PP LG  E SL+AL L+GNP R
Sbjct: 523 LETILISSNQIGSIDPTQLIKMTKLSTLDLQNNDLLQIPPALGNCE-SLRALHLEGNPFR 581

Query: 398 SIRRTILDRGTKAVLKYLKDKIP 420
           + R  IL +GT AVL+YL+ +IP
Sbjct: 582 NPRAAILAKGTVAVLEYLRSRIP 604



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 134/295 (45%), Gaps = 94/295 (31%)

Query: 216 WEAGEIT----------------------------------------------KLDLSRN 229
           WE  ++T                                              KL++S N
Sbjct: 79  WEQTDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHN 138

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            I++LP EL    +L++L+L  N++++ PD+I   LS L  L + NN LR + S     +
Sbjct: 139 KIKQLPKELQHLQNLKSLLLQHNQLEELPDSI-GHLSILEELDVSNNCLRSI-SSSVGQL 196

Query: 290 PMLQILDLSYN-IASLP-------------------ENPPFS--SLPHLQELYLRR---- 323
             L   +LS N + +LP                   EN P S   +  L++LYLR+    
Sbjct: 197 TGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLT 256

Query: 324 --------MQLRE-----------APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
                    +L+E            P  +  L  L +L+L  N L+ +PE    L  L  
Sbjct: 257 YLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLER 316

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           LDLS+N++ +LP  LG L P+L++L+L+GNPLR IRR IL++GT+ +LKYLK ++
Sbjct: 317 LDLSNNDLGSLPCTLGSL-PNLKSLQLEGNPLRGIRRDILNKGTQELLKYLKGRV 370



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 181/398 (45%), Gaps = 29/398 (7%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+LI + N L  + E I  L  L+ LD+H N+I+S+P +I    +L +  + +N
Sbjct: 79  WEQTDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHN 138

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
            +  LP EL  L  L +L L  NQL+E       L  L  LD+SNN L  +   +G++T 
Sbjct: 139 KIKQLPKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTG 198

Query: 139 LRKLLLTGNPLRTLRSSLVNGP-------TPALLKYLRSRLPENEDSEASTTKEDLITMA 191
           L K  L+ N L  L + +           T  LL+ + + +   E  E    +++ +T  
Sbjct: 199 LVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYL 258

Query: 192 TRLSVTS--KELSLEGMNLSAI-PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 248
             L   +  KEL +    +  + P  +     ++ L+L  N ++ LP E+S    L+ L 
Sbjct: 259 PELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLD 318

Query: 249 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD----GFKDIPMLQILDLSYNIASL 304
           LS N +   P   L SL +L  L+L+ NPLR +  D    G ++  +L+ L     +  +
Sbjct: 319 LSNNDLGSLP-CTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQE--LLKYLKGRVQVPDV 375

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS--- 361
                 +S      L        E+  +   +  L+ L+  +     IPE   N T    
Sbjct: 376 KTQEDENSTATAMTLP------SESVVNTHAIVTLKTLEYCEKQASLIPEAVFNATGSSF 429

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           +T ++ S N ++ +P  +  ++ S+  + L  N + SI
Sbjct: 430 ITTVNFSKNQLTEVPARIVEMKDSVCDVNLGFNKISSI 467


>gi|418728092|ref|ZP_13286672.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777137|gb|EKR57105.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 423

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 125/369 (33%), Positives = 183/369 (49%), Gaps = 20/369 (5%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           LI S+  L  +P+ I  L  L  LDL  N++ ++P  I    +L    +  N L+ALP E
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 146
           +G+L  L  L L++NQL     E  QL+ L +LDL NN L+ LP EIG++  L++L L+ 
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSY 170

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
           N L TL   +       LL    S+L         T     I     L     EL L   
Sbjct: 171 NQLTTLPKEIGKLENLQLLSLYESQL---------TILPQEIGKLQNLH----ELDLSHN 217

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            L+ +P EI +   + +  L  N +  LP E+    +L  L L  N++   P  I   L 
Sbjct: 218 QLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEI-GQLQ 276

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
           +L    LDNN    +P +    +  LQ L LSYN + + P+      L  LQ L L   Q
Sbjct: 277 NLQRFVLDNNQFTILPKE-IGQLQNLQELYLSYNQLTTFPK--EIGKLQKLQTLNLWNNQ 333

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L   P +I +L+ L+ L+LS+N L++IP+    L +L  LDL +N ++ LP E+G L+ +
Sbjct: 334 LTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLRNNQLTILPKEIGQLK-N 392

Query: 386 LQALRLDGN 394
           LQ L L+ N
Sbjct: 393 LQELYLNNN 401



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 156/366 (42%), Gaps = 64/366 (17%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N+LT L    I     L  L  + N L  +P  I  L  L  LDL  N++  +P  I   
Sbjct: 102 NQLTALPKE-IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQL 160

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 127
            +L E Y+  N L+ LP E+GKL  L  L L+ +QL     E  +L+ L  LDLS+N L+
Sbjct: 161 QNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLT 220

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            LP EIG++  L++ +L  N L  L   +  G    L                       
Sbjct: 221 ILPKEIGQLQNLQRFVLDNNQLTILPKEI--GKLQNL----------------------- 255

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
                       EL L    L+ +P EI +   + +  L  N    LP E+    +LQ L
Sbjct: 256 -----------HELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQEL 304

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 307
            LS N++  +P  I   L  L  L L NN L  +P +  + +  L+ L+LS N       
Sbjct: 305 YLSYNQLTTFPKEI-GKLQKLQTLNLWNNQLTTLPEE-IEQLKNLKTLNLSEN------- 355

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                            QL+  P +I +LQ L+ LDL  N L  +P+    L +L EL L
Sbjct: 356 -----------------QLKTIPQEIGQLQNLKSLDLRNNQLTILPKEIGQLKNLQELYL 398

Query: 368 SDNNIS 373
           ++N  S
Sbjct: 399 NNNQFS 404



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/228 (35%), Positives = 122/228 (53%), Gaps = 7/228 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E   T +DL T A +  +  + L L    L+ +P EI +   +  LDL  N +  LP 
Sbjct: 28  QAEEPGTYQDL-TKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPK 86

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    +LQ LIL  N++   P  I   L +L  L L+NN L  +P++  + +  LQ+LD
Sbjct: 87  EIGQLKNLQLLILYYNQLTALPKEI-GQLKNLKVLFLNNNQLTTLPTE-IRQLKNLQMLD 144

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N +  LP+      L +LQELYL   QL   P +I +L+ L++L L ++ L  +P+ 
Sbjct: 145 LGNNQLTILPK--EIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQE 202

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L +L ELDLS N ++ LP E+G L+ +LQ   LD N L  + + I
Sbjct: 203 IGKLQNLHELDLSHNQLTILPKEIGQLQ-NLQRFVLDNNQLTILPKEI 249



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 138/307 (44%), Gaps = 40/307 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT+L    I     L EL  S N L  +P+ IG L  L  L L+++++  
Sbjct: 140 LQMLDLGNNQLTILPKE-IGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTI 198

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  + +N L+ LP E+G+L  L    L +NQL     E  +L+ L  L
Sbjct: 199 LPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHEL 258

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +N L+ LP EIG++  L++ +L  N    L   +  G    L               
Sbjct: 259 YLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEI--GQLQNL--------------- 301

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              +EL L    L+  P EI +  ++  L+L  N +  LP E+ 
Sbjct: 302 -------------------QELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIE 342

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+TL LS N++K  P  I   L +L  L L NN L  +P +    +  LQ L L+ 
Sbjct: 343 QLKNLKTLNLSENQLKTIPQEI-GQLQNLKSLDLRNNQLTILPKE-IGQLKNLQELYLNN 400

Query: 300 NIASLPE 306
           N  S+ E
Sbjct: 401 NQFSIEE 407



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 7/144 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +  ++ N+ T+L    I     L EL  S N L   P+ IG L +L  L+L  N++ +
Sbjct: 278 LQRFVLDNNQFTILPKE-IGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTT 336

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    +  N L  +P E+G+L  L +LDL +NQL     E  QL+ L  L
Sbjct: 337 LPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLRNNQLTILPKEIGQLKNLQEL 396

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL 143
            L+NN  S     I +   +RKLL
Sbjct: 397 YLNNNQFS-----IEEKERIRKLL 415


>gi|359728044|ref|ZP_09266740.1| hypothetical protein Lwei2_14432 [Leptospira weilii str.
           2006001855]
          Length = 456

 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 182/370 (49%), Gaps = 43/370 (11%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           L  + N L  +P+ IG L +L  L  + N++ +IP  I    +L +  + +N L  +P E
Sbjct: 103 LYLNSNQLITLPKEIGKLKKLRELHSYNNQLKAIPKEIGKLQNLQKLDLNHNQLKTIPKE 162

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 146
           +GKL  L  L L  NQLK    E  +L+ L VL LSNN L  LP E G + +L+ L L+ 
Sbjct: 163 IGKLQNLQELGLIGNQLKTIPKEFGKLKSLQVLYLSNNQLKTLPKEFGDLKSLQVLYLSN 222

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
           N L+TL         P  ++ L+                             +EL+L   
Sbjct: 223 NQLKTL---------PKEIRKLKK---------------------------LQELALYNN 246

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            L  +P EI +   +  L LS N +++LP E     SLQ L LS  ++  +P+ I   L 
Sbjct: 247 QLKTLPKEIGKLQNLQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLTTFPNEI-GELQ 305

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
           +L+ L L NN L   P++   ++  L  L LS N + +LP+      L +LQ L L   Q
Sbjct: 306 NLTELYLSNNQLTTFPNE-IGELQNLTELYLSNNQLQALPK--KIEKLKNLQVLILNNNQ 362

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L   P +I  L+ L++L L+ N L +IP     L +L EL+LS N + ALP E+G L+ +
Sbjct: 363 LTTIPNEIGELKNLQVLTLNNNQLTTIPNEIGELKNLRELNLSRNQLQALPKEIGHLK-N 421

Query: 386 LQALRLDGNP 395
           LQ L LD  P
Sbjct: 422 LQELYLDDIP 431



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 111/315 (35%), Positives = 156/315 (49%), Gaps = 16/315 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L EL +  N L  +P+ IG L  L +LDL+ N++ +IP  I    +L E  +  
Sbjct: 117 IGKLKKLRELHSYNNQLKAIPKEIGKLQNLQKLDLNHNQLKTIPKEIGKLQNLQELGLIG 176

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L  +P E GKL  L  L L +NQLK    E   L+ L VL LSNN L  LP EI K+ 
Sbjct: 177 NQLKTIPKEFGKLKSLQVLYLSNNQLKTLPKEFGDLKSLQVLYLSNNQLKTLPKEIRKLK 236

Query: 138 TLRKLLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPENEDSEASTTK-----EDLIT 189
            L++L L  N L+TL      L N     L      +LP+      S  K       L T
Sbjct: 237 KLQELALYNNQLKTLPKEIGKLQNLQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLTT 296

Query: 190 MATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
               +       EL L    L+  P+EI E   +T+L LS N +Q LP ++    +LQ L
Sbjct: 297 FPNEIGELQNLTELYLSNNQLTTFPNEIGELQNLTELYLSNNQLQALPKKIEKLKNLQVL 356

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
           IL+ N++   P+ I   L +L  L L+NN L  +P++   ++  L+ L+LS N + +LP+
Sbjct: 357 ILNNNQLTTIPNEI-GELKNLQVLTLNNNQLTTIPNE-IGELKNLRELNLSRNQLQALPK 414

Query: 307 NPPFSSLPHLQELYL 321
                 L +LQELYL
Sbjct: 415 --EIGHLKNLQELYL 427



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 113/327 (34%), Positives = 149/327 (45%), Gaps = 64/327 (19%)

Query: 74  FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI 133
            Y+ +N L  LP E+GKL KL   +LHS                     NN L  +P EI
Sbjct: 103 LYLNSNQLITLPKEIGKLKKLR--ELHS--------------------YNNQLKAIPKEI 140

Query: 134 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 193
           GK+  L+KL L  N L+T+   +  G    L                             
Sbjct: 141 GKLQNLQKLDLNHNQLKTIPKEI--GKLQNL----------------------------- 169

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
                +EL L G  L  IP E  +   +  L LS N ++ LP E     SLQ L LS N+
Sbjct: 170 -----QELGLIGNQLKTIPKEFGKLKSLQVLYLSNNQLKTLPKEFGDLKSLQVLYLSNNQ 224

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 312
           +K  P  I   L  L  L L NN L+ +P +  K +  LQ+L LSYN +  LP+   F  
Sbjct: 225 LKTLPKEI-RKLKKLQELALYNNQLKTLPKEIGK-LQNLQVLGLSYNQLKKLPK--EFGK 280

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ+LYL   QL   P +I  LQ L  L LS N L + P     L +LTEL LS+N +
Sbjct: 281 LKSLQKLYLSNYQLTTFPNEIGELQNLTELYLSNNQLTTFPNEIGELQNLTELYLSNNQL 340

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP ++  L+ +LQ L L+ N L +I
Sbjct: 341 QALPKKIEKLK-NLQVLILNNNQLTTI 366


>gi|67473011|ref|XP_652293.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
 gi|56469121|gb|EAL46907.1| leucine-rich repeat containing protein [Entamoeba histolytica
           HM-1:IMSS]
 gi|449706384|gb|EMD46243.1| oligodendrocytemyelin glycoprotein precursor, putative [Entamoeba
           histolytica KU27]
          Length = 508

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 213/442 (48%), Gaps = 36/442 (8%)

Query: 1   MSKLDV---EGNKLTVLSNNLIASWTMLTELIASKN--LLNGMPETIGSLSRLIRLDLHQ 55
           M KL+V     N++T + ++ I   + L EL   +N    +G+   I   S L RLD+  
Sbjct: 60  MPKLEVLTLSNNRITSIPDS-IQKASNLRELYLGQNNLFYDGISSEIKMCSNLQRLDISM 118

Query: 56  NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 115
           N++ SIP  I    SL    +  N L +LP E+G L KL TL ++ N +++   E   LR
Sbjct: 119 NKLESIPPEIGSLLSLQYLNISENNLKSLPPEIGMLDKLQTLLVNKNSIRKLPTEIGNLR 178

Query: 116 -LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
            L  LDLSNN +  LP E+  M  L+ L +  N L      L N       K+L     +
Sbjct: 179 SLYELDLSNNQMDLLPEELSNMIALKILRIGFNKLSGNIDVLTN------FKFLVELDCQ 232

Query: 175 NEDSEASTTKEDLITMATRLSVTS---------------KELSL-EGMNLSAIPSEIWEA 218
           N          D +   TRL V +                EL++ + + +  +P EI+  
Sbjct: 233 NNQGILELPPLDSLQNLTRLVVKNLPITNIPGLSSLKMLCELNVRDNIKMKGMPEEIFNI 292

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD--WPDAILTSLSSLSCLKLDNN 276
             + +LD    +I  LPP ++S  +L  L L+ N + +  +P+ I ++L+++S L + NN
Sbjct: 293 VSLQRLDFVGCNITVLPPNITSLTNLNILELAHNSLNESSFPEGI-STLTNISKLSISNN 351

Query: 277 PLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            +   P     D+  +  LD+S N+   LPE   FS+L ++Q L +   +L   P  + R
Sbjct: 352 QIHSYPQ-CLCDLTSIVDLDVSNNLMVELPET--FSNLTNVQNLTVAGNRLNRLPESLGR 408

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L  +  LD   N L+S+P    +L  L  L+L+ N I  LP E+G L+  LQ + L  NP
Sbjct: 409 LISVTYLDARNNQLKSLPASIGDLRQLNRLELTQNMIPVLPVEMGQLDGILQTIELTNNP 468

Query: 396 LRSIRRTILDRGTKAVLKYLKD 417
           L    + ++ +G   + KYLKD
Sbjct: 469 LVVPPKEVVIKGAHEICKYLKD 490



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 128/409 (31%), Positives = 192/409 (46%), Gaps = 42/409 (10%)

Query: 2   SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 61
           S +++ G  L+     +  S  + T   AS+N    +PE +  + +L  L L  NRI SI
Sbjct: 19  SSIEISGKNLSEFPKQI--SKCVCTNFNASQNDFTSIPEDVCLMPKLEVLTLSNNRITSI 76

Query: 62  PSSISGCCSLAEFYMGNNAL--SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSV 118
           P SI    +L E Y+G N L    + +E+   S L  LD+  N+L+    E    L L  
Sbjct: 77  PDSIQKASNLRELYLGQNNLFYDGISSEIKMCSNLQRLDISMNKLESIPPEIGSLLSLQY 136

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           L++S N+L  LPPEIG +  L+ LL+  N +R L         P  +  LRS      + 
Sbjct: 137 LNISENNLKSLPPEIGMLDKLQTLLVNKNSIRKL---------PTEIGNLRSLY----EL 183

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPE 237
           + S  + DL+       +  K L +    LS     +     + +LD   N  I ELPP 
Sbjct: 184 DLSNNQMDLLPEELSNMIALKILRIGFNKLSGNIDVLTNFKFLVELDCQNNQGILELPP- 242

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL-------DNNPLRQVPSDGFKDIP 290
                SLQ   L+R  +K+ P   +T++  LS LK+       DN  ++ +P + F +I 
Sbjct: 243 ---LDSLQN--LTRLVVKNLP---ITNIPGLSSLKMLCELNVRDNIKMKGMPEEIF-NIV 293

Query: 291 MLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREA--PTDILRLQQLRILDLSQN 347
            LQ LD    NI  LP  P  +SL +L  L L    L E+  P  I  L  +  L +S N
Sbjct: 294 SLQRLDFVGCNITVLP--PNITSLTNLNILELAHNSLNESSFPEGISTLTNISKLSISNN 351

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            + S P+   +LTS+ +LD+S+N +  LP     L  ++Q L + GN L
Sbjct: 352 QIHSYPQCLCDLTSIVDLDVSNNLMVELPETFSNLT-NVQNLTVAGNRL 399


>gi|291236280|ref|XP_002738068.1| PREDICTED: leucine rich repeat containing 40-like [Saccoglossus
           kowalevskii]
          Length = 1970

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 208/454 (45%), Gaps = 85/454 (18%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N++  +P  IG L  L  +D+ +N++  IP S+ G   LA+F +  N +S +P E+G L+
Sbjct: 134 NMVTEIPAEIGKLKHLEEIDISKNQVTQIPKSVDGLVHLAKFDISQNHVSVIPGEIGCLT 193

Query: 93  KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
           +L   ++ +NQ+K+      +L+ L   D+++N L+ LP +I  M  L++L LTGN L+ 
Sbjct: 194 QLQIFNISNNQVKDIPPTIGRLQMLHRFDIAHNRLTSLPRDIKSMIELKELSLTGNNLKD 253

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
           +   +       + +Y      E E+ E          +   + V S+++ L   +L+ +
Sbjct: 254 IPRHIYEKGIVEIRQYW-----ETEEVE----------LMKDIDVLSEDIKLGSRSLTYL 298

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           PS I +   +  L++S NS+  LP EL+    L+ L LS N  +  P  +   + ++  L
Sbjct: 299 PSMIGQYTNVKALNISNNSLMSLPMELAKLQQLEELNLSDNHFQQIPVHV-CKIQNIQKL 357

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPF-------------------S 311
            + NN L Q P+    DI  L+ LDLS N I+ +P++  +                   S
Sbjct: 358 NMRNNMLTQFPN----DIDNLKQLDLSGNSISVIPDSCQYPLAKLDISDNKLTKVPKSIS 413

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT-------- 363
            L  L+E  L    +      I  L QL ILD+  N L+ +P  F NLTSL         
Sbjct: 414 QLHELEEFNLSNNAIYHVSPFIGELNQLLILDIHNNKLEELPLDFWNLTSLNKLDLHENK 473

Query: 364 ---------------ELDLSDNNISALP-----PELGLLE----------------PSLQ 387
                          ELDLS NN+S +P     P++  L+                 SLQ
Sbjct: 474 LNEISERISQLQNLRELDLSRNNLSVVPSGCFLPQIHSLDISDNAVIDIPSDIGQMTSLQ 533

Query: 388 ALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
            L L GN +  I  T+ D    + L   K+KIP+
Sbjct: 534 NLNLSGNRITEIPSTVCDLYQLSHLNLKKNKIPK 567



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 204/422 (48%), Gaps = 31/422 (7%)

Query: 1    MSKLD------VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 54
            M KLD         N +T +SNN     + L  L  S N +  +P+T G L  L  LDL 
Sbjct: 893  MHKLDGLQLLQASQNCITEISNN-TCILSELEMLDISHNQITEIPDTFGKLKTLNELDLS 951

Query: 55   QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 114
             N+I +IPSSIS    L +F +  N LS LP  +G L  L  LD+  NQ+         L
Sbjct: 952  GNQIRTIPSSISQLQQLTKFAIRRNQLSELPKCIGDLQLLQQLDISGNQITMVPETIGVL 1011

Query: 115  R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            + L+ L+L +N L+ + P IG +  L +L    N L ++   +    T   L+ +  R  
Sbjct: 1012 KELTKLELGDNQLTSMTPNIGLLCKLEELHARNNKLTSIPREIKRITT---LRTISLRGN 1068

Query: 174  ENEDSEASTTK-----------EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 222
            E ED   +  +           E  + +     V+++ + L+G  L+ +P  I     + 
Sbjct: 1069 EIEDPPINECENYFQLLSNYWDEQELRILEPFDVSTRTIRLDGAQLTYVPLLIHRYTNLI 1128

Query: 223  KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
            +LDL  N +  LP E+S    L+ + LS N + D PD I+++L  +S L L NN + + P
Sbjct: 1129 ELDLQNNKLHSLPLEISRLNMLEKINLSNNLLSDVPD-IISTLPKMSTLVLRNNNINEFP 1187

Query: 283  SDGFKDIPMLQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
                  I  L+ LD+S  NI  +P +    +L  L  L +    LRE P  + ++  L  
Sbjct: 1188 C----SIVSLKELDISNNNIQIIPTD--IHTLYQLNRLDVSSNSLRELPDTLYKVTTLVQ 1241

Query: 342  LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
            L+LS N + SI    ++LT+L   D+S N ++ +P E+G L  +L+ L L  N ++ I  
Sbjct: 1242 LNLSDNQIVSISTDIRSLTNLKVFDISKNKLTEIPDEIGNL-VALERLYLSSNTIQIIPS 1300

Query: 402  TI 403
            +I
Sbjct: 1301 SI 1302



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 200/452 (44%), Gaps = 70/452 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++ GN++T + +  +     L+ L   KN +  +P  IG L  L+  D+  N I  
Sbjct: 532 LQNLNLSGNRITEIPST-VCDLYQLSHLNLKKNKIPKLPLNIGRLHNLLSFDVSDNTIDE 590

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IPS++     L +F + NN L  LP  + KL  L  L +H N + E   + C+  L  L 
Sbjct: 591 IPSTVGNLGKLTKFIISNNELDTLPRAMHKLVNLNDLQIHGNPITEPTEDVCKQGLDALH 650

Query: 121 --------------------------LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 154
                                     ++   ++ +PP I + T L+KL  + N + T   
Sbjct: 651 FYWEELDKIDRDLLKDFDRSTTDEITITQRDMTYIPPMIDEYTDLKKLDFSANRIATFPV 710

Query: 155 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 214
            L             S+L + E+ + S      I ++       K L L    L+  P+ 
Sbjct: 711 EL-------------SQLNKLEELDLSDNIFQEIPVSIFQLGKLKILHLSNNKLTIFPTN 757

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           I   G +  LDLS N I E      + ++L  L +S N +   P+  LT LSSL  L + 
Sbjct: 758 I---GNVKNLDLSANKITEFSCPFPNFSNLSRLNVSNNILTQLPED-LTGLSSLEDLDIS 813

Query: 275 NNPLRQVPS---------------DGFKDIPM-------LQILDLSYN-IASLPENPPFS 311
           +N + ++PS               +    +P+       L  LDLS N ++ LP++  F 
Sbjct: 814 DNKIDEIPSTVSELHSLTNLNAHANNLNVVPVELCTLTNLCYLDLSKNHLSCLPDD--FC 871

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           +L  L++LY++  +L   P D+ +L  L++L  SQN +  I      L+ L  LD+S N 
Sbjct: 872 NLRQLRQLYIQENELECLPADMHKLDGLQLLQASQNCITEISNNTCILSELEMLDISHNQ 931

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           I+ +P   G L+ +L  L L GN +R+I  +I
Sbjct: 932 ITEIPDTFGKLK-TLNELDLSGNQIRTIPSSI 962



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 219/487 (44%), Gaps = 94/487 (19%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
            ++K  +  N+L+ L    I    +L +L  S N +  +PETIG L  L +L+L  N++ S
Sbjct: 968  LTKFAIRRNQLSELPK-CIGDLQLLQQLDISGNQITMVPETIGVLKELTKLELGDNQLTS 1026

Query: 61   IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ------- 113
            +  +I   C L E +  NN L+++P E+ +++ L T+ L  N++++  +  C+       
Sbjct: 1027 MTPNIGLLCKLEELHARNNKLTSIPREIKRITTLRTISLRGNEIEDPPINECENYFQLLS 1086

Query: 114  --------------------LRLS------------------VLDLSNNSLSGLPPEIGK 135
                                +RL                    LDL NN L  LP EI +
Sbjct: 1087 NYWDEQELRILEPFDVSTRTIRLDGAQLTYVPLLIHRYTNLIELDLQNNKLHSLPLEISR 1146

Query: 136  MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
            +  L K+ L+ N L  +   +   P  + L    + + E   S                 
Sbjct: 1147 LNMLEKINLSNNLLSDVPDIISTLPKMSTLVLRNNNINEFPCS----------------I 1190

Query: 196  VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP-------------------- 235
            V+ KEL +   N+  IP++I    ++ +LD+S NS++ELP                    
Sbjct: 1191 VSLKELDISNNNIQIIPTDIHTLYQLNRLDVSSNSLRELPDTLYKVTTLVQLNLSDNQIV 1250

Query: 236  ---PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
                ++ S  +L+   +S+NK+ + PD I  +L +L  L L +N ++ +PS     +  L
Sbjct: 1251 SISTDIRSLTNLKVFDISKNKLTEIPDEI-GNLVALERLYLSSNTIQIIPS-SIARLTNL 1308

Query: 293  QILDLSYNIAS-LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
              L++S NI S +P+     +L  LQ L L R Q+++    + ++ +L +LD+S N L  
Sbjct: 1309 SELNISNNIISCIPDG--IYALTKLQRLNLMRNQIKDLSESVGKMVELVVLDISHNDLSI 1366

Query: 352  IPEGFKNLTSLTELDLSDN-NISALPPELGLLE-PSLQALRLDGNPLRSIRRTILDRGTK 409
            IP   KNL  L  LDL  N  +++LP  +G++   +L    L+G  + +    +   G  
Sbjct: 1367 IPLSIKNLQMLEILDLQGNAKLTSLP--IGIIRLTNLNQCGLEGTTMETPPMNVCLAGIC 1424

Query: 410  AVLKYLK 416
            ++ +Y +
Sbjct: 1425 SIREYFE 1431



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 205/506 (40%), Gaps = 106/506 (20%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N L+V+ +        +  L  S N +  +P  IG ++ L  L+L  NRI  
Sbjct: 487 LRELDLSRNNLSVVPSGCFLP--QIHSLDISDNAVIDIPSDIGQMTSLQNLNLSGNRITE 544

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS++     L+   +  N +  LP  +G+L  L + D+  N + E       L +L+  
Sbjct: 545 IPSTVCDLYQLSHLNLKKNKIPKLPLNIGRLHNLLSFDVSDNTIDEIPSTVGNLGKLTKF 604

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR--SRLPEN-- 175
            +SNN L  LP  + K+  L  L + GNP+      +      AL  Y     ++  +  
Sbjct: 605 IISNNELDTLPRAMHKLVNLNDLQIHGNPITEPTEDVCKQGLDALHFYWEELDKIDRDLL 664

Query: 176 EDSEASTTKEDLITMATRLSVTS--------KELSLEGMNLSAIPSEIWEAGEITKLDLS 227
           +D + STT E  IT      +          K+L      ++  P E+ +  ++ +LDLS
Sbjct: 665 KDFDRSTTDEITITQRDMTYIPPMIDEYTDLKKLDFSANRIATFPVELSQLNKLEELDLS 724

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAI-------------------LTSLSSL 268
            N  QE+P  +     L+ L LS NK+  +P  I                     + S+L
Sbjct: 725 DNIFQEIPVSIFQLGKLKILHLSNNKLTIFPTNIGNVKNLDLSANKITEFSCPFPNFSNL 784

Query: 269 SCLKLDNNPLRQVPSD---------------GFKDIPM---------------------- 291
           S L + NN L Q+P D                  +IP                       
Sbjct: 785 SRLNVSNNILTQLPEDLTGLSSLEDLDISDNKIDEIPSTVSELHSLTNLNAHANNLNVVP 844

Query: 292 --------LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ----- 337
                   L  LDLS N ++ LP++  F +L  L++LY++  +L   P D+ +L      
Sbjct: 845 VELCTLTNLCYLDLSKNHLSCLPDD--FCNLRQLRQLYIQENELECLPADMHKLDGLQLL 902

Query: 338 ------------------QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
                             +L +LD+S N +  IP+ F  L +L ELDLS N I  +P  +
Sbjct: 903 QASQNCITEISNNTCILSELEMLDISHNQITEIPDTFGKLKTLNELDLSGNQIRTIPSSI 962

Query: 380 GLLEPSLQALRLDGNPLRSIRRTILD 405
             L+  L    +  N L  + + I D
Sbjct: 963 SQLQ-QLTKFAIRRNQLSELPKCIGD 987



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 195/441 (44%), Gaps = 35/441 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++K D+  N ++V+    I   T L     S N +  +P TIG L  L R D+  NR+ S
Sbjct: 172 LAKFDISQNHVSVIPGE-IGCLTQLQIFNISNNQVKDIPPTIGRLQMLHRFDIAHNRLTS 230

Query: 61  IPSSISGCCSLAEFYMGNNALSALPA--------------ELGKLSKLGTLDLHSNQLKE 106
           +P  I     L E  +  N L  +P               E  ++  +  +D+ S  +K 
Sbjct: 231 LPRDIKSMIELKELSLTGNNLKDIPRHIYEKGIVEIRQYWETEEVELMKDIDVLSEDIKL 290

Query: 107 YCVEACQL--------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---RSS 155
                  L         +  L++SNNSL  LP E+ K+  L +L L+ N  + +      
Sbjct: 291 GSRSLTYLPSMIGQYTNVKALNISNNSLMSLPMELAKLQQLEELNLSDNHFQQIPVHVCK 350

Query: 156 LVNGPTPALLKYLRSRLPENEDS--EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
           + N     +   + ++ P + D+  +   +   +  +         +L +    L+ +P 
Sbjct: 351 IQNIQKLNMRNNMLTQFPNDIDNLKQLDLSGNSISVIPDSCQYPLAKLDISDNKLTKVPK 410

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
            I +  E+ + +LS N+I  + P +     L  L +  NK+++ P     +L+SL+ L L
Sbjct: 411 SISQLHELEEFNLSNNAIYHVSPFIGELNQLLILDIHNNKLEELP-LDFWNLTSLNKLDL 469

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
             N L ++ S+    +  L+ LDLS N  S+   P    LP +  L +    + + P+DI
Sbjct: 470 HENKLNEI-SERISQLQNLRELDLSRNNLSVV--PSGCFLPQIHSLDISDNAVIDIPSDI 526

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
            ++  L+ L+LS N +  IP    +L  L+ L+L  N I  LP  +G L  +L +  +  
Sbjct: 527 GQMTSLQNLNLSGNRITEIPSTVCDLYQLSHLNLKKNKIPKLPLNIGRLH-NLLSFDVSD 585

Query: 394 NPLRSIRRTILDRG--TKAVL 412
           N +  I  T+ + G  TK ++
Sbjct: 586 NTIDEIPSTVGNLGKLTKFII 606



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S+ + L G N++A+P +I     +  +DL  N++ ELP + +   +LQ L LS N  +  
Sbjct: 11  SEVIDLNGCNINALPEDIARYTRVKSIDLHDNALSELPDKFADLKTLQKLNLSFNDFRSM 70

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P  I+  L  L+ L ++ N L ++P++ +    + ++      I  +  +P  S L +L 
Sbjct: 71  PTPII-HLQQLTSLSVNINDLAEIPTELYNITALTELSLFKNKIQEI--SPGISKLKNLI 127

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +  ++   + E P +I +L+ L  +D+S+N +  IP+    L  L + D+S N++S +P 
Sbjct: 128 KFNIKDNMVTEIPAEIGKLKHLEEIDISKNQVTQIPKSVDGLVHLAKFDISQNHVSVIPG 187

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
           E+G L   LQ   +  N ++ I  TI
Sbjct: 188 EIGCL-TQLQIFNISNNQVKDIPPTI 212



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 147/299 (49%), Gaps = 44/299 (14%)

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
           V+DL+  +++ LP +I + T ++ + L  N L                    S LP+   
Sbjct: 13  VIDLNGCNINALPEDIARYTRVKSIDLHDNAL--------------------SELPDK-- 50

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                   DL T+        ++L+L   +  ++P+ I    ++T L ++ N + E+P E
Sbjct: 51  ------FADLKTL--------QKLNLSFNDFRSMPTPIIHLQQLTSLSVNINDLAEIPTE 96

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           L +  +L  L L +NKI++    I + L +L    + +N + ++P++  K +  L+ +D+
Sbjct: 97  LYNITALTELSLFKNKIQEISPGI-SKLKNLIKFNIKDNMVTEIPAEIGK-LKHLEEIDI 154

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
           S N +  +P++     L HL +  + +  +   P +I  L QL+I ++S N ++ IP   
Sbjct: 155 SKNQVTQIPKS--VDGLVHLAKFDISQNHVSVIPGEIGCLTQLQIFNISNNQVKDIPPTI 212

Query: 357 KNLTSLTELDLSDNNISALPPEL-GLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
             L  L   D++ N +++LP ++  ++E  L+ L L GN L+ I R I ++G   + +Y
Sbjct: 213 GRLQMLHRFDIAHNRLTSLPRDIKSMIE--LKELSLTGNNLKDIPRHIYEKGIVEIRQY 269


>gi|418728103|ref|ZP_13286683.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777148|gb|EKR57116.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 447

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 192/396 (48%), Gaps = 44/396 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L    I     L  L  S N L  +P+ I  L  L  LDL  N++  
Sbjct: 72  LQMLDLSDNQLIILPKE-IRQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTI 130

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I    +L E Y+ NN L+  P E+GKL KL  L+L +NQ+K    E  +L +L  L
Sbjct: 131 LPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL 190

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L NN L+ LP EIGK+  L+ L L+ N ++TL         P  ++ L+          
Sbjct: 191 YLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTL---------PQEIEKLQKL-------- 233

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              + L L    L+ +P EI +  ++  L L  N +  LP E+ 
Sbjct: 234 -------------------QWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIG 274

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+ L L+ N++   P  I   L +L  L L +N L  +P +    +  LQ+LDL  
Sbjct: 275 QLQNLKVLFLNNNQLTTIPQEI-GHLQNLQDLYLVSNQLTTIPKE-IGQLQNLQMLDLGN 332

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +  LP+      L +LQELYL   QL   P +I +LQ L+ L LS N L +IP+    
Sbjct: 333 NQLTILPK--EIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQ 390

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           L +L EL LS+N +  +P E+G L+ +LQ L L  N
Sbjct: 391 LQNLQELYLSNNQLITIPKEIGQLQ-NLQTLYLRNN 425



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 119/355 (33%), Positives = 180/355 (50%), Gaps = 20/355 (5%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL + ++ ++P  I    +L    + +N L  LP E+ +L  L  LDL  NQL     E
Sbjct: 52  LDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIILPKE 111

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L +LDL +N L+ LP EIGK+  L++L L+ N L T    +       L K   
Sbjct: 112 IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEI-----GKLQKLQW 166

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
             L  N+        E L  + +        L L    L+ +P EI +  ++  L+LS N
Sbjct: 167 LNLSANQIKTIPKEIEKLQKLQS--------LYLPNNQLTTLPQEIGKLQKLQWLNLSYN 218

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            I+ LP E+     LQ L L +N++   P  I   L  L  L LDNN L  +P +    +
Sbjct: 219 QIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEI-EKLQKLESLGLDNNQLTTLPQE-IGQL 276

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L++L L+ N + ++P+      L +LQ+LYL   QL   P +I +LQ L++LDL  N 
Sbjct: 277 QNLKVLFLNNNQLTTIPQ--EIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQ 334

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L  +P+    L +L EL LS+N ++ +P E+G L+ +LQ L L  N L +I + I
Sbjct: 335 LTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQ-NLQELYLSNNQLTTIPKEI 388



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 145/291 (49%), Gaps = 19/291 (6%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS   L  LP +IG++  L+ L L+ N L  L         P  ++ L++   
Sbjct: 47  LDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIIL---------PKEIRQLKNL-- 95

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
             +  + S  +  ++    R     + L L    L+ +P EI +   + +L LS N +  
Sbjct: 96  --QMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTT 153

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
            P E+     LQ L LS N+IK  P  I   L  L  L L NN L  +P +  K +  LQ
Sbjct: 154 FPKEIGKLQKLQWLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQEIGK-LQKLQ 211

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L+LSYN I +LP+      L  LQ LYL + QL   P +I +LQ+L  L L  N L ++
Sbjct: 212 WLNLSYNQIKTLPQ--EIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTL 269

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P+    L +L  L L++N ++ +P E+G L+ +LQ L L  N L +I + I
Sbjct: 270 PQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQ-NLQDLYLVSNQLTTIPKEI 319



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 111/230 (48%), Gaps = 28/230 (12%)

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
           E +  E   T +DL T A +  +  + L L    L A+P +I +   +  LDLS N +  
Sbjct: 26  EIQACEEPGTYQDL-TKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLII 84

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQ L LS N++   P  I   L +L  L L +N L  +P +         
Sbjct: 85  LPKEIRQLKNLQMLDLSDNQLIILPKEI-RQLKNLQMLDLRSNQLTILPKE--------- 134

Query: 294 ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
                              L +LQELYL   QL   P +I +LQ+L+ L+LS N +++IP
Sbjct: 135 ----------------IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIP 178

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           +  + L  L  L L +N ++ LP E+G L+  LQ L L  N ++++ + I
Sbjct: 179 KEIEKLQKLQSLYLPNNQLTTLPQEIGKLQ-KLQWLNLSYNQIKTLPQEI 227



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT+L    I     L EL  S N L  +P+ IG L  L  L L  N++ +
Sbjct: 325 LQMLDLGNNQLTILPKE-IGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTT 383

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 104
           IP  I    +L E Y+ NN L  +P E+G+L  L TL L +NQ 
Sbjct: 384 IPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQF 427


>gi|421110777|ref|ZP_15571268.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803874|gb|EKS10001.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 390

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/363 (33%), Positives = 181/363 (49%), Gaps = 43/363 (11%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +PE IG L  L  L+L +N++ ++P  I     L +  +G N ++ LP E+G+L  L
Sbjct: 49  LTALPEEIGKLQNLQELNLWENKLTTLPQEIGNLQYLQKLDLGFNKITVLPKEIGQLQSL 108

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L+L  NQL     E   L+ L  L L  N  + LP EIGK+  L+++  + N L TL 
Sbjct: 109 QELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQEMESSKNQLTTLP 168

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
             + N      L+ L+                              EL L    L+A+P 
Sbjct: 169 KEIGN------LQNLQ------------------------------ELYLNENQLTALPI 192

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           EI     + KL L+RN +  LP E+ +  +LQ L+L+RN++   P  I  +L +L  L L
Sbjct: 193 EIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQKLVLNRNQLTALPIEI-GNLQNLQGLNL 251

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
           D N L  +P +  + +  LQ L L  N + +LP      +L  L+ L L + QL   P +
Sbjct: 252 DKNQLTTLPKE-IRKLQNLQGLHLGNNKLTALP--IEIGNLQKLKWLGLNKNQLTTIPKE 308

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
           I  LQ L+ L+LS N L +IP+  +NL  L  LDL +N ++ LP E+G L+ +LQ L L 
Sbjct: 309 IGNLQNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGNLQ-NLQRLYLG 367

Query: 393 GNP 395
           GNP
Sbjct: 368 GNP 370



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 160/332 (48%), Gaps = 66/332 (19%)

Query: 74  FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE 132
            Y+    L+ALP E+GKL  L  L+L  N+L     E   L+ L  LDL  N ++ LP E
Sbjct: 42  LYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQEIGNLQYLQKLDLGFNKITVLPKE 101

Query: 133 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 192
           IG++ +L++L L+ N L TL   + N      L++L+                       
Sbjct: 102 IGQLQSLQELNLSFNQLATLPKEIGN------LQHLK----------------------- 132

Query: 193 RLSVTSKELSLEGMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 251
           RL +        G+N  +A+P EI +   + +++ S+N +  LP E+ +  +LQ L L+ 
Sbjct: 133 RLFL--------GLNQFTALPEEIGKLQNLQEMESSKNQLTTLPKEIGNLQNLQELYLNE 184

Query: 252 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFS 311
           N++   P  I  +L +L  L L+ N L  +P +                           
Sbjct: 185 NQLTALPIEI-GNLQNLQKLVLNRNQLTALPIE-------------------------IG 218

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           +L +LQ+L L R QL   P +I  LQ L+ L+L +N L ++P+  + L +L  L L +N 
Sbjct: 219 NLQNLQKLVLNRNQLTALPIEIGNLQNLQGLNLDKNQLTTLPKEIRKLQNLQGLHLGNNK 278

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           ++ALP E+G L+  L+ L L+ N L +I + I
Sbjct: 279 LTALPIEIGNLQ-KLKWLGLNKNQLTTIPKEI 309



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 130/278 (46%), Gaps = 16/278 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  N+L  L    I +   L  L    N    +PE IG L  L  ++  +N++ +
Sbjct: 108 LQELNLSFNQLATLPKE-IGNLQHLKRLFLGLNQFTALPEEIGKLQNLQEMESSKNQLTT 166

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+  N L+ALP E+G L  L  L L+ NQL    +E   L+ L  L
Sbjct: 167 LPKEIGNLQNLQELYLNENQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQKL 226

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L+ N L+ LP EIG +  L+ L L  N L TL         P  ++ L++    +  + 
Sbjct: 227 VLNRNQLTALPIEIGNLQNLQGLNLDKNQLTTL---------PKEIRKLQNLQGLHLGNN 277

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             T     I    +L    K L L    L+ IP EI     + +L+LS N +  +P E+ 
Sbjct: 278 KLTALPIEIGNLQKL----KWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIE 333

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
           +   L+TL L  N++   P  I  +L +L  L L  NP
Sbjct: 334 NLQKLETLDLYNNQLTTLPKEI-GNLQNLQRLYLGGNP 370



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 33/224 (14%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
           D+E  +   + +   T++ V    L L G  L+A+P EI +   + +L+L  N +  LP 
Sbjct: 22  DAEDYSKLNEALQNPTQVRV----LYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQ 77

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+ +   LQ L L  NKI   P  I                           +  LQ L+
Sbjct: 78  EIGNLQYLQKLDLGFNKITVLPKEI-------------------------GQLQSLQELN 112

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           LS+N +A+LP+     +L HL+ L+L   Q    P +I +LQ L+ ++ S+N L ++P+ 
Sbjct: 113 LSFNQLATLPK--EIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQEMESSKNQLTTLPKE 170

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
             NL +L EL L++N ++ALP E+G L+ +LQ L L+ N L ++
Sbjct: 171 IGNLQNLQELYLNENQLTALPIEIGNLQ-NLQKLVLNRNQLTAL 213


>gi|418719292|ref|ZP_13278492.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410744445|gb|EKQ93186.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 399

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 129/370 (34%), Positives = 189/370 (51%), Gaps = 49/370 (13%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L LH N   ++P  I    +L E Y+ +N L  LP E+GKL K+  L L +NQL     +
Sbjct: 47  LSLHNNE--TLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKD 104

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L +L  LDL+NN L+ LP EIG++  LR+L L  N L+TL   +        L+ LR
Sbjct: 105 IGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDI------GQLQNLR 158

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                                         EL L+G  L  +P +I +   +T+L+L+ N
Sbjct: 159 ------------------------------ELYLDGNQLKTLPKDIGKLQNLTELNLTNN 188

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKD 288
            +  LP ++ +  +L  L+L  N++   P  I   L +L  L L    L  +P+D G+  
Sbjct: 189 PLTTLPKDIGNLKNLGELLLINNELTTLPKEI-GKLKNLQVLYL-GALLTTLPNDIGY-- 244

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  L+ L+LS N I +LP++     L +LQ LYL   QL   P +I +LQ LR LDLS N
Sbjct: 245 LKSLRELNLSGNQITTLPKD--IGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGN 302

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
            + ++P+    L SL EL+LS N I+ LP E+G L+ SL+ L L GN + +I + I    
Sbjct: 303 QITTLPKEIGELQSLRELNLSGNQITTLPKEIGKLQ-SLRELNLGGNQITTIPKEIGHLK 361

Query: 408 TKAVLKYLKD 417
              VL YL D
Sbjct: 362 NLQVL-YLDD 370



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 163/353 (46%), Gaps = 43/353 (12%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     LTEL  S N L  +P+ IG L ++ RL L  N++ ++P  I     L E  + N
Sbjct: 59  IGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTN 118

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP E+G+L  L  L L++NQLK    +  QL+ L  L L  N L  LP +IGK+ 
Sbjct: 119 NLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQ 178

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS-V 196
            L +L LT NPL TL   + N      LK L          E      +L T+   +  +
Sbjct: 179 NLTELNLTNNPLTTLPKDIGN------LKNL---------GELLLINNELTTLPKEIGKL 223

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
            + ++   G  L+ +P++I     + +L+LS N I  LP ++    +LQ L LS N++  
Sbjct: 224 KNLQVLYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLAT 283

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 316
            P  I   L +L  L L  N +  +P +                            L  L
Sbjct: 284 LPKEI-GQLQNLRELDLSGNQITTLPKE-------------------------IGELQSL 317

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
           +EL L   Q+   P +I +LQ LR L+L  N + +IP+   +L +L  L L D
Sbjct: 318 RELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDD 370



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 165/348 (47%), Gaps = 54/348 (15%)

Query: 91  LSKLGTL---------DLHSNQLKEY--CVEACQ--LRLSVLDLSNNSLSGLPPEIGKMT 137
           L K+GTL          L + ++  Y    EA Q    + +L L NN    LP EIG++ 
Sbjct: 6   LQKIGTLILILLCFLSQLKAQEIGTYHNLTEALQNPTDVRILSLHNNE--TLPKEIGELQ 63

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L+ N L+TL   +       L K  R  L  N   + +T  +D+  +       
Sbjct: 64  NLTELYLSSNQLKTLPKEI-----GKLQKIERLSLSNN---QLTTLPKDIGKLKKL---- 111

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    L+ +P EI +   + +L L  N ++ LP ++    +L+ L L  N++K  
Sbjct: 112 -RELDLTNNLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQLKTL 170

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSD----------------------GFKDIPMLQIL 295
           P  I   L +L+ L L NNPL  +P D                          +  LQ+L
Sbjct: 171 PKDI-GKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVL 229

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
            L   + +LP +  +  L  L+EL L   Q+   P DI +LQ L++L LS+N L ++P+ 
Sbjct: 230 YLGALLTTLPNDIGY--LKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKE 287

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L +L ELDLS N I+ LP E+G L+ SL+ L L GN + ++ + I
Sbjct: 288 IGQLQNLRELDLSGNQITTLPKEIGELQ-SLRELNLSGNQITTLPKEI 334


>gi|421127222|ref|ZP_15587446.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136033|ref|ZP_15596144.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019767|gb|EKO86581.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435312|gb|EKP84444.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 427

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 191/396 (48%), Gaps = 44/396 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L    I     L  L    N L  +P+ I  L  L  LDL  N++  
Sbjct: 52  LQMLDLSDNQLIILPKE-IRQLKNLQMLDLRSNQLIILPKEIRQLKNLQMLDLRSNQLTI 110

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I    +L E Y+ NN L+  P E+GKL KL  L+L +NQ+K    E  +L +L  L
Sbjct: 111 LPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL 170

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L NN L+ LP EIGK+  L+ L L+ N ++TL         P  ++ L+          
Sbjct: 171 YLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTL---------PQEIEKLQKL-------- 213

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              + L L    L+ +P EI +  ++  L L  N +  LP E+ 
Sbjct: 214 -------------------QWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIG 254

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+ L L+ N++   P  I   L +L  L L +N L  +P +    +  LQ+LDL  
Sbjct: 255 QLQNLKVLFLNNNQLTTIPQEI-GHLQNLQDLYLVSNQLTTIPKE-IGQLQNLQMLDLGN 312

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +  LP+      L +LQELYL   QL   P +I +LQ L+ L LS N L +IP+    
Sbjct: 313 NQLTILPKE--IGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQ 370

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           L +L EL LS+N +  +P E+G L+ +LQ L L  N
Sbjct: 371 LQNLQELYLSNNQLITIPKEIGQLQ-NLQTLYLRNN 405



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/355 (33%), Positives = 180/355 (50%), Gaps = 20/355 (5%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL + ++ ++P  I    +L    + +N L  LP E+ +L  L  LDL SNQL     E
Sbjct: 32  LDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLIILPKE 91

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L +LDL +N L+ LP EIGK+  L++L L+ N L T    +       L K   
Sbjct: 92  IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEI-----GKLQKLQW 146

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
             L  N+        E L  + +        L L    L+ +P EI +  ++  L LS N
Sbjct: 147 LNLSANQIKTIPKEIEKLQKLQS--------LYLPNNQLTTLPQEIGKLQKLQWLYLSYN 198

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            I+ LP E+     LQ L L +N++   P  I   L  L  L LDNN L  +P +    +
Sbjct: 199 QIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEI-EKLQKLESLGLDNNQLTTLPQE-IGQL 256

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L++L L+ N + ++P+      L +LQ+LYL   QL   P +I +LQ L++LDL  N 
Sbjct: 257 QNLKVLFLNNNQLTTIPQE--IGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQ 314

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L  +P+    L +L EL LS+N ++ +P E+G L+ +LQ L L  N L +I + I
Sbjct: 315 LTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQ-NLQELYLSNNQLTTIPKEI 368



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 141/293 (48%), Gaps = 23/293 (7%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS   L  LP +IG++  L+ L L+ N L  L   +       +L  LRS   
Sbjct: 27  LDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLD-LRSN-- 83

Query: 174 ENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 231
                        LI +   +      + L L    L+ +P EI +   + +L LS N +
Sbjct: 84  ------------QLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQL 131

Query: 232 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 291
              P E+     LQ L LS N+IK  P  I   L  L  L L NN L  +P +  K +  
Sbjct: 132 TTFPKEIGKLQKLQWLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQEIGK-LQK 189

Query: 292 LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
           LQ L LSYN I +LP+      L  LQ LYL + QL   P +I +LQ+L  L L  N L 
Sbjct: 190 LQWLYLSYNQIKTLPQE--IEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLT 247

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           ++P+    L +L  L L++N ++ +P E+G L+ +LQ L L  N L +I + I
Sbjct: 248 TLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQ-NLQDLYLVSNQLTTIPKEI 299



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 110/230 (47%), Gaps = 28/230 (12%)

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
           E +  E   T +DL T A +  +  + L L    L A+P +I +   +  LDLS N +  
Sbjct: 6   EIQACEEPGTYQDL-TKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLII 64

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQ L L  N++   P  I   L +L  L L +N L  +P +         
Sbjct: 65  LPKEIRQLKNLQMLDLRSNQLIILPKEI-RQLKNLQMLDLRSNQLTILPKE--------- 114

Query: 294 ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
                              L +LQELYL   QL   P +I +LQ+L+ L+LS N +++IP
Sbjct: 115 ----------------IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIP 158

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           +  + L  L  L L +N ++ LP E+G L+  LQ L L  N ++++ + I
Sbjct: 159 KEIEKLQKLQSLYLPNNQLTTLPQEIGKLQ-KLQWLYLSYNQIKTLPQEI 207



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT+L    I     L EL  S N L  +P+ IG L  L  L L  N++ +
Sbjct: 305 LQMLDLGNNQLTILPKE-IGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTT 363

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 104
           IP  I    +L E Y+ NN L  +P E+G+L  L TL L +NQ 
Sbjct: 364 IPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQF 407


>gi|417764010|ref|ZP_12411983.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353842|gb|EJP05995.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 427

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 192/396 (48%), Gaps = 44/396 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L    I     L  L  S N L  +P+ I  L  L  LDL  N++  
Sbjct: 52  LQMLDLSDNQLIILPKE-IRQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTI 110

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I    +L E Y+ NN L+  P E+GKL KL  L+L +NQ+K    E  +L +L  L
Sbjct: 111 LPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL 170

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L NN L+ LP EIGK+  L+ L L+ N ++TL         P  ++ L+          
Sbjct: 171 YLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTL---------PQEIEKLQKL-------- 213

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              + L L    L+ +P EI +  ++  L L  N +  LP E+ 
Sbjct: 214 -------------------QWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIG 254

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+ L L+ N++   P  I   L +L  L L +N L  +P +    +  LQ+LDL  
Sbjct: 255 QLQNLKVLFLNNNQLTTIPQEI-GHLQNLQDLYLVSNQLTTIPKE-IGQLQNLQMLDLGN 312

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +  LP+      L +LQELYL   QL   P +I +LQ L+ L LS N L +IP+    
Sbjct: 313 NQLTILPK--EIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQ 370

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           L +L EL LS+N +  +P E+G L+ +LQ L L  N
Sbjct: 371 LQNLQELYLSNNQLITIPKEIGQLQ-NLQTLYLRNN 405



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 119/355 (33%), Positives = 180/355 (50%), Gaps = 20/355 (5%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL + ++ ++P  I    +L    + +N L  LP E+ +L  L  LDL  NQL     E
Sbjct: 32  LDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIILPKE 91

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L +LDL +N L+ LP EIGK+  L++L L+ N L T    +       L K   
Sbjct: 92  IRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEI-----GKLQKLQW 146

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
             L  N+        E L  + +        L L    L+ +P EI +  ++  L+LS N
Sbjct: 147 LNLSANQIKTIPKEIEKLQKLQS--------LYLPNNQLTTLPQEIGKLQKLQWLNLSYN 198

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            I+ LP E+     LQ L L +N++   P  I   L  L  L LDNN L  +P +    +
Sbjct: 199 QIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEI-EKLQKLESLGLDNNQLTTLPQE-IGQL 256

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L++L L+ N + ++P+      L +LQ+LYL   QL   P +I +LQ L++LDL  N 
Sbjct: 257 QNLKVLFLNNNQLTTIPQ--EIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQ 314

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L  +P+    L +L EL LS+N ++ +P E+G L+ +LQ L L  N L +I + I
Sbjct: 315 LTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQ-NLQELYLSNNQLTTIPKEI 368



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 145/291 (49%), Gaps = 19/291 (6%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS   L  LP +IG++  L+ L L+ N L  L         P  ++ L++   
Sbjct: 27  LDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIIL---------PKEIRQLKNL-- 75

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
             +  + S  +  ++    R     + L L    L+ +P EI +   + +L LS N +  
Sbjct: 76  --QMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTT 133

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
            P E+     LQ L LS N+IK  P  I   L  L  L L NN L  +P +  K +  LQ
Sbjct: 134 FPKEIGKLQKLQWLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQEIGK-LQKLQ 191

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L+LSYN I +LP+      L  LQ LYL + QL   P +I +LQ+L  L L  N L ++
Sbjct: 192 WLNLSYNQIKTLPQ--EIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTL 249

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P+    L +L  L L++N ++ +P E+G L+ +LQ L L  N L +I + I
Sbjct: 250 PQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQ-NLQDLYLVSNQLTTIPKEI 299



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 28/225 (12%)

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E   T +DL T A +  +  + L L    L A+P +I +   +  LDLS N +  LP E+
Sbjct: 11  EEPGTYQDL-TKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEI 69

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
               +LQ L LS N++   P  I   L +L  L L +N L  +P +              
Sbjct: 70  RQLKNLQMLDLSDNQLIILPKEI-RQLKNLQMLDLRSNQLTILPKE-------------- 114

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
                         L +LQELYL   QL   P +I +LQ+L+ L+LS N +++IP+  + 
Sbjct: 115 -----------IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEK 163

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L  L  L L +N ++ LP E+G L+  LQ L L  N ++++ + I
Sbjct: 164 LQKLQSLYLPNNQLTTLPQEIGKLQ-KLQWLNLSYNQIKTLPQEI 207



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT+L    I     L EL  S N L  +P+ IG L  L  L L  N++ +
Sbjct: 305 LQMLDLGNNQLTILPKE-IGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTT 363

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 104
           IP  I    +L E Y+ NN L  +P E+G+L  L TL L +NQ 
Sbjct: 364 IPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQF 407


>gi|418707316|ref|ZP_13268142.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772363|gb|EKR47551.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 424

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 131/393 (33%), Positives = 189/393 (48%), Gaps = 44/393 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+   KL  L    I     L  L  S N L  +P+ I  L  L  LDL  N++  +P 
Sbjct: 52  LDLSEQKLKALPKK-IGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPK 110

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I    +L E Y+ NN L+  P E+GKL KL  L+L +NQ+K    E  +L +L  L L 
Sbjct: 111 EIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLP 170

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN L+ LP EIGK+  L+ L L+ N ++TL         P  ++ L+             
Sbjct: 171 NNQLTTLPQEIGKLQKLQWLYLSYNQIKTL---------PQEIEKLQKL----------- 210

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                           + L L    L+ +P EI +  ++  L L  N +  LP E+    
Sbjct: 211 ----------------QWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQ 254

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +L+ L L+ N++   P  I   L +L  L L +N L  +P +    +  LQ+LDL  N +
Sbjct: 255 NLKVLFLNNNQLTTIPQEI-GHLQNLQDLYLVSNQLTTIPKE-IGQLQNLQMLDLGNNQL 312

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
             LP+      L +LQELYL   QL   P +I +LQ L+ L LS N L +IP+    L +
Sbjct: 313 TILPK--EIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQN 370

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           L EL LS+N +  +P E+G L+ +LQ L L  N
Sbjct: 371 LQELYLSNNQLITIPKEIGQLQ-NLQTLYLRNN 402



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/355 (32%), Positives = 160/355 (45%), Gaps = 42/355 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT+L    I     L EL  S N L   P+ IG L +L  L+L  N+I +
Sbjct: 95  LQMLDLRSNQLTILPKE-IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKT 153

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  I     L   Y+ NN L+ LP E+GKL KL  L L  NQ+K    E  +L +L  L
Sbjct: 154 IPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWL 213

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N L+ LP EI K+  L  L L  N L TL   +        L+ L+     N  ++
Sbjct: 214 YLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEI------GQLQNLKVLFLNN--NQ 265

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            +T  +++  +        ++L L    L+ IP EI +   +  LDL  N +  LP E+ 
Sbjct: 266 LTTIPQEIGHLQNL-----QDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIG 320

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +LQ L LS N++   P  I   L +L  L L NN L  +P +               
Sbjct: 321 KLQNLQELYLSNNQLTTIPKEI-GQLQNLQELYLSNNQLTTIPKE--------------- 364

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
                        L +LQELYL   QL   P +I +LQ L+ L L  N   SI E
Sbjct: 365 ----------IGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQF-SIEE 408



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 157/326 (48%), Gaps = 43/326 (13%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR-- 171
           L + VLDLS   L  LP +IG++  L+ L L+ N L  L   +       +L  LRS   
Sbjct: 47  LDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLD-LRSNQL 105

Query: 172 --LPENEDSEASTTKEDLITMATRLSVTSKEL----SLEGMNLSA-----IPSEIWEAGE 220
             LP+ E  +    +E L     +L+   KE+     L+ +NLSA     IP EI +  +
Sbjct: 106 TILPK-EIGKLQNLQE-LYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQK 163

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI------------------- 261
           +  L L  N +  LP E+     LQ L LS N+IK  P  I                   
Sbjct: 164 LQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTL 223

Query: 262 ---LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
              +  L  L  L LDNN L  +P +    +  L++L L+ N + ++P+      L +LQ
Sbjct: 224 PQEIEKLQKLESLGLDNNQLTTLPQE-IGQLQNLKVLFLNNNQLTTIPQ--EIGHLQNLQ 280

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +LYL   QL   P +I +LQ L++LDL  N L  +P+    L +L EL LS+N ++ +P 
Sbjct: 281 DLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPK 340

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
           E+G L+ +LQ L L  N L +I + I
Sbjct: 341 EIGQLQ-NLQELYLSNNQLTTIPKEI 365



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/231 (34%), Positives = 119/231 (51%), Gaps = 7/231 (3%)

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
           E +  E   T +DL T A +  +  + L L    L A+P +I +   +  LDLS N +  
Sbjct: 26  EIQACEEPGTYQDL-TKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLII 84

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQ L L  N++   P  I   L +L  L L NN L   P +  K +  LQ
Sbjct: 85  LPKEIRQLKNLQMLDLRSNQLTILPKEI-GKLQNLQELYLSNNQLTTFPKEIGK-LQKLQ 142

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L+LS N I ++P+      L  LQ LYL   QL   P +I +LQ+L+ L LS N ++++
Sbjct: 143 WLNLSANQIKTIPK--EIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTL 200

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P+  + L  L  L L  N ++ LP E+  L+  L++L LD N L ++ + I
Sbjct: 201 PQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQ-KLESLGLDNNQLTTLPQEI 250


>gi|391333506|ref|XP_003741154.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Metaseiulus occidentalis]
          Length = 608

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 199/426 (46%), Gaps = 64/426 (15%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           + N L  +P  + S+ +L+ LDL  N +  +P +I  C  L +    +N L  LP    +
Sbjct: 210 ANNCLEALPADMDSMIQLVLLDLSNNCLTKLPEAIGRCGHLEQLVARHNRLETLPP-FSR 268

Query: 91  LSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKL------ 142
            + L  L +  N +KE+ V  C+  + L +LDL +N L+ LP EI  + +L +L      
Sbjct: 269 ENHLKELSVSFNAIKEFNVGHCEALVMLKILDLRSNKLASLPEEIANLQSLERLDIGNNE 328

Query: 143 -----------------LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA----- 180
                            L+ GNPLR++R  ++   T  L+KYLR RL E+   +      
Sbjct: 329 LKILPNSLGALNHINSLLVEGNPLRSIRQDILRRGTVYLMKYLRDRLKESPMQQKIRKSR 388

Query: 181 STTKEDLITMATRLSV-TSKELSLEGMNLSAIPSEIWEAG---EITKLDLSRNSIQELPP 236
               ++L+    R ++ +SK L      LS +  ++ +     +I +L L+RN    +P 
Sbjct: 389 GGDGQELVDSVDRFTLKSSKTLDFSNKALSTLDEKVIDMACEDKINQLVLTRNIFVTVPD 448

Query: 237 ELSSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            L   A  L  L  S NK+   P   L+    L  + L +N L  +P             
Sbjct: 449 TLERLAQQLTELDFSFNKLTSIP-PFLSQAKHLQYMNLQSNQLSDLP------------- 494

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP-E 354
                       P  S L +++EL + + +  + P  +   ++  IL  S NSL SI  E
Sbjct: 495 ------------PELSCLENIRELNISQNRFSKIPDCVYGWKRFEILLASDNSLTSIDVE 542

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
               + +L  LDL +N+IS +PPELG L   +++L+LDGN  R+ R  IL + T+ +L Y
Sbjct: 543 NLAKIETLATLDLRNNSISQVPPELGNL-IQIKSLQLDGNLFRNPRPAILAKSTQDILAY 601

Query: 415 LKDKIP 420
           L+D+IP
Sbjct: 602 LRDRIP 607



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 48/266 (18%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-------- 252
           L L+  N+S +P ++     + +L+LS N + ELP  L     L+ L L  N        
Sbjct: 115 LELQDNNISKLPQQMESLSNLIRLNLSHNKMTELPDCLCHLKDLRVLALHHNEIKSVSDN 174

Query: 253 ---------------KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
                          K+K+ PDA  T LS    + L NN L  +P+D    +  L +LDL
Sbjct: 175 INSLLSLDDLDLSHNKLKELPDA-FTFLSRTKKINLANNCLEALPAD-MDSMIQLVLLDL 232

Query: 298 SYN-IASLPEN--------------------PPFSSLPHLQELYLRRMQLREAPTDILR- 335
           S N +  LPE                     PPFS   HL+EL +    ++E        
Sbjct: 233 SNNCLTKLPEAIGRCGHLEQLVARHNRLETLPPFSRENHLKELSVSFNAIKEFNVGHCEA 292

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L  L+ILDL  N L S+PE   NL SL  LD+ +N +  LP  LG L   + +L ++GNP
Sbjct: 293 LVMLKILDLRSNKLASLPEEIANLQSLERLDIGNNELKILPNSLGALN-HINSLLVEGNP 351

Query: 396 LRSIRRTILDRGTKAVLKYLKDKIPE 421
           LRSIR+ IL RGT  ++KYL+D++ E
Sbjct: 352 LRSIRQDILRRGTVYLMKYLRDRLKE 377


>gi|428298451|ref|YP_007136757.1| small GTP-binding protein [Calothrix sp. PCC 6303]
 gi|428234995|gb|AFZ00785.1| small GTP-binding protein [Calothrix sp. PCC 6303]
          Length = 1408

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 200/400 (50%), Gaps = 29/400 (7%)

Query: 18  LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           LIA  + L EL  S N +  +PE I  LS L  L +  N+I  IP +I+   +L E ++ 
Sbjct: 144 LIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQITEIPEAIANLSNLRELHVS 203

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 136
           +N ++ +P  + KL  L  L + SN++ E      +L  L  L L NN ++ +P  I K+
Sbjct: 204 SNQITEIPEAIAKLINLRELQVSSNKITEIPEVIAKLTNLRKLYLRNNQITEIPEVIAKL 263

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           T L +L L+ N +  +  +L       L+   +  L  N+ +E       LI + T+L +
Sbjct: 264 TNLTQLDLSYNQITKISEALA-----KLINLTQIILHNNKITEIPDALAKLINL-TQLDL 317

Query: 197 TSKELS----------------LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
           +  +++                L    ++ IP  I +   +T+LDLS N I ++P  L+ 
Sbjct: 318 SYNQITKIPEALAKLTNLTQLILYSNQITEIPEVIAKLTNLTQLDLSYNQITKIPEALAK 377

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             +L  LIL  N+I + P+A L  L +L+ + L  N + ++P +    +  L  LDLSYN
Sbjct: 378 LTNLTQLILYSNRISEIPEA-LAKLINLTQIILSYNRISEIP-EALAKLTNLTQLDLSYN 435

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            I  +PE    + L +L ++ L   ++ E P  + +L  LR L LS N +  IPE    L
Sbjct: 436 QITKIPE--ALAKLINLTQIILHSNKITEIPEALAKLTNLRQLYLSYNRITEIPEALAKL 493

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           T+LT+L+LSDN I  +P  L  L  +L  L L+ N +  I
Sbjct: 494 TNLTQLNLSDNQIIKIPKALAKL-SNLTQLDLNRNKITEI 532



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 205/411 (49%), Gaps = 18/411 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+ GN L  + + ++     L ELI  +  L  +PE I +LS L +L  + N I  
Sbjct: 82  LRKLDISGNPLESIPD-VVTQILHLEELILIRVELTEIPEAIANLSNLTQLYFNSNHISK 140

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  I+   +L E ++ +N ++ +P  + KLS L  L + SNQ+ E       L  L  L
Sbjct: 141 IPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQITEIPEAIANLSNLREL 200

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR----SRLPEN 175
            +S+N ++ +P  I K+  LR+L ++ N +  +   ++   T     YLR    + +PE 
Sbjct: 201 HVSSNQITEIPEAIAKLINLRELQVSSNKITEI-PEVIAKLTNLRKLYLRNNQITEIPEV 259

Query: 176 EDSEASTTKEDL-ITMATRLS------VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
                + T+ DL     T++S      +   ++ L    ++ IP  + +   +T+LDLS 
Sbjct: 260 IAKLTNLTQLDLSYNQITKISEALAKLINLTQIILHNNKITEIPDALAKLINLTQLDLSY 319

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N I ++P  L+   +L  LIL  N+I + P+ I   L++L+ L L  N + ++P    K 
Sbjct: 320 NQITKIPEALAKLTNLTQLILYSNQITEIPEVI-AKLTNLTQLDLSYNQITKIPEALAKL 378

Query: 289 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             + Q++  S  I+ +PE    + L +L ++ L   ++ E P  + +L  L  LDLS N 
Sbjct: 379 TNLTQLILYSNRISEIPE--ALAKLINLTQIILSYNRISEIPEALAKLTNLTQLDLSYNQ 436

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           +  IPE    L +LT++ L  N I+ +P  L  L  +L+ L L  N +  I
Sbjct: 437 ITKIPEALAKLINLTQIILHSNKITEIPEALAKL-TNLRQLYLSYNRITEI 486



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 190/379 (50%), Gaps = 44/379 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N++T +   +IA  T LT+L  S N +  + E +  L  L ++ LH N+I  
Sbjct: 243 LRKLYLRNNQITEIPE-VIAKLTNLTQLDLSYNQITKISEALAKLINLTQIILHNNKITE 301

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP +++   +L +  +  N ++ +P  L KL+ L  L L+SNQ+ E      +L  L+ L
Sbjct: 302 IPDALAKLINLTQLDLSYNQITKIPEALAKLTNLTQLILYSNQITEIPEVIAKLTNLTQL 361

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DLS N ++ +P  + K+T L +L+L  N +                    S +PE     
Sbjct: 362 DLSYNQITKIPEALAKLTNLTQLILYSNRI--------------------SEIPE----- 396

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                     +A  +++T  ++ L    +S IP  + +   +T+LDLS N I ++P  L+
Sbjct: 397 ---------ALAKLINLT--QIILSYNRISEIPEALAKLTNLTQLDLSYNQITKIPEALA 445

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L  +IL  NKI + P+A L  L++L  L L  N + ++P +    +  L  L+LS 
Sbjct: 446 KLINLTQIILHSNKITEIPEA-LAKLTNLRQLYLSYNRITEIP-EALAKLTNLTQLNLSD 503

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N I  +P+    + L +L +L L R ++ E P  + +L  L  L L  N +  IPE    
Sbjct: 504 NQIIKIPK--ALAKLSNLTQLDLNRNKITEIPEALAKLTNLTQLYLRNNRITEIPEALAK 561

Query: 359 LTSLTELDLSDN-NISALP 376
           LT+LT+LDL  N NIS +P
Sbjct: 562 LTNLTQLDLGTNYNISEIP 580



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 204/425 (48%), Gaps = 67/425 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  N++T +   +IA  T LT+L  S N +  +PE +  L+ L +L L+ NRI  
Sbjct: 335 LTQLILYSNQITEIPE-VIAKLTNLTQLDLSYNQITKIPEALAKLTNLTQLILYSNRISE 393

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP +++   +L +  +  N +S +P  L KL+ L  LDL  NQ+ +      +L  L+ +
Sbjct: 394 IPEALAKLINLTQIILSYNRISEIPEALAKLTNLTQLDLSYNQITKIPEALAKLINLTQI 453

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +N ++ +P  + K+T LR+L L+ N +                    + +PE     
Sbjct: 454 ILHSNKITEIPEALAKLTNLRQLYLSYNRI--------------------TEIPE----- 488

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                     +A   ++T  +L+L    +  IP  + +   +T+LDL+RN I E+P  L+
Sbjct: 489 ---------ALAKLTNLT--QLNLSDNQIIKIPKALAKLSNLTQLDLNRNKITEIPEALA 537

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L  L L  N+I + P+A L  L++L+ L L  N                      Y
Sbjct: 538 KLTNLTQLYLRNNRITEIPEA-LAKLTNLTQLDLGTN----------------------Y 574

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           NI+ +PE    + L +L +L L   Q+ E P  I +L  L  L+L+ N +  IPE    L
Sbjct: 575 NISEIPE--AITKLTNLTQLNLTSSQITEIPEVIAKLTNLTQLNLTSNQIAEIPEAIAKL 632

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI--LDRGTKAVLKYLK- 416
           T+LT+L L+ N I+ +P  +  L  +L  L L  N +  I   I  L   T+ +L Y + 
Sbjct: 633 TNLTQLILTSNQITEIPEAIAKL-TNLTQLNLTSNQITKIPEAIAKLTNLTQLILSYNQI 691

Query: 417 DKIPE 421
            +IPE
Sbjct: 692 TEIPE 696



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 171/356 (48%), Gaps = 21/356 (5%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
            S N L  +P  +  L  L +LD+  N + SIP  ++    L E  +    L+ +P  + 
Sbjct: 64  VSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPEAIA 123

Query: 90  KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
            LS L  L  +SN + +      +L  L  L +S+N ++ +P  I K++ LR+L ++ N 
Sbjct: 124 NLSNLTQLYFNSNHISKIPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQ 183

Query: 149 LRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 207
           +  +  ++ N      L  LR   +  N+ +E       LI +        +EL +    
Sbjct: 184 ITEIPEAIAN------LSNLRELHVSSNQITEIPEAIAKLINL--------RELQVSSNK 229

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           ++ IP  I +   + KL L  N I E+P  ++   +L  L LS N+I    +A L  L +
Sbjct: 230 ITEIPEVIAKLTNLRKLYLRNNQITEIPEVIAKLTNLTQLDLSYNQITKISEA-LAKLIN 288

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L+ + L NN + ++P D    +  L  LDLSYN I  +PE    + L +L +L L   Q+
Sbjct: 289 LTQIILHNNKITEIP-DALAKLINLTQLDLSYNQITKIPE--ALAKLTNLTQLILYSNQI 345

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
            E P  I +L  L  LDLS N +  IPE    LT+LT+L L  N IS +P  L  L
Sbjct: 346 TEIPEVIAKLTNLTQLDLSYNQITKIPEALAKLTNLTQLILYSNRISEIPEALAKL 401



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 152/290 (52%), Gaps = 41/290 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +A  T LT+L  S N +  +P+ +  LS L +LDL++N+I  IP +++   +L + Y+ N
Sbjct: 490 LAKLTNLTQLNLSDNQIIKIPKALAKLSNLTQLDLNRNKITEIPEALAKLTNLTQLYLRN 549

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKM 136
           N ++ +P  L KL+ L  LDL +N       EA      L+ L+L+++ ++ +P  I K+
Sbjct: 550 NRITEIPEALAKLTNLTQLDLGTNYNISEIPEAITKLTNLTQLNLTSSQITEIPEVIAKL 609

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           T L +L LT N +                    + +PE      +  K   +T  T+L +
Sbjct: 610 TNLTQLNLTSNQI--------------------AEIPE------AIAK---LTNLTQLIL 640

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
           TS +       ++ IP  I +   +T+L+L+ N I ++P  ++   +L  LILS N+I +
Sbjct: 641 TSNQ-------ITEIPEAIAKLTNLTQLNLTSNQITKIPEAIAKLTNLTQLILSYNQITE 693

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
            P+AI   L++L+ L L +N + ++P D    +  L  LDLSYN I+ +P
Sbjct: 694 IPEAI-AKLTNLTQLILTSNQITEIP-DAITKLTNLTQLDLSYNRISEIP 741



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 132/286 (46%), Gaps = 47/286 (16%)

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LDLS   L+ LP EIGK+  L  L+L              G      + + SR+ E    
Sbjct: 21  LDLSGQELTELPGEIGKLQQLESLIL--------------GKKLEGYERVGSRILE---- 62

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                                   + G NL  +P E+     + KLD+S N ++ +P  +
Sbjct: 63  -----------------------KVSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVV 99

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +    L+ LIL R ++ + P+AI  +LS+L+ L  ++N + ++P +    +  L+ L +S
Sbjct: 100 TQILHLEELILIRVELTEIPEAI-ANLSNLTQLYFNSNHISKIP-ELIAKLSNLRELHVS 157

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N I  +PE    + L +L+EL++   Q+ E P  I  L  LR L +S N +  IPE   
Sbjct: 158 SNKITEIPE--AIAKLSNLRELHVSSNQITEIPEAIANLSNLRELHVSSNQITEIPEAIA 215

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            L +L EL +S N I+ +P  +  L  +L+ L L  N +  I   I
Sbjct: 216 KLINLRELQVSSNKITEIPEVIAKL-TNLRKLYLRNNQITEIPEVI 260



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 34/182 (18%)

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           +LDLS   + ELP E+     L++LIL + K++ +       + S    K+  N L+ +P
Sbjct: 20  ELDLSGQELTELPGEIGKLQQLESLILGK-KLEGYE-----RVGSRILEKVSGNNLKTLP 73

Query: 283 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
            +    +P L+ LD+S N + S+P+    + + HL+EL L R++L E             
Sbjct: 74  LE-LLGLPNLRKLDISGNPLESIPD--VVTQILHLEELILIRVELTE------------- 117

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
                     IPE   NL++LT+L  + N+IS +P  +  L  +L+ L +  N +  I  
Sbjct: 118 ----------IPEAIANLSNLTQLYFNSNHISKIPELIAKL-SNLRELHVSSNKITEIPE 166

Query: 402 TI 403
            I
Sbjct: 167 AI 168


>gi|324504718|gb|ADY42033.1| Leucine-rich repeat protein soc-2 [Ascaris suum]
          Length = 587

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 192/410 (46%), Gaps = 63/410 (15%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     LTEL   KN L  +P  IG+L  L +L L +N + S+P S+S    L    + +
Sbjct: 121 IRDLVQLTELFLYKNKLTALPHEIGNLVNLTKLGLSENGLTSLPDSLSALTQLETLDLRH 180

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  +P  + ++S L TL L  N++     E  +L RL ++DL  N +  LP  IG+++
Sbjct: 181 NKLCEIPPVIYQISSLETLWLRYNRIVSVGAEIGRLKRLKMIDLRENKIRELPATIGQIS 240

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +L   LL+ N LRT+                                 D I   T L+  
Sbjct: 241 SLLVCLLSYNHLRTI--------------------------------PDEIGQCTELT-- 266

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             +L L+  +L ++PS +     + +L +  N ++ LPP +S+C  L+  I+  N+++  
Sbjct: 267 --QLDLQHNDLVSLPSTMGNLSNLIRLGIRYNKLRYLPPGMSNCHKLEEFIVESNQLEAL 324

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP----------- 305
           PD +LTSL +L  + L  N L   P+ G +       +++ +N I+ +P           
Sbjct: 325 PDGMLTSLPNLKTINLSRNELTNFPAGGPQQFASAVTINMEHNSISKIPFGIFAKATGLT 384

Query: 306 -----ENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
                EN   +S+P        + EL L   QLR  P DI +L  L +L LS N L+ +P
Sbjct: 385 KLNLKEN-GLTSMPLDMGAWTAMTELNLSTNQLRVLPDDIDKLINLEVLVLSNNQLKKLP 443

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
                L  L ELDL +N + ++P E+G +  +L  L +  N L S+ RTI
Sbjct: 444 SQIGALKKLRELDLEENELDSVPSEIGFVT-TLTKLWIQSNKLVSLPRTI 492



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 114/280 (40%), Gaps = 60/280 (21%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E N ++ +   + A  T LT+L   +N L  MP  +G+ + +  L+L  N++  +P 
Sbjct: 362 INMEHNSISKIPFGIFAKATGLTKLNLKENGLTSMPLDMGAWTAMTELNLSTNQLRVLPD 421

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I    +L    + NN L  LP+++G L KL  LDL  N+                    
Sbjct: 422 DIDKLINLEVLVLSNNQLKKLPSQIGALKKLRELDLEENE-------------------- 461

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
             L  +P EIG +TTL KL +  N L +L  ++ N     L      R  EN        
Sbjct: 462 --LDSVPSEIGFVTTLTKLWIQSNKLVSLPRTIGN-----LTNLTDLRAGEN-------- 506

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCA 242
                                  NL+++P EI     +  L ++ N S+  LP EL+ CA
Sbjct: 507 -----------------------NLTSLPEEIGNLDSLKSLYINDNSSLHNLPFELALCA 543

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLD-NNPLRQV 281
           SL+ + +    +   P  I     SL    L    P R V
Sbjct: 544 SLEIMSIENCPLSQIPPEITAGGPSLVIQYLKMQGPYRGV 583



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
           PT I  L QL  L L +N L ++P    NL +LT+L LS+N +++LP  L  L   L+ L
Sbjct: 118 PTSIRDLVQLTELFLYKNKLTALPHEIGNLVNLTKLGLSENGLTSLPDSLSALT-QLETL 176

Query: 390 RLDGNPLRSI 399
            L  N L  I
Sbjct: 177 DLRHNKLCEI 186


>gi|158286480|ref|XP_308777.4| AGAP006993-PA [Anopheles gambiae str. PEST]
 gi|157020488|gb|EAA04662.4| AGAP006993-PA [Anopheles gambiae str. PEST]
          Length = 626

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 220/437 (50%), Gaps = 35/437 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N LT L N+ I +   L +L  +KN L  +P  +G L RL    +  N I  
Sbjct: 209 LQQLTLSNNHLTELPND-IVNLRKLQKLDLAKNDLKKLPPVMGELRRLECFYVQHNDIDE 267

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQL-RLSV 118
           +P   +GC +L E ++ NN +  LP +  + L +L  LDL  N++++   E   L  L+ 
Sbjct: 268 LPD-FTGCEALKELHISNNYIKTLPGDFCENLPQLKVLDLRDNKIEKLPDEIALLASLTR 326

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR----LPE 174
           LDLSNN++S LP  +  +  L  L + GNP+R++R  ++   T  +LK LR R     P+
Sbjct: 327 LDLSNNTISSLPSCLSTLAHLVSLQVEGNPIRSIRRDIIQCGTQRILKTLRERDGTGKPD 386

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
                 +       T   + S+ ++         S  P ++++  +   L +   ++ ++
Sbjct: 387 GGQKGVARAAASASTAVVKNSLFTE---------STFP-DVYQMRKGRALIVCSKALVDI 436

Query: 235 PP-----ELSSCASLQTLILSRNKIKDWPDAILTSLSS-LSCLKLDNNPLRQVPSDGFKD 288
           P       L +C  +  + +S+NK+   P  I T LSS L+ L +  N L+ VP+  F  
Sbjct: 437 PEAVFLDALEAC--VYNVDISKNKLTAVPSGI-THLSSLLTELNVSFNLLQTVPA-FFSQ 492

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
              +  L+LS N +  LPE      L  L+EL +   QL+  P  +  L+ L IL  S N
Sbjct: 493 FDKISYLNLSNNQMTDLPE--VVGLLVTLRELNVISNQLKRIPDCVYELRGLEILLASGN 550

Query: 348 SLQSI---PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
            ++ I     G   L  L  LDL++NNI  +PP LG L+ ++  L L GN  R  R  IL
Sbjct: 551 QIEEIDATESGLGALKRLATLDLANNNIKHVPPVLGTLK-NITTLELIGNSFRQPRHQIL 609

Query: 405 DRGTKAVLKYLKDKIPE 421
           ++GT++++ YL+D+IP+
Sbjct: 610 EKGTESIMSYLRDRIPQ 626



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 164/329 (49%), Gaps = 47/329 (14%)

Query: 94  LGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
           L +LDL SN L     E  Q  + L+VL+L +N+L+ LP  IG +T L K  +  N L  
Sbjct: 94  LTSLDLSSNTLTTIS-ENIQNLVDLTVLNLQDNALTSLPAGIGALTKLTKFSVARNKLTE 152

Query: 152 LRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
           L  S         LK L+   L  NE +E +    DLI + T        L +   +++A
Sbjct: 153 LPESFFQ------LKELKHLNLSHNEFAEMNPNISDLIMLET--------LDVSFNSINA 198

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +P  +     + +L LS N + ELP ++ +   LQ L L++N +K  P  ++  L  L C
Sbjct: 199 LPGGVGFLVRLQQLTLSNNHLTELPNDIVNLRKLQKLDLAKNDLKKLP-PVMGELRRLEC 257

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 330
             + +N + ++P                           F+    L+EL++    ++  P
Sbjct: 258 FYVQHNDIDELPD--------------------------FTGCEALKELHISNNYIKTLP 291

Query: 331 TDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
            D    L QL++LDL  N ++ +P+    L SLT LDLS+N IS+LP  L  L   L +L
Sbjct: 292 GDFCENLPQLKVLDLRDNKIEKLPDEIALLASLTRLDLSNNTISSLPSCLSTL-AHLVSL 350

Query: 390 RLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           +++GNP+RSIRR I+  GT+ +LK L+++
Sbjct: 351 QVEGNPIRSIRRDIIQCGTQRILKTLRER 379



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 135/289 (46%), Gaps = 24/289 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N LT +S N I +   LT L    N L  +P  IG+L++L +  + +N++  
Sbjct: 94  LTSLDLSSNTLTTISEN-IQNLVDLTVLNLQDNALTSLPAGIGALTKLTKFSVARNKLTE 152

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S      L    + +N  + +   +  L  L TLD+  N +         L RL  L
Sbjct: 153 LPESFFQLKELKHLNLSHNEFAEMNPNISDLIMLETLDVSFNSINALPGGVGFLVRLQQL 212

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LSNN L+ LP +I  +  L+KL L  N L+ L       P    L+ L     ++ D +
Sbjct: 213 TLSNNHLTELPNDIVNLRKLQKLDLAKNDLKKL------PPVMGELRRLECFYVQHNDID 266

Query: 180 A---STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELP 235
                T  E L           KEL +    +  +P +  E   ++  LDL  N I++LP
Sbjct: 267 ELPDFTGCEAL-----------KELHISNNYIKTLPGDFCENLPQLKVLDLRDNKIEKLP 315

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
            E++  ASL  L LS N I   P + L++L+ L  L+++ NP+R +  D
Sbjct: 316 DEIALLASLTRLDLSNNTISSLP-SCLSTLAHLVSLQVEGNPIRSIRRD 363


>gi|421119264|ref|ZP_15579588.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347894|gb|EKO98745.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 526

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 131/415 (31%), Positives = 197/415 (47%), Gaps = 26/415 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+L      +I     L  L  S+N L  +P  IG L  L  L L++N++ +
Sbjct: 96  LQELDLRDNQLATFPA-VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTT 154

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
            P  I    +L + ++  N L+ALP E+G+L  L TLDL  NQ      E  QL+ L  L
Sbjct: 155 FPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTL 214

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L NN L+  P EIG++  L+ L L  NPL       +    P     LR  + EN    
Sbjct: 215 NLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLRE-VAENGVYR 273

Query: 180 ASTTKEDLITMATRLSVTSKELS------------LEGMNL-----SAIPSEIWEAGEIT 222
                ++       LS+  K+ S            L G+NL     S +P EI     + 
Sbjct: 274 NLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLK 333

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
            L L  N ++ +P E+    +L+ L L  N+++  P  I   L +L  L L  N L+  P
Sbjct: 334 YLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEI-GQLRNLQKLSLHQNTLKIFP 392

Query: 283 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           ++  + +  LQ LDLS N   + P+      L +LQ L L+R QL     +I +L+ L+ 
Sbjct: 393 AE-IEQLKKLQKLDLSVNQFTTFPK--EIGKLENLQTLNLQRNQLTNLTAEIEQLKNLQE 449

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           LDL+ N    +P+    L  L  LDL +N ++ LP E+G L+ +LQ L L  N L
Sbjct: 450 LDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ-NLQWLYLQNNQL 503



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 195/439 (44%), Gaps = 51/439 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G KLT L    I     L EL    NLL  +P+ IG L  L  LDL  N++ + P+
Sbjct: 53  LNLSGEKLTALPKE-IGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPA 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L    +  N L  LP E+G+L  L  L L+ N+L  +  E  QL+ L  L LS
Sbjct: 112 VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS-----------SLVNGPTPALLKYL--- 168
            N L+ LP EIG++  L+ L L  N   TL             +LVN       K +   
Sbjct: 172 ENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLVNNRLTVFPKEIGQL 231

Query: 169 -----------------RSRLPE---------NEDSEASTTKEDLITMATRLSVTSKELS 202
                            R R+ +          E +E    +   + +A    +   ELS
Sbjct: 232 QNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRN--LNLAQEEPLKVFELS 289

Query: 203 LEGMNLS-AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
           LE  + S + P  I +   +  L+L       LP E+S   +L+ L L  N +K+ P  I
Sbjct: 290 LEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEI 349

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 320
              L +L  L L+ N L ++P +    +  LQ L L  N +   P       L  LQ+L 
Sbjct: 350 -GQLKNLEALNLEANELERLPKE-IGQLRNLQKLSLHQNTLKIFP--AEIEQLKKLQKLD 405

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L   Q    P +I +L+ L+ L+L +N L ++    + L +L ELDL+DN  + LP E+G
Sbjct: 406 LSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIEQLKNLQELDLNDNQFTVLPKEIG 465

Query: 381 LLEPSLQALRLDGNPLRSI 399
            L+  LQ L L  N L ++
Sbjct: 466 KLK-KLQTLDLRNNQLTTL 483



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 118/222 (53%), Gaps = 8/222 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+ E  T ++  +T A +  +  + L+L G  L+A+P EI +   + +L+L  N +  LP
Sbjct: 30  EEVEPGTYRD--LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L L  N++  +P A++  L  L  L L  N L  +P++    +  LQ L
Sbjct: 88  KEIGQLENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IGRLQNLQDL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L  N + + P+      L +LQ+L+L   +L   P +I +L+ L+ LDL  N   ++P+
Sbjct: 146 GLYKNKLTTFPK--EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
               L +L  L+L +N ++  P E+G L+ +LQ L L  NPL
Sbjct: 204 EIGQLQNLQTLNLVNNRLTVFPKEIGQLQ-NLQDLELLMNPL 244



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 97/234 (41%), Gaps = 37/234 (15%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ I  L  L  L L  N + +IPS I    +L    +  N L  LP E+G+L  L  L
Sbjct: 322 LPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKL 381

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            LH N LK +  E  QL+ L  LDLS N  +  P EIGK+  L+ L L  N L  L + +
Sbjct: 382 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEI 441

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                                       E L  +        +EL L     + +P EI 
Sbjct: 442 ----------------------------EQLKNL--------QELDLNDNQFTVLPKEIG 465

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +  ++  LDL  N +  LP E+    +LQ L L  N++       +  L  L C
Sbjct: 466 KLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRKLLPLKC 519



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 147/344 (42%), Gaps = 62/344 (18%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN--------------G 159
           L + VL+LS   L+ LP EIG++  L++L L  N L  L   +                 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLA 107

Query: 160 PTPALLKYLRS----RLPENE----DSEASTTK--EDLITMATRLSVTSKELS------- 202
             PA++  L+      L EN      +E    +  +DL     +L+   KE+        
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 203 --LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
             L    L+A+P EI +   +  LDL  N    LP E+    +LQTL L  N++  +P  
Sbjct: 168 LWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLVNNRLTVFPKE 227

Query: 261 ILTSLSSLSCLKLDNNP-------------------LRQVPSDG-FKDIPM-----LQIL 295
           I   L +L  L+L  NP                   LR+V  +G ++++ +     L++ 
Sbjct: 228 I-GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVF 286

Query: 296 DLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           +LS       ++ P       +L+ L L        P +I RL+ L+ L L  N L++IP
Sbjct: 287 ELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIP 346

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
                L +L  L+L  N +  LP E+G L  +LQ L L  N L+
Sbjct: 347 SEIGQLKNLEALNLEANELERLPKEIGQLR-NLQKLSLHQNTLK 389



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 7/144 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N L +     I     L +L  S N     P+ IG L  L  L+L +N++ +
Sbjct: 378 LQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTN 436

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           + + I    +L E  + +N  + LP E+GKL KL TLDL +NQL     E  QL+ L  L
Sbjct: 437 LTAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 496

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL 143
            L NN LS     + +   +RKLL
Sbjct: 497 YLQNNQLS-----LKEQERIRKLL 515


>gi|348686390|gb|EGZ26205.1| hypothetical protein PHYSODRAFT_312299 [Phytophthora sojae]
          Length = 759

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 142/485 (29%), Positives = 223/485 (45%), Gaps = 69/485 (14%)

Query: 1   MSKLDVEGNKLTVLSNN---------LIASWTMLTELIAS-------------KNLLNGM 38
           +  L V+ N LT L  +         L+A    LT L AS             KN L   
Sbjct: 164 LETLHVDDNSLTALPESIGRLHKLHVLMAHTNQLTRLPASFGALQNMQNLDLKKNRLEST 223

Query: 39  PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE--LGKLSKLGT 96
            + +  LSRL  LDL QN+++  P    G  +L + ++G N LSA+     L     +  
Sbjct: 224 SDALAGLSRLKFLDLRQNKLIVFPELPEGA-TLDQVFLGYNILSAIDETSILRIKDSVTV 282

Query: 97  LDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
           LD+  N+        AC   L  LD++NN LS LPP +G +  L   ++ GNPLR +R S
Sbjct: 283 LDMRDNKFAALPANIACLYLLKTLDVANNDLSDLPPGLGYLKHLNHFIVDGNPLRAIRRS 342

Query: 156 LVNGPTPALLKYLRSRLP--------ENEDSEASTTKEDL-----------------ITM 190
           +++    +L KYLR+R P        E E  E    +E L                  T 
Sbjct: 343 VISSGCESLKKYLRTRGPPPVGVDVLEEERDELQLERERLAQVDNNKTEELPPPAVEYTA 402

Query: 191 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT------KLDLSRNSIQELPPELSSCASL 244
             R +  S  +     +L+ +P ++   G+         L+LS N +Q LP  +     L
Sbjct: 403 QFREAAASGTMIFTNSSLAVLPPDLVGQGQFNFGSTLIHLNLSSNQLQALPASVGELVML 462

Query: 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPM----LQILDL-S 298
           +TL +  N+++    +I  +L  L  L+L  N L       F  D P     L+ +DL S
Sbjct: 463 KTLTVEDNQLQSLHPSI-AALPHLELLRLRKNQLLAESISYFLGDSPALGNTLKEMDLRS 521

Query: 299 YNIASLP-ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N+++LP E     SL  L   Y R   L   P    +L ++ ++ +S N L+S+   + 
Sbjct: 522 NNLSALPAEISQLRSLETLLLAYNRIETLDRFPWS--QLAKVSVISVSDNKLRSLGRIY- 578

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           +   L  L   +NN++ +P ELGL  P L+A+ ++GNP R++R  ++ +G+  +L YLK+
Sbjct: 579 DAPLLASLSFENNNLAKVPCELGLC-PHLRAIYMNGNPQRTVRGAVIAKGSAEILVYLKN 637

Query: 418 KIPEN 422
           K+P N
Sbjct: 638 KLPPN 642



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 164/377 (43%), Gaps = 91/377 (24%)

Query: 48  LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 107
           L+++DL  N I SI   I+G  S+    +  NAL  LP    +L  L  LDL  NQL++ 
Sbjct: 71  LVKIDLSHNAIPSISDEIAGLTSVTSIKLTQNALQVLPEGFFELQALTYLDLSHNQLEQ- 129

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 167
                       DLS +         G +  L++L+L+GN L                  
Sbjct: 130 ------------DLSES--------FGALVGLKELVLSGNKL------------------ 151

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
             SRLP            D I +   L      L ++  +L+A+P  I    ++  L   
Sbjct: 152 --SRLP------------DSIALLENLET----LHVDDNSLTALPESIGRLHKLHVLMAH 193

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            N +  LP    +  ++Q L L +N+++   DA L  LS L  L L  N L   P     
Sbjct: 194 TNQLTRLPASFGALQNMQNLDLKKNRLESTSDA-LAGLSRLKFLDLRQNKLIVFP----- 247

Query: 288 DIPMLQILD---LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ-LRILD 343
           ++P    LD   L YNI S  +                        T ILR++  + +LD
Sbjct: 248 ELPEGATLDQVFLGYNILSAIDE-----------------------TSILRIKDSVTVLD 284

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           +  N   ++P     L  L  LD+++N++S LPP LG L+  L    +DGNPLR+IRR++
Sbjct: 285 MRDNKFAALPANIACLYLLKTLDVANNDLSDLPPGLGYLK-HLNHFIVDGNPLRAIRRSV 343

Query: 404 LDRGTKAVLKYLKDKIP 420
           +  G +++ KYL+ + P
Sbjct: 344 ISSGCESLKKYLRTRGP 360



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 163/421 (38%), Gaps = 67/421 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N+L    +    +   L EL+ S N L+ +P++I  L  L  L +  N + +
Sbjct: 117 LTYLDLSHNQLEQDLSESFGALVGLKELVLSGNKLSRLPDSIALLENLETLHVDDNSLTA 176

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P SI     L       N L+ LPA  G L  +  LDL  N+L+        L RL  L
Sbjct: 177 LPESIGRLHKLHVLMAHTNQLTRLPASFGALQNMQNLDLKKNRLESTSDALAGLSRLKFL 236

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL  N L    PE+ +  TL ++ L  N L  +                        D  
Sbjct: 237 DLRQNKLIVF-PELPEGATLDQVFLGYNILSAI------------------------DET 271

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +    +D +T+          L +     +A+P+ I     +  LD++ N + +LPP L 
Sbjct: 272 SILRIKDSVTV----------LDMRDNKFAALPANIACLYLLKTLDVANNDLSDLPPGLG 321

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               L   I+  N ++    AI  S+ S  C  L      + P     D+   +  +L  
Sbjct: 322 YLKHLNHFIVDGNPLR----AIRRSVISSGCESLKKYLRTRGPPPVGVDVLEEERDELQL 377

Query: 300 NIASLPE--NPPFSSLPHLQELYLRRMQLREA----------------PTDILRLQQLRI 341
               L +  N     LP     Y    Q REA                P D++   Q   
Sbjct: 378 ERERLAQVDNNKTEELPPPAVEYT--AQFREAAASGTMIFTNSSLAVLPPDLVGQGQFNF 435

Query: 342 ------LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
                 L+LS N LQ++P     L  L  L + DN + +L P +  L P L+ LRL  N 
Sbjct: 436 GSTLIHLNLSSNQLQALPASVGELVMLKTLTVEDNQLQSLHPSIAAL-PHLELLRLRKNQ 494

Query: 396 L 396
           L
Sbjct: 495 L 495



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 13/213 (6%)

Query: 186 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 245
           D    A R +  +  LSL   NL+  P++++   E  + D  +            C  L 
Sbjct: 23  DQTARALREARRTGVLSLPARNLTEFPAKVYHLEEHLEKDEKK----------WECVDLV 72

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 305
            + LS N I    D I   L+S++ +KL  N L+ +P +GF ++  L  LDLS+N     
Sbjct: 73  KIDLSHNAIPSISDEI-AGLTSVTSIKLTQNALQVLP-EGFFELQALTYLDLSHNQLEQD 130

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
            +  F +L  L+EL L   +L   P  I  L+ L  L +  NSL ++PE    L  L  L
Sbjct: 131 LSESFGALVGLKELVLSGNKLSRLPDSIALLENLETLHVDDNSLTALPESIGRLHKLHVL 190

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
               N ++ LP   G L+ ++Q L L  N L S
Sbjct: 191 MAHTNQLTRLPASFGALQ-NMQNLDLKKNRLES 222


>gi|432853398|ref|XP_004067687.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Oryzias
           latipes]
          Length = 595

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 145/474 (30%), Positives = 215/474 (45%), Gaps = 105/474 (22%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L  L   +NLL  +PE  G L  L  LDL +NR+  +P S+     L +  + +N LS L
Sbjct: 148 LRSLTLQQNLLENLPEEFGQLENLTELDLSKNRLTDLPQSLGRLTGLQKISLSHNKLSCL 207

Query: 85  PAELGKLSKLGTLD----------------------------------LHSNQLKEYCV- 109
           P  L +L+ +  LD                                  LH+  LKE  V 
Sbjct: 208 PDCLSQLTNVKLLDCSNNQLSDVPASLAHMLSLEQLHLRHNRLQRLPQLHAPALKELYVG 267

Query: 110 -------EACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT------------- 145
                  EA QL     +SVL+L +N +  +P ++  + TL +L LT             
Sbjct: 268 NNQVGVLEAEQLECLKAISVLELRDNKIRAVPEQMSLLHTLTRLDLTNNDIGSLPASLSL 327

Query: 146 ----------GNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEASTTKEDLITMATRL 194
                     GNPLR +R  L+   T  LLKYLR R+ E  E SE   T     + A R+
Sbjct: 328 LPNLKVLLVEGNPLRGIRRDLLTKGTNELLKYLRGRVKEEPESSEDPPTAMTFPSQA-RI 386

Query: 195 SVTSKE----LSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPE-LSSCASLQT 246
           +V S +    L    M + +IP E + A E   +   + S+N +  +P   L   +SL  
Sbjct: 387 NVHSIKTLGVLDQSDMQVDSIPDEAFLAAEGQNVVTANFSKNKLTSIPARLLQLSSSLTE 446

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 306
           L L  N++ D     +  L  L+ L L NN L+ +P+D  +++  L+ + LSYN      
Sbjct: 447 LNLGFNQL-DHCGVEVCRLLQLTHLDLRNNQLKDLPAD-MENLAKLRCIILSYN------ 498

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
              F S P +  LY    Q+    T ++   Q+  +D         P     L  L+ LD
Sbjct: 499 --RFKSFPEV--LY----QMFSMETVLMANNQVSSVD---------PARLARLEHLSTLD 541

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           LS+N++ ++PPELGL   SL++L L GNP R+ R  I+ +GT AVL+YL+ +IP
Sbjct: 542 LSNNDLLSIPPELGLC-TSLRSLSLQGNPFRTPRAAIVAKGTDAVLEYLRSRIP 594



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 170/354 (48%), Gaps = 69/354 (19%)

Query: 71  LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 129
           L +  + +N +S +  ++  L  L TLDLH NQL        +L+ L  L LS+N LS L
Sbjct: 79  LTKLLLSSNQISQISEDIRLLPALVTLDLHDNQLNTLHSAIGELQELQTLRLSHNQLSSL 138

Query: 130 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 189
           P E+                              +L+ LRS                   
Sbjct: 139 PVEV-----------------------------CMLRNLRS------------------- 150

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
                      L+L+   L  +P E  +   +T+LDLS+N + +LP  L     LQ + L
Sbjct: 151 -----------LTLQQNLLENLPEEFGQLENLTELDLSKNRLTDLPQSLGRLTGLQKISL 199

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 308
           S NK+   PD  L+ L+++  L   NN L  VP+     +  L+ L L +N +  LP+  
Sbjct: 200 SHNKLSCLPDC-LSQLTNVKLLDCSNNQLSDVPA-SLAHMLSLEQLHLRHNRLQRLPQ-- 255

Query: 309 PFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                P L+ELY+   Q+     + L  L+ + +L+L  N ++++PE    L +LT LDL
Sbjct: 256 --LHAPALKELYVGNNQVGVLEAEQLECLKAISVLELRDNKIRAVPEQMSLLHTLTRLDL 313

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
           ++N+I +LP  L LL P+L+ L ++GNPLR IRR +L +GT  +LKYL+ ++ E
Sbjct: 314 TNNDIGSLPASLSLL-PNLKVLLVEGNPLRGIRRDLLTKGTNELLKYLRGRVKE 366



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 182/394 (46%), Gaps = 32/394 (8%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+L+ S N ++ + E I  L  L+ LDLH N++ ++ S+I     L    + +N
Sbjct: 74  WEQTDLTKLLLSSNQISQISEDIRLLPALVTLDLHDNQLNTLHSAIGELQELQTLRLSHN 133

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
            LS+LP E+  L  L +L L  N L+    E  QL  L+ LDLS N L+ LP  +G++T 
Sbjct: 134 QLSSLPVEVCMLRNLRSLTLQQNLLENLPEEFGQLENLTELDLSKNRLTDLPQSLGRLTG 193

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRL--- 194
           L+K+ L+ N L  L   L       LL    ++L +   S A   + E L     RL   
Sbjct: 194 LQKISLSHNKLSCLPDCLSQLTNVKLLDCSNNQLSDVPASLAHMLSLEQLHLRHNRLQRL 253

Query: 195 ----SVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPELSSCASLQTLIL 249
               +   KEL +    +  + +E  E    I+ L+L  N I+ +P ++S   +L  L L
Sbjct: 254 PQLHAPALKELYVGNNQVGVLEAEQLECLKAISVLELRDNKIRAVPEQMSLLHTLTRLDL 313

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD----GFKDIPMLQILDLSYNIASLP 305
           + N I   P A L+ L +L  L ++ NPLR +  D    G  ++       L Y    + 
Sbjct: 314 TNNDIGSLP-ASLSLLPNLKVLLVEGNPLRGIRRDLLTKGTNEL-------LKYLRGRVK 365

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP-EGF--KNLTSL 362
           E P  S  P     +       +A  ++  ++ L +LD S   + SIP E F      ++
Sbjct: 366 EEPESSEDPPTAMTF-----PSQARINVHSIKTLGVLDQSDMQVDSIPDEAFLAAEGQNV 420

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
              + S N ++++P  L  L  SL  L L  N L
Sbjct: 421 VTANFSKNKLTSIPARLLQLSSSLTELNLGFNQL 454



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 6/169 (3%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           NKLT +   L+   + LTEL    N L+     +  L +L  LDL  N++  +P+ +   
Sbjct: 428 NKLTSIPARLLQLSSSLTELNLGFNQLDHCGVEVCRLLQLTHLDLRNNQLKDLPADMENL 487

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNN 124
             L    +  N   + P  L ++  + T+ + +NQ+    V+  +L     LS LDLSNN
Sbjct: 488 AKLRCIILSYNRFKSFPEVLYQMFSMETVLMANNQVSS--VDPARLARLEHLSTLDLSNN 545

Query: 125 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            L  +PPE+G  T+LR L L GNP RT R+++V   T A+L+YLRSR+P
Sbjct: 546 DLLSIPPELGLCTSLRSLSLQGNPFRTPRAAIVAKGTDAVLEYLRSRIP 594


>gi|418669438|ref|ZP_13230822.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410754822|gb|EKR16467.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 633

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 139/402 (34%), Positives = 198/402 (49%), Gaps = 21/402 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ G   T L    I     L EL    N L   P  I  L +L  LDL +NR++ +P+
Sbjct: 55  LDLSGQNFTTLPKK-IEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPN 113

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  +  N L   P E+G+L  L TL+L  NQL    VE  QL+ L  L+L 
Sbjct: 114 EIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLR 173

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++  L+ L L  N L TL   +        L+ L++ L  +E+   + 
Sbjct: 174 KNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEI------GQLQNLQT-LGLSENQLTTF 226

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
            KE  I     L    +EL+L+   L+A+P EI +   +  L+LS N +   P E+    
Sbjct: 227 PKE--IGQLENL----QELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLK 280

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
            LQ L L RN++  +P  I   L +L  L L  N  + V S     +  L  L+LSYN +
Sbjct: 281 KLQDLGLGRNQLTTFPKEI-GQLKNLQMLDLCYNQFKTV-SKEIGQLKNLLQLNLSYNQL 338

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
           A+LP       L  LQ+L L R QL   P +I +L+ L  LDL  N L ++P+    L +
Sbjct: 339 ATLP--AEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKN 396

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L  L L  N ++  P E+G LE +LQ L L  N L ++ + I
Sbjct: 397 LYNLGLGRNQLATFPKEIGQLE-NLQELDLWNNRLTALPKEI 437



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 190/400 (47%), Gaps = 25/400 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L N  I     L EL   KN L   P+ IG L  L  L+L  N++ +
Sbjct: 98  LESLDLSENRLVMLPNE-IGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLAT 156

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L +  +  N L+ LP E+G+L  L TL+L  NQL    VE  QL+ L  L
Sbjct: 157 LPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTL 216

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LS N L+  P EIG++  L++L L  N L  L   +              +L   E+ E
Sbjct: 217 GLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEI-------------GQLKNLENLE 263

Query: 180 ASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
            S  +  L T    +    K  +L L    L+  P EI +   +  LDL  N  + +  E
Sbjct: 264 LSENQ--LTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKE 321

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           +    +L  L LS N++   P A +  L  L  L L  N L  +P +    +  L  LDL
Sbjct: 322 IGQLKNLLQLNLSYNQLATLP-AEIGQLKKLQDLSLGRNQLTTLPKE-IGQLKNLYNLDL 379

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
             N + +LP+      L +L  L L R QL   P +I +L+ L+ LDL  N L ++P+  
Sbjct: 380 GTNQLTTLPK--EIGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKEI 437

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
             L +L  L+LS+N ++  P E+G L+  LQ L L  N L
Sbjct: 438 GQLKNLENLELSENQLTTFPKEIGQLK-KLQDLGLSYNRL 476



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 174/404 (43%), Gaps = 41/404 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  N+LT      I     L EL    N L  +P+ IG L  L  L+L +N++ +
Sbjct: 213 LQTLGLSENQLTTFPKE-IGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTT 271

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC------------ 108
            P  I     L +  +G N L+  P E+G+L  L  LDL  NQ K               
Sbjct: 272 FPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQL 331

Query: 109 -----------VEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
                       E  QL+ L  L L  N L+ LP EIG++  L  L L  N L TL   +
Sbjct: 332 NLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEI 391

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                   L   R++L       A+  KE  I     L    +EL L    L+A+P EI 
Sbjct: 392 GQLKNLYNLGLGRNQL-------ATFPKE--IGQLENL----QELDLWNNRLTALPKEIG 438

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           +   +  L+LS N +   P E+     LQ L LS N++   P  I   L  L  L L  N
Sbjct: 439 QLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEI-GQLEKLQDLGLSYN 497

Query: 277 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
            L  +P +    +  LQ+LDL YN      +     L +L +L L   QL   P +I +L
Sbjct: 498 RLVILPKE-IGQLKNLQMLDLCYNQFK-TVSKEIGQLKNLLQLNLSYNQLATLPAEIGQL 555

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           + L  LDL  N L ++P+    L +L  L L  N ++ LP E+G
Sbjct: 556 KNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 599



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 121/237 (51%), Gaps = 11/237 (4%)

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
           +++  PE+E      T  DL T A +  +  + L L G N + +P +I +   + +LDL 
Sbjct: 27  IQAEAPEDEPG----TYRDL-TEALQNPLNVRVLDLSGQNFTTLPKKIEQLKNLQELDLR 81

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            N +   P  +     L++L LS N++   P+ I   L +L  L L  N L   P +   
Sbjct: 82  DNQLATFPAVIVELQKLESLDLSENRLVMLPNEI-GRLQNLQELGLYKNKLITFPKE-IG 139

Query: 288 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
            +  LQ L+L  N +A+LP       L +L++L LR+ +L   P +I +LQ L+ L+L  
Sbjct: 140 QLRNLQTLNLQDNQLATLP--VEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQD 197

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           N L ++P     L +L  L LS+N ++  P E+G LE +LQ L L  N L ++ + I
Sbjct: 198 NQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLE-NLQELNLKWNRLTALPKEI 253



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 2/150 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  N+L +L    I     L +L  S N L  +P+ IG L  L  LDL  N+  +
Sbjct: 466 LQDLGLSYNRLVILPKE-IGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKT 524

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +   I    +L +  +  N L+ LPAE+G+L  L  LDL +NQL     E  QL+ L  L
Sbjct: 525 VSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNL 584

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
            L  N L+ LP EIG++  L+ LLL+ NP+
Sbjct: 585 GLGTNQLTTLPKEIGQLKKLQWLLLSVNPI 614


>gi|456822986|gb|EMF71456.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 423

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 126/373 (33%), Positives = 183/373 (49%), Gaps = 20/373 (5%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           LI S+  L  +P+ I  L  L  LDL  N++ ++P  I    +L    +  N L+ALP E
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 146
           +G+L  L  L L++NQL     E  QL+ L +LDL NN L+ LP EIG++  L++L L+ 
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSY 170

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
           N L TL   +       LL    S+L         T     I     L     EL L   
Sbjct: 171 NQLTTLPKEIGKLENLQLLSLYESQL---------TILPQEIGKLQNLH----ELDLSHN 217

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            L+ +P EI +   + +  L  N +  LP E+    +L  L L  N++   P  I   L 
Sbjct: 218 QLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEI-GQLQ 276

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
           +L    LDNN    +P +    +  LQ L LSYN + + P+      L  LQ L L   Q
Sbjct: 277 NLQRFVLDNNQFTILPKE-IGQLQNLQELYLSYNQLTTFPK--EIGKLQKLQTLNLWNNQ 333

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L   P +I +L+ L+ L+LS+N L++IP+    L +L  LDLS+N ++ LP E+  L+ +
Sbjct: 334 LTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEIEQLK-N 392

Query: 386 LQALRLDGNPLRS 398
           LQ L L  N   S
Sbjct: 393 LQTLNLWNNQFSS 405



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 157/371 (42%), Gaps = 64/371 (17%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N+LT L    I     L  L  + N L  +P  I  L  L  LDL  N++  +P  I   
Sbjct: 102 NQLTALPKE-IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQL 160

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 127
            +L E Y+  N L+ LP E+GKL  L  L L+ +QL     E  +L+ L  LDLS+N L+
Sbjct: 161 QNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLT 220

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            LP EIG++  L++ +L  N L  L   +  G    L                       
Sbjct: 221 ILPKEIGQLQNLQRFVLDNNQLTILPKEI--GKLQNL----------------------- 255

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
                       EL L    L+ +P EI +   + +  L  N    LP E+    +LQ L
Sbjct: 256 -----------HELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQEL 304

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 307
            LS N++  +P  I   L  L  L L NN L  +P +                       
Sbjct: 305 YLSYNQLTTFPKEI-GKLQKLQTLNLWNNQLTTLPEE----------------------- 340

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                L +L+ L L   QL+  P +I +LQ L+ LDLS N L ++P+  + L +L  L+L
Sbjct: 341 --IEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEIEQLKNLQTLNL 398

Query: 368 SDNNISALPPE 378
            +N  S+   E
Sbjct: 399 WNNQFSSQEKE 409



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 80/228 (35%), Positives = 122/228 (53%), Gaps = 7/228 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E   T +DL T A +  +  + L L    L+ +P EI +   +  LDL  N +  LP 
Sbjct: 28  QAEEPGTYQDL-TKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPK 86

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    +LQ LIL  N++   P  I   L +L  L L+NN L  +P++  + +  LQ+LD
Sbjct: 87  EIGQLKNLQLLILYYNQLTALPKEI-GQLKNLKVLFLNNNQLTTLPTE-IRQLKNLQMLD 144

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N +  LP+      L +LQELYL   QL   P +I +L+ L++L L ++ L  +P+ 
Sbjct: 145 LGNNQLTILPK--EIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQE 202

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L +L ELDLS N ++ LP E+G L+ +LQ   LD N L  + + I
Sbjct: 203 IGKLQNLHELDLSHNQLTILPKEIGQLQ-NLQRFVLDNNQLTILPKEI 249



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 141/314 (44%), Gaps = 40/314 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT+L    I     L EL  S N L  +P+ IG L  L  L L+++++  
Sbjct: 140 LQMLDLGNNQLTILPKE-IGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTI 198

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  + +N L+ LP E+G+L  L    L +NQL     E  +L+ L  L
Sbjct: 199 LPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHEL 258

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +N L+ LP EIG++  L++ +L  N    L         P  +  L++         
Sbjct: 259 YLGHNQLTILPKEIGQLQNLQRFVLDNNQFTIL---------PKEIGQLQNL-------- 301

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              +EL L    L+  P EI +  ++  L+L  N +  LP E+ 
Sbjct: 302 -------------------QELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIE 342

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+TL LS N++K  P  I   L +L  L L NN L  +P +  + +  LQ L+L  
Sbjct: 343 QLKNLKTLNLSENQLKTIPQEI-GQLQNLKSLDLSNNQLTTLPKE-IEQLKNLQTLNLWN 400

Query: 300 NIASLPENPPFSSL 313
           N  S  E      L
Sbjct: 401 NQFSSQEKEKIRKL 414



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 7/144 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +  ++ N+ T+L    I     L EL  S N L   P+ IG L +L  L+L  N++ +
Sbjct: 278 LQRFVLDNNQFTILPKE-IGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTT 336

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    +  N L  +P E+G+L  L +LDL +NQL     E  QL+ L  L
Sbjct: 337 LPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEIEQLKNLQTL 396

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL 143
           +L NN  S    E      +RKLL
Sbjct: 397 NLWNNQFSSQEKE-----KIRKLL 415


>gi|456823284|gb|EMF71754.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 455

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 135/421 (32%), Positives = 201/421 (47%), Gaps = 44/421 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++   KLT L    I     L EL  S N L  +P+ +G L  L RLDLHQNR+ +
Sbjct: 73  LQRLNLNSQKLTTLPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLAT 131

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  + +N L+ LP E+ +L  L  LDLH NQL     E  QL+ L  L
Sbjct: 132 LPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTL 191

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +     L+ LP EIG++  L+ L L  N L TL                   + E ++ E
Sbjct: 192 NSIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKE----------------IGELQNLE 235

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
               +E+ IT                    A+P EI +   +  LDL +N +  LP E+ 
Sbjct: 236 ILVLRENRIT--------------------ALPKEIGQLQNLQWLDLHQNQLTTLPKEIG 275

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +LQ L L +N++   P  I   L +L  L LD N L  +P +  + +  L++LDL  
Sbjct: 276 QLQNLQRLDLHQNQLTTLPKEI-GQLQNLQELCLDENQLTTLPKE-IEQLQNLRVLDLDN 333

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N + +LP+      L  LQ L L   +L   P +I +LQ L++L L  N L ++P+    
Sbjct: 334 NQLTTLPK--EVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQ 391

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           L +L EL L +N ++  P E+  L+ +LQ L L  NPL S  +   +   + V   LK+ 
Sbjct: 392 LQNLQELCLDENQLTTFPKEIRQLK-NLQELHLYLNPLSSKEKKGFEDYFQNVKFILKNI 450

Query: 419 I 419
           I
Sbjct: 451 I 451



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 184/368 (50%), Gaps = 43/368 (11%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ IG L  L RL+L+  ++ ++P  I    +L E  +  N+L+ LP E+G+L  L  L
Sbjct: 63  LPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 122

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DLH N+L    +E  QL+ L  LDL++N L+ LP EI ++  L++L L  N L TL    
Sbjct: 123 DLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL---- 178

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                P  +  L++                   + T  S+ ++        L+ +P EI 
Sbjct: 179 -----PKEIGQLQN-------------------LKTLNSIVTQ--------LTTLPKEIG 206

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           E   +  L+L  N +  LP E+    +L+ L+L  N+I   P  I   L +L  L L  N
Sbjct: 207 ELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEI-GQLQNLQWLDLHQN 265

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            L  +P +    +  LQ LDL  N + +LP+      L +LQEL L   QL   P +I +
Sbjct: 266 QLTTLPKE-IGQLQNLQRLDLHQNQLTTLPK--EIGQLQNLQELCLDENQLTTLPKEIEQ 322

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           LQ LR+LDL  N L ++P+    L SL  L L  N +S LP E+G L+ +LQ L L  N 
Sbjct: 323 LQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQ-NLQVLGLISNQ 381

Query: 396 LRSIRRTI 403
           L ++ + I
Sbjct: 382 LTTLPKEI 389



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 142/294 (48%), Gaps = 25/294 (8%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L++  LDL    L+ LP EIG++  L++L L    L TL         P  +  LR+   
Sbjct: 48  LKVRTLDLRYQKLTILPKEIGQLENLQRLNLNSQKLTTL---------PKEIGQLRNL-- 96

Query: 174 ENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 231
                E   +   L T+   +      + L L    L+ +P EI +   + +LDL+ N +
Sbjct: 97  ----QELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKL 152

Query: 232 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDI 289
             LP E+    +LQ L L RN++   P  I   L +L  L      L  +P +    +++
Sbjct: 153 TTLPKEIRQLRNLQELDLHRNQLTTLPKEI-GQLQNLKTLNSIVTQLTTLPKEIGELQNL 211

Query: 290 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
             L +LD    + +LP+      L +L+ L LR  ++   P +I +LQ L+ LDL QN L
Sbjct: 212 KTLNLLD--NQLTTLPK--EIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQL 267

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            ++P+    L +L  LDL  N ++ LP E+G L+ +LQ L LD N L ++ + I
Sbjct: 268 TTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ-NLQELCLDENQLTTLPKEI 320



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 118/229 (51%), Gaps = 8/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+SE+ T  +  +  A +  +  + L L    L+ +P EI +   + +L+L+   +  LP
Sbjct: 30  EESESGTYTD--LAKALQNPLKVRTLDLRYQKLTILPKEIGQLENLQRLNLNSQKLTTLP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L LS N +   P  +   L +L  L L  N L  +P +    +  LQ L
Sbjct: 88  KEIGQLRNLQELDLSFNSLTTLPKEV-GQLENLQRLDLHQNRLATLPME-IGQLKNLQEL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           DL+ N + +LP+      L +LQEL L R QL   P +I +LQ L+ L+     L ++P+
Sbjct: 146 DLNSNKLTTLPK--EIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNSIVTQLTTLPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L  L+L DN ++ LP E+G L+ +L+ L L  N + ++ + I
Sbjct: 204 EIGELQNLKTLNLLDNQLTTLPKEIGELQ-NLEILVLRENRITALPKEI 251


>gi|434388059|ref|YP_007098670.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
 gi|428019049|gb|AFY95143.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
          Length = 993

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 135/399 (33%), Positives = 200/399 (50%), Gaps = 23/399 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  NKLT +    I   T LT L   +N +  +P+ IG L+ L  L L  N+I  
Sbjct: 189 LEELYIWENKLTEIPQ-AIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAI 247

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP +I    SL    + +N ++ +P  +G L+ L +LDL  NQ+ E       L  L+ L
Sbjct: 248 IPEAIGNLTSLTALGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSL 307

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDS 178
            L NN ++ LP  IG +T+L  L L  N +  L  ++ N      L  L S  L  N+ +
Sbjct: 308 SLRNNQIAELPQTIGNLTSLTNLFLGRNKIAELPQTIGN------LTSLTSLYLSNNQIA 361

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E   T  +L       S+TS +LS     ++ +P  I     +T L+L  N I ELP  +
Sbjct: 362 ELPQTIGNLT------SLTSLDLSFN--QIAELPQTIGNLTSLTSLNLYNNQIAELPQTI 413

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
            +  SL  L LS N+I + P  I  +L+SL+ L L +N + ++P     ++  L  LDLS
Sbjct: 414 GNLTSLTNLFLSNNQIAELPQTI-GNLTSLTSLNLWSNQIAELPQT-IGNLTSLTSLDLS 471

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
           +N IA LP+     +L  L  L L   Q+ E    I  L  L  LDLS N +  +P+   
Sbjct: 472 FNQIAELPQ--MIGNLTSLTNLNLSFNQIAELLQTIGNLTSLSDLDLSNNQIAELPQTIG 529

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           NLTSLT+L L +N I+ +P     L  +L+ L L GNP+
Sbjct: 530 NLTSLTDLKLYNNQIAVIPEWFRSLN-NLEKLDLRGNPV 567



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 139/417 (33%), Positives = 209/417 (50%), Gaps = 22/417 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++KL + GNK+  L N   +  T LTEL    + L  +PE + SL+ L  L   +N +  
Sbjct: 97  LTKLYLYGNKIESLPN-WFSEMTRLTELGLGNSGLAEIPELVFSLTNLTYLGFSENNLQV 155

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P SIS   +L +  +G N+LS LP  +  L++L  L +  N+L E      +L  L+ L
Sbjct: 156 LPESISNLKNLKKLSLGGNSLSQLPESIALLTELEELYIWENKLTEIPQAIGKLTSLTSL 215

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPENE 176
           +L  N ++ LP  IGK+T+L  L L  N +  +  ++ N  +   L    ++   +PE  
Sbjct: 216 NLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIPEAIGNLTSLTALGLSSNQIAIIPEAI 275

Query: 177 DSEASTTKEDLI---------TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
            +  S T  DL          T+    S+TS  LSL    ++ +P  I     +T L L 
Sbjct: 276 GNLTSLTSLDLSFNQIAELPQTIGNLTSLTS--LSLRNNQIAELPQTIGNLTSLTNLFLG 333

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
           RN I ELP  + +  SL +L LS N+I + P  I  +L+SL+ L L  N + ++P     
Sbjct: 334 RNKIAELPQTIGNLTSLTSLYLSNNQIAELPQTI-GNLTSLTSLDLSFNQIAELPQT-IG 391

Query: 288 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
           ++  L  L+L  N IA LP+     +L  L  L+L   Q+ E P  I  L  L  L+L  
Sbjct: 392 NLTSLTSLNLYNNQIAELPQT--IGNLTSLTNLFLSNNQIAELPQTIGNLTSLTSLNLWS 449

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           N +  +P+   NLTSLT LDLS N I+ LP  +G L  SL  L L  N +  + +TI
Sbjct: 450 NQIAELPQTIGNLTSLTSLDLSFNQIAELPQMIGNL-TSLTNLNLSFNQIAELLQTI 505



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 195/400 (48%), Gaps = 22/400 (5%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           LT L   +N +  +P+ +  ++ L +L L+ N+I S+P+  S    L E  +GN+ L+ +
Sbjct: 74  LTSLDVWENKIKSLPDWLAQITNLTKLYLYGNKIESLPNWFSEMTRLTELGLGNSGLAEI 133

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +  L+ L  L    N L+        L+ L  L L  NSLS LP  I  +T L +L 
Sbjct: 134 PELVFSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESIALLTELEELY 193

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL-SVTSKELS 202
           +  N L  +  ++  G   +L       L EN+ +E       L  M  +L S+TS  L 
Sbjct: 194 IWENKLTEIPQAI--GKLTSLTSL---NLGENQIAE-------LPQMIGKLTSLTS--LK 239

Query: 203 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 262
           L    ++ IP  I     +T L LS N I  +P  + +  SL +L LS N+I + P  I 
Sbjct: 240 LWSNQIAIIPEAIGNLTSLTALGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIAELPQTI- 298

Query: 263 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 321
            +L+SL+ L L NN + ++P     ++  L  L L  N IA LP+     +L  L  LYL
Sbjct: 299 GNLTSLTSLSLRNNQIAELPQT-IGNLTSLTNLFLGRNKIAELPQT--IGNLTSLTSLYL 355

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGL 381
              Q+ E P  I  L  L  LDLS N +  +P+   NLTSLT L+L +N I+ LP  +G 
Sbjct: 356 SNNQIAELPQTIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLNLYNNQIAELPQTIGN 415

Query: 382 LEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
           L  SL  L L  N +  + +TI +  +   L    ++I E
Sbjct: 416 L-TSLTNLFLSNNQIAELPQTIGNLTSLTSLNLWSNQIAE 454



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 159/307 (51%), Gaps = 19/307 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N++  L    I + T LT L    N +  +P+TIG+L+ L  L L +N+I  
Sbjct: 281 LTSLDLSFNQIAELPQT-IGNLTSLTSLSLRNNQIAELPQTIGNLTSLTNLFLGRNKIAE 339

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P +I    SL   Y+ NN ++ LP  +G L+ L +LDL  NQ+ E       L  L+ L
Sbjct: 340 LPQTIGNLTSLTSLYLSNNQIAELPQTIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSL 399

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDS 178
           +L NN ++ LP  IG +T+L  L L+ N +  L  ++ N      L  L S  L  N+ +
Sbjct: 400 NLYNNQIAELPQTIGNLTSLTNLFLSNNQIAELPQTIGN------LTSLTSLNLWSNQIA 453

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E   T  +L       S+TS +LS     ++ +P  I     +T L+LS N I EL   +
Sbjct: 454 ELPQTIGNLT------SLTSLDLSFN--QIAELPQMIGNLTSLTNLNLSFNQIAELLQTI 505

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
            +  SL  L LS N+I + P  I  +L+SL+ LKL NN +  +P + F+ +  L+ LDL 
Sbjct: 506 GNLTSLSDLDLSNNQIAELPQTI-GNLTSLTDLKLYNNQIAVIP-EWFRSLNNLEKLDLR 563

Query: 299 YNIASLP 305
            N   +P
Sbjct: 564 GNPVPIP 570



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 176/390 (45%), Gaps = 58/390 (14%)

Query: 81  LSALPAELGKLSKLGTLDLH----------SNQLKEYCVEACQL-RLSVLDLSNNSLSGL 129
           L+ LP E+GKL+ L  L L            N L E       L +L+ LD+  N +  L
Sbjct: 28  LTELPPEIGKLTHLEKLILGKWDDKTGKAIGNLLTEIPPVILSLPKLTSLDVWENKIKSL 87

Query: 130 PPEIGKMTTLRKLLLTGNPLRTL----------------RSSLVNGPTPAL----LKYLR 169
           P  + ++T L KL L GN + +L                 S L   P        L YL 
Sbjct: 88  PDWLAQITNLTKLYLYGNKIESLPNWFSEMTRLTELGLGNSGLAEIPELVFSLTNLTYLG 147

Query: 170 ------SRLPENEDSEASTTKEDL-----------ITMATRLSVTSKELSLEGMNLSAIP 212
                   LPE+  +  +  K  L           I + T L    +EL +    L+ IP
Sbjct: 148 FSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESIALLTEL----EELYIWENKLTEIP 203

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
             I +   +T L+L  N I ELP  +    SL +L L  N+I   P+AI  +L+SL+ L 
Sbjct: 204 QAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIPEAI-GNLTSLTALG 262

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 331
           L +N +  +P +   ++  L  LDLS+N IA LP+     +L  L  L LR  Q+ E P 
Sbjct: 263 LSSNQIAIIP-EAIGNLTSLTSLDLSFNQIAELPQT--IGNLTSLTSLSLRNNQIAELPQ 319

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
            I  L  L  L L +N +  +P+   NLTSLT L LS+N I+ LP  +G L  SL +L L
Sbjct: 320 TIGNLTSLTNLFLGRNKIAELPQTIGNLTSLTSLYLSNNQIAELPQTIGNL-TSLTSLDL 378

Query: 392 DGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
             N +  + +TI +  +   L    ++I E
Sbjct: 379 SFNQIAELPQTIGNLTSLTSLNLYNNQIAE 408



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 158/348 (45%), Gaps = 34/348 (9%)

Query: 99  LHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL----------TGNP 148
           + + +  E    A + +   LDL+  +L+ LPPEIGK+T L KL+L           GN 
Sbjct: 1   MEAQEFLELIDRAAEEQWKELDLAGMNLTELPPEIGKLTHLEKLILGKWDDKTGKAIGNL 60

Query: 149 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK--------------EDLITMATRL 194
           L  +   +++ P    L    +++    D  A  T                +  +  TRL
Sbjct: 61  LTEIPPVILSLPKLTSLDVWENKIKSLPDWLAQITNLTKLYLYGNKIESLPNWFSEMTRL 120

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
           +    EL L    L+ IP  ++    +T L  S N++Q LP  +S+  +L+ L L  N +
Sbjct: 121 T----ELGLGNSGLAEIPELVFSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSL 176

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 313
              P++I   L+ L  L +  N L ++P      +  L  L+L  N IA LP+      L
Sbjct: 177 SQLPESI-ALLTELEELYIWENKLTEIPQ-AIGKLTSLTSLNLGENQIAELPQ--MIGKL 232

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
             L  L L   Q+   P  I  L  L  L LS N +  IPE   NLTSLT LDLS N I+
Sbjct: 233 TSLTSLKLWSNQIAIIPEAIGNLTSLTALGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIA 292

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
            LP  +G L  SL +L L  N +  + +TI +  +   L   ++KI E
Sbjct: 293 ELPQTIGNL-TSLTSLSLRNNQIAELPQTIGNLTSLTNLFLGRNKIAE 339



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 118/234 (50%), Gaps = 22/234 (9%)

Query: 13  VLSNNLIA-------SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
            LSNN IA       + T LT L  S N +  +P+TIG+L+ L  L+L+ N+I  +P +I
Sbjct: 354 YLSNNQIAELPQTIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLNLYNNQIAELPQTI 413

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 124
               SL   ++ NN ++ LP  +G L+ L +L+L SNQ+ E       L  L+ LDLS N
Sbjct: 414 GNLTSLTNLFLSNNQIAELPQTIGNLTSLTSLNLWSNQIAELPQTIGNLTSLTSLDLSFN 473

Query: 125 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 184
            ++ LP  IG +T+L  L L+ N +  L  ++ N  + + L      L  N+ +E   T 
Sbjct: 474 QIAELPQMIGNLTSLTNLNLSFNQIAELLQTIGNLTSLSDLD-----LSNNQIAELPQTI 528

Query: 185 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
            +L ++         +L L    ++ IP        + KLDL  N +  +PPE+
Sbjct: 529 GNLTSLT--------DLKLYNNQIAVIPEWFRSLNNLEKLDLRGNPV-PIPPEI 573


>gi|418755366|ref|ZP_13311573.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964377|gb|EKO32267.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 513

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 134/415 (32%), Positives = 202/415 (48%), Gaps = 17/415 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+LT   N  I     L  L  + N L  +P+ IG+L +L  L L  N + +
Sbjct: 86  LEELDLFHNRLTTFPNE-IVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLAT 144

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +PS I     L   Y+ NN L  LP E+GKL  L  L L  NQL     E  QL  L  L
Sbjct: 145 LPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQEIGQLENLQDL 204

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL--------VNGPTPALLKYLRSR 171
           D+SNN L+ LP EIGK+ +L++L L+ N L TL + +        +N     L+   +  
Sbjct: 205 DVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNLEELNLSNNQLITLPQEI 264

Query: 172 LPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
               E          LIT+   +    K   L L+  +L  +P+EI +   + +L L  N
Sbjct: 265 GQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHN 324

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP E+ +  +L +L +S N +   P+ I   L SL  L L+NN L  +P +  K  
Sbjct: 325 QLITLPQEIGTLQNLPSLDVSNNHLVTLPNEI-GKLLSLKRLNLENNQLTTLPKEIGKLQ 383

Query: 290 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
            +  +   +  +A+LP       L +LQ L L   QL+  P +I +L+ L+ L+L  N L
Sbjct: 384 NLPNLNLSNNQLATLPN--EIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQL 441

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP-LRSIRRTI 403
           +++P     L +L  L+L  N +  LP E+  L+  LQ L+L   P L S + TI
Sbjct: 442 KTLPNEIGRLQNLKVLNLGGNQLVTLPQEIVGLK-HLQILKLKNIPALLSEKETI 495



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 192/405 (47%), Gaps = 43/405 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
             K D E NK+    N  + +   +  L  S N L  +P  IG L +L  L+L  NR+ +
Sbjct: 16  FCKRDAEKNKVYRDFNEALKNPMDVRILYLSDNQLATLPNEIGKLRKLEWLNLSNNRLTT 75

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I    +L E  + +N L+  P E+ +L +L  L L  NQL     E   L +L  L
Sbjct: 76  LPNEIGRLQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHL 135

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L NN L+ LP EIG++  L++L L  N L TL   +  G    L               
Sbjct: 136 YLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEI--GKLQNL--------------- 178

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              ++L LE   L+ +P EI +   +  LD+S N +  LP E+ 
Sbjct: 179 -------------------EQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIG 219

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              SL+ L LS N +   P+ I   L +L  L L NN L  +P +    +  L+ L L +
Sbjct: 220 KLRSLKRLNLSNNLLITLPNEI-GKLQNLEELNLSNNQLITLPQE-IGQLQELEWLHLEH 277

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N + +LP+     +L  L+ LYL+   L   P +I +L+ L+ L L  N L ++P+    
Sbjct: 278 NQLITLPQ--EIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGT 335

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L +L  LD+S+N++  LP E+G L  SL+ L L+ N L ++ + I
Sbjct: 336 LQNLPSLDVSNNHLVTLPNEIGKL-LSLKRLNLENNQLTTLPKEI 379



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 121/377 (32%), Positives = 171/377 (45%), Gaps = 49/377 (12%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N+L  L N  I     L  L  S N L  +P  IG L  L  LDL  NR+ + P+ I   
Sbjct: 48  NQLATLPNE-IGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTFPNEIVRL 106

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLS 127
             L   Y+ +N L  LP E+G L KL  L L +N L     E  +L RL  L L NN L 
Sbjct: 107 QRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLYLYNNHLM 166

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            LP EIGK+  L +L L  N L TL   +              +L   +D + S      
Sbjct: 167 TLPKEIGKLQNLEQLYLEDNQLTTLPQEI-------------GQLENLQDLDVSNN---- 209

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
                              +L+ +P+EI +   + +L+LS N +  LP E+    +L+ L
Sbjct: 210 -------------------HLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNLEEL 250

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY----NIAS 303
            LS N++   P  I   L  L  L L++N L  +P    ++I  LQ L+  Y    ++ +
Sbjct: 251 NLSNNQLITLPQEI-GQLQELEWLHLEHNQLITLP----QEIGTLQKLEYLYLKNNHLET 305

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
           LP       L  L+ L+L   QL   P +I  LQ L  LD+S N L ++P     L SL 
Sbjct: 306 LPN--EIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPSLDVSNNHLVTLPNEIGKLLSLK 363

Query: 364 ELDLSDNNISALPPELG 380
            L+L +N ++ LP E+G
Sbjct: 364 RLNLENNQLTTLPKEIG 380


>gi|421110794|ref|ZP_15571285.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803891|gb|EKS10018.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 558

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 139/429 (32%), Positives = 206/429 (48%), Gaps = 31/429 (7%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+LTVL    I     L  L    N L  +P+ I +L +L  L L +N++ ++P 
Sbjct: 44  LDLTRNQLTVLPQE-IGKLQNLFSLYLENNQLTTLPQEIETLQKLKWLYLSENQLATLPK 102

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L   Y+G N L+ +P E+G L  L  L L++NQL     E   L+ L  L+L+
Sbjct: 103 EIGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLA 162

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR------------- 169
           NN L  LP EIG +  L+ L +  N L TL   +    T   LKYLR             
Sbjct: 163 NNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEI---GTLQNLKYLRLAYNQLTTLPKEI 219

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLS 227
            RL   +D   +     LIT+   +      + L+LE   L  +P EI    ++  L L+
Sbjct: 220 GRLENLQD--LNVFNNQLITLPQEIGTLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLT 277

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            N +  LP E+     L+ L L+ N++K  P  I   L +L  L L+NN L   P +   
Sbjct: 278 NNQLATLPKEIGKLQRLEWLGLANNQLKSLPQEI-GKLQNLKELILENNRLESFPKE-IG 335

Query: 288 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
            +  LQ L L YN   +LP+     +L  L  L L   QL   P +I RL++L  L+L  
Sbjct: 336 TLSNLQRLHLEYNGFTTLPQ--EIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYN 393

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDR 406
           N L ++P+    L  L  L L++N ++ LP E+G L+ +L+ L L+ N L ++   I   
Sbjct: 394 NRLATLPKEIGTLRKLQHLYLANNQLATLPKEIGQLQ-NLEDLDLEYNQLATLPEAI--- 449

Query: 407 GTKAVLKYL 415
           GT   L++L
Sbjct: 450 GTLQRLEWL 458



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 209/458 (45%), Gaps = 62/458 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L +E N+LT L    I +   L  L  S+N L  +P+ IG L RL RL L  N++ +IP 
Sbjct: 67  LYLENNQLTTLPQE-IETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQ 125

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L E  + NN L  LP E+G L  L  L+L +NQL+    E   L+ L  L++ 
Sbjct: 126 EIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVF 185

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL---PENEDS- 178
           NN L  LP EIG +  L+ L L  N L TL   +        L    ++L   P+   + 
Sbjct: 186 NNQLITLPQEIGTLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNVFNNQLITLPQEIGTL 245

Query: 179 ----EASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
                 +     LIT+   +    K   L L    L+ +P EI +   +  L L+ N ++
Sbjct: 246 QNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLANNQLK 305

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILT----------------------SLSSLSC 270
            LP E+    +L+ LIL  N+++ +P  I T                      +L  L  
Sbjct: 306 SLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNGFTTLPQEIGTLHRLPW 365

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 329
           L L++N L  +P +    +  L+ L+L  N +A+LP+     +L  LQ LYL   QL   
Sbjct: 366 LNLEHNQLTTLPQE-IGRLERLEWLNLYNNRLATLPK--EIGTLRKLQHLYLANNQLATL 422

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEG-----------FKN------------LTSLTELD 366
           P +I +LQ L  LDL  N L ++PE             KN            L  + +L+
Sbjct: 423 PKEIGQLQNLEDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLN 482

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
           L++N +  LP E+G L+ +L+ L L GNP  +  + I+
Sbjct: 483 LANNQLRTLPQEIGQLQ-NLKDLDLSGNPFTTFPQEIV 519



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 170/380 (44%), Gaps = 64/380 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  N+LT L    I     L +L    N L  +P+ IG+L  L  L+L  NR+++
Sbjct: 202 LKYLRLAYNQLTTLPKE-IGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLIT 260

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I     L   Y+ NN L+ LP E+GKL +L  L L +NQLK    E  +L+ L  L
Sbjct: 261 LPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLANNQLKSLPQEIGKLQNLKEL 320

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L NN L   P EIG ++ L++L L  N   TL         P  +  L  RLP      
Sbjct: 321 ILENNRLESFPKEIGTLSNLQRLHLEYNGFTTL---------PQEIGTLH-RLP------ 364

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                L+LE   L+ +P EI     +  L+L  N +  LP E+ 
Sbjct: 365 --------------------WLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIG 404

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +   LQ L L+ N++   P  I   L +L  L L+ N L                     
Sbjct: 405 TLRKLQHLYLANNQLATLPKEI-GQLQNLEDLDLEYNQL--------------------- 442

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
             A+LPE     +L  L+ L L+  QL   P +I  LQ++  L+L+ N L+++P+    L
Sbjct: 443 --ATLPE--AIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRTLPQEIGQL 498

Query: 360 TSLTELDLSDNNISALPPEL 379
            +L +LDLS N  +  P E+
Sbjct: 499 QNLKDLDLSGNPFTTFPQEI 518



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 155/306 (50%), Gaps = 25/306 (8%)

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
           +LDL+ N L+ LP EIGK+  L  L L  N L TL   +    T   LK+L      +E+
Sbjct: 43  MLDLTRNQLTVLPQEIGKLQNLFSLYLENNQLTTLPQEI---ETLQKLKWLYL----SEN 95

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
             A+  KE  I    RL    + L L G  L+ IP EI    ++ +L L  N +  LP E
Sbjct: 96  QLATLPKE--IGKLQRL----ERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQE 149

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           + +   L+ L L+ N+++  P  I T L  L  L + NN L  +P +    +  L+ L L
Sbjct: 150 IGTLQDLEELNLANNQLRTLPKEIGT-LQHLQDLNVFNNQLITLPQE-IGTLQNLKYLRL 207

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
           +YN + +LP+      L +LQ+L +   QL   P +I  LQ L+ L+L  N L ++P+  
Sbjct: 208 AYNQLTTLPK--EIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLITLPKEI 265

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
             L  L  L L++N ++ LP E+G L+  L+ L L  N L+S+ + I        L+ LK
Sbjct: 266 GTLQKLEWLYLTNNQLATLPKEIGKLQ-RLEWLGLANNQLKSLPQEI------GKLQNLK 318

Query: 417 DKIPEN 422
           + I EN
Sbjct: 319 ELILEN 324



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 18/196 (9%)

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P ++W       LDL+RN +  LP E+    +L +L L  N++   P  I T L  L  L
Sbjct: 38  PMDVW------MLDLTRNQLTVLPQEIGKLQNLFSLYLENNQLTTLPQEIET-LQKLKWL 90

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSY----NIASLPENPPFSSLPHLQELYLRRMQLR 327
            L  N L  +P    K+I  LQ L+  Y     + ++P+     +L  L+EL L   QL 
Sbjct: 91  YLSENQLATLP----KEIGKLQRLERLYLGGNQLTTIPQ--EIGALQDLEELSLYNNQLI 144

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
             P +I  LQ L  L+L+ N L+++P+    L  L +L++ +N +  LP E+G L+ +L+
Sbjct: 145 TLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQ-NLK 203

Query: 388 ALRLDGNPLRSIRRTI 403
            LRL  N L ++ + I
Sbjct: 204 YLRLAYNQLTTLPKEI 219


>gi|260788694|ref|XP_002589384.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
 gi|229274561|gb|EEN45395.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
          Length = 936

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 188/399 (47%), Gaps = 44/399 (11%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           KLD+    LT +   +    T L  L  S N L+ +PE IG L +L RLD   N + S+P
Sbjct: 17  KLDLSNQDLTSIPEEVF-DITDLEFLDVSNNKLSSIPEAIGRLQKLYRLDADGNMLKSLP 75

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
            +I     L   Y+  N L+ LP  + KL KL  L +  NQL +     C L  L VLD 
Sbjct: 76  QAIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPGVCMLPSLEVLDA 135

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
           SNN LS  PP + K+  LR+L + GN L  +       P    L      LP  E  + S
Sbjct: 136 SNNKLSTFPPGVEKLQKLRELGIDGNQLTEV-------PPGVFL------LPNLEVLDVS 182

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
             K                       LS  P  + +  ++ +L ++ N + E+PP + S 
Sbjct: 183 NNK-----------------------LSTFPPGVKKLQKLRELRINDNQLTEVPPGVCSL 219

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 300
            +L+ L +  N +  +P  +   L  L  L +++N L +VPS G   +P L+ L +  N 
Sbjct: 220 PNLEVLNVDNNNLSAFPPGV-EKLQKLRGLGINDNQLTEVPS-GVCSLPNLEALGVGNNK 277

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
           +++ P  P    L  L+ L++   QL E P+ +  L  L +L + +N L + P G + L 
Sbjct: 278 LSTFP--PGVEKLQKLRVLHIYGNQLTEVPSGVCSLPNLELLHVGKNKLSTFPPGVEKLQ 335

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            L EL ++DN ++ +P  +  L P+L+ L +  NP+R +
Sbjct: 336 KLRELHINDNQLTEVPSGVCSL-PNLELLNVSNNPIRRL 373



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 207/476 (43%), Gaps = 61/476 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD +GN L  L    I S   LT L   +N L  +P  I  L +L  L +  N++  
Sbjct: 61  LYRLDADGNMLKSLPQ-AIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTK 119

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  +    SL      NN LS  P  + KL KL  L +  NQL E       L  L VL
Sbjct: 120 VPPGVCMLPSLEVLDASNNKLSTFPPGVEKLQKLRELGIDGNQLTEVPPGVFLLPNLEVL 179

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT---------------PAL 164
           D+SNN LS  PP + K+  LR+L +  N L  +   + + P                P +
Sbjct: 180 DVSNNKLSTFPPGVKKLQKLRELRINDNQLTEVPPGVCSLPNLEVLNVDNNNLSAFPPGV 239

Query: 165 LKYLRSRLPENEDSEASTTKEDLITMAT--RLSVTSKELS----------------LEGM 206
            K  + R     D++ +     + ++     L V + +LS                + G 
Sbjct: 240 EKLQKLRGLGINDNQLTEVPSGVCSLPNLEALGVGNNKLSTFPPGVEKLQKLRVLHIYGN 299

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            L+ +PS +     +  L + +N +   PP +     L+ L ++ N++ + P  +  SL 
Sbjct: 300 QLTEVPSGVCSLPNLELLHVGKNKLSTFPPGVEKLQKLRELHINDNQLTEVPSGV-CSLP 358

Query: 267 SLSCLKLDNNPLRQVPSD---------------GFKDIP--MLQILDLSYNIASLPENPP 309
           +L  L + NNP+R++P+D                F + P  +LQ+  L    A       
Sbjct: 359 NLELLNVSNNPIRRLPNDVTRLTRLKNLDVHCCQFDEFPRQVLQLKTLEKLYAGQSVGRK 418

Query: 310 FSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
           F  +P       HL  L L    LR  P+ + RL  LR + L  N   + PE    L ++
Sbjct: 419 FDMVPDEVGNLQHLWYLALENNLLRTLPSTMSRLHNLREVHLWNNKFDTFPEVLCELPAM 478

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
            +LD+S+NNI+ LP  L   +  L+ L + GNPL    + + ++GT A++ +LK +
Sbjct: 479 EKLDISNNNITRLPTALHRAD-KLKDLDVSGNPLTYPPQDVCEQGTGAIMAFLKQE 533



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 28/203 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+LT + +  + S   L  L  S N +  +P  +  L+RL  LD+H  +   
Sbjct: 337 LRELHINDNQLTEVPSG-VCSLPNLELLNVSNNPIRRLPNDVTRLTRLKNLDVHCCQFDE 395

Query: 61  IPSSISGCCSLAEFYMG--------------------------NNALSALPAELGKLSKL 94
            P  +    +L + Y G                          NN L  LP+ + +L  L
Sbjct: 396 FPRQVLQLKTLEKLYAGQSVGRKFDMVPDEVGNLQHLWYLALENNLLRTLPSTMSRLHNL 455

Query: 95  GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             + L +N+   +    C+L  +  LD+SNN+++ LP  + +   L+ L ++GNPL    
Sbjct: 456 REVHLWNNKFDTFPEVLCELPAMEKLDISNNNITRLPTALHRADKLKDLDVSGNPLTYPP 515

Query: 154 SSLVNGPTPALLKYLRSRLPENE 176
             +    T A++ +L+    ++E
Sbjct: 516 QDVCEQGTGAIMAFLKQEAEKDE 538


>gi|410451731|ref|ZP_11305733.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014497|gb|EKO76627.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 394

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 181/361 (50%), Gaps = 43/361 (11%)

Query: 37  GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 96
            +P+ IG+L  L  L+L +N++ +IP  I     L +  +G N ++ LP E+GKL  L  
Sbjct: 51  ALPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQKLDLGFNKITVLPNEIGKLQSLQE 110

Query: 97  LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
           L+L  NQL     E  +L+ L  L L  N L+ LP EIGK+  L++L L  N L T+   
Sbjct: 111 LNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTLPKEIGKLQNLQELHLWENQLTTIPQE 170

Query: 156 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 215
           + N      L+ L                              KEL L   NL+ +P E+
Sbjct: 171 IGN------LQNL------------------------------KELYLMHNNLTTLPKEV 194

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
            +   + KL L +N +  LP E+    +L+ L L+ N+    P  I  +L +L  L L  
Sbjct: 195 GQLQNLQKLILDKNQLTTLPQEIGKLQNLRGLALTGNQFTTLPKEI-GNLQNLQGLALTR 253

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N L  +P +   ++  LQ L L +N + +LP+     +L +L++L LR  QL   P +I 
Sbjct: 254 NQLTTLPKE-IGNLQKLQELRLDHNQLTTLPK--EIGNLQNLKDLNLRSNQLTTIPQEIG 310

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            LQ L  L+LS N L ++P+  +NL SL  LDLS N +++ P E+G L+  L+ LRL+  
Sbjct: 311 NLQNLEYLNLSSNQLTALPKEIENLQSLESLDLSGNPLTSFPEEIGKLQ-HLKRLRLENI 369

Query: 395 P 395
           P
Sbjct: 370 P 370



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 138/300 (46%), Gaps = 37/300 (12%)

Query: 1   MSKLDVEGNKLTVLSNNL----------------------IASWTMLTELIASKNLLNGM 38
           + KLD+  NK+TVL N +                      I     L  L    N L  +
Sbjct: 85  LQKLDLGFNKITVLPNEIGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTL 144

Query: 39  PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 98
           P+ IG L  L  L L +N++ +IP  I    +L E Y+ +N L+ LP E+G+L  L  L 
Sbjct: 145 PKEIGKLQNLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLI 204

Query: 99  LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
           L  NQL     E  +L+ L  L L+ N  + LP EIG +  L+ L LT N L TL   + 
Sbjct: 205 LDKNQLTTLPQEIGKLQNLRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLTTLPKEIG 264

Query: 158 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 217
           N     L K    RL  N+ +       +L  +        K+L+L    L+ IP EI  
Sbjct: 265 N-----LQKLQELRLDHNQLTTLPKEIGNLQNL--------KDLNLRSNQLTTIPQEIGN 311

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              +  L+LS N +  LP E+ +  SL++L LS N +  +P+ I   L  L  L+L+N P
Sbjct: 312 LQNLEYLNLSSNQLTALPKEIENLQSLESLDLSGNPLTSFPEEI-GKLQHLKRLRLENIP 370


>gi|301112346|ref|XP_002905252.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262095582|gb|EEY53634.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 785

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 152/526 (28%), Positives = 225/526 (42%), Gaps = 133/526 (25%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +EGNKLT L  + I     L  L    N L  +P TIG L  L  L  H N+I +
Sbjct: 141 LRELGLEGNKLTQLPES-IGGLVHLEVLRVESNQLKALPSTIGKLRNLKTLTAHSNQIAA 199

Query: 61  IPSSISG------------CCS----------------------------------LAEF 74
           +P+S +             C +                                  L + 
Sbjct: 200 LPASFNSLTGLLTLDLKKNCLATTGDAFLELTAVKYIDLRQNKLEIFPTLPENNSCLDQL 259

Query: 75  YMGNNALSALPAE--LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPP 131
           ++G N L  +P E  L     L  LD+  N+L+       QL RL  LD++NN L  LPP
Sbjct: 260 FLGFNLLRDVPQEVVLSVKESLTVLDVRDNKLQRLSDGIPQLYRLKTLDVTNNDLFDLPP 319

Query: 132 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-------NEDSEASTTK 184
             G +  L  LL+ GNPLR++R S+++  T  L KYLR+R           E+ +    +
Sbjct: 320 GFGYLKYLTHLLVEGNPLRSIRRSIISAGTEPLKKYLRTRGKPPVGVDAMEEEVDEFAIR 379

Query: 185 EDLIT----MAT----------RLSVTSKELSLEGMNLSAIPSEIWEAGE------ITKL 224
           +++I     MA           R +  S  L L  M L  +P ++  AG+      + +L
Sbjct: 380 QEVIEQDEPMAEEPPLEDEYLFRNAAASGNLQLVDMKLQNLPYQLHAAGKHRFGESLLQL 439

Query: 225 DLSRNSIQELPPELSSCASLQTLI-----------------------LSRNKIK-DWPDA 260
           +LS+N + ELP       SLQTL                        LS+N +  D   A
Sbjct: 440 NLSKNWLVELPATAGQLTSLQTLTAEQCGLKSVHASIAMLPRLEHLRLSKNSLTTDAVTA 499

Query: 261 ILTS------LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 314
           +L S       SSL  L L NN L  +P +  +++  +  L LS+N        P+SS+ 
Sbjct: 500 MLASGTRAGISSSLKELDLRNNVLTDIPQN-LQNLQAMDTLLLSFNRIKGLNGFPWSSM- 557

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
                                  QL +L ++ N L+S    ++    LT L L +N +  
Sbjct: 558 ----------------------SQLSVLSIAHNRLESCGTVYQ-APKLTSLSLENNELRQ 594

Query: 375 LPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           +P E  L E +L+AL L GNP R IR  IL+ GT+AVLKYL++++P
Sbjct: 595 IPAEFALCE-NLRALYLGGNPQRGIRAHILNSGTEAVLKYLRNRLP 639



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 95/206 (46%), Gaps = 17/206 (8%)

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI-------------WEAGEITKLD 225
           EA   +   +    RL+  S  L+L   +    P+E+             WE   + KLD
Sbjct: 16  EAPAAQNSAMARTLRLARQSGSLNLSSRDFHVFPNEVFRLYDELDEDEHSWECAVLKKLD 75

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           LS N I ELP E+ +   L +L +  N ++  P   L SL +L+ L L NN L     + 
Sbjct: 76  LSYNEIAELPNEVETLKYLVSLKMRHNHLRQLP-LTLWSLETLTSLDLSNNELEGCLPEQ 134

Query: 286 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
              +  L+ L L  N +  LPE+     L HL+ L +   QL+  P+ I +L+ L+ L  
Sbjct: 135 LGKLDKLRELGLEGNKLTQLPES--IGGLVHLEVLRVESNQLKALPSTIGKLRNLKTLTA 192

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDN 370
             N + ++P  F +LT L  LDL  N
Sbjct: 193 HSNQIAALPASFNSLTGLLTLDLKKN 218



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 179/436 (41%), Gaps = 87/436 (19%)

Query: 22  WTM--LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           W++  LT L  S N L G +PE +G L +L  L L  N++  +P SI G   L    + +
Sbjct: 112 WSLETLTSLDLSNNELEGCLPEQLGKLDKLRELGLEGNKLTQLPESIGGLVHLEVLRVES 171

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L ALP+ +GKL  L TL  HSNQ+         L  L  LDL  N L+       ++T
Sbjct: 172 NQLKALPSTIGKLRNLKTLTAHSNQIAALPASFNSLTGLLTLDLKKNCLATTGDAFLELT 231

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            ++ + L  N L          PT          LPEN     ++  + L          
Sbjct: 232 AVKYIDLRQNKLEIF-------PT----------LPEN-----NSCLDQLFL-------- 261

Query: 198 SKELSLEGMN-LSAIPSEIWEAGE--ITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
                  G N L  +P E+  + +  +T LD+  N +Q L   +     L+TL ++ N +
Sbjct: 262 -------GFNLLRDVPQEVVLSVKESLTVLDVRDNKLQRLSDGIPQLYRLKTLDVTNNDL 314

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQV---------------------PSDGFKDIPMLQ 293
            D P      L  L+ L ++ NPLR +                     P  G  D    +
Sbjct: 315 FDLPPG-FGYLKYLTHLLVEGNPLRSIRRSIISAGTEPLKKYLRTRGKPPVGV-DAMEEE 372

Query: 294 ILDLSYNIASLPENPPFSSLPHLQELYLRR------------MQLREAPTDILRLQQLRI 341
           + + +     + ++ P +  P L++ YL R            M+L+  P  +    + R 
Sbjct: 373 VDEFAIRQEVIEQDEPMAEEPPLEDEYLFRNAAASGNLQLVDMKLQNLPYQLHAAGKHRF 432

Query: 342 ------LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
                 L+LS+N L  +P     LTSL  L      + ++   + +L P L+ LRL  N 
Sbjct: 433 GESLLQLNLSKNWLVELPATAGQLTSLQTLTAEQCGLKSVHASIAML-PRLEHLRLSKNS 491

Query: 396 LRSIRRT-ILDRGTKA 410
           L +   T +L  GT+A
Sbjct: 492 LTTDAVTAMLASGTRA 507


>gi|256396794|ref|YP_003118358.1| phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
 gi|256363020|gb|ACU76517.1| Phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
          Length = 1263

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 140/406 (34%), Positives = 196/406 (48%), Gaps = 24/406 (5%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +L + GN LT L     A    LT L   +N    +PE +G LS L +L L +N++  +P
Sbjct: 97  ELSLTGNGLTTLPEEF-ARLERLTSLWLDENAFTALPEVVGHLSSLTQLYLQKNQLPGLP 155

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
            S+ G  SL    +  N L+ LP  +G    L  L    N L E       L RL  L L
Sbjct: 156 DSL-GAPSLHTLVLDGNHLAELPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQELSL 214

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEA 180
           + N L  LP  IG M +L KL L  N L+TL +S+ N      L  L++  L  N   E 
Sbjct: 215 TGNRLRKLPTSIGDMASLTKLYLQKNQLQTLPASIGN------LSELQTLALSGNHLEEL 268

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
             +  DL    +RL+    EL+L    L+ +P  I     + KL L+ N + ELPP L +
Sbjct: 269 PASVADL----SRLT----ELNLADNWLTHVPEAIGRLASLDKLSLTYNRLTELPPSLGA 320

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY- 299
              L  L +SRN + D PD+    L++L  L L  NPL  +PS     +  L  L L+Y 
Sbjct: 321 LRVLTALDVSRNSLHDLPDS-FDGLANLDTLNLAQNPLTSLPS-SVGALKRLTWLSLAYC 378

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           ++ +LP       L  L+ L L    LR+ P  +  L  L  L+L+ N L  +P     L
Sbjct: 379 DLETLPAG--LGGLHRLETLDLVGNNLRDLPFQLSGLGALTTLNLASNQLSWVPRTLGLL 436

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
            +L  LDL+DN +S+LP  LG LE SL+ L +  N L  I R++ D
Sbjct: 437 RNLVNLDLADNELSSLPRALGGLE-SLRKLDVAENQLTWIPRSVCD 481



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 126/382 (32%), Positives = 186/382 (48%), Gaps = 27/382 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L ++GN L  L +  I     L  L A  N+L  +P +IG+L RL  L L  NR+  
Sbjct: 163 LHTLVLDGNHLAELPD-WIGDTQSLVALSADDNVLTELPPSIGALIRLQELSLTGNRLRK 221

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+SI    SL + Y+  N L  LPA +G LS+L TL L  N L+E       L RL+ L
Sbjct: 222 LPTSIGDMASLTKLYLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVADLSRLTEL 281

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L++N L+ +P  IG++ +L KL LT N L  L  SL        L   R+ L +  DS 
Sbjct: 282 NLADNWLTHVPEAIGRLASLDKLSLTYNRLTELPPSLGALRVLTALDVSRNSLHDLPDSF 341

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                 D + +A                L+++PS +     +T L L+   ++ LP  L 
Sbjct: 342 DGLANLDTLNLAQN-------------PLTSLPSSVGALKRLTWLSLAYCDLETLPAGLG 388

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ---ILD 296
               L+TL L  N ++D P   L+ L +L+ L L +N L  VP    + + +L+    LD
Sbjct: 389 GLHRLETLDLVGNNLRDLP-FQLSGLGALTTLNLASNQLSWVP----RTLGLLRNLVNLD 443

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L+ N ++SLP       L  L++L +   QL   P  +  L +L  L L  N L  +P  
Sbjct: 444 LADNELSSLPR--ALGGLESLRKLDVAENQLTWIPRSVCDLPKLETLVLRGNRLADLPTS 501

Query: 356 FKNLTSLTELDLSDNN-ISALP 376
                +L ELDLSDN  +SA+P
Sbjct: 502 NWQKLTLKELDLSDNPLLSAVP 523



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 167/360 (46%), Gaps = 41/360 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           +T L  S N L  +PET+G ++ L RL L  N    +P  ++    L E  +  N L+ L
Sbjct: 49  VTFLNLSGNRLATLPETLGEVTGLRRLWLDSNGFGELPPQVALLGGLVELSLTGNGLTTL 108

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P E  +L +L +L L  N           L  L+ L L  N L GLP  +G   +L  L+
Sbjct: 109 PEEFARLERLTSLWLDENAFTALPEVVGHLSSLTQLYLQKNQLPGLPDSLGA-PSLHTLV 167

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L GN L  L         P  +   +S +  + D    T     I    RL    +ELSL
Sbjct: 168 LDGNHLAEL---------PDWIGDTQSLVALSADDNVLTELPPSIGALIRL----QELSL 214

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
            G  L  +P+ I +   +TKL L +N +Q LP  + + + LQTL LS N +++ P A + 
Sbjct: 215 TGNRLRKLPTSIGDMASLTKLYLQKNQLQTLPASIGNLSELQTLALSGNHLEELP-ASVA 273

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ L L +N L  VP +    +  L  L L+YN                       
Sbjct: 274 DLSRLTELNLADNWLTHVP-EAIGRLASLDKLSLTYN----------------------- 309

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            +L E P  +  L+ L  LD+S+NSL  +P+ F  L +L  L+L+ N +++LP  +G L+
Sbjct: 310 -RLTELPPSLGALRVLTALDVSRNSLHDLPDSFDGLANLDTLNLAQNPLTSLPSSVGALK 368



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 146/310 (47%), Gaps = 42/310 (13%)

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK 135
           + N  L+ LPAE G+L +LG +                   + L+LS N L+ LP  +G+
Sbjct: 28  LSNLGLTGLPAEFGRLPELGPV-------------------TFLNLSGNRLATLPETLGE 68

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           +T LR+L L  N    L       P  ALL  L          E S T   L T+    +
Sbjct: 69  VTGLRRLWLDSNGFGELP------PQVALLGGL---------VELSLTGNGLTTLPEEFA 113

Query: 196 VTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
              +   L L+    +A+P  +     +T+L L +N +  LP  L    SL TL+L  N 
Sbjct: 114 RLERLTSLWLDENAFTALPEVVGHLSSLTQLYLQKNQLPGLPDSLG-APSLHTLVLDGNH 172

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 312
           + + PD I     SL  L  D+N L ++P      +  LQ L L+ N +  LP +     
Sbjct: 173 LAELPDWI-GDTQSLVALSADDNVLTELPP-SIGALIRLQELSLTGNRLRKLPTS--IGD 228

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           +  L +LYL++ QL+  P  I  L +L+ L LS N L+ +P    +L+ LTEL+L+DN +
Sbjct: 229 MASLTKLYLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVADLSRLTELNLADNWL 288

Query: 373 SALPPELGLL 382
           + +P  +G L
Sbjct: 289 THVPEAIGRL 298


>gi|183233672|ref|XP_652025.2| leucine rich repeat / protein phosphatase 2C domain containing
           protein [Entamoeba histolytica HM-1:IMSS]
 gi|169801462|gb|EAL46639.2| leucine rich repeat / protein phosphatase 2C domain containing
           protein [Entamoeba histolytica HM-1:IMSS]
          Length = 850

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 200/401 (49%), Gaps = 41/401 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
            +++++LT L    N +N  P+ I  L  L  LDL  N I SIP +I    +L+E  MG 
Sbjct: 46  FSNFSLLTLLRLRGNNINKFPDPILDLQSLKCLDLSNNHITSIPPNIVCLNNLSELIMGQ 105

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L++LP E+G ++ L  + L +N LKE  +E C L +L+ +DLSNN+    P  +GK++
Sbjct: 106 NNLTSLPKEIGIMTTLVNITLPANNLKELPLEICSLTKLTFVDLSNNNFDNFPQVLGKLS 165

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSV 196
            +R L +  N L  L+   + G     +K+L   +L  N+ ++      +L  + +    
Sbjct: 166 NIRTLWMFYNNLNKLKG--IEG-----IKHLNQLKLLHNKFTQIPKQIFNLTELCS---- 214

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
               L L+   +  IP EI E  ++ ++  +   IQ +P E+ S ++LQ L++ R+++ +
Sbjct: 215 ----LELDNNLIRKIPPEIKELKKLKEIAFTDCLIQRIPEEIVSLSNLQELVIVRSRVNE 270

Query: 257 WP---------------DAILTSLSSL---SCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +P               D+++T +S      C+ L+NN L ++     K  P   +  L+
Sbjct: 271 FPRFLRKMPKISNLIITDSLITEVSCTLNNCCIILENNKLTEI-----KCTPNDNVFTLN 325

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
                L + P  + L  + ELYL    +++     L    L+IL L+ N L S PE   +
Sbjct: 326 LCNNHLKKIPNTTDLQTIHELYLTNNFIQQIEQTELH-SNLKILTLASNKLTSFPEKGIS 384

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
              L EL+LS+N IS LP  L    P L+ L+L  N L +I
Sbjct: 385 YNKLKELNLSNNGISQLPNNLFTFLPYLKILKLGINQLTTI 425



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 191/425 (44%), Gaps = 39/425 (9%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N +T +  N++     L+ELI  +N L  +P+ IG ++ L+ + L  N +  +P 
Sbjct: 78  LDLSNNHITSIPPNIVC-LNNLSELIMGQNNLTSLPKEIGIMTTLVNITLPANNLKELPL 136

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL---------------HSNQLKEYC 108
            I     L    + NN     P  LGKLS + TL +               H NQLK   
Sbjct: 137 EICSLTKLTFVDLSNNNFDNFPQVLGKLSNIRTLWMFYNNLNKLKGIEGIKHLNQLKLLH 196

Query: 109 VEACQL--------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 160
            +  Q+         L  L+L NN +  +PPEI ++  L+++  T   ++ +   +V+  
Sbjct: 197 NKFTQIPKQIFNLTELCSLELDNNLIRKIPPEIKELKKLKEIAFTDCLIQRIPEEIVSLS 256

Query: 161 TPALLKYLRSRLPENEDSEASTTK-EDLI---TMATRLSVTSKELS--LEGMNLSAIPSE 214
               L  +RSR+ E         K  +LI   ++ T +S T       LE   L+ I  +
Sbjct: 257 NLQELVIVRSRVNEFPRFLRKMPKISNLIITDSLITEVSCTLNNCCIILENNKLTEI--K 314

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
                 +  L+L  N ++++P   +   ++  L L+ N I+      L S  +L  L L 
Sbjct: 315 CTPNDNVFTLNLCNNHLKKIP-NTTDLQTIHELYLTNNFIQQIEQTELHS--NLKILTLA 371

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
           +N L   P  G      L+ L+LS N I+ LP N  F+ LP+L+ L L   QL   PT +
Sbjct: 372 SNKLTSFPEKGI-SYNKLKELNLSNNGISQLPNNL-FTFLPYLKILKLGINQLTTIPTSL 429

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
             L QL  L+LS N L   P     LTSLT L L+ N I  LP  L  L  +LQ +    
Sbjct: 430 GILNQLEELNLSHNKLTEFPLNILKLTSLTNLYLTHNYICDLPKNLSQLN-NLQVVDFSS 488

Query: 394 NPLRS 398
           N + S
Sbjct: 489 NNIIS 493


>gi|418727710|ref|ZP_13286298.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959068|gb|EKO22845.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 423

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 126/373 (33%), Positives = 183/373 (49%), Gaps = 20/373 (5%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           LI S+  L  +P+ I  L  L  LDL  N++ ++P  I    +L    +  N L+ALP E
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 146
           +G+L  L  L L++NQL     E  QL+ L +LDL NN L+ LP EIG++  L++L L+ 
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSY 170

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
           N L TL   +       LL    S+L         T     I     L     EL L   
Sbjct: 171 NQLTTLPKEIGKLENLQLLSLYESQL---------TILPQEIGKLQNLH----ELDLSHN 217

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            L+ +P EI +   + +  L  N +  LP E+    +L  L L  N++   P  I   L 
Sbjct: 218 QLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEI-GQLQ 276

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
           +L    LDNN    +P +    +  LQ L LSYN + + P+      L  LQ L L   Q
Sbjct: 277 NLQRFVLDNNQFTILPKE-IGQLQNLQELYLSYNQLTTFPK--EIGKLQKLQTLNLWNNQ 333

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L   P +I +L+ L+ L+LS+N L++IP+    L +L  LDLS+N ++ LP E+  L+ +
Sbjct: 334 LTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKLLDLSNNQLTTLPKEIEQLK-N 392

Query: 386 LQALRLDGNPLRS 398
           LQ L L  N   S
Sbjct: 393 LQTLNLWNNQFSS 405



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 158/371 (42%), Gaps = 64/371 (17%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N+LT L    I     L  L  + N L  +P  I  L  L  LDL  N++  +P  I   
Sbjct: 102 NQLTALPKE-IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQL 160

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 127
            +L E Y+  N L+ LP E+GKL  L  L L+ +QL     E  +L+ L  LDLS+N L+
Sbjct: 161 QNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLT 220

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            LP EIG++  L++ +L  N L  L   +  G    L                       
Sbjct: 221 ILPKEIGQLQNLQRFVLDNNQLTILPKEI--GKLQNL----------------------- 255

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
                       EL L    L+ +P EI +   + +  L  N    LP E+    +LQ L
Sbjct: 256 -----------HELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQEL 304

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 307
            LS N++  +P  I   L  L  L L NN L  +P +                       
Sbjct: 305 YLSYNQLTTFPKEI-GKLQKLQTLNLWNNQLTTLPEE----------------------- 340

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                L +L+ L L   QL+  P +I +LQ L++LDLS N L ++P+  + L +L  L+L
Sbjct: 341 --IEQLKNLKTLNLSENQLKTIPQEIGQLQNLKLLDLSNNQLTTLPKEIEQLKNLQTLNL 398

Query: 368 SDNNISALPPE 378
            +N  S+   E
Sbjct: 399 WNNQFSSQEKE 409



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/228 (35%), Positives = 122/228 (53%), Gaps = 7/228 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E   T +DL T A +  +  + L L    L+ +P EI +   +  LDL  N +  LP 
Sbjct: 28  QAEEPGTYQDL-TKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPK 86

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    +LQ LIL  N++   P  I   L +L  L L+NN L  +P++  + +  LQ+LD
Sbjct: 87  EIGQLKNLQLLILYYNQLTALPKEI-GQLKNLKVLFLNNNQLTTLPTE-IRQLKNLQMLD 144

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N +  LP+      L +LQELYL   QL   P +I +L+ L++L L ++ L  +P+ 
Sbjct: 145 LGNNQLTILPK--EIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQE 202

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L +L ELDLS N ++ LP E+G L+ +LQ   LD N L  + + I
Sbjct: 203 IGKLQNLHELDLSHNQLTILPKEIGQLQ-NLQRFVLDNNQLTILPKEI 249



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 139/314 (44%), Gaps = 40/314 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT+L    I     L EL  S N L  +P+ IG L  L  L L+++++  
Sbjct: 140 LQMLDLGNNQLTILPKE-IGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTI 198

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  + +N L+ LP E+G+L  L    L +NQL     E  +L+ L  L
Sbjct: 199 LPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHEL 258

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +N L+ LP EIG++  L++ +L  N    L   +  G    L               
Sbjct: 259 YLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEI--GQLQNL--------------- 301

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              +EL L    L+  P EI +  ++  L+L  N +  LP E+ 
Sbjct: 302 -------------------QELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIE 342

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+TL LS N++K  P  I   L +L  L L NN L  +P +  + +  LQ L+L  
Sbjct: 343 QLKNLKTLNLSENQLKTIPQEI-GQLQNLKLLDLSNNQLTTLPKE-IEQLKNLQTLNLWN 400

Query: 300 NIASLPENPPFSSL 313
           N  S  E      L
Sbjct: 401 NQFSSQEKEKIRKL 414



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 7/144 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +  ++ N+ T+L    I     L EL  S N L   P+ IG L +L  L+L  N++ +
Sbjct: 278 LQRFVLDNNQFTILPKE-IGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTT 336

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    +  N L  +P E+G+L  L  LDL +NQL     E  QL+ L  L
Sbjct: 337 LPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKLLDLSNNQLTTLPKEIEQLKNLQTL 396

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL 143
           +L NN  S    E      +RKLL
Sbjct: 397 NLWNNQFSSQEKE-----KIRKLL 415


>gi|449710204|gb|EMD49329.1| leucinerich repeat-containing protein [Entamoeba histolytica KU27]
          Length = 850

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 200/401 (49%), Gaps = 41/401 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
            +++++LT L    N +N  P+ I  L  L  LDL  N I SIP +I    +L+E  MG 
Sbjct: 46  FSNFSLLTLLRLRGNNINKFPDPILDLQSLKCLDLSNNHITSIPPNIVCLNNLSELIMGQ 105

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L++LP E+G ++ L  + L +N LKE  +E C L +L+ +DLSNN+    P  +GK++
Sbjct: 106 NNLTSLPKEIGIITTLVNITLPANNLKELPLEMCSLTKLTFVDLSNNNFDNFPQVLGKLS 165

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSV 196
            +R L +  N L  L+   + G     +K+L   +L  N+ ++      +L  + +    
Sbjct: 166 NIRTLWMFYNNLNKLKG--IEG-----IKHLNQLKLLHNKFTQIPKQIFNLTELCS---- 214

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
               L L+   +  IP EI E  ++ ++  +   IQ +P E+ S ++LQ L++ R+++ +
Sbjct: 215 ----LELDNNLIRKIPPEIKELKKLKEIAFTDCLIQRIPEEIVSLSNLQELVIVRSRVNE 270

Query: 257 WP---------------DAILTSLSSL---SCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +P               D+++T +S      C+ L+NN L ++     K  P   +  L+
Sbjct: 271 FPRFLRKMPKISNLIITDSLITEVSCTLNNCCIILENNKLTEI-----KCTPNDNVFTLN 325

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
                L + P  + L  + ELYL    +++     L    L+IL L+ N L S PE   +
Sbjct: 326 LCNNHLKKIPNTTDLQTIHELYLTNNFIQQIEQTELH-SNLKILTLASNKLTSFPEKGIS 384

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
              L EL+LS+N IS LP  L    P L+ L+L  N L +I
Sbjct: 385 YNKLKELNLSNNGISQLPNNLFTFLPYLKILKLGINQLTTI 425



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 191/425 (44%), Gaps = 39/425 (9%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N +T +  N++     L+ELI  +N L  +P+ IG ++ L+ + L  N +  +P 
Sbjct: 78  LDLSNNHITSIPPNIVC-LNNLSELIMGQNNLTSLPKEIGIITTLVNITLPANNLKELPL 136

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL---------------HSNQLKEYC 108
            +     L    + NN     P  LGKLS + TL +               H NQLK   
Sbjct: 137 EMCSLTKLTFVDLSNNNFDNFPQVLGKLSNIRTLWMFYNNLNKLKGIEGIKHLNQLKLLH 196

Query: 109 VEACQL--------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 160
            +  Q+         L  L+L NN +  +PPEI ++  L+++  T   ++ +   +V+  
Sbjct: 197 NKFTQIPKQIFNLTELCSLELDNNLIRKIPPEIKELKKLKEIAFTDCLIQRIPEEIVSLS 256

Query: 161 TPALLKYLRSRLPENEDSEASTTK-EDLI---TMATRLSVTSKELS--LEGMNLSAIPSE 214
               L  +RSR+ E         K  +LI   ++ T +S T       LE   L+ I  +
Sbjct: 257 NLQELVIVRSRVNEFPRFLRKMPKISNLIITDSLITEVSCTLNNCCIILENNKLTEI--K 314

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
                 +  L+L  N ++++P   +   ++  L L+ N I+      L S  +L  L L 
Sbjct: 315 CTPNDNVFTLNLCNNHLKKIP-NTTDLQTIHELYLTNNFIQQIEQTELHS--NLKILTLA 371

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
           +N L   P  G      L+ L+LS N I+ LP N  F+ LP+L+ L L   QL   PT +
Sbjct: 372 SNKLTSFPEKGI-SYNKLKELNLSNNGISQLPNNL-FTFLPYLKILKLGINQLTTIPTSL 429

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
             L QL  L+LS N L   P     LTSLT L L+ N I  LP  L  L  +LQ +    
Sbjct: 430 GILNQLEELNLSHNKLTEFPLNILKLTSLTNLYLTHNYICDLPKNLSQLN-NLQVVDFSS 488

Query: 394 NPLRS 398
           N + S
Sbjct: 489 NNIIS 493


>gi|260788682|ref|XP_002589378.1| hypothetical protein BRAFLDRAFT_77821 [Branchiostoma floridae]
 gi|229274555|gb|EEN45389.1| hypothetical protein BRAFLDRAFT_77821 [Branchiostoma floridae]
          Length = 1059

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 193/403 (47%), Gaps = 26/403 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD   N LT L    I+S   L +L    N L+ +P+ +  L +L  L +  N++  
Sbjct: 61  LYRLDAYSNMLTSLPQ-AISSLQGLKKLYVHSNNLSELPDGLEDLQKLEWLWVKDNKLTK 119

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I  C +L  F   NN LSA P  + KL KL  L ++ NQL E     C L  L  L
Sbjct: 120 LPTKIFSCLNLVNFDASNNKLSAFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEEL 179

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+SNN LS  PP + K+  LR+L +  N L  + S + + P   LL    ++L     S 
Sbjct: 180 DVSNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNNKL-----SA 234

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGM-----NLSAIPSEIWEAGEITKLDLSRNSIQEL 234
                E L  +        +EL + G+      LS  P  + +  ++ +L +  N + E+
Sbjct: 235 FPPGVEKLQKL--------RELYIYGVKCHNNKLSTFPPGVEKLQKLRELYIQDNQLTEV 286

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P  + S   L+ L +  NK+  +P  +   L  L  L +  N L +VPS     +P L++
Sbjct: 287 PSGVCSLPHLELLTVGNNKLSKFPPGV-EKLQKLRKLYIYGNQLTEVPS-SVCSLPNLEV 344

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           L +  N +++ P  P    L  L+ELY++  QL E P+ +  L  L +L +  N L + P
Sbjct: 345 LSVYNNKLSTFP--PGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLEVLSVYNNKLSTFP 402

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            G + L  L EL + DN ++ +P  +  L P L+ L +  N L
Sbjct: 403 PGVEKLQKLRELYIQDNQLTEVPSGVCSL-PHLELLTVGNNKL 444



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 186/405 (45%), Gaps = 28/405 (6%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           KLD+    LT +   +    T L  L  S N +  +PE I  L +L RLD + N + S+P
Sbjct: 17  KLDLSNQGLTSIPEEVF-DITDLEILDVSNNKIISIPEAICRLQKLYRLDAYSNMLTSLP 75

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLD 120
            +IS    L + Y+ +N LS LP  L  L KL  L +  N+L +    + +C L L   D
Sbjct: 76  QAISSLQGLKKLYVHSNNLSELPDGLEDLQKLEWLWVKDNKLTKLPTKIFSC-LNLVNFD 134

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
            SNN LS  PP + K+  LR+L + GN L  + S + +             LP  E+ + 
Sbjct: 135 ASNNKLSAFPPGVEKLQKLRELYIYGNQLTEVPSGVCS-------------LPNLEELDV 181

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
           S  K              +EL ++   L+ +PS +     +  L +  N +   PP +  
Sbjct: 182 SNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNNKLSAFPPGVEK 241

Query: 241 CASLQTLIL-----SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              L+ L +       NK+  +P  +   L  L  L + +N L +VPS G   +P L++L
Sbjct: 242 LQKLRELYIYGVKCHNNKLSTFPPGV-EKLQKLRELYIQDNQLTEVPS-GVCSLPHLELL 299

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            +  N ++  P  P    L  L++LY+   QL E P+ +  L  L +L +  N L + P 
Sbjct: 300 TVGNNKLSKFP--PGVEKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNKLSTFPP 357

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           G + L  L EL + DN ++ +P  +  L P L+ L +  N L + 
Sbjct: 358 GVEKLQKLRELYIQDNQLTEVPSGVCSL-PHLEVLSVYNNKLSTF 401



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 184/411 (44%), Gaps = 40/411 (9%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L+  P  +  L +L  L +  N++  +PS +     L    +GNN LS  P  + KL 
Sbjct: 258 NKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNNKLSKFPPGVEKLQ 317

Query: 93  KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
           KL  L ++ NQL E     C L  L VL + NN LS  PP + K+  LR+L +  N L  
Sbjct: 318 KLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRELYIQDNQLTE 377

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
           + S + + P   +L    ++L     S      E L  +        +EL ++   L+ +
Sbjct: 378 VPSGVCSLPHLEVLSVYNNKL-----STFPPGVEKLQKL--------RELYIQDNQLTEV 424

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           PS +     +  L +  N + + PP +     L+ L +  N++ + P ++  SL +L  L
Sbjct: 425 PSGVCSLPHLELLTVGNNKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSV-CSLPNLEVL 483

Query: 272 KLDNNPLR---------------QVPSDGFKDIP--MLQILDLSYNIASLPENPPFSSLP 314
            + NN L                 VP+  F + P  +LQ+  L    A       F  +P
Sbjct: 484 SVYNNKLSTFPPGVEKLQKLKSLSVPASQFDEFPRQVLQLKTLEELYAGQAGGRKFDIVP 543

Query: 315 -------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                  HL  L L    LR  P+ +  L  LR++ L  N   + PE    L ++ +LD+
Sbjct: 544 DEVGNLQHLWFLALENNLLRTLPSTMSHLHNLRVVQLWNNKFDTFPEVLCELPAMEKLDI 603

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
            +NNI+ LP  L   +  L+ L + GNPL    + + ++GT A++ +LK +
Sbjct: 604 RNNNITRLPTALHRAD-KLKDLDVSGNPLTYPPQDVCEQGTGAIMAFLKQE 653



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 129/306 (42%), Gaps = 37/306 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L ++ N+LT + +  + S   L  L    N L+  P  +  L +L  L +  N++  
Sbjct: 365 LRELYIQDNQLTEVPSG-VCSLPHLEVLSVYNNKLSTFPPGVEKLQKLRELYIQDNQLTE 423

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +PS +     L    +GNN LS  P  + KL KL  L ++ NQL E     C L  L VL
Sbjct: 424 VPSGVCSLPHLELLTVGNNKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVL 483

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            + NN LS  PP + K+  L+ L +               P     ++ R  L      +
Sbjct: 484 SVYNNKLSTFPPGVEKLQKLKSLSV---------------PASQFDEFPRQVL------Q 522

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             T +E     A             G     +P E+     +  L L  N ++ LP  +S
Sbjct: 523 LKTLEELYAGQAG------------GRKFDIVPDEVGNLQHLWFLALENNLLRTLPSTMS 570

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+ + L  NK   +P+ +L  L ++  L + NN + ++P+        L+ LD+S 
Sbjct: 571 HLHNLRVVQLWNNKFDTFPE-VLCELPAMEKLDIRNNNITRLPT-ALHRADKLKDLDVSG 628

Query: 300 NIASLP 305
           N  + P
Sbjct: 629 NPLTYP 634



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 37/223 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL + GN+LT + ++ + S   L  L    N L+  P  +  L +L  L +  ++   
Sbjct: 457 LRKLYIYGNQLTEVPSS-VCSLPNLEVLSVYNNKLSTFPPGVEKLQKLKSLSVPASQFDE 515

Query: 61  IPSSISGCCSLAEFYMG--------------------------NNALSALPAELGKLSKL 94
            P  +    +L E Y G                          NN L  LP+ +  L  L
Sbjct: 516 FPRQVLQLKTLEELYAGQAGGRKFDIVPDEVGNLQHLWFLALENNLLRTLPSTMSHLHNL 575

Query: 95  GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             + L +N+   +    C+L  +  LD+ NN+++ LP  + +   L+ L ++GNPL    
Sbjct: 576 RVVQLWNNKFDTFPEVLCELPAMEKLDIRNNNITRLPTALHRADKLKDLDVSGNPLTYPP 635

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             +    T A++ +L+         + S  +E ++    RLSV
Sbjct: 636 QDVCEQGTGAIMAFLK---------QESVKEERILRAFNRLSV 669


>gi|195061568|ref|XP_001996020.1| GH14049 [Drosophila grimshawi]
 gi|193891812|gb|EDV90678.1| GH14049 [Drosophila grimshawi]
          Length = 744

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 210/472 (44%), Gaps = 97/472 (20%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I++  ML  L A  N +N +P  IG L RL  L L  N I  +P+ I    SL +  +  
Sbjct: 299 ISNLHMLEFLDAGNNNINTVPGGIGFLVRLTALLLANNHIKELPTDIVNMRSLQKLDLMK 358

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKE--------------------------YCV--- 109
           N L ALP ++G + KL  L +  N +KE                           C    
Sbjct: 359 NDLIALPEDMGLMRKLECLYVQHNDIKELPTFEGNEMLSELHASNNFIESVPQDLCANLP 418

Query: 110 -----------------EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
                            E C +R L+ LDL+NNS+S LP  +  +  L  L + GNP++T
Sbjct: 419 HLKIFDLRDNKITQLPDEICLMRNLNRLDLTNNSISVLPVTLSSLAHLISLQVDGNPIKT 478

Query: 152 LRSSLVNGPTPALLKYLRSRLPE------NEDSEA------STTKEDLI-----TMATRL 194
           +R  ++   T  +LK L  R           D EA      ST  +  +      M  R 
Sbjct: 479 IRRDILQCGTARILKTLHDRAQAKIREEGGADEEAPCSSRSSTGSQGAMNNLPNNMTDRY 538

Query: 195 SV-TSKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNSIQELPPELSSCASLQT-LIL 249
            +  ++ L++   NL+ +P  +++   +  +  +D +RN +  LP  L   ++L T L+L
Sbjct: 539 KLRHTRTLAVNLENLTNVPEHVFQLASSENVHVVDFARNQLGSLPQGLQLMSNLVTELVL 598

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP 309
           + N I   P   +T  + ++ L L NN +R +P++                         
Sbjct: 599 AHNVIASVP-TFITQFTRITFLNLSNNQIRDLPNE------------------------- 632

Query: 310 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLS 368
           F  L  L+EL +   +    P  +  LQ L IL  S+N ++++  +G K +  L+ LDL 
Sbjct: 633 FGVLNTLRELNIANNRFEFLPKGLYELQGLEILIASENHIKALNVDGLKGMPRLSTLDLR 692

Query: 369 DNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           +N+I  +PP LG L  ++  L L GNP R  R  IL +GT A++ YL+D+IP
Sbjct: 693 NNDIEFIPPILGNLT-NITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRIP 743



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 182/422 (43%), Gaps = 85/422 (20%)

Query: 20  ASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           A W    +  L  S N L  +   I +L  L  L LH N ++S+P  I     L    + 
Sbjct: 206 AWWNQVPINNLDLSSNALTHISPKIENLLTLTVLQLHDNALVSLPPEIGKLEKLVRLNLS 265

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           +N LS LPAE   L +L  L++  N+  E   +   L  L  LD  NN+++ +P  IG +
Sbjct: 266 HNKLSELPAEFYSLPELRHLNISHNEFLELNPDISNLHMLEFLDAGNNNINTVPGGIGFL 325

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L  LLL  N ++ L + +VN         +RS        +    K DLI +   + +
Sbjct: 326 VRLTALLLANNHIKELPTDIVN---------MRSL------QKLDLMKNDLIALPEDMGL 370

Query: 197 TSK--ELSLEGMNLSAIPSEIWEAGEI-TKLDLSRNSIQELPPELSSCAS---LQTLILS 250
             K   L ++  ++  +P+  +E  E+ ++L  S N I+ +P +L  CA+   L+   L 
Sbjct: 371 MRKLECLYVQHNDIKELPT--FEGNEMLSELHASNNFIESVPQDL--CANLPHLKIFDLR 426

Query: 251 RNKIKDWPDAI----------------------LTSLSSLSCLKLDNNPLRQVPSDGFKD 288
            NKI   PD I                      L+SL+ L  L++D NP++ +  D  + 
Sbjct: 427 DNKITQLPDEICLMRNLNRLDLTNNSISVLPVTLSSLAHLISLQVDGNPIKTIRRDILQ- 485

Query: 289 IPMLQILDLSYNIASLP--------ENPPFSS----------------------LPHLQE 318
               +IL   ++ A           E  P SS                      L H + 
Sbjct: 486 CGTARILKTLHDRAQAKIREEGGADEEAPCSSRSSTGSQGAMNNLPNNMTDRYKLRHTRT 545

Query: 319 LYLRRMQLREAPTDILRL---QQLRILDLSQNSLQSIPEGFKNLTSL-TELDLSDNNISA 374
           L +    L   P  + +L   + + ++D ++N L S+P+G + +++L TEL L+ N I++
Sbjct: 546 LAVNLENLTNVPEHVFQLASSENVHVVDFARNQLGSLPQGLQLMSNLVTELVLAHNVIAS 605

Query: 375 LP 376
           +P
Sbjct: 606 VP 607



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 27/181 (14%)

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
           W    I  LDLS N++  + P++ +  +L  L L  N +   P  I   L  L  L L +
Sbjct: 208 WNQVPINNLDLSSNALTHISPKIENLLTLTVLQLHDNALVSLPPEI-GKLEKLVRLNLSH 266

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
           N L ++P++                         F SLP L+ L +   +  E   DI  
Sbjct: 267 NKLSELPAE-------------------------FYSLPELRHLNISHNEFLELNPDISN 301

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L  L  LD   N++ ++P G   L  LT L L++N+I  LP ++  +  SLQ L L  N 
Sbjct: 302 LHMLEFLDAGNNNINTVPGGIGFLVRLTALLLANNHIKELPTDIVNMR-SLQKLDLMKND 360

Query: 396 L 396
           L
Sbjct: 361 L 361


>gi|428163352|gb|EKX32427.1| hypothetical protein GUITHDRAFT_121393 [Guillardia theta CCMP2712]
          Length = 1894

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 208/457 (45%), Gaps = 59/457 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRIL 59
           ++++ + GNKLT +   + A    L  L  S N L  +PET+   L+ +  L L  N + 
Sbjct: 92  LTEIRLSGNKLTSVPATVFAGLASLQYLYLSSNKLTSIPETVFAGLASIRVLILSGNELT 151

Query: 60  SIPSSI-SGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEY---------- 107
           S+P ++ +G  SL   Y+ NN L+++PA     L+ L TL L SN+L             
Sbjct: 152 SVPETVFAGLASLQYLYLDNNKLTSVPATVFNGLASLQTLYLSSNKLTSVPETVFNGLAS 211

Query: 108 ----------------CVEACQLRLSVLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLR 150
                            V A    L  L L +N L+ +P  +   + +L+ L L+ N L 
Sbjct: 212 LRSLYLDNNELTSVPETVFAGLASLQTLYLYDNELTSIPATVFAGLASLQTLYLSYNKLT 271

Query: 151 TLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELS------- 202
           ++  ++ +G     L  LRS  L  NE +    T  D +     L ++S +L+       
Sbjct: 272 SVPETVFDG-----LASLRSLYLSYNELTSVPETVFDGLASLQYLYLSSNKLTSVPATVF 326

Query: 203 ----------LEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPE-LSSCASLQTLILS 250
                     L G  L+++P  ++     +  L LS N +  +P    +  ASLQTL LS
Sbjct: 327 AGLTSLQTLYLSGNELTSVPETVFTGLASLQTLYLSSNKLTSVPETVFNGLASLQTLYLS 386

Query: 251 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPP 309
            NK+   P  +   L+SL  L L +N L  +P+  F  +  LQ L LS N + S+PE   
Sbjct: 387 SNKLTSVPATVFAGLASLQYLYLYDNELTSIPATVFAGLTSLQSLYLSSNKLTSVPET-V 445

Query: 310 FSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIPE-GFKNLTSLTELDL 367
           F  L  LQ LYL   +L   P  +   L  L+ L L  N L SIP  GF  L SL  L L
Sbjct: 446 FDGLASLQTLYLSSNKLTSVPATVFNGLASLQTLYLYDNELTSIPATGFNGLASLQTLYL 505

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
           S N ++++P  +     SLQ L L GN L S+  T+ 
Sbjct: 506 SSNELTSIPETVFAGLASLQTLYLSGNELTSVPETVF 542



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 133/428 (31%), Positives = 203/428 (47%), Gaps = 25/428 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRIL 59
           +  L +  NKLT +   +      L  L    N L  +PET+   L+ L  L L+ N + 
Sbjct: 188 LQTLYLSSNKLTSVPETVFNGLASLRSLYLDNNELTSVPETVFAGLASLQTLYLYDNELT 247

Query: 60  SIPSSI-SGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--CVEACQLR 115
           SIP+++ +G  SL   Y+  N L+++P      L+ L +L L  N+L      V      
Sbjct: 248 SIPATVFAGLASLQTLYLSYNKLTSVPETVFDGLASLRSLYLSYNELTSVPETVFDGLAS 307

Query: 116 LSVLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR--- 171
           L  L LS+N L+ +P  +   +T+L+ L L+GN L ++  ++  G       YL S    
Sbjct: 308 LQYLYLSSNKLTSVPATVFAGLTSLQTLYLSGNELTSVPETVFTGLASLQTLYLSSNKLT 367

Query: 172 -LPENEDSEASTTKEDLITMATRLSVTS---------KELSLEGMNLSAIPSEIWEA-GE 220
            +PE   +  ++ +   ++     SV +         + L L    L++IP+ ++     
Sbjct: 368 SVPETVFNGLASLQTLYLSSNKLTSVPATVFAGLASLQYLYLYDNELTSIPATVFAGLTS 427

Query: 221 ITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
           +  L LS N +  +P       ASLQTL LS NK+   P  +   L+SL  L L +N L 
Sbjct: 428 LQSLYLSSNKLTSVPETVFDGLASLQTLYLSSNKLTSVPATVFNGLASLQTLYLYDNELT 487

Query: 280 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQ 337
            +P+ GF  +  LQ L LS N + S+PE   F+ L  LQ LYL   +L   P  +   L 
Sbjct: 488 SIPATGFNGLASLQTLYLSSNELTSIPET-VFAGLASLQTLYLSGNELTSVPETVFAGLA 546

Query: 338 QLRILDLSQNSLQSIPEG-FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L+ L LS N L S+PE  F  L SL  L LS N ++++P  +     SLQ L L  N L
Sbjct: 547 SLQTLYLSGNELTSVPETVFAGLASLQTLYLSSNELTSIPETVFAGLASLQYLYLSSNKL 606

Query: 397 RSIRRTIL 404
            S+  T+ 
Sbjct: 607 TSVPETVF 614



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 131/416 (31%), Positives = 199/416 (47%), Gaps = 23/416 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRIL 59
           +  L +  N+LT +   + A    L  L  S N L  +PET+   L+ L  L L  N + 
Sbjct: 236 LQTLYLYDNELTSIPATVFAGLASLQTLYLSYNKLTSVPETVFDGLASLRSLYLSYNELT 295

Query: 60  SIPSSI-SGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEY--CVEACQLR 115
           S+P ++  G  SL   Y+ +N L+++PA     L+ L TL L  N+L      V      
Sbjct: 296 SVPETVFDGLASLQYLYLSSNKLTSVPATVFAGLTSLQTLYLSGNELTSVPETVFTGLAS 355

Query: 116 LSVLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           L  L LS+N L+ +P  +   + +L+ L L+ N L ++ +++  G   A L+YL      
Sbjct: 356 LQTLYLSSNKLTSVPETVFNGLASLQTLYLSSNKLTSVPATVFAGL--ASLQYLYLY--- 410

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQE 233
             D+E ++    +    T L    + L L    L+++P  +++    +  L LS N +  
Sbjct: 411 --DNELTSIPATVFAGLTSL----QSLYLSSNKLTSVPETVFDGLASLQTLYLSSNKLTS 464

Query: 234 LPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
           +P    +  ASLQTL L  N++   P      L+SL  L L +N L  +P   F  +  L
Sbjct: 465 VPATVFNGLASLQTLYLYDNELTSIPATGFNGLASLQTLYLSSNELTSIPETVFAGLASL 524

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQ 350
           Q L LS N + S+PE   F+ L  LQ LYL   +L   P  +   L  L+ L LS N L 
Sbjct: 525 QTLYLSGNELTSVPETV-FAGLASLQTLYLSGNELTSVPETVFAGLASLQTLYLSSNELT 583

Query: 351 SIPEG-FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
           SIPE  F  L SL  L LS N ++++P  +     SLQ L L  N L S+  T+ +
Sbjct: 584 SIPETVFAGLASLQYLYLSSNKLTSVPETVFAGLASLQTLYLSYNELTSVPETVFN 639



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 181/368 (49%), Gaps = 22/368 (5%)

Query: 48  LIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLK 105
           L  + L  N++ S+P+++ +G  SL   Y+ +N L+++P      L+ +  L L  N+L 
Sbjct: 92  LTEIRLSGNKLTSVPATVFAGLASLQYLYLSSNKLTSIPETVFAGLASIRVLILSGNELT 151

Query: 106 EY--CVEACQLRLSVLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTP 162
                V A    L  L L NN L+ +P  +   + +L+ L L+ N L ++  ++ NG   
Sbjct: 152 SVPETVFAGLASLQYLYLDNNKLTSVPATVFNGLASLQTLYLSSNKLTSVPETVFNG--- 208

Query: 163 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEI 221
             L  LRS   +N  +E ++  E +      L    + L L    L++IP+ ++     +
Sbjct: 209 --LASLRSLYLDN--NELTSVPETVFAGLASL----QTLYLYDNELTSIPATVFAGLASL 260

Query: 222 TKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
             L LS N +  +P       ASL++L LS N++   P+ +   L+SL  L L +N L  
Sbjct: 261 QTLYLSYNKLTSVPETVFDGLASLRSLYLSYNELTSVPETVFDGLASLQYLYLSSNKLTS 320

Query: 281 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQ 338
           VP+  F  +  LQ L LS N + S+PE   F+ L  LQ LYL   +L   P  +   L  
Sbjct: 321 VPATVFAGLTSLQTLYLSGNELTSVPETV-FTGLASLQTLYLSSNKLTSVPETVFNGLAS 379

Query: 339 LRILDLSQNSLQSIPEG-FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
           L+ L LS N L S+P   F  L SL  L L DN ++++P  +     SLQ+L L  N L 
Sbjct: 380 LQTLYLSSNKLTSVPATVFAGLASLQYLYLYDNELTSIPATVFAGLTSLQSLYLSSNKLT 439

Query: 398 SIRRTILD 405
           S+  T+ D
Sbjct: 440 SVPETVFD 447



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 172/362 (47%), Gaps = 22/362 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRIL 59
           +  L + GN+LT +   + A    L  L  S N L  +PET+   L+ L  L L  N + 
Sbjct: 524 LQTLYLSGNELTSVPETVFAGLASLQTLYLSGNELTSVPETVFAGLASLQTLYLSSNELT 583

Query: 60  SIPSSI-SGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--CVEACQLR 115
           SIP ++ +G  SL   Y+ +N L+++P      L+ L TL L  N+L      V      
Sbjct: 584 SIPETVFAGLASLQYLYLSSNKLTSVPETVFAGLASLQTLYLSYNELTSVPETVFNGLAS 643

Query: 116 LSVLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           L  L LS N L+ +P  +   + +LR L L  N L ++ +++  G     L  LRS    
Sbjct: 644 LQTLYLSYNKLTSVPATVFAGLASLRSLGLYDNKLTSVPATVFAG-----LASLRSL--S 696

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQE 233
            + +E ++  E +    T L    + L L    L+++P  ++     +  L L  N +  
Sbjct: 697 LDFNELTSIPETVFAGLTSL----QTLYLYDNELTSVPETVFNGLASLQYLYLDNNKLTS 752

Query: 234 LPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
           +P    +  AS+QTL LS N++   P+ +   L+SL  L + +N L  VP   F  +  L
Sbjct: 753 IPETVFAGLASVQTLYLSGNELTSVPETVFNGLASLQYLNVSSNELTSVPETVFDGLASL 812

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQ 350
           Q LDLSYN + S+PE   F+ L  L+ LYL   +L   P  +   L  L  LDL  N L 
Sbjct: 813 QTLDLSYNKLTSVPET-VFAGLASLRSLYLDNNELTSVPETVFAGLDSLWRLDLHSNRLA 871

Query: 351 SI 352
           S+
Sbjct: 872 SL 873



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 202/455 (44%), Gaps = 72/455 (15%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM-PETIGSLSRLIRLDLHQNRIL 59
            +  L +  N+L  +S+++ A  + LT L    N L+ + P     L+RL  L +H NR+ 
Sbjct: 908  LEALYLHSNQLADISSDVFAQLSSLTTLTLHNNRLSSLSPGAFAGLARLTTLSIHHNRLT 967

Query: 60   SI-PSSISGCCSLAEFYMGNNALSALPA-ELGKLSKLGTLDLHSNQLKEYCVEACQ---- 113
             + P +  G  +LA   + +N L++L A  L  L  +  LDL SN+L +   +A      
Sbjct: 968  RLSPGAFQGLSTLATLDLHDNHLTSLTAGALTGLDAMRALDLSSNKLADLPAQALHNLTG 1027

Query: 114  LR----------------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
            LR                      L  L LS+N L+ +P  +G + +LR LLL  NPL +
Sbjct: 1028 LRNLSLDDNQLTSLSAGVLEPLAGLEYLWLSHNRLAEVPAGLGSLASLRYLLLDHNPLTS 1087

Query: 152  LRSSLV-NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
            L  SL+ N P       LR+ L  N D+  + + +    + T L                
Sbjct: 1088 LDVSLLDNKPD------LRA-LGVNSDAFKALSAQRPSVLETLL---------------- 1124

Query: 211  IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
               E+W     +  D  +++  EL  +LS    L      ++ I      +L+SLSS+  
Sbjct: 1125 ---ELWLCK--SDDDQDQSAAGELLDKLSQLTGLYLFGFDQSLIHA---GMLSSLSSVRV 1176

Query: 271  LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 330
            L L++N L Q+P   F  +P LQ L L +N  +       S+L  L EL++    +   P
Sbjct: 1177 LWLEDNLLDQLPPGTFDQLPSLQSLYLIHNGLTAVPVAALSNLSGLTELHIVNDGITRVP 1236

Query: 331  TDILR-LQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALP-PEL-GLLEPSL 386
                R L  LR LDLS N + SI  E F NL ++ +LDLS+N +  L   EL GL     
Sbjct: 1237 AGAFRSLSGLRTLDLSGNLISSIEAEAFDNLDNVRQLDLSNNRLVMLDVAELRGLGNSDW 1296

Query: 387  QALRLDGNPLRSIR-------RTILDRGTKAVLKY 414
             ++ L  NP+  I        R I   G+  +L Y
Sbjct: 1297 MSIYLYDNPIAYISVQNNFSPRIIYILGSHKLLCY 1331



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 115/221 (52%), Gaps = 8/221 (3%)

Query: 200 ELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDW 257
           E+ L G  L+++P+ ++     +  L LS N +  +P    +  AS++ LILS N++   
Sbjct: 94  EIRLSGNKLTSVPATVFAGLASLQYLYLSSNKLTSIPETVFAGLASIRVLILSGNELTSV 153

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P+ +   L+SL  L LDNN L  VP+  F  +  LQ L LS N + S+PE   F+ L  L
Sbjct: 154 PETVFAGLASLQYLYLDNNKLTSVPATVFNGLASLQTLYLSSNKLTSVPET-VFNGLASL 212

Query: 317 QELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIPEG-FKNLTSLTELDLSDNNISA 374
           + LYL   +L   P  +   L  L+ L L  N L SIP   F  L SL  L LS N +++
Sbjct: 213 RSLYLDNNELTSVPETVFAGLASLQTLYLYDNELTSIPATVFAGLASLQTLYLSYNKLTS 272

Query: 375 LPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           +P  +     SL++L L  N L S+  T+ D    A L+YL
Sbjct: 273 VPETVFDGLASLRSLYLSYNELTSVPETVFDG--LASLQYL 311



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 200/480 (41%), Gaps = 80/480 (16%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRIL 59
            +  L +  N+LT +   +      L  L  S N L  +P T+   L+ L  L L+ N++ 
Sbjct: 620  LQTLYLSYNELTSVPETVFNGLASLQTLYLSYNKLTSVPATVFAGLASLRSLGLYDNKLT 679

Query: 60   SIPSSI-SGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--CVEACQLR 115
            S+P+++ +G  SL    +  N L+++P      L+ L TL L+ N+L      V      
Sbjct: 680  SVPATVFAGLASLRSLSLDFNELTSIPETVFAGLTSLQTLYLYDNELTSVPETVFNGLAS 739

Query: 116  LSVLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR----- 169
            L  L L NN L+ +P  +   + +++ L L+GN L ++  ++ NG   A L+YL      
Sbjct: 740  LQYLYLDNNKLTSIPETVFAGLASVQTLYLSGNELTSVPETVFNGL--ASLQYLNVSSNE 797

Query: 170  -SRLPENE-DSEASTTKEDLI---------TMATRLSVTSKELSLEGMNLSAIPSEIWEA 218
             + +PE   D  AS    DL          T+   L+ + + L L+   L+++P  ++  
Sbjct: 798  LTSVPETVFDGLASLQTLDLSYNKLTSVPETVFAGLA-SLRSLYLDNNELTSVPETVFAG 856

Query: 219  -GEITKLDLSRNSIQELPPEL-------------------------SSCASLQTLILSRN 252
               + +LDL  N +  L   L                             SL+ L L  N
Sbjct: 857  LDSLWRLDLHSNRLASLALSLFYDCHDLMELYLNNNLLSGLLPGSLDGLVSLEALYLHSN 916

Query: 253  KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSS 312
            ++ D    +   LSSL+ L L NN L  +    F  +  L  L + +N  +      F  
Sbjct: 917  QLADISSDVFAQLSSLTTLTLHNNRLSSLSPGAFAGLARLTTLSIHHNRLTRLSPGAFQG 976

Query: 313  LPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP-EGFKNLTSLTELDLSDN 370
            L  L  L L    L       L  L  +R LDLS N L  +P +   NLT L  L L DN
Sbjct: 977  LSTLATLDLHDNHLTSLTAGALTGLDAMRALDLSSNKLADLPAQALHNLTGLRNLSLDDN 1036

Query: 371  NISALPPELGLLEP-------------------------SLQALRLDGNPLRSIRRTILD 405
             +++L    G+LEP                         SL+ L LD NPL S+  ++LD
Sbjct: 1037 QLTSLSA--GVLEPLAGLEYLWLSHNRLAEVPAGLGSLASLRYLLLDHNPLTSLDVSLLD 1094



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 194/478 (40%), Gaps = 97/478 (20%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRIL 59
            +  LD+  NKLT +   + A    L  L    N L  +PET+   L  L RLDLH NR+ 
Sbjct: 812  LQTLDLSYNKLTSVPETVFAGLASLRSLYLDNNELTSVPETVFAGLDSLWRLDLHSNRLA 871

Query: 60   SIPSSI-------------------------SGCCSLAEFYMGNNALSALPAE-LGKLSK 93
            S+  S+                          G  SL   Y+ +N L+ + ++   +LS 
Sbjct: 872  SLALSLFYDCHDLMELYLNNNLLSGLLPGSLDGLVSLEALYLHSNQLADISSDVFAQLSS 931

Query: 94   LGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPP-EIGKMTTLRKLLLTGNPLR 150
            L TL LH+N+L        A   RL+ L + +N L+ L P     ++TL  L L  N L 
Sbjct: 932  LTTLTLHNNRLSSLSPGAFAGLARLTTLSIHHNRLTRLSPGAFQGLSTLATLDLHDNHLT 991

Query: 151  TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-EDLITMATRLSVTSKELSLEGMNLS 209
            +L +  + G     L  +R+        + S+ K  DL   A       + LSL+   L+
Sbjct: 992  SLTAGALTG-----LDAMRAL-------DLSSNKLADLPAQALHNLTGLRNLSLDDNQLT 1039

Query: 210  AIPSEIWE--AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
            ++ + + E  AG +  L LS N + E+P  L S ASL+ L+L  N            L+S
Sbjct: 1040 SLSAGVLEPLAG-LEYLWLSHNRLAEVPAGLGSLASLRYLLLDHNP-----------LTS 1087

Query: 268  LSCLKLDNNP-LRQ--VPSDGFK-----------------------------------DI 289
            L    LDN P LR   V SD FK                                    +
Sbjct: 1088 LDVSLLDNKPDLRALGVNSDAFKALSAQRPSVLETLLELWLCKSDDDQDQSAAGELLDKL 1147

Query: 290  PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDIL-RLQQLRILDLSQNS 348
              L  L L     SL      SSL  ++ L+L    L + P     +L  L+ L L  N 
Sbjct: 1148 SQLTGLYLFGFDQSLIHAGMLSSLSSVRVLWLEDNLLDQLPPGTFDQLPSLQSLYLIHNG 1207

Query: 349  LQSIP-EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
            L ++P     NL+ LTEL + ++ I+ +P         L+ L L GN + SI     D
Sbjct: 1208 LTAVPVAALSNLSGLTELHIVNDGITRVPAGAFRSLSGLRTLDLSGNLISSIEAEAFD 1265



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 342 LDLSQNSLQSIPEG-FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIR 400
           +DLS   ++ I EG F N  SLTE+ LS N ++++P  +     SLQ L L  N L SI 
Sbjct: 71  VDLSYAGIRRIDEGVFNNTWSLTEIRLSGNKLTSVPATVFAGLASLQYLYLSSNKLTSIP 130

Query: 401 RTIL 404
            T+ 
Sbjct: 131 ETVF 134


>gi|456982914|gb|EMG19366.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 432

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 132/394 (33%), Positives = 197/394 (50%), Gaps = 20/394 (5%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           LI S+  L  +P+ I  L  L  LDL  N++ ++P  I    +L E  +  N+L+ LP E
Sbjct: 53  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 146
           +G+L  L  L+L+S +L     E  QLR L  LDLS NSL+ LP E+G++  L++L L  
Sbjct: 113 VGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQ 172

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
           N L TL         P  +  L++    + +S   TT    I     L    +EL L   
Sbjct: 173 NRLATL---------PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNL----QELDLHRN 219

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            L+ +P EI +   +  L+L    +  LP E+    +L+TL L  N++   P  I   L 
Sbjct: 220 QLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI-GELQ 278

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
           +L  L L  N +  +P +    +  LQ LDL  N + +LP+      L +LQEL L   Q
Sbjct: 279 NLEILVLRENRITALPKE-IGQLQNLQRLDLHQNQLTTLPK--EIGQLQNLQELCLDENQ 335

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L   P +I +LQ LR+LDL  N L ++P+    L +L EL L +N ++  P E+  L+ +
Sbjct: 336 LTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLK-N 394

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           LQ L L  NPL S  +   +   + V   LK+ I
Sbjct: 395 LQELHLYLNPLSSKEKKGFEDYFQNVKFILKNII 428



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 122/361 (33%), Positives = 179/361 (49%), Gaps = 27/361 (7%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+LT L    I     L EL  S N L  +P+ +G L  L RL+L+  ++ ++P 
Sbjct: 76  LDLGHNQLTALPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPK 134

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  +  N+L+ LP E+G+L  L  LDLH N+L    +E  QL+ L  LDL+
Sbjct: 135 EIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLN 194

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPENEDSE 179
           +N L+ LP EI ++  L++L L  N L TL      L N  T  L+    + LP+ E  E
Sbjct: 195 SNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPK-EIGE 253

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              K L+L    L+ +P EI E   +  L L  N I  LP E+ 
Sbjct: 254 LQNL---------------KTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIG 298

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +LQ L L +N++   P  I   L +L  L LD N L  +P +  + +  L++LDL  
Sbjct: 299 QLQNLQRLDLHQNQLTTLPKEI-GQLQNLQELCLDENQLTTLPKE-IEQLQNLRVLDLDN 356

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFK 357
           N + +LP+      L +LQEL L   QL   P +I +L+ L+ L L  N L S   +GF+
Sbjct: 357 NQLTTLPK--EIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSSKEKKGFE 414

Query: 358 N 358
           +
Sbjct: 415 D 415



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 105/197 (53%), Gaps = 5/197 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L    L+ +P EI +   +  LDL  N +  LP E+    +LQ L
Sbjct: 40  LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQEL 99

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            LS N +   P  +   L +L  L L++  L  +P +    +  LQ LDLS+N + +LP+
Sbjct: 100 DLSFNSLTTLPKEV-GQLENLQRLNLNSQKLTTLPKE-IGQLRNLQELDLSFNSLTTLPK 157

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +LQ L L + +L   P +I +L+ L+ LDL+ N L ++P+  + L +L ELD
Sbjct: 158 --EVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELD 215

Query: 367 LSDNNISALPPELGLLE 383
           L  N ++ LP E+G L+
Sbjct: 216 LHRNQLTTLPKEIGQLQ 232


>gi|45656720|ref|YP_000806.1| hypothetical protein LIC10829 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084297|ref|ZP_15545160.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102948|ref|ZP_15563550.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599956|gb|AAS69443.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367263|gb|EKP22649.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433197|gb|EKP77545.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 402

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 128/383 (33%), Positives = 191/383 (49%), Gaps = 24/383 (6%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL  +KN L  +P+ IG L  L +L+L  N+I +IP  I     L   Y+ NN L+ L
Sbjct: 4   LQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTL 63

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P E+G+L KL  L L  NQL     E  QL+ L  L+LS N +  +P EI K+  L+ L 
Sbjct: 64  PQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLG 123

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KEL 201
           L  N L TL   +              +L   +  + ST +  L T+   +      + L
Sbjct: 124 LDNNQLTTLPQEI-------------GQLQNLQSLDLSTNR--LTTLPQEIGQLQNLQSL 168

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
            L    L+ +P EI     + +L L  N +  LP E+    +LQTL L  N++      I
Sbjct: 169 DLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 228

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 320
              L +L  L L +N L   P +    +  LQ+LDL  N + +LPE      L +LQ L 
Sbjct: 229 -EQLQNLKSLDLRSNQLTIFPKE-IGQLKNLQVLDLGSNQLTTLPEG--IGQLKNLQTLD 284

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L   QL   P +I +L+ L++LDLS N L+++P+  + L +L  L L  N ++ LP E+G
Sbjct: 285 LDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYLGYNQLTVLPKEIG 344

Query: 381 LLEPSLQALRLDGNPLRSIRRTI 403
            L+ +L+ L L+ N L ++ + I
Sbjct: 345 QLQ-NLKVLFLNNNQLTTLPKEI 366



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 144/307 (46%), Gaps = 40/307 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L ++ N+LT L    I     L  L  S N L  +P+ IG L  L  LDL  NR+ +
Sbjct: 119 LQSLGLDNNQLTTLPQE-IGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTT 177

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+ +N L+ LP E+G+L  L TL+L +N+L     E  QL+ L  L
Sbjct: 178 LPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 237

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL +N L+  P EIG++  L+ L L  N L TL   +        LK L++         
Sbjct: 238 DLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGI------GQLKNLQT--------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                L L+   L+ +P EI +   +  LDLS N ++ LP E+ 
Sbjct: 283 ---------------------LDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIE 321

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +LQTL L  N++   P  I   L +L  L L+NN L  +P +    +  LQ L L+ 
Sbjct: 322 QLKNLQTLYLGYNQLTVLPKEI-GQLQNLKVLFLNNNQLTTLPKE-IGQLKNLQELYLNN 379

Query: 300 NIASLPE 306
           N  S+ E
Sbjct: 380 NQLSIEE 386



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           + +LQEL L + QL   P +I +L+ LR L+LS N +++IP+  + L  L  L L +N +
Sbjct: 1   MKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQL 60

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           + LP E+G L+  LQ L L  N L ++ + I
Sbjct: 61  TTLPQEIGQLQ-KLQWLYLPKNQLTTLPQEI 90


>gi|418730499|ref|ZP_13288993.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774708|gb|EKR54712.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 631

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 138/402 (34%), Positives = 198/402 (49%), Gaps = 21/402 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G   T L    I     L EL    N L   P  I  L +L  LDL +NR++ +P+
Sbjct: 53  LNLSGQNFTTLPKE-IEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPN 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  +  N L   P E+G+L  L TL+L  NQL    VE  QL+ L  L+L 
Sbjct: 112 EIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLR 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++  L+ L L  N L TL   +        L+ L++ L  +E+   + 
Sbjct: 172 KNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEI------GQLQNLQT-LGLSENQLTTF 224

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
            KE  I     L    +EL+L+   L+A+P EI +   +  L+LS N +   P E+    
Sbjct: 225 PKE--IGQLENL----QELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLK 278

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
            LQ L L RN++  +P  I   L +L  L L  N  + V S     +  L  L+LSYN +
Sbjct: 279 KLQDLGLGRNQLTTFPKEI-GQLKNLQMLDLCYNQFKTV-SKEIGQLKNLLQLNLSYNQL 336

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
           A+LP       L  LQ+L L R QL   P +I +L+ L  LDL  N L ++P+    L +
Sbjct: 337 ATLP--AEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKN 394

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L  L L  N ++  P E+G LE +LQ L L  N L ++ + I
Sbjct: 395 LYNLGLGRNQLTTFPKEIGQLE-NLQELDLWNNRLTALPKEI 435



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 190/400 (47%), Gaps = 25/400 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L N  I     L EL   KN L   P+ IG L  L  L+L  N++ +
Sbjct: 96  LESLDLSENRLVMLPNE-IGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLAT 154

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L +  +  N L+ LP E+G+L  L TL+L  NQL    VE  QL+ L  L
Sbjct: 155 LPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTL 214

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LS N L+  P EIG++  L++L L  N L  L   +              +L   E+ E
Sbjct: 215 GLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEI-------------GQLKNLENLE 261

Query: 180 ASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
            S  +  L T    +    K  +L L    L+  P EI +   +  LDL  N  + +  E
Sbjct: 262 LSENQ--LTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKE 319

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           +    +L  L LS N++   P A +  L  L  L L  N L  +P +    +  L  LDL
Sbjct: 320 IGQLKNLLQLNLSYNQLATLP-AEIGQLKKLQDLSLGRNQLTTLPKE-IGQLKNLYNLDL 377

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
             N + +LP+      L +L  L L R QL   P +I +L+ L+ LDL  N L ++P+  
Sbjct: 378 GTNQLTTLPK--EIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEI 435

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
             L +L  L+LS+N ++  P E+G L+  LQ L L  N L
Sbjct: 436 GQLKNLENLELSENQLTTFPKEIGQLK-KLQDLGLSYNRL 474



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 169/381 (44%), Gaps = 41/381 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++  N+LT      I     L +L   +N L   P+ IG L  L  LDL  N+  +
Sbjct: 257 LENLELSENQLTTFPKE-IGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKT 315

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +   I    +L +  +  N L+ LPAE+G+L KL  L L  NQL     E  QL+ L  L
Sbjct: 316 VSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNL 375

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL  N L+ LP EIG++  L  L L  N L T          P  +  L           
Sbjct: 376 DLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTF---------PKEIGQL----------- 415

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E+L           +EL L    L+A+P EI +   +  L+LS N +   P E+ 
Sbjct: 416 -----ENL-----------QELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIG 459

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L LS N++   P  I   L  L  L L  N L  +P +    +  LQ+LDL Y
Sbjct: 460 QLKKLQDLGLSYNRLVILPKEI-GQLEKLQDLGLSYNRLVILPKE-IGQLKNLQMLDLCY 517

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           N      +     L +L +L L   QL   P +I +L+ L  LDL  N L ++P+    L
Sbjct: 518 NQFK-TVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQL 576

Query: 360 TSLTELDLSDNNISALPPELG 380
            +L  L L  N ++ LP E+G
Sbjct: 577 KNLYNLGLGTNQLTTLPKEIG 597



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 117/228 (51%), Gaps = 7/228 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
           D E   T  DL T A +  +  + L+L G N + +P EI +   + +LDL  N +   P 
Sbjct: 30  DEEEPGTYMDL-TKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPA 88

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
            +     L++L LS N++   P+ I   L +L  L L  N L   P +    +  LQ L+
Sbjct: 89  VIVELQKLESLDLSENRLVMLPNEI-GRLQNLQELGLYKNKLITFPKE-IGQLRNLQTLN 146

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N +A+LP       L +L++L LR+ +L   P +I +LQ L+ L+L  N L ++P  
Sbjct: 147 LQDNQLATLP--VEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVE 204

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L +L  L LS+N ++  P E+G LE +LQ L L  N L ++ + I
Sbjct: 205 IGQLQNLQTLGLSENQLTTFPKEIGQLE-NLQELNLKWNRLTALPKEI 251



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 2/150 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  N+L +L    I     L +L  S N L  +P+ IG L  L  LDL  N+  +
Sbjct: 464 LQDLGLSYNRLVILPKE-IGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKT 522

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +   I    +L +  +  N L+ LPAE+G+L  L  LDL +NQL     E  QL+ L  L
Sbjct: 523 VSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNL 582

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
            L  N L+ LP EIG++  L+ LLL+ NP+
Sbjct: 583 GLGTNQLTTLPKEIGQLKKLQWLLLSVNPI 612


>gi|422002277|ref|ZP_16349515.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259209|gb|EKT88588.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 533

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 201/397 (50%), Gaps = 17/397 (4%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I +   L  L  S+N L  +P+ IG+L  L  LDL++N++ ++PS I    SL   ++ +
Sbjct: 80  IETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEH 139

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP E+G L  L  L+L +NQL+    E   L+ L  L + NN L  LP EIGK+ 
Sbjct: 140 NQLITLPQEIGTLQDLEELNLANNQLRILSKEIGTLQHLQDLSVFNNQLITLPQEIGKLQ 199

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPENEDS-----EASTTKEDLIT 189
            L+ L L  N L TL   +        L    ++   LP+   +       +     L+T
Sbjct: 200 NLKYLRLAYNQLTTLPKEIGRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLVT 259

Query: 190 MATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +   +    K   L L    L+ +P EI +  ++  L L+ N ++ LP E+    +L+ L
Sbjct: 260 LPKEIGTLQKLEWLYLTNNQLATLPQEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKEL 319

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
           IL  N+++ +P  I T LS+L  L L+ N    +P +    +  L  L+L +N + +LP+
Sbjct: 320 ILENNRLESFPKEIGT-LSNLQRLHLEYNRFTTLPEE-IGTLHRLPWLNLEHNQLTTLPQ 377

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L  L+ L L   +L   P +I  L++L+ L L+ N L ++P+    L +L +LD
Sbjct: 378 --EIGRLERLEWLNLYNNRLATLPKEIGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLD 435

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           LSDN +  LP E+G L+  L+ L L  N LR++ + I
Sbjct: 436 LSDNQLVTLPEEIGTLQ-RLEWLSLKNNQLRTLSQEI 471



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 126/387 (32%), Positives = 183/387 (47%), Gaps = 27/387 (6%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L   P  IG+L  L  L L  N++ ++P  I     L   Y+  N L  LP E+G L 
Sbjct: 48  NQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTLPKEIGTLQ 107

Query: 93  KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
            L  LDL+ NQL+    E  +LR L  L L +N L  LP EIG +  L +L L  N LR 
Sbjct: 108 NLEVLDLYKNQLRTLPSEIGKLRSLERLHLEHNQLITLPQEIGTLQDLEELNLANNQLRI 167

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLS 209
           L   +        L++L+         + S     LIT+   +      K L L    L+
Sbjct: 168 LSKEI------GTLQHLQ---------DLSVFNNQLITLPQEIGKLQNLKYLRLAYNQLT 212

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P EI     +  L++  N +  LP E+ +  +LQ+L L+ N++   P  I T L  L 
Sbjct: 213 TLPKEIGRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLVTLPKEIGT-LQKLE 271

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
            L L NN L  +P +  K +  L+ L L+ N + SLP+      L +L+EL L   +L  
Sbjct: 272 WLYLTNNQLATLPQEIGK-LQKLEWLGLTNNQLKSLPQ--EIGKLQNLKELILENNRLES 328

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
            P +I  L  L+ L L  N   ++PE    L  L  L+L  N ++ LP E+G LE  L+ 
Sbjct: 329 FPKEIGTLSNLQRLHLEYNRFTTLPEEIGTLHRLPWLNLEHNQLTTLPQEIGRLE-RLEW 387

Query: 389 LRLDGNPLRSIRRTILDRGTKAVLKYL 415
           L L  N L ++ + I   GT   L++L
Sbjct: 388 LNLYNNRLATLPKEI---GTLRKLQHL 411



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 149/317 (47%), Gaps = 27/317 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  N+LT L    I     L +L    N L  +P+ IG+L  L  L+L  NR+++
Sbjct: 201 LKYLRLAYNQLTTLPKE-IGRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLVT 259

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I     L   Y+ NN L+ LP E+GKL KL  L L +NQLK    E  +L+ L  L
Sbjct: 260 LPKEIGTLQKLEWLYLTNNQLATLPQEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKEL 319

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NEDS 178
            L NN L   P EIG ++ L++L L  N   TL         P  +  L  RLP  N + 
Sbjct: 320 ILENNRLESFPKEIGTLSNLQRLHLEYNRFTTL---------PEEIGTLH-RLPWLNLEH 369

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
              TT    I    RL      L+L    L+ +P EI    ++  L L+ N +  LP E+
Sbjct: 370 NQLTTLPQEIGRLERLEW----LNLYNNRLATLPKEIGTLRKLQHLYLANNQLATLPKEI 425

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
               +L+ L LS N++   P+ I T L  L  L L NN LR + S     +  L+ LDLS
Sbjct: 426 GQLQNLKDLDLSDNQLVTLPEEIGT-LQRLEWLSLKNNQLRTL-SQEIGQLQNLKDLDLS 483

Query: 299 YNIASLPENPPFSSLPH 315
            N        PF++ P 
Sbjct: 484 GN--------PFTTFPQ 492



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 81/158 (51%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +E N+ T L    I +   L  L    N L  +P+ IG L RL  L+L+ NR+ +
Sbjct: 339 LQRLHLEYNRFTTLPEE-IGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLAT 397

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I     L   Y+ NN L+ LP E+G+L  L  LDL  NQL     E   L RL  L
Sbjct: 398 LPKEIGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWL 457

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L NN L  L  EIG++  L+ L L+GNP  T    +V
Sbjct: 458 SLKNNQLRTLSQEIGQLQNLKDLDLSGNPFTTFPQEIV 495


>gi|421084250|ref|ZP_15545113.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|410433150|gb|EKP77498.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 429

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 131/381 (34%), Positives = 192/381 (50%), Gaps = 25/381 (6%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           LI S+  L  +P+ I  L  L  LDL  N++ ++P  I    +L E  +  N+L+ LP E
Sbjct: 53  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 146
           +G+L  L  L+L+S +L     E  QLR L  LDLS NSL+ LP E+G++  L++L L  
Sbjct: 113 VGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQ 172

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
           N L TL         P  +  L++    + +S   TT    I     L    +EL L   
Sbjct: 173 NRLATL---------PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNL----QELDLHRN 219

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            L+ +P EI +   +  L+L    +  LP E+    +L+TL L  N++   P  I   L 
Sbjct: 220 QLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI-GELQ 278

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
           +L  L L  N +  +P +    +  LQ LDL  N + +LP+      L +LQEL L   Q
Sbjct: 279 NLEILVLRENRITALPKE-IGQLQNLQRLDLHQNQLTTLPK--EIGQLQNLQELCLDENQ 335

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L   P +I +LQ LR+LDL  N L ++P+    L +L EL L +N ++  P E+  L+ +
Sbjct: 336 LTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLK-N 394

Query: 386 LQALRLDGNPLRS-----IRR 401
           LQ L L  NPL S     IRR
Sbjct: 395 LQELHLYLNPLSSKEKKRIRR 415



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 118/359 (32%), Positives = 179/359 (49%), Gaps = 38/359 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+LT L    I     L EL  S N L  +P+ +G L  L RL+L+  ++ ++P 
Sbjct: 76  LDLGHNQLTALPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPK 134

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  +  N+L+ LP E+G+L  L  LDLH N+L    +E  QL+ L  LDL+
Sbjct: 135 EIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLN 194

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N L+ LP EI ++  L++L L  N L TL   +        L+ L++            
Sbjct: 195 SNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEI------GQLQNLKT------------ 236

Query: 183 TKEDLITMATRLSVTSKEL----SLEGMN-----LSAIPSEIWEAGEITKLDLSRNSIQE 233
               L  + T+L+   KE+    +L+ +N     L+ +P EI E   +  L L  N I  
Sbjct: 237 ----LNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITA 292

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQ L L +N++   P  I   L +L  L LD N L  +P +  + +  L+
Sbjct: 293 LPKEIGQLQNLQRLDLHQNQLTTLPKEI-GQLQNLQELCLDENQLTTLPKE-IEQLQNLR 350

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           +LDL  N + +LP+      L +LQEL L   QL   P +I +L+ L+ L L  N L S
Sbjct: 351 VLDLDNNQLTTLPK--EIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 407



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 151/323 (46%), Gaps = 43/323 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++   KLT L    I     L EL  S N L  +P+ +G L  L RLDLHQNR+ +
Sbjct: 119 LQRLNLNSQKLTTLPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLAT 177

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  + +N L+ LP E+ +L  L  LDLH NQL     E  QL+ L  L
Sbjct: 178 LPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTL 237

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L    L+ LP EIG++  L+ L L  N L TL                   + E ++ E
Sbjct: 238 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKE----------------IGELQNLE 281

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
               +E+ IT                    A+P EI +   + +LDL +N +  LP E+ 
Sbjct: 282 ILVLRENRIT--------------------ALPKEIGQLQNLQRLDLHQNQLTTLPKEIG 321

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +LQ L L  N++   P  I   L +L  L LDNN L  +P +    +  LQ L L  
Sbjct: 322 QLQNLQELCLDENQLTTLPKEI-EQLQNLRVLDLDNNQLTTLPKE-IGQLQNLQELCLDE 379

Query: 300 N-IASLPENPPFSSLPHLQELYL 321
           N + + P+      L +LQEL+L
Sbjct: 380 NQLTTFPK--EIRQLKNLQELHL 400



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 105/197 (53%), Gaps = 5/197 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L    L+ +P EI +   +  LDL  N +  LP E+    +LQ L
Sbjct: 40  LTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQEL 99

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            LS N +   P  +   L +L  L L++  L  +P +    +  LQ LDLS+N + +LP+
Sbjct: 100 DLSFNSLTTLPKEV-GQLENLQRLNLNSQKLTTLPKE-IGQLRNLQELDLSFNSLTTLPK 157

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +LQ L L + +L   P +I +L+ L+ LDL+ N L ++P+  + L +L ELD
Sbjct: 158 --EVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELD 215

Query: 367 LSDNNISALPPELGLLE 383
           L  N ++ LP E+G L+
Sbjct: 216 LHRNQLTTLPKEIGQLQ 232



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L L   +L   P +I +LQ L++LDL  N L ++P+    L +L ELDLS N+++ LP E
Sbjct: 53  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTI 403
           +G LE +LQ L L+   L ++ + I
Sbjct: 113 VGQLE-NLQRLNLNSQKLTTLPKEI 136


>gi|224052809|ref|XP_002197870.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Taeniopygia guttata]
          Length = 582

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 196/406 (48%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQCLPAE-VGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SLA  Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-L 238
                         LS  S+ L L    LSAIP  + +  E+ +L+L  N+I  LP   L
Sbjct: 283 --------------LSSLSR-LGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 190/423 (44%), Gaps = 65/423 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L +  NK+  L    I     L  L  + N L  +PE IGS +++  LDL  N +L 
Sbjct: 217 LTMLSIRENKIKQLPAE-IGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLD 275

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P +I    SL+   +  N LSA+P  L K S+L  L+L                     
Sbjct: 276 LPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLE-------------------- 315

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
             NN++S LP   G +++L KL          +S  V GP                 S+ 
Sbjct: 316 --NNNISTLPE--GLLSSLVKLTSLTLARNCFQSYPVGGP-----------------SQF 354

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSRNSIQELPPELS 239
           ST                  L++E   ++ IP  I+   ++ +KL++  N +  LP +  
Sbjct: 355 STI---------------YSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFG 399

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  ++  L+ LDL  
Sbjct: 400 TWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGIGNLRKLRELDLEE 457

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N + SLP    +  L  LQ+L L   QL   P  I  L  L  L L +N L  +PE    
Sbjct: 458 NKLESLPNEIAY--LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGT 515

Query: 359 LTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           L +L EL L+DN N+ +LP EL L    L  + ++  PL  +   I+  G   ++++LK 
Sbjct: 516 LENLEELYLNDNPNLHSLPFELALCS-KLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKM 574

Query: 418 KIP 420
           + P
Sbjct: 575 QGP 577



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHLLPSAIKELTQLTELYLYSNKLQCLPAEVGCLVNLVTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LSSLATLYLRFNRITTVEK-DIKNLSKLT 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +PE   + T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPE 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I +++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPKSL 303


>gi|301112348|ref|XP_002905253.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262095583|gb|EEY53635.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 702

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 225/483 (46%), Gaps = 71/483 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L + GNKL+ L N+ I     L  L   +N L  +PE IG+L +L  L+ H N + +
Sbjct: 140 LKELGLSGNKLSHLPNS-ITLLENLEALHVDENKLTALPERIGNLHKLHVLNAHSNHLTA 198

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY------------- 107
           +PSS     ++    +  N L +    L  L+KL  LDL  N+L  +             
Sbjct: 199 LPSSFGALRNMQNLDLKKNRLESTGDALATLTKLKFLDLRQNKLAVFPALPEGADLDQVF 258

Query: 108 -----------------------------------CVEACQLRLSVLDLSNNSLSGLPPE 132
                                                 AC  RL  LD++NN LS LPP 
Sbjct: 259 LGYNTLSTINETSILRVKDSVTVLDMRDNKLANLPANIACLYRLKTLDVANNDLSDLPPG 318

Query: 133 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 192
           +G +  L   ++ GNPLR +R ++++    +L KYLR+R       +    + D + +  
Sbjct: 319 LGYLKHLNHFIVDGNPLRAIRRAVISAGCESLKKYLRTRGAPPAGVDVLEEERDELQIER 378

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGE------ITKLDLSRNSIQELPPELSSCASLQT 246
             +  S  + L   +L+ +P ++   G+      +  L+LS N ++ LP  +    SL+T
Sbjct: 379 EQAAASGTMILMNNSLNVLPPDLVGQGQFDFGSTLFHLNLSSNQLRSLPAAIGELVSLKT 438

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPM----LQILDLSYN- 300
           L +  N+++   D  + +L  L  L+L  N L  +  S+   + P     L+ LD+  N 
Sbjct: 439 LTVEDNELQAL-DPSIAALPHLELLRLRKNSLSAESISEFLGNSPALGDSLKELDVRNNS 497

Query: 301 IASLPENPPFSSLPHLQELYL---RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
           +A+LP     S L  L+ L L   R   L   P    +L ++ ++ +S N L+++   + 
Sbjct: 498 LATLPVE--ISQLRSLETLLLGFNRLETLDRFPWS--QLTKVSVVSVSDNKLRALGRIY- 552

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           +   L  L   +N+++ +P ELGL  P L+A+ ++GNP R++R  ++ +G+  +L YLK+
Sbjct: 553 DAPLLASLSFENNSLTKVPCELGLC-PHLRAIYMNGNPQRTVRGGVIAKGSAEILAYLKN 611

Query: 418 KIP 420
           K+P
Sbjct: 612 KLP 614



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 164/376 (43%), Gaps = 93/376 (24%)

Query: 48  LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 107
           L+++DL  N I SI   I G  S+    +  NAL  LP         G  +LH+      
Sbjct: 70  LVKMDLSHNAIPSISDEIGGLTSVTSIKLTKNALQVLPE--------GFFELHA------ 115

Query: 108 CVEACQLRLSVLDLSNNSL-SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
                   L+ LDLS+N L   L    G +  L++L L+GN L  L +S+       LL 
Sbjct: 116 --------LTYLDLSHNELEQNLSESFGALIGLKELGLSGNKLSHLPNSIT------LL- 160

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                    E+ EA    E+ +T                    A+P  I    ++  L+ 
Sbjct: 161 ---------ENLEALHVDENKLT--------------------ALPERIGNLHKLHVLNA 191

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
             N +  LP    +  ++Q L L +N+++   DA L +L+ L  L L  N L   P+   
Sbjct: 192 HSNHLTALPSSFGALRNMQNLDLKKNRLESTGDA-LATLTKLKFLDLRQNKLAVFPA--- 247

Query: 287 KDIPMLQILD---LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ-LRIL 342
             +P    LD   L YN           +L  + E            T ILR++  + +L
Sbjct: 248 --LPEGADLDQVFLGYN-----------TLSTINE------------TSILRVKDSVTVL 282

Query: 343 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRT 402
           D+  N L ++P     L  L  LD+++N++S LPP LG L+  L    +DGNPLR+IRR 
Sbjct: 283 DMRDNKLANLPANIACLYRLKTLDVANNDLSDLPPGLGYLK-HLNHFIVDGNPLRAIRRA 341

Query: 403 ILDRGTKAVLKYLKDK 418
           ++  G +++ KYL+ +
Sbjct: 342 VISAGCESLKKYLRTR 357



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 173/436 (39%), Gaps = 76/436 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN---- 56
           + K+D+  N +  +S+  I   T +T +  +KN L  +PE    L  L  LDL  N    
Sbjct: 70  LVKMDLSHNAIPSISDE-IGGLTSVTSIKLTKNALQVLPEGFFELHALTYLDLSHNELEQ 128

Query: 57  --------------------RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 96
                               ++  +P+SI+   +L   ++  N L+ALP  +G L KL  
Sbjct: 129 NLSESFGALIGLKELGLSGNKLSHLPNSITLLENLEALHVDENKLTALPERIGNLHKLHV 188

Query: 97  LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
           L+ HSN L         LR +  LDL  N L      +  +T L+ L L  N L      
Sbjct: 189 LNAHSNHLTALPSSFGALRNMQNLDLKKNRLESTGDALATLTKLKFLDLRQNKLAVF--- 245

Query: 156 LVNGPTPALLKYLRSRLPENEDSEA--------STTKEDLITMATRLSVTSKELSLEGMN 207
                 PA        LPE  D +         ST  E  I +  + SVT   L +    
Sbjct: 246 ------PA--------LPEGADLDQVFLGYNTLSTINETSI-LRVKDSVTV--LDMRDNK 288

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+ +P+ I     +  LD++ N + +LPP L     L   I+  N ++    AI  ++ S
Sbjct: 289 LANLPANIACLYRLKTLDVANNDLSDLPPGLGYLKHLNHFIVDGNPLR----AIRRAVIS 344

Query: 268 LSCLKLDNN-PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
             C  L      R  P  G      + +L+   +   +      +S      + L    L
Sbjct: 345 AGCESLKKYLRTRGAPPAG------VDVLEEERDELQIEREQAAAS----GTMILMNNSL 394

Query: 327 REAPTDILRLQQLRI------LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
              P D++   Q         L+LS N L+S+P     L SL  L + DN + AL P + 
Sbjct: 395 NVLPPDLVGQGQFDFGSTLFHLNLSSNQLRSLPAAIGELVSLKTLTVEDNELQALDPSIA 454

Query: 381 LLEPSLQALRLDGNPL 396
            L P L+ LRL  N L
Sbjct: 455 AL-PHLELLRLRKNSL 469



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 99/213 (46%), Gaps = 13/213 (6%)

Query: 186 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 245
           D    A R +  +  LSL   NL   PS ++   E  + D  +            C  L 
Sbjct: 22  DQTARALREARRTGVLSLPARNLIEFPSPVYHLEEHLEKDEKK----------WECIDLV 71

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 305
            + LS N I    D I   L+S++ +KL  N L+ +P +GF ++  L  LDLS+N     
Sbjct: 72  KMDLSHNAIPSISDEI-GGLTSVTSIKLTKNALQVLP-EGFFELHALTYLDLSHNELEQN 129

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
            +  F +L  L+EL L   +L   P  I  L+ L  L + +N L ++PE   NL  L  L
Sbjct: 130 LSESFGALIGLKELGLSGNKLSHLPNSITLLENLEALHVDENKLTALPERIGNLHKLHVL 189

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           +   N+++ALP   G L  ++Q L L  N L S
Sbjct: 190 NAHSNHLTALPSSFGALR-NMQNLDLKKNRLES 221


>gi|357627630|gb|EHJ77268.1| putative shoc2 [Danaus plexippus]
          Length = 567

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 178/394 (45%), Gaps = 47/394 (11%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
           RLDL ++ I S+P ++     L EFY+  N L ALPAE G L+ L TL L+ N L     
Sbjct: 90  RLDLSKSSITSLPPNVRDLTHLVEFYLYGNKLVALPAEFGCLTNLQTLALNENSLTSLPD 149

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
               LR L VLDL +N LS +P  + K+T+L  L L  N +R +   + N     +L   
Sbjct: 150 SLAHLRSLKVLDLRHNKLSDIPEVVYKLTSLTTLFLRFNRIRVVGDGIANLTNLTMLS-- 207

Query: 169 RSRLPENEDSEASTTKEDLITMATRLSVTSKEL----------------SLEGMNLSAIP 212
              L EN+  E S+    L+ + T   V+   L                 L+   L  IP
Sbjct: 208 ---LRENKIKELSSGIGKLVNLVT-FDVSHNHLEHLPQEIGNCVNLSTLDLQHNELLDIP 263

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
             I     + ++ L  N +  +P  LS+C  +    +  N I   PD +L SL+ L+ L 
Sbjct: 264 DTIGNLQALNRIGLRYNRLNAIPASLSNCKHMDEFNVEGNSISQLPDGLLCSLTELTSLT 323

Query: 273 LDNNPLRQVPSDG---FKDIPML-----QILDLSYNIASLPENPP--------FSSLP-- 314
           L  N     PS G   F  +  +     QI  + Y I S  +N           +SLP  
Sbjct: 324 LSRNSFMSYPSGGPAQFTSVSSINLEHNQIDKIPYGIFSRAKNLTKLIMKENLLTSLPLD 383

Query: 315 -----HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
                ++ EL L   QL + P DI  L  L +L LS N L+ IP    NL  L  LDL +
Sbjct: 384 IGTWTNMVELNLGTNQLVKLPDDIQSLINLEVLILSNNLLKRIPPSIGNLRKLRVLDLEE 443

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           N I  LP E+G L+  L+ L +  N L S+ R+I
Sbjct: 444 NKIEILPNEIGFLQ-ELKKLIVQSNQLTSLPRSI 476



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 203/421 (48%), Gaps = 21/421 (4%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  NKL+ +   ++   T LT L    N +  + + I +L+ L  L L +N+I  + S
Sbjct: 160 LDLRHNKLSDIPE-VVYKLTSLTTLFLRFNRIRVVGDGIANLTNLTMLSLRENKIKELSS 218

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L  F + +N L  LP E+G    L TLDL  N+L +       L+ L+ + L 
Sbjct: 219 GIGKLVNLVTFDVSHNHLEHLPQEIGNCVNLSTLDLQHNELLDIPDTIGNLQALNRIGLR 278

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ +P  +     + +  + GN +    S L +G   +L +     L  N      +
Sbjct: 279 YNRLNAIPASLSNCKHMDEFNVEGNSI----SQLPDGLLCSLTELTSLTLSRNSFMSYPS 334

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSC 241
                 T     SV+S  ++LE   +  IP  I+  A  +TKL +  N +  LP ++ + 
Sbjct: 335 GGPAQFT-----SVSS--INLEHNQIDKIPYGIFSRAKNLTKLIMKENLLTSLPLDIGTW 387

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 300
            ++  L L  N++   PD I  SL +L  L L NN L+++P     ++  L++LDL  N 
Sbjct: 388 TNMVELNLGTNQLVKLPDDI-QSLINLEVLILSNNLLKRIPP-SIGNLRKLRVLDLEENK 445

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
           I  LP    F  L  L++L ++  QL   P  I  L  L  L + +N+LQ +PE    L 
Sbjct: 446 IEILPNEIGF--LQELKKLIVQSNQLTSLPRSIGHLINLTYLSVGENNLQYLPEEIGTLE 503

Query: 361 SLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           +L  L L+DN N+  LP EL L   SLQ + ++  PL S+   ++  G   V++YLK + 
Sbjct: 504 NLESLYLNDNPNLCNLPFELALCV-SLQIMSIENCPLTSLPPDVVSSGPSLVIQYLKSQG 562

Query: 420 P 420
           P
Sbjct: 563 P 563



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 139/301 (46%), Gaps = 47/301 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL----NGMPETIGSLSRLIRLDLHQN 56
           M + +VEGN ++ L + L+ S T LT L  S+N      +G P    S+S    ++L  N
Sbjct: 295 MDEFNVEGNSISQLPDGLLCSLTELTSLTLSRNSFMSYPSGGPAQFTSVS---SINLEHN 351

Query: 57  RILSIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL- 114
           +I  IP  I S   +L +  M  N L++LP ++G  + +  L+L +NQL +   +   L 
Sbjct: 352 QIDKIPYGIFSRAKNLTKLIMKENLLTSLPLDIGTWTNMVELNLGTNQLVKLPDDIQSLI 411

Query: 115 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
            L VL LSNN L  +PP IG +  LR L L  N +  L         P  + +L+     
Sbjct: 412 NLEVLILSNNLLKRIPPSIGNLRKLRVLDLEENKIEIL---------PNEIGFLQEL--- 459

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
                                   K+L ++   L+++P  I     +T L +  N++Q L
Sbjct: 460 ------------------------KKLIVQSNQLTSLPRSIGHLINLTYLSVGENNLQYL 495

Query: 235 PPELSSCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           P E+ +  +L++L L+ N  + + P  +   + SL  + ++N PL  +P D     P L 
Sbjct: 496 PEEIGTLENLESLYLNDNPNLCNLPFELALCV-SLQIMSIENCPLTSLPPDVVSSGPSLV 554

Query: 294 I 294
           I
Sbjct: 555 I 555



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 91/184 (49%), Gaps = 6/184 (3%)

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
           + +LDLS++SI  LPP +     L    L  NK+   P A    L++L  L L+ N L  
Sbjct: 88  VKRLDLSKSSITSLPPNVRDLTHLVEFYLYGNKLVALP-AEFGCLTNLQTLALNENSLTS 146

Query: 281 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
           +P D    +  L++LDL +N ++ +PE      L  L  L+LR  ++R     I  L  L
Sbjct: 147 LP-DSLAHLRSLKVLDLRHNKLSDIPE--VVYKLTSLTTLFLRFNRIRVVGDGIANLTNL 203

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            +L L +N ++ +  G   L +L   D+S N++  LP E+G    +L  L L  N L  I
Sbjct: 204 TMLSLRENKIKELSSGIGKLVNLVTFDVSHNHLEHLPQEIGNCV-NLSTLDLQHNELLDI 262

Query: 400 RRTI 403
             TI
Sbjct: 263 PDTI 266



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 7/195 (3%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           K L L   +++++P  + +   + +  L  N +  LP E     +LQTL L+ N +   P
Sbjct: 89  KRLDLSKSSITSLPPNVRDLTHLVEFYLYGNKLVALPAEFGCLTNLQTLALNENSLTSLP 148

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 318
           D+ L  L SL  L L +N L  +P   +K +  L  L L +N   +  +   ++L +L  
Sbjct: 149 DS-LAHLRSLKVLDLRHNKLSDIPEVVYK-LTSLTTLFLRFNRIRVVGD-GIANLTNLTM 205

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L LR  +++E  + I +L  L   D+S N L+ +P+   N  +L+ LDL  N +  +P  
Sbjct: 206 LSLRENKIKELSSGIGKLVNLVTFDVSHNHLEHLPQEIGNCVNLSTLDLQHNELLDIPDT 265

Query: 379 LGLLEPSLQALRLDG 393
           +G    +LQAL   G
Sbjct: 266 IG----NLQALNRIG 276



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 4/90 (4%)

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           R + ++ LDLS++S+ S+P   ++LT L E  L  N + ALP E G L  +LQ L L+ N
Sbjct: 84  RDEGVKRLDLSKSSITSLPPNVRDLTHLVEFYLYGNKLVALPAEFGCLT-NLQTLALNEN 142

Query: 395 PLRSIRRTILDRGTKAVLKYLKDK---IPE 421
            L S+  ++    +  VL    +K   IPE
Sbjct: 143 SLTSLPDSLAHLRSLKVLDLRHNKLSDIPE 172


>gi|194743396|ref|XP_001954186.1| GF18150 [Drosophila ananassae]
 gi|190627223|gb|EDV42747.1| GF18150 [Drosophila ananassae]
          Length = 782

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 195/398 (48%), Gaps = 19/398 (4%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL-GK 90
           +N L G+P+ +G L +L  L L  N IL +P    G  SL E +  NN +  +P  +   
Sbjct: 394 QNDLIGLPDDMGLLRKLECLYLQHNDILELPD-FEGNESLNELHASNNFIKTIPKSMCSN 452

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL  N++ E   E C LR L+ LD+SNNS+S LP  +  +  L  L + GNP+
Sbjct: 453 LPHLKILDLRDNKITELPDELCLLRNLTRLDVSNNSISVLPVTLSSLAHLISLQVDGNPI 512

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
           +T+R  ++   T  +LK L  R   N++   S    D  + +  +SVT   L     +  
Sbjct: 513 KTIRRDILQCGTTRILKTLHERAMANKEEGGS----DAASTSGGISVT--RLRGGHTDTG 566

Query: 210 AIPSEI---WEAGEITKLDLSRNSIQELPPELSSCA---SLQTLILSRNKIKDWPDAILT 263
            IP      ++      L ++   + E+P ++   A    +  +  +RN++   P+ +  
Sbjct: 567 DIPENFPDRYKLRHTRTLAVNLEQLTEVPEQVFQLAKEEGVHVVDFARNQLSTLPNGLQH 626

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
               L+ L L NN +  VP    +   +  +   +  +  LP+   F  L  L+EL +  
Sbjct: 627 MREQLTELVLSNNLIGHVPQFISQFTRISYMNLSNNLLNDLPKE--FGVLVTLRELNVAN 684

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLL 382
            + +  P  I  LQ L I   S+N ++ +   G + +  LT LDL +N+I  +PP LG L
Sbjct: 685 NRFQFIPNGIYELQGLEIFIASENHIKQLNVSGLQCMPRLTTLDLRNNDIDNVPPILGNL 744

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
             ++  L L GNP R  R  IL +GT+A++ YL+D+IP
Sbjct: 745 T-NITHLELVGNPFRQPRHQILMKGTEAIMSYLRDRIP 781



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 157/330 (47%), Gaps = 41/330 (12%)

Query: 94  LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L  LDL SN L     +   L  L+VL L +N+L  LPPEIGK+  L +L ++ N L  L
Sbjct: 249 LNNLDLSSNALTHLSSKIENLASLTVLTLHDNALVELPPEIGKLEKLMRLNVSHNKLSHL 308

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
              + + P    L++L   +  NE  E      DL  +        + L     N+ ++P
Sbjct: 309 PREIYSLPD---LRHLN--ISYNEFKELDPDISDLHML--------EFLDGGHNNIQSLP 355

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
             I     +T L L  N I+ELPP+L +  SLQ + L +N +   PD  +  L  L CL 
Sbjct: 356 GGIGFLVRLTTLLLPYNHIKELPPDLVNMRSLQKIELEQNDLIGLPDD-MGLLRKLECLY 414

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
           L +N + ++P   F+    L  L  S N          S+LPHL                
Sbjct: 415 LQHNDILELPD--FEGNESLNELHASNNFIKTIPKSMCSNLPHL---------------- 456

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
                  +ILDL  N +  +P+    L +LT LD+S+N+IS LP  L  L   L +L++D
Sbjct: 457 -------KILDLRDNKITELPDELCLLRNLTRLDVSNNSISVLPVTLSSLA-HLISLQVD 508

Query: 393 GNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
           GNP+++IRR IL  GT  +LK L ++   N
Sbjct: 509 GNPIKTIRRDILQCGTTRILKTLHERAMAN 538



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 2/172 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D   N+L+ L N L      LTEL+ S NL+  +P+ I   +R+  ++L  N +  +P 
Sbjct: 610 VDFARNQLSTLPNGLQHMREQLTELVLSNNLIGHVPQFISQFTRISYMNLSNNLLNDLPK 669

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA--CQLRLSVLDL 121
                 +L E  + NN    +P  + +L  L       N +K+  V    C  RL+ LDL
Sbjct: 670 EFGVLVTLRELNVANNRFQFIPNGIYELQGLEIFIASENHIKQLNVSGLQCMPRLTTLDL 729

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            NN +  +PP +G +T +  L L GNP R  R  ++   T A++ YLR R+P
Sbjct: 730 RNNDIDNVPPILGNLTNITHLELVGNPFRQPRHQILMKGTEAIMSYLRDRIP 781



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 177/413 (42%), Gaps = 47/413 (11%)

Query: 10  KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 69
           KLT+   +   +   L  L  S N L  +   I +L+ L  L LH N ++ +P  I    
Sbjct: 234 KLTMKEEDAWWNQVPLNNLDLSSNALTHLSSKIENLASLTVLTLHDNALVELPPEIGKLE 293

Query: 70  SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 128
            L    + +N LS LP E+  L  L  L++  N+ KE   +   L  L  LD  +N++  
Sbjct: 294 KLMRLNVSHNKLSHLPREIYSLPDLRHLNISYNEFKELDPDISDLHMLEFLDGGHNNIQS 353

Query: 129 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT--------------PALLKYLRS---- 170
           LP  IG +  L  LLL  N ++ L   LVN  +              P  +  LR     
Sbjct: 354 LPGGIGFLVRLTTLLLPYNHIKELPPDLVNMRSLQKIELEQNDLIGLPDDMGLLRKLECL 413

Query: 171 --------RLPENEDSEAST---TKEDLITMATRLSVTS----KELSLEGMNLSAIPSEI 215
                    LP+ E +E+        + I    +   ++    K L L    ++ +P E+
Sbjct: 414 YLQHNDILELPDFEGNESLNELHASNNFIKTIPKSMCSNLPHLKILDLRDNKITELPDEL 473

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
                +T+LD+S NSI  LP  LSS A L +L +  N IK     IL    +   LK  +
Sbjct: 474 CLLRNLTRLDVSNNSISVLPVTLSSLAHLISLQVDGNPIKTIRRDIL-QCGTTRILKTLH 532

Query: 276 NPLRQVPSDGFKD-------IPMLQILDLSYNIASLPEN-PPFSSLPHLQELYLRRMQLR 327
                   +G  D       I + ++     +   +PEN P    L H + L +   QL 
Sbjct: 533 ERAMANKEEGGSDAASTSGGISVTRLRGGHTDTGDIPENFPDRYKLRHTRTLAVNLEQLT 592

Query: 328 EAPTDILRLQQ---LRILDLSQNSLQSIPEGFKNL-TSLTELDLSDNNISALP 376
           E P  + +L +   + ++D ++N L ++P G +++   LTEL LS+N I  +P
Sbjct: 593 EVPEQVFQLAKEEGVHVVDFARNQLSTLPNGLQHMREQLTELVLSNNLIGHVP 645



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 27/181 (14%)

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
           W    +  LDLS N++  L  ++ + ASL  L L  N + + P  I   L  L  L + +
Sbjct: 244 WNQVPLNNLDLSSNALTHLSSKIENLASLTVLTLHDNALVELPPEI-GKLEKLMRLNVSH 302

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
           N L  +P + +  +P L+ L++SYN                        + +E   DI  
Sbjct: 303 NKLSHLPREIYS-LPDLRHLNISYN------------------------EFKELDPDISD 337

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L  L  LD   N++QS+P G   L  LT L L  N+I  LPP+L  +  SLQ + L+ N 
Sbjct: 338 LHMLEFLDGGHNNIQSLPGGIGFLVRLTTLLLPYNHIKELPPDLVNMR-SLQKIELEQND 396

Query: 396 L 396
           L
Sbjct: 397 L 397


>gi|167379285|ref|XP_001735078.1| oligodendrocyte-myelin glycoprotein precursor [Entamoeba dispar
           SAW760]
 gi|165903118|gb|EDR28771.1| oligodendrocyte-myelin glycoprotein precursor, putative [Entamoeba
           dispar SAW760]
          Length = 508

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 132/433 (30%), Positives = 206/433 (47%), Gaps = 39/433 (9%)

Query: 14  LSNNLIASW-------TMLTELIASKN--LLNGMPETIGSLSRLIRLDLHQNRILSIPSS 64
           LSNN I S        + L EL   +N    +G+   I   S L RLD+  N++ SIP  
Sbjct: 68  LSNNRITSIPDSIQKASNLRELYLGQNNLFYDGISSEIKMCSNLQRLDISMNKLESIPPE 127

Query: 65  ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 123
           I    SL    +  N L +LP E+G L KL TL ++ N +++   E   LR L  LDLSN
Sbjct: 128 IGSLLSLQYLNISENNLKSLPPEIGMLDKLQTLLVNKNSIRKLPTEIGNLRSLYELDLSN 187

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N +  LP E+  M  L+ L +  N L      L N       K+L     +N        
Sbjct: 188 NQMDLLPEELSNMIALKILRIGFNKLSGNIDVLTN------FKFLVELDCQNNQGILELP 241

Query: 184 KEDLITMATRLSVTS---------------KELSL-EGMNLSAIPSEIWEAGEITKLDLS 227
             D +   TRL V +                EL++ + + +  +P EI+    + +LD  
Sbjct: 242 PLDSLQNLTRLVVKNLPITSIPGLSSLKMLCELNVRDNIKMKGMPEEIFNIASLQRLDFV 301

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKD--WPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
             +I  LPP ++S  +L  L L+ N + +  +P+ I ++L++++ L + NN +   P   
Sbjct: 302 GCNITVLPPNITSLTNLNILELAHNSLNESSFPEGI-STLTNITKLSISNNQIHSYPQ-C 359

Query: 286 FKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
             D+  +  LD+S N+   LPE   FS+L ++Q L +   +L   P  + RL  +  LD 
Sbjct: 360 LCDLTSIVDLDVSNNLMVELPET--FSNLTNVQNLTIAGNRLNRLPESLGRLISVTYLDA 417

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
             N L+S+P    +L  L  L+L+ N I  LP E+G L+  LQ + L  NPL    + ++
Sbjct: 418 RNNQLKSLPPSIGDLRQLNRLELTQNMIPVLPVEMGQLDGILQTIELTNNPLVVPPKEVV 477

Query: 405 DRGTKAVLKYLKD 417
            +G   + +YLKD
Sbjct: 478 VKGAHEICQYLKD 490



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 191/409 (46%), Gaps = 42/409 (10%)

Query: 2   SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 61
           S +++ G  L+     +  S  + T   AS+N    +PE +  +  L  L L  NRI SI
Sbjct: 19  SSIEISGKNLSEFPKQI--SKCVCTNFNASQNDFTSIPEDVCIMPNLEVLTLSNNRITSI 76

Query: 62  PSSISGCCSLAEFYMGNNAL--SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSV 118
           P SI    +L E Y+G N L    + +E+   S L  LD+  N+L+    E    L L  
Sbjct: 77  PDSIQKASNLRELYLGQNNLFYDGISSEIKMCSNLQRLDISMNKLESIPPEIGSLLSLQY 136

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           L++S N+L  LPPEIG +  L+ LL+  N +R L         P  +  LRS      + 
Sbjct: 137 LNISENNLKSLPPEIGMLDKLQTLLVNKNSIRKL---------PTEIGNLRSLY----EL 183

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPE 237
           + S  + DL+       +  K L +    LS     +     + +LD   N  I ELPP 
Sbjct: 184 DLSNNQMDLLPEELSNMIALKILRIGFNKLSGNIDVLTNFKFLVELDCQNNQGILELPP- 242

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL-------DNNPLRQVPSDGFKDIP 290
                SLQ   L+R  +K+ P   +TS+  LS LK+       DN  ++ +P + F +I 
Sbjct: 243 ---LDSLQN--LTRLVVKNLP---ITSIPGLSSLKMLCELNVRDNIKMKGMPEEIF-NIA 293

Query: 291 MLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREA--PTDILRLQQLRILDLSQN 347
            LQ LD    NI  LP  P  +SL +L  L L    L E+  P  I  L  +  L +S N
Sbjct: 294 SLQRLDFVGCNITVLP--PNITSLTNLNILELAHNSLNESSFPEGISTLTNITKLSISNN 351

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            + S P+   +LTS+ +LD+S+N +  LP     L  ++Q L + GN L
Sbjct: 352 QIHSYPQCLCDLTSIVDLDVSNNLMVELPETFSNLT-NVQNLTIAGNRL 399


>gi|71895087|ref|NP_001026407.1| leucine-rich repeat protein SHOC-2 [Gallus gallus]
 gi|82231244|sp|Q5F4C4.1|SHOC2_CHICK RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|60098359|emb|CAH65010.1| hypothetical protein RCJMB04_1b13 [Gallus gallus]
          Length = 529

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 187/388 (48%), Gaps = 42/388 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +     L  L  S+N L  +P+++ +L +L  LDL  N++  IPS +    SLA  Y+  
Sbjct: 142 VGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATLYLRF 201

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++ +  ++  LSKL  L +  N++K+   E  +L  L  LD+++N L  LP EIG  T
Sbjct: 202 NRITTVEKDIKTLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCT 261

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            +  L L  N L  L  ++ N                                   LS  
Sbjct: 262 QITNLDLQHNELLDLPETIGN-----------------------------------LSSL 286

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKD 256
           S+ L L    LSAIP  + +  E+ +L+L  N+I  LP  L SS   L +L L+RN  + 
Sbjct: 287 SR-LGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQS 345

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
           +P    +  S++  L +++N + ++P   F    +L  L++  N + SLP +  F +   
Sbjct: 346 YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD--FGTWTS 403

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           + EL L   QL + P D+  L  L +L LS N L+ +P G  NL  L ELDL +N + +L
Sbjct: 404 MVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESL 463

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P E+  L+  LQ L L  N L ++ R I
Sbjct: 464 PNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 155/363 (42%), Gaps = 83/363 (22%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L  L  + N L  +PE IGS +++  LDL  N +L +P +I    SL+   +  
Sbjct: 234 IGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRY 293

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N LSA+P  L K S+L  L+L                       NN++S LP   G +++
Sbjct: 294 NRLSAIPKSLAKCSELDELNLE----------------------NNNISTLPE--GLLSS 329

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L KL          +S  V GP+     Y                               
Sbjct: 330 LVKLTSLTLARNCFQSYPVGGPSQFSTIY------------------------------- 358

Query: 199 KELSLEGMNLSAIPSEIWEAGEI-TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             L++E   ++ IP  I+   ++ +KL++  N +  LP +  +  S+  L L+ N++   
Sbjct: 359 -SLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P+ + + L SL  L L NN L+++P  G  ++  L+ LDL  N                 
Sbjct: 418 PEDV-SGLVSLEVLILSNNLLKKLP-HGIGNLRKLRELDLEEN----------------- 458

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
                  +L   P +I  L+ L+ L L+ N L ++P G  +LT+LT L L +N ++ LP 
Sbjct: 459 -------KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPE 511

Query: 378 ELG 380
           E+G
Sbjct: 512 EIG 514



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS + E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLAKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LTSLATLYLRFNRITTVEK-DIKTLSKLT 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +PE   + T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPE 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I +++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPKSL 303



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 134/285 (47%), Gaps = 19/285 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I S T +T L    N L  +PETIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPEE-IGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPK 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C  L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  I    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGIGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P +
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLPEE 512



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 24/114 (21%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M +L++  N+LT +  + ++    L  LI S NLL  +P  IG+L +L  LDL +N++ S
Sbjct: 404 MVELNLATNQLTKIPED-VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLES 462

Query: 61  IPSSIS-----------------------GCCSLAEFYMGNNALSALPAELGKL 91
           +P+ I+                          +L    +G N L+ LP E+GK+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGKI 516


>gi|417761876|ref|ZP_12409877.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776956|ref|ZP_12424785.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418673273|ref|ZP_13234595.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942287|gb|EKN87903.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573245|gb|EKQ36298.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579766|gb|EKQ47605.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 374

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 190/393 (48%), Gaps = 44/393 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+L +L    I     L  L  S N +  +P+ I  L  L  LDL  N++  +P 
Sbjct: 2   LDLSDNQLIILPKE-IRQLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPK 60

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I    +L E Y+ NN L+  P E+GKL KL  L+L +NQ+K    E  +L +L  L L 
Sbjct: 61  EIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLP 120

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN L+ LP EIGK+  L+ L L+ N ++TL         P  ++ L+             
Sbjct: 121 NNQLTTLPQEIGKLQKLQWLNLSYNQIKTL---------PQEIEKLQKL----------- 160

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                           + L L    L+ +P EI +  ++  L L  N +  LP E+    
Sbjct: 161 ----------------QWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQ 204

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +L+ L L+ N++   P  I   L +L  L L +N L  +P +    +  LQ+LDL  N +
Sbjct: 205 NLKVLFLNNNQLTTLPQEI-GHLQNLQDLYLVSNQLTTIPKE-IGQLQNLQMLDLGNNQL 262

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
             LP+      L +LQ LYL   QL   P +I +LQ L+ L LS N L +IP+    L +
Sbjct: 263 TILPK--EIGKLQNLQWLYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQN 320

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           L EL LS+N +  +P E+G L+ +LQ L L  N
Sbjct: 321 LQELYLSNNQLITIPKEIGQLQ-NLQTLYLRNN 352



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 174/355 (49%), Gaps = 43/355 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL  N+++ +P  I    +L    + +N +  LP E+ +L  L  LDL SNQL     E
Sbjct: 2   LDLSDNQLIILPKEIRQLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPKE 61

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L+ L  L LSNN L+  P EIGK+  L+ L L+ N ++T+   +       L K   
Sbjct: 62  IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEI-----EKLQKLQS 116

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
             LP N+                               L+ +P EI +  ++  L+LS N
Sbjct: 117 LYLPNNQ-------------------------------LTTLPQEIGKLQKLQWLNLSYN 145

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            I+ LP E+     LQ L L +N++   P  I   L  L  L LDNN L  +P +    +
Sbjct: 146 QIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEI-EKLQKLESLGLDNNQLTTLPQE-IGQL 203

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L++L L+ N + +LP+      L +LQ+LYL   QL   P +I +LQ L++LDL  N 
Sbjct: 204 QNLKVLFLNNNQLTTLPQ--EIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQ 261

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L  +P+    L +L  L LS+N ++ +P E+G L+ +LQ L L  N L +I + I
Sbjct: 262 LTILPKEIGKLQNLQWLYLSNNQLTTIPKEIGQLQ-NLQELYLSNNQLTTIPKEI 315



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/355 (32%), Positives = 161/355 (45%), Gaps = 42/355 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT+L    I     L EL  S N L   P+ IG L +L  L+L  N+I +
Sbjct: 45  LQMLDLRSNQLTILPKE-IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKT 103

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  I     L   Y+ NN L+ LP E+GKL KL  L+L  NQ+K    E  +L +L  L
Sbjct: 104 IPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWL 163

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N L+ LP EI K+  L  L L  N L TL   +        L+ L+     N  ++
Sbjct: 164 YLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEI------GQLQNLKVLFLNN--NQ 215

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            +T  +++  +        ++L L    L+ IP EI +   +  LDL  N +  LP E+ 
Sbjct: 216 LTTLPQEIGHLQNL-----QDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIG 270

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +LQ L LS N++   P  I   L +L  L L NN L  +P +               
Sbjct: 271 KLQNLQWLYLSNNQLTTIPKEI-GQLQNLQELYLSNNQLTTIPKE--------------- 314

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
                        L +LQELYL   QL   P +I +LQ L+ L L  N   SI E
Sbjct: 315 ----------IGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQF-SIEE 358


>gi|291224493|ref|XP_002732238.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 461

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 181/347 (52%), Gaps = 21/347 (6%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +P  IG    L +L L  N+I  IP S+     L E YMG NAL+A+P E+GKL 
Sbjct: 132 NGLTIVPRKIGECHELQKLKLSSNKIAKIPDSLCALEQLTELYMGYNALTAIPDEIGKLK 191

Query: 93  KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
            +  L+L  N++ +     C L +L+ L +  N+L+ +P EIGK+ +++ L L  N +  
Sbjct: 192 NMNILNLTFNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNIEK 251

Query: 152 LRSSLVNGPTPALLKYLRSRLPE-NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
           +  SL      AL      +L E N    A T   D IT    + +    L L   N++ 
Sbjct: 252 IPDSLC-----AL-----EQLTELNVRYNALTAIPDEITKLKSMKI----LDLSSNNIAK 297

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           IP  +    ++T+L +  +++  +P E++   S++ L LS +K    PD++ T L  L+ 
Sbjct: 298 IPDSLCALEQLTELYMGSDALTAIPDEITKLKSMKILDLSFSKFAKIPDSLCT-LEQLTK 356

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSY-NIASLPENPPFSSLPHLQELYLRRMQLREA 329
           L +  N L  +P D    +  L+IL+L++ NIA +P++    +L  L EL +    L   
Sbjct: 357 LNMHYNALTAIP-DEITKLKSLKILNLNHNNIAKIPDS--LCALEQLTELNMVSNALTAI 413

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           P +I +L+ ++ L+LS N +  IP+    L  LTELD+  N ++++P
Sbjct: 414 PDEISKLKSMKTLNLSFNKIAKIPDSLCALEQLTELDMMSNALTSIP 460



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 174/354 (49%), Gaps = 41/354 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  NK+  + ++L A    LTEL    N L  +P+ IG L  +  L+L  N+I  
Sbjct: 147 LQKLKLSSNKIAKIPDSLCA-LEQLTELYMGYNALTAIPDEIGKLKNMNILNLTFNKIAK 205

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP S+     L E YM  NAL+A+P E+GKL  +  L L++N +++     C L +L+ L
Sbjct: 206 IPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNIEKIPDSLCALEQLTEL 265

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           ++  N+L+ +P EI K+ +++ L L+ N +  +  SL      AL +     +     S+
Sbjct: 266 NVRYNALTAIPDEITKLKSMKILDLSSNNIAKIPDSLC-----ALEQLTELYM----GSD 316

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           A T   D IT    + +    L L     + IP  +    ++TKL++  N++  +P E++
Sbjct: 317 ALTAIPDEITKLKSMKI----LDLSFSKFAKIPDSLCTLEQLTKLNMHYNALTAIPDEIT 372

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              SL+ L L+ N I   PD+ L +L  L+ L + +N L  +P D    +  ++ L+LS+
Sbjct: 373 KLKSLKILNLNHNNIAKIPDS-LCALEQLTELNMVSNALTAIP-DEISKLKSMKTLNLSF 430

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           N                        ++ + P  +  L+QL  LD+  N+L SIP
Sbjct: 431 N------------------------KIAKIPDSLCALEQLTELDMMSNALTSIP 460



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 170/327 (51%), Gaps = 20/327 (6%)

Query: 75  YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 133
           Y  NN L+ +P ++G+  +L  L L SN++ +     C L +L+ L +  N+L+ +P EI
Sbjct: 128 YTQNNGLTIVPRKIGECHELQKLKLSSNKIAKIPDSLCALEQLTELYMGYNALTAIPDEI 187

Query: 134 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 193
           GK+  +  L LT N +  +  SL      AL +     +  N    A T   D I     
Sbjct: 188 GKLKNMNILNLTFNKIAKIPDSLC-----ALEQLTELYMEYN----ALTAIPDEIGKLKS 238

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           + +    L L   N+  IP  +    ++T+L++  N++  +P E++   S++ L LS N 
Sbjct: 239 MKI----LKLNNNNIEKIPDSLCALEQLTELNVRYNALTAIPDEITKLKSMKILDLSSNN 294

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 312
           I   PD+ L +L  L+ L + ++ L  +P D    +  ++ILDLS++  A +P++    +
Sbjct: 295 IAKIPDS-LCALEQLTELYMGSDALTAIP-DEITKLKSMKILDLSFSKFAKIPDS--LCT 350

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  L +L +    L   P +I +L+ L+IL+L+ N++  IP+    L  LTEL++  N +
Sbjct: 351 LEQLTKLNMHYNALTAIPDEITKLKSLKILNLNHNNIAKIPDSLCALEQLTELNMVSNAL 410

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
           +A+P E+  L+ S++ L L  N +  I
Sbjct: 411 TAIPDEISKLK-SMKTLNLSFNKIAKI 436



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 118/219 (53%), Gaps = 8/219 (3%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L L    ++ IP  +    ++T+L +  N++  +P E+    ++  L L+ NKI   P
Sbjct: 148 QKLKLSSNKIAKIPDSLCALEQLTELYMGYNALTAIPDEIGKLKNMNILNLTFNKIAKIP 207

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
           D+ L +L  L+ L ++ N L  +P D    +  ++IL L+ N I  +P++    +L  L 
Sbjct: 208 DS-LCALEQLTELYMEYNALTAIP-DEIGKLKSMKILKLNNNNIEKIPDS--LCALEQLT 263

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           EL +R   L   P +I +L+ ++ILDLS N++  IP+    L  LTEL +  + ++A+P 
Sbjct: 264 ELNVRYNALTAIPDEITKLKSMKILDLSSNNIAKIPDSLCALEQLTELYMGSDALTAIPD 323

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI--LDRGTKAVLKY 414
           E+  L+ S++ L L  +    I  ++  L++ TK  + Y
Sbjct: 324 EITKLK-SMKILDLSFSKFAKIPDSLCTLEQLTKLNMHY 361


>gi|255089727|ref|XP_002506785.1| predicted protein [Micromonas sp. RCC299]
 gi|226522058|gb|ACO68043.1| predicted protein [Micromonas sp. RCC299]
          Length = 394

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 121/360 (33%), Positives = 177/360 (49%), Gaps = 41/360 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL++  N+LT +    I   T L EL   +N L  +P  IG L+ L  L L  N++ S
Sbjct: 52  LRKLNLGRNQLTSVPAE-IGQLTSLEELRLDRNQLTSVPAEIGQLTSLEVLYLESNQLTS 110

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I    SL  FY+  N L++LPAE+G+L+ L  L L  NQL     E  Q+  L  L
Sbjct: 111 VPAEIGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGLSLARNQLTSVPAEIWQITALEAL 170

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L+ N L+ LP EIG++T+L++L L GN L ++         PA +  L      + DS 
Sbjct: 171 WLNENQLTSLPAEIGQLTSLKELGLGGNQLTSV---------PADIGQLTLLEGLSLDSN 221

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             T+    I     L    K L L+G  L+++P+EI +   +  L+L  N +  +P E+ 
Sbjct: 222 QLTSVPAEIGQLASL----KFLHLQGNQLASVPAEIGQLTLLEGLNLESNQLTSVPAEIG 277

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
             ASL+ LILSRN++   P  I   LSSL  L L+ N L  VP++    +  L++L LSY
Sbjct: 278 QLASLKRLILSRNQLTSVPAEI-GQLSSLDGLNLERNQLTSVPAE-IGQLASLKLLHLSY 335

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           N                        QL   P +I +L  L  L L+ N L S+P   + L
Sbjct: 336 N------------------------QLTSVPAEIWQLASLEWLWLNNNELTSVPAAIREL 371



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 175/368 (47%), Gaps = 64/368 (17%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
            L   +P  +G LS L +L+L +N++ S+P+ I    SL E  +  N L+++PAE+G+L+
Sbjct: 37  GLTGAVPAELGRLSALRKLNLGRNQLTSVPAEIGQLTSLEELRLDRNQLTSVPAEIGQLT 96

Query: 93  KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
            L  L L SNQ                      L+ +P EIG++ +L    L+ N L +L
Sbjct: 97  SLEVLYLESNQ----------------------LTSVPAEIGQLASLEVFYLSRNQLTSL 134

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
                    PA +  L                    T+   LS+   +L+       ++P
Sbjct: 135 ---------PAEIGQL--------------------TLLEGLSLARNQLT-------SVP 158

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
           +EIW+   +  L L+ N +  LP E+    SL+ L L  N++   P A +  L+ L  L 
Sbjct: 159 AEIWQITALEALWLNENQLTSLPAEIGQLTSLKELGLGGNQLTSVP-ADIGQLTLLEGLS 217

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 331
           LD+N L  VP++    +  L+ L L  N +AS+P       L  L+ L L   QL   P 
Sbjct: 218 LDSNQLTSVPAE-IGQLASLKFLHLQGNQLASVPAE--IGQLTLLEGLNLESNQLTSVPA 274

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           +I +L  L+ L LS+N L S+P     L+SL  L+L  N ++++P E+G L  SL+ L L
Sbjct: 275 EIGQLASLKRLILSRNQLTSVPAEIGQLSSLDGLNLERNQLTSVPAEIGQL-ASLKLLHL 333

Query: 392 DGNPLRSI 399
             N L S+
Sbjct: 334 SYNQLTSV 341



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 117/219 (53%), Gaps = 10/219 (4%)

Query: 200 ELSLEGMNLS-AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           EL LE + L+ A+P+E+     + KL+L RN +  +P E+    SL+ L L RN++   P
Sbjct: 30  ELELEDVGLTGAVPAELGRLSALRKLNLGRNQLTSVPAEIGQLTSLEELRLDRNQLTSVP 89

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
             I   L+SL  L L++N L  VP++    +  L++  LS N + SLP       L  L+
Sbjct: 90  AEI-GQLTSLEVLYLESNQLTSVPAE-IGQLASLEVFYLSRNQLTSLPAE--IGQLTLLE 145

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L L R QL   P +I ++  L  L L++N L S+P     LTSL EL L  N ++++P 
Sbjct: 146 GLSLARNQLTSVPAEIWQITALEALWLNENQLTSLPAEIGQLTSLKELGLGGNQLTSVPA 205

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
           ++G L   L+ L LD N L S+   I   G  A LK+L 
Sbjct: 206 DIGQL-TLLEGLSLDSNQLTSVPAEI---GQLASLKFLH 240



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++E N+LT +    I     L  LI S+N L  +P  IG LS L  L+L +N++ S
Sbjct: 259 LEGLNLESNQLTSVPAE-IGQLASLKRLILSRNQLTSVPAEIGQLSSLDGLNLERNQLTS 317

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 115
           +P+ I    SL   ++  N L+++PAE+ +L+ L  L L++N+L        +LR
Sbjct: 318 VPAEIGQLASLKLLHLSYNQLTSVPAEIWQLASLEWLWLNNNELTSVPAAIRELR 372



 Score = 41.6 bits (96), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 36/64 (56%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           +N L  +P  IG L+ L  L L  N++ S+P+ I    SL   ++ NN L+++PA + +L
Sbjct: 312 RNQLTSVPAEIGQLASLKLLHLSYNQLTSVPAEIWQLASLEWLWLNNNELTSVPAAIREL 371

Query: 92  SKLG 95
              G
Sbjct: 372 RAAG 375


>gi|291231680|ref|XP_002735791.1| PREDICTED: leucine rich repeat containing 7-like [Saccoglossus
           kowalevskii]
          Length = 839

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 128/422 (30%), Positives = 205/422 (48%), Gaps = 46/422 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I++   L  L+   N +  +P+ IGSL++L  L+L  N + SIP  I     L + Y+ +
Sbjct: 165 ISNLVNLEVLMIQNNNIESLPKDIGSLTKLEVLELSYNELTSIPKEIGQLEKLKQLYLNH 224

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L ++P E+GKLS+L  L L SNQL     E   ++ L+ L L+NNSL  +P  I  + 
Sbjct: 225 NKLESIPKEMGKLSELTVLGLSSNQLTSLPSEISLMKQLTNLGLNNNSLGCIPKSICYLE 284

Query: 138 TLRKLLLTGNPLRTLRSSLVNGP-------TPALLKYLRSR---LPENEDSEASTTK-ED 186
            L KL L+GN L+TL S + N         +   ++YL  +   +P  E+   S  K +D
Sbjct: 285 QLIKLGLSGNNLQTLPSVIENWIELCDLQLSDNQIQYLPIQIYWIPNLEELNLSNNKIQD 344

Query: 187 L---ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
           +   I   T+L +    L L    L  +P EI +   +  L +  N ++E+P  + +  +
Sbjct: 345 ISCEIIKLTKLRI----LGLNNNALERLPDEICQLPNLELLGVDGNKLKEIPDLVCNLLA 400

Query: 244 LQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDNNPLRQV 281
           L+ +  S N ++  PD +                      +T++  LS L LDNN L   
Sbjct: 401 LKEIYFSNNCLESVPDDVCLLSDVEILFLGGNAMKTLPIEITNMKRLSHLTLDNNQLDHF 460

Query: 282 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
           P  G   +  +Q+L++  N I  +P      ++ HLQ L L   +++  P  I RL+ L+
Sbjct: 461 PL-GLCSLAEVQVLNIDDNDITHIP--AEIENMSHLQHLTLSNNKIQTFPLGICRLESLK 517

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIR 400
            LD+S N L+ +P   K L +L EL L+ N     P  +  L  SL+ L L GN + S+ 
Sbjct: 518 TLDVSGNDLRELPTEIKKLINLKELFLNQNKFEVFPAVVCRLH-SLEKLHLCGNGMVSVE 576

Query: 401 RT 402
            +
Sbjct: 577 ES 578



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 122/372 (32%), Positives = 187/372 (50%), Gaps = 22/372 (5%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S   L+ +P+ + +L +L  L +  N I  IP  IS   +L    + NN + +LP ++G 
Sbjct: 131 SGQCLHRIPKQVFNLEQLQCLFISNNNITYIPPEISNLVNLEVLMIQNNNIESLPKDIGS 190

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L+KL  L+L  N+L     E  QL +L  L L++N L  +P E+GK++ L  L L+ N L
Sbjct: 191 LTKLEVLELSYNELTSIPKEIGQLEKLKQLYLNHNKLESIPKEMGKLSELTVLGLSSNQL 250

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
            +L S +      +L+K L + L  N +S     K   I    +L     +L L G NL 
Sbjct: 251 TSLPSEI------SLMKQL-TNLGLNNNSLGCIPKS--ICYLEQLI----KLGLSGNNLQ 297

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +PS I    E+  L LS N IQ LP ++    +L+ L LS NKI+D    I+  L+ L 
Sbjct: 298 TLPSVIENWIELCDLQLSDNQIQYLPIQIYWIPNLEELNLSNNKIQDISCEII-KLTKLR 356

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPF-SSLPHLQELYLRRMQLRE 328
            L L+NN L ++P D    +P L++L +  N   L E P    +L  L+E+Y     L  
Sbjct: 357 ILGLNNNALERLP-DEICQLPNLELLGVDGN--KLKEIPDLVCNLLALKEIYFSNNCLES 413

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE-PSLQ 387
            P D+  L  + IL L  N+++++P    N+  L+ L L +N +   P  LGL     +Q
Sbjct: 414 VPDDVCLLSDVEILFLGGNAMKTLPIEITNMKRLSHLTLDNNQLDHFP--LGLCSLAEVQ 471

Query: 388 ALRLDGNPLRSI 399
            L +D N +  I
Sbjct: 472 VLNIDDNDITHI 483



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 196/456 (42%), Gaps = 40/456 (8%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           KL + GN L  L + +I +W  L +L  S N +  +P  I  +  L  L+L  N+I  I 
Sbjct: 288 KLGLSGNNLQTLPS-VIENWIELCDLQLSDNQIQYLPIQIYWIPNLEELNLSNNKIQDIS 346

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
             I     L    + NNAL  LP E+ +L  L  L +  N+LKE     C L  L  +  
Sbjct: 347 CEIIKLTKLRILGLNNNALERLPDEICQLPNLELLGVDGNKLKEIPDLVCNLLALKEIYF 406

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE------- 174
           SNN L  +P ++  ++ +  L L GN ++TL   + N    + L    ++L         
Sbjct: 407 SNNCLESVPDDVCLLSDVEILFLGGNAMKTLPIEITNMKRLSHLTLDNNQLDHFPLGLCS 466

Query: 175 -NEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 231
             E    +    D+  +   +   S  + L+L    +   P  I     +  LD+S N +
Sbjct: 467 LAEVQVLNIDDNDITHIPAEIENMSHLQHLTLSNNKIQTFPLGICRLESLKTLDVSGNDL 526

Query: 232 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP-SDGFKDIP 290
           +ELP E+    +L+ L L++NK + +P A++  L SL  L L  N +  V  S     + 
Sbjct: 527 RELPTEIKKLINLKELFLNQNKFEVFP-AVVCRLHSLEKLHLCGNGMVSVEESTELHHLK 585

Query: 291 MLQILDLS--------------YNIASLPENPPF-----------SSLPHLQELYLRRMQ 325
            LQ + LS               N+ +L  +  F           + L +L+ELY+    
Sbjct: 586 SLQEMHLSDNKFPHFPNELCVISNLKTLHFDQKFGCKVRLLPECIAELVNLEELYVDNNA 645

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L   P  I  L +L+ L +  N++  +PE    L +LT L L  N +  LP     L  +
Sbjct: 646 LETLPVMIGALAKLQKLSVCCNNITHLPESLCMLQNLTSLHLESNQLMKLPVRFDNL-IN 704

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
           +  LRL+ NPL    + + D G    + Y   +  E
Sbjct: 705 IADLRLEFNPLMHPPKDVCDGGILQPIAYFMQRAEE 740



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 110/227 (48%), Gaps = 27/227 (11%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           ++L G  L  IP +++   ++  L +S N+I  +PPE+S+  +L+ L++  N I+  P  
Sbjct: 128 VNLSGQCLHRIPKQVFNLEQLQCLFISNNNITYIPPEISNLVNLEVLMIQNNNIESLPKD 187

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSD---------------GFKDIPM-------LQILDLS 298
           I  SL+ L  L+L  N L  +P +                 + IP        L +L LS
Sbjct: 188 I-GSLTKLEVLELSYNELTSIPKEIGQLEKLKQLYLNHNKLESIPKEMGKLSELTVLGLS 246

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP     S +  L  L L    L   P  I  L+QL  L LS N+LQ++P   +
Sbjct: 247 SNQLTSLP--SEISLMKQLTNLGLNNNSLGCIPKSICYLEQLIKLGLSGNNLQTLPSVIE 304

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
           N   L +L LSDN I  LP ++  + P+L+ L L  N ++ I   I+
Sbjct: 305 NWIELCDLQLSDNQIQYLPIQIYWI-PNLEELNLSNNKIQDISCEII 350



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 5/183 (2%)

Query: 1   MSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN--- 56
           + KL + GN + +V  +  +     L E+  S N     P  +  +S L  L   Q    
Sbjct: 562 LEKLHLCGNGMVSVEESTELHHLKSLQEMHLSDNKFPHFPNELCVISNLKTLHFDQKFGC 621

Query: 57  RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 115
           ++  +P  I+   +L E Y+ NNAL  LP  +G L+KL  L +  N +       C L+ 
Sbjct: 622 KVRLLPECIAELVNLEELYVDNNALETLPVMIGALAKLQKLSVCCNNITHLPESLCMLQN 681

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+ L L +N L  LP     +  +  L L  NPL      + +G     + Y   R  E 
Sbjct: 682 LTSLHLESNQLMKLPVRFDNLINIADLRLEFNPLMHPPKDVCDGGILQPIAYFMQRAEER 741

Query: 176 EDS 178
           E++
Sbjct: 742 EEA 744


>gi|24215150|ref|NP_712631.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074468|ref|YP_005988785.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196220|gb|AAN49649.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458257|gb|AER02802.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 633

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 137/402 (34%), Positives = 198/402 (49%), Gaps = 21/402 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G   T L    I     L EL    N L   P  I  L +L  LDL +NR++ +P+
Sbjct: 55  LNLSGQNFTTLPKE-IEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPN 113

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  +  N L   P E+G+L  L TL+L  NQL    VE  QL+ L  L+L 
Sbjct: 114 EIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLR 173

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++  L+ L L  N L TL   +        L+ L++ L  +E+   + 
Sbjct: 174 KNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEI------GQLQNLQT-LGLSENQLTTF 226

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
            KE  I     L    +EL+L+   L+A+P EI +   +  L+LS N +   P E+    
Sbjct: 227 PKE--IGQLENL----QELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLK 280

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
            L+ L L RN++  +P  I   L +L  L L  N  + V S     +  L  L+LSYN +
Sbjct: 281 KLRDLGLGRNQLTTFPKEI-GQLKNLQMLDLCYNQFKTV-SKEIGQLKNLLQLNLSYNQL 338

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
           A+LP       L  LQ+L L R QL   P +I +L+ L  LDL  N L ++P+    L +
Sbjct: 339 ATLP--AEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKN 396

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L  L L  N ++  P E+G LE +LQ L L  N L ++ + I
Sbjct: 397 LYNLGLGRNQLATFPKEIGQLE-NLQELDLWNNRLTALPKEI 437



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 134/406 (33%), Positives = 196/406 (48%), Gaps = 23/406 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L N  I     L EL   KN L   P+ IG L  L  L+L  N++ +
Sbjct: 98  LESLDLSENRLVMLPNE-IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLAT 156

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L +  +  N L+ LP E+G+L  L TL+L  NQL    VE  QL+ L  L
Sbjct: 157 LPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTL 216

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDS 178
            LS N L+  P EIG++  L++L L  N L  L   +        LK L +  L EN+  
Sbjct: 217 GLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEI------GQLKNLENLELSENQ-- 268

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
              TT    I    +L    ++L L    L+  P EI +   +  LDL  N  + +  E+
Sbjct: 269 --LTTFPKEIGQLKKL----RDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEI 322

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
               +L  L LS N++   P A +  L  L  L L  N L  +P +    +  L  LDL 
Sbjct: 323 GQLKNLLQLNLSYNQLATLP-AEIGQLKKLQDLSLGRNQLTTLPKE-IGQLKNLYNLDLG 380

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + +LP+      L +L  L L R QL   P +I +L+ L+ LDL  N L ++P+   
Sbjct: 381 TNQLTTLPK--EIGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKEIG 438

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            L +L  L+LS+N ++  P E+G L+  LQ L L  N L  + + I
Sbjct: 439 QLKNLENLELSENQLTTFPKEIGQLK-KLQDLGLSYNRLVILPKEI 483



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 174/404 (43%), Gaps = 41/404 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  N+LT      I     L EL    N L  +P+ IG L  L  L+L +N++ +
Sbjct: 213 LQTLGLSENQLTTFPKE-IGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTT 271

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC------------ 108
            P  I     L +  +G N L+  P E+G+L  L  LDL  NQ K               
Sbjct: 272 FPKEIGQLKKLRDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQL 331

Query: 109 -----------VEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
                       E  QL+ L  L L  N L+ LP EIG++  L  L L  N L TL   +
Sbjct: 332 NLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEI 391

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                   L   R++L       A+  KE  I     L    +EL L    L+A+P EI 
Sbjct: 392 GQLKNLYNLGLGRNQL-------ATFPKE--IGQLENL----QELDLWNNRLTALPKEIG 438

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           +   +  L+LS N +   P E+     LQ L LS N++   P  I   L  L  L L  N
Sbjct: 439 QLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEI-GQLEKLQDLGLSYN 497

Query: 277 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
            L  +P +    +  LQ+LDL YN      +     L +L +L L   QL   P +I +L
Sbjct: 498 RLVILPKE-IGQLKNLQMLDLCYNQFK-TVSKEIGQLKNLLQLNLSYNQLATLPAEIGQL 555

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           + L  LDL  N L ++P+    L +L  L L  N ++ LP E+G
Sbjct: 556 KNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 599



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 122/237 (51%), Gaps = 11/237 (4%)

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
           +++  PE+E      T  DL T A +  +  + L+L G N + +P EI +   + +LDL 
Sbjct: 27  IQAEAPEDEPG----TYRDL-TEALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLG 81

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            N +   P  +     L++L LS N++   P+ I   L +L  L L  N L   P +   
Sbjct: 82  DNQLATFPAVIVELQKLESLDLSENRLVMLPNEI-GRLQNLQELGLYKNKLITFPKE-IG 139

Query: 288 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
            +  LQ L+L  N +A+LP       L +L++L LR+ +L   P +I +LQ L+ L+L  
Sbjct: 140 QLQNLQTLNLQDNQLATLP--VEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQD 197

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           N L ++P     L +L  L LS+N ++  P E+G LE +LQ L L  N L ++ + I
Sbjct: 198 NQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLE-NLQELNLKWNRLTALPKEI 253



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 2/150 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  N+L +L    I     L +L  S N L  +P+ IG L  L  LDL  N+  +
Sbjct: 466 LQDLGLSYNRLVILPKE-IGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKT 524

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +   I    +L +  +  N L+ LPAE+G+L  L  LDL +NQL     E  QL+ L  L
Sbjct: 525 VSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNL 584

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
            L  N L+ LP EIG++  L+ LLL+ NP+
Sbjct: 585 GLGTNQLTTLPKEIGQLKKLQWLLLSVNPI 614


>gi|326923993|ref|XP_003208217.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Meleagris
           gallopavo]
          Length = 582

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 196/406 (48%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SLA  Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLTSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-L 238
                         LS  S+ L L    LSAIP  + +  E+ +L+L  N+I  LP   L
Sbjct: 283 --------------LSSLSR-LGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 182/405 (44%), Gaps = 64/405 (15%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L  L  + N L  +PE IGS +++  LDL  N +L +P +I    SL+   +  
Sbjct: 234 IGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRY 293

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N LSA+P  L K S+L  L+L                       NN++S LP   G +++
Sbjct: 294 NRLSAIPKSLAKCSELDELNLE----------------------NNNISTLPE--GLLSS 329

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L KL          +S  V GP                 S+ ST                
Sbjct: 330 LVKLTSLTLARNCFQSYPVGGP-----------------SQFSTI--------------- 357

Query: 199 KELSLEGMNLSAIPSEIWEAGEI-TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             L++E   ++ IP  I+   ++ +KL++  N +  LP +  +  S+  L L+ N++   
Sbjct: 358 YSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P+ + + L SL  L L NN L+++P  G  ++  L+ LDL  N + SLP    +  L  L
Sbjct: 418 PEDV-SGLVSLEVLILSNNLLKKLP-HGIGNLRKLRELDLEENKLESLPNEIAY--LKDL 473

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISAL 375
           Q+L L   QL   P  I  L  L  L L +N L  +PE    L +L EL L+DN N+ +L
Sbjct: 474 QKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSL 533

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           P EL L    L  + ++  PL  +   I+  G   ++++LK + P
Sbjct: 534 PFELALCS-KLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGP 577



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 148/315 (46%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I S T +T L    N L  +PETIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPEE-IGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPK 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C  L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  I    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGIGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS + E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LTSLATLYLRFNRITTVEK-DIKNLSKLT 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +PE   + T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPE 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I +++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPKSL 303


>gi|418703936|ref|ZP_13264818.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410766420|gb|EKR37105.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 595

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 193/418 (46%), Gaps = 36/418 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ +
Sbjct: 165 LQKLWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLAT 223

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+ NN L+ LP E+G+L  L  L    N+L  +  E  QL+ L  L
Sbjct: 224 LPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTAFPKEMGQLKNLQTL 283

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E
Sbjct: 284 NLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAE 337

Query: 180 ASTTK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWE 217
               +       E L     RL   +               +EL L     S +P EI  
Sbjct: 338 DGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISR 397

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              +  L L  N ++++P E+    +L+ L L  N+++  P  I   L +L  L L  N 
Sbjct: 398 LKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEI-GQLRNLQRLSLHQNT 456

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
           L+  P++  + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L
Sbjct: 457 LKIFPAE-IEQLKKLQKLDLSVNQFTTFPK--EIGKLENLQTLNLQRNQLTNLPAEIEQL 513

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           + L+ LDL+ N    +P+    L  L  LDL +N ++ LP E+G L+ +LQ L L  N
Sbjct: 514 KNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ-NLQWLYLQNN 570



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 205/440 (46%), Gaps = 47/440 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L N  I     L +L   KN L   P+ IG L  L +L L +NR+ +
Sbjct: 119 LESLDLSENRLIILPNE-IGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTA 177

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    + NN  + LP E+G+L  L TL+L  NQL    VE  QL+ L  L
Sbjct: 178 LPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQEL 237

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL-----LTGNP-----LRTLRS-SLVNGPTPALLKYL 168
            L NN L+ LP EIG++  L+ L      LT  P     L+ L++ +LVN     L K +
Sbjct: 238 YLRNNRLTVLPKEIGQLQNLQMLCSPENRLTAFPKEMGQLKNLQTLNLVNNRLTVLPKEI 297

Query: 169 --------------------RSRLPE---NEDSEASTTKEDLI----TMATRLSVTSKEL 201
                               R R+ +   + + +     ED +     +A    +   +L
Sbjct: 298 GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDL 357

Query: 202 SLEGMNLSAI-PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
            L+  N S + P  I +   + +L L       LP E+S   +L+ L L  N +K  P  
Sbjct: 358 RLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSE 417

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I   L +L  L L+ N L ++P +    +  LQ L L  N +   P       L  LQ+L
Sbjct: 418 I-GQLRNLEALNLEANELERLPKE-IGQLRNLQRLSLHQNTLKIFP--AEIEQLKKLQKL 473

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            L   Q    P +I +L+ L+ L+L +N L ++P   + L +L ELDL+DN  + LP E+
Sbjct: 474 DLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEI 533

Query: 380 GLLEPSLQALRLDGNPLRSI 399
           G L+  LQ L L  N L ++
Sbjct: 534 GKLK-KLQTLDLRNNQLTTL 552



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 190/423 (44%), Gaps = 46/423 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G KLT L    I     L EL    NLL  +P+ IG L  L  LDL  N++ + P+
Sbjct: 53  LNLSGEKLTALPKE-IGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPA 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L    +  N L  LP E+G+L  L  L L+ N+L  +  E  QL+ L  L LS
Sbjct: 112 VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEAS 181
            N L+ LP EIG++  L+ L L  N    L         P  +  L++    N +D++ +
Sbjct: 172 ENRLTALPKEIGQLKNLQTLDLQNNQFTIL---------PKEIGQLQNLQTLNLQDNQLA 222

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
           T   ++  +        +EL L    L+ +P EI +   +  L    N +   P E+   
Sbjct: 223 TLPVEIGQLQ-----NLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTAFPKEMGQL 277

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-------------------LRQVP 282
            +LQTL L  N++   P  I   L +L  L+L  NP                   LR+V 
Sbjct: 278 KNLQTLNLVNNRLTVLPKEI-GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 336

Query: 283 SDG-FKDIPM-----LQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDIL 334
            DG ++++ +     L++ DL     +  +  P       +L+ELYL        P +I 
Sbjct: 337 EDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEIS 396

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           RL+ L+ L L  N L+ IP     L +L  L+L  N +  LP E+G L  +LQ L L  N
Sbjct: 397 RLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLR-NLQRLSLHQN 455

Query: 395 PLR 397
            L+
Sbjct: 456 TLK 458



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 145/289 (50%), Gaps = 29/289 (10%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS   L+ LP EIG++  L++L L  N L TL         P  +  L     
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTL---------PKEIGQL----- 93

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSR 228
             E+ +    +++   +AT  +V  +   LE ++LS      +P+EI     +  L L +
Sbjct: 94  --ENLQELDLRDN--QLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYK 149

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +   P E+    +LQ L LS N++   P  I   L +L  L L NN    +P +    
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQNNQFTILPKE-IGQ 207

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  LQ L+L  N +A+LP       L +LQELYLR  +L   P +I +LQ L++L   +N
Sbjct: 208 LQNLQTLNLQDNQLATLP--VEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPEN 265

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L + P+    L +L  L+L +N ++ LP E+G L+ +LQ L L  NPL
Sbjct: 266 RLTAFPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQ-NLQDLELLMNPL 313



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 120/229 (52%), Gaps = 8/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+ E  T ++  +T A +  +  + L+L G  L+A+P EI +   + +L+L  N +  LP
Sbjct: 30  EEVEPGTYRD--LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L L  N++  +P A++  L  L  L L  N L  +P++    +  LQ L
Sbjct: 88  KEIGQLENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IGRLQNLQDL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L  N + + P+      L +LQ+L+L   +L   P +I +L+ L+ LDL  N    +P+
Sbjct: 146 GLYKNKLTTFPK--EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L  L+L DN ++ LP E+G L+ +LQ L L  N L  + + I
Sbjct: 204 EIGQLQNLQTLNLQDNQLATLPVEIGQLQ-NLQELYLRNNRLTVLPKEI 251



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 104/254 (40%), Gaps = 37/254 (14%)

Query: 18  LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           +I  +  L EL       + +P+ I  L  L  L L  N +  IPS I    +L    + 
Sbjct: 371 VILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLE 430

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
            N L  LP E+G+L  L  L LH N LK +  E  QL+ L  LDLS N  +  P EIGK+
Sbjct: 431 ANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKL 490

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L+ L L  N L  L         PA ++ L++                          
Sbjct: 491 ENLQTLNLQRNQLTNL---------PAEIEQLKN-------------------------- 515

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             +EL L     + +P EI +  ++  LDL  N +  LP E+    +LQ L L  N+   
Sbjct: 516 -LQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSF 574

Query: 257 WPDAILTSLSSLSC 270
                +  L  L C
Sbjct: 575 EEQERIRKLLPLKC 588



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 2/128 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N L +     I     L +L  S N     P+ IG L  L  L+L +N++ +
Sbjct: 447 LQRLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTN 505

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E  + +N  + LP E+GKL KL TLDL +NQL     E  QL+ L  L
Sbjct: 506 LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 565

Query: 120 DLSNNSLS 127
            L NN  S
Sbjct: 566 YLQNNQFS 573


>gi|418693267|ref|ZP_13254330.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400356925|gb|EJP13083.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 595

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 193/418 (46%), Gaps = 36/418 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ +
Sbjct: 165 LQKLWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLAT 223

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+ NN L+ LP E+G+L  L TL    N+L     E  QL+ L  L
Sbjct: 224 LPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTL 283

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E
Sbjct: 284 NLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAE 337

Query: 180 ASTTK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWE 217
               +       E L     RL   +               +EL L     S +P EI  
Sbjct: 338 DGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISR 397

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              +  L L  N ++++P E+    +L+ L L  N+++  P  I   L +L  L L  N 
Sbjct: 398 LKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEI-GQLRNLQRLSLHQNT 456

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
           L+  P++  + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L
Sbjct: 457 LKIFPAE-IEQLKKLQKLDLSVNQFTTFPKE--IGKLENLQTLNLQRNQLTNLPAEIEQL 513

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           + L+ LDL+ N    +P+    L  L  LDL +N ++ LP E+G L+ +LQ L L  N
Sbjct: 514 KNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ-NLQWLYLQNN 570



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 205/440 (46%), Gaps = 47/440 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L N  I     L +L   KN L   P+ IG L  L +L L +NR+ +
Sbjct: 119 LESLDLSENRLIILPNE-IGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTA 177

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    + NN  + LP E+G+L  L TL+L  NQL    VE  QL+ L  L
Sbjct: 178 LPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQEL 237

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL-----LTGNP-----LRTLRS-SLVNGPTPALLKYL 168
            L NN L+ LP EIG++  L+ L      LT  P     L+ L++ +LVN     L K +
Sbjct: 238 YLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 297

Query: 169 --------------------RSRLPE---NEDSEASTTKEDLI----TMATRLSVTSKEL 201
                               R R+ +   + + +     ED +     +A    +   +L
Sbjct: 298 GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDL 357

Query: 202 SLEGMNLSAI-PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
            L+  N S + P  I +   + +L L       LP E+S   +L+ L L  N +K  P  
Sbjct: 358 RLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSE 417

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I   L +L  L L+ N L ++P +    +  LQ L L  N +   P       L  LQ+L
Sbjct: 418 I-GQLRNLEALNLEANELERLPKE-IGQLRNLQRLSLHQNTLKIFP--AEIEQLKKLQKL 473

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            L   Q    P +I +L+ L+ L+L +N L ++P   + L +L ELDL+DN  + LP E+
Sbjct: 474 DLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEI 533

Query: 380 GLLEPSLQALRLDGNPLRSI 399
           G L+  LQ L L  N L ++
Sbjct: 534 GKLK-KLQTLDLRNNQLTTL 552



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 191/423 (45%), Gaps = 46/423 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G KLT L    I     L EL    NLL  +P+ IG L  L  LDL  N++ + P+
Sbjct: 53  LNLSGEKLTALPKE-IGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPA 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L    +  N L  LP E+G+L  L  L L+ N+L  +  E  QL+ L  L LS
Sbjct: 112 VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEAS 181
            N L+ LP EIG++  L+ L L  N    L         P  +  L++    N +D++ +
Sbjct: 172 ENRLTALPKEIGQLKNLQTLDLQNNQFTIL---------PKEIGQLQNLQTLNLQDNQLA 222

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
           T   ++  +        +EL L    L+ +P EI +   +  L    N +  LP E+   
Sbjct: 223 TLPVEIGQLQ-----NLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQL 277

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-------------------LRQVP 282
            +LQTL L  N++   P  I   L +L  L+L  NP                   LR+V 
Sbjct: 278 KNLQTLNLVNNRLTVLPKEI-GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 336

Query: 283 SDG-FKDIPM-----LQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDIL 334
            DG ++++ +     L++ DL     +  +  P       +L+ELYL        P +I 
Sbjct: 337 EDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEIS 396

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           RL+ L+ L L  N L+ IP     L +L  L+L  N +  LP E+G L  +LQ L L  N
Sbjct: 397 RLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLR-NLQRLSLHQN 455

Query: 395 PLR 397
            L+
Sbjct: 456 TLK 458



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 145/289 (50%), Gaps = 29/289 (10%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS   L+ LP EIG++  L++L L  N L TL         P  +  L     
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTL---------PKEIGQL----- 93

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSR 228
             E+ +    +++   +AT  +V  +   LE ++LS      +P+EI     +  L L +
Sbjct: 94  --ENLQELDLRDN--QLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYK 149

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +   P E+    +LQ L LS N++   P  I   L +L  L L NN    +P +    
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQNNQFTILPKE-IGQ 207

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  LQ L+L  N +A+LP       L +LQELYLR  +L   P +I +LQ L+ L   +N
Sbjct: 208 LQNLQTLNLQDNQLATLP--VEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPEN 265

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L ++P+    L +L  L+L +N ++ LP E+G L+ +LQ L L  NPL
Sbjct: 266 RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQ-NLQDLELLMNPL 313



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 120/229 (52%), Gaps = 8/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+ E  T ++  +T A +  +  + L+L G  L+A+P EI +   + +L+L  N +  LP
Sbjct: 30  EEVEPGTYRD--LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L L  N++  +P A++  L  L  L L  N L  +P++    +  LQ L
Sbjct: 88  KEIGQLENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IGRLQNLQDL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L  N + + P+      L +LQ+L+L   +L   P +I +L+ L+ LDL  N    +P+
Sbjct: 146 GLYKNKLTTFPK--EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L  L+L DN ++ LP E+G L+ +LQ L L  N L  + + I
Sbjct: 204 EIGQLQNLQTLNLQDNQLATLPVEIGQLQ-NLQELYLRNNRLTVLPKEI 251



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 104/254 (40%), Gaps = 37/254 (14%)

Query: 18  LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           +I  +  L EL       + +P+ I  L  L  L L  N +  IPS I    +L    + 
Sbjct: 371 VILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLE 430

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
            N L  LP E+G+L  L  L LH N LK +  E  QL+ L  LDLS N  +  P EIGK+
Sbjct: 431 ANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKL 490

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L+ L L  N L  L         PA ++ L++                          
Sbjct: 491 ENLQTLNLQRNQLTNL---------PAEIEQLKN-------------------------- 515

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             +EL L     + +P EI +  ++  LDL  N +  LP E+    +LQ L L  N+   
Sbjct: 516 -LQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSF 574

Query: 257 WPDAILTSLSSLSC 270
                +  L  L C
Sbjct: 575 EEQERIRKLLPLKC 588



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 2/128 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N L +     I     L +L  S N     P+ IG L  L  L+L +N++ +
Sbjct: 447 LQRLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTN 505

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E  + +N  + LP E+GKL KL TLDL +NQL     E  QL+ L  L
Sbjct: 506 LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 565

Query: 120 DLSNNSLS 127
            L NN  S
Sbjct: 566 YLQNNQFS 573


>gi|418717432|ref|ZP_13277094.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787029|gb|EKR80764.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 595

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 193/418 (46%), Gaps = 36/418 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ +
Sbjct: 165 LQKLWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLAT 223

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+ NN L+ LP E+G+L  L TL    N+L     E  QL+ L  L
Sbjct: 224 LPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTL 283

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E
Sbjct: 284 NLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAE 337

Query: 180 ASTTK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWE 217
               +       E L     RL   +               +EL L     S +P EI  
Sbjct: 338 DGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISR 397

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              +  L L  N ++++P E+    +L+ L L  N+++  P  I   L +L  L L  N 
Sbjct: 398 LKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEI-GQLRNLQRLSLHQNT 456

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
           L+  P++  + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L
Sbjct: 457 LKIFPAE-IEQLKKLQKLDLSVNQFTTFPK--EIGKLENLQTLNLQRNQLTNLPAEIEQL 513

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           + L+ LDL+ N    +P+    L  L  LDL +N ++ LP E+G L+ +LQ L L  N
Sbjct: 514 KNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ-NLQWLYLQNN 570



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 205/440 (46%), Gaps = 47/440 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L N  I     L +L   KN L   P+ IG L  L +L L +NR+ +
Sbjct: 119 LESLDLSENRLIILPNE-IGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTA 177

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    + NN  + LP E+G+L  L TL+L  NQL    VE  QL+ L  L
Sbjct: 178 LPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQEL 237

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL-----LTGNP-----LRTLRS-SLVNGPTPALLKYL 168
            L NN L+ LP EIG++  L+ L      LT  P     L+ L++ +LVN     L K +
Sbjct: 238 YLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 297

Query: 169 --------------------RSRLPE---NEDSEASTTKEDLI----TMATRLSVTSKEL 201
                               R R+ +   + + +     ED +     +A    +   +L
Sbjct: 298 GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDL 357

Query: 202 SLEGMNLSAI-PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
            L+  N S + P  I +   + +L L       LP E+S   +L+ L L  N +K  P  
Sbjct: 358 RLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSE 417

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I   L +L  L L+ N L ++P +    +  LQ L L  N +   P       L  LQ+L
Sbjct: 418 I-GQLRNLEALNLEANELERLPKE-IGQLRNLQRLSLHQNTLKIFP--AEIEQLKKLQKL 473

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            L   Q    P +I +L+ L+ L+L +N L ++P   + L +L ELDL+DN  + LP E+
Sbjct: 474 DLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEI 533

Query: 380 GLLEPSLQALRLDGNPLRSI 399
           G L+  LQ L L  N L ++
Sbjct: 534 GKLK-KLQTLDLRNNQLTTL 552



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 191/423 (45%), Gaps = 46/423 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G KLT L    I     L EL    NLL  +P+ IG L  L  LDL  N++ + P+
Sbjct: 53  LNLSGEKLTALPKE-IGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPA 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L    +  N L  LP E+G+L  L  L L+ N+L  +  E  QL+ L  L LS
Sbjct: 112 VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEAS 181
            N L+ LP EIG++  L+ L L  N    L         P  +  L++    N +D++ +
Sbjct: 172 ENRLTALPKEIGQLKNLQTLDLQNNQFTIL---------PKEIGQLQNLQTLNLQDNQLA 222

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
           T   ++  +        +EL L    L+ +P EI +   +  L    N +  LP E+   
Sbjct: 223 TLPVEIGQLQ-----NLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQL 277

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-------------------LRQVP 282
            +LQTL L  N++   P  I   L +L  L+L  NP                   LR+V 
Sbjct: 278 KNLQTLNLVNNRLTVLPKEI-GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 336

Query: 283 SDG-FKDIPM-----LQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDIL 334
            DG ++++ +     L++ DL     +  +  P       +L+ELYL        P +I 
Sbjct: 337 EDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEIS 396

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           RL+ L+ L L  N L+ IP     L +L  L+L  N +  LP E+G L  +LQ L L  N
Sbjct: 397 RLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLR-NLQRLSLHQN 455

Query: 395 PLR 397
            L+
Sbjct: 456 TLK 458



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 145/289 (50%), Gaps = 29/289 (10%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS   L+ LP EIG++  L++L L  N L TL         P  +  L     
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTL---------PKEIGQL----- 93

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSR 228
             E+ +    +++   +AT  +V  +   LE ++LS      +P+EI     +  L L +
Sbjct: 94  --ENLQELDLRDN--QLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYK 149

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +   P E+    +LQ L LS N++   P  I   L +L  L L NN    +P +    
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQNNQFTILPKE-IGQ 207

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  LQ L+L  N +A+LP       L +LQELYLR  +L   P +I +LQ L+ L   +N
Sbjct: 208 LQNLQTLNLQDNQLATLP--VEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPEN 265

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L ++P+    L +L  L+L +N ++ LP E+G L+ +LQ L L  NPL
Sbjct: 266 RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQ-NLQDLELLMNPL 313



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 120/229 (52%), Gaps = 8/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+ E  T ++  +T A +  +  + L+L G  L+A+P EI +   + +L+L  N +  LP
Sbjct: 30  EEVEPGTYRD--LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L L  N++  +P A++  L  L  L L  N L  +P++    +  LQ L
Sbjct: 88  KEIGQLENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IGRLQNLQDL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L  N + + P+      L +LQ+L+L   +L   P +I +L+ L+ LDL  N    +P+
Sbjct: 146 GLYKNKLTTFPK--EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L  L+L DN ++ LP E+G L+ +LQ L L  N L  + + I
Sbjct: 204 EIGQLQNLQTLNLQDNQLATLPVEIGQLQ-NLQELYLRNNRLTVLPKEI 251



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 104/254 (40%), Gaps = 37/254 (14%)

Query: 18  LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           +I  +  L EL       + +P+ I  L  L  L L  N +  IPS I    +L    + 
Sbjct: 371 VILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLE 430

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
            N L  LP E+G+L  L  L LH N LK +  E  QL+ L  LDLS N  +  P EIGK+
Sbjct: 431 ANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKL 490

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L+ L L  N L  L         PA ++ L++                          
Sbjct: 491 ENLQTLNLQRNQLTNL---------PAEIEQLKN-------------------------- 515

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             +EL L     + +P EI +  ++  LDL  N +  LP E+    +LQ L L  N+   
Sbjct: 516 -LQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSF 574

Query: 257 WPDAILTSLSSLSC 270
                +  L  L C
Sbjct: 575 EEQERIRKLLPLKC 588



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 2/128 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N L +     I     L +L  S N     P+ IG L  L  L+L +N++ +
Sbjct: 447 LQRLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTN 505

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E  + +N  + LP E+GKL KL TLDL +NQL     E  QL+ L  L
Sbjct: 506 LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 565

Query: 120 DLSNNSLS 127
            L NN  S
Sbjct: 566 YLQNNQFS 573


>gi|260788670|ref|XP_002589372.1| hypothetical protein BRAFLDRAFT_217926 [Branchiostoma floridae]
 gi|229274549|gb|EEN45383.1| hypothetical protein BRAFLDRAFT_217926 [Branchiostoma floridae]
          Length = 445

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 196/441 (44%), Gaps = 41/441 (9%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           KLD+    LT +    +   T L  L  S N L  +PE +G L +L RLD   N + S+P
Sbjct: 17  KLDLSNQGLTSIPEE-VFDITDLEFLDVSNNKLTSIPEAVGRLQKLYRLDADYNTLTSLP 75

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
            +I     L   Y+ +N LS LP  + KL KL  L + +NQL  +    C L  L VL++
Sbjct: 76  QAIGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFPSGVCSLPNLEVLEV 135

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
           S N L   PP + K+  LR L + GN L  +   +               LP  E    S
Sbjct: 136 SYNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPGV-------------CLLPNLEVLSVS 182

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
             K              +EL + G  L+ +PS +     +  L +  N++   PP +   
Sbjct: 183 NNKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNNNLSTFPPGVEKL 242

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD---------------GF 286
             ++ L +  N++ + P  +   L +L  L +  NP+R++P+D                F
Sbjct: 243 QKVRELYIYGNQLTEVPSGVCL-LPNLEVLSVGMNPIRRLPNDVTRLARLKTLSVPGCQF 301

Query: 287 KDIP--MLQILDLSYNIASLPENPPFSSLP----HLQELYLRRMQ---LREAPTDILRLQ 337
            + P  +L +  L    A       F  +P    +LQ L+L  ++   LR  P+ +  L 
Sbjct: 302 DEFPRQVLHLKTLEELYAGQNGGRKFDMVPDEVGNLQHLWLLSLEYNLLRTLPSTMSHLH 361

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
            LR++ L  N   + PE    L ++ +LD+ +NNI+ L   L   +  L+ L + GNPL 
Sbjct: 362 NLRVVQLPNNKFDTFPEVLCELPAMEKLDIRNNNITRLLTALHRAD-KLRDLDVSGNPLT 420

Query: 398 SIRRTILDRGTKAVLKYLKDK 418
              + + ++GT A++ +LK +
Sbjct: 421 YPPQDVCEQGTGAIMAFLKQE 441


>gi|255073607|ref|XP_002500478.1| predicted protein [Micromonas sp. RCC299]
 gi|226515741|gb|ACO61736.1| predicted protein [Micromonas sp. RCC299]
          Length = 383

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 177/370 (47%), Gaps = 42/370 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L +L    N L  +P  IG L+ L  L+L  N + S+P  I    SL   Y+G N L+++
Sbjct: 31  LMDLNLGGNQLTLLPAEIGQLASLESLELGYNELTSVPVEIWQLASLEGLYLGGNQLTSV 90

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           PAE+G+L+ L  L L +N+L     E  QL  L+ LDL +N L+ +P EI ++T+L  L 
Sbjct: 91  PAEIGQLTSLEDLSLEANRLTSVPTEIGQLTSLTQLDLRDNQLTSVPAEIWRLTSLTYLN 150

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L ++         PA ++ L S                            +EL L
Sbjct: 151 LNDNQLTSV---------PAEIRQLTSL---------------------------RELWL 174

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
              +L+++P+EIW+   + KL ++ N +  +P E+    SL  L L  N++   P A + 
Sbjct: 175 SANHLTSVPAEIWQLAALVKLSVTENQLTSVPAEIWQLTSLTELYLHGNQLTSVP-AEIG 233

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
            L+SL+ L L +N L  VP++    I  L  L L  N + SLP       L  L E  L 
Sbjct: 234 QLTSLTALSLYDNQLTSVPAE-IGQIRSLVKLSLHGNRLTSLP--AEIGQLRALVEFELD 290

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
           R  L   P +I  L  L  L L  N L S+P     LTSL EL LS N ++++P  +  L
Sbjct: 291 RNLLTSVPAEIGHLTSLTELSLHGNQLTSVPSEIGQLTSLGELSLSGNQLTSVPAAMREL 350

Query: 383 EPSLQALRLD 392
           E +   + LD
Sbjct: 351 EAAGCYMDLD 360



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 145/285 (50%), Gaps = 18/285 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L + GN+LT +    I   T L +L    N L  +P  IG L+ L +LDL  N++ S
Sbjct: 77  LEGLYLGGNQLTSVPAE-IGQLTSLEDLSLEANRLTSVPTEIGQLTSLTQLDLRDNQLTS 135

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-L 119
           +P+ I    SL    + +N L+++PAE+ +L+ L  L L +N L     E  QL   V L
Sbjct: 136 VPAEIWRLTSLTYLNLNDNQLTSVPAEIRQLTSLRELWLSANHLTSVPAEIWQLAALVKL 195

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDS 178
            ++ N L+ +P EI ++T+L +L L GN L ++         PA +  L S    +  D+
Sbjct: 196 SVTENQLTSVPAEIWQLTSLTELYLHGNQLTSV---------PAEIGQLTSLTALSLYDN 246

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           + ++   ++  + + +     +LSL G  L+++P+EI +   + + +L RN +  +P E+
Sbjct: 247 QLTSVPAEIGQIRSLV-----KLSLHGNRLTSLPAEIGQLRALVEFELDRNLLTSVPAEI 301

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
               SL  L L  N++   P  I   L+SL  L L  N L  VP+
Sbjct: 302 GHLTSLTELSLHGNQLTSVPSEI-GQLTSLGELSLSGNQLTSVPA 345



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 116/239 (48%), Gaps = 38/239 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L++  N+LT +    I   T L EL  S N L  +P  I  L+ L++L + +N++ S
Sbjct: 146 LTYLNLNDNQLTSVPAE-IRQLTSLRELWLSANHLTSVPAEIWQLAALVKLSVTENQLTS 204

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    SL E Y+  N L+++PAE+G+L+ L  L L+ NQL     E  Q+R L  L
Sbjct: 205 VPAEIWQLTSLTELYLHGNQLTSVPAEIGQLTSLTALSLYDNQLTSVPAEIGQIRSLVKL 264

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N L+ LP EIG++  L +  L  N L ++         PA + +L S         
Sbjct: 265 SLHGNRLTSLPAEIGQLRALVEFELDRNLLTSV---------PAEIGHLTSL-------- 307

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                               ELSL G  L+++PSEI +   + +L LS N +  +P  +
Sbjct: 308 -------------------TELSLHGNQLTSVPSEIGQLTSLGELSLSGNQLTSVPAAM 347


>gi|418755319|ref|ZP_13311526.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964330|gb|EKO32220.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 492

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 122/378 (32%), Positives = 184/378 (48%), Gaps = 41/378 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  S N L  +P+ IG L  L +L+L +NR+ ++P  I    +L E ++ +
Sbjct: 131 IGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTD 190

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP E+ KL  L  L L++NQL     E  +L +L  L L NN L+ LP EIGK+ 
Sbjct: 191 NQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQ 250

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L+ L L+ N L TL   +        L++L+                            
Sbjct: 251 NLQWLGLSNNQLTTLPKEI------GKLQHLQ---------------------------- 276

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             EL LE   L+ +P EI +   + +L L  N +  LP E+     L+ L  S N+    
Sbjct: 277 --ELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTV 334

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P+ I  +L +L  L L +N L  +P +      +  +      +A+LP+      L +LQ
Sbjct: 335 PEEIW-NLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKE--IGKLQNLQ 391

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            LYL   QL   P +I +LQ L+ L LS N L ++P+  +NL SL  L LSDN +++ P 
Sbjct: 392 LLYLSDNQLTTLPKEIGKLQNLQELYLSDNQLATLPKEIENLQSLEYLYLSDNPLTSFPE 451

Query: 378 ELGLLEPSLQALRLDGNP 395
           E+G L+  L+ LRL+  P
Sbjct: 452 EIGKLQ-HLKWLRLENIP 468



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 131/393 (33%), Positives = 178/393 (45%), Gaps = 43/393 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+L  L    I     L +L  ++N L  +PE IG L  L  L L  N++ ++P 
Sbjct: 140 LDLSSNQLMTLPKE-IGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLPK 198

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    + NN L+ LP E+GKL KL  L L +NQL     E  +L+ L  L LS
Sbjct: 199 EIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLS 258

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN L+ LP EIGK+  L++L L  N L TL         P  +  L++      D    T
Sbjct: 259 NNQLTTLPKEIGKLQHLQELHLENNQLTTL---------PKEIGKLQNLQELRLDYNRLT 309

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
           T  + I    +L    K+L   G   + +P EIW    +  L+L  N +  LP E+ +  
Sbjct: 310 TLPEEIEKLQKL----KKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQ 365

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           +LQ L LS N++   P  I   L +L  L L +N L  +P    K+I  LQ         
Sbjct: 366 NLQLLYLSDNQLATLPKEI-GKLQNLQLLYLSDNQLTTLP----KEIGKLQ--------- 411

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
                       +LQELYL   QL   P +I  LQ L  L LS N L S PE    L  L
Sbjct: 412 ------------NLQELYLSDNQLATLPKEIENLQSLEYLYLSDNPLTSFPEEIGKLQHL 459

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
             L L   NI  L P+   +   L  + +D  P
Sbjct: 460 KWLRLE--NIPTLLPQKEKIRKLLPNVTIDFGP 490



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/328 (34%), Positives = 160/328 (48%), Gaps = 43/328 (13%)

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           N+ L  LP E+GKL  L  LDL SNQL     E  +L+ L  L+L+ N L+ LP EIGK+
Sbjct: 121 NDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKL 180

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L++L LT N L TL         P  ++ L++                          
Sbjct: 181 QNLQELHLTDNQLTTL---------PKEIEKLQNL------------------------- 206

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             + L L    L+ +P EI +  ++  L L  N +  LP E+    +LQ L LS N++  
Sbjct: 207 --QWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTT 264

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
            P  I   L  L  L L+NN L  +P +  K +  LQ L L YN + +LPE      L  
Sbjct: 265 LPKEI-GKLQHLQELHLENNQLTTLPKEIGK-LQNLQELRLDYNRLTTLPEE--IEKLQK 320

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           L++LY    Q    P +I  LQ L+ L+L  N L S+P+   NL +L  L LSDN ++ L
Sbjct: 321 LKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATL 380

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P E+G L+ +LQ L L  N L ++ + I
Sbjct: 381 PKEIGKLQ-NLQLLYLSDNQLTTLPKEI 407


>gi|327266826|ref|XP_003218205.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like [Anolis carolinensis]
          Length = 612

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 182/416 (43%), Gaps = 74/416 (17%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N LT L   ++ + T LTE+    N     P+ +  L  L  +DL +N + SIP  I   
Sbjct: 193 NNLTCLPKEVV-NMTKLTEIYLKSNKFENFPQELCHLYNLEIIDLEKNELNSIPEEICSL 251

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSG 128
             LA+F++  N+L+A+P  L K SKL                      S+LDLSNN L  
Sbjct: 252 KRLAQFFIAYNSLTAVPDTLSKCSKL----------------------SILDLSNNLLHK 289

Query: 129 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 188
           LP  + ++T +++  L+GNPL            P  ++  RS                LI
Sbjct: 290 LPRSLKELTEIKEFGLSGNPLANF---------PRQIRRWRS----------------LI 324

Query: 189 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 248
            +            L+   L  +   + +   +  LDLS N +   P E+ +  +L+ L 
Sbjct: 325 VVY-----------LKNCTLQMVHPSLAKLTNMMILDLSENLLDTFPREICTMENLEVLA 373

Query: 249 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY-------NI 301
           L  N+I + P  +   LS L CL L +N     P + F     LQ L+  Y        +
Sbjct: 374 LDDNQITEVPPEV-HRLSRLKCLGLTSNRFAWFPEEIFH----LQSLEKLYMGQDKGTKL 428

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
           A LPEN   S L +L+ELYL +  L   PT I  L  L ILD   N L  +P+    L  
Sbjct: 429 ADLPEN--ISQLQNLKELYLEKNDLEYLPTSIGLLNNLEILDCHNNFLIELPDSICRLQG 486

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           L +L L  N +  LP  L  LE  LQ L L+GNPL      +   G  A+ +YLKD
Sbjct: 487 LQKLLLHSNQLFQLPENLDSLE-KLQVLSLEGNPLMDPPVEVFSEGLPAIWQYLKD 541



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 26/242 (10%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           +EL LE   + +IP  I +   +  L L++N+I  L  E      LQ L LS N +    
Sbjct: 92  EELHLERNMIESIPESIDQLKNVKVLYLNKNNIGTLCKEFGELKCLQNLDLSNNPLSCDS 151

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY-NIASLPENPPFSSLPHLQ 317
             I++ L +L  L+L +  L + P +  K +  L++L LS  N+  LP+     ++  L 
Sbjct: 152 LNIVSKLRALCQLRLYDVNLDEFPVEICKHLHHLKLLGLSTNNLTCLPKE--VVNMTKLT 209

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP- 376
           E+YL+  +    P ++  L  L I+DL +N L SIPE   +L  L +  ++ N+++A+P 
Sbjct: 210 EIYLKSNKFENFPQELCHLYNLEIIDLEKNELNSIPEEICSLKRLAQFFIAYNSLTAVPD 269

Query: 377 -----PELGLLEPS----------------LQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
                 +L +L+ S                ++   L GNPL +  R I  R    ++ YL
Sbjct: 270 TLSKCSKLSILDLSNNLLHKLPRSLKELTEIKEFGLSGNPLANFPRQI-RRWRSLIVVYL 328

Query: 416 KD 417
           K+
Sbjct: 329 KN 330



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 1/105 (0%)

Query: 7   EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 66
           +G KL  L  N I+    L EL   KN L  +P +IG L+ L  LD H N ++ +P SI 
Sbjct: 424 KGTKLADLPEN-ISQLQNLKELYLEKNDLEYLPTSIGLLNNLEILDCHNNFLIELPDSIC 482

Query: 67  GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 111
               L +  + +N L  LP  L  L KL  L L  N L +  VE 
Sbjct: 483 RLQGLQKLLLHSNQLFQLPENLDSLEKLQVLSLEGNPLMDPPVEV 527



 Score = 42.4 bits (98), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
           +L   P  +  L+ L  L L +N ++SIPE    L ++  L L+ NNI  L  E G L+ 
Sbjct: 77  KLTAIPCQVFDLKDLEELHLERNMIESIPESIDQLKNVKVLYLNKNNIGTLCKEFGELK- 135

Query: 385 SLQALRLDGNPL 396
            LQ L L  NPL
Sbjct: 136 CLQNLDLSNNPL 147



 Score = 38.1 bits (87), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 38/62 (61%)

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  L+EL+L R  +   P  I +L+ +++L L++N++ ++ + F  L  L  LDLS+N +
Sbjct: 88  LKDLEELHLERNMIESIPESIDQLKNVKVLYLNKNNIGTLCKEFGELKCLQNLDLSNNPL 147

Query: 373 SA 374
           S 
Sbjct: 148 SC 149


>gi|428297417|ref|YP_007135723.1| adenylate cyclase [Calothrix sp. PCC 6303]
 gi|428233961|gb|AFY99750.1| Adenylate cyclase [Calothrix sp. PCC 6303]
          Length = 1034

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 183/363 (50%), Gaps = 42/363 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I + T LT+L  ++N L+ +PE  G+L+ L  L L  N++ ++P +     SL    + N
Sbjct: 35  IGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSANQLNALPEAFGNLTSLRYLKLNN 94

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++ALP  +G L+ L +LDL +NQL         L  L+ LDL++N L+GLP  +G +T
Sbjct: 95  NQINALPESIGNLTSLTSLDLSANQLNALPEAFGNLTSLTFLDLNSNPLTGLPDSVGNLT 154

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +L+ L L  N L+ L  S  N                             +T  T L ++
Sbjct: 155 SLKHLYLNNNQLKALPDSAGN-----------------------------LTSLTFLDLS 185

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             +L+       A+P        +T L LS N I  LP  + +  +L+ L L  N++   
Sbjct: 186 ENQLN-------ALPEAFGNLSSLTYLYLSGNQINALPESIGNLTNLRYLYLWNNQLNTL 238

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P++I+ +L++L+ L L  N L  +P + F ++  L  L LS N + +LPE   F +L  L
Sbjct: 239 PESIV-NLTNLTDLYLSENQLNALP-ETFGNLSSLTDLYLSGNQLNALPET--FGNLSSL 294

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             LYL   QL   P  I +L +L+ L L  N L ++P+    LT L +LD+ +N++  LP
Sbjct: 295 TYLYLNSNQLTGLPESIGQLNKLKELILYDNKLLTLPQELTKLTQLKKLDIRNNDLGELP 354

Query: 377 PEL 379
           PE+
Sbjct: 355 PEV 357



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 160/344 (46%), Gaps = 64/344 (18%)

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +PS I    SL + Y+  N LS LP   G L+ L  L L +NQ                 
Sbjct: 31  LPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSANQ----------------- 73

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
                L+ LP   G +T+LR L L  N +  L  S+ N                      
Sbjct: 74  -----LNALPEAFGNLTSLRYLKLNNNQINALPESIGN---------------------- 106

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                  +T  T L +++ +L+       A+P        +T LDL+ N +  LP  + +
Sbjct: 107 -------LTSLTSLDLSANQLN-------ALPEAFGNLTSLTFLDLNSNPLTGLPDSVGN 152

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             SL+ L L+ N++K  PD+   +L+SL+ L L  N L  +P + F ++  L  L LS N
Sbjct: 153 LTSLKHLYLNNNQLKALPDSA-GNLTSLTFLDLSENQLNALP-EAFGNLSSLTYLYLSGN 210

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            I +LPE+    +L +L+ LYL   QL   P  I+ L  L  L LS+N L ++PE F NL
Sbjct: 211 QINALPES--IGNLTNLRYLYLWNNQLNTLPESIVNLTNLTDLYLSENQLNALPETFGNL 268

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           +SLT+L LS N ++ALP   G L  SL  L L+ N L  +  +I
Sbjct: 269 SSLTDLYLSGNQLNALPETFGNLS-SLTYLYLNSNQLTGLPESI 311



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/243 (37%), Positives = 130/243 (53%), Gaps = 27/243 (11%)

Query: 185 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 244
           ++LI  A +     KEL+L GM+LS +PSEI     +T L L+RN +  LP    +  SL
Sbjct: 7   QNLIAQAAKEQW--KELNLSGMDLSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSL 64

Query: 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 303
             L LS N++   P+A   +L+SL  LKL+NN +  +P +   ++  L  LDLS N + +
Sbjct: 65  THLYLSANQLNALPEA-FGNLTSLRYLKLNNNQINALP-ESIGNLTSLTSLDLSANQLNA 122

Query: 304 LPE--------------NPPFSSLPH-------LQELYLRRMQLREAPTDILRLQQLRIL 342
           LPE              + P + LP        L+ LYL   QL+  P     L  L  L
Sbjct: 123 LPEAFGNLTSLTFLDLNSNPLTGLPDSVGNLTSLKHLYLNNNQLKALPDSAGNLTSLTFL 182

Query: 343 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRT 402
           DLS+N L ++PE F NL+SLT L LS N I+ALP  +G L  +L+ L L  N L ++  +
Sbjct: 183 DLSENQLNALPEAFGNLSSLTYLYLSGNQINALPESIGNLT-NLRYLYLWNNQLNTLPES 241

Query: 403 ILD 405
           I++
Sbjct: 242 IVN 244



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 71/121 (58%), Gaps = 1/121 (0%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I + T LT+L  S+N LN +PET G+LS L  L L  N++ ++P +     SL   Y+ +
Sbjct: 242 IVNLTNLTDLYLSENQLNALPETFGNLSSLTDLYLSGNQLNALPETFGNLSSLTYLYLNS 301

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP  +G+L+KL  L L+ N+L     E  +L +L  LD+ NN L  LPPE+ +  
Sbjct: 302 NQLTGLPESIGQLNKLKELILYDNKLLTLPQELTKLTQLKKLDIRNNDLGELPPEVKRKY 361

Query: 138 T 138
           T
Sbjct: 362 T 362



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           +Q + L+LS   L  +P    NLTSLT+L L+ N +S LP   G L  SL  L L  N L
Sbjct: 16  EQWKELNLSGMDLSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLT-SLTHLYLSANQL 74

Query: 397 RSIRRTILDRGTKAVLKYLK 416
            ++       G    L+YLK
Sbjct: 75  NALPEAF---GNLTSLRYLK 91


>gi|387016708|gb|AFJ50473.1| Leucine-rich repeat protein SHOC-2-like [Crotalus adamanteus]
          Length = 582

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 197/406 (48%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L + GNKL  L    +     L  L  S+N L  +P+++G+L +L  +DL  N++  
Sbjct: 125 LTELYLYGNKLQSLPAE-VGCLVNLETLALSENSLTSLPDSLGNLKQLRMVDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  +    SL   Y+  N ++++  ++  LS L  L +  N++K+   E  +L  L  L
Sbjct: 184 IPPVVYRLTSLTTLYLRFNRITSVEKDIKNLSNLTMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T + KL L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS T K L L    LSAIP  + +  ++ +L+L  N I  LP  L 
Sbjct: 283 --------------LS-TLKSLGLRYNRLSAIPRTLAQCSKLDELNLENNIISTLPEGLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS  +L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVNLTSLTLARNCFQSYPVGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+++P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRNLPHGIG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L   LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLR-DLQRLILTNNQLSTLPRGI 490



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 115/207 (55%), Gaps = 6/207 (2%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS + E  ++T+L L  N +Q LP E+    +L+TL LS N +   
Sbjct: 102 SVRLDLAKRSIHLLPSSVKELTQLTELYLYGNKLQSLPAEVGCLVNLETLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           PD+ L +L  L  + L +N LR++P   ++ +  L  L L +N I S+ ++    +L +L
Sbjct: 162 PDS-LGNLKQLRMVDLRHNKLREIPPVVYR-LTSLTTLYLRFNRITSVEKD--IKNLSNL 217

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T+LDL  N +  LP
Sbjct: 218 TMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLP 277

Query: 377 PELGLLEPSLQALRLDGNPLRSIRRTI 403
             +G L  +L++L L  N L +I RT+
Sbjct: 278 DTIGNLS-TLKSLGLRYNRLSAIPRTL 303



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  +G L KL  LDL  N+L+    E   LR L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLRNLPHGIGNLRKLRELDLEENKLESLPNEIAYLRDLQRLILT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN LS LP  IG +  L  L L  N L  L
Sbjct: 480 NNQLSTLPRGIGHLINLTHLGLGENFLTQL 509


>gi|301627568|ref|XP_002942945.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Xenopus
           (Silurana) tropicalis]
          Length = 582

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 197/406 (48%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L + GNKL  L    +     L +L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 ITELYLYGNKLQSLPAE-VGCLVNLVKLALSENSLTSLPDSLDNLKKLCMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP+ +    SL   ++  N ++A+  ++  LSKL  L +  N++K    E  +L  L  L
Sbjct: 184 IPAVVYRLSSLTTLFLRFNRITAVEKDIKTLSKLTMLSIRENKIKHLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                  L +++         L L    LSA+P  + +  E+ +L+L  N+I  LP  L 
Sbjct: 283 -------LCSLS--------RLGLRYNRLSAVPRSLAKCSELDELNLENNNISTLPEGLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   + +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKVNSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  + +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSIEVLILSNNLLKKLPHGIG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 178/401 (44%), Gaps = 64/401 (15%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L  L  + N L  +P+ IG+ +++  LDL  N +L +P +I   CSL+   +  
Sbjct: 234 IGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLCSLSRLGLRY 293

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N LSA+P  L K S+L                        L+L NN++S LP        
Sbjct: 294 NRLSAVPRSLAKCSELDE----------------------LNLENNNISTLP-------- 323

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
                        L SSLV   +  L +      P    S+ ST                
Sbjct: 324 -----------EGLLSSLVKVNSLTLARNCFQSYPVGGPSQFSTI--------------- 357

Query: 199 KELSLEGMNLSAIPSEIWEAGEI-TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             L++E   ++ IP  I+   ++ +KL++  N +  LP +  +  S+  L L+ N++   
Sbjct: 358 YSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P+ + + L S+  L L NN L+++P  G  ++  L+ LDL  N + SLP    +  L  L
Sbjct: 418 PEDV-SGLVSIEVLILSNNLLKKLPH-GIGNLRKLRELDLEENKLESLPNEIAY--LKDL 473

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISAL 375
           Q+L L   QL   P  I  L  L  L L +N L  +PE    L +L EL L+DN N+ +L
Sbjct: 474 QKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSL 533

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
           P EL L    L  + ++  PL  +   I+  G   ++++LK
Sbjct: 534 PFELALCS-KLSIMSIENCPLSHLPPQIVAGGPSFIIQFLK 573



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  S+    + NN L  LP  +G L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 509


>gi|348522608|ref|XP_003448816.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Oreochromis niloticus]
          Length = 597

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 228/457 (49%), Gaps = 70/457 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++LDV  N+L  L ++       L ++    N L+G+P+++  L+ +  LD   N++  
Sbjct: 173 LTELDVSSNQLKSLPSS-FGCLVSLQKVNLCHNQLSGLPDSLARLTNVKLLDCSDNQLTE 231

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSK--LGTLDLHSNQLKEYCVE--ACQLRL 116
           IP+S+S   +L + Y+ +N L  LP    KL    L  L + +NQ+++   E  +C   +
Sbjct: 232 IPASLSEMLALEQLYLRHNKLRLLP----KLPAPALKELYVGNNQIEQLQTEQLSCLSAI 287

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLT-----------------------GNPLRTLR 153
           S+L+L NN +  +P EI  ++TL +L LT                       GNPLR +R
Sbjct: 288 SLLELRNNKIKIVPEEITLLSTLTRLDLTNNDITSLPASLSLLPNLNVLLLEGNPLRGIR 347

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV----TSKELSLEGMNLS 209
             +++  T  LLKYLR R+ E  +         ++    R++V    T K L+       
Sbjct: 348 RDILSKGTGELLKYLRGRVKEEPEKTDGGDTAMMLPSQARVNVHDIKTLKLLAYSDKQAG 407

Query: 210 AIPSEIWEAG---EITKLDLSRNSIQELPPEL-SSCASLQTLILSRNK-IKDWPDAILTS 264
           +IP E+++A     I  ++ S+N +  +PP L    +SL  + L  N+ I   PD  +  
Sbjct: 408 SIPEELFDAAADQSIATVNFSKNQLTSVPPRLLEFQSSLSEINLGFNRLISCSPD--ICK 465

Query: 265 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRM 324
           L  L+ + L NN L  +PS+  +++  L+ + L YN         F S P +  LY    
Sbjct: 466 LLQLTHIDLRNNQLSDLPSE-MQNLTKLRSIILIYN--------RFKSFPDV--LY---- 510

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLE 383
                  + L L+ +    L+ N +  + P     LT L+ LDL++N++  +PPELGL  
Sbjct: 511 -------ETLSLETIL---LANNQVCEVDPSRLMKLTHLSTLDLANNDLLNIPPELGLCT 560

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            +L+ L L+GNP R+ R  I+ +GT A+++YL+ +IP
Sbjct: 561 -TLRCLSLEGNPFRTPRAAIVAKGTDALMEYLRSRIP 596



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 162/308 (52%), Gaps = 45/308 (14%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L+ LDL +N LS LP  +G++  L++L L+ N L +L   +        L+ LRS     
Sbjct: 104 LTTLDLHDNQLSSLPSALGELQNLQQLRLSHNQLHSLPVEMCT------LENLRS----- 152

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                    L+L+   L  +P ++ +   +T+LD+S N ++ LP
Sbjct: 153 -------------------------LTLQQNLLENLPEDLGQLVNLTELDVSSNQLKSLP 187

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
                  SLQ + L  N++   PD+ L  L+++  L   +N L ++P+    ++  L+ L
Sbjct: 188 SSFGCLVSLQKVNLCHNQLSGLPDS-LARLTNVKLLDCSDNQLTEIPA-SLSEMLALEQL 245

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            L +N +  LP+ P     P L+ELY+   Q+ +  T+ L  L  + +L+L  N ++ +P
Sbjct: 246 YLRHNKLRLLPKLPA----PALKELYVGNNQIEQLQTEQLSCLSAISLLELRNNKIKIVP 301

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           E    L++LT LDL++N+I++LP  L LL  +L  L L+GNPLR IRR IL +GT  +LK
Sbjct: 302 EEITLLSTLTRLDLTNNDITSLPASLSLLP-NLNVLLLEGNPLRGIRRDILSKGTGELLK 360

Query: 414 YLKDKIPE 421
           YL+ ++ E
Sbjct: 361 YLRGRVKE 368



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 133/266 (50%), Gaps = 20/266 (7%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T LT+L+ S N +  + + I  L  L  LDLH N++ S+PS++    +L +  + +N
Sbjct: 76  WEQTDLTKLLLSSNQITLLSDDIRLLPGLTTLDLHDNQLSSLPSALGELQNLQQLRLSHN 135

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 138
            L +LP E+  L  L +L L  N L+    +  QL  L+ LD+S+N L  LP   G + +
Sbjct: 136 QLHSLPVEMCTLENLRSLTLQQNLLENLPEDLGQLVNLTELDVSSNQLKSLPSSFGCLVS 195

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L+K+ L  N L  L  SL       LL        +N+ +E   +  +++ +        
Sbjct: 196 LQKVNLCHNQLSGLPDSLARLTNVKLLD-----CSDNQLTEIPASLSEMLAL-------- 242

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDW 257
           ++L L    L  +P     A  + +L +  N I++L  E  SC S  +L+ L  NKIK  
Sbjct: 243 EQLYLRHNKLRLLPK--LPAPALKELYVGNNQIEQLQTEQLSCLSAISLLELRNNKIKIV 300

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPS 283
           P+ I T LS+L+ L L NN +  +P+
Sbjct: 301 PEEI-TLLSTLTRLDLTNNDITSLPA 325



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 4/118 (3%)

Query: 283 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           SD  + +P L  LDL  N ++SLP       L +LQ+L L   QL   P ++  L+ LR 
Sbjct: 95  SDDIRLLPGLTTLDLHDNQLSSLPS--ALGELQNLQQLRLSHNQLHSLPVEMCTLENLRS 152

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L L QN L+++PE    L +LTELD+S N + +LP   G L  SLQ + L  N L  +
Sbjct: 153 LTLQQNLLENLPEDLGQLVNLTELDVSSNQLKSLPSSFGCL-VSLQKVNLCHNQLSGL 209


>gi|359683929|ref|ZP_09253930.1| hypothetical protein Lsan2_04281 [Leptospira santarosai str.
           2000030832]
          Length = 504

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 133/384 (34%), Positives = 204/384 (53%), Gaps = 18/384 (4%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +P+ IG+L  L  L+L+ N+  ++P  I     L    + +N L+ LP E+G L 
Sbjct: 115 NKLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQ 174

Query: 93  KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
           KL TLDL  NQLK    E  +L +L  L L NN L+ LP EI K+  L  L L  N L T
Sbjct: 175 KLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIEKLQKLEALHLGNNELTT 234

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA-TRLSVTSKEL----SLEGM 206
           L   + N      L    ++     +   +  K   +++A +RL+   KE+    +L+ +
Sbjct: 235 LPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQEL 294

Query: 207 NLSA-----IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
           NL++     +P EI    ++ KLDL+ + +  LP E+     LQ L L++N++K  P  I
Sbjct: 295 NLNSNQFTTLPEEIGNLQKLQKLDLNYSQLTTLPKEIGKLQKLQKLSLAQNQLKTLPKEI 354

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 320
              L +L  L L +N L  +P +   ++  L+ LDL  N + +LPE     +L  LQEL+
Sbjct: 355 -GKLQNLKNLSLSHNELTTLPKE-IGNLQNLKELDLGGNQLTTLPEK--IGNLQKLQELF 410

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L   +L+  P +I  LQ L+ L+L+ N L ++P+   NL SL  L+LS N++++ P E+G
Sbjct: 411 LAGNRLKTLPKEIGNLQNLQTLNLNNNQLTTLPKEIGNLQSLESLNLSGNSLTSFPEEIG 470

Query: 381 LLEPSLQALRLDGNP-LRSIRRTI 403
            L+  L+ L L GNP LRS    I
Sbjct: 471 KLQ-KLKWLYLGGNPFLRSQEEKI 493



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 113/331 (34%), Positives = 169/331 (51%), Gaps = 24/331 (7%)

Query: 77  GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGK 135
           G N L+ LP E+G L  L  L+L+SNQ      E   L +L  LDLS+N L+ LP EIG 
Sbjct: 113 GGNKLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGN 172

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           +  L+ L L  N L+TL   +       L K     L  NE          L T+   + 
Sbjct: 173 LQKLQTLDLAQNQLKTLPKEI-----EKLQKLEALHLGNNE----------LTTLPKEIE 217

Query: 196 VTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
              K   L L    L+ +P EI     + +L+L+ N    LP E+ +   LQ L L+ ++
Sbjct: 218 KLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSR 277

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY-NIASLPENPPFSS 312
           +   P  I  +L +L  L L++N    +P +   ++  LQ LDL+Y  + +LP+      
Sbjct: 278 LTTLPKEI-GNLQNLQELNLNSNQFTTLPEE-IGNLQKLQKLDLNYSQLTTLPKE--IGK 333

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ+L L + QL+  P +I +LQ L+ L LS N L ++P+   NL +L ELDL  N +
Sbjct: 334 LQKLQKLSLAQNQLKTLPKEIGKLQNLKNLSLSHNELTTLPKEIGNLQNLKELDLGGNQL 393

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           + LP ++G L+  LQ L L GN L+++ + I
Sbjct: 394 TTLPEKIGNLQ-KLQELFLAGNRLKTLPKEI 423


>gi|270015218|gb|EFA11666.1| hypothetical protein TcasGA2_TC008530 [Tribolium castaneum]
          Length = 621

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 202/393 (51%), Gaps = 44/393 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++++++  NKL  L  + I +   L +L  + N L  +P+ +G L++L  L    N I  
Sbjct: 205 LTEINLSHNKLIELPPD-IVNLRGLLKLDVTHNDLVYLPK-MGELAKLQFLYAQHNNIEE 262

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQLR-LSV 118
           IP    GC  L + Y GNN +  +  +  + +S L  LDL  N++++   E   L+ L  
Sbjct: 263 IPD-FEGCTHLQQVYFGNNYIKEVTTDFCENMSNLKILDLRDNKIEQIPNEIAMLQHLIR 321

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LDL+NN L+ LP  +G +  L+ L L GN L+ +R  ++ G T  +LK+L+ +L ++ED 
Sbjct: 322 LDLTNNDLTDLPNSLGLLAHLQNLQLEGNKLKKIRGDIIKGGTMRILKHLKEQL-DDEDL 380

Query: 179 EA----STTKEDLITMATRLSVT-SKELSLEGMNLSAIPSEIWEAG---EITKLDLSRNS 230
           E+    ST + +  T   + ++  S+ L++    L+++P +++E     E+T +DL +N 
Sbjct: 381 ESVPKVSTMQHEAKTFPDKYTIKHSRSLNVTMKQLTSVPDDVFEEAKLAEVTIVDLCKNK 440

Query: 231 IQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
           +  +P  +   A +L  L LS N I + P+ I       +C+KL                
Sbjct: 441 LPSVPNGIQLVAENLTELNLSMNAISEIPEFIS------NCIKL---------------- 478

Query: 290 PMLQILDLSYNIAS-LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
              +  DL  N+ S LPE    SSL  L+EL L   +    P  +  +  L IL  S N 
Sbjct: 479 ---KYFDLGNNLLSDLPE--CLSSLVGLRELVLSNNRFVHIPDCVYSMVGLEILLASDNK 533

Query: 349 LQSI-PEGFKNLTSLTELDLSDNNISALPPELG 380
           +  I  EG KNLT +  LDL++NN+S +PPELG
Sbjct: 534 ITDINVEGLKNLTRIATLDLTNNNMSHIPPELG 566



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 160/330 (48%), Gaps = 44/330 (13%)

Query: 94  LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L  LDL SN L+E   +      L+ L+L +N+++ LPPEI  +T L KL L+ N     
Sbjct: 90  LNYLDLSSNVLQEIPGKIGMFEDLTALNLQDNNITSLPPEICNLTKLTKLNLSHN----- 144

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
                                          K +L+ M     V  + LSL   NL  I 
Sbjct: 145 -------------------------------KINLLPMEFYKLVELQVLSLAHNNLEKIS 173

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
               +   + +LDLS N + +LPP +     L  + LS NK+ + P  I+ +L  L  L 
Sbjct: 174 KNFADLVMLQQLDLSHNILTKLPPGMGFLVRLTEINLSHNKLIELPPDIV-NLRGLLKLD 232

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
           + +N L  +P  G  ++  LQ L   +N  ++ E P F    HLQ++Y     ++E  TD
Sbjct: 233 VTHNDLVYLPKMG--ELAKLQFLYAQHN--NIEEIPDFEGCTHLQQVYFGNNYIKEVTTD 288

Query: 333 ILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
               +  L+ILDL  N ++ IP     L  L  LDL++N+++ LP  LGLL   LQ L+L
Sbjct: 289 FCENMSNLKILDLRDNKIEQIPNEIAMLQHLIRLDLTNNDLTDLPNSLGLL-AHLQNLQL 347

Query: 392 DGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
           +GN L+ IR  I+  GT  +LK+LK+++ +
Sbjct: 348 EGNKLKKIRGDIIKGGTMRILKHLKEQLDD 377



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 175/398 (43%), Gaps = 56/398 (14%)

Query: 22  WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W    L  L  S N+L  +P  IG    L  L+L  N I S+P  I     L +  + +N
Sbjct: 85  WQFKPLNYLDLSSNVLQEIPGKIGMFEDLTALNLQDNNITSLPPEICNLTKLTKLNLSHN 144

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 138
            ++ LP E  KL +L  L L  N L++       L  L  LDLS+N L+ LPP +G +  
Sbjct: 145 KINLLPMEFYKLVELQVLSLAHNNLEKISKNFADLVMLQQLDLSHNILTKLPPGMGFLVR 204

Query: 139 LRKLLLTGNPLRTLRSSLVN-------GPTPALLKYL---------------RSRLPENE 176
           L ++ L+ N L  L   +VN         T   L YL                + + E  
Sbjct: 205 LTEINLSHNKLIELPPDIVNLRGLLKLDVTHNDLVYLPKMGELAKLQFLYAQHNNIEEIP 264

Query: 177 DSEASTTKEDLITMATRLS-VTS---------KELSLEGMNLSAIPSEIWEAGEITKLDL 226
           D E  T  + +      +  VT+         K L L    +  IP+EI     + +LDL
Sbjct: 265 DFEGCTHLQQVYFGNNYIKEVTTDFCENMSNLKILDLRDNKIEQIPNEIAMLQHLIRLDL 324

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT--SLSSLSCLK--LDNNPLRQVP 282
           + N + +LP  L   A LQ L L  NK+K     I+   ++  L  LK  LD+  L  VP
Sbjct: 325 TNNDLTDLPNSLGLLAHLQNLQLEGNKLKKIRGDIIKGGTMRILKHLKEQLDDEDLESVP 384

Query: 283 SDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDIL---RLQQL 339
                     ++  + +   + P+     ++ H + L +   QL   P D+    +L ++
Sbjct: 385 ----------KVSTMQHEAKTFPDK---YTIKHSRSLNVTMKQLTSVPDDVFEEAKLAEV 431

Query: 340 RILDLSQNSLQSIPEGFKNLT-SLTELDLSDNNISALP 376
            I+DL +N L S+P G + +  +LTEL+LS N IS +P
Sbjct: 432 TIVDLCKNKLPSVPNGIQLVAENLTELNLSMNAISEIP 469



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 27/185 (14%)

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           +L+L G +L+ +P +++   E+T+ D ++       PE                 ++W  
Sbjct: 43  QLNLSGRSLAHVPEKMFTMYELTEEDTAKYIDFNKEPEE----------------ENW-- 84

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
                   L+ L L +N L+++P     F+D+  L + D   NI SLP  P   +L  L 
Sbjct: 85  ---WQFKPLNYLDLSSNVLQEIPGKIGMFEDLTALNLQD--NNITSLP--PEICNLTKLT 137

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L L   ++   P +  +L +L++L L+ N+L+ I + F +L  L +LDLS N ++ LPP
Sbjct: 138 KLNLSHNKINLLPMEFYKLVELQVLSLAHNNLEKISKNFADLVMLQQLDLSHNILTKLPP 197

Query: 378 ELGLL 382
            +G L
Sbjct: 198 GMGFL 202


>gi|327267576|ref|XP_003218575.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Anolis
           carolinensis]
          Length = 582

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 196/406 (48%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L + GNKL  L    +     L  L  S+N L  +P+++ +L +L  +DL  N++  
Sbjct: 125 LTELYLYGNKLQSLPPE-VGCLVNLVTLALSENSLTSLPDSLDNLKQLRMVDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  +    SL   Y+  N ++A+  ++  LS L  L +  N++K+   E  +L  L  L
Sbjct: 184 IPPVVYRLTSLTTLYLRFNRITAVEKDIKNLSLLTMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T + KL L  N L  L  S+ N      L  L+S         
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDSIGN------LSSLKS--------- 288

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                                L L    LSAIP  + +  ++ +L+L  N I  LP  L 
Sbjct: 289 ---------------------LGLRYNRLSAIPRSLAQCSKLDELNLENNIISALPEGLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS  +L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVNLTSLTLARNCFQSYPVGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+S+P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRSLPHGIG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L   LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLR-DLQRLILTNNQLSTLPRGI 490



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 111/206 (53%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS + E  ++T+L L  N +Q LPPE+    +L TL LS N +   
Sbjct: 102 SVRLDLAKRSIHLLPSSVKELTQLTELYLYGNKLQSLPPEVGCLVNLVTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  + L +N LR++P   ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKQLRMVDLRHNKLREIPPVVYR-LTSLTTLYLRFNRITAVEK-DIKNLSLLT 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T+LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL++L L  N L +I R++
Sbjct: 279 SIGNLS-SLKSLGLRYNRLSAIPRSL 303



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L +LP  +G L KL  LDL  N+L+    E   LR L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLRSLPHGIGNLRKLRELDLEENKLESLPNEIAYLRDLQRLILT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN LS LP  IG +  L  L L  N L  L
Sbjct: 480 NNQLSTLPRGIGHLINLTHLGLGENFLTQL 509



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 26/198 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTEL-----------------------IASKNLLNG 37
           +SKL+++ N+LT L  +   +WT + EL                       I S NLL  
Sbjct: 381 LSKLNMKDNQLTSLPLDF-GTWTSMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRS 439

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P  IG+L +L  LDL +N++ S+P+ I+    L    + NN LS LP  +G L  L  L
Sbjct: 440 LPHGIGNLRKLRELDLEENKLESLPNEIAYLRDLQRLILTNNQLSTLPRGIGHLINLTHL 499

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNN-SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
            L  N L +   E   L  L  L L++N  L+ LP E+   + L  + +   PL TL + 
Sbjct: 500 GLGENFLTQLPEEIGTLENLEELYLNDNPHLNSLPFELALCSKLSIMSIENCPLNTLPAQ 559

Query: 156 LVNGPTPALLKYLRSRLP 173
           +V G    ++++L+ + P
Sbjct: 560 IVAGGPSFIIQFLKMQGP 577


>gi|260812948|ref|XP_002601182.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
 gi|229286473|gb|EEN57194.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
          Length = 462

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 197/396 (49%), Gaps = 55/396 (13%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L+ +P  +G L++L  LDL  N + ++P+ +    ++    + +  L  LP E+G+L++L
Sbjct: 12  LHTLPPEVGKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLNLSHCQLRTLPPEVGRLTQL 71

Query: 95  GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDL SN L+    E  QL  +  LDLS+  L  LP E+ K+T L  L L+ NPL+TL 
Sbjct: 72  EWLDLSSNPLQTLPAEVGQLTNVKHLDLSHCQLHTLPLEVWKLTQLEWLDLSSNPLQTL- 130

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKE-DL--ITMATRLSVTSKELSLEGMNLSA 210
                   PA            E  + +  K  DL    + T  S   +   LE ++LS+
Sbjct: 131 --------PA------------EVGQLTNVKHLDLSQCQLRTLPSEVGRLTQLEWLDLSS 170

Query: 211 -----IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 265
                +P+E+     + KLDL  N +Q LP E+  C +++ L LS  +++  P  +   L
Sbjct: 171 NPLQTLPAEVGHLTNLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVW-KL 229

Query: 266 SSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYNIASLPE-------------NPPF 310
           + L  L L +NPL+ +P++     ++  L + D   +I   PE             + P 
Sbjct: 230 TQLEWLDLRSNPLQTLPTEVGHLTNVKYLNLSDCQLHILP-PEVGRLTQLEKLDLCSNPL 288

Query: 311 SSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
            +LP       +++ L L   QLR  P ++ +L QL  L LS N LQ++P     LT++ 
Sbjct: 289 QTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLSLSSNPLQTLPAEVGQLTNVK 348

Query: 364 ELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           +L+LSD  +  LPPE+G L   L+ L L  NPL+++
Sbjct: 349 QLNLSDCQLHTLPPEVGKLT-QLERLDLSSNPLQTL 383



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 173/378 (45%), Gaps = 64/378 (16%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T L  L  S N L  +P  +G L+ +  LDL Q ++ ++PS +     L    + +N L 
Sbjct: 115 TQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSQCQLRTLPSEVGRLTQLEWLDLSSNPLQ 174

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 141
            LPAE+G L+ L  LDL SN L+    E      +  LDLS+  L  LP E+ K+T L  
Sbjct: 175 TLPAEVGHLTNLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEW 234

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 201
           L L  NPL+TL         P  + +L +                            K L
Sbjct: 235 LDLRSNPLQTL---------PTEVGHLTN---------------------------VKYL 258

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
           +L    L  +P E+    ++ KLDL  N +Q LP E+  C +++ L LS  +++  P  +
Sbjct: 259 NLSDCQLHILPPEVGRLTQLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEV 318

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYL 321
              L+ L  L L +NPL+ +P++                            L ++++L L
Sbjct: 319 W-KLTQLEWLSLSSNPLQTLPAE-------------------------VGQLTNVKQLNL 352

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGL 381
              QL   P ++ +L QL  LDLS N LQ++P     LT++  LDLS   +  LPPE+G 
Sbjct: 353 SDCQLHTLPPEVGKLTQLERLDLSSNPLQTLPAEVGQLTNVKHLDLSQCLLHTLPPEVGR 412

Query: 382 LEPSLQALRLDGNPLRSI 399
           L   L+ L L  NPL ++
Sbjct: 413 LT-QLEWLDLRSNPLHAL 429



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 170/381 (44%), Gaps = 41/381 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N L  L    +   T +  L  S+  L  +P  +G L++L  LDL  N + +
Sbjct: 117 LEWLDLSSNPLQTLPAE-VGQLTNVKHLDLSQCQLRTLPSEVGRLTQLEWLDLSSNPLQT 175

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ +    +L +  + +N L  LPAE+G  + +  LDL   QL+    E  +L +L  L
Sbjct: 176 LPAEVGHLTNLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWL 235

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL +N L  LP E+G +T ++ L L+   L  L   +              RL + E  +
Sbjct: 236 DLRSNPLQTLPTEVGHLTNVKYLNLSDCQLHILPPEV-------------GRLTQLEKLD 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             +     +          K L L    L  +P E+W+  ++  L LS N +Q LP E+ 
Sbjct: 283 LCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLSLSSNPLQTLPAEVG 342

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +++ L LS  ++   P  +   L+ L  L L +NPL+ +P++               
Sbjct: 343 QLTNVKQLNLSDCQLHTLPPEV-GKLTQLERLDLSSNPLQTLPAE--------------- 386

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                        L +++ L L +  L   P ++ RL QL  LDL  N L ++P     L
Sbjct: 387 ----------VGQLTNVKHLDLSQCLLHTLPPEVGRLTQLEWLDLRSNPLHALPAEVGQL 436

Query: 360 TSLTELDLSDNNISALPPELG 380
           T++  LDLS   +  LPPE+G
Sbjct: 437 TNVKHLDLSHCQLHTLPPEVG 457



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 152/298 (51%), Gaps = 28/298 (9%)

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLR------ 169
           LDLS+  L  LPPE+GK+T L  L L+ NPL+TL +    L N      +K+L       
Sbjct: 5   LDLSDCQLHTLPPEVGKLTQLEWLDLSSNPLQTLPAEVGQLTN------VKHLNLSHCQL 58

Query: 170 -------SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 222
                   RL + E  + S+     +          K L L    L  +P E+W+  ++ 
Sbjct: 59  RTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSHCQLHTLPLEVWKLTQLE 118

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
            LDLS N +Q LP E+    +++ L LS+ +++  P  +   L+ L  L L +NPL+ +P
Sbjct: 119 WLDLSSNPLQTLPAEVGQLTNVKHLDLSQCQLRTLPSEV-GRLTQLEWLDLSSNPLQTLP 177

Query: 283 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           ++    +  L+ LDL  N + +LP         +++ L L   QLR  P ++ +L QL  
Sbjct: 178 AE-VGHLTNLEKLDLCSNPLQTLPAE--VGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEW 234

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LDL  N LQ++P    +LT++  L+LSD  +  LPPE+G L   L+ L L  NPL+++
Sbjct: 235 LDLRSNPLQTLPTEVGHLTNVKYLNLSDCQLHILPPEVGRLT-QLEKLDLCSNPLQTL 291



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 27/201 (13%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           K L L    L  +P E+ +  ++  LDLS N +Q LP E+    +++ L LS  +++  P
Sbjct: 3   KHLDLSDCQLHTLPPEVGKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLNLSHCQLRTLP 62

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 318
             +   L+ L  L L +NPL+ +P++                            L +++ 
Sbjct: 63  PEV-GRLTQLEWLDLSSNPLQTLPAE-------------------------VGQLTNVKH 96

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L L   QL   P ++ +L QL  LDLS N LQ++P     LT++  LDLS   +  LP E
Sbjct: 97  LDLSHCQLHTLPLEVWKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSQCQLRTLPSE 156

Query: 379 LGLLEPSLQALRLDGNPLRSI 399
           +G L   L+ L L  NPL+++
Sbjct: 157 VGRLT-QLEWLDLSSNPLQTL 176



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 1/122 (0%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +   T + +L  S   L+ +P  +G L++L RLDL  N + ++P+ +    ++    +  
Sbjct: 341 VGQLTNVKQLNLSDCQLHTLPPEVGKLTQLERLDLSSNPLQTLPAEVGQLTNVKHLDLSQ 400

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
             L  LP E+G+L++L  LDL SN L     E  QL  +  LDLS+  L  LPPE+G++T
Sbjct: 401 CLLHTLPPEVGRLTQLEWLDLRSNPLHALPAEVGQLTNVKHLDLSHCQLHTLPPEVGRLT 460

Query: 138 TL 139
            L
Sbjct: 461 QL 462



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           ++ L L   QL   P ++ +L QL  LDLS N LQ++P     LT++  L+LS   +  L
Sbjct: 2   IKHLDLSDCQLHTLPPEVGKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLNLSHCQLRTL 61

Query: 376 PPELGLLEPSLQALRLDGNPLRSI 399
           PPE+G L   L+ L L  NPL+++
Sbjct: 62  PPEVGRLT-QLEWLDLSSNPLQTL 84


>gi|323453411|gb|EGB09283.1| hypothetical protein AURANDRAFT_24947, partial [Aureococcus
           anophagefferens]
          Length = 318

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 120/359 (33%), Positives = 170/359 (47%), Gaps = 43/359 (11%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +PE+ G L RL  L+L  + + S+P S  G  SL E  + NNAL++LP   G L+ L TL
Sbjct: 1   LPESFGGLERLTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVTL 60

Query: 98  DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            L+ N L         L  L  L L NN+L+ LP   G +++L +L L GN L +L    
Sbjct: 61  FLNDNALASLPESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASL---- 116

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                           PE        +  DL ++ T        L L    L+++P    
Sbjct: 117 ----------------PE--------SFGDLASLVT--------LYLHNNALASLPESFG 144

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           E   +  L+L  N+++ LP      A L TL L  N +   P++    L  L+ L L NN
Sbjct: 145 ELESLVTLNLHTNALKSLPESFGDLAILVTLYLHENALASLPESF-GDLERLTTLNLYNN 203

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            L  +P + F D+  L  L L+ N +ASLPE+  F  L  L+ L L    L   P     
Sbjct: 204 ALASLP-ESFGDLASLVTLYLNDNALASLPES--FGGLESLEHLDLNDNALASLPESFGG 260

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           L  L  L L  N+L S+PE F +L+SL  L+L +N +++LP   G LE SL  L L+ N
Sbjct: 261 LASLVTLYLRNNALASLPESFGDLSSLVTLELRNNTLTSLPESFGGLE-SLVTLYLNDN 318



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 132/300 (44%), Gaps = 42/300 (14%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L  L  + N L  +PE+ G L+ L  L L+ N + S+P S  G  SL E  +G NAL++L
Sbjct: 57  LVTLFLNDNALASLPESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASL 116

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P   G L+ L TL LH+N L        +L  L  L+L  N+L  LP   G +  L  L 
Sbjct: 117 PESFGDLASLVTLYLHNNALASLPESFGELESLVTLNLHTNALKSLPESFGDLAILVTLY 176

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L +L  S                     D E  TT                 L+L
Sbjct: 177 LHENALASLPESF-------------------GDLERLTT-----------------LNL 200

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
               L+++P    +   +  L L+ N++  LP       SL+ L L+ N +   P++   
Sbjct: 201 YNNALASLPESFGDLASLVTLYLNDNALASLPESFGGLESLEHLDLNDNALASLPESF-G 259

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
            L+SL  L L NN L  +P + F D+  L  L+L  N + SLPE+  F  L  L  LYL 
Sbjct: 260 GLASLVTLYLRNNALASLP-ESFGDLSSLVTLELRNNTLTSLPES--FGGLESLVTLYLN 316



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 123/277 (44%), Gaps = 39/277 (14%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L  L+   N L  +PE+ G LS L+ L L  N + S+P S     SL   Y+ NNAL++L
Sbjct: 80  LEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESFGDLASLVTLYLHNNALASL 139

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLL 143
           P   G+L  L TL+LH+N LK        L + V L L  N+L+ LP   G +  L  L 
Sbjct: 140 PESFGELESLVTLNLHTNALKSLPESFGDLAILVTLYLHENALASLPESFGDLERLTTLN 199

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L                    + LPE        +  DL ++ T        L L
Sbjct: 200 LYNNAL--------------------ASLPE--------SFGDLASLVT--------LYL 223

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
               L+++P        +  LDL+ N++  LP      ASL TL L  N +   P++   
Sbjct: 224 NDNALASLPESFGGLESLEHLDLNDNALASLPESFGGLASLVTLYLRNNALASLPESF-G 282

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
            LSSL  L+L NN L  +P + F  +  L  L L+ N
Sbjct: 283 DLSSLVTLELRNNTLTSLP-ESFGGLESLVTLYLNDN 318



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 134/290 (46%), Gaps = 42/290 (14%)

Query: 115 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           RL+ L+L N++L+ LP   G + +L +L L  N L +L                    PE
Sbjct: 10  RLTTLNLGNHALTSLPESFGGLASLVELNLYNNALASL--------------------PE 49

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
                   +  DL ++ T        L L    L+++P        +  L L  N++  L
Sbjct: 50  --------SFGDLASLVT--------LFLNDNALASLPESFGGLASLEYLMLYNNALASL 93

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P      +SL  L L  N +   P++    L+SL  L L NN L  +P + F ++  L  
Sbjct: 94  PESFGGLSSLVELRLGGNALASLPESF-GDLASLVTLYLHNNALASLP-ESFGELESLVT 151

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           L+L  N + SLPE+  F  L  L  LYL    L   P     L++L  L+L  N+L S+P
Sbjct: 152 LNLHTNALKSLPES--FGDLAILVTLYLHENALASLPESFGDLERLTTLNLYNNALASLP 209

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           E F +L SL  L L+DN +++LP   G LE SL+ L L+ N L S+  + 
Sbjct: 210 ESFGDLASLVTLYLNDNALASLPESFGGLE-SLEHLDLNDNALASLPESF 258


>gi|300868028|ref|ZP_07112666.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
 gi|300333948|emb|CBN57844.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
          Length = 376

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 186/406 (45%), Gaps = 85/406 (20%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +PE I +L++L RLDL  N++  +P +I+    L    + NN L+ +P  +  LS+L
Sbjct: 32  LTEVPEAIATLTQLQRLDLDCNQLTKVPEAIASLSQLQILNLSNNKLTEVPEAIASLSQL 91

Query: 95  GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 154
            TL+L  N+L E                      +P  I  +T L+KL L+ N L     
Sbjct: 92  QTLNLIYNKLTE----------------------VPEAIATLTQLQKLYLSNNQL----- 124

Query: 155 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 214
                          +++PE             I   ++L    + L+L    L+ +P  
Sbjct: 125 ---------------TQVPEA------------IASLSQL----QTLNLNFNQLTEVPEA 153

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           I    ++ +L+LS N + E+P  ++S   L+ L L+ N+++  P+AI  SL+ L  L L 
Sbjct: 154 IASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYLNNNQLRKVPEAI-ASLTQLQRLSLS 212

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
           +N L  VP +    +  L+ L+LS N +  LPE    +SL  LQELYL   QL E P  I
Sbjct: 213 DNELTAVP-EAIASLSQLRSLNLSNNQLTELPE--AIASLTQLQELYLVGNQLTELPEAI 269

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE---------- 383
             L QL+ L L  N L ++PE   +LT L  L LSDN ++A+P  +  L           
Sbjct: 270 ASLTQLQELYLVGNELTAVPEAIASLTQLQRLSLSDNELTAVPEAIASLTHLQGLDLSYN 329

Query: 384 ------------PSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
                         LQ L LD NPL        ++G +AV +YL D
Sbjct: 330 QLTQVPEAIASLSQLQELYLDDNPLNPDLAAAYEQGIEAVKEYLLD 375



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 1/102 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L + GN+LT L    IAS T L EL    N L  +PE I SL++L RL L  N + +
Sbjct: 252 LQELYLVGNQLTELPEA-IASLTQLQELYLVGNELTAVPEAIASLTQLQRLSLSDNELTA 310

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 102
           +P +I+    L    +  N L+ +P  +  LS+L  L L  N
Sbjct: 311 VPEAIASLTHLQGLDLSYNQLTQVPEAIASLSQLQELYLDDN 352



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L + GN+LT +    IAS T L  L  S N L  +PE I SL+ L  LDL  N++  
Sbjct: 275 LQELYLVGNELTAVPEA-IASLTQLQRLSLSDNELTAVPEAIASLTHLQGLDLSYNQLTQ 333

Query: 61  IPSSISGCCSLAEFYMGNNALS 82
           +P +I+    L E Y+ +N L+
Sbjct: 334 VPEAIASLSQLQELYLDDNPLN 355



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 1/83 (1%)

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L  M+L E P  I  L QL+ LDL  N L  +PE   +L+ L  L+LS+N ++ +P  + 
Sbjct: 27  LGYMELTEVPEAIATLTQLQRLDLDCNQLTKVPEAIASLSQLQILNLSNNKLTEVPEAIA 86

Query: 381 LLEPSLQALRLDGNPLRSIRRTI 403
            L   LQ L L  N L  +   I
Sbjct: 87  SL-SQLQTLNLIYNKLTEVPEAI 108


>gi|148225142|ref|NP_001080350.1| leucine-rich repeat protein SHOC-2 [Xenopus laevis]
 gi|82242622|sp|Q8AVI4.1|SHOC2_XENLA RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|27503220|gb|AAH42263.1| Shoc2-prov protein [Xenopus laevis]
          Length = 577

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 196/406 (48%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L + GNKL  L    + +   L +L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 120 ITELYLYGNKLQSLPAE-VGNLVNLVKLALSENSLTSLPDSLDNLKKLCMLDLRHNKLRE 178

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  +    SL   ++  N ++A+  +L  L KL  L +  N++K    E  +L  L  L
Sbjct: 179 IPPVVYRLSSLTTLFLRFNRITAVEKDLKMLPKLTMLSIRENKIKHLPAEIGELCNLITL 238

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 239 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 277

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  S+ L L    LSA+P  + +  E+ +L+L  N+I  LP  L 
Sbjct: 278 --------------LSSLSR-LGLRYNRLSAVPRSLSKCSELDELNLENNNISTLPEGLL 322

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   + +L L+RN  + +P    +  SS+  L +++N + ++P   F    +L  L++ 
Sbjct: 323 SSLVKVNSLTLARNCFQSYPVGGPSQFSSIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 382

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  + +L LS N L+ +P G  
Sbjct: 383 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSIEVLILSNNLLKKLPHGIG 440

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 441 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 485



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 181/405 (44%), Gaps = 64/405 (15%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L  L  + N L  +P+ IG+ +++  LDL  N +L +P +I    SL+   +  
Sbjct: 229 IGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRY 288

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N LSA+P  L K S+L                        L+L NN++S LP        
Sbjct: 289 NRLSAVPRSLSKCSELDE----------------------LNLENNNISTLP-------- 318

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
                        L SSLV   +  L +      P    S+ S             S+ S
Sbjct: 319 -----------EGLLSSLVKVNSLTLARNCFQSYPVGGPSQFS-------------SIYS 354

Query: 199 KELSLEGMNLSAIPSEIWEAGEI-TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             L++E   ++ IP  I+   ++ +KL++  N +  LP +  +  S+  L L+ N++   
Sbjct: 355 --LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 412

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P+ + + L S+  L L NN L+++P  G  ++  L+ LDL  N + SLP    +  L  L
Sbjct: 413 PEDV-SGLVSIEVLILSNNLLKKLP-HGIGNLRKLRELDLEENKLESLPNEIAY--LKDL 468

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISAL 375
           Q+L L   QL   P  I  L  L  L L +N L  +PE    L +L EL L+DN N+ +L
Sbjct: 469 QKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSL 528

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           P EL L    L  + ++  PL  +   I+  G   ++++LK + P
Sbjct: 529 PFELALCS-KLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGP 572



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 148/315 (46%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ ++P 
Sbjct: 238 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAVPR 296

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S+S C  L E  + NN +S LP   L  L K+ +L L  N  + Y V       S+  L+
Sbjct: 297 SLSKCSELDELNLENNNISTLPEGLLSSLVKVNSLTLARNCFQSYPVGGPSQFSSIYSLN 356

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 357 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 416

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  I    ++ +LDL  N ++ LP E++
Sbjct: 417 SGLVSIEVLILSNNL-------------LKKLPHGIGNLRKLRELDLEENKLESLPNEIA 463

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 464 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 518

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 519 ----LNDNPNLHSLP 529



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +P  I +  +IT+L L  N +Q LP E+ +  +L  L LS N +   
Sbjct: 97  STRLDLAKKSIHMLPVSIKDLTQITELYLYGNKLQSLPAEVGNLVNLVKLALSENSLTSL 156

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++P   ++ +  L  L L +N  +  E      LP L 
Sbjct: 157 PDS-LDNLKKLCMLDLRHNKLREIPPVVYR-LSSLTTLFLRFNRITAVEK-DLKMLPKLT 213

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  +++  P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 214 MLSIRENKIKHLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 273

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L ++ R++
Sbjct: 274 TIGNLS-SLSRLGLRYNRLSAVPRSL 298


>gi|417776853|ref|ZP_12424685.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410573349|gb|EKQ36399.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
          Length = 738

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 136/408 (33%), Positives = 199/408 (48%), Gaps = 22/408 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L N  I     L EL   KN L   P+ IG L  L  L+L  N++ +
Sbjct: 96  LESLDLSENRLVMLPNE-IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLAT 154

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L +  +  N L+ LP E+G+L  L TL+L  NQL    VE  QL+ L  L
Sbjct: 155 LPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTL 214

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LS N L+  P EIG++  L++L L GN L+TL         P  +  L+     N D  
Sbjct: 215 GLSENQLTTFPKEIGQLENLQELDLNGNQLKTL---------PKEIGQLQKLEKLNLDGN 265

Query: 180 ASTT---KEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
             TT      L T+   +      + LSL    L+ +P EI +   +  LDL  N +  L
Sbjct: 266 QITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL 325

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P E++   +L+ L L+ NK+   P  I   L +L+ L+L NN +  +P +  K    LQ 
Sbjct: 326 PREINKLKNLKELYLNGNKLTIVPKEI-WELENLTILRLKNNRISTLPKEIEKS-KNLQE 383

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           L+L  N + +LP       L     L   R+++   P +I  L+ L I +LS N L SIP
Sbjct: 384 LNLRGNRLVTLPGEIGELKLLEELNLENNRIKI--LPNEIGALENLWIFNLSGNKLASIP 441

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
           +   NL +L  L L +N +  LP ++  L+  L+ L L  NPL S  R
Sbjct: 442 KEIGNLQNLRMLYLENNQLKTLPRQMEKLQ-DLEVLNLLINPLLSKER 488



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 174/387 (44%), Gaps = 50/387 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G   T L    I     L EL    N L   P  I  L +L  LDL +NR++ +P+
Sbjct: 53  LNLSGQNFTTLPKE-IEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPN 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  +  N L   P E+G+L  L TL+L  NQL    VE  QL+ L  L+L 
Sbjct: 112 EIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLR 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++  L+ L L  N L TL         P  +  L++            
Sbjct: 172 KNRLTVLPKEIGQLQNLQTLNLQDNQLATL---------PVEIGQLQN------------ 210

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                           + L L    L+  P EI +   + +LDL+ N ++ LP E+    
Sbjct: 211 ---------------LQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQ 255

Query: 243 SLQTLILSRNKIKDWPD--------AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
            L+ L L  N+I   P         A +  L +L  L L  N L  +P +    +  L+ 
Sbjct: 256 KLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPRE-IGQLQNLKS 314

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           LDL  N + +LP     + L +L+ELYL   +L   P +I  L+ L IL L  N + ++P
Sbjct: 315 LDLGGNQLTTLPRE--INKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLP 372

Query: 354 EGFKNLTSLTELDLSDNNISALPPELG 380
           +  +   +L EL+L  N +  LP E+G
Sbjct: 373 KEIEKSKNLQELNLRGNRLVTLPGEIG 399



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 190/419 (45%), Gaps = 51/419 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+ GN+LT L    I     L EL  + N L  +P+ I  L  L  L L  NRI +
Sbjct: 312 LKSLDLGGNQLTTLPRE-INKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRIST 370

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  +  N L  LP E+G+L  L  L+L +N++K    E   L  L + 
Sbjct: 371 LPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIF 430

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS------------LVNGPTPALLKY 167
           +LS N L+ +P EIG +  LR L L  N L+TL               L+N       K 
Sbjct: 431 NLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKK 490

Query: 168 LRSRLP----ENEDSEASTTKEDL-ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 222
           +++ LP    +  D E   T  +L + +   L + S  LSLE    S  P EI     + 
Sbjct: 491 IQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILS--LSLEYQQFSLFPKEILRLKNLR 548

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQ 280
            L L   S+  LP E+     L+ L L  N++K  P  I  L +L SL      NN    
Sbjct: 549 SLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGA--NNEFEV 606

Query: 281 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
           +P    K+I  LQ                     +L+ L L + + +  P +I  L++L 
Sbjct: 607 LP----KEIARLQ---------------------NLRSLLLNQNRFKIFPKEIWELKKLV 641

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           IL+++ N L ++PE    L  L  LDLS N ++ LP E+G L  +L  L L  N ++++
Sbjct: 642 ILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLH-NLTELYLQYNRIKTL 699



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 120/228 (52%), Gaps = 7/228 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
           D +   T  DL T A +  +  + L+L G N + +P EI +   + +LDL  N +   P 
Sbjct: 30  DEDEPGTYMDL-TKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPA 88

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
            +     L++L LS N++   P+ I   L +L  L L  N L   P +    +  LQ L+
Sbjct: 89  VIVELQKLESLDLSENRLVMLPNEI-GRLQNLQELGLYKNKLITFPKE-IGQLQNLQTLN 146

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N +A+LP       L +L++L LR+ +L   P +I +LQ L+ L+L  N L ++P  
Sbjct: 147 LQDNQLATLP--VEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVE 204

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L +L  L LS+N ++  P E+G LE +LQ L L+GN L+++ + I
Sbjct: 205 IGQLQNLQTLGLSENQLTTFPKEIGQLE-NLQELDLNGNQLKTLPKEI 251



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 22  WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W +  L  L  + N L+ +PE IG L  L  LDL  NR+ ++PS I    +L E Y+  N
Sbjct: 635 WELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYN 694

Query: 80  ALSALPAELGKLSKLGTLDLHSN 102
            +  LP E+ +L  L  L L+ N
Sbjct: 695 RIKTLPEEIARLQNLRKLTLYEN 717



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 22/131 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           IA    L  L+ ++N     P+ I  L +L+ L+++ N++ ++P  I     L    + +
Sbjct: 611 IARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSH 670

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N L+ LP+E+G+L  L  L L  N++K                       LP EI ++  
Sbjct: 671 NRLTTLPSEIGQLHNLTELYLQYNRIK----------------------TLPEEIARLQN 708

Query: 139 LRKLLLTGNPL 149
           LRKL L  NP+
Sbjct: 709 LRKLTLYENPI 719


>gi|418693084|ref|ZP_13254147.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400356742|gb|EJP12900.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 738

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 136/408 (33%), Positives = 199/408 (48%), Gaps = 22/408 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L N  I     L EL   KN L   P+ IG L  L  L+L  N++ +
Sbjct: 96  LESLDLSENRLVMLPNE-IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLAT 154

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L +  +  N L+ LP E+G+L  L TL+L  NQL    VE  QL+ L  L
Sbjct: 155 LPVEIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTL 214

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LS N L+  P EIG++  L++L L GN L+TL         P  +  L+     N D  
Sbjct: 215 GLSENQLTTFPKEIGQLENLQELDLNGNQLKTL---------PKEIGQLQKLEKLNLDGN 265

Query: 180 ASTT---KEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
             TT      L T+   +      + LSL    L+ +P EI +   +  LDL  N +  L
Sbjct: 266 QITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL 325

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P E++   +L+ L L+ NK+   P  I   L +L+ L+L NN +  +P +  K    LQ 
Sbjct: 326 PREINKLKNLKELYLNGNKLTIVPKEI-WELENLTILRLKNNRISTLPKEIEKS-KNLQE 383

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           L+L  N + +LP       L     L   R+++   P +I  L+ L I +LS N L SIP
Sbjct: 384 LNLRGNRLVTLPGEIGELKLLEELNLENNRIKI--LPNEIGALENLWIFNLSGNKLASIP 441

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
           +   NL +L  L L +N +  LP ++  L+  L+ L L  NPL S  R
Sbjct: 442 KEIGNLQNLRMLYLENNQLKTLPRQMEKLQ-DLEVLNLLINPLLSKER 488



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 174/387 (44%), Gaps = 50/387 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ G   T L    I     L +L    N L   P  I  L +L  LDL +NR++ +P+
Sbjct: 53  LDLSGQNFTTLPKE-IEKLKNLQKLYLFDNQLATFPAVIVELQKLESLDLSENRLVMLPN 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  +  N L   P E+G+L  L TL+L  NQL    VE  +L+ L  L+L 
Sbjct: 112 EIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLEKLNLR 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++  L+ L L  N L TL         P  +  L++            
Sbjct: 172 KNRLTVLPKEIGQLQNLQTLNLQDNQLATL---------PVEIGQLQN------------ 210

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                           + L L    L+  P EI +   + +LDL+ N ++ LP E+    
Sbjct: 211 ---------------LQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQ 255

Query: 243 SLQTLILSRNKIKDWPD--------AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
            L+ L L  N+I   P         A +  L +L  L L  N L  +P +    +  L+ 
Sbjct: 256 KLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPRE-IGQLQNLKS 314

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           LDL  N + +LP     + L +L+ELYL   +L   P +I  L+ L IL L  N + ++P
Sbjct: 315 LDLGGNQLTTLPRE--INKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLP 372

Query: 354 EGFKNLTSLTELDLSDNNISALPPELG 380
           +  +   +L EL+L  N +  LP E+G
Sbjct: 373 KEIEKSKNLQELNLRGNRLVTLPGEIG 399



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 190/419 (45%), Gaps = 51/419 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+ GN+LT L    I     L EL  + N L  +P+ I  L  L  L L  NRI +
Sbjct: 312 LKSLDLGGNQLTTLPRE-INKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRIST 370

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  +  N L  LP E+G+L  L  L+L +N++K    E   L  L + 
Sbjct: 371 LPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIF 430

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS------------LVNGPTPALLKY 167
           +LS N L+ +P EIG +  LR L L  N L+TL               L+N       K 
Sbjct: 431 NLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKK 490

Query: 168 LRSRLP----ENEDSEASTTKEDL-ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 222
           +++ LP    +  D E   T  +L + +   L + S  LSLE    S  P EI     + 
Sbjct: 491 IQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILS--LSLEYQQFSLFPKEILRLKNLR 548

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQ 280
            L L   S+  LP E+     L+ L L  N++K  P  I  L +L SL      NN    
Sbjct: 549 SLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGA--NNEFEV 606

Query: 281 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
           +P    K+I  LQ                     +L+ L L + + +  P +I  L++L 
Sbjct: 607 LP----KEIARLQ---------------------NLRSLLLNQNRFKIFPKEIWELKKLV 641

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           IL+++ N L ++PE    L  L  LDLS N ++ LP E+G L  +L  L L  N ++++
Sbjct: 642 ILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLH-NLTELYLQYNRIKTL 699



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 154/326 (47%), Gaps = 25/326 (7%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS  + + LP EI K+  L+KL L  N L T  + +V       L    +RL 
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNQLATFPAVIVELQKLESLDLSENRLV 107

Query: 174 E--NEDS------EASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITK 223
              NE        E    K  LIT    +      + L+L+   L+ +P EI     + K
Sbjct: 108 MLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLEK 167

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           L+L +N +  LP E+    +LQTL L  N++   P  I   L +L  L L  N L   P 
Sbjct: 168 LNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEI-GQLQNLQTLGLSENQLTTFPK 226

Query: 284 DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL---------RRMQLREAPTDI 333
           +    +  LQ LDL+ N + +LP+      L  L++L L         +  QL   P +I
Sbjct: 227 E-IGQLENLQELDLNGNQLKTLPKE--IGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEI 283

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
            +L+ L+IL LS N L ++P     L +L  LDL  N ++ LP E+  L+ +L+ L L+G
Sbjct: 284 GQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLK-NLKELYLNG 342

Query: 394 NPLRSIRRTILDRGTKAVLKYLKDKI 419
           N L  + + I +     +L+   ++I
Sbjct: 343 NKLTIVPKEIWELENLTILRLKNNRI 368



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 114/217 (52%), Gaps = 6/217 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L G N + +P EI +   + KL L  N +   P  +     L++L
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNQLATFPAVIVELQKLESL 99

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            LS N++   P+ I   L +L  L L  N L   P +    +  LQ L+L  N +A+LP 
Sbjct: 100 DLSENRLVMLPNEI-GRLQNLQELGLYKNKLITFPKE-IGQLQNLQTLNLQDNQLATLP- 156

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +L++L LR+ +L   P +I +LQ L+ L+L  N L ++P     L +L  L 
Sbjct: 157 -VEIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLG 215

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           LS+N ++  P E+G LE +LQ L L+GN L+++ + I
Sbjct: 216 LSENQLTTFPKEIGQLE-NLQELDLNGNQLKTLPKEI 251



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 22  WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W +  L  L  + N L+ +PE IG L  L  LDL  NR+ ++PS I    +L E Y+  N
Sbjct: 635 WELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYN 694

Query: 80  ALSALPAELGKLSKLGTLDLHSN 102
            +  LP E+ +L  L  L L+ N
Sbjct: 695 RIKTLPEEIARLQNLRKLTLYEN 717



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 22/131 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           IA    L  L+ ++N     P+ I  L +L+ L+++ N++ ++P  I     L    + +
Sbjct: 611 IARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSH 670

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N L+ LP+E+G+L  L  L L  N++K                       LP EI ++  
Sbjct: 671 NRLTTLPSEIGQLHNLTELYLQYNRIK----------------------TLPEEIARLQN 708

Query: 139 LRKLLLTGNPL 149
           LRKL L  NP+
Sbjct: 709 LRKLTLYENPI 719


>gi|417762759|ref|ZP_12410747.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409941504|gb|EKN87133.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
          Length = 738

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 136/408 (33%), Positives = 199/408 (48%), Gaps = 22/408 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L N  I     L EL   KN L   P+ IG L  L  L+L  N++ +
Sbjct: 96  LESLDLSENRLVMLPNE-IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLAT 154

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L +  +  N L+ LP E+G+L  L TL+L  NQL    VE  QL+ L  L
Sbjct: 155 LPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTL 214

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LS N L+  P EIG++  L++L L GN L+TL         P  +  L+     N D  
Sbjct: 215 GLSENQLTTFPKEIGQLENLQELDLNGNQLKTL---------PKEIGQLQKLEKLNLDGN 265

Query: 180 ASTT---KEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
             TT      L T+   +      + LSL    L+ +P EI +   +  LDL  N +  L
Sbjct: 266 QITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL 325

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P E++   +L+ L L+ NK+   P  I   L +L+ L+L NN +  +P +  K    LQ 
Sbjct: 326 PREINKLKNLKELYLNGNKLTIVPKEI-WELENLTILRLKNNRISTLPKEIEKS-KNLQE 383

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           L+L  N + +LP       L     L   R+++   P +I  L+ L I +LS N L SIP
Sbjct: 384 LNLRGNRLVTLPGEIGELKLLEELNLENNRIKI--LPNEIGALENLWIFNLSGNKLASIP 441

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
           +   NL +L  L L +N +  LP ++  L+  L+ L L  NPL S  R
Sbjct: 442 KEIGNLQNLRMLYLENNQLKTLPRQMEKLQ-DLEVLNLLINPLLSEER 488



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 174/387 (44%), Gaps = 50/387 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G   T L    I     L EL    N L   P  I  L +L  LDL +NR++ +P+
Sbjct: 53  LNLSGQNFTTLPKE-IEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPN 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  +  N L   P E+G+L  L TL+L  NQL    VE  QL+ L  L+L 
Sbjct: 112 EIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLR 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++  L+ L L  N L TL         P  +  L++            
Sbjct: 172 KNRLTVLPKEIGQLQNLQTLNLQDNQLATL---------PVEIGQLQN------------ 210

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                           + L L    L+  P EI +   + +LDL+ N ++ LP E+    
Sbjct: 211 ---------------LQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQ 255

Query: 243 SLQTLILSRNKIKDWPD--------AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
            L+ L L  N+I   P         A +  L +L  L L  N L  +P +    +  L+ 
Sbjct: 256 KLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPRE-IGQLQNLKS 314

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           LDL  N + +LP     + L +L+ELYL   +L   P +I  L+ L IL L  N + ++P
Sbjct: 315 LDLGGNQLTTLPRE--INKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLP 372

Query: 354 EGFKNLTSLTELDLSDNNISALPPELG 380
           +  +   +L EL+L  N +  LP E+G
Sbjct: 373 KEIEKSKNLQELNLRGNRLVTLPGEIG 399



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 190/419 (45%), Gaps = 51/419 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+ GN+LT L    I     L EL  + N L  +P+ I  L  L  L L  NRI +
Sbjct: 312 LKSLDLGGNQLTTLPRE-INKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRIST 370

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  +  N L  LP E+G+L  L  L+L +N++K    E   L  L + 
Sbjct: 371 LPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIF 430

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS------------LVNGPTPALLKY 167
           +LS N L+ +P EIG +  LR L L  N L+TL               L+N       K 
Sbjct: 431 NLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKK 490

Query: 168 LRSRLP----ENEDSEASTTKEDL-ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 222
           +++ LP    +  D E   T  +L + +   L + S  LSLE    S  P EI     + 
Sbjct: 491 IQALLPNCNIDLRDVEEGRTYRNLNLALEQPLKILS--LSLEYQQFSLFPKEILRLKNLR 548

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQ 280
            L L   S+  LP E+     L+ L L  N++K  P  I  L +L SL      NN    
Sbjct: 549 SLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGA--NNEFEV 606

Query: 281 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
           +P    K+I  LQ                     +L+ L L + + +  P +I  L++L 
Sbjct: 607 LP----KEIARLQ---------------------NLRSLLLNQNRFKIFPKEIWELKKLV 641

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           IL+++ N L ++PE    L  L  LDLS N ++ LP E+G L  +L  L L  N ++++
Sbjct: 642 ILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLH-NLTELYLQYNRIKTL 699



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 120/228 (52%), Gaps = 7/228 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
           D +   T  DL T A +  +  + L+L G N + +P EI +   + +LDL  N +   P 
Sbjct: 30  DEDEPGTYMDL-TKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPA 88

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
            +     L++L LS N++   P+ I   L +L  L L  N L   P +    +  LQ L+
Sbjct: 89  VIVELQKLESLDLSENRLVMLPNEI-GRLQNLQELGLYKNKLITFPKE-IGQLQNLQTLN 146

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N +A+LP       L +L++L LR+ +L   P +I +LQ L+ L+L  N L ++P  
Sbjct: 147 LQDNQLATLP--VEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVE 204

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L +L  L LS+N ++  P E+G LE +LQ L L+GN L+++ + I
Sbjct: 205 IGQLQNLQTLGLSENQLTTFPKEIGQLE-NLQELDLNGNQLKTLPKEI 251



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 22  WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W +  L  L  + N L+ +PE IG L  L  LDL  NR+ ++PS I    +L E Y+  N
Sbjct: 635 WELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYN 694

Query: 80  ALSALPAELGKLSKLGTLDLHSN 102
            +  LP E+ +L  L  L L+ N
Sbjct: 695 RIKTLPEEIARLQNLRKLTLYEN 717



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 22/131 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           IA    L  L+ ++N     P+ I  L +L+ L+++ N++ ++P  I     L    + +
Sbjct: 611 IARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSH 670

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N L+ LP+E+G+L  L  L L  N++K                       LP EI ++  
Sbjct: 671 NRLTTLPSEIGQLHNLTELYLQYNRIK----------------------TLPEEIARLQN 708

Query: 139 LRKLLLTGNPL 149
           LRKL L  NP+
Sbjct: 709 LRKLTLYENPI 719


>gi|421117845|ref|ZP_15578200.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010627|gb|EKO68763.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 636

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 192/418 (45%), Gaps = 36/418 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ +
Sbjct: 206 LQKLWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLAT 264

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+ NN L+ LP E+G+L  L  L    N+L     E  QL+ L  L
Sbjct: 265 LPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTL 324

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E
Sbjct: 325 NLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAE 378

Query: 180 ASTTK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWE 217
               +       E L     RL   +               +EL L     S +P EI  
Sbjct: 379 DGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISR 438

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              +  L L  N ++++P E+    +L+ L L  N+++  P  I   L +L  L L  N 
Sbjct: 439 LKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEI-GQLRNLQRLSLHQNT 497

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
           L+  P++  + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L
Sbjct: 498 LKIFPAE-IEQLKKLQKLDLSVNQFTTFPK--EIGKLENLQTLNLQRNQLTNLPAEIEQL 554

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           + L+ LDL+ N    +P+    L  L  LDL +N ++ LP E+G L+ +LQ L L  N
Sbjct: 555 KNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ-NLQWLYLQNN 611



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 183/407 (44%), Gaps = 54/407 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  NKLT      I     L +L   KN L   P+ IG L  L  L L++N++ +
Sbjct: 137 LQDLGLYKNKLTTFPKE-IGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTT 195

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
            P  I    +L + ++  N L+ALP E+G+L  L TLDL +NQ      E  QL+ L  L
Sbjct: 196 FPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTL 255

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L +N L+ LP EIG++  L++L L  N L  L   +        L+ L S  PEN    
Sbjct: 256 NLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQN---LQMLCS--PENR--- 307

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                       L+A+P E+ +   +  L+L  N +  LP E+ 
Sbjct: 308 ----------------------------LTALPKEMGQLKNLQTLNLVNNRLTVLPKEIG 339

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN-PLRQVPSDG-FKDIPM-----L 292
              +LQ L L  N +       L     +  L  D+N  LR+V  DG ++++ +     L
Sbjct: 340 QLQNLQDLELLMNPLS------LKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPL 393

Query: 293 QILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
           ++ DL     +  +  P       +L+ELYL        P +I RL+ L+ L L  N L+
Sbjct: 394 KVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLK 453

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
            IP     L +L  L+L  N +  LP E+G L  +LQ L L  N L+
Sbjct: 454 KIPSEIGQLRNLEALNLEANELERLPKEIGQLR-NLQRLSLHQNTLK 499



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 148/317 (46%), Gaps = 39/317 (12%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN--------------G 159
           L + VL+LS   L+ LP EIG++  L++L L  N L TL   +                 
Sbjct: 43  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 102

Query: 160 PTPALLKYLRS----RLPENE----DSEASTTK--EDLITMATRLSVTSKE--------- 200
             PA++  L+      L EN      +E    +  +DL     +L+   KE         
Sbjct: 103 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQD 162

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L L    L+  P EI     +  L L +N +   P E+    +LQ L LS N++   P  
Sbjct: 163 LGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE 222

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I   L +L  L L NN    +P +    +  LQ L+L  N +A+LP       L +LQEL
Sbjct: 223 I-GQLKNLQTLDLQNNQFTILPKE-IGQLQNLQTLNLQDNQLATLP--VEIGQLQNLQEL 278

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
           YLR  +L   P +I +LQ L++L   +N L ++P+    L +L  L+L +N ++ LP E+
Sbjct: 279 YLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 338

Query: 380 GLLEPSLQALRLDGNPL 396
           G L+ +LQ L L  NPL
Sbjct: 339 GQLQ-NLQDLELLMNPL 354



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 122/229 (53%), Gaps = 8/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+ E  T ++  +T A +  +  + L+L G  L+A+P EI +   + +L+L  N +  LP
Sbjct: 25  EEVEPGTYRD--LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLP 82

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L L  N++  +P A++  L  L  L L  N L  +P++    +  LQ L
Sbjct: 83  KEIGQLENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IGRLQNLQDL 140

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L  N + + P+      L +LQ+L L + +L   P +I RLQ L+ L L +N L + P+
Sbjct: 141 GLYKNKLTTFPK--EIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPK 198

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L +L LS+N ++ALP E+G L+ +LQ L L  N    + + I
Sbjct: 199 EIGQLQNLQKLWLSENRLTALPKEIGQLK-NLQTLDLQNNQFTILPKEI 246



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 104/254 (40%), Gaps = 37/254 (14%)

Query: 18  LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           +I  +  L EL       + +P+ I  L  L  L L  N +  IPS I    +L    + 
Sbjct: 412 VILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLE 471

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
            N L  LP E+G+L  L  L LH N LK +  E  QL+ L  LDLS N  +  P EIGK+
Sbjct: 472 ANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKL 531

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L+ L L  N L  L         PA ++ L++                          
Sbjct: 532 ENLQTLNLQRNQLTNL---------PAEIEQLKN-------------------------- 556

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             +EL L     + +P EI +  ++  LDL  N +  LP E+    +LQ L L  N+   
Sbjct: 557 -LQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSF 615

Query: 257 WPDAILTSLSSLSC 270
                +  L  L C
Sbjct: 616 EEQERIRKLLPLKC 629



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 2/128 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N L +     I     L +L  S N     P+ IG L  L  L+L +N++ +
Sbjct: 488 LQRLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTN 546

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E  + +N  + LP E+GKL KL TLDL +NQL     E  QL+ L  L
Sbjct: 547 LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 606

Query: 120 DLSNNSLS 127
            L NN  S
Sbjct: 607 YLQNNQFS 614


>gi|418672935|ref|ZP_13234265.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|410580042|gb|EKQ47873.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 738

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 136/408 (33%), Positives = 199/408 (48%), Gaps = 22/408 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L N  I     L EL   KN L   P+ IG L  L  L+L  N++ +
Sbjct: 96  LESLDLSENRLVMLPNE-IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLAT 154

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L +  +  N L+ LP E+G+L  L TL+L  NQL    VE  QL+ L  L
Sbjct: 155 LPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTL 214

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LS N L+  P EIG++  L++L L GN L+TL         P  +  L+     N D  
Sbjct: 215 GLSENQLTTFPKEIGQLENLQELDLNGNQLKTL---------PKEIGQLQKLEKLNLDGN 265

Query: 180 ASTT---KEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
             TT      L T+   +      + LSL    L+ +P EI +   +  LDL  N +  L
Sbjct: 266 QITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL 325

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P E++   +L+ L L+ NK+   P  I   L +L+ L+L NN +  +P +  K    LQ 
Sbjct: 326 PREINKLKNLKELYLNGNKLTIVPKEI-WELENLTILRLKNNRISTLPKEIEKS-KNLQE 383

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           L+L  N + +LP       L     L   R+++   P +I  L+ L I +LS N L SIP
Sbjct: 384 LNLRGNRLVTLPGEIGELKLLEELNLENNRIKI--LPNEIGALENLWIFNLSGNKLASIP 441

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
           +   NL +L  L L +N +  LP ++  L+  L+ L L  NPL S  R
Sbjct: 442 KEIGNLQNLRMLYLENNQLKTLPRQMEKLQ-DLEVLNLLINPLLSEER 488



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 174/387 (44%), Gaps = 50/387 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G   T L    I     L EL    N L   P  I  L +L  LDL +NR++ +P+
Sbjct: 53  LNLSGQNFTTLPKE-IEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPN 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  +  N L   P E+G+L  L TL+L  NQL    VE  QL+ L  L+L 
Sbjct: 112 EIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLR 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++  L+ L L  N L TL         P  +  L++            
Sbjct: 172 KNRLTVLPKEIGQLQNLQTLNLQDNQLATL---------PVEIGQLQN------------ 210

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                           + L L    L+  P EI +   + +LDL+ N ++ LP E+    
Sbjct: 211 ---------------LQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQ 255

Query: 243 SLQTLILSRNKIKDWPD--------AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
            L+ L L  N+I   P         A +  L +L  L L  N L  +P +    +  L+ 
Sbjct: 256 KLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPRE-IGQLQNLKS 314

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           LDL  N + +LP     + L +L+ELYL   +L   P +I  L+ L IL L  N + ++P
Sbjct: 315 LDLGGNQLTTLPRE--INKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLP 372

Query: 354 EGFKNLTSLTELDLSDNNISALPPELG 380
           +  +   +L EL+L  N +  LP E+G
Sbjct: 373 KEIEKSKNLQELNLRGNRLVTLPGEIG 399



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 191/419 (45%), Gaps = 51/419 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+ GN+LT L    I     L EL  + N L  +P+ I  L  L  L L  NRI +
Sbjct: 312 LKSLDLGGNQLTTLPRE-INKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRIST 370

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  +  N L  LP E+G+L  L  L+L +N++K    E   L  L + 
Sbjct: 371 LPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIF 430

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS------------LVNGPTPALLKY 167
           +LS N L+ +P EIG +  LR L L  N L+TL               L+N       K 
Sbjct: 431 NLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKK 490

Query: 168 LRSRLP----ENEDSEASTTKEDL-ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 222
           +++ LP    +  D E   T  +L + +   L + S  LSLE    S  P EI +   + 
Sbjct: 491 IQALLPNCNIDLRDVEEGRTYRNLNLALEQPLKILS--LSLEYQQFSLFPKEILKLKNLR 548

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQ 280
            L L   S+  LP E+     L+ L L  N++K  P  I  L +L SL      NN    
Sbjct: 549 SLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGA--NNEFEV 606

Query: 281 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
           +P    K+I  LQ                     +L+ L L + + +  P +I  L++L 
Sbjct: 607 LP----KEIARLQ---------------------NLRSLLLNQNRFKIFPKEIWELKKLV 641

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           IL+++ N L ++PE    L  L  LDLS N ++ LP E+G L  +L  L L  N ++++
Sbjct: 642 ILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLH-NLTELYLQYNRIKTL 699



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 120/228 (52%), Gaps = 7/228 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
           D +   T  DL T A +  +  + L+L G N + +P EI +   + +LDL  N +   P 
Sbjct: 30  DEDEPGTYMDL-TKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPA 88

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
            +     L++L LS N++   P+ I   L +L  L L  N L   P +    +  LQ L+
Sbjct: 89  VIVELQKLESLDLSENRLVMLPNEI-GRLQNLQELGLYKNKLITFPKE-IGQLQNLQTLN 146

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N +A+LP       L +L++L LR+ +L   P +I +LQ L+ L+L  N L ++P  
Sbjct: 147 LQDNQLATLP--VEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVE 204

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L +L  L LS+N ++  P E+G LE +LQ L L+GN L+++ + I
Sbjct: 205 IGQLQNLQTLGLSENQLTTFPKEIGQLE-NLQELDLNGNQLKTLPKEI 251



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 22  WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W +  L  L  + N L+ +PE IG L  L  LDL  NR+ ++PS I    +L E Y+  N
Sbjct: 635 WELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYN 694

Query: 80  ALSALPAELGKLSKLGTLDLHSN 102
            +  LP E+ +L  L  L L+ N
Sbjct: 695 RIKTLPEEIARLQNLRKLTLYEN 717



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 22/131 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           IA    L  L+ ++N     P+ I  L +L+ L+++ N++ ++P  I     L    + +
Sbjct: 611 IARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSH 670

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N L+ LP+E+G+L  L  L L  N++K                       LP EI ++  
Sbjct: 671 NRLTTLPSEIGQLHNLTELYLQYNRIK----------------------TLPEEIARLQN 708

Query: 139 LRKLLLTGNPL 149
           LRKL L  NP+
Sbjct: 709 LRKLTLYENPI 719


>gi|260788660|ref|XP_002589367.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
 gi|229274544|gb|EEN45378.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
          Length = 762

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 197/419 (47%), Gaps = 42/419 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L + GN+LT + +  + S   L  L    N L+  P  +  L +L +L ++ N++  
Sbjct: 290 LRELYIYGNQLTEVPSG-VRSLPNLEVLSVVNNKLSTFPPGVEKLQKLTKLGINDNQLTE 348

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +PS +    +L    +GNN LS  P  + KL KL  L ++ NQL E     C L  L VL
Sbjct: 349 VPSGVCSLPNLELLVVGNNMLSTFPPGVEKLQKLRELRIYGNQLTEVPPGVCSLPNLEVL 408

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            + NN LS  PP + K+  LR+L +  N L  + S + + P   +L    +++       
Sbjct: 409 HVYNNKLSTFPPGVEKLQKLRELRIHDNQLTEVPSRVCSLPNLEVLTVGNNKV------- 461

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             +T    +   T+L    +EL + G  L+ +PS +     + KL +  N I+ LP +++
Sbjct: 462 --STFPPGVEKLTKL----RELYINGNQLTEVPSGVCSLPNLEKLSVGGNPIRRLPDDVT 515

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
             A L+ L +   +  ++P  +L  L +L  L         VP D   ++  L  L L Y
Sbjct: 516 RLARLKALSVPNCQFDEFPRQVL-QLKTLEVLYAGGCKFDMVP-DEVGNLQHLCYLSLEY 573

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           N+                        LR  P+ +  L  LR++ L++N   + PE    L
Sbjct: 574 NL------------------------LRTLPSTMSHLHNLRVVRLNKNKFDTFPEVLCEL 609

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
            ++ +LD+S+NNI+ LP  L   +  L+ L + GNPL    + + ++GT A++ +LK +
Sbjct: 610 PAMEKLDISNNNITRLPTALHRAD-KLRDLDVSGNPLAYPPQDVCEQGTGAIMAFLKQE 667



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 190/394 (48%), Gaps = 19/394 (4%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +   T L  L  S N L  +PE IG L +L RLD + N + S+P +IS    L + Y+ +
Sbjct: 31  VFDITDLEALDVSNNKLTSIPEAIGRLQKLYRLDANGNMLTSLPQAISSLQGLKQLYVHS 90

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           N LS LP  L  L  L  L +  N+LK+   +  +C L L   D SNN+LS  PP + K+
Sbjct: 91  NNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSC-LNLVNFDASNNNLSTFPPGVEKL 149

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-EDLITMATRLS 195
             +R+L + GN L  + S + + P   LL    ++L           K   L     +L+
Sbjct: 150 QKVRELRIYGNQLTEVPSGVCSLPNLELLSVGNNKLSTFPPGVEKLQKLRILYIYGNQLT 209

Query: 196 VTSKEL-------SLE--GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
              + +       SLE  G   S  P  + +  ++T+L +  N + E+P  + S  +L+ 
Sbjct: 210 EVPRGVCSLSNLESLEANGNKFSTFPLGVEKLQKLTRLLIHDNQLTEVPSGVCSLPNLEV 269

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           L +  NK+  +P  +   L  L  L +  N L +VPS G + +P L++L +  N +++ P
Sbjct: 270 LDVGNNKLFTFPPGV-EKLQKLRELYIYGNQLTEVPS-GVRSLPNLEVLSVVNNKLSTFP 327

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
             P    L  L +L +   QL E P+ +  L  L +L +  N L + P G + L  L EL
Sbjct: 328 --PGVEKLQKLTKLGINDNQLTEVPSGVCSLPNLELLVVGNNMLSTFPPGVEKLQKLREL 385

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            +  N ++ +PP +  L P+L+ L +  N L + 
Sbjct: 386 RIYGNQLTEVPPGVCSL-PNLEVLHVYNNKLSTF 418



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 34/224 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L + GN+LT + +  + S   L +L    N +  +P+ +  L+RL  L +   +   
Sbjct: 474 LRELYINGNQLTEVPSG-VCSLPNLEKLSVGGNPIRRLPDDVTRLARLKALSVPNCQFDE 532

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL--------------------- 99
            P  +    +L   Y G      +P E+G L  L  L L                     
Sbjct: 533 FPRQVLQLKTLEVLYAGGCKFDMVPDEVGNLQHLCYLSLEYNLLRTLPSTMSHLHNLRVV 592

Query: 100 --HSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
             + N+   +    C+L  +  LD+SNN+++ LP  + +   LR L ++GNPL      +
Sbjct: 593 RLNKNKFDTFPEVLCELPAMEKLDISNNNITRLPTALHRADKLRDLDVSGNPLAYPPQDV 652

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 200
               T A++ +L+         EA   K+ ++    RLSV + +
Sbjct: 653 CEQGTGAIMAFLK--------QEADKEKK-ILRAFNRLSVRASQ 687


>gi|124002734|ref|ZP_01687586.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991962|gb|EAY31349.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 500

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/283 (36%), Positives = 150/283 (53%), Gaps = 16/283 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT + +NL  S   LT L   +N L  +PE IG+LS+L RL L++N+I  
Sbjct: 195 LQSLDISRNRLTKIPDNL-GSLKKLTSLFLQQNNLTKLPEKIGALSQLRRLYLNENKIKQ 253

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  ++    L    + +N L  LP ++GKLS+L  L LH N L+        L  L  L
Sbjct: 254 LPKELTSLVQLQVVKLEHNQLLELPNDIGKLSQLKVLSLHHNLLRALPESIGNLTLLPTL 313

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LSNN L  LP  +G M +L+ + +  N L+TL  S+             S+L + E   
Sbjct: 314 QLSNNRLELLPSSLGNMASLKSIWVRKNNLQTLPKSI-------------SQLKKIERIY 360

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           AS  +  L+ +        K L++ G  L+ IPSE+W   E+  LD SRN I  LP ++S
Sbjct: 361 ASQNQISLLPVELAELTQLKSLAISGNLLTEIPSELWGLEELYYLDASRNQITSLPNKIS 420

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
              SL+ L+LS N+++  P  I T L +L  L LDNN L ++P
Sbjct: 421 DLRSLRILVLSHNRLRTLPFGI-TRLKNLRELYLDNNQLAKLP 462



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 176/394 (44%), Gaps = 59/394 (14%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N +  +P+ I SL  L  LD+ +N ++ +P  I    +L +  + NN +  LP  +GKL 
Sbjct: 90  NNIKHLPQGIDSLKSLEVLDIQRNSLVDLPGKIVRLRNLTQLNIANNKVKELPENIGKLK 149

Query: 93  KLGTLDLHSNQLKEYCVEACQLR----------------------LSVLDLSNNSLSGLP 130
           K+   + + NQLK+       LR                      L  LD+S N L+ +P
Sbjct: 150 KMRVFEAYGNQLKQLPASFSSLRKLESLGLGKNQLESVSLGKYKNLQSLDISRNRLTKIP 209

Query: 131 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 190
             +G +  L  L L  N L  L   +        L  LR RL  NE+      KE  +T 
Sbjct: 210 DNLGSLKKLTSLFLQQNNLTKLPEKI------GALSQLR-RLYLNENKIKQLPKE--LTS 260

Query: 191 ATRLSVTS-------------------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 231
             +L V                     K LSL    L A+P  I     +  L LS N +
Sbjct: 261 LVQLQVVKLEHNQLLELPNDIGKLSQLKVLSLHHNLLRALPESIGNLTLLPTLQLSNNRL 320

Query: 232 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 291
           + LP  L + ASL+++ + +N ++  P +I + L  +  +    N +  +P +   ++  
Sbjct: 321 ELLPSSLGNMASLKSIWVRKNNLQTLPKSI-SQLKKIERIYASQNQISLLPVE-LAELTQ 378

Query: 292 LQILDLSYNIASLPENPPFSSLPHLQELYL---RRMQLREAPTDILRLQQLRILDLSQNS 348
           L+ L +S N+  L E P  S L  L+ELY     R Q+   P  I  L+ LRIL LS N 
Sbjct: 379 LKSLAISGNL--LTEIP--SELWGLEELYYLDASRNQITSLPNKISDLRSLRILVLSHNR 434

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
           L+++P G   L +L EL L +N ++ LPP +G L
Sbjct: 435 LRTLPFGITRLKNLRELYLDNNQLAKLPPNMGAL 468



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 187/364 (51%), Gaps = 15/364 (4%)

Query: 46  SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 105
           S++ RL+L   ++  IP +I    +L E  +GNN L+  P  L +L KL  L L++N +K
Sbjct: 34  SKVQRLNLSSQKLKKIPQNIVLLKNLEELNLGNNQLTVFPKVLFQLKKLKILRLYNNNIK 93

Query: 106 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164
                   L+ L VLD+  NSL  LP +I ++  L +L +  N ++ L  ++       +
Sbjct: 94  HLPQGIDSLKSLEVLDIQRNSLVDLPGKIVRLRNLTQLNIANNKVKELPENIGKLKKMRV 153

Query: 165 LKYLRSRLPENEDSEASTTK-EDLITMATRLSVTS-------KELSLEGMNLSAIPSEIW 216
            +   ++L +   S +S  K E L     +L   S       + L +    L+ IP  + 
Sbjct: 154 FEAYGNQLKQLPASFSSLRKLESLGLGKNQLESVSLGKYKNLQSLDISRNRLTKIPDNLG 213

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
              ++T L L +N++ +LP ++ + + L+ L L+ NKIK  P   LTSL  L  +KL++N
Sbjct: 214 SLKKLTSLFLQQNNLTKLPEKIGALSQLRRLYLNENKIKQLPKE-LTSLVQLQVVKLEHN 272

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            L ++P+D  K +  L++L L +N + +LPE+    +L  L  L L   +L   P+ +  
Sbjct: 273 QLLELPNDIGK-LSQLKVLSLHHNLLRALPES--IGNLTLLPTLQLSNNRLELLPSSLGN 329

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           +  L+ + + +N+LQ++P+    L  +  +  S N IS LP EL  L   L++L + GN 
Sbjct: 330 MASLKSIWVRKNNLQTLPKSISQLKKIERIYASQNQISLLPVELAEL-TQLKSLAISGNL 388

Query: 396 LRSI 399
           L  I
Sbjct: 389 LTEI 392



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 58
           +  L + GN LT + + L   W +  L  L AS+N +  +P  I  L  L  L L  NR+
Sbjct: 379 LKSLAISGNLLTEIPSEL---WGLEELYYLDASRNQITSLPNKISDLRSLRILVLSHNRL 435

Query: 59  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 102
            ++P  I+   +L E Y+ NN L+ LP  +G L  L    +  N
Sbjct: 436 RTLPFGITRLKNLRELYLDNNQLAKLPPNMGALLNLKIFTMKRN 479


>gi|75907715|ref|YP_322011.1| small GTP-binding protein domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75701440|gb|ABA21116.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
           29413]
          Length = 1107

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 192/398 (48%), Gaps = 44/398 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+ GN L  + + L+     L ELI  +  +  +PE I +L+ L  L L  N+I  
Sbjct: 82  LRKLDISGNPLERIPD-LVTQILHLEELILIRVEITEIPEAIANLTNLTHLILFSNQITE 140

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
            P +I+   +L +  + +N ++ +P  +  L+ L  L L SNQ+ E       L  L+ L
Sbjct: 141 TPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEAIANLTNLTQL 200

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL +N ++ +P  I  +T L +L L  N +  +  ++ N                     
Sbjct: 201 DLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIAN--------------------- 239

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                   +T  T L + S +       ++ IP  I     + +LDLS N I E+P  ++
Sbjct: 240 --------LTNLTHLILFSNQ-------ITEIPEAIANLTNLMQLDLSYNQITEIPKAIA 284

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  +L  L+LS NKI + P+AI  +L++L+ L L +N + ++P +   ++  L  L  +Y
Sbjct: 285 NLTNLTQLVLSDNKITEIPEAI-ANLTNLTQLDLSDNKITEIP-ETIANLTNLTELYFNY 342

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N I  + E    + L +L EL+L   Q+ + P  I  L  L  L L+ N +  I E    
Sbjct: 343 NKITQIAE--AIAKLTNLTELHLSSNQITQIPEAIANLTNLTELYLNYNKITQIAEAIAK 400

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           LT+LTEL L  N I+ +P  L  L P L+ L L GNPL
Sbjct: 401 LTNLTELHLDGNQITQIPEALESL-PKLEKLDLRGNPL 437



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 172/380 (45%), Gaps = 46/380 (12%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           IA+ T LT LI   N +   PE I  L+ L +LDL  N+I  IP +I+   +L    + +
Sbjct: 122 IANLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFS 181

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++ +P  +  L+ L  LDL  NQ+ E       L  L+ LDL +N ++ +P  I  +T
Sbjct: 182 NQITEIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIANLT 241

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L+L  N +  +  ++ N     L   ++  L  N+ +E      +L  +       
Sbjct: 242 NLTHLILFSNQITEIPEAIAN-----LTNLMQLDLSYNQITEIPKAIANLTNLT------ 290

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             +L L    ++ IP  I     +T+LDLS N I E+P  +++  +L  L  + NKI   
Sbjct: 291 --QLVLSDNKITEIPEAIANLTNLTQLDLSDNKITEIPETIANLTNLTELYFNYNKITQI 348

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
            +AI   L++L+ L L +N + Q+P                            ++L +L 
Sbjct: 349 AEAI-AKLTNLTELHLSSNQITQIPE-------------------------AIANLTNLT 382

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           ELYL   ++ +    I +L  L  L L  N +  IPE  ++L  L +LDL  N +   P 
Sbjct: 383 ELYLNYNKITQIAEAIAKLTNLTELHLDGNQITQIPEALESLPKLEKLDLRGNPLPISPE 442

Query: 378 ------ELGLLEPSLQALRL 391
                 E+G +E     LRL
Sbjct: 443 ILGSVYEVGSVEEIFNYLRL 462



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 165/341 (48%), Gaps = 18/341 (5%)

Query: 73  EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE 132
           E  +    L+ LP E+GKL +L +L L   Q+  Y  E    R  +  +S N+L  LP E
Sbjct: 20  ELDLSGQELTELPGEIGKLQQLESLIL-GKQVGGY--EWVGDRY-LKKVSGNNLKTLPLE 75

Query: 133 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-EDLITMA 191
           +  +  LRKL ++GNPL  +   +        L  +R  + E  ++ A+ T    LI  +
Sbjct: 76  LLGLPNLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPEAIANLTNLTHLILFS 135

Query: 192 TRLSVTSK---------ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
            +++ T +         +L L    ++ IP  I     +T L L  N I E+P  +++  
Sbjct: 136 NQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEAIANLT 195

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           +L  L L  N+I + P AI  +L++L+ L L +N + ++P        +  ++  S  I 
Sbjct: 196 NLTQLDLGDNQITEIPKAI-ANLTNLTQLDLGDNQITEIPKAIANLTNLTHLILFSNQIT 254

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
            +PE    ++L +L +L L   Q+ E P  I  L  L  L LS N +  IPE   NLT+L
Sbjct: 255 EIPE--AIANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKITEIPEAIANLTNL 312

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           T+LDLSDN I+ +P  +  L  +L  L  + N +  I   I
Sbjct: 313 TQLDLSDNKITEIPETIANL-TNLTELYFNYNKITQIAEAI 352



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 46/241 (19%)

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI-------------------WEAGE-- 220
           T  E LI +    +   +EL L G  L+ +P EI                   W      
Sbjct: 2   TQDELLILIEQAATEGWRELDLSGQELTELPGEIGKLQQLESLILGKQVGGYEWVGDRYL 61

Query: 221 --------------------ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
                               + KLD+S N ++ +P  ++    L+ LIL R +I + P+A
Sbjct: 62  KKVSGNNLKTLPLELLGLPNLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPEA 121

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I  +L++L+ L L +N + + P +    +  L  LDLS N I  +PE    ++L +L  L
Sbjct: 122 I-ANLTNLTHLILFSNQITETP-EAIAKLTNLTQLDLSDNQITEIPE--AIANLTNLTHL 177

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            L   Q+ E P  I  L  L  LDL  N +  IP+   NLT+LT+LDL DN I+ +P  +
Sbjct: 178 ILFSNQITEIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAI 237

Query: 380 G 380
            
Sbjct: 238 A 238


>gi|418730631|ref|ZP_13289125.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774840|gb|EKR54844.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 595

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 192/418 (45%), Gaps = 36/418 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ +
Sbjct: 165 LQKLWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLAT 223

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+ NN L+ LP E+G+L  L  L    N+L     E  QL+ L  L
Sbjct: 224 LPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTL 283

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E
Sbjct: 284 NLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAE 337

Query: 180 ASTTK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWE 217
               +       E L     RL   +               +EL L     S +P EI  
Sbjct: 338 DGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISR 397

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              +  L L  N ++++P E+    +L+ L L  N+++  P  I   L +L  L L  N 
Sbjct: 398 LKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEI-GQLRNLQRLSLHQNT 456

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
           L+  P++  + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L
Sbjct: 457 LKIFPAE-IEQLKKLQKLDLSVNQFTTFPK--EIGKLENLQTLNLQRNQLTNLPAEIEQL 513

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           + L+ LDL+ N    +P+    L  L  LDL +N ++ LP E+G L+ +LQ L L  N
Sbjct: 514 KNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ-NLQWLYLQNN 570



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 205/440 (46%), Gaps = 47/440 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L N  I     L +L   KN L   P+ IG L  L +L L +NR+ +
Sbjct: 119 LESLDLSENRLIILPNE-IGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTA 177

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    + NN  + LP E+G+L  L TL+L  NQL    VE  QL+ L  L
Sbjct: 178 LPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQEL 237

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL-----LTGNP-----LRTLRS-SLVNGPTPALLKYL 168
            L NN L+ LP EIG++  L+ L      LT  P     L+ L++ +LVN     L K +
Sbjct: 238 YLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 297

Query: 169 --------------------RSRLPE---NEDSEASTTKEDLI----TMATRLSVTSKEL 201
                               R R+ +   + + +     ED +     +A    +   +L
Sbjct: 298 GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDL 357

Query: 202 SLEGMNLSAI-PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
            L+  N S + P  I +   + +L L       LP E+S   +L+ L L  N +K  P  
Sbjct: 358 RLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSE 417

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I   L +L  L L+ N L ++P +    +  LQ L L  N +   P       L  LQ+L
Sbjct: 418 I-GQLRNLEALNLEANELERLPKE-IGQLRNLQRLSLHQNTLKIFP--AEIEQLKKLQKL 473

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            L   Q    P +I +L+ L+ L+L +N L ++P   + L +L ELDL+DN  + LP E+
Sbjct: 474 DLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEI 533

Query: 380 GLLEPSLQALRLDGNPLRSI 399
           G L+  LQ L L  N L ++
Sbjct: 534 GKLK-KLQTLDLRNNQLTTL 552



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 191/423 (45%), Gaps = 46/423 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G KLT L    I     L EL    NLL  +P+ IG L  L  LDL  N++ + P+
Sbjct: 53  LNLSGEKLTALPKE-IGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPA 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L    +  N L  LP E+G+L  L  L L+ N+L  +  E  QL+ L  L LS
Sbjct: 112 VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEAS 181
            N L+ LP EIG++  L+ L L  N    L         P  +  L++    N +D++ +
Sbjct: 172 ENRLTALPKEIGQLKNLQTLDLQNNQFTIL---------PKEIGQLQNLQTLNLQDNQLA 222

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
           T   ++  +        +EL L    L+ +P EI +   +  L    N +  LP E+   
Sbjct: 223 TLPVEIGQLQ-----NLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQL 277

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-------------------LRQVP 282
            +LQTL L  N++   P  I   L +L  L+L  NP                   LR+V 
Sbjct: 278 KNLQTLNLVNNRLTVLPKEI-GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 336

Query: 283 SDG-FKDIPM-----LQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDIL 334
            DG ++++ +     L++ DL     +  +  P       +L+ELYL        P +I 
Sbjct: 337 EDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEIS 396

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           RL+ L+ L L  N L+ IP     L +L  L+L  N +  LP E+G L  +LQ L L  N
Sbjct: 397 RLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLR-NLQRLSLHQN 455

Query: 395 PLR 397
            L+
Sbjct: 456 TLK 458



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 146/289 (50%), Gaps = 29/289 (10%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS   L+ LP EIG++  L++L L  N L TL         P  +  L     
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTL---------PKEIGQL----- 93

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSR 228
             E+ +    +++   +AT  +V  +   LE ++LS      +P+EI     +  L L +
Sbjct: 94  --ENLQELDLRDN--QLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYK 149

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +   P E+    +LQ L LS N++   P  I   L +L  L L NN    +P +    
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQNNQFTILPKE-IGQ 207

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  LQ L+L  N +A+LP       L +LQELYLR  +L   P +I +LQ L++L   +N
Sbjct: 208 LQNLQTLNLQDNQLATLP--VEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPEN 265

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L ++P+    L +L  L+L +N ++ LP E+G L+ +LQ L L  NPL
Sbjct: 266 RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQ-NLQDLELLMNPL 313



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 120/229 (52%), Gaps = 8/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+ E  T ++  +T A +  +  + L+L G  L+A+P EI +   + +L+L  N +  LP
Sbjct: 30  EEVEPGTYRD--LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L L  N++  +P A++  L  L  L L  N L  +P++    +  LQ L
Sbjct: 88  KEIGQLENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IGRLQNLQDL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L  N + + P+      L +LQ+L+L   +L   P +I +L+ L+ LDL  N    +P+
Sbjct: 146 GLYKNKLTTFPK--EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L  L+L DN ++ LP E+G L+ +LQ L L  N L  + + I
Sbjct: 204 EIGQLQNLQTLNLQDNQLATLPVEIGQLQ-NLQELYLRNNRLTVLPKEI 251



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 104/254 (40%), Gaps = 37/254 (14%)

Query: 18  LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           +I  +  L EL       + +P+ I  L  L  L L  N +  IPS I    +L    + 
Sbjct: 371 VILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLE 430

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
            N L  LP E+G+L  L  L LH N LK +  E  QL+ L  LDLS N  +  P EIGK+
Sbjct: 431 ANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKL 490

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L+ L L  N L  L         PA ++ L++                          
Sbjct: 491 ENLQTLNLQRNQLTNL---------PAEIEQLKN-------------------------- 515

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             +EL L     + +P EI +  ++  LDL  N +  LP E+    +LQ L L  N+   
Sbjct: 516 -LQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSF 574

Query: 257 WPDAILTSLSSLSC 270
                +  L  L C
Sbjct: 575 EEQERIRKLLPLKC 588



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 2/128 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N L +     I     L +L  S N     P+ IG L  L  L+L +N++ +
Sbjct: 447 LQRLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTN 505

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E  + +N  + LP E+GKL KL TLDL +NQL     E  QL+ L  L
Sbjct: 506 LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 565

Query: 120 DLSNNSLS 127
            L NN  S
Sbjct: 566 YLQNNQFS 573


>gi|449279622|gb|EMC87166.1| Leucine-rich repeat protein SHOC-2 [Columba livia]
          Length = 582

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 195/406 (48%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SLA  Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG    +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPEEIGSCMQITNLDLQHNELLDLPETIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-L 238
                         LS  S+ L L    LSAIP  + +  E+ +L+L  N+I  LP   L
Sbjct: 283 --------------LSSLSR-LGLRYNRLSAIPKSLAKCSELDELNLENNNISALPEGLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 181/405 (44%), Gaps = 64/405 (15%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L  L  + N L  +PE IGS  ++  LDL  N +L +P +I    SL+   +  
Sbjct: 234 IGELCNLITLDVAHNQLEHLPEEIGSCMQITNLDLQHNELLDLPETIGNLSSLSRLGLRY 293

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N LSA+P  L K S+L  L+L                       NN++S LP   G +++
Sbjct: 294 NRLSAIPKSLAKCSELDELNLE----------------------NNNISALPE--GLLSS 329

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L KL          +S  V GP                 S+ ST                
Sbjct: 330 LVKLTSLTLARNCFQSYPVGGP-----------------SQFSTI--------------- 357

Query: 199 KELSLEGMNLSAIPSEIWEAGEI-TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             L++E   ++ IP  I+   ++ +KL++  N +  LP +  +  S+  L L+ N++   
Sbjct: 358 YSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P+ + + L SL  L L NN L+++P  G  ++  L+ LDL  N + SLP    +  L  L
Sbjct: 418 PEDV-SGLVSLEVLILSNNLLKKLP-HGIGNLRKLRELDLEENKLESLPNEIAY--LKDL 473

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISAL 375
           Q+L L   QL   P  I  L  L  L L +N L  +PE    L +L EL L+DN N+ +L
Sbjct: 474 QKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSL 533

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           P EL L    L  + ++  PL  +   I+  G   ++++LK + P
Sbjct: 534 PFELALCS-KLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGP 577



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 148/315 (46%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I S   +T L    N L  +PETIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPEE-IGSCMQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPK 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C  L E  + NN +SALP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSELDELNLENNNISALPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  I    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGIGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHMLPSAIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LSSLATLYLRFNRITTVEK-DIKNLSKLT 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +PE   +   +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCMQITNLDLQHNELLDLPE 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I +++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPKSL 303


>gi|421119262|ref|ZP_15579586.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347892|gb|EKO98743.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 738

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 136/408 (33%), Positives = 199/408 (48%), Gaps = 22/408 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L N  I     L EL   KN L   P+ IG L  L  L+L  N++ +
Sbjct: 96  LESLDLSENRLVMLPNE-IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLAT 154

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L +  +  N L+ LP E+G+L  L TL+L  NQL    VE  QL+ L  L
Sbjct: 155 LPVEIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTL 214

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LS N L+  P EIG++  L++L L GN L+TL         P  +  L+     N D  
Sbjct: 215 GLSENQLTTFPKEIGQLENLQELDLNGNQLKTL---------PKEIGQLQKLEKLNLDGN 265

Query: 180 ASTT---KEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
             TT      L T+   +      + LSL    L+ +P EI +   +  LDL  N +  L
Sbjct: 266 QITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL 325

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P E++   +L+ L L+ NK+   P  I   L +L+ L+L NN +  +P +  K    LQ 
Sbjct: 326 PREINKLKNLKELYLNGNKLTIVPKEI-WELENLTILQLKNNRISTLPKEIEKS-KNLQE 383

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           L+L  N + +LP       L     L   R+++   P +I  L+ L I +LS N L SIP
Sbjct: 384 LNLRGNRLVTLPGEIGELKLLEELNLENNRIKI--LPNEIGALENLWIFNLSGNKLASIP 441

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
           +   NL +L  L L +N +  LP ++  L+  L+ L L  NPL S  R
Sbjct: 442 KEIGNLQNLRMLYLENNQLKTLPRQMEKLQ-DLEVLNLLINPLLSEER 488



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 174/387 (44%), Gaps = 50/387 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ G   T L    I     L EL    N L   P  I  L +L  LDL +NR++ +P+
Sbjct: 53  LDLSGQNFTTLPKE-IEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPN 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  +  N L   P E+G+L  L TL+L  NQL    VE  +L+ L  L+L 
Sbjct: 112 EIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLEKLNLR 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++  L+ L L  N L TL         P  +  L++            
Sbjct: 172 KNRLTVLPKEIGQLQNLQTLNLQDNQLATL---------PVEIGQLQN------------ 210

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                           + L L    L+  P EI +   + +LDL+ N ++ LP E+    
Sbjct: 211 ---------------LQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQ 255

Query: 243 SLQTLILSRNKIKDWPD--------AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
            L+ L L  N+I   P         A +  L +L  L L  N L  +P +    +  L+ 
Sbjct: 256 KLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPRE-IGQLQNLKS 314

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           LDL  N + +LP     + L +L+ELYL   +L   P +I  L+ L IL L  N + ++P
Sbjct: 315 LDLGGNQLTTLPRE--INKLKNLKELYLNGNKLTIVPKEIWELENLTILQLKNNRISTLP 372

Query: 354 EGFKNLTSLTELDLSDNNISALPPELG 380
           +  +   +L EL+L  N +  LP E+G
Sbjct: 373 KEIEKSKNLQELNLRGNRLVTLPGEIG 399



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 181/403 (44%), Gaps = 50/403 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+ GN+LT L    I     L EL  + N L  +P+ I  L  L  L L  NRI +
Sbjct: 312 LKSLDLGGNQLTTLPRE-INKLKNLKELYLNGNKLTIVPKEIWELENLTILQLKNNRIST 370

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  +  N L  LP E+G+L  L  L+L +N++K    E   L  L + 
Sbjct: 371 LPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIF 430

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS------------LVNGPTPALLKY 167
           +LS N L+ +P EIG +  LR L L  N L+TL               L+N       K 
Sbjct: 431 NLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKK 490

Query: 168 LRSRLP----ENEDSEASTTKEDL-ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 222
           +++ LP    +  D E   T  +L + +   L + S  LSLE    S  P EI     + 
Sbjct: 491 IQALLPNCNIDLRDVEEGGTYRNLNLALEQPLKILS--LSLEYQQFSLFPKEILRLKNLR 548

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQ 280
            L L   S+  LP E+     L+ L L  N++K  P  I  L +L SL      NN    
Sbjct: 549 SLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGA--NNEFEV 606

Query: 281 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
           +P    K+I  LQ                     +L+ L L + + +  P +I  L++L 
Sbjct: 607 LP----KEIARLQ---------------------NLRSLLLNQNRFKIFPKEIWELKKLV 641

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
           IL+++ N L ++PE    L  L  LDLS N ++ LP E+G L 
Sbjct: 642 ILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLH 684



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 154/326 (47%), Gaps = 25/326 (7%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + +LDLS  + + LP EI ++  L++L L  N L T  + +V       L    +RL 
Sbjct: 48  LNVRILDLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLV 107

Query: 174 E--NEDS------EASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITK 223
              NE        E    K  LIT    +      + L+L+   L+ +P EI     + K
Sbjct: 108 MLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLEK 167

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           L+L +N +  LP E+    +LQTL L  N++   P  I   L +L  L L  N L   P 
Sbjct: 168 LNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEI-GQLQNLQTLGLSENQLTTFPK 226

Query: 284 DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL---------RRMQLREAPTDI 333
           +    +  LQ LDL+ N + +LP+      L  L++L L         +  QL   P +I
Sbjct: 227 E-IGQLENLQELDLNGNQLKTLPKE--IGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEI 283

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
            +L+ L+IL LS N L ++P     L +L  LDL  N ++ LP E+  L+ +L+ L L+G
Sbjct: 284 GQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLK-NLKELYLNG 342

Query: 394 NPLRSIRRTILDRGTKAVLKYLKDKI 419
           N L  + + I +     +L+   ++I
Sbjct: 343 NKLTIVPKEIWELENLTILQLKNNRI 368



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 115/217 (52%), Gaps = 6/217 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L G N + +P EI +   + +LDL  N +   P  +     L++L
Sbjct: 40  LTKALQNPLNVRILDLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESL 99

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            LS N++   P+ I   L +L  L L  N L   P +    +  LQ L+L  N +A+LP 
Sbjct: 100 DLSENRLVMLPNEI-GRLQNLQELGLYKNKLITFPKE-IGQLQNLQTLNLQDNQLATLP- 156

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +L++L LR+ +L   P +I +LQ L+ L+L  N L ++P     L +L  L 
Sbjct: 157 -VEIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLG 215

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           LS+N ++  P E+G LE +LQ L L+GN L+++ + I
Sbjct: 216 LSENQLTTFPKEIGQLE-NLQELDLNGNQLKTLPKEI 251



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 2/136 (1%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI-PSSISGCCSLAEFYMG 77
           I     L  L    N L  +P+ IG L  L  LD+  N    + P  I+   +L    + 
Sbjct: 564 IVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLN 623

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
            N     P E+ +L KL  L++++NQL     +  +L+ L +LDLS+N L+ LP EIG++
Sbjct: 624 QNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQL 683

Query: 137 TTLRKLLLTGNPLRTL 152
             L +L L  N ++ L
Sbjct: 684 HNLTELYLQYNRIKML 699



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 22  WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W +  L  L  + N L+ +PE IG L  L  LDL  NR+ ++PS I    +L E Y+  N
Sbjct: 635 WELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYN 694

Query: 80  ALSALPAELGKLSKLGTLDLHSN 102
            +  LP E+ +L  L  L L+ N
Sbjct: 695 RIKMLPEEIARLQNLRKLTLYEN 717


>gi|428164461|gb|EKX33486.1| hypothetical protein GUITHDRAFT_81410 [Guillardia theta CCMP2712]
          Length = 493

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 205/401 (51%), Gaps = 48/401 (11%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           + N+L  +P+T+G L  +  L  + N++ ++P++I  C +L +  +  NA+SALP E+G+
Sbjct: 96  NHNMLRSLPQTVGFLRLMSELKCNANQLTTVPTTIGECTALRQLDLSFNAISALPLEIGR 155

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L+K+  L L++N+L         +  L  L+L  N L GLP E+G +  L+ L++  N L
Sbjct: 156 LTKMKQLLLNNNRLDSIPASIGTMTLLQELNLFENPLKGLPTELGNIQKLKTLVVDVNQL 215

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPEN--EDSEAS----TTKEDLITMATRLSVTSKE--- 200
           RTL +++      AL +    +L +N  E+  AS    T+   LI     L     E   
Sbjct: 216 RTLPATI-----GALGQLRELQLGDNRIENLPASIGSLTSLNTLILTDNNLPEIPAEIGY 270

Query: 201 ------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
                 LSL G  ++++P EI     +  L+L++NS+  LP  +   A LQ L L  N++
Sbjct: 271 LTNLTFLSLSGNPITSLPLEIGGLSALRALNLAKNSLISLPVSIGDLALLQVLHLHENEL 330

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPS-------------DG--FKDIPM-------L 292
           +  P++I   LS+L+ L+LD+N L  +P              DG     +P+       L
Sbjct: 331 EALPESI-GDLSALTDLRLDHNNLTSLPPEVGVMSSLTELLLDGNQLNTLPLSIGRLTEL 389

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           Q+L+L  N ++ LP  P  + +  L+EL++   +L   P  I  L  L +L LS N L  
Sbjct: 390 QVLNLDGNRLSLLP--PEVAGMTALRELWVHDNKLSVVPEGIADLTNLNVLTLSNNELTV 447

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
           +P     L SL EL + DNN+ + P   GLL P+L+ L +D
Sbjct: 448 LPANMTRLVSLNELWIKDNNLKSHPFRQGLL-PNLRVLLVD 487



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 193/409 (47%), Gaps = 64/409 (15%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   + L  L    N ++ +P +IG L+ +  L L  N++ S+P+      +L    + +
Sbjct: 15  IGMLSSLATLWVDHNQISELPPSIGQLNNVQSLALDFNQLNSLPNQFGDMTALVTLTISH 74

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLK-------------EYCVEACQLR---------- 115
           N L  LP  +G L  L  LDL+ N L+             E    A QL           
Sbjct: 75  NLLKYLPTSIGNLPNLRILDLNHNMLRSLPQTVGFLRLMSELKCNANQLTTVPTTIGECT 134

Query: 116 -LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
            L  LDLS N++S LP EIG++T +++LLL  N L ++ +S+    T  LL+ L   L E
Sbjct: 135 ALRQLDLSFNAISALPLEIGRLTKMKQLLLNNNRLDSIPASI---GTMTLLQEL--NLFE 189

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
           N      T   ++  +        K L ++   L  +P+ I   G++ +L L  N I+ L
Sbjct: 190 NPLKGLPTELGNIQKL--------KTLVVDVNQLRTLPATIGALGQLRELQLGDNRIENL 241

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P  + S  SL TLIL+ N + + P  I   L++L+ L L  NP+  +P +          
Sbjct: 242 PASIGSLTSLNTLILTDNNLPEIPAEI-GYLTNLTFLSLSGNPITSLPLE---------- 290

Query: 295 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
                             L  L+ L L +  L   P  I  L  L++L L +N L+++PE
Sbjct: 291 ---------------IGGLSALRALNLAKNSLISLPVSIGDLALLQVLHLHENELEALPE 335

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              +L++LT+L L  NN+++LPPE+G++  SL  L LDGN L ++  +I
Sbjct: 336 SIGDLSALTDLRLDHNNLTSLPPEVGVMS-SLTELLLDGNQLNTLPLSI 383


>gi|421091300|ref|ZP_15552074.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|409999904|gb|EKO50586.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 400

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 126/372 (33%), Positives = 184/372 (49%), Gaps = 47/372 (12%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+  L  +P  IG L  L  L L  N++ ++P+ I    +L    +  N L+ LP E+G+
Sbjct: 54  SEQKLKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLTTLPNEIGQ 113

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L TLDL  NQL     E  QL+ L VL LSNN L  LP EIG++  L+ L L  N L
Sbjct: 114 LINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYANQL 173

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
           + L + +        LK L++                              L L    L+
Sbjct: 174 KALPNEI------GQLKNLQT------------------------------LDLSKNILT 197

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P EI +   + +L LS N ++ LP E+    +LQTL LS N++   P+ I   L +L 
Sbjct: 198 ILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEI-GQLKNLY 256

Query: 270 CLKLDNNPLRQVPSD--GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
            L L  N L  +P +    K++P L   DLS N + +LP+      L +L+ELYL   Q 
Sbjct: 257 ELYLGKNLLTTLPKEVGQLKNLPTL---DLSNNRLTTLPK--EIGQLKNLRELYLGTNQF 311

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
              P +I +LQ L++L L+ N L+++P   + L +L  LDL+DN +  LP E+  L+ +L
Sbjct: 312 TALPKEIRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPKEIEKLQ-NL 370

Query: 387 QALRLDGNPLRS 398
           Q L L  N L S
Sbjct: 371 QRLYLQYNQLSS 382



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/331 (34%), Positives = 169/331 (51%), Gaps = 22/331 (6%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
            N+LT L N  I     L  L    N L  +P  IG L  L  LDL  N+++ +P  I+ 
Sbjct: 78  NNQLTTLPNE-IGQLKNLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQ 136

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 126
             +L    + NN L  LP E+G+L  L TLDL++NQLK    E  QL+ L  LDLS N L
Sbjct: 137 LQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNIL 196

Query: 127 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKE 185
           + LP EIG++  LR+L L+ N L+TL   +        L+ L++  L +N+     TT  
Sbjct: 197 TILPKEIGQLKNLRELYLSSNQLKTLPKEI------GQLENLQTLHLSDNQ----LTTLP 246

Query: 186 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 245
           + I     L     EL L    L+ +P E+ +   +  LDLS N +  LP E+    +L+
Sbjct: 247 NEIGQLKNLY----ELYLGKNLLTTLPKEVGQLKNLPTLDLSNNRLTTLPKEIGQLKNLR 302

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASL 304
            L L  N+    P  I   L +L  L L+NN L+ +P++  + +  LQ+LDL+ N + +L
Sbjct: 303 ELYLGTNQFTALPKEI-RQLQNLQVLFLNNNQLKTLPNE-IEKLQNLQVLDLNDNQLKTL 360

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILR 335
           P+      L +LQ LYL+  QL     + +R
Sbjct: 361 PK--EIEKLQNLQRLYLQYNQLSSEEKERIR 389



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 149/303 (49%), Gaps = 28/303 (9%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RL 172
           L + VLDLS   L  LP EIG++  L+ L L  N L TL + +        LK L++  L
Sbjct: 46  LDVRVLDLSEQKLKTLPNEIGQLQNLQTLYLWNNQLTTLPNEI------GQLKNLQTLNL 99

Query: 173 PENEDSEASTTKEDLITMAT------RLSVTSKE---------LSLEGMNLSAIPSEIWE 217
             N+ +        LI + T      +L +  KE         L L    L  +P EI +
Sbjct: 100 DTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQ 159

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              +  LDL  N ++ LP E+    +LQTL LS+N +   P  I   L +L  L L +N 
Sbjct: 160 LENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKEI-GQLKNLRELYLSSNQ 218

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
           L+ +P +    +  LQ L LS N + +LP       L +L ELYL +  L   P ++ +L
Sbjct: 219 LKTLPKE-IGQLENLQTLHLSDNQLTTLPN--EIGQLKNLYELYLGKNLLTTLPKEVGQL 275

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           + L  LDLS N L ++P+    L +L EL L  N  +ALP E+  L+ +LQ L L+ N L
Sbjct: 276 KNLPTLDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKEIRQLQ-NLQVLFLNNNQL 334

Query: 397 RSI 399
           +++
Sbjct: 335 KTL 337



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 84/150 (56%), Gaps = 2/150 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  N+LT L N  I     L EL   KNLL  +P+ +G L  L  LDL  NR+ +
Sbjct: 232 LQTLHLSDNQLTTLPNE-IGQLKNLYELYLGKNLLTTLPKEVGQLKNLPTLDLSNNRLTT 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+G N  +ALP E+ +L  L  L L++NQLK    E  +L+ L VL
Sbjct: 291 LPKEIGQLKNLRELYLGTNQFTALPKEIRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           DL++N L  LP EI K+  L++L L  N L
Sbjct: 351 DLNDNQLKTLPKEIEKLQNLQRLYLQYNQL 380



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 82/153 (53%), Gaps = 2/153 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N LT+L    I     L EL  S N L  +P+ IG L  L  L L  N++ +
Sbjct: 186 LQTLDLSKNILTILPKE-IGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTT 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E Y+G N L+ LP E+G+L  L TLDL +N+L     E  QL+ L  L
Sbjct: 245 LPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLPTLDLSNNRLTTLPKEIGQLKNLREL 304

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
            L  N  + LP EI ++  L+ L L  N L+TL
Sbjct: 305 YLGTNQFTALPKEIRQLQNLQVLFLNNNQLKTL 337



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 111/213 (52%), Gaps = 6/213 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L    L  +P+EI +   +  L L  N +  LP E+    +LQTL
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTL 97

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            L  N++   P+ I   L +L  L L +N L  +P +    +  L++L LS N +  LP+
Sbjct: 98  NLDTNQLTTLPNEI-GQLINLQTLDLIHNQLVILPKE-INQLQNLRVLGLSNNQLKILPK 155

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +LQ L L   QL+  P +I +L+ L+ LDLS+N L  +P+    L +L EL 
Sbjct: 156 --EIGQLENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELY 213

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LS N +  LP E+G LE +LQ L L  N L ++
Sbjct: 214 LSSNQLKTLPKEIGQLE-NLQTLHLSDNQLTTL 245


>gi|113477255|ref|YP_723316.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
 gi|110168303|gb|ABG52843.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
          Length = 1041

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 190/387 (49%), Gaps = 41/387 (10%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +PE+IG LS L  L L  N++ S+P SI+   +L E Y+  N L++LP  + KLS
Sbjct: 59  NELTSLPESIGKLSNLTSLYLVNNKLTSLPESITKLSNLTELYLDGNQLTSLPESITKLS 118

Query: 93  KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
            L  L L  N+L        +L  L+ LDL  N L+ LP  I K++ L +L L  N L  
Sbjct: 119 NLTELYLSVNKLTSLPESIGKLSNLTSLDLGGNQLTSLPESITKLSNLTELYLGHNQL-- 176

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
                             + LPE+            IT  + L+    EL L    L+++
Sbjct: 177 ------------------TSLPES------------ITKLSNLT----ELYLGHNQLTSL 202

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P  I +   +T LDLS N +  LP  ++  ++L +L L  N++   P++I T+LS+L+ L
Sbjct: 203 PESITKLSNLTSLDLSWNKLTSLPESITKLSNLTSLYLGSNQLTSLPESI-TTLSNLTVL 261

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 331
            L +N L  +P    K   + ++      +  LPE+   + L +L +L LR  QL   P 
Sbjct: 262 DLGSNQLTSMPESITKLSNLTELYLDGNQLTRLPES--ITKLSNLTKLDLRNNQLTRLPE 319

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
            I +L  L  L+LS N L S+PE    L++LT L L DN ++ LP  +  L  +L  L L
Sbjct: 320 SITKLSNLTKLNLSWNKLTSLPESIGKLSNLTSLYLRDNQLTILPESITTL-SNLGWLYL 378

Query: 392 DGNPLRSIRRTILDRGTKAVLKYLKDK 418
           + NPL +    I  +G + +  Y + +
Sbjct: 379 NNNPLENPPIEIATKGIQEIRDYFQQE 405



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/344 (34%), Positives = 177/344 (51%), Gaps = 21/344 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L ++GN+LT L  + I   + LTEL  S N L  +PE+IG LS L  LDL  N++ S
Sbjct: 97  LTELYLDGNQLTSLPES-ITKLSNLTELYLSVNKLTSLPESIGKLSNLTSLDLGGNQLTS 155

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P SI+   +L E Y+G+N L++LP  + KLS L  L L  NQL        +L  L+ L
Sbjct: 156 LPESITKLSNLTELYLGHNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTSL 215

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DLS N L+ LP  I K++ L  L L  N L +L  S+       +L    ++L       
Sbjct: 216 DLSWNKLTSLPESITKLSNLTSLYLGSNQLTSLPESITTLSNLTVLDLGSNQL------- 268

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             T+  + IT  + L+    EL L+G  L+ +P  I +   +TKLDL  N +  LP  ++
Sbjct: 269 --TSMPESITKLSNLT----ELYLDGNQLTRLPESITKLSNLTKLDLRNNQLTRLPESIT 322

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
             ++L  L LS NK+   P++I   LS+L+ L L +N L  +P    + I  L  L   Y
Sbjct: 323 KLSNLTKLNLSWNKLTSLPESI-GKLSNLTSLYLRDNQLTILP----ESITTLSNLGWLY 377

Query: 300 NIASLPENPPFS-SLPHLQELYLRRMQLREAPTDILRLQQLRIL 342
              +  ENPP   +   +QE+     Q RE   D +   +L I+
Sbjct: 378 LNNNPLENPPIEIATKGIQEIRDYFQQEREKGIDYIYEAKLLIV 421



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 1/88 (1%)

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           L+ LYL   +L E P D+  L+QL +LDL  N L S+PE    L++LT L L +N +++L
Sbjct: 28  LKWLYLSGCKLTEVPGDVWELEQLEVLDLGSNELTSLPESIGKLSNLTSLYLVNNKLTSL 87

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P  +  L  +L  L LDGN L S+  +I
Sbjct: 88  PESITKL-SNLTELYLDGNQLTSLPESI 114


>gi|195452978|ref|XP_002073584.1| GK13066 [Drosophila willistoni]
 gi|194169669|gb|EDW84570.1| GK13066 [Drosophila willistoni]
          Length = 650

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 211/472 (44%), Gaps = 83/472 (17%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD   NKL  L    I     LT L+   N +  +P  + ++  L +LDL QN I+ +P 
Sbjct: 206 LDASHNKLQSLPGG-IGFLVRLTSLLLPYNHIKELPPDLVNMRVLQKLDLMQNDIIKLPD 264

Query: 64  SIS----------------------GCCSLAEFYMGNNALSALPAEL-GKLSKLGTLDLH 100
            +                       G  +L E +  NN ++++P  L   L  L   DL 
Sbjct: 265 DMGLIRKLECLYIQHNDIKELPEFEGNEALTEVHASNNYITSIPKGLCTNLPHLKIFDLR 324

Query: 101 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 159
            NQ+ +   E C LR L  LD+SNNS+S LP  +  +  L  L + GNP++T+R  ++  
Sbjct: 325 DNQITQLPDEVCLLRNLQRLDVSNNSISVLPVTLSSLAHLVNLQVEGNPIKTIRRDIIQC 384

Query: 160 PTPALLKYLRSR--------------------LPENEDS---EASTTKEDLI--TMATRL 194
            T  +LK L+ R                    L E  D+       T + ++      R 
Sbjct: 385 GTTRILKVLQDRAQAQPKEKGGANGGSGSGGSLTETMDALRLGGGQTNDGIMPENFPDRY 444

Query: 195 SV-TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASL-QTLIL 249
            +  +  L++    L+ +P +++E      +  +D +RN +  LP  L     L + L+L
Sbjct: 445 KLRHTHTLAVNLEELTNVPDQVFEIARSENVNVVDFARNKLGTLPNGLQYMRDLVKELVL 504

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP 309
           S N I   P  I +  + ++ L L NN L+++P +                         
Sbjct: 505 SHNLISFVPQFI-SQFTRITFLNLSNNLLKELPKE------------------------- 538

Query: 310 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLS 368
           F  L  L+EL +   +    P+ +  LQ+L IL  S+N ++ +   G K ++ L  LDL 
Sbjct: 539 FGVLNTLRELNIANNRFDCIPSCLYELQRLEILVASENHIKELNVSGLKAMSCLATLDLR 598

Query: 369 DNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           +N+I  +PP LG L  ++  L L GNP R  R  IL +GT++++ YL+D+IP
Sbjct: 599 NNDIEFIPPILGNLT-NITHLELIGNPFRQPRHQILIKGTESIMSYLRDRIP 649



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 176/372 (47%), Gaps = 71/372 (19%)

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA-----CQLRLSVLDLSNNSLS--- 127
           + N  L+ +P +L  ++ +   D  +  L++ C++       Q+ ++ LDLS+N+LS   
Sbjct: 67  LSNKGLARVPQKLYDINDVDE-DSKAANLEQLCIKEEDAWWNQVPITNLDLSSNTLSRLS 125

Query: 128 --------------------GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 167
                                LPP+IGK+  L +L L+ N L  L   L + P   +L++
Sbjct: 126 PKIENLMTLTVLILHDNALVELPPQIGKLEKLTRLNLSHNKLSQLPRELFSLP---VLRH 182

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
           L   +  NE +E +    DL  M   L  +  +       L ++P  I     +T L L 
Sbjct: 183 L--NISYNEFTELNPDVSDL-HMLEWLDASHNK-------LQSLPGGIGFLVRLTSLLLP 232

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            N I+ELPP+L +   LQ L L +N I   PD  +  +  L CL + +N ++++P   F+
Sbjct: 233 YNHIKELPPDLVNMRVLQKLDLMQNDIIKLPDD-MGLIRKLECLYIQHNDIKELPE--FE 289

Query: 288 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
               L  +  S N I S+P+    ++LPH                       L+I DL  
Sbjct: 290 GNEALTEVHASNNYITSIPKG-LCTNLPH-----------------------LKIFDLRD 325

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDR 406
           N +  +P+    L +L  LD+S+N+IS LP  L  L   L  L+++GNP+++IRR I+  
Sbjct: 326 NQITQLPDEVCLLRNLQRLDVSNNSISVLPVTLSSL-AHLVNLQVEGNPIKTIRRDIIQC 384

Query: 407 GTKAVLKYLKDK 418
           GT  +LK L+D+
Sbjct: 385 GTTRILKVLQDR 396



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 169/411 (41%), Gaps = 55/411 (13%)

Query: 20  ASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           A W    +T L  S N L+ +   I +L  L  L LH N ++ +P  I     L    + 
Sbjct: 104 AWWNQVPITNLDLSSNTLSRLSPKIENLMTLTVLILHDNALVELPPQIGKLEKLTRLNLS 163

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           +N LS LP EL  L  L  L++  N+  E   +   L  L  LD S+N L  LP  IG +
Sbjct: 164 HNKLSQLPRELFSLPVLRHLNISYNEFTELNPDVSDLHMLEWLDASHNKLQSLPGGIGFL 223

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-------------------------- 170
             L  LLL  N ++ L   LVN      L  +++                          
Sbjct: 224 VRLTSLLLPYNHIKELPPDLVNMRVLQKLDLMQNDIIKLPDDMGLIRKLECLYIQHNDIK 283

Query: 171 RLPENEDSEAST---TKEDLITMATRLSVTS----KELSLEGMNLSAIPSEIWEAGEITK 223
            LPE E +EA T      + IT   +   T+    K   L    ++ +P E+     + +
Sbjct: 284 ELPEFEGNEALTEVHASNNYITSIPKGLCTNLPHLKIFDLRDNQITQLPDEVCLLRNLQR 343

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           LD+S NSI  LP  LSS A L  L +  N IK     I+    +   LK+  +  +  P 
Sbjct: 344 LDVSNNSISVLPVTLSSLAHLVNLQVEGNPIKTIRRDIIQC-GTTRILKVLQDRAQAQPK 402

Query: 284 DGF-------------KDIPMLQILDLSYNIASLPEN-PPFSSLPHLQELYLRRMQLREA 329
           +               + +  L++     N   +PEN P    L H   L +   +L   
Sbjct: 403 EKGGANGGSGSGGSLTETMDALRLGGGQTNDGIMPENFPDRYKLRHTHTLAVNLEELTNV 462

Query: 330 PT---DILRLQQLRILDLSQNSLQSIPEGFKNLTSLT-ELDLSDNNISALP 376
           P    +I R + + ++D ++N L ++P G + +  L  EL LS N IS +P
Sbjct: 463 PDQVFEIARSENVNVVDFARNKLGTLPNGLQYMRDLVKELVLSHNLISFVP 513


>gi|383849806|ref|XP_003700527.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Megachile rotundata]
          Length = 604

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 134/501 (26%), Positives = 221/501 (44%), Gaps = 136/501 (27%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L ++ NKL  LS   I    MLT L  S N L+ +P  +G L RL  LDL  N +  
Sbjct: 156 LRELCLKNNKLNKLSP-AIGDLIMLTHLDLSNNNLSELPIGMGYLVRLKSLDLSHNLLTE 214

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY------------- 107
           +P  ++   +L +     N L  LP  +G L K+ T+ L +N+L  +             
Sbjct: 215 LPPDLTNIRALQKLDASCNQLEVLPP-MGDLRKVETVMLQTNKLTTFPDMSGCTLLRILH 273

Query: 108 ------------CVEAC-QLR---------------------LSVLDLSNNSLSGLPPEI 133
                       C+E   QL+                     L + DLS+N L+ +P  +
Sbjct: 274 LADNNITEIDMSCLEGVGQLKVLTLGNNKIETIPEDIIKMVYLEIFDLSHNKLTMIPSYV 333

Query: 134 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 193
           G M  L++ ++ GN ++ +R+ ++   TP +LK++R  +    +S    TKE +I+ A +
Sbjct: 334 GIMPNLKQFVINGNDVQNIRADIIRCGTPRILKHIRQSI----ESTNLNTKECVISDANQ 389

Query: 194 -------LSVTSKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNSIQELPPELSSCAS 243
                     ++K LSL G+NL+ +P E+ E     ++  +DLSRN + ELP ++   A 
Sbjct: 390 SIYPDKYTMQSTKLLSLAGLNLTELPQEVLENACKADVGTVDLSRNKLSELPDQMCVIAK 449

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 303
           +  L L+ N++   P+ I                      + +K                
Sbjct: 450 VADLKLTSNELTHLPEWI---------------------GEKYK---------------- 472

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL- 362
                      HLQ L L R  L   P+ +  L+ LR L++S N  + IPE   ++ SL 
Sbjct: 473 -----------HLQALDLSRNFLESLPSTLSLLKYLRELNISFNRYKKIPESVYDIDSLE 521

Query: 363 ---------TELD--------------LSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
                    T++D              L +NNI  +PPELG L+ ++++L L GN  +  
Sbjct: 522 ILIANDNSITDIDVPSLQKLQKLAILNLGNNNIGYVPPELGNLK-NIRSLFLSGNLFKQP 580

Query: 400 RRTILDRGTKAVLKYLKDKIP 420
           R+ IL + T+ +L YL+D+IP
Sbjct: 581 RQAILAKSTEEILAYLRDRIP 601



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 26/225 (11%)

Query: 165 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
           L   + R   ++++E S    ++I ++ R    +  L+L    LS +P+++W   E+T  
Sbjct: 11  LAVFKQRTKTDDNAELS----EVIIISAR---KTGNLNLSSRGLSTVPNKVWSINELTD- 62

Query: 225 DLSRNSIQELPPELSSCAS---------LQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
                 ++EL  EL              L+TL LS N +    D+ +  LS L+ L L +
Sbjct: 63  ----EEVKELHYELDYVHENERWWEQELLKTLDLSFNSLV-VIDSKIECLSELTTLLLHD 117

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N L  +P +   ++  L++L+LS N +  LP    F  L  L+EL L+  +L +    I 
Sbjct: 118 NLLENLPPE-IGNLKKLEVLNLSNNKLKQLPHQ--FYQLNELRELCLKNNKLNKLSPAIG 174

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            L  L  LDLS N+L  +P G   L  L  LDLS N ++ LPP+L
Sbjct: 175 DLIMLTHLDLSNNNLSELPIGMGYLVRLKSLDLSHNLLTELPPDL 219


>gi|421099974|ref|ZP_15560616.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796955|gb|EKR99072.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 398

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 121/375 (32%), Positives = 185/375 (49%), Gaps = 46/375 (12%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +P+ IG L  L  LDL  N++ ++P  I     L   ++ +N L++LP ++  L 
Sbjct: 50  NQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLTSLPKDIEHLK 109

Query: 93  KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
           +L  L L  NQL     +   L+ L  L L  N L+ LP EIG +  L+ L L  N L T
Sbjct: 110 ELQELHLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPKEIGYLKELQVLHLYDNQLTT 169

Query: 152 LRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
           L         P  + YL+  ++    D++ +T  ++ I     L V    L L    L+ 
Sbjct: 170 L---------PKEIGYLKELQVLHLYDNQLTTLPKE-IGYLKELQV----LHLYDNQLTT 215

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +P EI +   +  L+L+ N ++ LP E+    +LQ L LS NK+   P+ I   L +L  
Sbjct: 216 LPKEIGKLQNLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPNDI-GKLQNLQE 274

Query: 271 LKLDNNPLRQVPSD-GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 329
           L L NN L  +P D G+  +  LQIL+L+ N                        QL+  
Sbjct: 275 LYLTNNQLTTLPKDIGY--LKELQILELTNN------------------------QLKTL 308

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
           P +I +LQ L++L+LS N L ++P+    L +L EL L++N ++ LP ++G L+  LQ L
Sbjct: 309 PKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTLPKDIGYLK-ELQIL 367

Query: 390 RLDGNP-LRSIRRTI 403
            LD  P LRS  + I
Sbjct: 368 HLDDIPALRSQEKKI 382



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 113/330 (34%), Positives = 172/330 (52%), Gaps = 20/330 (6%)

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 134
           + +N L+ LP ++G+L  L  LDL +NQL     E   L+ L VL LS+N L+ LP +I 
Sbjct: 47  LKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLTSLPKDIE 106

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            +  L++L L  N L TL         P  +++L+     + D    TT    I     L
Sbjct: 107 HLKELQELHLDYNQLTTL---------PKDIEHLKELQELHLDYNQLTTLPKEIGYLKEL 157

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
            V    L L    L+ +P EI    E+  L L  N +  LP E+     LQ L L  N++
Sbjct: 158 QV----LHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQL 213

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 313
              P  I   L +L  L+L NN L+ +P +    +  LQ+L+LS+N + +LP +     L
Sbjct: 214 TTLPKEI-GKLQNLQVLELTNNQLKTLPKE-IGQLQNLQVLNLSHNKLTTLPND--IGKL 269

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
            +LQELYL   QL   P DI  L++L+IL+L+ N L+++P+    L +L  L+LS N ++
Sbjct: 270 QNLQELYLTNNQLTTLPKDIGYLKELQILELTNNQLKTLPKEIGQLQNLQVLNLSHNKLT 329

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            LP ++G L+ +LQ L L  N L ++ + I
Sbjct: 330 TLPKDIGKLQ-NLQELYLTNNQLTTLPKDI 358



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 157/344 (45%), Gaps = 43/344 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+LT L    I     L  L  S N L  +P+ I  L  L  L L  N++ ++P 
Sbjct: 68  LDLTNNQLTALPKE-IEHLKELQVLHLSHNKLTSLPKDIEHLKELQELHLDYNQLTTLPK 126

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L E ++  N L+ LP E+G L +L  L L+ NQL     E   L+ L VL L 
Sbjct: 127 DIEHLKELQELHLDYNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLY 186

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N L+ LP EIG +  L+ L L  N L TL                              
Sbjct: 187 DNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKE--------------------------- 219

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                I     L V    L L    L  +P EI +   +  L+LS N +  LP ++    
Sbjct: 220 -----IGKLQNLQV----LELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPNDIGKLQ 270

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +LQ L L+ N++   P  I   L  L  L+L NN L+ +P +    +  LQ+L+LS+N +
Sbjct: 271 NLQELYLTNNQLTTLPKDI-GYLKELQILELTNNQLKTLPKE-IGQLQNLQVLNLSHNKL 328

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
            +LP++     L +LQELYL   QL   P DI  L++L+IL L 
Sbjct: 329 TTLPKD--IGKLQNLQELYLTNNQLTTLPKDIGYLKELQILHLD 370



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 130/278 (46%), Gaps = 39/278 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L ++ N+LT L    I     L  L    N L  +P+ IG L  L  L L+ N++ +
Sbjct: 134 LQELHLDYNQLTTLPKE-IGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTT 192

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I     L   ++ +N L+ LP E+GKL  L  L+L +NQLK    E  QL+ L VL
Sbjct: 193 LPKEIGYLKELQVLHLYDNQLTTLPKEIGKLQNLQVLELTNNQLKTLPKEIGQLQNLQVL 252

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +LS+N L+ LP +IGK+  L++L LT N L TL         P  + YL+          
Sbjct: 253 NLSHNKLTTLPNDIGKLQNLQELYLTNNQLTTL---------PKDIGYLKE--------- 294

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                         L +    L L    L  +P EI +   +  L+LS N +  LP ++ 
Sbjct: 295 --------------LQI----LELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIG 336

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              +LQ L L+ N++   P  I   L  L  L LD+ P
Sbjct: 337 KLQNLQELYLTNNQLTTLPKDI-GYLKELQILHLDDIP 373



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 6/105 (5%)

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           YN+    +NP    +     L L+  QL   P DI +LQ L++LDL+ N L ++P+  ++
Sbjct: 30  YNLTEALQNPTDVRI-----LDLKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEH 84

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L  L  L LS N +++LP ++  L+  LQ L LD N L ++ + I
Sbjct: 85  LKELQVLHLSHNKLTSLPKDIEHLK-ELQELHLDYNQLTTLPKDI 128


>gi|255081704|ref|XP_002508074.1| predicted protein [Micromonas sp. RCC299]
 gi|226523350|gb|ACO69332.1| predicted protein [Micromonas sp. RCC299]
          Length = 344

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 121/356 (33%), Positives = 177/356 (49%), Gaps = 42/356 (11%)

Query: 46  SRLIRLDLHQ-NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 104
            R++ LDL   +   ++P+ +    +L E  +  NAL+ LP E+G+L+ L  L L  NQL
Sbjct: 5   GRVVELDLEDVDLTAALPAELGRLSALRELNVSRNALTLLPVEIGQLTSLVKLSLTENQL 64

Query: 105 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 163
                E  QL  L VLDLS+N L+ LP EIG +T L++L L GN L ++ + +       
Sbjct: 65  TSVPAEIGQLASLRVLDLSDNQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQ----- 119

Query: 164 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 223
            L  LR  L +  D+E ++   + I   T L V    L L    L+++P+EI +   +T+
Sbjct: 120 -LTSLRKLLLD--DNELTSVPAE-IGQLTSLEV----LGLTDNQLTSVPAEIGQLASLTE 171

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
             LS N +  +P E+   ASL  L LS N++   P A +  L+SL  L LD+N L  VP 
Sbjct: 172 SGLSGNRLASVPAEIGLLASLTELFLSGNQLTSVP-AEIGQLTSLQELWLDDNELTSVPE 230

Query: 284 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
           +                            L  L  L LR  +L   P ++ +L  L+ L 
Sbjct: 231 E-------------------------TGQLASLMVLSLRDNELTSVPAEVGQLTSLKSLY 265

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L  N L S+P     LT LTEL L DN ++++P E+G L  SL+ L LD N L S+
Sbjct: 266 LYGNQLTSVPAEIGQLTLLTELFLDDNELTSVPAEIGQLR-SLEKLYLDDNKLTSV 320



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 47/83 (56%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +P  +G L+ L  L L+ N++ S+P+ I     L E ++ +N L+++PAE+G+L 
Sbjct: 246 NELTSVPAEVGQLTSLKSLYLYGNQLTSVPAEIGQLTLLTELFLDDNELTSVPAEIGQLR 305

Query: 93  KLGTLDLHSNQLKEYCVEACQLR 115
            L  L L  N+L     E  +LR
Sbjct: 306 SLEKLYLDDNKLTSVPAEIRELR 328



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 40/77 (51%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +   T L  L    N L  +P  IG L+ L  L L  N + S+P+ I    SL + Y+ +
Sbjct: 255 VGQLTSLKSLYLYGNQLTSVPAEIGQLTLLTELFLDDNELTSVPAEIGQLRSLEKLYLDD 314

Query: 79  NALSALPAELGKLSKLG 95
           N L+++PAE+ +L   G
Sbjct: 315 NKLTSVPAEIRELRAAG 331


>gi|302835578|ref|XP_002949350.1| hypothetical protein VOLCADRAFT_89724 [Volvox carteri f.
           nagariensis]
 gi|300265177|gb|EFJ49369.1| hypothetical protein VOLCADRAFT_89724 [Volvox carteri f.
           nagariensis]
          Length = 383

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 169/373 (45%), Gaps = 64/373 (17%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L +L  S N L  +PE IG+L +L  L L  N + S+P  ++    L + ++  N L  L
Sbjct: 37  LQKLWLSNNGLRKLPEEIGNLPQLDSLWLGSNLLRSLPGGVTQMTQLKKLWLPANMLVRL 96

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           PAE+  ++ L  LD+  N+L+E C E  QL  L+ LDL  N L GLPP IG++T ++ L 
Sbjct: 97  PAEVCAITSLEWLDVSENKLEEVCAEIGQLTSLTRLDLHTNVLKGLPPTIGRLTRVKHLS 156

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L +L                                   I   T L      LSL
Sbjct: 157 LHFNQLESLPPD--------------------------------IGQCTSLVW----LSL 180

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
               L  +P+E+ E   + +L L  N ++ +PPEL     L+ L L +N++   P  +  
Sbjct: 181 NANQLKQLPTEMGELTGLVRLSLHINELESVPPELGRLTGLEALSLHKNRLTRLPPELPL 240

Query: 264 SLSSLSC-LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLR 322
            L+   C L L  N L +VP                         P   ++  LQEL+L 
Sbjct: 241 GLAGSCCRLSLYENQLGEVP-------------------------PELGNMGLLQELWLY 275

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
             QL   P+++ RL +LR L L +N L S+P     LT L EL L  N +  LP ELG L
Sbjct: 276 SNQLTSVPSELGRLGELRRLWLDRNQLTSLPREISGLTRLQELYLDHNRLVELPSELGAL 335

Query: 383 EPSLQALRLDGNP 395
              L+ L L+GNP
Sbjct: 336 T-QLRRLYLEGNP 347



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 129/277 (46%), Gaps = 35/277 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LDV  NKL  +    I   T LT L    N+L G+P TIG L+R+  L LH N++ S
Sbjct: 106 LEWLDVSENKLEEVCAE-IGQLTSLTRLDLHTNVLKGLPPTIGRLTRVKHLSLHFNQLES 164

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P  I  C SL    +  N L  LP E+G+L+ L  L LH N+L+               
Sbjct: 165 LPPDIGQCTSLVWLSLNANQLKQLPTEMGELTGLVRLSLHINELES-------------- 210

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
                   +PPE+G++T L  L L  N L  L   L   P        R  L EN+  E 
Sbjct: 211 --------VPPELGRLTGLEALSLHKNRLTRLPPEL---PLGLAGSCCRLSLYENQLGEV 259

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                ++  +        +EL L    L+++PSE+   GE+ +L L RN +  LP E+S 
Sbjct: 260 PPELGNMGLL--------QELWLYSNQLTSVPSELGRLGELRRLWLDRNQLTSLPREISG 311

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              LQ L L  N++ + P   L +L+ L  L L+ NP
Sbjct: 312 LTRLQELYLDHNRLVELPSE-LGALTQLRRLYLEGNP 347



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 161/368 (43%), Gaps = 44/368 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N L  L    I +   L  L    NLL  +P  +  +++L +L L  N ++ 
Sbjct: 37  LQKLWLSNNGLRKLPEE-IGNLPQLDSLWLGSNLLRSLPGGVTQMTQLKKLWLPANMLVR 95

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ +    SL    +  N L  + AE+G+L+ L  LDLH+N LK       +L R+  L
Sbjct: 96  LPAEVCAITSLEWLDVSENKLEEVCAEIGQLTSLTRLDLHTNVLKGLPPTIGRLTRVKHL 155

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N L  LPP+IG+ T+L  L L  N L+ L + +       L   +R  L  NE   
Sbjct: 156 SLHFNQLESLPPDIGQCTSLVWLSLNANQLKQLPTEMGE-----LTGLVRLSLHINELES 210

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE--IWEAGEITKLDLSRNSIQELPPE 237
                  L  +        + LSL    L+ +P E  +  AG   +L L  N + E+PPE
Sbjct: 211 VPPELGRLTGL--------EALSLHKNRLTRLPPELPLGLAGSCCRLSLYENQLGEVPPE 262

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           L +   LQ L L  N++   P   L  L  L  L LD N L  +P +             
Sbjct: 263 LGNMGLLQELWLYSNQLTSVPSE-LGRLGELRRLWLDRNQLTSLPRE------------- 308

Query: 298 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN-SLQSIPEGF 356
                        S L  LQELYL   +L E P+++  L QLR L L  N  LQS+P   
Sbjct: 309 ------------ISGLTRLQELYLDHNRLVELPSELGALTQLRRLYLEGNPELQSLPPPV 356

Query: 357 KNLTSLTE 364
           + L  L E
Sbjct: 357 EALPCLGE 364


>gi|421124179|ref|ZP_15584449.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421135047|ref|ZP_15595177.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410020930|gb|EKO87725.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410438666|gb|EKP87752.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 595

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 192/418 (45%), Gaps = 36/418 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ +
Sbjct: 165 LQKLWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLAT 223

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+ NN L+ LP E+G+L  L  L    N+L     E  QL+ L  L
Sbjct: 224 LPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTL 283

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E
Sbjct: 284 NLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAE 337

Query: 180 ASTTK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWE 217
               +       E L     RL   +               +EL L     S +P EI  
Sbjct: 338 DGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISR 397

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              +  L L  N ++++P E+    +L+ L L  N+++  P  I   L +L  L L  N 
Sbjct: 398 LKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEI-GQLRNLQRLSLHQNT 456

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
           L+  P++  + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L
Sbjct: 457 LKIFPAE-IEQLKKLQKLDLSVNQFTTFPKE--IGKLENLQTLNLQRNQLTNLPAEIEQL 513

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           + L+ LDL+ N    +P+    L  L  LDL +N ++ LP E+G L+ +LQ L L  N
Sbjct: 514 KNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ-NLQWLYLQNN 570



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 205/440 (46%), Gaps = 47/440 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L N  I     L +L   KN L   P+ IG L  L +L L +NR+ +
Sbjct: 119 LESLDLSENRLIILPNE-IGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTA 177

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    + NN  + LP E+G+L  L TL+L  NQL    VE  QL+ L  L
Sbjct: 178 LPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQEL 237

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL-----LTGNP-----LRTLRS-SLVNGPTPALLKYL 168
            L NN L+ LP EIG++  L+ L      LT  P     L+ L++ +LVN     L K +
Sbjct: 238 YLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 297

Query: 169 --------------------RSRLPE---NEDSEASTTKEDLI----TMATRLSVTSKEL 201
                               R R+ +   + + +     ED +     +A    +   +L
Sbjct: 298 GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDL 357

Query: 202 SLEGMNLSAI-PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
            L+  N S + P  I +   + +L L       LP E+S   +L+ L L  N +K  P  
Sbjct: 358 RLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSE 417

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I   L +L  L L+ N L ++P +    +  LQ L L  N +   P       L  LQ+L
Sbjct: 418 I-GQLRNLEALNLEANELERLPKE-IGQLRNLQRLSLHQNTLKIFP--AEIEQLKKLQKL 473

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            L   Q    P +I +L+ L+ L+L +N L ++P   + L +L ELDL+DN  + LP E+
Sbjct: 474 DLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEI 533

Query: 380 GLLEPSLQALRLDGNPLRSI 399
           G L+  LQ L L  N L ++
Sbjct: 534 GKLK-KLQTLDLRNNQLTTL 552



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 191/423 (45%), Gaps = 46/423 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G KLT L    I     L EL    NLL  +P+ IG L  L  LDL  N++ + P+
Sbjct: 53  LNLSGEKLTALPKE-IGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPA 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L    +  N L  LP E+G+L  L  L L+ N+L  +  E  QL+ L  L LS
Sbjct: 112 VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEAS 181
            N L+ LP EIG++  L+ L L  N    L         P  +  L++    N +D++ +
Sbjct: 172 ENRLTALPKEIGQLKNLQTLDLQNNQFTIL---------PKEIGQLQNLQTLNLQDNQLA 222

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
           T   ++  +        +EL L    L+ +P EI +   +  L    N +  LP E+   
Sbjct: 223 TLPVEIGQLQ-----NLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQL 277

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-------------------LRQVP 282
            +LQTL L  N++   P  I   L +L  L+L  NP                   LR+V 
Sbjct: 278 KNLQTLNLVNNRLTVLPKEI-GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 336

Query: 283 SDG-FKDIPM-----LQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDIL 334
            DG ++++ +     L++ DL     +  +  P       +L+ELYL        P +I 
Sbjct: 337 EDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEIS 396

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           RL+ L+ L L  N L+ IP     L +L  L+L  N +  LP E+G L  +LQ L L  N
Sbjct: 397 RLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLR-NLQRLSLHQN 455

Query: 395 PLR 397
            L+
Sbjct: 456 TLK 458



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 146/289 (50%), Gaps = 29/289 (10%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS   L+ LP EIG++  L++L L  N L TL         P  +  L     
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTL---------PKEIGQL----- 93

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSR 228
             E+ +    +++   +AT  +V  +   LE ++LS      +P+EI     +  L L +
Sbjct: 94  --ENLQELDLRDN--QLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYK 149

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +   P E+    +LQ L LS N++   P  I   L +L  L L NN    +P +    
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQNNQFTILPKE-IGQ 207

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  LQ L+L  N +A+LP       L +LQELYLR  +L   P +I +LQ L++L   +N
Sbjct: 208 LQNLQTLNLQDNQLATLP--VEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPEN 265

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L ++P+    L +L  L+L +N ++ LP E+G L+ +LQ L L  NPL
Sbjct: 266 RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQ-NLQDLELLMNPL 313



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 120/229 (52%), Gaps = 8/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+ E  T ++  +T A +  +  + L+L G  L+A+P EI +   + +L+L  N +  LP
Sbjct: 30  EEVEPGTYRD--LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L L  N++  +P A++  L  L  L L  N L  +P++    +  LQ L
Sbjct: 88  KEIGQLENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IGRLQNLQDL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L  N + + P+      L +LQ+L+L   +L   P +I +L+ L+ LDL  N    +P+
Sbjct: 146 GLYKNKLTTFPK--EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L  L+L DN ++ LP E+G L+ +LQ L L  N L  + + I
Sbjct: 204 EIGQLQNLQTLNLQDNQLATLPVEIGQLQ-NLQELYLRNNRLTVLPKEI 251



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 104/254 (40%), Gaps = 37/254 (14%)

Query: 18  LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           +I  +  L EL       + +P+ I  L  L  L L  N +  IPS I    +L    + 
Sbjct: 371 VILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLE 430

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
            N L  LP E+G+L  L  L LH N LK +  E  QL+ L  LDLS N  +  P EIGK+
Sbjct: 431 ANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKL 490

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L+ L L  N L  L         PA ++ L++                          
Sbjct: 491 ENLQTLNLQRNQLTNL---------PAEIEQLKN-------------------------- 515

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             +EL L     + +P EI +  ++  LDL  N +  LP E+    +LQ L L  N+   
Sbjct: 516 -LQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSF 574

Query: 257 WPDAILTSLSSLSC 270
                +  L  L C
Sbjct: 575 EEQERIRKLLPLKC 588



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 2/128 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N L +     I     L +L  S N     P+ IG L  L  L+L +N++ +
Sbjct: 447 LQRLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTN 505

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E  + +N  + LP E+GKL KL TLDL +NQL     E  QL+ L  L
Sbjct: 506 LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 565

Query: 120 DLSNNSLS 127
            L NN  S
Sbjct: 566 YLQNNQFS 573


>gi|417770843|ref|ZP_12418746.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680944|ref|ZP_13242181.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327382|gb|EJO79634.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409947186|gb|EKN97187.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665862|gb|EMF31349.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 590

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 192/418 (45%), Gaps = 36/418 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ +
Sbjct: 160 LQKLWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLAT 218

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+ NN L+ LP E+G+L  L  L    N+L     E  QL+ L  L
Sbjct: 219 LPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTL 278

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E
Sbjct: 279 NLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAE 332

Query: 180 ASTTK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWE 217
               +       E L     RL   +               +EL L     S +P EI  
Sbjct: 333 DGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISR 392

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              +  L L  N ++++P E+    +L+ L L  N+++  P  I   L +L  L L  N 
Sbjct: 393 LKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEI-GQLRNLQRLSLHQNT 451

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
           L+  P++  + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L
Sbjct: 452 LKIFPAE-IEQLKKLQKLDLSVNQFTTFPK--EIGKLENLQTLNLQRNQLTNLPAEIEQL 508

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           + L+ LDL+ N    +P+    L  L  LDL +N ++ LP E+G L+ +LQ L L  N
Sbjct: 509 KNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ-NLQWLYLQNN 565



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 205/440 (46%), Gaps = 47/440 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L N  I     L +L   KN L   P+ IG L  L +L L +NR+ +
Sbjct: 114 LESLDLSENRLIILPNE-IGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTA 172

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    + NN  + LP E+G+L  L TL+L  NQL    VE  QL+ L  L
Sbjct: 173 LPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQEL 232

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL-----LTGNP-----LRTLRS-SLVNGPTPALLKYL 168
            L NN L+ LP EIG++  L+ L      LT  P     L+ L++ +LVN     L K +
Sbjct: 233 YLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 292

Query: 169 --------------------RSRLPE---NEDSEASTTKEDLI----TMATRLSVTSKEL 201
                               R R+ +   + + +     ED +     +A    +   +L
Sbjct: 293 GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDL 352

Query: 202 SLEGMNLSAI-PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
            L+  N S + P  I +   + +L L       LP E+S   +L+ L L  N +K  P  
Sbjct: 353 RLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSE 412

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I   L +L  L L+ N L ++P +    +  LQ L L  N +   P       L  LQ+L
Sbjct: 413 I-GQLRNLEALNLEANELERLPKE-IGQLRNLQRLSLHQNTLKIFP--AEIEQLKKLQKL 468

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            L   Q    P +I +L+ L+ L+L +N L ++P   + L +L ELDL+DN  + LP E+
Sbjct: 469 DLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEI 528

Query: 380 GLLEPSLQALRLDGNPLRSI 399
           G L+  LQ L L  N L ++
Sbjct: 529 GKLK-KLQTLDLRNNQLTTL 547



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 191/423 (45%), Gaps = 46/423 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G KLT L    I     L EL    NLL  +P+ IG L  L  LDL  N++ + P+
Sbjct: 48  LNLSGEKLTALPKE-IGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPA 106

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L    +  N L  LP E+G+L  L  L L+ N+L  +  E  QL+ L  L LS
Sbjct: 107 VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLS 166

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEAS 181
            N L+ LP EIG++  L+ L L  N    L         P  +  L++    N +D++ +
Sbjct: 167 ENRLTALPKEIGQLKNLQTLDLQNNQFTIL---------PKEIGQLQNLQTLNLQDNQLA 217

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
           T   ++  +        +EL L    L+ +P EI +   +  L    N +  LP E+   
Sbjct: 218 TLPVEIGQLQ-----NLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQL 272

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-------------------LRQVP 282
            +LQTL L  N++   P  I   L +L  L+L  NP                   LR+V 
Sbjct: 273 KNLQTLNLVNNRLTVLPKEI-GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 331

Query: 283 SDG-FKDIPM-----LQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDIL 334
            DG ++++ +     L++ DL     +  +  P       +L+ELYL        P +I 
Sbjct: 332 EDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEIS 391

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           RL+ L+ L L  N L+ IP     L +L  L+L  N +  LP E+G L  +LQ L L  N
Sbjct: 392 RLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLR-NLQRLSLHQN 450

Query: 395 PLR 397
            L+
Sbjct: 451 TLK 453



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 146/289 (50%), Gaps = 29/289 (10%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS   L+ LP EIG++  L++L L  N L TL         P  +  L     
Sbjct: 43  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTL---------PKEIGQL----- 88

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSR 228
             E+ +    +++   +AT  +V  +   LE ++LS      +P+EI     +  L L +
Sbjct: 89  --ENLQELDLRDN--QLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYK 144

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +   P E+    +LQ L LS N++   P  I   L +L  L L NN    +P +    
Sbjct: 145 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQNNQFTILPKE-IGQ 202

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  LQ L+L  N +A+LP       L +LQELYLR  +L   P +I +LQ L++L   +N
Sbjct: 203 LQNLQTLNLQDNQLATLP--VEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPEN 260

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L ++P+    L +L  L+L +N ++ LP E+G L+ +LQ L L  NPL
Sbjct: 261 RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQ-NLQDLELLMNPL 308



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 120/229 (52%), Gaps = 8/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+ E  T ++  +T A +  +  + L+L G  L+A+P EI +   + +L+L  N +  LP
Sbjct: 25  EEVEPGTYRD--LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLP 82

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L L  N++  +P A++  L  L  L L  N L  +P++    +  LQ L
Sbjct: 83  KEIGQLENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IGRLQNLQDL 140

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L  N + + P+      L +LQ+L+L   +L   P +I +L+ L+ LDL  N    +P+
Sbjct: 141 GLYKNKLTTFPK--EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPK 198

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L  L+L DN ++ LP E+G L+ +LQ L L  N L  + + I
Sbjct: 199 EIGQLQNLQTLNLQDNQLATLPVEIGQLQ-NLQELYLRNNRLTVLPKEI 246



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 104/254 (40%), Gaps = 37/254 (14%)

Query: 18  LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           +I  +  L EL       + +P+ I  L  L  L L  N +  IPS I    +L    + 
Sbjct: 366 VILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLE 425

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
            N L  LP E+G+L  L  L LH N LK +  E  QL+ L  LDLS N  +  P EIGK+
Sbjct: 426 ANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKL 485

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L+ L L  N L  L         PA ++ L++                          
Sbjct: 486 ENLQTLNLQRNQLTNL---------PAEIEQLKN-------------------------- 510

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             +EL L     + +P EI +  ++  LDL  N +  LP E+    +LQ L L  N+   
Sbjct: 511 -LQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSF 569

Query: 257 WPDAILTSLSSLSC 270
                +  L  L C
Sbjct: 570 EEQERIRKLLPLKC 583



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 2/128 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N L +     I     L +L  S N     P+ IG L  L  L+L +N++ +
Sbjct: 442 LQRLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTN 500

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E  + +N  + LP E+GKL KL TLDL +NQL     E  QL+ L  L
Sbjct: 501 LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 560

Query: 120 DLSNNSLS 127
            L NN  S
Sbjct: 561 YLQNNQFS 568


>gi|327274772|ref|XP_003222150.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387-like [Anolis carolinensis]
          Length = 871

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 194/384 (50%), Gaps = 33/384 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ GNK+T++ N  +     L  L  ++N +   P+ +  L  + +L+L +N I S+P 
Sbjct: 275 LDLSGNKVTLIEN--LTEMKKLNILYLNENKMKIFPKALCYLPNISKLNLSENLIQSLPK 332

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDL 121
            I    +L E  + NN L  LP +L +L +L  + L  NQL+     VE  Q +L  L+L
Sbjct: 333 EIEELKTLKELSLSNNRLIFLPIQLFQLIQLEKMRLDCNQLESLSDKVENLQ-KLQDLNL 391

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
           S N    +   I K T L +L L+ N  + L ++L        LKYL+         E  
Sbjct: 392 SKNLFQNITDNISKCTMLERLNLSDNQFKKLPNNLYQ------LKYLK---------ELH 436

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSA---IPSEIWEAGEITKLDLSRNSIQELPPEL 238
             +  LI +   ++  +KELS+  ++ +A   IP EI    EI K+DLS N +   P  L
Sbjct: 437 LNRNQLILLDEHIAF-NKELSVLEVSENALMYIPVEIKNCTEIIKIDLSCNKLALFPMGL 495

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK--DIPMLQILD 296
            +  +L+ L LS N I +    I T +S +  L+  N    ++PS       +  L  LD
Sbjct: 496 CALVALRHLNLSGNYISE----ITTEISFIKYLQYLNLSKNKLPSFSIHLCTLSRLNYLD 551

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           LSYN I+S+P N     +  L+ L L   +    P ++  L QL++LDLS+N +Q IP  
Sbjct: 552 LSYNQISSIPTN--VQKMKSLRTLLLHHSKFILFPRELCALNQLKVLDLSENKIQFIPSD 609

Query: 356 FKNLTSLTELDLSDNNISALPPEL 379
            K+L  L EL+LS+NN ++ P E+
Sbjct: 610 IKDLEELKELNLSNNNFASFPVEI 633



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 188/400 (47%), Gaps = 54/400 (13%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           + L+   +L IP+ +     L   Y+ NN +  +P E+ +L+ L  L +  N+L     E
Sbjct: 160 IQLNAKGLLEIPTGVLDMKMLNYLYLNNNEIKIIPKEIRQLTGLEILSIERNRLTSLPPE 219

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
              L+ L  L+L +N L+GLP E  +++ L+ LL + N +            P+ L  LR
Sbjct: 220 IGLLQNLRTLNLRHNQLTGLPDEFSQLSELKYLLFSHNNIEKF---------PSALTTLR 270

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           S    +      T  E+L  M  +L++    L L    +   P  +     I+KL+LS N
Sbjct: 271 SLEVLDLSGNKVTLIENLTEMK-KLNI----LYLNENKMKIFPKALCYLPNISKLNLSEN 325

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            IQ LP E+    +L+ L LS N++   P   L  L  L  ++LD N L  + SD  +++
Sbjct: 326 LIQSLPKEIEELKTLKELSLSNNRLIFLPIQ-LFQLIQLEKMRLDCNQLESL-SDKVENL 383

Query: 290 PMLQILDLSYNIA----------------SLPENPPFSSLP-------HLQELYLRRMQL 326
             LQ L+LS N+                 +L +N  F  LP       +L+EL+L R QL
Sbjct: 384 QKLQDLNLSKNLFQNITDNISKCTMLERLNLSDN-QFKKLPNNLYQLKYLKELHLNRNQL 442

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
                 I   ++L +L++S+N+L  IP   KN T + ++DLS N ++  P  L  L  +L
Sbjct: 443 ILLDEHIAFNKELSVLEVSENALMYIPVEIKNCTEIIKIDLSCNKLALFPMGLCAL-VAL 501

Query: 387 QALRLDGNPLRSIRRTILDRGTKAVLKYL------KDKIP 420
           + L L GN +  I   I      + +KYL      K+K+P
Sbjct: 502 RHLNLSGNYISEITTEI------SFIKYLQYLNLSKNKLP 535



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 155/308 (50%), Gaps = 21/308 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+L +L  + IA    L+ L  S+N L  +P  I + + +I++DL  N++  
Sbjct: 432 LKELHLNRNQLILLDEH-IAFNKELSVLEVSENALMYIPVEIKNCTEIIKIDLSCNKLAL 490

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
            P  +    +L    +  N +S +  E+  +  L  L+L  N+L  + +  C L RL+ L
Sbjct: 491 FPMGLCALVALRHLNLSGNYISEITTEISFIKYLQYLNLSKNKLPSFSIHLCTLSRLNYL 550

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNP-------LRTLRSSLVNGPTPALLKYLRSRL 172
           DLS N +S +P  + KM +LR LLL  +        L  L    V   +   ++++ S +
Sbjct: 551 DLSYNQISSIPTNVQKMKSLRTLLLHHSKFILFPRELCALNQLKVLDLSENKIQFIPSDI 610

Query: 173 PENED-SEASTTKEDLITMATRLS--VTSKELSL---EGMNLSAIPSEIWEAGEITKLDL 226
            + E+  E + +  +  +    +   ++ ++L++    G+ L ++P EI +   + +LD+
Sbjct: 611 KDLEELKELNLSNNNFASFPVEICQILSLQKLTICQKNGLKLKSLPEEISKLLVLKELDI 670

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-- 284
           S N +QE+P  +    +L TLI + N  K  P +  +SL +L  L L  N ++++PSD  
Sbjct: 671 SYNELQEMPKSIGEIKTLVTLIANNNFFKKLPSS-FSSLRNLQHLNLKENEIQRLPSDMH 729

Query: 285 ---GFKDI 289
              G +DI
Sbjct: 730 LLVGLRDI 737



 Score = 41.6 bits (96), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 45/95 (47%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+   +L EL  S N L  MP++IG +  L+ L  + N    +PSS S   +L    +  
Sbjct: 659 ISKLLVLKELDISYNELQEMPKSIGEIKTLVTLIANNNFFKKLPSSFSSLRNLQHLNLKE 718

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 113
           N +  LP+++  L  L  ++   N L     E C+
Sbjct: 719 NEIQRLPSDMHLLVGLRDINFDGNPLIRPPTEVCK 753


>gi|260788680|ref|XP_002589377.1| hypothetical protein BRAFLDRAFT_218230 [Branchiostoma floridae]
 gi|229274554|gb|EEN45388.1| hypothetical protein BRAFLDRAFT_218230 [Branchiostoma floridae]
          Length = 470

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 199/443 (44%), Gaps = 41/443 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L V  NKLT +    I     L+ L A  N+L  +P+ IGSL ++  L ++ N++  
Sbjct: 38  LDYLAVSNNKLTSIPE-AIGRLQKLSRLDADGNMLTSLPQAIGSLQKMTDLYINDNQLTE 96

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  +    +L    +GNN LS  P  + KL KL  L ++ NQL E     C L  L VL
Sbjct: 97  VPPGVCSLPNLEVLGVGNNKLSTFPPGVEKLQKLRELYINDNQLTEVPPGVCSLPNLEVL 156

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            + NN LS  PP + K+  LR+L +  N L  + S + + P   +L    + L     S 
Sbjct: 157 GVGNNKLSTFPPGVEKLQKLRELYINDNQLTEVPSGVCSLPNLEVLSVFNNNL-----ST 211

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        +EL + G  L+ +PS +     +  L +  N++   P  + 
Sbjct: 212 FPLGVEKLQKV--------RELYIYGNQLTEVPSGVCSLPNLEVLSVFNNNLSTFPLGVE 263

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD--------------- 284
               ++ L +  N++ + P  +   L +L  L +  NP+R++P+D               
Sbjct: 264 KLQKVRKLYIYGNQLTEVPSGVCL-LPNLEVLSVGMNPIRRLPNDVTRLARLKTLSVPGC 322

Query: 285 GFKDIP--MLQILDLSYNIASLPENPPFSSLP-------HLQELYLRRMQLREAPTDILR 335
            F + P  +L +  L    A       F  +P       HL+ L L    LR  P+ +  
Sbjct: 323 QFDEFPRQVLHLKTLEELYAGQNGGRKFDMVPDEVGNLQHLRLLSLENNFLRTLPSTMSH 382

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L  LR++ L  N   + PE    L ++ +LD+ +NNI+ L   L   +  L+ L + GNP
Sbjct: 383 LHNLRVVQLPNNKFDTFPEVLCELPAMAKLDIRNNNITRLLTALHRAD-KLRDLDVSGNP 441

Query: 396 LRSIRRTILDRGTKAVLKYLKDK 418
           L    + +  +GT A++ +LK +
Sbjct: 442 LTYPPQDVCKQGTGAIMAFLKQE 464



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 28/203 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL + GN+LT + +  +     L  L    N +  +P  +  L+RL  L +   +   
Sbjct: 268 VRKLYIYGNQLTEVPSG-VCLLPNLEVLSVGMNPIRRLPNDVTRLARLKTLSVPGCQFDE 326

Query: 61  IPSSISGCCSLAEFYMG--------------------------NNALSALPAELGKLSKL 94
            P  +    +L E Y G                          NN L  LP+ +  L  L
Sbjct: 327 FPRQVLHLKTLEELYAGQNGGRKFDMVPDEVGNLQHLRLLSLENNFLRTLPSTMSHLHNL 386

Query: 95  GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             + L +N+   +    C+L  ++ LD+ NN+++ L   + +   LR L ++GNPL    
Sbjct: 387 RVVQLPNNKFDTFPEVLCELPAMAKLDIRNNNITRLLTALHRADKLRDLDVSGNPLTYPP 446

Query: 154 SSLVNGPTPALLKYLRSRLPENE 176
             +    T A++ +L+    + E
Sbjct: 447 QDVCKQGTGAIMAFLKQEARKGE 469


>gi|198415792|ref|XP_002126526.1| PREDICTED: similar to Leucine-rich repeat-containing protein 40
           [Ciona intestinalis]
          Length = 815

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 214/438 (48%), Gaps = 59/438 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD   N + V   ++ +    LT L  + N L  +P+ IGSL RL    L  N++ +
Sbjct: 254 LHHLDASSNNIKVFPQSVYSLGFSLTSLNLTNNSLESIPDGIGSLKRLRVFMLSFNKLQT 313

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ ++G  SL + ++ NN L+ L   +G L  L TLD  +N++     E   LR L +L
Sbjct: 314 LPNDMNGLVSLQQLHVSNNNLTNLSPLIG-LLHLETLDASNNKITSLPTEMHTLRWLFIL 372

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L+NN L+ LPP IG +  L++L L  N L +L S+L  G    L      ++ +  D+E
Sbjct: 373 NLANNQLTSLPPSIGHIKALKQLYLRNNRLESLPSTL--GEQQLL------QVVDASDNE 424

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI-------- 231
            +   +DL     R   T ++L L    LS IP  I   G + K D+S N+         
Sbjct: 425 LTNLPDDL-----RKWRTLEQLILARNQLSQIPKSIKYLGMLDKFDVSDNNFVTSPLPDA 479

Query: 232 --------------QELPP---------------ELSSCASLQTLILSRNKIKDWPDAIL 262
                           LPP               EL+   +  +L LSR +++++P +I 
Sbjct: 480 ASKVLRELRLAGNPWRLPPLGGDDNRSLITRIYKELNGIVT--SLDLSRVELEEFPLSI- 536

Query: 263 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 321
            +  +L  LKL  N ++ +P +    + +L+ILD+S N +A +PE      L HLQEL++
Sbjct: 537 CNCRNLRELKLAGNSIKSIPGN-IGRLRLLEILDVSNNQVARIPEQ--IGILTHLQELHV 593

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGL 381
               L     ++ +L+ L+IL+ + N L  +PE F  L  LT +DLSDN +  LP +   
Sbjct: 594 SNNCLENFAQNLTKLRSLQILNFAGNQLTQLPENFGELNKLTSMDLSDNQLLELPNDRID 653

Query: 382 LEPSLQALRLDGNPLRSI 399
           +  SL  L +  N +++I
Sbjct: 654 VLASLMTLNISYNRVKNI 671



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 191/381 (50%), Gaps = 41/381 (10%)

Query: 24  MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           M + L A  N +  +P +I +L  L  +D+  N I ++P+S++    L+   + +N L A
Sbjct: 69  MTSVLHAQNNKIKKIPRSISALQSLYEVDMRNNVIGALPASVAKLKKLSSLNVSDNRLKA 128

Query: 84  LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           LP  + K S L T D+ +N++K+      Q  ++ LD+S NS+  LP  I ++   R L 
Sbjct: 129 LPKTIHKASGLETCDVSNNKIKKLPKNIGQSNMTSLDVSQNSIKILPKSIYRLP--RSLD 186

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           ++GN +  L         P +                      +IT  ++ +++  +++L
Sbjct: 187 VSGNQIEVL---------PPI----------------------VITKKSKGNIS--QINL 213

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
               LS +P +I +   +T +++S N +Q LP  + S   L  L  S N IK +P ++ +
Sbjct: 214 SDNKLSKLPEDIDKLQRLTHINVSGNHLQSLPTAIGSLKYLHHLDASSNNIKVFPQSVYS 273

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
              SL+ L L NN L  +P DG   +  L++  LS+N + +LP +   + L  LQ+L++ 
Sbjct: 274 LGFSLTSLNLTNNSLESIP-DGIGSLKRLRVFMLSFNKLQTLPND--MNGLVSLQQLHVS 330

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
              L    + ++ L  L  LD S N + S+P     L  L  L+L++N +++LPP +G +
Sbjct: 331 NNNLTNL-SPLIGLLHLETLDASNNKITSLPTEMHTLRWLFILNLANNQLTSLPPSIGHI 389

Query: 383 EPSLQALRLDGNPLRSIRRTI 403
           + +L+ L L  N L S+  T+
Sbjct: 390 K-ALKQLYLRNNRLESLPSTL 409



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 206/428 (48%), Gaps = 44/428 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L V  N LT LS   +     L  L AS N +  +P  + +L  L  L+L  N++ S
Sbjct: 324 LQQLHVSNNNLTNLSP--LIGLLHLETLDASNNKITSLPTEMHTLRWLFILNLANNQLTS 381

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI    +L + Y+ NN L +LP+ LG+   L  +D   N+L     +  + R L  L
Sbjct: 382 LPPSIGHIKALKQLYLRNNRLESLPSTLGEQQLLQVVDASDNELTNLPDDLRKWRTLEQL 441

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP-ALLKYLRS-------- 170
            L+ N LS +P  I  +  L K  ++ N       + V  P P A  K LR         
Sbjct: 442 ILARNQLSQIPKSIKYLGMLDKFDVSDN-------NFVTSPLPDAASKVLRELRLAGNPW 494

Query: 171 RLP--ENEDSEASTTK--EDLITMATRLSVTS----------------KELSLEGMNLSA 210
           RLP    +D+ +  T+  ++L  + T L ++                 +EL L G ++ +
Sbjct: 495 RLPPLGGDDNRSLITRIYKELNGIVTSLDLSRVELEEFPLSICNCRNLRELKLAGNSIKS 554

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           IP  I     +  LD+S N +  +P ++     LQ L +S N ++++    LT L SL  
Sbjct: 555 IPGNIGRLRLLEILDVSNNQVARIPEQIGILTHLQELHVSNNCLENFAQN-LTKLRSLQI 613

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 329
           L    N L Q+P + F ++  L  +DLS N +  LP N     L  L  L +   +++  
Sbjct: 614 LNFAGNQLTQLP-ENFGELNKLTSMDLSDNQLLELP-NDRIDVLASLMTLNISYNRVKNI 671

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
           PTD+  L +++I++LS+N L+ +P     + SLT LDL+DN I ++P  +  L P+L+ L
Sbjct: 672 PTDLPYLYRMQIINLSRNDLKLLPIDIWRMKSLTSLDLTDNLIESIPESIAKL-PALKEL 730

Query: 390 RLDGNPLR 397
            L  N ++
Sbjct: 731 NLTDNKIK 738



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 111/244 (45%), Gaps = 40/244 (16%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL  + N +  +P  IG L  L  LD+  N++  IP  I     L E ++ NN L   
Sbjct: 542 LRELKLAGNSIKSIPGNIGRLRLLEILDVSNNQVARIPEQIGILTHLQELHVSNNCLENF 601

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE-IGKMTTLRKL 142
              L KL  L  L+   NQL +      +L +L+ +DLS+N L  LP + I  + +L  L
Sbjct: 602 AQNLTKLRSLQILNFAGNQLTQLPENFGELNKLTSMDLSDNQLLELPNDRIDVLASLMTL 661

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 202
            ++ N ++ +         P  L YL                        R+ +    ++
Sbjct: 662 NISYNRVKNI---------PTDLPYL-----------------------YRMQI----IN 685

Query: 203 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD--A 260
           L   +L  +P +IW    +T LDL+ N I+ +P  ++   +L+ L L+ NKIK WP   A
Sbjct: 686 LSRNDLKLLPIDIWRMKSLTSLDLTDNLIESIPESIAKLPALKELNLTDNKIKVWPKCMA 745

Query: 261 ILTS 264
           +LTS
Sbjct: 746 VLTS 749



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 139/307 (45%), Gaps = 22/307 (7%)

Query: 107 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           Y  E   +  SVL   NN +  +P  I  + +L ++ +  N +  L +S+      + L 
Sbjct: 61  YANEEVAMMTSVLHAQNNKIKKIPRSISALQSLYEVDMRNNVIGALPASVAKLKKLSSLN 120

Query: 167 YLRSR---LPEN-------EDSEASTTK-EDLITMATRLSVTSKELSLEGMNLSAIPSEI 215
              +R   LP+        E  + S  K + L     + ++TS ++S   + +  +P  I
Sbjct: 121 VSDNRLKALPKTIHKASGLETCDVSNNKIKKLPKNIGQSNMTSLDVSQNSIKI--LPKSI 178

Query: 216 WEAGEITKLDLSRNSIQELPPEL---SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
           +       LD+S N I+ LPP +    S  ++  + LS NK+   P+ I   L  L+ + 
Sbjct: 179 YRLPR--SLDVSGNQIEVLPPIVITKKSKGNISQINLSDNKLSKLPEDI-DKLQRLTHIN 235

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
           +  N L+ +P+     +  L  LD S N   +     +S    L  L L    L   P  
Sbjct: 236 VSGNHLQSLPT-AIGSLKYLHHLDASSNNIKVFPQSVYSLGFSLTSLNLTNNSLESIPDG 294

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
           I  L++LR+  LS N LQ++P     L SL +L +S+NN++ L P +GLL   L+ L   
Sbjct: 295 IGSLKRLRVFMLSFNKLQTLPNDMNGLVSLQQLHVSNNNLTNLSPLIGLLH--LETLDAS 352

Query: 393 GNPLRSI 399
            N + S+
Sbjct: 353 NNKITSL 359


>gi|124006156|ref|ZP_01690992.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988333|gb|EAY27986.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 755

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 201/411 (48%), Gaps = 25/411 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LDV  N L  L N++ A   +LT L    N +  +P  IG L+ L   ++  N++ S
Sbjct: 312 LKTLDVSNNLLNRLPNSMTAC-KLLTVLHIKNNQIKTLPADIGKLAHLTSFNVEHNQLGS 370

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK---EYCVEACQLRLS 117
           +P SI+   +L   ++ NN L++LP +LG+LS L  L +++NQL    E  V    LR  
Sbjct: 371 LPESIAEISTLGNLFLNNNYLTSLPKQLGQLSCLTMLYVNNNQLTQLPESMVRLVNLR-- 428

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPE 174
            L L  N L  LP  IG+   L  + L  N    +  +L + P    +    +R   +P 
Sbjct: 429 YLLLKRNKLRMLPKNIGQWRNLEVINLNHNQFDHIPETLFDLPKLQGVNIRNNRVAFIPS 488

Query: 175 NEDSEAS----TTKEDLITM----ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
           N     +       E+ I +      +L      L L    L+ +P EI     +  LDL
Sbjct: 489 NVGKATNLRNLNVSENCIRVLPASIGKLGTHLASLHLAKNQLTQVPEEIGNLLHLVTLDL 548

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S N + ELP  ++   +LQ L L+ N++K  P A L+ L +L  LK+D+N L+++ S G 
Sbjct: 549 SHNQLTELPTSITQLENLQELYLNNNQLKALP-AALSRLKNLRVLKVDHNQLKEL-SKGL 606

Query: 287 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
             +P L+IL  ++N + +LP N  F+    L +L L   QL   P+D+  L  L +LDL 
Sbjct: 607 DQLPFLKILTAAHNQLETLPVN--FTRSSQLHQLVLSHNQLNVLPSDMGDLNNLVLLDLQ 664

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            N L  +PE  K    L +L L+DN + ++  E G  E  LQ L L  N +
Sbjct: 665 GNVLTDLPESLKQCRKLKKLLLNDNQLKSIKVE-GWQE--LQYLALKNNQI 712



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 189/381 (49%), Gaps = 25/381 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L+V G  LT L N ++     L +L  + N +  +P+++G L++L  LD+  N +  
Sbjct: 266 IKYLEVSGALLTTLPN-ILGQCFSLDQLNVANNEIRALPDSLGQLTQLKTLDVSNNLLNR 324

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+S++ C  L   ++ NN +  LPA++GKL+ L + ++  NQL        ++  L  L
Sbjct: 325 LPNSMTACKLLTVLHIKNNQIKTLPADIGKLAHLTSFNVEHNQLGSLPESIAEISTLGNL 384

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPENE 176
            L+NN L+ LP ++G+++ L  L +  N L  L  S+V       L   R++   LP+N 
Sbjct: 385 FLNNNYLTSLPKQLGQLSCLTMLYVNNNQLTQLPESMVRLVNLRYLLLKRNKLRMLPKN- 443

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
                      I     L V    ++L       IP  +++  ++  +++  N +  +P 
Sbjct: 444 -----------IGQWRNLEV----INLNHNQFDHIPETLFDLPKLQGVNIRNNRVAFIPS 488

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
            +    +L+ L +S N I+  P +I    + L+ L L  N L QVP +   ++  L  LD
Sbjct: 489 NVGKATNLRNLNVSENCIRVLPASIGKLGTHLASLHLAKNQLTQVPEE-IGNLLHLVTLD 547

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           LS+N +  LP +   + L +LQELYL   QL+  P  + RL+ LR+L +  N L+ + +G
Sbjct: 548 LSHNQLTELPTS--ITQLENLQELYLNNNQLKALPAALSRLKNLRVLKVDHNQLKELSKG 605

Query: 356 FKNLTSLTELDLSDNNISALP 376
              L  L  L  + N +  LP
Sbjct: 606 LDQLPFLKILTAAHNQLETLP 626



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 192/410 (46%), Gaps = 55/410 (13%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           ++  P+ I  ++ L +L ++   + +I  +IS   +L E  + +  L+ LP  LGKL  +
Sbjct: 207 IDEFPKVISRITSLKKLQVYHCALPNIDENISNLVNLEELRIASARLTQLPVSLGKLPAI 266

Query: 95  GTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
             L++    L      +  C   L  L+++NN +  LP  +G++T L+ L ++ N L  L
Sbjct: 267 KYLEVSGALLTTLPNILGQC-FSLDQLNVANNEIRALPDSLGQLTQLKTLDVSNNLLNRL 325

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA--TRLSVTSKELS-------- 202
            +S+       LL  L  +     +++  T   D+  +A  T  +V   +L         
Sbjct: 326 PNSMT---ACKLLTVLHIK-----NNQIKTLPADIGKLAHLTSFNVEHNQLGSLPESIAE 377

Query: 203 --------LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
                   L    L+++P ++ +   +T L ++ N + +LP  +    +L+ L+L RNK+
Sbjct: 378 ISTLGNLFLNNNYLTSLPKQLGQLSCLTMLYVNNNQLTQLPESMVRLVNLRYLLLKRNKL 437

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS- 312
           +  P  I     +L  + L++N    +P   F D+P LQ +++  N +A +P N   ++ 
Sbjct: 438 RMLPKNI-GQWRNLEVINLNHNQFDHIPETLF-DLPKLQGVNIRNNRVAFIPSNVGKATN 495

Query: 313 -------------LP--------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
                        LP        HL  L+L + QL + P +I  L  L  LDLS N L  
Sbjct: 496 LRNLNVSENCIRVLPASIGKLGTHLASLHLAKNQLTQVPEEIGNLLHLVTLDLSHNQLTE 555

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
           +P     L +L EL L++N + ALP  L  L+ +L+ L++D N L+ + +
Sbjct: 556 LPTSITQLENLQELYLNNNQLKALPAALSRLK-NLRVLKVDHNQLKELSK 604



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 122/255 (47%), Gaps = 16/255 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L+V  N + VL  ++    T L  L  +KN L  +PE IG+L  L+ LDL  N++  
Sbjct: 496 LRNLNVSENCIRVLPASIGKLGTHLASLHLAKNQLTQVPEEIGNLLHLVTLDLSHNQLTE 555

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+SI+   +L E Y+ NN L ALPA L +L  L  L +  NQLKE      QL  L +L
Sbjct: 556 LPTSITQLENLQELYLNNNQLKALPAALSRLKNLRVLKVDHNQLKELSKGLDQLPFLKIL 615

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
             ++N L  LP    + + L +L+L+ N L  L         P+ +  L + +  +    
Sbjct: 616 TAAHNQLETLPVNFTRSSQLHQLVLSHNQLNVL---------PSDMGDLNNLVLLDLQGN 666

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             T   + +    +L    K+L L    L +I  E W+  E+  L L  N I  LP  L 
Sbjct: 667 VLTDLPESLKQCRKL----KKLLLNDNQLKSIKVEGWQ--ELQYLALKNNQIAVLPENLH 720

Query: 240 SCASLQTLILSRNKI 254
               L+TL L+ N I
Sbjct: 721 QLIGLRTLYLNNNPI 735



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 16/295 (5%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L  L L+N S+   P  I ++T+L+KL +    L  +  ++ N      L+   +RL + 
Sbjct: 197 LETLYLNNCSIDEFPKVISRITSLKKLQVYHCALPNIDENISNLVNLEELRIASARLTQL 256

Query: 176 EDSEASTTKEDLITMATRL-----SVTSKELSLEGMNLS-----AIPSEIWEAGEITKLD 225
             S         + ++  L     ++  +  SL+ +N++     A+P  + +  ++  LD
Sbjct: 257 PVSLGKLPAIKYLEVSGALLTTLPNILGQCFSLDQLNVANNEIRALPDSLGQLTQLKTLD 316

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           +S N +  LP  +++C  L  L +  N+IK  P A +  L+ L+   +++N L  +P + 
Sbjct: 317 VSNNLLNRLPNSMTACKLLTVLHIKNNQIKTLP-ADIGKLAHLTSFNVEHNQLGSLP-ES 374

Query: 286 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
             +I  L  L L+ N + SLP+      L  L  LY+   QL + P  ++RL  LR L L
Sbjct: 375 IAEISTLGNLFLNNNYLTSLPKQ--LGQLSCLTMLYVNNNQLTQLPESMVRLVNLRYLLL 432

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            +N L+ +P+      +L  ++L+ N    +P  L  L P LQ + +  N +  I
Sbjct: 433 KRNKLRMLPKNIGQWRNLEVINLNHNQFDHIPETLFDL-PKLQGVNIRNNRVAFI 486



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 121/284 (42%), Gaps = 54/284 (19%)

Query: 162 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 221
           P+    +  RL             D +T+ T L    KEL++       +P ++ +   +
Sbjct: 142 PSFQNCVYLRLYNQYHHSVYAHSLDGLTVFTNL----KELTINKSVKLYLPDQLDQLKYL 197

Query: 222 TKLDLSRNSIQELPPELS-----------SCA------------SLQTLILSRNKIKDWP 258
             L L+  SI E P  +S            CA            +L+ L ++  ++   P
Sbjct: 198 ETLYLNNCSIDEFPKVISRITSLKKLQVYHCALPNIDENISNLVNLEELRIASARLTQLP 257

Query: 259 ---------------DAILTSLSSL--SCLKLD-----NNPLRQVPSDGFKDIPMLQILD 296
                           A+LT+L ++   C  LD     NN +R +P D    +  L+ LD
Sbjct: 258 VSLGKLPAIKYLEVSGALLTTLPNILGQCFSLDQLNVANNEIRALP-DSLGQLTQLKTLD 316

Query: 297 LSYNIAS-LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           +S N+ + LP +     L  L  L+++  Q++  P DI +L  L   ++  N L S+PE 
Sbjct: 317 VSNNLLNRLPNSMTACKL--LTVLHIKNNQIKTLPADIGKLAHLTSFNVEHNQLGSLPES 374

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
              +++L  L L++N +++LP +LG L   L  L ++ N L  +
Sbjct: 375 IAEISTLGNLFLNNNYLTSLPKQLGQLS-CLTMLYVNNNQLTQL 417


>gi|260789701|ref|XP_002589884.1| hypothetical protein BRAFLDRAFT_235861 [Branchiostoma floridae]
 gi|229275068|gb|EEN45895.1| hypothetical protein BRAFLDRAFT_235861 [Branchiostoma floridae]
          Length = 341

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 184/402 (45%), Gaps = 74/402 (18%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T L  L  SKN L  + E+IG L +L RLD   N++ S+P  I+   +L E Y+  N L+
Sbjct: 3   TDLEYLDLSKNKLTTIHESIGRLQKLYRLDADDNKLTSLPQKIASLQNLEELYLQTNTLT 62

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 141
            LP+E+G+L KLG L ++ NQL       C LR L +L  SNN LS LP    ++  L K
Sbjct: 63  ELPSEVGELKKLGWLYINDNQLVTLPASICSLRNLKMLVASNNELSELPAGFEQLQNLTK 122

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 201
           L + GN L  L S + +      L++L + +  N                          
Sbjct: 123 LYVGGNKLTELSSGVCS------LQHLETVVVSNN------------------------- 151

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
                 LS +P  +     +T+L +  N  +ELP  + S ++L+ L++  N I+  PD I
Sbjct: 152 -----KLSTLPEGVERLKNLTELYIDGNQFRELPLGVCSLSNLEVLVVGPNPIRFLPDEI 206

Query: 262 -----LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 316
                L SL+ +SC               F++ P                  P   L  L
Sbjct: 207 KNLIRLKSLTIISC--------------QFEEFPR-----------------PIGDLEQL 235

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           + L L   +L   P  + +L++LR + L +N  ++ PE   +L  L  +D+ +N IS +P
Sbjct: 236 RYLALSNNKLSALPPTMDKLKRLRDVYLYENKFKTFPEVLCSLPKLMVVDIRNNRISKIP 295

Query: 377 PELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
             L  L   L+ L + GNPL+     + ++G+  +L +LKD+
Sbjct: 296 SSLSHLS-RLKRLVVAGNPLKYPPADVCEKGSDDILAFLKDE 336



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 135/293 (46%), Gaps = 34/293 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD + NKLT L    IAS   L EL    N L  +P  +G L +L  L ++ N++++
Sbjct: 28  LYRLDADDNKLTSLPQK-IASLQNLEELYLQTNTLTELPSEVGELKKLGWLYINDNQLVT 86

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+SI    +L      NN LS LPA   +L  L  L +  N+L E     C L+ L  +
Sbjct: 87  LPASICSLRNLKMLVASNNELSELPAGFEQLQNLTKLYVGGNKLTELSSGVCSLQHLETV 146

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---------RSSLVNGPTPALLKYLRS 170
            +SNN LS LP  + ++  L +L + GN  R L            LV GP P  +++L  
Sbjct: 147 VVSNNKLSTLPEGVERLKNLTELYIDGNQFRELPLGVCSLSNLEVLVVGPNP--IRFL-- 202

Query: 171 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
                          D I    RL    K L++        P  I +  ++  L LS N 
Sbjct: 203 --------------PDEIKNLIRL----KSLTIISCQFEEFPRPIGDLEQLRYLALSNNK 244

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           +  LPP +     L+ + L  NK K +P+ +L SL  L  + + NN + ++PS
Sbjct: 245 LSALPPTMDKLKRLRDVYLYENKFKTFPE-VLCSLPKLMVVDIRNNRISKIPS 296



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 2/170 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L ++GN+   L    + S + L  L+   N +  +P+ I +L RL  L +   +   
Sbjct: 166 LTELYIDGNQFRELPLG-VCSLSNLEVLVVGPNPIRFLPDEIKNLIRLKSLTIISCQFEE 224

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
            P  I     L    + NN LSALP  + KL +L  + L+ N+ K +    C L +L V+
Sbjct: 225 FPRPIGDLEQLRYLALSNNKLSALPPTMDKLKRLRDVYLYENKFKTFPEVLCSLPKLMVV 284

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
           D+ NN +S +P  +  ++ L++L++ GNPL+   + +    +  +L +L+
Sbjct: 285 DIRNNRISKIPSSLSHLSRLKRLVVAGNPLKYPPADVCEKGSDDILAFLK 334


>gi|440296439|gb|ELP89266.1| oligodendrocyte-myelin glycoprotein precursor, putative [Entamoeba
           invadens IP1]
          Length = 508

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 199/421 (47%), Gaps = 32/421 (7%)

Query: 19  IASWTMLTELIASKN--LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 76
           I+  T L EL  +KN    +G+   I   S L RLD+  N++ +IP  I    SL    +
Sbjct: 80  ISVATNLRELYLAKNNLFYDGISAEIKKCSNLQRLDISNNKLEAIPMEIGSLLSLEYLNI 139

Query: 77  GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 135
             NAL  +P E+G L KL TL ++ N +++   E   LR L  LD+S+N +  LP E+  
Sbjct: 140 SENALQTIPPEIGMLDKLQTLLMNKNSIQKLPAEIGNLRGLYELDMSSNQMDMLPEELSN 199

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           M +L+ L +  N L      L +       K+L     +N          D +   TRL 
Sbjct: 200 MLSLKILRIGYNKLSGNIDVLTH------FKFLVELDCQNNPGILDLPPLDSLQNLTRLV 253

Query: 196 V-----------TSKELSLE-----GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           V           TS ++  E      + +  IP EI+E   + +LD    +I  +P ++ 
Sbjct: 254 VRNLPITHIPGLTSLKMLCELNVRDNLKMQGIPEEIFEITTLQRLDFVGCNITVIPEDIQ 313

Query: 240 SCASLQTLILSRNKIKD--WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
              +L  L LSRN + +  +P A+ ++L+S+S L L  N L   P     D+  +  LD+
Sbjct: 314 KLTALNMLELSRNALTEASFPPAV-STLTSISKLSLSGNKLHTYPQT-LCDLTSVVDLDI 371

Query: 298 SYNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
           S N+    P+   F  L ++Q L     ++   P  + +L  +  +DL  N L+ +P   
Sbjct: 372 SNNLLVDFPD--AFGQLSNIQILCAAGNKINRIPEVMDKLISVTYMDLKNNQLKRLPATI 429

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
             +  L  L+L+ N +  LPPE+G LE  +Q L L  NPL    + I+ +G  A+ +YLK
Sbjct: 430 GEMRQLNRLELAHNMLPVLPPEMGQLEGIIQVLDLSNNPLVIPPKDIVVKGPAAICRYLK 489

Query: 417 D 417
           +
Sbjct: 490 E 490



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 189/407 (46%), Gaps = 30/407 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M  +++ G  ++     +       + L  S N    +P  +  +  L  L L +NRI S
Sbjct: 18  MDTIEITGKNMSTFPKGI--EKCQCSNLNCSVNDFTEIPPEVFQMVNLEILTLSENRITS 75

Query: 61  IPSSISGCCSLAEFYMGNNAL--SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLS 117
           +P SIS   +L E Y+  N L    + AE+ K S L  LD+ +N+L+   +E    L L 
Sbjct: 76  VPDSISVATNLRELYLAKNNLFYDGISAEIKKCSNLQRLDISNNKLEAIPMEIGSLLSLE 135

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            L++S N+L  +PPEIG +  L+ LL+  N ++ L         PA +  LR       +
Sbjct: 136 YLNISENALQTIPPEIGMLDKLQTLLMNKNSIQKL---------PAEIGNLRGLY----E 182

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPP 236
            + S+ + D++       ++ K L +    LS     +     + +LD   N  I +LPP
Sbjct: 183 LDMSSNQMDMLPEELSNMLSLKILRIGYNKLSGNIDVLTHFKFLVELDCQNNPGILDLPP 242

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL-DNNPLRQVPSDGFKDIPMLQIL 295
            L S  +L  L++    I   P   LTSL  L  L + DN  ++ +P + F +I  LQ L
Sbjct: 243 -LDSLQNLTRLVVRNLPITHIPG--LTSLKMLCELNVRDNLKMQGIPEEIF-EITTLQRL 298

Query: 296 DL-SYNIASLPENPPFSSLPHLQELYLRRMQLREA--PTDILRLQQLRILDLSQNSLQSI 352
           D    NI  +PE+     L  L  L L R  L EA  P  +  L  +  L LS N L + 
Sbjct: 299 DFVGCNITVIPED--IQKLTALNMLELSRNALTEASFPPAVSTLTSISKLSLSGNKLHTY 356

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           P+   +LTS+ +LD+S+N +   P   G L  ++Q L   GN +  I
Sbjct: 357 PQTLCDLTSVVDLDISNNLLVDFPDAFGQLS-NIQILCAAGNKINRI 402


>gi|260788696|ref|XP_002589385.1| hypothetical protein BRAFLDRAFT_77827 [Branchiostoma floridae]
 gi|229274562|gb|EEN45396.1| hypothetical protein BRAFLDRAFT_77827 [Branchiostoma floridae]
          Length = 843

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 188/420 (44%), Gaps = 50/420 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  NKLT +    I     L  L A  N+L  +P+ IGSL +L  L ++ N++  +PS
Sbjct: 41  LDVSRNKLTSIPE-AIGRLQKLYRLDAYSNMLTSLPQAIGSLQKLTHLYIYDNQLTEVPS 99

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            +    +L    +G   LS  P    KL KL  LD+  NQL E     C L  L VLD++
Sbjct: 100 GVCSLPNLEVLSVGKTKLSTFPPGAEKLQKLRELDIGDNQLTEVPSGVCSLPNLEVLDVN 159

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN LS  PP + K+  LR L +  N L  + S + +             LP  E     T
Sbjct: 160 NNKLSTFPPGVEKLQKLRVLDIGDNQLTEVPSGVCS-------------LPNLEALNVYT 206

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
            K                       LS  P  + +  ++  L ++ N + ELP  +   +
Sbjct: 207 NK-----------------------LSTFPPGVEKLQKLRLLGIADNKLTELPQGVCLLS 243

Query: 243 SLQTLILSRNKIKDWPDAI--LTSLSSLS--CLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +L+ LI +RN I   PD +  L  L +L   C + D  P RQV     K +  L      
Sbjct: 244 NLEILIANRNPIAHLPDDVTRLKRLKTLDVPCCQFDEFP-RQVLQ--LKTLEKLYAGGCK 300

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           ++I  +P+      L HL  L L    LR  P+ +  L  LR + L  N   + PE    
Sbjct: 301 FDI--VPDE--VGDLQHLWFLSLPNNLLRTLPSTLNHLHNLRQVHLWNNKFDTFPEVLCE 356

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           L ++ +LD+ +NNI+ LP  L   +  L+ L + GNPL    R +  +GT A++ +LK +
Sbjct: 357 LPAMEKLDIRNNNITRLPIALHRAD-KLKDLDVSGNPLTYPPRDVCKQGTGAIMAFLKQE 415



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 101/218 (46%), Gaps = 32/218 (14%)

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           EL L    L++IP E+++  ++  LD+SRN +  +P  +     L  L    N +   P 
Sbjct: 17  ELDLSNQGLTSIPEEVFDITDLEVLDVSRNKLTSIPEAIGRLQKLYRLDAYSNMLTSLPQ 76

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP---------- 309
           AI  SL  L+ L + +N L +VPS G   +P L++L  S     L   PP          
Sbjct: 77  AI-GSLQKLTHLYIYDNQLTEVPS-GVCSLPNLEVL--SVGKTKLSTFPPGAEKLQKLRE 132

Query: 310 --------------FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
                           SLP+L+ L +   +L   P  + +LQ+LR+LD+  N L  +P G
Sbjct: 133 LDIGDNQLTEVPSGVCSLPNLEVLDVNNNKLSTFPPGVEKLQKLRVLDIGDNQLTEVPSG 192

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
             +L +L  L++  N +S  PP +      LQ LRL G
Sbjct: 193 VCSLPNLEALNVYTNKLSTFPPGV----EKLQKLRLLG 226



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 137/323 (42%), Gaps = 66/323 (20%)

Query: 62  PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 120
           P +++G     E  + N  L+++P E+  ++ L  LD+  N+L        +L +L  LD
Sbjct: 9   PQTVNG---RLELDLSNQGLTSIPEEVFDITDLEVLDVSRNKLTSIPEAIGRLQKLYRLD 65

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
             +N L+ LP  IG +  L  L +  N L  + S + + P                    
Sbjct: 66  AYSNMLTSLPQAIGSLQKLTHLYIYDNQLTEVPSGVCSLPN------------------- 106

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                        L V    LS+    LS  P    +  ++ +LD+  N + E+P  + S
Sbjct: 107 -------------LEV----LSVGKTKLSTFPPGAEKLQKLRELDIGDNQLTEVPSGVCS 149

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             +L+ L ++ NK+  +P  +   L  L  L + +N L +VPS                 
Sbjct: 150 LPNLEVLDVNNNKLSTFPPGV-EKLQKLRVLDIGDNQLTEVPSG---------------- 192

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
                      SLP+L+ L +   +L   P  + +LQ+LR+L ++ N L  +P+G   L+
Sbjct: 193 ---------VCSLPNLEALNVYTNKLSTFPPGVEKLQKLRLLGIADNKLTELPQGVCLLS 243

Query: 361 SLTELDLSDNNISALPPELGLLE 383
           +L  L  + N I+ LP ++  L+
Sbjct: 244 NLEILIANRNPIAHLPDDVTRLK 266



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 25/197 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L +  NKLT L    +   + L  LIA++N +  +P+ +  L RL  LD+   +    P 
Sbjct: 225 LGIADNKLTELPQG-VCLLSNLEILIANRNPIAHLPDDVTRLKRLKTLDVPCCQFDEFPR 283

Query: 64  SISGCCSLAEFYMG-----------------------NNALSALPAELGKLSKLGTLDLH 100
            +    +L + Y G                       NN L  LP+ L  L  L  + L 
Sbjct: 284 QVLQLKTLEKLYAGGCKFDIVPDEVGDLQHLWFLSLPNNLLRTLPSTLNHLHNLRQVHLW 343

Query: 101 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 159
           +N+   +    C+L  +  LD+ NN+++ LP  + +   L+ L ++GNPL      +   
Sbjct: 344 NNKFDTFPEVLCELPAMEKLDIRNNNITRLPIALHRADKLKDLDVSGNPLTYPPRDVCKQ 403

Query: 160 PTPALLKYLRSRLPENE 176
            T A++ +L+    ++E
Sbjct: 404 GTGAIMAFLKQEAEKDE 420


>gi|427783827|gb|JAA57365.1| Putative leucine-rich repeat protein shoc-2 [Rhipicephalus
           pulchellus]
          Length = 626

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 138/432 (31%), Positives = 208/432 (48%), Gaps = 30/432 (6%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N LT L + L A+   L  L    N LN +PE +  L+ L  L L  NRI  +  +I+  
Sbjct: 201 NSLTTLPDTL-ANLKQLRVLDVRHNKLNEIPEVVYKLTSLTTLFLRFNRIREVSENIANL 259

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLS 127
            +L    +  N +  LPA +GKL++L T D  +N LK    E    ++LS LD+ +N L 
Sbjct: 260 TNLTMLSLRENKIRELPAGIGKLTQLVTFDASNNHLKHLPAEIGNCVQLSTLDVQHNELV 319

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY---LRSRLPENEDSEASTTK 184
            LP  IG +  L +  +  N L  +  SL N            L S+LPE     AS T 
Sbjct: 320 DLPDTIGNLMVLSRFGIRYNQLTAVPKSLSNCVLITDFNVESNLVSQLPEG--LLASFTN 377

Query: 185 EDLITM-------------ATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNS 230
              +T+             A   +VTS  +++E   ++ IP  I+  A  ++KL++  N 
Sbjct: 378 LHTLTLSRNNFASYPSGGPAQFTTVTS--INMEHNQINKIPFGIFSRAKHLSKLNMKENQ 435

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           +  LP +L +  ++  L L  N++   PD I   L  L  L L NN LR++P+     + 
Sbjct: 436 LTSLPLDLGTWTTMVELNLGTNQLNKIPDDI-QYLVCLEVLILSNNLLRRLPAT-IGSLG 493

Query: 291 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
            L++LDL  N +  LP       L +LQ L ++  QL   P  I  L  L  L + +N+L
Sbjct: 494 ALRVLDLEENRLDGLPNE--IGHLKNLQRLVVQSNQLTNLPRAIGYLVNLTYLSVGENNL 551

Query: 350 QSIPEGFKNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGT 408
             IPE    L +L  L ++DN N+ +LP EL L   +LQ + ++  PL  I   I++ G 
Sbjct: 552 NQIPEEIGTLENLESLYINDNPNLHSLPFELALCT-NLQIMSIENCPLSQIPAEIVNGGP 610

Query: 409 KAVLKYLKDKIP 420
             V++YLK K P
Sbjct: 611 SLVIQYLKMKGP 622



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 208/429 (48%), Gaps = 29/429 (6%)

Query: 2   SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 61
           ++LD+  + +TVL ++ +   + L E     N L  +P+ +GSL  L  L L +N + ++
Sbjct: 148 TRLDLSKSSITVLPSS-VRELSHLEEFYLYGNKLATLPDELGSLVHLETLALSENSLTTL 206

Query: 62  PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 120
           P +++    L    + +N L+ +P  + KL+ L TL L  N+++E       L  L++L 
Sbjct: 207 PDTLANLKQLRVLDVRHNKLNEIPEVVYKLTSLTTLFLRFNRIREVSENIANLTNLTMLS 266

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           L  N +  LP  IGK+T L     + N L+ L + + N    + L      +  NE  + 
Sbjct: 267 LRENKIRELPAGIGKLTQLVTFDASNNHLKHLPAEIGNCVQLSTLD-----VQHNELVDL 321

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-LS 239
             T  +L+ ++ R  +   +       L+A+P  +     IT  ++  N + +LP   L+
Sbjct: 322 PDTIGNLMVLS-RFGIRYNQ-------LTAVPKSLSNCVLITDFNVESNLVSQLPEGLLA 373

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           S  +L TL LSRN    +P       ++++ + +++N + ++P   F     L  L++  
Sbjct: 374 SFTNLHTLTLSRNNFASYPSGGPAQFTTVTSINMEHNQINKIPFGIFSRAKHLSKLNMKE 433

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N + SLP +    +   + EL L   QL + P DI  L  L +L LS N L+ +P    +
Sbjct: 434 NQLTSLPLD--LGTWTTMVELNLGTNQLNKIPDDIQYLVCLEVLILSNNLLRRLPATIGS 491

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK-- 416
           L +L  LDL +N +  LP E+G L+ +LQ L +  N L ++ R I   G    L YL   
Sbjct: 492 LGALRVLDLEENRLDGLPNEIGHLK-NLQRLVVQSNQLTNLPRAI---GYLVNLTYLSVG 547

Query: 417 ----DKIPE 421
               ++IPE
Sbjct: 548 ENNLNQIPE 556



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 109/269 (40%), Gaps = 59/269 (21%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ +++E N++  +   + +    L++L   +N L  +P  +G+ + ++ L+L  N++  
Sbjct: 402 VTSINMEHNQINKIPFGIFSRAKHLSKLNMKENQLTSLPLDLGTWTTMVELNLGTNQLNK 461

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IP  I     L    + NN L  LPA +G L                        L VLD
Sbjct: 462 IPDDIQYLVCLEVLILSNNLLRRLPATIGSLGA----------------------LRVLD 499

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           L  N L GLP EIG +  L++L++  N L  L         P  + YL            
Sbjct: 500 LEENRLDGLPNEIGHLKNLQRLVVQSNQLTNL---------PRAIGYL------------ 538

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELS 239
                          V    LS+   NL+ IP EI     +  L ++ N ++  LP EL+
Sbjct: 539 ---------------VNLTYLSVGENNLNQIPEEIGTLENLESLYINDNPNLHSLPFELA 583

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSL 268
            C +LQ + +    +   P  I+    SL
Sbjct: 584 LCTNLQIMSIENCPLSQIPAEIVNGGPSL 612


>gi|255081536|ref|XP_002507990.1| predicted protein [Micromonas sp. RCC299]
 gi|226523266|gb|ACO69248.1| predicted protein [Micromonas sp. RCC299]
          Length = 323

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 177/380 (46%), Gaps = 63/380 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L+++G  LT      +   + L  L  + N L  +P  IG L+ L+ LDLH N++ S
Sbjct: 6   VNELELDGLGLTGAVPAEVGRLSALRVLYLNDNQLRNVPAEIGQLTSLVTLDLHANQLTS 65

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I    SL    +  N L+++PAE+G+L+ L  L L  NQL     E  QL  L+ L
Sbjct: 66  VPAEIGQLTSLVRLDLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEIGQLTSLAHL 125

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LS N L+ +P EIG++T+L  L ++ N L ++         PA +  L S         
Sbjct: 126 YLSRNQLTSVPAEIGQLTSLAHLYISNNQLTSV---------PAEIGQLTSL-------- 168

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                               EL L G  L+++P+EI +   + KLDL+ N +  LP E+ 
Sbjct: 169 -------------------TELYLNGNKLTSVPAEIGQLTSLEKLDLAGNQLTSLPAEIG 209

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              SL  L L  N++   P  I   L+SL+ L L+ N L  VP++               
Sbjct: 210 QLMSLTELNLHANQLTSVPAEI-GQLTSLTELYLNANQLTSVPAE--------------- 253

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                        L  L+ L+L   QLR    +I +L  L+ L L  N L S+P     L
Sbjct: 254 ----------IGQLTSLESLFLGNNQLRNVLAEIGQLTSLKWLYLEDNKLTSLPAEIGQL 303

Query: 360 TSLTELDLSDNNISALPPEL 379
           TSL  L L+ N +++LP E+
Sbjct: 304 TSLMMLHLNGNQLTSLPAEI 323



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 166/341 (48%), Gaps = 41/341 (12%)

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 118
           ++P+ +    +L   Y+ +N L  +PAE+G+L+ L TLDLH+NQL     E  QL  L  
Sbjct: 19  AVPAEVGRLSALRVLYLNDNQLRNVPAEIGQLTSLVTLDLHANQLTSVPAEIGQLTSLVR 78

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LDL  N L+ +P EIG++T+L  L L+ N L ++ + +  G   +L     SR   N+ +
Sbjct: 79  LDLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEI--GQLTSLAHLYLSR---NQLT 133

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                   L ++A         L +    L+++P+EI +   +T+L L+ N +  +P E+
Sbjct: 134 SVPAEIGQLTSLA--------HLYISNNQLTSVPAEIGQLTSLTELYLNGNKLTSVPAEI 185

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
               SL+ L L+ N++   P  I   L SL+ L L  N L  VP++              
Sbjct: 186 GQLTSLEKLDLAGNQLTSLPAEI-GQLMSLTELNLHANQLTSVPAE-------------- 230

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
                         L  L ELYL   QL   P +I +L  L  L L  N L+++      
Sbjct: 231 -----------IGQLTSLTELYLNANQLTSVPAEIGQLTSLESLFLGNNQLRNVLAEIGQ 279

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LTSL  L L DN +++LP E+G L  SL  L L+GN L S+
Sbjct: 280 LTSLKWLYLEDNKLTSLPAEIGQL-TSLMMLHLNGNQLTSL 319



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 156/308 (50%), Gaps = 25/308 (8%)

Query: 115 RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           R++ L+L    L+G +P E+G+++ LR L L  N LR +         PA +  L S + 
Sbjct: 5   RVNELELDGLGLTGAVPAEVGRLSALRVLYLNDNQLRNV---------PAEIGQLTSLVT 55

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
            +  +   T+    I   T L      L L+   L+++P+EI +   +  L LSRN +  
Sbjct: 56  LDLHANQLTSVPAEIGQLTSL----VRLDLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLS 111

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           +P E+    SL  L LSRN++   P  I   L+SL+ L + NN L  VP++    +  L 
Sbjct: 112 VPAEIGQLTSLAHLYLSRNQLTSVPAEI-GQLTSLAHLYISNNQLTSVPAE-IGQLTSLT 169

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L L+ N + S+P       L  L++L L   QL   P +I +L  L  L+L  N L S+
Sbjct: 170 ELYLNGNKLTSVP--AEIGQLTSLEKLDLAGNQLTSLPAEIGQLMSLTELNLHANQLTSV 227

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVL 412
           P     LTSLTEL L+ N ++++P E+G L  SL++L L  N LR++   I   G    L
Sbjct: 228 PAEIGQLTSLTELYLNANQLTSVPAEIGQL-TSLESLFLGNNQLRNVLAEI---GQLTSL 283

Query: 413 K--YLKDK 418
           K  YL+D 
Sbjct: 284 KWLYLEDN 291


>gi|418744841|ref|ZP_13301186.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794172|gb|EKR92082.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 485

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 132/374 (35%), Positives = 191/374 (51%), Gaps = 21/374 (5%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +P+ IG+L  L  L+L  N++ ++P  I     L    + +N L+ LP E+G L 
Sbjct: 119 NKLTTLPKEIGNLQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQ 178

Query: 93  KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
           KL TLDL  NQLK    E  +L +L  L L NN L+ LP EIG +  L++L L  N   T
Sbjct: 179 KLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTT 238

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
           L   + N      L    SRL         TT    I     L    +EL+L     + +
Sbjct: 239 LPEEIGNLQKLQKLSLAHSRL---------TTLPKEIGNLQNL----QELNLNSNQFTTL 285

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P EI    ++  LDL+ + +  LP E+     LQ L L +N++K  P  I   L +L  L
Sbjct: 286 PEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEI-GKLQNLKNL 344

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
            L+ N L  +P +   ++  LQ L L  N + +LPE     +L  LQEL L   +L+  P
Sbjct: 345 SLNGNELTTLPKE-IGNLQNLQELSLGSNQLTTLPE--KIGNLQKLQELSLAGNRLKTLP 401

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +I  LQ L+ L+L+ N L ++P+  +NL SL  L+LS N++ + P E+G L+  L+ L 
Sbjct: 402 KEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSLISFPEEIGKLQ-KLKWLY 460

Query: 391 LDGNP-LRSIRRTI 403
           L GNP LRS +  I
Sbjct: 461 LGGNPFLRSQKEKI 474



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 164/329 (49%), Gaps = 43/329 (13%)

Query: 77  GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGK 135
           G N L+ LP E+G L  L  L+L  NQL     E   L +L  LDLS+N L+ LP EIG 
Sbjct: 117 GGNKLTTLPKEIGNLQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGN 176

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           +  L+ L L  N L+TL         P  ++ L+         EA               
Sbjct: 177 LQKLQTLDLAQNQLKTL---------PKEIEKLQKL-------EA--------------- 205

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
                L L    L+ +P EI     + +L+L+ N    LP E+ +   LQ L L+ +++ 
Sbjct: 206 -----LHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLT 260

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             P  I  +L +L  L L++N    +P +   ++  LQ LDL+Y+ + +LP+      L 
Sbjct: 261 TLPKEI-GNLQNLQELNLNSNQFTTLPEE-IGNLQKLQTLDLNYSRLTTLPK--EIGKLQ 316

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
            LQ+L L + QL+  P +I +LQ L+ L L+ N L ++P+   NL +L EL L  N ++ 
Sbjct: 317 KLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTT 376

Query: 375 LPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           LP ++G L+  LQ L L GN L+++ + I
Sbjct: 377 LPEKIGNLQ-KLQELSLAGNRLKTLPKEI 404



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 52/125 (41%), Gaps = 24/125 (19%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L + GN+LT L    I +   L EL    N L  +PE IG+L +L  L L  NR+ +
Sbjct: 341 LKNLSLNGNELTTLPKE-IGNLQNLQELSLGSNQLTTLPEKIGNLQKLQELSLAGNRLKT 399

Query: 61  IPSSIS-----------------------GCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P  I                           SL    +  N+L + P E+GKL KL  L
Sbjct: 400 LPKEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSLISFPEEIGKLQKLKWL 459

Query: 98  DLHSN 102
            L  N
Sbjct: 460 YLGGN 464


>gi|455789995|gb|EMF41891.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 595

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 192/415 (46%), Gaps = 26/415 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ +
Sbjct: 165 LQKLWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLAT 223

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+ NN L+  P E+G+L  L  L    N+L     E  QL+ L  L
Sbjct: 224 LPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLGSPENRLTALPKEMGQLQNLQTL 283

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L NN L+  P EIG++  L+ L L  NPL       +    P     LR  + EN    
Sbjct: 284 NLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLRE-VAENGVYR 342

Query: 180 ASTTKEDLITMATRLSVTSKELS------------LEGMNL-----SAIPSEIWEAGEIT 222
                ++       LS+  K+ S            L G+NL     S +P EI     + 
Sbjct: 343 NLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLK 402

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
            L L  N ++ +P E+    +L+ L L  N+++  P  I   L +L  L L  N L+  P
Sbjct: 403 YLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEI-GQLRNLQKLSLHQNTLKIFP 461

Query: 283 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           ++  + +  LQ LDLS N   + P+      L +LQ L L+R QL     +I +LQ L+ 
Sbjct: 462 AE-IEQLKKLQKLDLSVNQFTTFPK--EIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQE 518

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           LDL+ N    +P+    L  L  LDL +N ++ LP E+G L+ +LQ L L  N L
Sbjct: 519 LDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ-NLQWLYLQNNQL 572



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 192/423 (45%), Gaps = 46/423 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G KLT L    I     L EL    NLL  +P+ IG L  L  LDL  N++ + P+
Sbjct: 53  LNLSGEKLTALPKE-IGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPA 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L    +  N L  LP E+G+L  L  L L+ N+L  +  E  QL+ L  L LS
Sbjct: 112 VIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEAS 181
            N L+ LP EIG++  L+ L L  N   TL         P  +  L++    N +D++ +
Sbjct: 172 ENRLTALPKEIGQLKNLQTLDLQDNQFTTL---------PKEIGQLQNLQTLNLQDNQLA 222

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
           T   ++  +        +EL L    L+  P EI +   +  L    N +  LP E+   
Sbjct: 223 TLPVEIGQLQ-----NLQELYLRNNRLTVFPKEIGQLQNLQMLGSPENRLTALPKEMGQL 277

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-------------------LRQVP 282
            +LQTL L  N++  +P  I   L +L  L+L  NP                   LR+V 
Sbjct: 278 QNLQTLNLVNNRLTVFPKEI-GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 336

Query: 283 SDG-FKDIPM-----LQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDIL 334
            +G ++++ +     L++ +LS       ++ P       +L+ L L        P +I 
Sbjct: 337 ENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEIS 396

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           RL+ L+ L L  N L++IP     L +L  L+L  N +  LP E+G L  +LQ L L  N
Sbjct: 397 RLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLR-NLQKLSLHQN 455

Query: 395 PLR 397
            L+
Sbjct: 456 TLK 458



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 195/433 (45%), Gaps = 48/433 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+L      +I     L  L  S+N L  +P  IG L  L  L L++N++ +
Sbjct: 96  LQELDLRDNQLATFPA-VIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKNKLTT 154

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
            P  I    +L + ++  N L+ALP E+G+L  L TLDL  NQ      E  QL+ L  L
Sbjct: 155 FPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTL 214

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L +N L+ LP EIG++  L++L L  N L      +        L+ L S  PEN  + 
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQN---LQMLGS--PENRLTA 269

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL--------SRNSI 231
                  L  + T        L+L    L+  P EI +   +  L+L         R  I
Sbjct: 270 LPKEMGQLQNLQT--------LNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRI 321

Query: 232 QELPP-------ELSSCASLQTLILSRN----------KIKDWPDA---ILTSLSSLSCL 271
           Q+L P       E++     + L L++           + KD+  +   ++    +L  L
Sbjct: 322 QKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGL 381

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
            L +     +P +    +  L+ L L  N + ++P       L +L+ L L   +L   P
Sbjct: 382 NLYDCGFSTLPKE-ISRLKNLKYLALGLNGLKNIP--SEIGQLKNLEALNLEANELERLP 438

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +I +L+ L+ L L QN+L+  P   + L  L +LDLS N  +  P E+G LE +LQ L 
Sbjct: 439 KEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE-NLQTLN 497

Query: 391 LDGNPLRSIRRTI 403
           L  N L ++   I
Sbjct: 498 LQRNQLTNLTAEI 510



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 145/289 (50%), Gaps = 29/289 (10%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS   L+ LP EIG++  L++L L  N                LL  L   + 
Sbjct: 48  LNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWN----------------LLTVLPKEIG 91

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSR 228
           + E+ +    +++   +AT  +V  +   LE ++LS      +P+EI +   +  L L +
Sbjct: 92  QLENLQELDLRDN--QLATFPAVIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYK 149

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +   P E+    +LQ L LS N++   P  I   L +L  L L +N    +P +    
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQDNQFTTLPKE-IGQ 207

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  LQ L+L  N +A+LP       L +LQELYLR  +L   P +I +LQ L++L   +N
Sbjct: 208 LQNLQTLNLQDNQLATLP--VEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLGSPEN 265

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L ++P+    L +L  L+L +N ++  P E+G L+ +LQ L L  NPL
Sbjct: 266 RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQ-NLQDLELLMNPL 313



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 121/229 (52%), Gaps = 8/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           ++ EA T ++  +T A +  +  + L+L G  L+A+P EI +   + +L+L  N +  LP
Sbjct: 30  DEVEAGTYRD--LTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L L  N++  +P A++  L  L  L L  N L  +P++    +  LQ L
Sbjct: 88  KEIGQLENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IGQLQNLQDL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L  N + + P+      L +LQ+L+L   +L   P +I +L+ L+ LDL  N   ++P+
Sbjct: 146 GLYKNKLTTFPK--EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L  L+L DN ++ LP E+G L+ +LQ L L  N L    + I
Sbjct: 204 EIGQLQNLQTLNLQDNQLATLPVEIGQLQ-NLQELYLRNNRLTVFPKEI 251



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 96/234 (41%), Gaps = 37/234 (15%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ I  L  L  L L  N + +IPS I    +L    +  N L  LP E+G+L  L  L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKL 450

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            LH N LK +  E  QL+ L  LDLS N  +  P EIGK+  L+ L L  N L  L + +
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEI 510

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
             G    L                                  +EL L     + +P EI 
Sbjct: 511 --GQLQNL----------------------------------QELDLNDNQFTVLPKEIG 534

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +  ++  LDL  N +  LP E+    +LQ L L  N++       +  L  L C
Sbjct: 535 KLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRKLLPLKC 588



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 7/144 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N L +     I     L +L  S N     P+ IG L  L  L+L +N++ +
Sbjct: 447 LQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTN 505

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           + + I    +L E  + +N  + LP E+GKL KL TLDL +NQL     E  QL+ L  L
Sbjct: 506 LTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 565

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL 143
            L NN LS     + +   +RKLL
Sbjct: 566 YLQNNQLS-----LKEQERIRKLL 584


>gi|167387178|ref|XP_001738053.1| leucine-rich repeat containing protein [Entamoeba dispar SAW760]
 gi|165898880|gb|EDR25633.1| leucine-rich repeat containing protein, putative [Entamoeba dispar
           SAW760]
          Length = 850

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 207/408 (50%), Gaps = 47/408 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
            +++++LT L    N  N  P+ I  L  L  LDL  N+I  IPS+I    +L+E  MG 
Sbjct: 46  FSNFSLLTLLRLRGNKFNKFPDPILDLQSLKCLDLSNNQITYIPSNIICLNNLSELIMGQ 105

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP E+G ++ L  +   +N+LKE  +E   L +L+ +DLSNN+ +  P  +GK++
Sbjct: 106 NNLTTLPKEIGIMTTLVNITFPANKLKELPLEMSSLTKLTFVDLSNNNFNKFPQVLGKLS 165

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSV 196
            +R L +  N L  L+   + G     +K+L   +L  N+ ++      +L  + +    
Sbjct: 166 NIRTLWMFYNNLTKLKG--IEG-----IKHLNQLKLLNNKFTQIPKEIFNLTELCS---- 214

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
               L L+   +  IP EI E  ++ ++  +   IQ++P E+ + ++LQ +I+ R+++ +
Sbjct: 215 ----LELDNNLIRKIPREIKELKKLKEIAFTNCLIQKIPEEIIALSNLQEIIIVRSRVNE 270

Query: 257 WP---------------DAILTSLSSL---SCLKLDNNPLRQV---PSDGFKDIPMLQIL 295
           +P               D+++T ++      C+ L+NN L ++   P+D       + IL
Sbjct: 271 FPKFLRKIPKISNLIITDSLITEVNCTLNNCCIILENNKLTEIKCTPNDN------VFIL 324

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           +L  N   L + P   +L  + ELYL    +++     L    ++IL L+ N L S PE 
Sbjct: 325 NLCNN--YLKKIPNTRNLQTINELYLTNNFIQQIEQSELH-SDIKILTLASNKLISFPEK 381

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             +   L EL+LS+N IS LP  L L  P L+ L+L  N L +I  +I
Sbjct: 382 GISYNKLKELNLSNNKISQLPNNLFLFLPYLKILKLGINQLTTIPNSI 429



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 197/426 (46%), Gaps = 59/426 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N++T + +N+I     L+ELI  +N L  +P+ IG ++ L+ +    N++  +P 
Sbjct: 78  LDLSNNQITYIPSNIIC-LNNLSELIMGQNNLTTLPKEIGIMTTLVNITFPANKLKELPL 136

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL---------------HSNQLKEYC 108
            +S    L    + NN  +  P  LGKLS + TL +               H NQLK   
Sbjct: 137 EMSSLTKLTFVDLSNNNFNKFPQVLGKLSNIRTLWMFYNNLTKLKGIEGIKHLNQLKLLN 196

Query: 109 VEACQL--------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 160
            +  Q+         L  L+L NN +  +P EI ++  L+++  T   ++ +   ++   
Sbjct: 197 NKFTQIPKEIFNLTELCSLELDNNLIRKIPREIKELKKLKEIAFTNCLIQKIPEEIIALS 256

Query: 161 TPALLKYLRSRLPENED------------------SEASTTKEDLITMA-----TRLSVT 197
               +  +RSR+ E                     +E + T  +   +      T +  T
Sbjct: 257 NLQEIIIVRSRVNEFPKFLRKIPKISNLIITDSLITEVNCTLNNCCIILENNKLTEIKCT 316

Query: 198 SKE----LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP-PELSSCASLQTLILSRN 252
             +    L+L    L  IP+       I +L L+ N IQ++   EL S   ++ L L+ N
Sbjct: 317 PNDNVFILNLCNNYLKKIPNT-RNLQTINELYLTNNFIQQIEQSELHS--DIKILTLASN 373

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
           K+  +P+  + S + L  L L NN + Q+P++ F  +P L+IL L  N + ++P     S
Sbjct: 374 KLISFPEKGI-SYNKLKELNLSNNKISQLPNNLFLFLPYLKILKLGINQLTTIPN--SIS 430

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
            L  L+EL L   +L E P DIL+L  L  L L+ N +  +P+    L +L  +D S+NN
Sbjct: 431 ILNQLEELNLSHNKLTEFPLDILKLTSLTNLYLTNNYICDLPKNLSQLNNLQIVDFSNNN 490

Query: 372 ISALPP 377
           I+++ P
Sbjct: 491 INSIFP 496



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 2/147 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  NK++ L NNL      L  L    N L  +P +I  L++L  L+L  N++  
Sbjct: 388 LKELNLSNNKISQLPNNLFLFLPYLKILKLGINQLTTIPNSISILNQLEELNLSHNKLTE 447

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE-YCVEACQLRLSVL 119
            P  I    SL   Y+ NN +  LP  L +L+ L  +D  +N +   + +  C   +  L
Sbjct: 448 FPLDILKLTSLTNLYLTNNYICDLPKNLSQLNNLQIVDFSNNNINSIFPIIKCT-TIKSL 506

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTG 146
            L+ N    +P E+  M  L+ +   G
Sbjct: 507 SLAFNKNLHIPSELTLMKQLKNINFIG 533



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 14/237 (5%)

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
           M  + S+ S +LSL  +N  ++         +T L L  N   + P  +    SL+ L L
Sbjct: 23  MKLKHSLKSLDLSLNQIN--SLEPSFSNFSLLTLLRLRGNKFNKFPDPILDLQSLKCLDL 80

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP-MLQILDLSYNIASLPENP 308
           S N+I   P  I+  L++LS L +  N L  +P    K+I  M  ++++++    L E P
Sbjct: 81  SNNQITYIPSNII-CLNNLSELIMGQNNLTTLP----KEIGIMTTLVNITFPANKLKELP 135

Query: 309 -PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
              SSL  L  + L      + P  + +L  +R L +  N+L  + +G + +  L +L L
Sbjct: 136 LEMSSLTKLTFVDLSNNNFNKFPQVLGKLSNIRTLWMFYNNLTKL-KGIEGIKHLNQLKL 194

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILD-RGTK--AVLKYLKDKIPE 421
            +N  + +P E+  L   L +L LD N +R I R I + +  K  A    L  KIPE
Sbjct: 195 LNNKFTQIPKEIFNL-TELCSLELDNNLIRKIPREIKELKKLKEIAFTNCLIQKIPE 250


>gi|398341356|ref|ZP_10526059.1| hypothetical protein LkirsB1_19555 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 400

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 123/369 (33%), Positives = 181/369 (49%), Gaps = 41/369 (11%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+  L  +P+ IG L  L  L L  N++ ++P+ I    +L    +  N L+ LP E+G+
Sbjct: 54  SEQKLKTLPKEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLTTLPNEIGQ 113

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L TLDL  NQL     E  QL+ L VL LSNN L  LP EIG++  L+ L L  N L
Sbjct: 114 LINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYTNQL 173

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
           + L + +        LK L++                              L L    L+
Sbjct: 174 KALPNEI------GQLKNLQT------------------------------LDLSKNILT 197

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P EI +   + +L LS N ++ LP E+    +LQTL LS N++   P+ I   L +L 
Sbjct: 198 ILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEI-GQLKNLY 256

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 329
            L L  N L  +P +    +  L++LDL YN   +  N     L +L+ L LR  Q    
Sbjct: 257 ELYLGKNLLTTLPKE-VGQLKNLKMLDLGYNQFKIIPNE-IEQLQNLRTLRLRNNQFTAL 314

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
           P +I +LQ L++L L+ N L+++P   + L +L  LDL+DN +  LP E+  L+ +LQ L
Sbjct: 315 PKEIRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPNEIEKLQ-NLQVL 373

Query: 390 RLDGNPLRS 398
            L  N L S
Sbjct: 374 DLRNNELSS 382



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 175/368 (47%), Gaps = 64/368 (17%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
            N+LT L N  I     L  L    N L  +P  IG L  L  LDL  N+++ +P  I+ 
Sbjct: 78  NNQLTTLPNE-IGQLKNLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQ 136

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 126
             +L    + NN L  LP E+G+L  L TLDL++NQLK    E  QL+ L  LDLS N L
Sbjct: 137 LQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNIL 196

Query: 127 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 186
           + LP EIG++  LR+L L+ N L+TL         P  +  L                E+
Sbjct: 197 TILPKEIGQLKNLRELYLSSNQLKTL---------PKEIGQL----------------EN 231

Query: 187 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
           L T           L L    L+ +P+EI +   + +L L +N +  LP E+    +L+ 
Sbjct: 232 LQT-----------LHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLKM 280

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 306
           L L  N+ K  P+ I   L +L  L+L NN    +P +  + +  LQ+L L+ N      
Sbjct: 281 LDLGYNQFKIIPNEI-EQLQNLRTLRLRNNQFTALPKE-IRQLQNLQVLFLNNN------ 332

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                             QL+  P +I +LQ L++LDL+ N L+++P   + L +L  LD
Sbjct: 333 ------------------QLKTLPNEIEKLQNLQVLDLNDNQLKTLPNEIEKLQNLQVLD 374

Query: 367 LSDNNISA 374
           L +N +S+
Sbjct: 375 LRNNELSS 382



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 149/303 (49%), Gaps = 28/303 (9%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RL 172
           L + VLDLS   L  LP EIG++  L+ L L  N L TL + +        LK L++  L
Sbjct: 46  LDVRVLDLSEQKLKTLPKEIGQLQNLQTLYLWNNQLTTLPNEI------GQLKNLQTLNL 99

Query: 173 PENEDSEASTTKEDLITMAT------RLSVTSKE---------LSLEGMNLSAIPSEIWE 217
             N+ +        LI + T      +L +  KE         L L    L  +P EI +
Sbjct: 100 DTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQ 159

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              +  LDL  N ++ LP E+    +LQTL LS+N +   P  I   L +L  L L +N 
Sbjct: 160 LENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEI-GQLKNLRELYLSSNQ 218

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
           L+ +P +    +  LQ L LS N + +LP       L +L ELYL +  L   P ++ +L
Sbjct: 219 LKTLPKE-IGQLENLQTLHLSDNQLTTLPN--EIGQLKNLYELYLGKNLLTTLPKEVGQL 275

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           + L++LDL  N  + IP   + L +L  L L +N  +ALP E+  L+ +LQ L L+ N L
Sbjct: 276 KNLKMLDLGYNQFKIIPNEIEQLQNLRTLRLRNNQFTALPKEIRQLQ-NLQVLFLNNNQL 334

Query: 397 RSI 399
           +++
Sbjct: 335 KTL 337



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/153 (39%), Positives = 81/153 (52%), Gaps = 2/153 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N LT+L    I     L EL  S N L  +P+ IG L  L  L L  N++ +
Sbjct: 186 LQTLDLSKNILTILPKE-IGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTT 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E Y+G N L+ LP E+G+L  L  LDL  NQ K    E  QL+ L  L
Sbjct: 245 LPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLKMLDLGYNQFKIIPNEIEQLQNLRTL 304

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
            L NN  + LP EI ++  L+ L L  N L+TL
Sbjct: 305 RLRNNQFTALPKEIRQLQNLQVLFLNNNQLKTL 337



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 110/213 (51%), Gaps = 6/213 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L    L  +P EI +   +  L L  N +  LP E+    +LQTL
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTL 97

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            L  N++   P+ I   L +L  L L +N L  +P +    +  L++L LS N +  LP+
Sbjct: 98  NLDTNQLTTLPNEI-GQLINLQTLDLIHNQLVILPKE-INQLQNLRVLGLSNNQLKILPK 155

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +LQ L L   QL+  P +I +L+ L+ LDLS+N L  +P+    L +L EL 
Sbjct: 156 --EIGQLENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELY 213

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LS N +  LP E+G LE +LQ L L  N L ++
Sbjct: 214 LSSNQLKTLPKEIGQLE-NLQTLHLSDNQLTTL 245


>gi|456825279|gb|EMF73675.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 595

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 192/413 (46%), Gaps = 26/413 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ +
Sbjct: 165 LQKLWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLAT 223

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+ NN L+  P E+G+L  L  L    N+L     E  QL+ L  L
Sbjct: 224 LPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTL 283

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L NN L+  P EIG++  L+ L L  NPL       +    P     LR  + EN    
Sbjct: 284 NLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLRE-VAENGVYR 342

Query: 180 ASTTKEDLITMATRLSVTSKELS------------LEGMNL-----SAIPSEIWEAGEIT 222
                ++       LS+  K+ S            L G+NL     S +P EI     + 
Sbjct: 343 NLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLK 402

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
            L L  N ++ +P E+    +L+ L L  N+++  P  I   L +L  L L  N L+  P
Sbjct: 403 YLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEI-GQLRNLQKLSLHQNTLKIFP 461

Query: 283 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           ++  + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L+ L+ 
Sbjct: 462 AE-IEQLKKLQKLDLSVNQFTTFPK--EIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQE 518

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           LDL+ N    +P+    L  L  LDL +N ++ LP E+G L+ +LQ L L  N
Sbjct: 519 LDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ-NLQWLYLQNN 570



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 193/423 (45%), Gaps = 46/423 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G KLTVL    I     L EL    NLL  +P+ IG L  L  LDL  N++ + P+
Sbjct: 53  LNLSGEKLTVLPKE-IGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPA 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L    +  N L  LP E+G+L  L  L L+ N+L  +  E  QL+ L  L LS
Sbjct: 112 VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEAS 181
            N L+ LP EIG++  L+ L L  N   TL         P  +  L++    N +D++ +
Sbjct: 172 ENRLTALPKEIGQLKNLQTLDLQDNQFTTL---------PKEIGQLQNLQTLNLQDNQLA 222

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
           T   ++  +        +EL L    L+  P EI +   +  L    N +  LP E+   
Sbjct: 223 TLPVEIGQLQ-----NLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQL 277

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-------------------LRQVP 282
            +LQTL L  N++  +P  I   L +L  L+L  NP                   LR+V 
Sbjct: 278 QNLQTLNLVNNRLTVFPKEI-GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 336

Query: 283 SDG-FKDIPM-----LQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDIL 334
            +G ++++ +     L++ +LS       ++ P       +L+ L L        P +I 
Sbjct: 337 ENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEIS 396

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           RL+ L+ L L  N L++IP     L +L  L+L  N +  LP E+G L  +LQ L L  N
Sbjct: 397 RLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLR-NLQKLSLHQN 455

Query: 395 PLR 397
            L+
Sbjct: 456 TLK 458



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 194/429 (45%), Gaps = 48/429 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+L      +I     L  L  S+N L  +P  IG L  L  L L++N++ +
Sbjct: 96  LQELDLRDNQLATFPA-VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTT 154

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
            P  I    +L + ++  N L+ALP E+G+L  L TLDL  NQ      E  QL+ L  L
Sbjct: 155 FPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTL 214

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L +N L+ LP EIG++  L++L L  N L      +        L+ L S  PEN  + 
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQN---LQMLCS--PENRLTA 269

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL--------SRNSI 231
                  L  + T        L+L    L+  P EI +   +  L+L         R  I
Sbjct: 270 LPKEMGQLQNLQT--------LNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRI 321

Query: 232 QELPP-------ELSSCASLQTLILSRN----------KIKDWPDA---ILTSLSSLSCL 271
           Q+L P       E++     + L L++           + KD+  +   ++    +L  L
Sbjct: 322 QKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGL 381

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
            L +     +P +    +  L+ L L  N + ++P       L +L+ L L   +L   P
Sbjct: 382 NLYDCGFSTLPKE-ISRLKNLKYLALGLNGLKNIP--SEIGQLKNLEALNLEANELERLP 438

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +I +L+ L+ L L QN+L+  P   + L  L +LDLS N  +  P E+G LE +LQ L 
Sbjct: 439 KEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE-NLQTLN 497

Query: 391 LDGNPLRSI 399
           L  N L ++
Sbjct: 498 LQRNQLTNL 506



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 144/289 (49%), Gaps = 29/289 (10%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS   L+ LP EIG++  L++L L  N                LL  L   + 
Sbjct: 48  LDVRVLNLSGEKLTVLPKEIGQLKNLQELNLKWN----------------LLTVLPKEIG 91

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSR 228
           + E+ +    +++   +AT  +V  +   LE ++LS      +P+EI     +  L L +
Sbjct: 92  QLENLQELDLRDN--QLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYK 149

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +   P E+    +LQ L LS N++   P  I   L +L  L L +N    +P +    
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQDNQFTTLPKE-IGQ 207

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  LQ L+L  N +A+LP       L +LQELYLR  +L   P +I +LQ L++L   +N
Sbjct: 208 LQNLQTLNLQDNQLATLP--VEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPEN 265

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L ++P+    L +L  L+L +N ++  P E+G L+ +LQ L L  NPL
Sbjct: 266 RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQ-NLQDLELLMNPL 313



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 119/229 (51%), Gaps = 8/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+ E  T ++  +T A +  +  + L+L G  L+ +P EI +   + +L+L  N +  LP
Sbjct: 30  EEVEPGTYRD--LTKALQNPLDVRVLNLSGEKLTVLPKEIGQLKNLQELNLKWNLLTVLP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L L  N++  +P A++  L  L  L L  N L  +P++    +  LQ L
Sbjct: 88  KEIGQLENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IGRLQNLQDL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L  N + + P+      L +LQ+L+L   +L   P +I +L+ L+ LDL  N   ++P+
Sbjct: 146 GLYKNKLTTFPK--EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L  L+L DN ++ LP E+G L+ +LQ L L  N L    + I
Sbjct: 204 EIGQLQNLQTLNLQDNQLATLPVEIGQLQ-NLQELYLRNNRLTVFPKEI 251



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 98/234 (41%), Gaps = 37/234 (15%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ I  L  L  L L  N + +IPS I    +L    +  N L  LP E+G+L  L  L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKL 450

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            LH N LK +  E  QL+ L  LDLS N  +  P EIGK+  L+ L L  N L  L    
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNL---- 506

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                PA ++ L++                            +EL L     + +P EI 
Sbjct: 507 -----PAEIEQLKN---------------------------LQELDLNDNQFTVLPKEIG 534

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +  ++  LDL  N +  LP E+    +LQ L L  N+        +  L  L C
Sbjct: 535 KLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKC 588



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 65/128 (50%), Gaps = 2/128 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N L +     I     L +L  S N     P+ IG L  L  L+L +N++ +
Sbjct: 447 LQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTN 505

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E  + +N  + LP E+GKL KL TLDL +NQL     E  QL+ L  L
Sbjct: 506 LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 565

Query: 120 DLSNNSLS 127
            L NN  S
Sbjct: 566 YLQNNQFS 573


>gi|417782158|ref|ZP_12429891.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410777751|gb|EKR62396.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 447

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 129/399 (32%), Positives = 197/399 (49%), Gaps = 27/399 (6%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N+LTVL    I     L EL  + N L  +PE IG L  L  L L +N++ ++P  I   
Sbjct: 61  NELTVLPKE-IGKLQNLQELNLNYNKLTTLPEEIGQLQNLQILHLCENQLTTLPKEIGQL 119

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLS 127
             L   ++ +N L+ LP E+G+L  L  L+L+  QL     E  +L +L VL L  N  +
Sbjct: 120 QRLQILHLAHNKLTTLPEEIGQLQNLQELNLNGWQLSTLPKEIGKLQKLQVLSLDLNERT 179

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            LP EIG++  L+ L L  N L  L   +++      L+ L+         E +     L
Sbjct: 180 TLPKEIGQLQNLQILYLRANQLTNLPKEIIH------LQKLQ---------ELNLNHNQL 224

Query: 188 ITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 245
           IT+   +      K L+LE   L  IP EI +   + KL+L RN +  L   +    +L+
Sbjct: 225 ITLPKEIGKLRNLKILNLEDNQLMIIPKEIEQLENLQKLNLGRNQLTTLTKGIGDLQNLK 284

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASL 304
            L L  N++   P  I   L +L  L L NN L  + S+G   +  LQ LDL +N + +L
Sbjct: 285 ELHLEINQLTTLPKEI-GKLQNLKILNLCNNELTTL-SNGIGRLQNLQKLDLRFNQLTTL 342

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
           P+      L +L+ L L   QL   P  I +LQ L++LDL  N L ++P+    L +L +
Sbjct: 343 PK--EIGKLQNLKVLDLYNNQLTTLPKKIGKLQNLKVLDLDYNQLTTLPKEIGQLQNLRQ 400

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPL--RSIRR 401
           L+L+ N ++ LP ++  L+  L  L L  NP+  + I+R
Sbjct: 401 LNLNHNQLTILPKDIEQLK-KLNTLSLRNNPIASKEIKR 438



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 150/323 (46%), Gaps = 39/323 (12%)

Query: 116 LSVLDLSNN--SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           + +LDL NN   L+ LP EIGK+  L++L L  N L TL   +       +L    ++L 
Sbjct: 51  VRILDLRNNDNELTVLPKEIGKLQNLQELNLNYNKLTTLPEEIGQLQNLQILHLCENQLT 110

Query: 174 ENEDSEASTTKEDLITMATRLSVT----------SKELSLEGMNLSAIPSEIWEAGEITK 223
                     +  ++ +A     T           +EL+L G  LS +P EI +  ++  
Sbjct: 111 TLPKEIGQLQRLQILHLAHNKLTTLPEEIGQLQNLQELNLNGWQLSTLPKEIGKLQKLQV 170

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT-------------------- 263
           L L  N    LP E+    +LQ L L  N++ + P  I+                     
Sbjct: 171 LSLDLNERTTLPKEIGQLQNLQILYLRANQLTNLPKEIIHLQKLQELNLNHNQLITLPKE 230

Query: 264 --SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 320
              L +L  L L++N L  +P +  + +  LQ L+L  N + +L +      L +L+EL+
Sbjct: 231 IGKLRNLKILNLEDNQLMIIPKE-IEQLENLQKLNLGRNQLTTLTKG--IGDLQNLKELH 287

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L   QL   P +I +LQ L+IL+L  N L ++  G   L +L +LDL  N ++ LP E+G
Sbjct: 288 LEINQLTTLPKEIGKLQNLKILNLCNNELTTLSNGIGRLQNLQKLDLRFNQLTTLPKEIG 347

Query: 381 LLEPSLQALRLDGNPLRSIRRTI 403
            L+ +L+ L L  N L ++ + I
Sbjct: 348 KLQ-NLKVLDLYNNQLTTLPKKI 369



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 4/137 (2%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++  N+LT LSN  I     L +L    N L  +P+ IG L  L  LDL+ N++ ++P 
Sbjct: 309 LNLCNNELTTLSNG-IGRLQNLQKLDLRFNQLTTLPKEIGKLQNLKVLDLYNNQLTTLPK 367

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I    +L    +  N L+ LP E+G+L  L  L+L+ NQL     +  QL +L+ L L 
Sbjct: 368 KIGKLQNLKVLDLDYNQLTTLPKEIGQLQNLRQLNLNHNQLTILPKDIEQLKKLNTLSLR 427

Query: 123 NNSLSGLPPEIGKMTTL 139
           NN ++    EI ++  L
Sbjct: 428 NNPIAS--KEIKRIQKL 442


>gi|417781290|ref|ZP_12429042.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778541|gb|EKR63167.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 591

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 192/396 (48%), Gaps = 21/396 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  NKLTVL    I     L  L    N L  + E IG L +L  LDL  N+  +
Sbjct: 73  LQTLDLFDNKLTVLPKE-ILQLQNLQMLGLCCNQLTILSEEIGQLQKLRALDLRANQFAT 131

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    + +N L+ALP E+ +L KL  LDL  NQL     E  QL+ L  L
Sbjct: 132 LPKEILQLQNLQTLNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTL 191

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N  + LP EI ++  L+ L L  N L  L   +       L K  +  L EN+ + 
Sbjct: 192 YLRANQFATLPKEILQLQNLQALNLDSNELTALPKEM-----RQLQKLQKLDLRENQLTT 246

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                  L ++ T        L L    L+ +P EI +   + KL L  N    LP ++ 
Sbjct: 247 LPKEIGQLKSLQT--------LYLLANQLTILPEEIGKLRNLQKLYLCENRFTTLPKDIG 298

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +LQ+L L  N++  +P  I   L +L  L L  N L  +P +    +  LQIL+LSY
Sbjct: 299 QLQNLQSLYLYGNQLTAFPKEI-EQLQNLQILNLSYNRLTTLPEE-IGQLQNLQILNLSY 356

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +  LP+      L +L+ L L  +Q+   P +IL+LQ L  L+ S+  L ++P     
Sbjct: 357 NQLTKLPKE--LGKLRNLKTLDLHAIQITTFPKEILQLQNLEKLNWSRTQLTTLPGEIGQ 414

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           + +L EL+L  N ++ALP E+G L+ +L+ L L+ N
Sbjct: 415 MQNLKELNLEKNQLTALPKEIGRLQ-NLEELNLNSN 449



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 121/372 (32%), Positives = 184/372 (49%), Gaps = 41/372 (11%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L+ +P+ IG L  L  LDL  N++  +P  I    +L    +  N L+ L  E+G+L KL
Sbjct: 60  LSTLPKEIGELQNLQTLDLFDNKLTVLPKEILQLQNLQMLGLCCNQLTILSEEIGQLQKL 119

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDL +NQ      E  QL+ L  L+L +N L+ LP E+ ++  L+KL L  N L TL 
Sbjct: 120 RALDLRANQFATLPKEILQLQNLQTLNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLP 179

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
             +    +   L YLR+       ++ +T  ++++ +        + L+L+   L+A+P 
Sbjct: 180 KEIGQLKSLQTL-YLRA-------NQFATLPKEILQLQN-----LQALNLDSNELTALPK 226

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           E+ +  ++ KLDL  N +  LP E+    SLQTL L  N++   P+ I   L +L  L L
Sbjct: 227 EMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTILPEEI-GKLRNLQKLYL 285

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
             N    +P    KDI  LQ                     +LQ LYL   QL   P +I
Sbjct: 286 CENRFTTLP----KDIGQLQ---------------------NLQSLYLYGNQLTAFPKEI 320

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
            +LQ L+IL+LS N L ++PE    L +L  L+LS N ++ LP ELG L  +L+ L L  
Sbjct: 321 EQLQNLQILNLSYNRLTTLPEEIGQLQNLQILNLSYNQLTKLPKELGKLR-NLKTLDLHA 379

Query: 394 NPLRSIRRTILD 405
             + +  + IL 
Sbjct: 380 IQITTFPKEILQ 391



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 209/438 (47%), Gaps = 53/438 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+   L   ++    + T L    N L  +P+ +  L +L +LDL +N++ +
Sbjct: 119 LRALDLRANQFATLPKEILQLQNLQT-LNLDSNELTALPKEMRQLQKLQKLDLRENQLTT 177

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I    SL   Y+  N  + LP E+ +L  L  L+L SN+L     E  QL +L  L
Sbjct: 178 LPKEIGQLKSLQTLYLRANQFATLPKEILQLQNLQALNLDSNELTALPKEMRQLQKLQKL 237

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPENE 176
           DL  N L+ LP EIG++ +L+ L L  N L  L      L N     L +   + LP+  
Sbjct: 238 DLRENQLTTLPKEIGQLKSLQTLYLLANQLTILPEEIGKLRNLQKLYLCENRFTTLPK-- 295

Query: 177 DSEASTTKEDLITMATRLSVTSKEL----SLEGMNLS-----AIPSEIWEAGEITKLDLS 227
           D       + L     +L+   KE+    +L+ +NLS      +P EI +   +  L+LS
Sbjct: 296 DIGQLQNLQSLYLYGNQLTAFPKEIEQLQNLQILNLSYNRLTTLPEEIGQLQNLQILNLS 355

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT----------------------SL 265
            N + +LP EL    +L+TL L   +I  +P  IL                        +
Sbjct: 356 YNQLTKLPKELGKLRNLKTLDLHAIQITTFPKEILQLQNLEKLNWSRTQLTTLPGEIGQM 415

Query: 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP-------HLQE 318
            +L  L L+ N L  +P    K+I  LQ L+   N+ S   +  FSSLP       +L+ 
Sbjct: 416 QNLKELNLEKNQLTALP----KEIGRLQNLE-ELNLNS--NSNQFSSLPKEIGQLSNLKN 468

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L+L    L   P +I +L +L  L L +NSL+++PE    L +L ELDLS N +S++P E
Sbjct: 469 LHLDHNMLANLPKEIGQLSRLETLTLFRNSLETLPEEIGQLWNLRELDLSYNPLSSIPKE 528

Query: 379 LGLLEPSLQALRLDGNPL 396
           +G L+ +L+ L L   PL
Sbjct: 529 IGQLK-NLRILHLRKTPL 545



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 192/415 (46%), Gaps = 56/415 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L+++ N+LT L   +      L +L   +N L  +P+ IG L  L  L L  N++  
Sbjct: 211 LQALNLDSNELTALPKEM-RQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTI 269

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L + Y+  N  + LP ++G+L  L +L L+ NQL  +  E  QL+ L +L
Sbjct: 270 LPEEIGKLRNLQKLYLCENRFTTLPKDIGQLQNLQSLYLYGNQLTAFPKEIEQLQNLQIL 329

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +LS N L+ LP EIG++  L+ L L+ N L  L         P  L  LR+         
Sbjct: 330 NLSYNRLTTLPEEIGQLQNLQILNLSYNQLTKL---------PKELGKLRN--------- 371

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              K L L  + ++  P EI +   + KL+ SR  +  LP E+ 
Sbjct: 372 ------------------LKTLDLHAIQITTFPKEILQLQNLEKLNWSRTQLTTLPGEIG 413

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM-------L 292
              +L+ L L +N++   P  I   L +L  L L++N      S+ F  +P        L
Sbjct: 414 QMQNLKELNLEKNQLTALPKEI-GRLQNLEELNLNSN------SNQFSSLPKEIGQLSNL 466

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           + L L +N +A+LP+      L  L+ L L R  L   P +I +L  LR LDLS N L S
Sbjct: 467 KNLHLDHNMLANLPKE--IGQLSRLETLTLFRNSLETLPEEIGQLWNLRELDLSYNPLSS 524

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDR 406
           IP+    L +L  L L    ++ LP E+G L+  L+ L L+ +      R  L R
Sbjct: 525 IPKEIGQLKNLRILHLRKTPLARLPDEIGELQ-DLEELILNPDTFEKEEREKLKR 578



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L++ VL+LS   LS LP EIG++  L+ L L  N L  L   ++      +L    ++L 
Sbjct: 48  LKVRVLNLSFQKLSTLPKEIGELQNLQTLDLFDNKLTVLPKEILQLQNLQMLGLCCNQLT 107

Query: 174 ENEDSEASTTK-EDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITK 223
              +      K   L   A + +   KE         L+L+   L+A+P E+ +  ++ K
Sbjct: 108 ILSEEIGQLQKLRALDLRANQFATLPKEILQLQNLQTLNLDSNELTALPKEMRQLQKLQK 167

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           LDL  N +  LP E+    SLQTL L  N+    P  IL  L +L  L LD+N L  +P 
Sbjct: 168 LDLRENQLTTLPKEIGQLKSLQTLYLRANQFATLPKEIL-QLQNLQALNLDSNELTALPK 226

Query: 284 DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 342
           +  + +  LQ LDL  N + +LP+      L  LQ LYL   QL   P +I +L+ L+ L
Sbjct: 227 E-MRQLQKLQKLDLRENQLTTLPKE--IGQLKSLQTLYLLANQLTILPEEIGKLRNLQKL 283

Query: 343 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            L +N   ++P+    L +L  L L  N ++A P E+  L+ +LQ L L  N L ++
Sbjct: 284 YLCENRFTTLPKDIGQLQNLQSLYLYGNQLTAFPKEIEQLQ-NLQILNLSYNRLTTL 339


>gi|365922508|ref|ZP_09446706.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
 gi|364573058|gb|EHM50578.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
          Length = 429

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 179/378 (47%), Gaps = 43/378 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+   +L  L +N I     LTEL    N L  +PE+IG+L+ L RLDL  NR+ +
Sbjct: 53  LGRLDLSFRRLQSLPDN-IGDLIHLTELDLRGNELETLPESIGNLTLLKRLDLKWNRLEA 111

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+S+     L++   G N L+ LP  L   +++  LD+  N+L            L+ L
Sbjct: 112 LPNSLKNLTRLSKLEFGYNQLTRLPETLAGFTQITELDIGDNRLTRVPHYLSNFTNLTKL 171

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L+ N L  LP  +GK+T L  L L+ NPL+                    +LP      
Sbjct: 172 NLARNQLEELPAFLGKLTHLTHLNLSANPLK--------------------QLP------ 205

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                 D I   T L+    EL L G  L  +P  +    ++  LD+  N +  LP  + 
Sbjct: 206 ------DFIGELTNLT----ELELYGNQLGTLPDSLSNLHQLYHLDIGGNLLTTLPESIG 255

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  +L  L    N++   P++I  +L  LSCL L +N L ++P      +  L  LDLSY
Sbjct: 256 ALENLSVLDAHNNRLTSLPESI-GNLQRLSCLSLAHNKLTRLPEQT-SHLLRLSTLDLSY 313

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N + +LP+     +   L  L+L   +L   P  I  L +L ILD+S N L S+P+    
Sbjct: 314 NNLMTLPD--FVCNFSRLTNLHLAHNELTMLPMHIGYLGELEILDVSNNDLGSLPDSVAK 371

Query: 359 LTSLTELDLSDNNISALP 376
           L  LT L+LS N I  LP
Sbjct: 372 LDKLTTLNLSGNQIPFLP 389



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 167/363 (46%), Gaps = 45/363 (12%)

Query: 84  LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKL 142
           +P +  +L+ LG LDL   +L+        L  L+ LDL  N L  LP  IG +T L++L
Sbjct: 43  IPRDASELAGLGRLDLSFRRLQSLPDNIGDLIHLTELDLRGNELETLPESIGNLTLLKRL 102

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATRLSVTSK 199
            L  N L  L +SL N    + L++     +RLPE              T+A    +T  
Sbjct: 103 DLKWNRLEALPNSLKNLTRLSKLEFGYNQLTRLPE--------------TLAGFTQIT-- 146

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           EL +    L+ +P  +     +TKL+L+RN ++ELP  L     L  L LS N +K  PD
Sbjct: 147 ELDIGDNRLTRVPHYLSNFTNLTKLNLARNQLEELPAFLGKLTHLTHLNLSANPLKQLPD 206

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPE------------ 306
            I   L++L+ L+L  N L  +P D   ++  L  LD+  N+  +LPE            
Sbjct: 207 FI-GELTNLTELELYGNQLGTLP-DSLSNLHQLYHLDIGGNLLTTLPESIGALENLSVLD 264

Query: 307 --NPPFSSLPH-------LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
             N   +SLP        L  L L   +L   P     L +L  LDLS N+L ++P+   
Sbjct: 265 AHNNRLTSLPESIGNLQRLSCLSLAHNKLTRLPEQTSHLLRLSTLDLSYNNLMTLPDFVC 324

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           N + LT L L+ N ++ LP  +G L   L+ L +  N L S+  ++        L    +
Sbjct: 325 NFSRLTNLHLAHNELTMLPMHIGYL-GELEILDVSNNDLGSLPDSVAKLDKLTTLNLSGN 383

Query: 418 KIP 420
           +IP
Sbjct: 384 QIP 386



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 130/283 (45%), Gaps = 40/283 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++KL++  N+L  L    +   T LT L  S N L  +P+ IG L+ L  L+L+ N++ +
Sbjct: 168 LTKLNLARNQLEELPA-FLGKLTHLTHLNLSANPLKQLPDFIGELTNLTELELYGNQLGT 226

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S+S    L    +G N L+ LP  +G L  L  LD H+N+L         L RLS L
Sbjct: 227 LPDSLSNLHQLYHLDIGGNLLTTLPESIGALENLSVLDAHNNRLTSLPESIGNLQRLSCL 286

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++N L+ LP +   +  L  L L+ N L TL   + N           SRL       
Sbjct: 287 SLAHNKLTRLPEQTSHLLRLSTLDLSYNNLMTLPDFVCN----------FSRL------- 329

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                       T L +   EL++       +P  I   GE+  LD+S N +  LP  ++
Sbjct: 330 ------------TNLHLAHNELTM-------LPMHIGYLGELEILDVSNNDLGSLPDSVA 370

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
               L TL LS N+I   P  I  +L+ L  L + N  ++ VP
Sbjct: 371 KLDKLTTLNLSGNQIPFLPKFI-ANLTHLCILDVRNTRMK-VP 411



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 4/102 (3%)

Query: 280 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
           ++P D   ++  L  LDLS+  + SLP+N     L HL EL LR  +L   P  I  L  
Sbjct: 42  RIPRDA-SELAGLGRLDLSFRRLQSLPDN--IGDLIHLTELDLRGNELETLPESIGNLTL 98

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L+ LDL  N L+++P   KNLT L++L+   N ++ LP  L 
Sbjct: 99  LKRLDLKWNRLEALPNSLKNLTRLSKLEFGYNQLTRLPETLA 140


>gi|429961438|gb|ELA40983.1| hypothetical protein VICG_02013 [Vittaforma corneae ATCC 50505]
          Length = 875

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 129/408 (31%), Positives = 186/408 (45%), Gaps = 67/408 (16%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           NKL  LS+ +I     L+ L    N L  +P  IG L  L  LDL  N+  S P+ I   
Sbjct: 100 NKLKTLSD-VIGELENLSTLHLDDNELETLPAAIGELENLRDLDLGDNQFESFPTVIRKL 158

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 127
            +L    + NN L + P  + +L KL TL+L  N+LK    E  +L+ L  L+LS N L 
Sbjct: 159 KNLERLILDNNKLESFPTVIAELRKLQTLELLGNKLKLLPDEIGELKNLQYLNLSLNKLE 218

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            LPPEIG++  L+ L L  N L  L         P  +  L                E+L
Sbjct: 219 SLPPEIGELKNLQHLFLGDNKLEIL---------PIAIGEL----------------ENL 253

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
                      ++L L   NL  +P EI +  E+  L LS N ++ LP E+     L+ L
Sbjct: 254 -----------QKLYLHRNNLKTLPVEIEKLKELRILQLSGNKLETLPVEIEKLKELRIL 302

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 307
            LS NK++  P AI   L +L  L L++N L  +P+                        
Sbjct: 303 QLSGNKLETLPVAI-GELENLQKLYLNDNKLETLPA------------------------ 337

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                L +L+EL LR  +L+  P++I  L  L+ LDL  N L+++P     L +L EL+L
Sbjct: 338 -AIGELDNLRELCLRNNKLKILPSEIGELGDLQYLDLKNNKLETLPAAIGELKNLRELNL 396

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSI---RRTILDRGTKAVL 412
           S N +  LP E+  L  S+Q L L GN +  +    RT+  R  +A+ 
Sbjct: 397 SGNKLETLPIEIEKLSGSMQLLNLRGNNISEVGDGERTVGRRELRAIF 444



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 107/190 (56%), Gaps = 6/190 (3%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           +++I S I    ++ KL+LS N+++ LP E+    +LQ L+LS NK+K   D I   L +
Sbjct: 56  ITSIDSNIKRLVKLEKLELSHNNLKALPSEIGELKNLQHLVLSNNKLKTLSDVI-GELEN 114

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           LS L LD+N L  +P+    ++  L+ LDL  N   S P       L +L+ L L   +L
Sbjct: 115 LSTLHLDDNELETLPA-AIGELENLRDLDLGDNQFESFP--TVIRKLKNLERLILDNNKL 171

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
              PT I  L++L+ L+L  N L+ +P+    L +L  L+LS N + +LPPE+G L+ +L
Sbjct: 172 ESFPTVIAELRKLQTLELLGNKLKLLPDEIGELKNLQYLNLSLNKLESLPPEIGELK-NL 230

Query: 387 QALRLDGNPL 396
           Q L L  N L
Sbjct: 231 QHLFLGDNKL 240



 Score = 38.9 bits (89), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIR 400
           ++ + +  + SI    K L  L +L+LS NN+ ALP E+G L+ +LQ L L  N L+++ 
Sbjct: 48  VISICRQGITSIDSNIKRLVKLEKLELSHNNLKALPSEIGELK-NLQHLVLSNNKLKTLS 106

Query: 401 RTI 403
             I
Sbjct: 107 DVI 109


>gi|255082906|ref|XP_002504439.1| predicted protein [Micromonas sp. RCC299]
 gi|226519707|gb|ACO65697.1| predicted protein [Micromonas sp. RCC299]
          Length = 522

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 190/385 (49%), Gaps = 66/385 (17%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
            L   +P  +G L+ L  LDL+ N++ S+P  I    SL +F +G N L+++PAE+G+L+
Sbjct: 194 GLTGAVPAEVGRLTALRELDLNGNQLTSVPVEIGQLTSLVKFGLGGNELTSVPAEIGQLT 253

Query: 93  KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
            L                        LDLS+N L+ +P +IG++T+L  L L GN L ++
Sbjct: 254 SL----------------------QWLDLSDNRLASVPADIGQLTSLEGLGLNGNQLTSV 291

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
                    PA +  L S                            K L L G  L+++P
Sbjct: 292 ---------PAEIWQLTSL---------------------------KVLGLRGNQLTSVP 315

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
           +EI +   +++L+L+ N +  +P E+    SL+ L L  N++   P A +  L+SLS L 
Sbjct: 316 AEIGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVP-AEIGRLTSLSELN 374

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 331
           L+NN L  VP++ ++ +  L+ L L  N + S+P       L  L+ L L   QL   P 
Sbjct: 375 LNNNQLTSVPAEIWQ-LTSLRGLFLGGNRLTSVPAE--IGRLTSLKGLALYGNQLTSVPA 431

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           +I +L  L  L L +N L+S+P     L +L EL L+DN ++++P E+G L  +L +L L
Sbjct: 432 EIGQLTALTELSLQRNKLKSVPAEIGQLATLKELWLNDNLLTSVPAEIGQLR-ALTSLNL 490

Query: 392 DGNPLRSIRRTILDRGTKAVLKYLK 416
           D N L S+   I  R  +A   Y++
Sbjct: 491 DRNRLTSVPAAI--RELRAAGFYVQ 513



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 173/371 (46%), Gaps = 63/371 (16%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T L EL  + N L  +P  IG L+ L++  L  N + S+P+ I    SL    + +N L+
Sbjct: 207 TALRELDLNGNQLTSVPVEIGQLTSLVKFGLGGNELTSVPAEIGQLTSLQWLDLSDNRLA 266

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 141
           ++PA++G+L+ L  L L+ NQL     E  QL  L VL L  N L+ +P EIG++T+L +
Sbjct: 267 SVPADIGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVLGLRGNQLTSVPAEIGQLTSLSE 326

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 201
           L L  N L ++         PA +  L S                            + L
Sbjct: 327 LNLNNNQLTSV---------PAEIWQLTSL---------------------------RGL 350

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
            L G  L+++P+EI     +++L+L+ N +  +P E+    SL+ L L  N++   P A 
Sbjct: 351 FLGGNRLTSVPAEIGRLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVP-AE 409

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYL 321
           +  L+SL  L L  N L  VP++                            L  L EL L
Sbjct: 410 IGRLTSLKGLALYGNQLTSVPAE-------------------------IGQLTALTELSL 444

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGL 381
           +R +L+  P +I +L  L+ L L+ N L S+P     L +LT L+L  N ++++P  +  
Sbjct: 445 QRNKLKSVPAEIGQLATLKELWLNDNLLTSVPAEIGQLRALTSLNLDRNRLTSVPAAIRE 504

Query: 382 LEPSLQALRLD 392
           L  +   ++LD
Sbjct: 505 LRAAGFYVQLD 515



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 138/277 (49%), Gaps = 38/277 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L + GN+LT +    I   T L  L    N L  +P  IG L+ L  L+L+ N++ S
Sbjct: 278 LEGLGLNGNQLTSVPAE-IWQLTSLKVLGLRGNQLTSVPAEIGQLTSLSELNLNNNQLTS 336

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I    SL   ++G N L+++PAE+G+L+ L  L+L++NQL     E  QL  L  L
Sbjct: 337 VPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLSELNLNNNQLTSVPAEIWQLTSLRGL 396

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N L+ +P EIG++T+L+ L L GN L ++         PA +  L           
Sbjct: 397 FLGGNRLTSVPAEIGRLTSLKGLALYGNQLTSV---------PAEIGQL----------- 436

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                       T L+    ELSL+   L ++P+EI +   + +L L+ N +  +P E+ 
Sbjct: 437 ------------TALT----ELSLQRNKLKSVPAEIGQLATLKELWLNDNLLTSVPAEIG 480

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
              +L +L L RN++   P AI    ++   ++LD+ 
Sbjct: 481 QLRALTSLNLDRNRLTSVPAAIRELRAAGFYVQLDDG 517


>gi|418678217|ref|ZP_13239491.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321407|gb|EJO69267.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 377

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 164/350 (46%), Gaps = 43/350 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++  N+   L    I     L EL  +KN L  +P+ IG L  L +L+L+ N+   +P 
Sbjct: 51  LNLSANRFKTLPKE-IGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPK 109

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +    +L E Y+G+N L+ LP E+G+L  L  L+L  NQ K    E  QL+ L  L+L 
Sbjct: 110 EVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLG 169

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++  L+ L L  N L  L + +        L+ L+S            
Sbjct: 170 YNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEI------GQLQNLQS------------ 211

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                             L L    L+ +P+EI +   +  L L  N +  LP E+    
Sbjct: 212 ------------------LYLSTNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIGQLK 253

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +LQTL L  N+    P  I   L +L  L+L+ N L+ +P  G   +  LQ LDL YN  
Sbjct: 254 NLQTLYLRYNQFTTLPKEI-GKLQNLQRLELNYNQLKTLPK-GIGQLQNLQWLDLGYNQF 311

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
             LPE      L +LQELYLR  QL   P +I +LQ L+ L L  N L S
Sbjct: 312 TILPE--EIGKLKNLQELYLRDNQLTTIPEEIGQLQNLQELYLRDNQLSS 359



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 174/369 (47%), Gaps = 50/369 (13%)

Query: 39  PETIGSLSRLIR-------LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           P T   L++ I+       L+L  NR  ++P  I    +L E  +  N L+ LP E+G+L
Sbjct: 32  PGTYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQL 91

Query: 92  SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
             L  L+L+ NQ      E  +L  L  L L +N L+ LP EIG++  LR L LT N  +
Sbjct: 92  KNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFK 151

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
           T+   +        LK L++                              L+L    L+A
Sbjct: 152 TIPKEI------GQLKNLQT------------------------------LNLGYNQLTA 175

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +P+EI +   +  L L  N +  LP E+    +LQ+L LS N++   P+ I   L +L  
Sbjct: 176 LPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEI-GQLQNLQS 234

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 329
           L L +N L  +P++    +  LQ L L YN   +LP+      L +LQ L L   QL+  
Sbjct: 235 LYLGSNQLTILPNE-IGQLKNLQTLYLRYNQFTTLPK--EIGKLQNLQRLELNYNQLKTL 291

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
           P  I +LQ L+ LDL  N    +PE    L +L EL L DN ++ +P E+G L+ +LQ L
Sbjct: 292 PKGIGQLQNLQWLDLGYNQFTILPEEIGKLKNLQELYLRDNQLTTIPEEIGQLQ-NLQEL 350

Query: 390 RLDGNPLRS 398
            L  N L S
Sbjct: 351 YLRDNQLSS 359



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 117/250 (46%), Gaps = 28/250 (11%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E   T  DL T A +  +  + L+L       +P EI +   + +L+L++N +  LP 
Sbjct: 28  QAEEPGTYRDL-TKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPK 86

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD------------ 284
           E+    +L+ L L  N+    P  +   L +L  L L +N L  +P++            
Sbjct: 87  EIGQLKNLRKLNLYDNQFTILPKEV-EKLENLKELYLGSNQLTTLPNEIGQLKNLRVLEL 145

Query: 285 ---GFKDIPM-------LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
               FK IP        LQ L+L YN + +LP       L +LQ LYL   QL   P +I
Sbjct: 146 THNQFKTIPKEIGQLKNLQTLNLGYNQLTALPN--EIGQLKNLQSLYLGSNQLTALPNEI 203

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
            +LQ L+ L LS N L ++P     L +L  L L  N ++ LP E+G L+ +LQ L L  
Sbjct: 204 GQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIGQLK-NLQTLYLRY 262

Query: 394 NPLRSIRRTI 403
           N   ++ + I
Sbjct: 263 NQFTTLPKEI 272


>gi|328768383|gb|EGF78429.1| hypothetical protein BATDEDRAFT_90637 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 632

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 141/432 (32%), Positives = 223/432 (51%), Gaps = 26/432 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP----ETIGSLSRLIRLDLHQN 56
           ++KL+V  N+LT L +  +++   LTEL  S NLL  +     +TI SL +L  LD+  N
Sbjct: 214 LTKLNVSKNQLTSLESVDLSAIVQLTELNLSYNLLANLSAFSIDTI-SLPKLKILDVKHN 272

Query: 57  RILSIPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQL- 114
           R+ S+   ++ C  L +  +  N LS++ P     L +L TLDL  N L     +  QL 
Sbjct: 273 RLSSLTVKLT-CPELVDLCLSFNNLSSIAPGVFFDLIQLETLDLRDNALCVVPDDTLQLH 331

Query: 115 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           RL  LDL+NN++S L PE+G +  L   L+ GNP+R L +      T  LL++L+ R+  
Sbjct: 332 RLKRLDLTNNNISRLQPELGLLHNLTMFLVYGNPIRGLPTL---DSTVKLLEHLQKRIVI 388

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI-PSEIWEAGEITKLDLSRNSIQE 233
              S       +   ++  +  +     L  +  S++ PS+   +  I  ++LS   +  
Sbjct: 389 PASSHQIQPNANNAVVSRGIDQSDSLPPLHHLQQSSVAPSQQEYSSRI--MNLSNQGLDV 446

Query: 234 LPPELSSCASL--QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 291
           L  ++ S       T+ +S+N++K+ P+      +S+  L    N L   P+  F     
Sbjct: 447 LGGDILSNFDFAPSTIDVSQNRLKNLPNHFNEYSNSVVTLIARQNLLTVFPNIPFGH--- 503

Query: 292 LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
           L+ILDLS N I  L E+ P   LP L EL L   QL   P+  L    L +L +S N L+
Sbjct: 504 LKILDLSRNKITQLSESLPL--LPRLDELNLSFNQLVYLPSQ-LSFPNLTVLLVSNNRLE 560

Query: 351 SIPEG--FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGT 408
           +I      + +  +  LD+S+N+I  +PPEL LL P +++L+L GN  R  R  IL +GT
Sbjct: 561 AIDPHMLIQCIPGIQILDVSNNSIQTIPPELALL-PCIKSLQLSGNMFRVPRAAILQKGT 619

Query: 409 KAVLKYLKDKIP 420
           +A+ +YLK +IP
Sbjct: 620 EAICEYLKSRIP 631



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 149/355 (41%), Gaps = 70/355 (19%)

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSG 128
           C L      +N ++A+   +  L  L  LDLH+NQ+                      S 
Sbjct: 98  CELKRLVAADNHITAIDPRIADLGALVMLDLHNNQI----------------------SS 135

Query: 129 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 188
           +P  +G +  L  L L+ N +  L  SL   P                            
Sbjct: 136 IPDVVGSLQALSILNLSFNCITCLPDSLFQLPL--------------------------- 168

Query: 189 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 248
                      EL ++G  L  +   I     ++ LDLS N +  LPP +S    L  L 
Sbjct: 169 ----------VELHVQGNALVQLSDAIGNLSRLSHLDLSDNKLSALPPSISKMTCLTKLN 218

Query: 249 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI--PMLQILDLSYN-IASLP 305
           +S+N++       L+++  L+ L L  N L  + +     I  P L+ILD+ +N ++SL 
Sbjct: 219 VSKNQLTSLESVDLSAIVQLTELNLSYNLLANLSAFSIDTISLPKLKILDVKHNRLSSLT 278

Query: 306 ENPPFSSLPHLQELYLRRMQLRE-APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
                 + P L +L L    L   AP     L QL  LDL  N+L  +P+    L  L  
Sbjct: 279 VK---LTCPELVDLCLSFNNLSSIAPGVFFDLIQLETLDLRDNALCVVPDDTLQLHRLKR 335

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           LDL++NNIS L PELGLL  +L    + GNP+R +    LD   K +L++L+ +I
Sbjct: 336 LDLTNNNISRLQPELGLLH-NLTMFLVYGNPIRGL--PTLDSTVK-LLEHLQKRI 386



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 127/285 (44%), Gaps = 39/285 (13%)

Query: 20  ASWTMLTEL---IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 76
            SW  + EL   +A+ N +  +   I  L  L+ LDLH N+I SIP  +    +L+   +
Sbjct: 92  GSWWEVCELKRLVAADNHITAIDPRIADLGALVMLDLHNNQISSIPDVVGSLQALSILNL 151

Query: 77  GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGK 135
             N ++ LP  L +L  L  L +  N L +       L RLS LDLS+N LS LPP I K
Sbjct: 152 SFNCITCLPDSLFQL-PLVELHVQGNALVQLSDAIGNLSRLSHLDLSDNKLSALPPSISK 210

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MT L KL ++ N L +L                     E+ D  A       I   T L+
Sbjct: 211 MTCLTKLNVSKNQLTSL---------------------ESVDLSA-------IVQLTELN 242

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
           ++   L+    NLSA   +     ++  LD+  N +  L  +L +C  L  L LS N + 
Sbjct: 243 LSYNLLA----NLSAFSIDTISLPKLKILDVKHNRLSSLTVKL-TCPELVDLCLSFNNLS 297

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
                +   L  L  L L +N L  VP D  + +  L+ LDL+ N
Sbjct: 298 SIAPGVFFDLIQLETLDLRDNALCVVPDDTLQ-LHRLKRLDLTNN 341


>gi|418744885|ref|ZP_13301230.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794216|gb|EKR92126.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 367

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 167/360 (46%), Gaps = 64/360 (17%)

Query: 37  GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 96
            +PE IG L  L  L+L +N++ ++P  I     L +  +G N ++ LP E+G+L  L  
Sbjct: 51  ALPEEIGQLQNLKELNLWENKLTTLPQEIGNLQHLQKLDLGFNKITVLPKEIGQLQSLQE 110

Query: 97  LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
           L+L  NQL     E   L+ L  L L  N  + LP EIGK+  L++L L  N L TL   
Sbjct: 111 LNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQELYLNENQLTTLPKE 170

Query: 156 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 215
           + N      L+ L+                              EL L    L+A+P EI
Sbjct: 171 IGN------LQNLQ------------------------------ELYLNENQLTALPKEI 194

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
            +   + KL L+RN +  LP E+ +  +LQ L L +N++   P  I   L +L  L L N
Sbjct: 195 GKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKNQLTTLPKEI-GKLQNLQGLHLGN 253

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
           N L  +P +                           +L  L+ L L + QL   P +I  
Sbjct: 254 NKLTALPIE-------------------------IENLQKLKWLGLNKNQLTTIPKEIGN 288

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           LQ L+ L+LS N L +IP+  +NL  L  LDL +N ++ LP E+G L+ +LQ L L GNP
Sbjct: 289 LQNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGKLQ-NLQDLYLGGNP 347



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 154/323 (47%), Gaps = 43/323 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  NKLT L    I +   L +L    N +  +P+ IG L  L  L+L  N++ +
Sbjct: 62  LKELNLWENKLTTLPQE-IGNLQHLQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQLAT 120

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I     L   ++G N  +ALP E+GKL  L  L L+ NQL     E   L+ L  L
Sbjct: 121 LPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQELYLNENQLTTLPKEIGNLQNLQEL 180

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L+ N L+ LP EIGK+  L+KL+L  N L TL   + N      L+ L+          
Sbjct: 181 YLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIGN------LQNLQG--------- 225

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                L+L+   L+ +P EI +   +  L L  N +  LP E+ 
Sbjct: 226 ---------------------LNLDKNQLTTLPKEIGKLQNLQGLHLGNNKLTALPIEIE 264

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +   L+ L L++N++   P  I  +L +L  L L +N L  +P +  +++  L+ LDL  
Sbjct: 265 NLQKLKWLGLNKNQLTTIPKEI-GNLQNLKELNLSSNQLTTIPKE-IENLQKLETLDLYN 322

Query: 300 N-IASLPENPPFSSLPHLQELYL 321
           N + +LP+      L +LQ+LYL
Sbjct: 323 NQLTTLPK--EIGKLQNLQDLYL 343



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 119/255 (46%), Gaps = 19/255 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  N+L  L    I +   L  L    N    +PE IG L  L  L L++N++ +
Sbjct: 108 LQELNLSFNQLATLPKE-IGNLQHLKRLFLGLNQFTALPEEIGKLQNLQELYLNENQLTT 166

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+  N L+ALP E+GKL  L  L L+ NQL    +E   L+ L  L
Sbjct: 167 LPKEIGNLQNLQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGL 226

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L  N L+ LP EIGK+  L+ L L  N L  L   + N      LK+L           
Sbjct: 227 NLDKNQLTTLPKEIGKLQNLQGLHLGNNKLTALPIEIENLQK---LKWL----------- 272

Query: 180 ASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
               K  L T+   +      KEL+L    L+ IP EI    ++  LDL  N +  LP E
Sbjct: 273 -GLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKE 331

Query: 238 LSSCASLQTLILSRN 252
           +    +LQ L L  N
Sbjct: 332 IGKLQNLQDLYLGGN 346



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 108/202 (53%), Gaps = 6/202 (2%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           KEL+L    L+ +P EI     + KLDL  N I  LP E+    SLQ L LS N++   P
Sbjct: 63  KELNLWENKLTTLPQEIGNLQHLQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLP 122

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
             I  +L  L  L L  N    +P +    +  LQ L L+ N + +LP+     +L +LQ
Sbjct: 123 KEI-GNLQHLKRLFLGLNQFTALPEE-IGKLQNLQELYLNENQLTTLPK--EIGNLQNLQ 178

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           ELYL   QL   P +I +LQ L+ L L++N L ++P    NL +L  L+L  N ++ LP 
Sbjct: 179 ELYLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKNQLTTLPK 238

Query: 378 ELGLLEPSLQALRLDGNPLRSI 399
           E+G L+ +LQ L L  N L ++
Sbjct: 239 EIGKLQ-NLQGLHLGNNKLTAL 259



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 113/224 (50%), Gaps = 33/224 (14%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
           D+E   T  + +   T++ V    L L G  L A+P EI +   + +L+L  N +  LP 
Sbjct: 22  DAEDFHTLNEALQNPTQVRV----LHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQ 77

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+ +   LQ L L  NKI   P  I                           +  LQ L+
Sbjct: 78  EIGNLQHLQKLDLGFNKITVLPKEI-------------------------GQLQSLQELN 112

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           LS+N +A+LP+     +L HL+ L+L   Q    P +I +LQ L+ L L++N L ++P+ 
Sbjct: 113 LSFNQLATLPK--EIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQELYLNENQLTTLPKE 170

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
             NL +L EL L++N ++ALP E+G L+ +LQ L L+ N L ++
Sbjct: 171 IGNLQNLQELYLNENQLTALPKEIGKLQ-NLQKLVLNRNQLTTL 213



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 88/172 (51%), Gaps = 25/172 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+LT L    I     L +L+ ++N L  +P  IG+L  L  L+L +N++ +
Sbjct: 177 LQELYLNENQLTALPKE-IGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKNQLTT 235

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL-------------KEY 107
           +P  I    +L   ++GNN L+ALP E+  L KL  L L+ NQL             KE 
Sbjct: 236 LPKEIGKLQNLQGLHLGNNKLTALPIEIENLQKLKWLGLNKNQLTTIPKEIGNLQNLKEL 295

Query: 108 CVEACQL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
            + + QL           +L  LDL NN L+ LP EIGK+  L+ L L GNP
Sbjct: 296 NLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGKLQNLQDLYLGGNP 347



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 1/85 (1%)

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L+L   +L   P +I +LQ L+ L+L +N L ++P+   NL  L +LDL  N I+ LP E
Sbjct: 42  LHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQEIGNLQHLQKLDLGFNKITVLPKE 101

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTI 403
           +G L+ SLQ L L  N L ++ + I
Sbjct: 102 IGQLQ-SLQELNLSFNQLATLPKEI 125


>gi|418710297|ref|ZP_13271068.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410769233|gb|EKR44475.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 423

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 121/366 (33%), Positives = 180/366 (49%), Gaps = 24/366 (6%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 154 SSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
                   P  ++ L+S   L  N +   + +KE        L  T + L L    L  I
Sbjct: 172 --------PTEIEQLKSLKNLDLNHNEFTTVSKE------VMLLETLENLDLRSNKLKTI 217

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P EI +   +  L L+ N +  LP E+    +L+TL L  N+ + +P  IL   + L   
Sbjct: 218 PKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELN 277

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
              N  L + P +    +  L+ L L +N I +LP     + LP LQEL+L   ++   P
Sbjct: 278 LYYNQ-LVEFPKE-VGQLKSLKYLSLYHNQITTLP--VEVTQLPDLQELHLSGNKITILP 333

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +IL+L+ L  L LS N L ++P+    L  L  L+L +N ++ LP E+  L+ +LQ L 
Sbjct: 334 KEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK-NLQRLE 392

Query: 391 LDGNPL 396
           LD NP+
Sbjct: 393 LDSNPI 398



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 152/328 (46%), Gaps = 43/328 (13%)

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
            L  LP ++G+L  L  LDL  N+      E  QL+ L  L+L+NN L+ LP EIG++  
Sbjct: 52  GLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQN 111

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L++L L  N        LVN P                  E    K              
Sbjct: 112 LQELSLHSN-------ELVNLP-----------------KEIGQFK------------NL 135

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L+L+   L+ +P EI +   + +L L  N +  LP E+    SL+ L L+ N+     
Sbjct: 136 QKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVS 195

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
             ++  L +L  L L +N L+ +P +  + +  L++L L+ N + SLP+      L +L+
Sbjct: 196 KEVML-LETLENLDLRSNKLKTIPKE-IRQLKSLKVLMLTGNQLTSLPK--EIEQLQNLK 251

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L L   + +  P +IL L+ L  L+L  N L   P+    L SL  L L  N I+ LP 
Sbjct: 252 TLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPV 311

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTILD 405
           E+  L P LQ L L GN +  + + IL 
Sbjct: 312 EVTQL-PDLQELHLSGNKITILPKEILQ 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 12/211 (5%)

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
           V + +LS +G  L  +P++I +   + KLDL  N    L  E+     LQ L L+ NK+ 
Sbjct: 43  VRNLDLSFQG--LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYN-IASLPENPPFSS 312
             P  I   L +L  L L +N L  +P +   FK+   LQ L+L  N +  LP+      
Sbjct: 101 VLPKEI-GQLQNLQELSLHSNELVNLPKEIGQFKN---LQKLNLDNNKLTVLPK--EIGQ 154

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L +LQEL L   +L   PT+I +L+ L+ LDL+ N   ++ +    L +L  LDL  N +
Sbjct: 155 LQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKL 214

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             +P E+  L+ SL+ L L GN L S+ + I
Sbjct: 215 KTIPKEIRQLK-SLKVLMLTGNQLTSLPKEI 244


>gi|359459073|ref|ZP_09247636.1| GTPase [Acaryochloris sp. CCMEE 5410]
          Length = 1082

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 174/374 (46%), Gaps = 64/374 (17%)

Query: 72  AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 130
            E Y+ +  L+ +P  L KL  L  + L +NQL     E  QLR L+ LDLSNN L+ LP
Sbjct: 17  GELYLSDEDLTNVPLALAKLDNLTLISLSNNQLTSVPPELAQLRKLTALDLSNNQLTSLP 76

Query: 131 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 190
           PE+ ++  L  L L+ N    +         P  L +L                      
Sbjct: 77  PELAQLKNLTLLYLSNNQFTNI---------PLELTHL---------------------- 105

Query: 191 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 250
                V  +EL      L+++P E+     + KLDL  N +  +PPEL+   +L+ L LS
Sbjct: 106 -----VNLRELDCHSNQLTSVPPELAHLENLNKLDLRDNQLTSVPPELAHLENLKELYLS 160

Query: 251 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPP 309
            N++   P   L  L +L+ L L  N L  VP      +  L++L L  N + SLP  P 
Sbjct: 161 ANQLTHIPQE-LAQLRNLTLLSLSANQLTGVPP-ALAHLENLEVLSLRTNQLTSLP--PE 216

Query: 310 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
            + L +L+ELYLR  +L   P ++  L+ L +L LS N L S+P  F  L +L EL LS 
Sbjct: 217 LAHLANLRELYLRSNKLINVPPELAHLEHLTLLSLSYNQLTSLPPEFAQLKNLKELHLSG 276

Query: 370 NNISALPPELGLLE----------------------PSLQALRLDGNPLRSIRRTILDRG 407
           N +++LPPE   L+                       +L  L L  N L +I   IL +G
Sbjct: 277 NQLTSLPPEFAQLKNLTWLYLRSNQLANLPPEFAQLKNLTELDLRDNQLSNISPEILAQG 336

Query: 408 TKAVLKYLKDKIPE 421
           T A+L +L++++ E
Sbjct: 337 TAAILGHLQEQLQE 350


>gi|455790935|gb|EMF42777.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 423

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/366 (33%), Positives = 180/366 (49%), Gaps = 24/366 (6%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 154 SSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
                   P  ++ L+S   L  N +   + +KE        L  T + L L    L  I
Sbjct: 172 --------PTEIEQLKSLKNLDLNHNEFTTVSKE------VMLLETLENLDLRSNKLKTI 217

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P EI +   +  L L+ N +  LP E+    +L+TL L  N+ + +P  IL   + L   
Sbjct: 218 PKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELN 277

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
              N  L + P +    +  L+ L L +N I +LP     + LP LQEL+L   ++   P
Sbjct: 278 LYYNQ-LVEFPKE-VGQLKSLKYLSLYHNQITTLP--VEVTQLPDLQELHLSGNKITILP 333

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +IL+L+ L  L LS N L ++P+    L  L  L+L +N ++ LP E+  L+ +LQ L 
Sbjct: 334 KEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK-NLQRLE 392

Query: 391 LDGNPL 396
           LD NP+
Sbjct: 393 LDSNPI 398



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 152/328 (46%), Gaps = 43/328 (13%)

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
            L  LP ++G+L  L  LDL  N+      E  QL+ L  L+L+NN L+ LP EIG++  
Sbjct: 52  GLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQN 111

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L++L L  N        LVN P                  E    K              
Sbjct: 112 LQELSLHSN-------ELVNLP-----------------KEIGQFK------------NL 135

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L+L+   L+ +P EI +   + +L L  N +  LP E+    SL+ L L+ N+     
Sbjct: 136 QKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVS 195

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
             ++  L +L  L L +N L+ +P +  + +  L++L L+ N + SLP+      L +L+
Sbjct: 196 KEVML-LETLENLDLRSNKLKTIPKE-IRQLKSLKVLMLTGNQLTSLPKE--IEQLQNLK 251

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L L   + +  P +IL L+ L  L+L  N L   P+    L SL  L L  N I+ LP 
Sbjct: 252 TLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPV 311

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTILD 405
           E+  L P LQ L L GN +  + + IL 
Sbjct: 312 EVTQL-PDLQELHLSGNKITILPKEILQ 338



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 106/208 (50%), Gaps = 10/208 (4%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           + L L  + L  +P++I +   + KLDL  N    L  E+     LQ L L+ NK+   P
Sbjct: 44  RNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLP 103

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
             I   L +L  L L +N L  +P +   FK+   LQ L+L  N +  LP+      L +
Sbjct: 104 KEI-GQLQNLQELSLHSNELVNLPKEIGQFKN---LQKLNLDNNKLTVLPK--EIGQLQN 157

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           LQEL L   +L   PT+I +L+ L+ LDL+ N   ++ +    L +L  LDL  N +  +
Sbjct: 158 LQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTI 217

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P E+  L+ SL+ L L GN L S+ + I
Sbjct: 218 PKEIRQLK-SLKVLMLTGNQLTSLPKEI 244


>gi|410941458|ref|ZP_11373255.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410783407|gb|EKR72401.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 425

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 185/396 (46%), Gaps = 42/396 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G+KL  LS   I     L  L    N L  +P  +G L  L  L+L+ N++  +P 
Sbjct: 53  LNLNGSKLATLSKE-IGKLQNLQVLNLGFNQLTTLPNEVGQLQNLQVLNLYSNKLTILPK 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I    +L    +G N L+ LP E+G+L  L  L+L  N+L     E  QL +L +LDL 
Sbjct: 112 EIGKLRNLQVLNLGFNRLTILPDEVGQLQNLQELNLDLNKLTILPEEIGQLQKLQILDLE 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+  P EIGK+  L+ L L  N L TLR  +V      +L  +         S   T
Sbjct: 172 GNQLTTFPKEIGKLQKLQVLNLGFNQLTTLREEVVQLQNLQILNLI---------SNPLT 222

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
           T    I    +L    +EL+L  + L  +P  I +   +  L+L+   +  LP E+   +
Sbjct: 223 TLPKEIGQLQKL----QELNLYDIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLS 278

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
            LQ L L  N++   P+ I   L  L  L L NNPLR +P    K+I  LQ         
Sbjct: 279 KLQKLYLYGNQLTTLPEEI-GQLKKLQELYLGNNPLRTLP----KEIEQLQ--------- 324

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
                        LQ L+L   Q+   P +I +LQ L+ L+L  N L ++P+    L +L
Sbjct: 325 ------------KLQTLHLESNQITTFPKEIGQLQNLQELNLGFNQLTTLPKEIGQLQNL 372

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
            EL+L  N ++ LP E+G  +  L+ L L  NP+ S
Sbjct: 373 QELNLKFNQLATLPKEIG-QQQKLRKLNLYNNPIAS 407



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 180/355 (50%), Gaps = 20/355 (5%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L+L+ +++ ++   I    +L    +G N L+ LP E+G+L  L  L+L+SN+L     E
Sbjct: 53  LNLNGSKLATLSKEIGKLQNLQVLNLGFNQLTTLPNEVGQLQNLQVLNLYSNKLTILPKE 112

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +LR L VL+L  N L+ LP E+G++  L++L L  N L  L   +  G    L     
Sbjct: 113 IGKLRNLQVLNLGFNRLTILPDEVGQLQNLQELNLDLNKLTILPEEI--GQLQKL----- 165

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
            ++ + E ++ +T  ++ I    +L V    L+L    L+ +  E+ +   +  L+L  N
Sbjct: 166 -QILDLEGNQLTTFPKE-IGKLQKLQV----LNLGFNQLTTLREEVVQLQNLQILNLISN 219

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP E+     LQ L L   ++K  P  I+  L +L  L L+   L  +P +    +
Sbjct: 220 PLTTLPKEIGQLQKLQELNLYDIQLKTLPQGII-QLQNLRGLNLNYTHLTILPKE-IGQL 277

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ L L  N + +LPE      L  LQELYL    LR  P +I +LQ+L+ L L  N 
Sbjct: 278 SKLQKLYLYGNQLTTLPE--EIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLHLESNQ 335

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           + + P+    L +L EL+L  N ++ LP E+G L+ +LQ L L  N L ++ + I
Sbjct: 336 ITTFPKEIGQLQNLQELNLGFNQLTTLPKEIGQLQ-NLQELNLKFNQLATLPKEI 389



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 74/168 (44%), Gaps = 23/168 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL + GN+LT L    I     L EL    N L  +P+ I  L +L  L L  N+I +
Sbjct: 280 LQKLYLYGNQLTTLPEE-IGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLHLESNQITT 338

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
            P  I    +L E  +G N L+ LP E+G+L  L  L+L  NQ                 
Sbjct: 339 FPKEIGQLQNLQELNLGFNQLTTLPKEIGQLQNLQELNLKFNQ----------------- 381

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
                L+ LP EIG+   LRKL L  NP+ + +   +    P  + Y 
Sbjct: 382 -----LATLPKEIGQQQKLRKLNLYNNPIASEKIERIRKLLPKCIIYF 424


>gi|45658593|ref|YP_002679.1| hypothetical protein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|418694153|ref|ZP_13255197.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|418713547|ref|ZP_13274273.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421085480|ref|ZP_15546333.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421103545|ref|ZP_15564142.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45601837|gb|AAS71316.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|409958164|gb|EKO17061.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|410366508|gb|EKP21899.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410432116|gb|EKP76474.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|410790022|gb|EKR83717.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|456986299|gb|EMG21899.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 423

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/366 (33%), Positives = 180/366 (49%), Gaps = 24/366 (6%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 154 SSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
                   P  ++ L+S   L  N +   + +KE        L  T + L L    L  I
Sbjct: 172 --------PTEIEQLKSLKNLDLNHNEFTTVSKE------VMLLETLENLDLRSNKLKTI 217

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P EI +   +  L L+ N +  LP E+    +L+TL L  N+ + +P  IL   + L   
Sbjct: 218 PKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELN 277

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
              N  L + P +    +  L+ L L +N I +LP     + LP LQEL+L   ++   P
Sbjct: 278 LYYNQ-LVEFPKE-VGQLKSLKYLSLYHNQITTLP--VEVTQLPDLQELHLSGNKITILP 333

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +IL+L+ L  L LS N L ++P+    L  L  L+L +N ++ LP E+  L+ +LQ L 
Sbjct: 334 KEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK-NLQRLE 392

Query: 391 LDGNPL 396
           LD NP+
Sbjct: 393 LDSNPI 398



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 152/328 (46%), Gaps = 43/328 (13%)

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
            L  LP ++G+L  L  LDL  N+      E  QL+ L  L+L+NN L+ LP EIG++  
Sbjct: 52  GLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQN 111

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L++L L  N        LVN P                  E    K              
Sbjct: 112 LQELSLHSN-------ELVNLP-----------------KEIGQFK------------NL 135

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L+L+   L+ +P EI +   + +L L  N +  LP E+    SL+ L L+ N+     
Sbjct: 136 QKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVS 195

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
             ++  L +L  L L +N L+ +P +  + +  L++L L+ N + SLP+      L +L+
Sbjct: 196 KEVML-LETLENLDLRSNKLKTIPKE-IRQLKSLKVLMLTGNQLTSLPKE--IEQLQNLK 251

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L L   + +  P +IL L+ L  L+L  N L   P+    L SL  L L  N I+ LP 
Sbjct: 252 TLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPV 311

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTILD 405
           E+  L P LQ L L GN +  + + IL 
Sbjct: 312 EVTQL-PDLQELHLSGNKITILPKEILQ 338



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 12/211 (5%)

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
           V + +LS +G  L  +P++I +   + KLDL  N    L  E+     LQ L L+ NK+ 
Sbjct: 43  VRNLDLSFQG--LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYN-IASLPENPPFSS 312
             P  I   L +L  L L +N L  +P +   FK+   LQ L+L  N +  LP+      
Sbjct: 101 VLPKEI-GQLQNLQELSLHSNELVNLPKEIGQFKN---LQKLNLDNNKLTVLPK--EIGQ 154

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L +LQEL L   +L   PT+I +L+ L+ LDL+ N   ++ +    L +L  LDL  N +
Sbjct: 155 LQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKL 214

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             +P E+  L+ SL+ L L GN L S+ + I
Sbjct: 215 KTIPKEIRQLK-SLKVLMLTGNQLTSLPKEI 244


>gi|260793210|ref|XP_002591605.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
 gi|229276814|gb|EEN47616.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
          Length = 1573

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 213/435 (48%), Gaps = 49/435 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N + +L    +   T +  L  S   L  +P  IG+L++L  LDL  N++ ++P 
Sbjct: 189 LDVRFNPIQMLPAG-VGQLTNIKHLNLSYCKLRILPPEIGNLTQLEWLDLCGNQLQTLPG 247

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            +    ++   Y+ +  +  LP E+G+L++L  L L SN L+    E  QL  +   DLS
Sbjct: 248 EVRYLTNVKHLYLHSCNMHTLPPEVGRLTQLQWLGLSSNNLQTLPSEIGQLTNIKHFDLS 307

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR------SRLPENE 176
              L  LPPE+G++T L  L L+ NPL+TL + +        LK+L       + LP   
Sbjct: 308 LCKLRTLPPEVGRLTQLEWLELSQNPLQTLPADIRQ---LTCLKHLDMSYCQLTLLPR-- 362

Query: 177 DSEASTTKEDLITMATRLSVTSKE----LSLEGMNLS-----AIPSEIWEAGEITKLDLS 227
           +  A T  E L+ +   L + + +    +++E  NLS      +P EI     +  LDLS
Sbjct: 363 EVGALTQLECLVMIRNPLQMLTTDVQHIINIESFNLSQCQLTTLPPEIGRLAHLRWLDLS 422

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD--- 284
            N +Q LPP L   +S++ L LS  K+   P   L  L+ +  L L  NPL+ + ++   
Sbjct: 423 YNPLQILPPNLGQLSSIRHLDLSHCKLHTLPRE-LGKLTQIEWLDLSFNPLQVLLAEVGQ 481

Query: 285 ------------GFKDIP-------MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 324
                           IP        L+ L LS N + +LP  P    L ++  L +   
Sbjct: 482 LTNVKHLDMSECKLHSIPPEVGKLTQLEWLHLSSNPLKTLP--PEVGQLANVTHLDMSEC 539

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
           +LR  P ++ RL+QL+ L+LS N LQ++P     L ++  LDLS   ++ LPPE+G L  
Sbjct: 540 KLRTLPPEVGRLEQLKWLNLSSNPLQALPAQIGQLNNIQNLDLSSCELTTLPPEIGKLT- 598

Query: 385 SLQALRLDGNPLRSI 399
            L+ L +  NPL+++
Sbjct: 599 QLERLNVSDNPLQTL 613



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 185/396 (46%), Gaps = 39/396 (9%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L  LI S N    +P+ +  L+ +  L L++  ++++P+ +     L    +G+N L+ L
Sbjct: 94  LQTLILSNNENIILPDEMSGLTNIRVLKLNKTNMVTVPTVVWRLTHLHTLELGSNTLNVL 153

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
            AE+G LS +  L+L    L    +E  +L +L  LD+  N +  LP  +G++T ++ L 
Sbjct: 154 NAEIGLLSNMEHLNLSKCNLHTLPLEIWRLIQLRWLDVRFNPIQMLPAGVGQLTNIKHLN 213

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L+   LR L   + N             L + E  +    +   +    R     K L L
Sbjct: 214 LSYCKLRILPPEIGN-------------LTQLEWLDLCGNQLQTLPGEVRYLTNVKHLYL 260

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
              N+  +P E+    ++  L LS N++Q LP E+    +++   LS  K++  P  +  
Sbjct: 261 HSCNMHTLPPEVGRLTQLQWLGLSSNNLQTLPSEIGQLTNIKHFDLSLCKLRTLPPEV-G 319

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY--------NIASLPE--------N 307
            L+ L  L+L  NPL+ +P+D  + +  L+ LD+SY         + +L +        N
Sbjct: 320 RLTQLEWLELSQNPLQTLPAD-IRQLTCLKHLDMSYCQLTLLPREVGALTQLECLVMIRN 378

Query: 308 P------PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
           P          + +++   L + QL   P +I RL  LR LDLS N LQ +P     L+S
Sbjct: 379 PLQMLTTDVQHIINIESFNLSQCQLTTLPPEIGRLAHLRWLDLSYNPLQILPPNLGQLSS 438

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
           +  LDLS   +  LP ELG L   ++ L L  NPL+
Sbjct: 439 IRHLDLSHCKLHTLPRELGKLT-QIEWLDLSFNPLQ 473



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 165/377 (43%), Gaps = 63/377 (16%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T+LT L  S + +  +PE +  +  L  LDL   + + +P+ ++   +L    + +  L+
Sbjct: 24  TLLT-LDFSGHYVEQLPEELYGIEELEALDLTGKKGIKLPNELTKLQNLKVLNLNDCNLT 82

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 142
            +PA + KL +L T                      L LSNN    LP E+  +T +R L
Sbjct: 83  TVPAVVMKLPQLQT----------------------LILSNNENIILPDEMSGLTNIRVL 120

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 202
            L        ++++V  PT         RL      E  +   +++     L    + L+
Sbjct: 121 KLN-------KTNMVTVPTVVW------RLTHLHTLELGSNTLNVLNAEIGLLSNMEHLN 167

Query: 203 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 262
           L   NL  +P EIW   ++  LD+  N IQ LP  +    +++ L LS  K++  P  I 
Sbjct: 168 LSKCNLHTLPLEIWRLIQLRWLDVRFNPIQMLPAGVGQLTNIKHLNLSYCKLRILPPEI- 226

Query: 263 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLR 322
            +L+ L  L L  N L+ +P +                            L +++ LYL 
Sbjct: 227 GNLTQLEWLDLCGNQLQTLPGE-------------------------VRYLTNVKHLYLH 261

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
              +   P ++ RL QL+ L LS N+LQ++P     LT++   DLS   +  LPPE+G L
Sbjct: 262 SCNMHTLPPEVGRLTQLQWLGLSSNNLQTLPSEIGQLTNIKHFDLSLCKLRTLPPEVGRL 321

Query: 383 EPSLQALRLDGNPLRSI 399
              L+ L L  NPL+++
Sbjct: 322 T-QLEWLELSQNPLQTL 337



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 112/232 (48%), Gaps = 13/232 (5%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+  L  +P  IG L+ L  LDL  N +  +P ++    S+    + +  L  LP ELGK
Sbjct: 399 SQCQLTTLPPEIGRLAHLRWLDLSYNPLQILPPNLGQLSSIRHLDLSHCKLHTLPRELGK 458

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L+++  LDL  N L+    E  QL  +  LD+S   L  +PPE+GK+T L  L L+ NPL
Sbjct: 459 LTQIEWLDLSFNPLQVLLAEVGQLTNVKHLDMSECKLHSIPPEVGKLTQLEWLHLSSNPL 518

Query: 150 RTLRSSLVNGPTPALLKY----LRSRLPENEDSE-------ASTTKEDLITMATRLSVTS 198
           +TL   +        L      LR+  PE    E       +S   + L     +L+   
Sbjct: 519 KTLPPEVGQLANVTHLDMSECKLRTLPPEVGRLEQLKWLNLSSNPLQALPAQIGQLN-NI 577

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 250
           + L L    L+ +P EI +  ++ +L++S N +Q LP E+    ++  L +S
Sbjct: 578 QNLDLSSCELTTLPPEIGKLTQLERLNVSDNPLQTLPAEIVHLTNISHLKIS 629



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 86/156 (55%), Gaps = 2/156 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N L VL    +   T +  L  S+  L+ +P  +G L++L  L L  N + ++P 
Sbjct: 465 LDLSFNPLQVLLAE-VGQLTNVKHLDMSECKLHSIPPEVGKLTQLEWLHLSSNPLKTLPP 523

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +    ++    M    L  LP E+G+L +L  L+L SN L+    +  QL  +  LDLS
Sbjct: 524 EVGQLANVTHLDMSECKLRTLPPEVGRLEQLKWLNLSSNPLQALPAQIGQLNNIQNLDLS 583

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
           +  L+ LPPEIGK+T L +L ++ NPL+TL + +V+
Sbjct: 584 SCELTTLPPEIGKLTQLERLNVSDNPLQTLPAEIVH 619



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 15/236 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N L +L  NL    + +  L  S   L+ +P  +G L+++  LDL  N +  + +
Sbjct: 419 LDLSYNPLQILPPNL-GQLSSIRHLDLSHCKLHTLPRELGKLTQIEWLDLSFNPLQVLLA 477

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            +    ++    M    L ++P E+GKL++L  L L SN LK    E  QL  ++ LD+S
Sbjct: 478 EVGQLTNVKHLDMSECKLHSIPPEVGKLTQLEWLHLSSNPLKTLPPEVGQLANVTHLDMS 537

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
              L  LPPE+G++  L+ L L+ NPL+ L         PA +  L +    +  S   T
Sbjct: 538 ECKLRTLPPEVGRLEQLKWLNLSSNPLQAL---------PAQIGQLNNIQNLDLSSCELT 588

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           T    I   T+L    + L++    L  +P+EI     I+ L +S  ++ + P E+
Sbjct: 589 TLPPEIGKLTQL----ERLNVSDNPLQTLPAEIVHLTNISHLKISTRTLSKPPAEV 640



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 1/164 (0%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +   T L  L  S N L  +P  +G L+ +  LD+ + ++ ++P  +     L    + +
Sbjct: 502 VGKLTQLEWLHLSSNPLKTLPPEVGQLANVTHLDMSECKLRTLPPEVGRLEQLKWLNLSS 561

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L ALPA++G+L+ +  LDL S +L     E  +L +L  L++S+N L  LP EI  +T
Sbjct: 562 NPLQALPAQIGQLNNIQNLDLSSCELTTLPPEIGKLTQLERLNVSDNPLQTLPAEIVHLT 621

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
            +  L ++   L    + +       + +Y        ED  A 
Sbjct: 622 NISHLKISTRTLSKPPAEVCRQGIATIRQYFEELERSEEDVSAH 665


>gi|291239871|ref|XP_002739845.1| PREDICTED: Lap1-like [Saccoglossus kowalevskii]
          Length = 1530

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 207/414 (50%), Gaps = 23/414 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++LDV  N +  +S+++      L +L+ S N +  +P ++  L  L  LD+ +N+I S
Sbjct: 402 LTELDVGKNMIRCISSDMSNKLDQLEKLVLSDNQIEEIPTSLYQLKSLKELDMRKNKISS 461

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           + + IS   +L    +  N L  +PA + +L KL  LD+ SN L E   E  +L  L +L
Sbjct: 462 LSADISKLENLEILNISGNILDEVPASVYQLRKLKKLDMRSNMLTEISSEISKLEWLEIL 521

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR----------TLRSSLVNGPT----PALL 165
            +SNN L  LP  + K+  L+KL + GN L+           L + +V+G      P  L
Sbjct: 522 VVSNNKLQDLPISVYKLGNLKKLEIEGNKLKYVSPEIFQLQKLETLIVSGNNLQGIPNAL 581

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
             LR +L E    +A   K   ++         + L + G  L  IP+ I +  ++ +++
Sbjct: 582 YNLR-KLKE---LDARNNKITYLSAEICQLKQLQRLVVSGNILHEIPTSICKLKKLKEIN 637

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           +  N++  LP E+S    L+ LI+S NK+ + P  ++  L  L  L + NN +  +  D 
Sbjct: 638 VRSNALTSLPQEISQLTQLEVLIVSCNKLPNVP-PVVYKLKGLKKLDIGNNIISSILPD- 695

Query: 286 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
             ++  LQ+L++SYN       P    L  L+ L L+  ++     D+ +LQ+L +LD+S
Sbjct: 696 IHELNQLQVLNVSYNQLQ-DVTPNIYRLRQLKRLDLQHNKITSPLPDVSKLQELEVLDIS 754

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            N LQ +P     L S+ EL++  N I +L  +L  L+  L+ + L  N + ++
Sbjct: 755 DNKLQELPPSLYQLKSMKELNVGSNEIISLSSDLSQLK-QLRKINLSHNQMNAV 807



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 198/400 (49%), Gaps = 20/400 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL++EGNKL  +S   I     L  LI S N L G+P  + +L +L  LD   N+I  
Sbjct: 541 LKKLEIEGNKLKYVSPE-IFQLQKLETLIVSGNNLQGIPNALYNLRKLKELDARNNKITY 599

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           + + I     L    +  N L  +P  + KL KL  +++ SN L     E  QL +L VL
Sbjct: 600 LSAEICQLKQLQRLVVSGNILHEIPTSICKLKKLKEINVRSNALTSLPQEISQLTQLEVL 659

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            +S N L  +PP + K+  L+KL +  N + ++   +       +L    ++L       
Sbjct: 660 IVSCNKLPNVPPVVYKLKGLKKLDIGNNIISSILPDIHELNQLQVLNVSYNQL------- 712

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                +D+     RL    K L L+   +++   ++ +  E+  LD+S N +QELPP L 
Sbjct: 713 -----QDVTPNIYRLR-QLKRLDLQHNKITSPLPDVSKLQELEVLDISDNKLQELPPSLY 766

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              S++ L +  N+I     + L+ L  L  + L +N +  VP+     +  L+ L++S 
Sbjct: 767 QLKSMKELNVGSNEIISLS-SDLSQLKQLRKINLSHNQMNAVPA-AINQLSQLEDLNMSN 824

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           N  ++ +    S L HL++L +   Q++E P  + +L QL++L+++ N++ ++PE    L
Sbjct: 825 N--NMTKLSGISHLKHLKKLNISFNQVQEVPFSLCKLHQLKVLNVASNNISTLPENISEL 882

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            +L EL+L  +++  +P  LG L   L+ L +  N L  I
Sbjct: 883 HNLEELNLKSSSLQNIPSALGHL-SKLKVLDIRDNHLGKI 921



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 205/399 (51%), Gaps = 21/399 (5%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           ++D+ G +++ +S   +  +T L  L   KN L+ +P+ I +L  L  LD+ QN+  +IP
Sbjct: 13  EIDLRGKQISKISFTKLCRFTNLKALYLGKNNLSALPDKISTLQHLKILDISQNKFDNIP 72

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 121
           S +    SL    +  N++++LP E+ +L++L  L+   NQ+K       +L+ L+ L++
Sbjct: 73  SCVLKLKSLKILDVEGNSVTSLPPEISQLNQLEKLNASCNQIKTVPDAVYKLKSLTELNV 132

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
            NN ++ L   I ++  L  L+++ N L+ + ++L +     LL      +  N  S  +
Sbjct: 133 GNNLITTLSYSISQLQNLEILVVSDNNLQEVPNNLYHLNKLKLLD-----IRGNNISSIA 187

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
           T    L  + T        L +   NL  IP+++++  ++ K D+  N I  +  ++S  
Sbjct: 188 TEISKLKQLNT--------LIVSCNNLRKIPNDVYQLRKLKKFDMRGNKITTVTSDISKL 239

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 300
             L+ LI+S NK+   P  I   L  L  L + +N +R +P      +  L+IL+LS N 
Sbjct: 240 DQLEILIVSSNKLHTIPSDIY-QLRKLRELDVGSNDIRILPD--ISQLKKLEILNLSCNH 296

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
           +  +P +     L  L+EL ++   +    T+I  L+ L +L++S N L  IP     L 
Sbjct: 297 LEKIPSS--IYKLTCLKELNVQSNSITSISTNISELRSLEMLNVSNNKLHEIPPTVCKLK 354

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           +L +LD+ +N I++L PE+  L   L++L + G+ L+ I
Sbjct: 355 TLKKLDMGNNRITSLLPEIAQLN-QLKSLVISGHSLQEI 392



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 198/405 (48%), Gaps = 21/405 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L+V  N +T LS + I+    L  L+ S N L  +P  +  L++L  LD+  N I S
Sbjct: 127 LTELNVGNNLITTLSYS-ISQLQNLEILVVSDNNLQEVPNNLYHLNKLKLLDIRGNNISS 185

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           I + IS    L    +  N L  +P ++ +L KL   D+  N++     +  +L +L +L
Sbjct: 186 IATEISKLKQLNTLIVSCNNLRKIPNDVYQLRKLKKFDMRGNKITTVTSDISKLDQLEIL 245

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            +S+N L  +P +I ++  LR+L +  N +R L       P  + LK L       E   
Sbjct: 246 IVSSNKLHTIPSDIYQLRKLRELDVGSNDIRIL-------PDISQLKKL-------EILN 291

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            S    + I  +       KEL+++  ++++I + I E   +  L++S N + E+PP + 
Sbjct: 292 LSCNHLEKIPSSIYKLTCLKELNVQSNSITSISTNISELRSLEMLNVSNNKLHEIPPTVC 351

Query: 240 SCASLQTLILSRNKIKDW-PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
              +L+ L +  N+I    P+  +  L+ L  L +  + L+++PS  ++ + ML  LD+ 
Sbjct: 352 KLKTLKKLDMGNNRITSLLPE--IAQLNQLKSLVISGHSLQEIPSSVYQ-LKMLTELDVG 408

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
            N+     +   + L  L++L L   Q+ E PT + +L+ L+ LD+ +N + S+      
Sbjct: 409 KNMIRCISSDMSNKLDQLEKLVLSDNQIEEIPTSLYQLKSLKELDMRKNKISSLSADISK 468

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L +L  L++S N +  +P  +  L   L+ L +  N L  I   I
Sbjct: 469 LENLEILNISGNILDEVPASVYQLR-KLKKLDMRSNMLTEISSEI 512


>gi|417760636|ref|ZP_12408653.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417773199|ref|ZP_12421083.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|417784393|ref|ZP_12432099.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|418673942|ref|ZP_13235253.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943556|gb|EKN89156.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409952210|gb|EKO06723.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|410577040|gb|EKQ40038.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579220|gb|EKQ47070.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 423

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/366 (33%), Positives = 180/366 (49%), Gaps = 24/366 (6%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 154 SSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
                   P  ++ L+S   L  N +   + +KE        L  T + L L    L  I
Sbjct: 172 --------PTEIEQLKSLKNLDLNNNEFTTVSKE------VMLLETLENLDLRSNKLKTI 217

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P EI +   +  L L+ N +  LP E+    +L+TL L  N+ + +P  IL   + L   
Sbjct: 218 PKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELN 277

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
              N  L + P +    +  L+ L L +N I +LP     + LP LQEL+L   ++   P
Sbjct: 278 LYYNQ-LVEFPKE-VGQLKSLKYLSLYHNQITTLP--VEVTQLPDLQELHLSGNKITILP 333

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +IL+L+ L  L LS N L ++P+    L  L  L+L +N ++ LP E+  L+ +LQ L 
Sbjct: 334 KEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK-NLQRLE 392

Query: 391 LDGNPL 396
           LD NP+
Sbjct: 393 LDSNPI 398



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 132/311 (42%), Gaps = 42/311 (13%)

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LDLS   L  LP +IG++  L+KL L GN              P +L     +L + +  
Sbjct: 46  LDLSFQGLKTLPNKIGQLKNLQKLDLGGN-------------EPTILSKEIWQLKDLQKL 92

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
             +  K  ++          +ELSL    L  +P EI +   + KL+L  N +  LP E+
Sbjct: 93  NLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEI 152

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
               +LQ L L  NK+   P  I   L SL  L L+NN    V S     +  L+ LDL 
Sbjct: 153 GQLQNLQELSLLSNKLISLPTEI-EQLKSLKNLDLNNNEFTTV-SKEVMLLETLENLDLR 210

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ------- 350
            N + ++P+      L  L+ L L   QL   P +I +LQ L+ L+L +N  Q       
Sbjct: 211 SNKLKTIPK--EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEIL 268

Query: 351 ----------------SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
                             P+    L SL  L L  N I+ LP E+  L P LQ L L GN
Sbjct: 269 ELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQL-PDLQELHLSGN 327

Query: 395 PLRSIRRTILD 405
            +  + + IL 
Sbjct: 328 KITILPKEILQ 338



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 12/211 (5%)

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
           V + +LS +G  L  +P++I +   + KLDL  N    L  E+     LQ L L+ NK+ 
Sbjct: 43  VRNLDLSFQG--LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYN-IASLPENPPFSS 312
             P  I   L +L  L L +N L  +P +   FK+   LQ L+L  N +  LP+      
Sbjct: 101 VLPKEI-GQLQNLQELSLHSNELVNLPKEIGQFKN---LQKLNLDNNKLTVLPK--EIGQ 154

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L +LQEL L   +L   PT+I +L+ L+ LDL+ N   ++ +    L +L  LDL  N +
Sbjct: 155 LQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKL 214

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             +P E+  L+ SL+ L L GN L S+ + I
Sbjct: 215 KTIPKEIRQLK-SLKVLMLTGNQLTSLPKEI 244


>gi|417765321|ref|ZP_12413285.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352503|gb|EJP04688.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 595

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 191/413 (46%), Gaps = 26/413 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ +
Sbjct: 165 LQKLWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLAT 223

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+ NN L   P E+G+L  L  L    N+L     E  QL+ L  L
Sbjct: 224 LPVEIGQLQNLQELYLRNNRLIVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTL 283

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L NN L+  P EIG++  L+ L L  NPL       +    P     LR  + EN    
Sbjct: 284 NLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLRE-VAENGVYR 342

Query: 180 ASTTKEDLITMATRLSVTSKELS------------LEGMNL-----SAIPSEIWEAGEIT 222
                ++       LS+  K+ S            L G+NL     S +P EI     + 
Sbjct: 343 NLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLK 402

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
            L L  N ++ +P E+    +L+ L L  N+++  P  I   L +L  L L  N L+  P
Sbjct: 403 YLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEI-GQLRNLQKLSLHQNTLKIFP 461

Query: 283 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           ++  + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L+ L+ 
Sbjct: 462 AE-IEQLKKLQKLDLSVNQFTTFPK--EIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQE 518

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           LDL+ N    +P+    L  L  LDL +N ++ LP E+G L+ +LQ L L  N
Sbjct: 519 LDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ-NLQWLYLQNN 570



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 192/423 (45%), Gaps = 46/423 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G KLT L  + I     L EL    NLL  +P+ IG L  L  LDL  N++ + P+
Sbjct: 53  LNLSGEKLTALPKD-IGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPA 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L    +  N L  LP E+G+L  L  L L+ N+L  +  E  QL+ L  L LS
Sbjct: 112 VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEAS 181
            N L+ LP EIG++  L+ L L  N   TL         P  +  L++    N +D++ +
Sbjct: 172 ENRLTALPKEIGQLKNLQTLDLQDNQFTTL---------PKEIGQLQNLQTLNLQDNQLA 222

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
           T   ++  +        +EL L    L   P EI +   +  L    N +  LP E+   
Sbjct: 223 TLPVEIGQLQ-----NLQELYLRNNRLIVFPKEIGQLQNLQMLCSPENRLTALPKEMGQL 277

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-------------------LRQVP 282
            +LQTL L  N++  +P  I   L +L  L+L  NP                   LR+V 
Sbjct: 278 QNLQTLNLVNNRLTVFPKEI-GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 336

Query: 283 SDG-FKDIPM-----LQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDIL 334
            +G ++++ +     L++ +LS       ++ P       +L+ L L        P +I 
Sbjct: 337 ENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEIS 396

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           RL+ L+ L L  N L++IP     L +L  L+L  N +  LP E+G L  +LQ L L  N
Sbjct: 397 RLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLR-NLQKLSLHQN 455

Query: 395 PLR 397
            L+
Sbjct: 456 TLK 458



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 194/429 (45%), Gaps = 48/429 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+L      +I     L  L  S+N L  +P  IG L  L  L L++N++ +
Sbjct: 96  LQELDLRDNQLATFPA-VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTT 154

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
            P  I    +L + ++  N L+ALP E+G+L  L TLDL  NQ      E  QL+ L  L
Sbjct: 155 FPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTL 214

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L +N L+ LP EIG++  L++L L  N L      +        L+ L S  PEN  + 
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLIVFPKEIGQLQN---LQMLCS--PENRLTA 269

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL--------SRNSI 231
                  L  + T        L+L    L+  P EI +   +  L+L         R  I
Sbjct: 270 LPKEMGQLQNLQT--------LNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRI 321

Query: 232 QELPP-------ELSSCASLQTLILSRN----------KIKDWPDA---ILTSLSSLSCL 271
           Q+L P       E++     + L L++           + KD+  +   ++    +L  L
Sbjct: 322 QKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGL 381

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
            L +     +P +    +  L+ L L  N + ++P       L +L+ L L   +L   P
Sbjct: 382 NLYDCGFSTLPKE-ISRLKNLKYLALGLNGLKNIP--SEIGQLKNLEALNLEANELERLP 438

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +I +L+ L+ L L QN+L+  P   + L  L +LDLS N  +  P E+G LE +LQ L 
Sbjct: 439 KEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE-NLQTLN 497

Query: 391 LDGNPLRSI 399
           L  N L ++
Sbjct: 498 LQRNQLTNL 506



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 145/289 (50%), Gaps = 29/289 (10%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS   L+ LP +IG++  L++L L  N L TL         P  +  L     
Sbjct: 48  LDVRVLNLSGEKLTALPKDIGQLKNLQELNLKWNLLTTL---------PKEIGQL----- 93

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSR 228
             E+ +    +++   +AT  +V  +   LE ++LS      +P+EI     +  L L +
Sbjct: 94  --ENLQELDLRDN--QLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYK 149

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +   P E+    +LQ L LS N++   P  I   L +L  L L +N    +P +    
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQDNQFTTLPKE-IGQ 207

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  LQ L+L  N +A+LP       L +LQELYLR  +L   P +I +LQ L++L   +N
Sbjct: 208 LQNLQTLNLQDNQLATLP--VEIGQLQNLQELYLRNNRLIVFPKEIGQLQNLQMLCSPEN 265

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L ++P+    L +L  L+L +N ++  P E+G L+ +LQ L L  NPL
Sbjct: 266 RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQ-NLQDLELLMNPL 313



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 119/222 (53%), Gaps = 8/222 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           ++ EA T ++  +T A +  +  + L+L G  L+A+P +I +   + +L+L  N +  LP
Sbjct: 30  DEVEAGTYRD--LTKALQNPLDVRVLNLSGEKLTALPKDIGQLKNLQELNLKWNLLTTLP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L L  N++  +P A++  L  L  L L  N L  +P++    +  LQ L
Sbjct: 88  KEIGQLENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IGRLQNLQDL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L  N + + P+      L +LQ+L+L   +L   P +I +L+ L+ LDL  N   ++P+
Sbjct: 146 GLYKNKLTTFPK--EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
               L +L  L+L DN ++ LP E+G L+ +LQ L L  N L
Sbjct: 204 EIGQLQNLQTLNLQDNQLATLPVEIGQLQ-NLQELYLRNNRL 244



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 98/234 (41%), Gaps = 37/234 (15%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ I  L  L  L L  N + +IPS I    +L    +  N L  LP E+G+L  L  L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKL 450

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            LH N LK +  E  QL+ L  LDLS N  +  P EIGK+  L+ L L  N L  L    
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNL---- 506

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                PA ++ L++                            +EL L     + +P EI 
Sbjct: 507 -----PAEIEQLKN---------------------------LQELDLNDNQFTVLPKEIG 534

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +  ++  LDL  N +  LP E+    +LQ L L  N+        +  L  L C
Sbjct: 535 KLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKC 588



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 65/128 (50%), Gaps = 2/128 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N L +     I     L +L  S N     P+ IG L  L  L+L +N++ +
Sbjct: 447 LQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTN 505

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E  + +N  + LP E+GKL KL TLDL +NQL     E  QL+ L  L
Sbjct: 506 LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 565

Query: 120 DLSNNSLS 127
            L NN  S
Sbjct: 566 YLQNNQFS 573


>gi|417772084|ref|ZP_12419974.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680513|ref|ZP_13241762.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|418702821|ref|ZP_13263713.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|421115678|ref|ZP_15576078.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|400327871|gb|EJO80111.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409946041|gb|EKN96055.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|410012750|gb|EKO70841.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410767365|gb|EKR38040.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|455669508|gb|EMF34619.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 423

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/366 (33%), Positives = 180/366 (49%), Gaps = 24/366 (6%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 154 SSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
                   P  ++ L+S   L  N +   + +KE        L  T + L L    L  I
Sbjct: 172 --------PTEIEQLKSLKNLDLNNNEFTTVSKE------VMLLETLENLDLRSNKLKTI 217

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P EI +   +  L L+ N +  LP E+    +L+TL L  N+ + +P  IL   + L   
Sbjct: 218 PKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELN 277

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
              N  L + P +    +  L+ L L +N I +LP     + LP LQEL+L   ++   P
Sbjct: 278 LYYNQ-LVEFPKE-VGQLKSLKYLSLYHNQITTLP--VEVTQLPDLQELHLSGNKITILP 333

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +IL+L+ L  L LS N L ++P+    L  L  L+L +N ++ LP E+  L+ +LQ L 
Sbjct: 334 KEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK-NLQRLE 392

Query: 391 LDGNPL 396
           LD NP+
Sbjct: 393 LDSNPI 398



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 132/311 (42%), Gaps = 42/311 (13%)

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LDLS   L  LP +IG++  L+KL L GN              P +L     +L + +  
Sbjct: 46  LDLSFQGLKTLPNKIGQLKNLQKLDLGGN-------------EPTILSKEIWQLKDLQKL 92

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
             +  K  ++          +ELSL    L  +P EI +   + KL+L  N +  LP E+
Sbjct: 93  NLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEI 152

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
               +LQ L L  NK+   P  I   L SL  L L+NN    V S     +  L+ LDL 
Sbjct: 153 GQLQNLQELSLLSNKLISLPTEI-EQLKSLKNLDLNNNEFTTV-SKEVMLLETLENLDLR 210

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ------- 350
            N + ++P+      L  L+ L L   QL   P +I +LQ L+ L+L +N  Q       
Sbjct: 211 SNKLKTIPK--EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEIL 268

Query: 351 ----------------SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
                             P+    L SL  L L  N I+ LP E+  L P LQ L L GN
Sbjct: 269 ELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQL-PDLQELHLSGN 327

Query: 395 PLRSIRRTILD 405
            +  + + IL 
Sbjct: 328 KITILPKEILQ 338



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 12/211 (5%)

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
           V + +LS +G  L  +P++I +   + KLDL  N    L  E+     LQ L L+ NK+ 
Sbjct: 43  VRNLDLSFQG--LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYN-IASLPENPPFSS 312
             P  I   L +L  L L +N L  +P +   FK+   LQ L+L  N +  LP+      
Sbjct: 101 VLPKEI-GQLQNLQELSLHSNELVNLPKEIGQFKN---LQKLNLDNNKLTVLPK--EIGQ 154

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L +LQEL L   +L   PT+I +L+ L+ LDL+ N   ++ +    L +L  LDL  N +
Sbjct: 155 LQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKL 214

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             +P E+  L+ SL+ L L GN L S+ + I
Sbjct: 215 KTIPKEIRQLK-SLKVLMLTGNQLTSLPKEI 244


>gi|418698103|ref|ZP_13259082.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762807|gb|EKR28966.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 595

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 192/415 (46%), Gaps = 26/415 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ +
Sbjct: 165 LQKLWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLAT 223

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+ NN L+  P E+G+L  L  L    N+L     E  QL+ L  L
Sbjct: 224 LPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTL 283

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L NN L+  P EIG++  L+ L L  NPL       +    P     LR  + EN    
Sbjct: 284 NLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLRE-VAENGVYR 342

Query: 180 ASTTKEDLITMATRLSVTSKELS------------LEGMNL-----SAIPSEIWEAGEIT 222
                ++       LS+  K+ S            L G+NL     S +P EI     + 
Sbjct: 343 NLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLK 402

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
            L L  N ++ +P E+    +L+ L L  N+++  P  I   L +L  L L  N L+  P
Sbjct: 403 YLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEI-GQLRNLQKLSLHQNTLKIFP 461

Query: 283 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           ++  + +  LQ LDLS N   + P+      L +LQ L L+R QL     +I +LQ L+ 
Sbjct: 462 AE-IEQLKKLQKLDLSVNQFTTFPK--EIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQE 518

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           LDL+ N    +P+    L  L  LDL +N ++ LP E+G L+ +LQ L L  N L
Sbjct: 519 LDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ-NLQWLYLQNNQL 572



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 189/424 (44%), Gaps = 48/424 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G KLT L    I     L EL    NLL  +P+ IG L  L  LDL  N++ + P+
Sbjct: 53  LNLSGEKLTALPKE-IGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPA 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L    +  N L  LP E+G+L  L  L L+ N+L  +  E  QL+ L  L LS
Sbjct: 112 VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++  L+ L L  N   TL   +        L+ L++          + 
Sbjct: 172 ENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEI------GQLQNLQT---------LNL 216

Query: 183 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
           +   L T+   +      +EL L    L+  P EI +   +  L    N +  LP E+  
Sbjct: 217 SDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQ 276

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-------------------LRQV 281
             +LQTL L  N++  +P  I   L +L  L+L  NP                   LR+V
Sbjct: 277 LQNLQTLNLVNNRLTVFPKEI-GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREV 335

Query: 282 PSDG-FKDIPM-----LQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDI 333
             +G ++++ +     L++ +LS       ++ P       +L+ L L        P +I
Sbjct: 336 AENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI 395

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
            RL+ L+ L L  N L++IP     L +L  L+L  N +  LP E+G L  +LQ L L  
Sbjct: 396 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLR-NLQKLSLHQ 454

Query: 394 NPLR 397
           N L+
Sbjct: 455 NTLK 458



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 196/433 (45%), Gaps = 48/433 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+L      +I     L  L  S+N L  +P  IG L  L  L L++N++ +
Sbjct: 96  LQELDLRDNQLATFPA-VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTT 154

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
            P  I    +L + ++  N L+ALP E+G+L  L TLDL  NQ      E  QL+ L  L
Sbjct: 155 FPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTL 214

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +LS+N L+ LP EIG++  L++L L  N L      +        L+ L S  PEN  + 
Sbjct: 215 NLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQN---LQMLCS--PENRLTA 269

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL--------SRNSI 231
                  L  + T        L+L    L+  P EI +   +  L+L         R  I
Sbjct: 270 LPKEMGQLQNLQT--------LNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRI 321

Query: 232 QELPP-------ELSSCASLQTLILSRN----------KIKDWPDA---ILTSLSSLSCL 271
           Q+L P       E++     + L L++           + KD+  +   ++    +L  L
Sbjct: 322 QKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGL 381

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
            L +     +P +    +  L+ L L  N + ++P       L +L+ L L   +L   P
Sbjct: 382 NLYDCGFSTLPKE-ISRLKNLKYLALGLNGLKNIP--SEIGQLKNLEALNLEANELERLP 438

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +I +L+ L+ L L QN+L+  P   + L  L +LDLS N  +  P E+G LE +LQ L 
Sbjct: 439 KEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE-NLQTLN 497

Query: 391 LDGNPLRSIRRTI 403
           L  N L ++   I
Sbjct: 498 LQRNQLTNLTAEI 510



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 29/289 (10%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS   L+ LP EIG++  L++L L  N L TL         P  +  L     
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTL---------PKEIGQL----- 93

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSR 228
             E+ +    +++   +AT  +V  +   LE ++LS      +P+EI     +  L L +
Sbjct: 94  --ENLQELDLRDN--QLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYK 149

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +   P E+    +LQ L LS N++   P  I   L +L  L L +N    +P +    
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQDNQFTTLPKE-IGQ 207

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  LQ L+LS N +A+LP       L +LQELYLR  +L   P +I +LQ L++L   +N
Sbjct: 208 LQNLQTLNLSDNQLATLP--VEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPEN 265

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L ++P+    L +L  L+L +N ++  P E+G L+ +LQ L L  NPL
Sbjct: 266 RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQ-NLQDLELLMNPL 313



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 121/229 (52%), Gaps = 8/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+ E  T ++  +T A +  +  + L+L G  L+A+P EI +   + +L+L  N +  LP
Sbjct: 30  EEVEPGTYRD--LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L L  N++  +P A++  L  L  L L  N L  +P++    +  LQ L
Sbjct: 88  KEIGQLENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IGRLQNLQDL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L  N + + P+      L +LQ+L+L   +L   P +I +L+ L+ LDL  N   ++P+
Sbjct: 146 GLYKNKLTTFPK--EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L  L+LSDN ++ LP E+G L+ +LQ L L  N L    + I
Sbjct: 204 EIGQLQNLQTLNLSDNQLATLPVEIGQLQ-NLQELYLRNNRLTVFPKEI 251



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 96/234 (41%), Gaps = 37/234 (15%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ I  L  L  L L  N + +IPS I    +L    +  N L  LP E+G+L  L  L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKL 450

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            LH N LK +  E  QL+ L  LDLS N  +  P EIGK+  L+ L L  N L  L + +
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEI 510

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
             G    L                                  +EL L     + +P EI 
Sbjct: 511 --GQLQNL----------------------------------QELDLNDNQFTVLPKEIG 534

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +  ++  LDL  N +  LP E+    +LQ L L  N++       +  L  L C
Sbjct: 535 KLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRKLLPLKC 588



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 7/144 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N L +     I     L +L  S N     P+ IG L  L  L+L +N++ +
Sbjct: 447 LQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTN 505

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           + + I    +L E  + +N  + LP E+GKL KL TLDL +NQL     E  QL+ L  L
Sbjct: 506 LTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 565

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL 143
            L NN LS     + +   +RKLL
Sbjct: 566 YLQNNQLS-----LKEQERIRKLL 584


>gi|418709144|ref|ZP_13269938.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770480|gb|EKR45699.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|456970649|gb|EMG11403.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 407

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 127/377 (33%), Positives = 179/377 (47%), Gaps = 44/377 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  +KL +L    I     L  L +  N L  +P+ IG L  L  L L  N++ ++P 
Sbjct: 56  LDLSRSKLKILPKE-IGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPE 114

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L   ++ NN L+ LP E+GKL  L  L+L  N+L     E  +L+ L  L LS
Sbjct: 115 EIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLS 174

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++ +LRKL L G           N P   L K                
Sbjct: 175 LNRLTILPEEIGQLESLRKLSLGGK----------NKPFTILPKE--------------- 209

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                IT    L    +EL L+   L+ +P EI +   +  LDL +N +  LP E+    
Sbjct: 210 -----ITQLQNL----QELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLK 260

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +L  L LS N++   P  I T L +L  L L+ N     P +       LQ+LDL  N +
Sbjct: 261 NLLVLDLSGNQLTILPKEI-TQLQNLQELNLEYNRFEAFPKE-ITQFQNLQVLDLYQNRL 318

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
            +LPE      L +LQ+L+L R QL   P +I RLQ+L  L L  N L ++PE  K L +
Sbjct: 319 TTLPEE--IGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKN 376

Query: 362 LTELDLSDNNISALPPE 378
           L +L L +N   +LP E
Sbjct: 377 LKKLYLHNN---SLPSE 390



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 174/372 (46%), Gaps = 66/372 (17%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S++ L  +P+ IG L  L  L+   N++ ++P  I    +L E ++ NN L+ LP E+G+
Sbjct: 59  SRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQ 118

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  L L++NQL     E  +L+ L  L+L  N L+ LP EIG++  L++L L+ N L
Sbjct: 119 LQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRL 178

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN-- 207
                               + LPE      S  K                LSL G N  
Sbjct: 179 --------------------TILPEEIGQLESLRK----------------LSLGGKNKP 202

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
            + +P EI +   + +L L  N +  LP E+    +L+ L L +N++   P  I   L +
Sbjct: 203 FTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEI-GQLKN 261

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L  L L  N L  +P    K+I  LQ                     +LQEL L   +  
Sbjct: 262 LLVLDLSGNQLTILP----KEITQLQ---------------------NLQELNLEYNRFE 296

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
             P +I + Q L++LDL QN L ++PE    L +L +L LS N ++ LP E+G L+  L+
Sbjct: 297 AFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQ-KLE 355

Query: 388 ALRLDGNPLRSI 399
           +L LD N L ++
Sbjct: 356 SLGLDHNQLATL 367



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 160/361 (44%), Gaps = 72/361 (19%)

Query: 68  CCSLAEFYMGNNA------LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 120
            CSL +F+   N        + L   L   +++  LDL  ++LK    E  QL+ L +L+
Sbjct: 21  VCSLTQFHAEENYTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILN 80

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
             NN L+ LP EIGK+  L++L L  N L T                    LPE      
Sbjct: 81  SENNQLTTLPKEIGKLQNLQELHLQNNQLTT--------------------LPEE----- 115

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                  I     L V    L L    L+ +P EI +   + +L+L  N +  LP E+  
Sbjct: 116 -------IGQLQNLKV----LHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGR 164

Query: 241 CASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
             +LQ L LS N++   P+ I  L SL  LS L   N P   +P    K+I  LQ     
Sbjct: 165 LQNLQELYLSLNRLTILPEEIGQLESLRKLS-LGGKNKPFTILP----KEITQLQ----- 214

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
                           +LQEL+L+  +L   P +I +LQ LRILDL QN L  +P+    
Sbjct: 215 ----------------NLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 258

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           L +L  LDLS N ++ LP E+  L+ +LQ L L+ N   +  + I       VL   +++
Sbjct: 259 LKNLLVLDLSGNQLTILPKEITQLQ-NLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNR 317

Query: 419 I 419
           +
Sbjct: 318 L 318



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 7/141 (4%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ GN+LT+L    I     L EL    N     P+ I     L  LDL+QNR+ ++P 
Sbjct: 265 LDLSGNQLTILPKE-ITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPE 323

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L + ++  N L+ LP E+G+L KL +L L  NQL     E  QL+ L  L L 
Sbjct: 324 EIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLH 383

Query: 123 NNSLSGLPPEIGKMTTLRKLL 143
           NNS   LP E  K+  +RKLL
Sbjct: 384 NNS---LPSE--KIERIRKLL 399


>gi|421136056|ref|ZP_15596167.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019790|gb|EKO86604.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
          Length = 424

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 183/370 (49%), Gaps = 20/370 (5%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+  L  +P  IG L  L RL LH N++  +P  I    +L   Y+ +N L+ LP E+ +
Sbjct: 55  SRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQ 114

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL SNQL     E  QL+ L +L L +N L+ LP EI ++  L+ L L  N L
Sbjct: 115 LKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQL 174

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
             L   +       LL YL S       +  +T  +D+  +        K L L    L+
Sbjct: 175 TVLPQEIEQLKNLQLL-YLHS-------NRLTTLSKDIEQLQ-----NLKSLDLSNNQLT 221

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P+EI +   +  L LS N     P E+    +L+ L L+ N+I   P+ I   L  L 
Sbjct: 222 TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQ 280

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
            L L +N L  +P +  + +  L+ LDLSYN +  LP+      L +LQ L LR  QL+ 
Sbjct: 281 YLYLSDNQLITLPKE-IEQLKNLKSLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKT 337

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
            P +I +L+ L+ L LS N L ++P+    L +L  L L  N ++ LP E+  L+ +LQ 
Sbjct: 338 LPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQLK-NLQT 396

Query: 389 LRLDGNPLRS 398
           L L+ N   S
Sbjct: 397 LYLNNNQFSS 406



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 174/375 (46%), Gaps = 41/375 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+LTVL    I     L  L    N L  +P  I  L  L  LDL  N++  
Sbjct: 72  LQRLYLHYNQLTVLPQE-IEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTV 130

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L   Y+ +N L+ LP E+ +L  L  LDL SNQL     E  QL+ L +L
Sbjct: 131 LPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLL 190

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +N L+ L  +I ++  L+ L L+ N L TL + +        LK L+S L  +E+  
Sbjct: 191 YLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQ------LKNLKS-LYLSENQF 243

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           A+  KE  I     L V    L L    ++ +P+EI +  ++  L LS N +  LP E+ 
Sbjct: 244 ATFPKE--IGQLQNLKV----LFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIE 297

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L++L LS N++   P  +   L +L  L L NN L+ +P +               
Sbjct: 298 QLKNLKSLDLSYNQLTILPKEV-GQLENLQTLDLRNNQLKTLPKE--------------- 341

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                        L +LQ L+L   QL   P +I +LQ L  L L  N L ++P   + L
Sbjct: 342 ----------IEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQL 391

Query: 360 TSLTELDLSDNNISA 374
            +L  L L++N  S+
Sbjct: 392 KNLQTLYLNNNQFSS 406



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 153/304 (50%), Gaps = 22/304 (7%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR-- 171
           L + VLDLS   L  LP EIG++  L++L L  N L  L   +       LL YLRS   
Sbjct: 47  LEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL-YLRSNRL 105

Query: 172 --LPENEDSEASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGE 220
             LP   +   +    DL   + +L+V  +E         L L    L+ +P+EI +   
Sbjct: 106 TTLPNEIEQLKNLQVLDL--GSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKN 163

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
           +  LDL  N +  LP E+    +LQ L L  N++      I   L +L  L L NN L  
Sbjct: 164 LQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI-EQLQNLKSLDLSNNQLTT 222

Query: 281 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
           +P++  + +  L+ L LS N  A+ P+      L +L+ L+L   Q+   P +I +L++L
Sbjct: 223 LPNE-IEQLKNLKSLYLSENQFATFPK--EIGQLQNLKVLFLNNNQITILPNEIAKLKKL 279

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           + L LS N L ++P+  + L +L  LDLS N ++ LP E+G LE +LQ L L  N L+++
Sbjct: 280 QYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLE-NLQTLDLRNNQLKTL 338

Query: 400 RRTI 403
            + I
Sbjct: 339 PKEI 342


>gi|320162772|gb|EFW39671.1| leucine-rich repeat protein SHOC-2 [Capsaspora owczarzaki ATCC
           30864]
          Length = 490

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 209/421 (49%), Gaps = 22/421 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  NK T +   +I     L++L    N L  +   IG+L+ L  L +  N+I  
Sbjct: 21  LNVLDLRHNKFTEVPP-VIYRMKQLSKLYLRYNKLTWISHDIGNLTGLNILSIRNNKITE 79

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+S+     L    + NN L+ALP+ +GKLS+L +L++  N+L+    E   L +L   
Sbjct: 80  LPASLGNLAGLQILDLMNNCLTALPSSIGKLSRLSSLNVEYNKLERLPEEIGNLVKLKHF 139

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  NSL  LP  I     L +L + GN L  L       PT  L + +     +   + 
Sbjct: 140 GLRYNSLVELPLAIKNCVLLEELNVEGNKLVVL-------PTGILSQLVNVNNLQLSRNN 192

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPEL 238
            +T   DL  + T+L +     +++  ++  IP+ I+ + + + K++L+ NSI  +P ++
Sbjct: 193 FTTIPADLGAL-TKLEI----FNMDNNSVREIPAGIFSSLKLLGKINLNYNSITSIPNDI 247

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
               SL+ + L  NK++  P+  L  L +L  L L NN L  +P    + +  L++LDL 
Sbjct: 248 GDLVSLREINLGSNKLELLPET-LGQLVNLESLVLGNNNLSALPESASRLVK-LRVLDLE 305

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N +  LPE     SL  L+EL+ +  +L   P  +  L  LR+  + +N L  +P    
Sbjct: 306 GNRLTRLPE---IGSLAALEELHAQSNRLTALPQSLGNLHALRLFYVGENQLTELPLSIG 362

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
            L SLT   ++DN +S +P EL      LQ L LD NPL +I   +   G  AV+ YL+ 
Sbjct: 363 QLKSLTSFHVNDNRLSDVPCELANCL-KLQLLNLDDNPLTAIPPNVTSGGPSAVMVYLRK 421

Query: 418 K 418
           K
Sbjct: 422 K 422



 Score = 45.1 bits (105), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 62/125 (49%), Gaps = 11/125 (8%)

Query: 307 NPPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           +P  +SLP       +L  L LR  +  E P  I R++QL  L L  N L  I     NL
Sbjct: 5   HPQLTSLPDELELLKNLNVLDLRHNKFTEVPPVIYRMKQLSKLYLRYNKLTWISHDIGNL 64

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI--LDRGTKAVLKYLK- 416
           T L  L + +N I+ LP  LG L   LQ L L  N L ++  +I  L R +   ++Y K 
Sbjct: 65  TGLNILSIRNNKITELPASLGNL-AGLQILDLMNNCLTALPSSIGKLSRLSSLNVEYNKL 123

Query: 417 DKIPE 421
           +++PE
Sbjct: 124 ERLPE 128


>gi|418690500|ref|ZP_13251616.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|421128085|ref|ZP_15588303.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421133358|ref|ZP_15593506.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|400360685|gb|EJP16657.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|410022366|gb|EKO89143.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410434552|gb|EKP83690.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 423

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/366 (33%), Positives = 180/366 (49%), Gaps = 24/366 (6%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 154 SSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
                   P  ++ L+S   L  N +   + +KE        L  T + L L    L  I
Sbjct: 172 --------PTEIEQLKSLKNLDLNNNEFTTVSKE------VMLLETLENLDLRSNKLKTI 217

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P EI +   +  L L+ N +  LP E+    +L+TL L  N+ + +P  IL   + L   
Sbjct: 218 PKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELN 277

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
              N  L + P +    +  L+ L L +N I +LP     + LP LQEL+L   ++   P
Sbjct: 278 LYYNQ-LVEFPKE-VGQLKSLKYLSLYHNQITTLP--VEVTQLPDLQELHLSGNKITILP 333

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +IL+L+ L  L LS N L ++P+    L  L  L+L +N ++ LP E+  L+ +LQ L 
Sbjct: 334 KEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK-NLQRLE 392

Query: 391 LDGNPL 396
           LD NP+
Sbjct: 393 LDSNPI 398



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 132/311 (42%), Gaps = 42/311 (13%)

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LDLS   L  LP +IG++  L+KL L GN              P +L     +L + +  
Sbjct: 46  LDLSFLGLKTLPNKIGQLKNLQKLDLGGN-------------EPTILSKEIWQLKDLQKL 92

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
             +  K  ++          +ELSL    L  +P EI +   + KL+L  N +  LP E+
Sbjct: 93  NLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEI 152

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
               +LQ L L  NK+   P  I   L SL  L L+NN    V S     +  L+ LDL 
Sbjct: 153 GQLQNLQELSLLSNKLISLPTEI-EQLKSLKNLDLNNNEFTTV-SKEVMLLETLENLDLR 210

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ------- 350
            N + ++P+      L  L+ L L   QL   P +I +LQ L+ L+L +N  Q       
Sbjct: 211 SNKLKTIPK--EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEIL 268

Query: 351 ----------------SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
                             P+    L SL  L L  N I+ LP E+  L P LQ L L GN
Sbjct: 269 ELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQL-PDLQELHLSGN 327

Query: 395 PLRSIRRTILD 405
            +  + + IL 
Sbjct: 328 KITILPKEILQ 338



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 106/208 (50%), Gaps = 10/208 (4%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           + L L  + L  +P++I +   + KLDL  N    L  E+     LQ L L+ NK+   P
Sbjct: 44  RNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLP 103

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
             I   L +L  L L +N L  +P +   FK+   LQ L+L  N +  LP+      L +
Sbjct: 104 KEI-GQLQNLQELSLHSNELVNLPKEIGQFKN---LQKLNLDNNKLTVLPK--EIGQLQN 157

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           LQEL L   +L   PT+I +L+ L+ LDL+ N   ++ +    L +L  LDL  N +  +
Sbjct: 158 LQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTI 217

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P E+  L+ SL+ L L GN L S+ + I
Sbjct: 218 PKEIRQLK-SLKVLMLTGNQLTSLPKEI 244


>gi|456824532|gb|EMF72958.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 423

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 121/366 (33%), Positives = 180/366 (49%), Gaps = 24/366 (6%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 154 SSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
                   P  ++ L+S   L  N +   + +KE        L  T + L L    L  I
Sbjct: 172 --------PTEIEQLKSLKNLDLNHNELTTVSKE------VMLLETLENLDLRSNKLKTI 217

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P EI +   +  L L+ N +  LP E+    +L+TL L  N+ + +P  IL   + L   
Sbjct: 218 PKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELN 277

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
              N  L + P +    +  L+ L L +N I +LP     + LP LQEL+L   ++   P
Sbjct: 278 LYYNQ-LVEFPKE-VGQLKSLKYLSLYHNQITTLP--VEVTQLPDLQELHLSGNKITILP 333

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +IL+L+ L  L LS N L ++P+    L  L  L+L +N ++ LP E+  L+ +LQ L 
Sbjct: 334 KEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK-NLQRLE 392

Query: 391 LDGNPL 396
           LD NP+
Sbjct: 393 LDSNPI 398



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 153/328 (46%), Gaps = 43/328 (13%)

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
            L  LP ++G+L  L  LDL  N+      E  QL+ L  L+L+NN L+ LP EIG++  
Sbjct: 52  GLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQN 111

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L++L L  N        LVN P                  E    K              
Sbjct: 112 LQELSLHSN-------ELVNLP-----------------KEIGQFK------------NL 135

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L+L+   L+ +P EI +   + +L L  N +  LP E+    SL+ L L+ N++    
Sbjct: 136 QKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVS 195

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
             ++  L +L  L L +N L+ +P +  + +  L++L L+ N + SLP+      L +L+
Sbjct: 196 KEVML-LETLENLDLRSNKLKTIPKE-IRQLKSLKVLMLTGNQLTSLPKE--IEQLQNLK 251

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L L   + +  P +IL L+ L  L+L  N L   P+    L SL  L L  N I+ LP 
Sbjct: 252 TLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPV 311

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTILD 405
           E+  L P LQ L L GN +  + + IL 
Sbjct: 312 EVTQL-PDLQELHLSGNKITILPKEILQ 338



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 12/207 (5%)

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           +LS +G  L  +P++I +   + KLDL  N    L  E+     LQ L L+ NK+   P 
Sbjct: 47  DLSFQG--LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPK 104

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
            I   L +L  L L +N L  +P +   FK+   LQ L+L  N +  LP+      L +L
Sbjct: 105 EI-GQLQNLQELSLHSNELVNLPKEIGQFKN---LQKLNLDNNKLTVLPK--EIGQLQNL 158

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           QEL L   +L   PT+I +L+ L+ LDL+ N L ++ +    L +L  LDL  N +  +P
Sbjct: 159 QELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIP 218

Query: 377 PELGLLEPSLQALRLDGNPLRSIRRTI 403
            E+  L+ SL+ L L GN L S+ + I
Sbjct: 219 KEIRQLK-SLKVLMLTGNQLTSLPKEI 244


>gi|291234605|ref|XP_002737242.1| PREDICTED: leucine rich repeat containing 7-like [Saccoglossus
           kowalevskii]
          Length = 679

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 199/407 (48%), Gaps = 45/407 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +++ T LT L   +N +  +P+ IG+L+ LI  D+  N +  +PS I  C  L+   + +
Sbjct: 171 LSNLTNLTMLSLRENKIRKLPQGIGNLTHLITFDVSHNHLEHLPSEIGNCEQLSSLDLQH 230

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPE-IGKM 136
           N L  LP  LG L +L  L L  N+L+      C  L +   ++ NN++S LP   +  +
Sbjct: 231 NELLDLPDSLGNLRQLSRLGLRYNRLQAIPKSLCNCLDMEEFNVENNNISSLPEGLLSSL 290

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L  L L+ N      S  + GPT                             AT  S+
Sbjct: 291 VNLTSLCLSRN---NFNSYPIGGPT---------------------------QFATVYSI 320

Query: 197 TSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
                ++E  +++ IP  I+  A  +TKL++  N +  LP ++ S  S+  L L  N++ 
Sbjct: 321 -----NMEHNHITKIPFGIFTRAKYLTKLNMKENQLTALPLDVGSWMSMVELNLGTNQLS 375

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             P+ I  +L+SL  L L NN L+++P  G  ++  +++LDL  N + SLP    +  L 
Sbjct: 376 KLPEDI-QALTSLEVLILSNNLLKKLPR-GIGNLQKMRVLDLEENKLESLPSEIAY--LC 431

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NIS 373
            LQ L L+  QL   P +I  L  L+ L + +N+L S+PE    L +L +L L+DN N+ 
Sbjct: 432 SLQRLVLQSNQLSTLPRNIGHLGTLQYLSVGENNLTSLPEEIGTLENLEQLYLNDNPNLH 491

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            LP EL L   SLQ + ++  PL  + + ++  G   V++YLK   P
Sbjct: 492 NLPFELALCS-SLQIMSIENCPLSQLPQEVVAGGPSLVIQYLKMHGP 537



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 194/398 (48%), Gaps = 19/398 (4%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           SK+ ++ +P +I  L++L+ L L+ NR+  +P+ I    +L +  +  N+L++LP  L +
Sbjct: 68  SKSCISVLPSSIKDLTQLVELYLYGNRLQYLPNEIGYLSNLQKLALSENSLTSLPVSLER 127

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  +  LDL  N+LKE      +L  L+ L L  N +S +  E+  +T L  L L  N +
Sbjct: 128 LKVIKVLDLRHNKLKEIPEVVYRLTSLTTLFLRFNRISDVDEELSNLTNLTMLSLRENKI 187

Query: 150 RTLRSSLVN-------GPTPALLKYLRSRLPENED-SEASTTKEDLITMATRLSVTSK-- 199
           R L   + N         +   L++L S +   E  S       +L+ +   L    +  
Sbjct: 188 RKLPQGIGNLTHLITFDVSHNHLEHLPSEIGNCEQLSSLDLQHNELLDLPDSLGNLRQLS 247

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWP 258
            L L    L AIP  +    ++ + ++  N+I  LP   LSS  +L +L LSRN    +P
Sbjct: 248 RLGLRYNRLQAIPKSLCNCLDMEEFNVENNNISSLPEGLLSSLVNLTSLCLSRNNFNSYP 307

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
               T  +++  + +++N + ++P   F     L  L++  N + +LP +    S   + 
Sbjct: 308 IGGPTQFATVYSINMEHNHITKIPFGIFTRAKYLTKLNMKENQLTALPLD--VGSWMSMV 365

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           EL L   QL + P DI  L  L +L LS N L+ +P G  NL  +  LDL +N + +LP 
Sbjct: 366 ELNLGTNQLSKLPEDIQALTSLEVLILSNNLLKKLPRGIGNLQKMRVLDLEENKLESLPS 425

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           E+  L  SLQ L L  N L ++ R I   GT   L+YL
Sbjct: 426 EIAYL-CSLQRLVLQSNQLSTLPRNIGHLGT---LQYL 459



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 132/300 (44%), Gaps = 45/300 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS---LSRLIRLDLHQNR 57
           M + +VE N ++ L   L++S   LT L  S+N  N  P  IG     + +  +++  N 
Sbjct: 269 MEEFNVENNNISSLPEGLLSSLVNLTSLCLSRNNFNSYP--IGGPTQFATVYSINMEHNH 326

Query: 58  ILSIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-R 115
           I  IP  I +    L +  M  N L+ALP ++G    +  L+L +NQL +   +   L  
Sbjct: 327 ITKIPFGIFTRAKYLTKLNMKENQLTALPLDVGSWMSMVELNLGTNQLSKLPEDIQALTS 386

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L VL LSNN L  LP  IG +  +R L L  N L +L         P+ + YL S     
Sbjct: 387 LEVLILSNNLLKKLPRGIGNLQKMRVLDLEENKLESL---------PSEIAYLCSL---- 433

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                  + L L+   LS +P  I   G +  L +  N++  LP
Sbjct: 434 -----------------------QRLVLQSNQLSTLPRNIGHLGTLQYLSVGENNLTSLP 470

Query: 236 PELSSCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
            E+ +  +L+ L L+ N  + + P   L   SSL  + ++N PL Q+P +     P L I
Sbjct: 471 EEIGTLENLEQLYLNDNPNLHNLPFE-LALCSSLQIMSIENCPLSQLPQEVVAGGPSLVI 529



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 3/186 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M +L++  N+L+ L  + I + T L  LI S NLL  +P  IG+L ++  LDL +N++ S
Sbjct: 364 MVELNLGTNQLSKLPED-IQALTSLEVLILSNNLLKKLPRGIGNLQKMRVLDLEENKLES 422

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +PS I+  CSL    + +N LS LP  +G L  L  L +  N L     E   L  L  L
Sbjct: 423 LPSEIAYLCSLQRLVLQSNQLSTLPRNIGHLGTLQYLSVGENNLTSLPEEIGTLENLEQL 482

Query: 120 DLSNN-SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
            L++N +L  LP E+   ++L+ + +   PL  L   +V G    +++YL+   P    +
Sbjct: 483 YLNDNPNLHNLPFELALCSSLQIMSIENCPLSQLPQEVVAGGPSLVIQYLKMHGPYRSMT 542

Query: 179 EASTTK 184
            + T+K
Sbjct: 543 ISFTSK 548


>gi|198451363|ref|XP_002137290.1| GA27118 [Drosophila pseudoobscura pseudoobscura]
 gi|261277894|sp|B5DX45.1|SUR8_DROPS RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|198131455|gb|EDY67848.1| GA27118 [Drosophila pseudoobscura pseudoobscura]
          Length = 629

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 182/396 (45%), Gaps = 51/396 (12%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-- 107
           RLDL ++ I  IPS++  C  L E Y+ +N +  LPAE+G L  L  L L+ N L     
Sbjct: 152 RLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPAEIGCLVNLRNLALNENSLTSLPE 211

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 167
            ++ C+ +L VLDL +N L+ +PP I ++ TL  L L  N +  +  +L       L+  
Sbjct: 212 SLQNCK-QLKVLDLRHNKLAEIPPVIYRLRTLTTLYLRFNRITAVADNL-----RQLVNL 265

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL------EGMNLSA----------I 211
               L EN+  E  +    L+ + T L V+   L          +NLSA          I
Sbjct: 266 TMLSLRENKIRELGSAIGALVNLTT-LDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDI 324

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P  I     + +L L  N +  +P  L +C S+    +  N +   PD +L SLS L+ +
Sbjct: 325 PDSIGNLKSLVRLGLRYNRLSSVPATLKNCKSMDEFNVEGNGMTQLPDGMLASLSGLTTI 384

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP----------------ENPPFSSLP 314
            L  N     P+ G      +  ++L +N I  +P                EN   ++LP
Sbjct: 385 TLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENM-LTALP 443

Query: 315 -------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                  ++ EL L    L++ P DI+ LQ L IL LS N L+ IP    N+  L  LDL
Sbjct: 444 LDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNMRKLRILDL 503

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            +N I  LP E+GLL   LQ L L  N +  + R+I
Sbjct: 504 EENRIEVLPHEIGLLH-ELQRLILQTNQITMLPRSI 538



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 178/407 (43%), Gaps = 68/407 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I +   LT L  S N L  +PE IG+   L  LDL  N +L IP SI    SL    +  
Sbjct: 282 IGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGLRY 341

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKM 136
           N LS++PA L     +   ++  N + +    + A    L+ + LS N  +  P      
Sbjct: 342 NRLSSVPATLKNCKSMDEFNVEGNGMTQLPDGMLASLSGLTTITLSRNQFTSYP------ 395

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEASTTKEDLITMATRLS 195
                   TG P +      +N      L++ R  ++P    S A           T+L+
Sbjct: 396 --------TGGPAQFTNVYSIN------LEHNRIDKIPYGIFSRAKG--------LTKLN 433

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
           +       E M L+A+P +I     + +L+L+ N++Q+LP ++ +  +L+ LILS N +K
Sbjct: 434 MK------ENM-LTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLK 486

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             P+ I                          ++  L+ILDL  N I  LP       L 
Sbjct: 487 KIPNTI-------------------------GNMRKLRILDLEENRIEVLPHE--IGLLH 519

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NIS 373
            LQ L L+  Q+   P  I  L  L  L +S+N+LQ +PE   +L  L  L ++ N  + 
Sbjct: 520 ELQRLILQTNQITMLPRSIGHLSNLTHLSVSENNLQFLPEEIGSLEGLENLYINQNPGLE 579

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            LP EL L + +L+ L +D  PL +I   I   G   VL++LK   P
Sbjct: 580 KLPFELALCQ-NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSP 625



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E N++  +   + +    LT+L   +N+L  +P  IG+   ++ L+L  N +  +P 
Sbjct: 408 INLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPD 467

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    + NN L  +P  +G + KL  LDL  N+++    E   L  L  L L 
Sbjct: 468 DIMNLQNLEILILSNNMLKKIPNTIGNMRKLRILDLEENRIEVLPHEIGLLHELQRLILQ 527

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
            N ++ LP  IG ++ L  L ++ N L+ L
Sbjct: 528 TNQITMLPRSIGHLSNLTHLSVSENNLQFL 557



 Score = 41.2 bits (95), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%)

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           R + ++ LDLS++S+  IP   K    LTEL L  N I  LP E+G L  +L+ L L+ N
Sbjct: 146 RDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPAEIGCL-VNLRNLALNEN 204

Query: 395 PLRSIRRTILDRGTKAVLKYLKDKIPE 421
            L S+  ++ +     VL    +K+ E
Sbjct: 205 SLTSLPESLQNCKQLKVLDLRHNKLAE 231


>gi|417766182|ref|ZP_12414136.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400351636|gb|EJP03855.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 423

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 121/366 (33%), Positives = 180/366 (49%), Gaps = 24/366 (6%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 154 SSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
                   P  ++ L+S   L  N +   + +KE        L  T + L L    L  I
Sbjct: 172 --------PTEIEQLKSLKNLDLNHNELTTVSKE------VMLLETLENLDLRSNKLKTI 217

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P EI +   +  L L+ N +  LP E+    +L+TL L  N+ + +P  IL   + L   
Sbjct: 218 PKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELN 277

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
              N  L + P +    +  L+ L L +N I +LP     + LP LQEL+L   ++   P
Sbjct: 278 LYYNQ-LVEFPKE-VGQLKSLKYLSLYHNQITTLP--VEVTQLPDLQELHLSGNKITILP 333

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +IL+L+ L  L LS N L ++P+    L  L  L+L +N ++ LP E+  L+ +LQ L 
Sbjct: 334 KEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK-NLQRLE 392

Query: 391 LDGNPL 396
           LD NP+
Sbjct: 393 LDSNPI 398



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 153/328 (46%), Gaps = 43/328 (13%)

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
            L  LP ++G+L  L  LDL  N+      E  QL+ L  L+L+NN L+ LP EIG++  
Sbjct: 52  GLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQN 111

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L++L L  N        LVN P                  E    K              
Sbjct: 112 LQELSLHSN-------ELVNLP-----------------KEIGQFK------------NL 135

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L+L+   L+ +P EI +   + +L L  N +  LP E+    SL+ L L+ N++    
Sbjct: 136 QKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVS 195

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
             ++  L +L  L L +N L+ +P +  + +  L++L L+ N + SLP+      L +L+
Sbjct: 196 KEVML-LETLENLDLRSNKLKTIPKE-IRQLKSLKVLMLTGNQLTSLPKE--IEQLQNLK 251

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L L   + +  P +IL L+ L  L+L  N L   P+    L SL  L L  N I+ LP 
Sbjct: 252 TLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPV 311

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTILD 405
           E+  L P LQ L L GN +  + + IL 
Sbjct: 312 EVTQL-PDLQELHLSGNKITILPKEILQ 338



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 110/211 (52%), Gaps = 12/211 (5%)

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
           V + +LS +G  L  +P++I +   + KLDL  N    L  E+     LQ L L+ NK+ 
Sbjct: 43  VRNLDLSFQG--LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYN-IASLPENPPFSS 312
             P  I   L +L  L L +N L  +P +   FK+   LQ L+L  N +  LP+      
Sbjct: 101 VLPKEI-GQLQNLQELSLHSNELVNLPKEIGQFKN---LQKLNLDNNKLTVLPK--EIGQ 154

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L +LQEL L   +L   PT+I +L+ L+ LDL+ N L ++ +    L +L  LDL  N +
Sbjct: 155 LQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKL 214

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             +P E+  L+ SL+ L L GN L S+ + I
Sbjct: 215 KTIPKEIRQLK-SLKVLMLTGNQLTSLPKEI 244


>gi|410451738|ref|ZP_11305740.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014504|gb|EKO76634.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 438

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 189/386 (48%), Gaps = 51/386 (13%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P+ IG L  L  L+L  N++ ++P  I     L +  +G N ++ LP E+G+L  L
Sbjct: 49  LTALPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNKITVLPNEIGQLQSL 108

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLS-NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
             L+L  NQL     E  +L+ L  L L  N+ L  LP EIGK+  L+            
Sbjct: 109 LDLNLSFNQLTTIPKEIGELQHLQRLFLGFNHQLIALPKEIGKLQNLQ------------ 156

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSA 210
                                     E  +++  LIT+   +      + L L    L+ 
Sbjct: 157 --------------------------EMDSSRNQLITLPKEIGELQHLQRLFLNFNQLTT 190

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +P EI     + +LDL +N +  +P E+    SLQ L LS N+++  P  I   L +L  
Sbjct: 191 VPQEIGNLQNLQRLDLDKNQLTTIPKEIGQLQSLQGLTLSFNQLRTIPKEI-GKLQNLQG 249

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 329
           L L +N L  +P +   ++  L++L L +N +A++P+     +L  LQ L L R  L   
Sbjct: 250 LTLTSNGLATIPKE-IGNLQNLKVLYLDHNKLATIPQE--IGNLQSLQVLTLDRNLLAPL 306

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
           P +I +LQ L+ L L+ N+L ++P+   NL +L EL+L+ N ++ LP E+G L+ +LQ L
Sbjct: 307 PKEIGKLQNLQRLALTVNALTTLPKEIGNLQNLKELNLTSNRLTTLPKEIGKLQ-NLQEL 365

Query: 390 RLDGNPLRSIRRTILDRGTKAVLKYL 415
            LD N L+++ + I   G    L+YL
Sbjct: 366 HLDYNQLKTLPKEI---GKLQSLEYL 388



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 121/373 (32%), Positives = 175/373 (46%), Gaps = 44/373 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN-RIL 59
           + KLD+  NK+TVL N  I     L +L  S N L  +P+ IG L  L RL L  N +++
Sbjct: 85  LQKLDLGFNKITVLPNE-IGQLQSLLDLNLSFNQLTTIPKEIGELQHLQRLFLGFNHQLI 143

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 118
           ++P  I    +L E     N L  LP E+G+L  L  L L+ NQL     E   L+ L  
Sbjct: 144 ALPKEIGKLQNLQEMDSSRNQLITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQNLQR 203

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LDL  N L+ +P EIG++ +L+ L L+ N LRT+   +        L+ L+         
Sbjct: 204 LDLDKNQLTTIPKEIGQLQSLQGLTLSFNQLRTIPKEI------GKLQNLQG-------- 249

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                                 L+L    L+ IP EI     +  L L  N +  +P E+
Sbjct: 250 ----------------------LTLTSNGLATIPKEIGNLQNLKVLYLDHNKLATIPQEI 287

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
            +  SLQ L L RN +   P  I   L +L  L L  N L  +P +   ++  L+ L+L+
Sbjct: 288 GNLQSLQVLTLDRNLLAPLPKEI-GKLQNLQRLALTVNALTTLPKE-IGNLQNLKELNLT 345

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + +LP+      L +LQEL+L   QL+  P +I +LQ L  L+L+ N L S PE   
Sbjct: 346 SNRLTTLPKE--IGKLQNLQELHLDYNQLKTLPKEIGKLQSLEYLNLNGNPLTSFPEEIG 403

Query: 358 NLTSLTELDLSDN 370
            L +L  L L  N
Sbjct: 404 KLQNLKVLSLVGN 416



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/240 (35%), Positives = 120/240 (50%), Gaps = 16/240 (6%)

Query: 175 NEDSEASTTKEDLITMATRLSVTSKEL----SLEGMNL-----SAIPSEIWEAGEITKLD 225
           NE  +  T    L   A +L+   KE+    +L+G+NL     + +P EI E   + KLD
Sbjct: 30  NEALQNPTQVRVLYLNAKKLTALPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQHLQKLD 89

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD-NNPLRQVPSD 284
           L  N I  LP E+    SL  L LS N++   P  I   L  L  L L  N+ L  +P +
Sbjct: 90  LGFNKITVLPNEIGQLQSLLDLNLSFNQLTTIPKEI-GELQHLQRLFLGFNHQLIALPKE 148

Query: 285 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
               +  LQ +D S N + +LP+      L HLQ L+L   QL   P +I  LQ L+ LD
Sbjct: 149 -IGKLQNLQEMDSSRNQLITLPKE--IGELQHLQRLFLNFNQLTTVPQEIGNLQNLQRLD 205

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L +N L +IP+    L SL  L LS N +  +P E+G L+ +LQ L L  N L +I + I
Sbjct: 206 LDKNQLTTIPKEIGQLQSLQGLTLSFNQLRTIPKEIGKLQ-NLQGLTLTSNGLATIPKEI 264



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 82/153 (53%), Gaps = 4/153 (2%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ NKL  +    I +   L  L   +NLL  +P+ IG L  L RL L  N + ++P 
Sbjct: 273 LYLDHNKLATIPQE-IGNLQSLQVLTLDRNLLAPLPKEIGKLQNLQRLALTVNALTTLPK 331

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  + +N L+ LP E+GKL  L  L L  NQLK    E  +L+ L  L+L+
Sbjct: 332 EIGNLQNLKELNLTSNRLTTLPKEIGKLQNLQELHLDYNQLKTLPKEIGKLQSLEYLNLN 391

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
            N L+  P EIGK+  L+ L L GNP  +LRS 
Sbjct: 392 GNPLTSFPEEIGKLQNLKVLSLVGNP--SLRSQ 422


>gi|421087062|ref|ZP_15547903.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421104771|ref|ZP_15565364.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410365081|gb|EKP20476.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410430171|gb|EKP74541.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 405

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 124/369 (33%), Positives = 175/369 (47%), Gaps = 41/369 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  +KL +L    I     L  L +  N L  +P+ IG L  L  L L  N++ ++P 
Sbjct: 54  LDLSRSKLKILPKE-IGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPE 112

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L   ++ NN L+ LP E+GKL  L  L+L  N+L     E  +L+ L  L LS
Sbjct: 113 EIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLS 172

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++ +LRKL L G           N P   L K                
Sbjct: 173 LNRLTILPEEIGQLESLRKLSLGGK----------NKPFTILPKE--------------- 207

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                IT    L    +EL L+   L+ +P EI +   +  LDL +N +  LP E+    
Sbjct: 208 -----ITQLQNL----QELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLK 258

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +L  L LS N++   P  I T L +L  L L+ N     P +       LQ+LDL  N +
Sbjct: 259 NLLVLDLSGNQLTILPKEI-TQLQNLQELNLEYNRFEAFPKE-ITQFQNLQVLDLYQNRL 316

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
            +LPE      L +LQ+L+L R QL   P +I RLQ+L  L L  N L ++PE  K L +
Sbjct: 317 TTLPE--EIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKN 374

Query: 362 LTELDLSDN 370
           L +L L +N
Sbjct: 375 LKKLYLHNN 383



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 179/393 (45%), Gaps = 76/393 (19%)

Query: 20  ASWTMLTELIA----------SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 69
            S+T LTE +           S++ L  +P+ IG L  L  L+   N++ ++P  I    
Sbjct: 36  GSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQ 95

Query: 70  SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 128
           +L E ++ NN L+ LP E+G+L  L  L L++NQL     E  +L+ L  L+L  N L+ 
Sbjct: 96  NLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNI 155

Query: 129 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 188
           LP EIG++  L++L L+ N L                    + LPE      S  K    
Sbjct: 156 LPKEIGRLQNLQELYLSLNRL--------------------TILPEEIGQLESLRK---- 191

Query: 189 TMATRLSVTSKELSLEGMN--LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
                       LSL G N   + +P EI +   + +L L  N +  LP E+    +L+ 
Sbjct: 192 ------------LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRI 239

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 306
           L L +N++   P  I   L +L  L L  N L  +P +                      
Sbjct: 240 LDLYQNRLTILPKEI-GQLKNLLVLDLSGNQLTILPKE---------------------- 276

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
               + L +LQEL L   +    P +I + Q L++LDL QN L ++PE    L +L +L 
Sbjct: 277 ---ITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLH 333

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LS N ++ LP E+G L+  L++L LD N L ++
Sbjct: 334 LSRNQLTTLPKEIGRLQ-KLESLGLDHNQLATL 365



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 159/358 (44%), Gaps = 69/358 (19%)

Query: 68  CCSLAEFYMGNN---ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 123
            CSL +F+   N   + + L   L   +++  LDL  ++LK    E  QL+ L +L+  N
Sbjct: 22  VCSLTQFHAEENHKGSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSEN 81

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N L+ LP EIGK+  L++L L  N L T                    LPE         
Sbjct: 82  NQLTTLPKEIGKLQNLQELHLQNNQLTT--------------------LPEE-------- 113

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
               I     L V    L L    L+ +P EI +   + +L+L  N +  LP E+    +
Sbjct: 114 ----IGQLQNLKV----LHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQN 165

Query: 244 LQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
           LQ L LS N++   P+ I  L SL  LS L   N P   +P +                 
Sbjct: 166 LQELYLSLNRLTILPEEIGQLESLRKLS-LGGKNKPFTILPKE----------------- 207

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
                    + L +LQEL+L+  +L   P +I +LQ LRILDL QN L  +P+    L +
Sbjct: 208 --------ITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKN 259

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           L  LDLS N ++ LP E+  L+ +LQ L L+ N   +  + I       VL   ++++
Sbjct: 260 LLVLDLSGNQLTILPKEITQLQ-NLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRL 316



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 23/165 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ GN+LT+L    I     L EL    N     P+ I     L  LDL+QNR+ ++P 
Sbjct: 263 LDLSGNQLTILPKE-ITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPE 321

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I    +L + ++  N L+ LP E+G+L KL +L L  NQL                   
Sbjct: 322 EIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL------------------- 362

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
              + LP EI ++  L+KL L  NPL + +   +    P  + Y 
Sbjct: 363 ---ATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRKLLPQCIIYF 404


>gi|456969346|gb|EMG10380.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 598

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 203/439 (46%), Gaps = 30/439 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ +
Sbjct: 165 LQKLWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLAT 223

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L + Y+ NN L+  P E+G+L  L  L    N+L     E  QL+ L  L
Sbjct: 224 LPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTL 283

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L NN L+  P EIG++  L+ L L  NPL       +    P     LR  + EN    
Sbjct: 284 NLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLRE-VAENGVYR 342

Query: 180 ASTTKEDLITMATRLSVTSKELS------------LEGMNL-----SAIPSEIWEAGEIT 222
                ++       LS+  K+ S            L G+NL     S +P EI     + 
Sbjct: 343 NLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLK 402

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
            L L  N ++ +P E+    +L+ L L  N+++  P  I   L +L  L L  N L+  P
Sbjct: 403 YLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEI-GQLRNLQKLSLHQNTLKIFP 461

Query: 283 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           ++  + +  LQ LDLS N   + P+      L +LQ L L+R QL     +I +LQ L+ 
Sbjct: 462 AE-IEQLKKLQKLDLSVNQFTTFPK--EIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQE 518

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL----R 397
           LDL+ N    +P+    L  L  LDL +N ++ LP E+G L+ +LQ L L  N L    +
Sbjct: 519 LDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ-NLQWLYLQNNQLSLKEQ 577

Query: 398 SIRRTILDRGTKAVLKYLK 416
              R +L    K +LK+++
Sbjct: 578 ERIRKLLPLKCKIILKFIR 596



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 190/423 (44%), Gaps = 46/423 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G KLT L    I     L EL    NLL  +P+ IG L  L  LDL  N++ + P+
Sbjct: 53  LNLSGEKLTALPKE-IGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPA 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L    +  N L  LP E+G+L  L  L L+ N+L  +  E  QL+ L  L LS
Sbjct: 112 VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEAS 181
            N L+ LP EIG++  L+ L L  N    L         P  +  L++    N  D++ +
Sbjct: 172 ENRLTALPKEIGQLKNLQTLDLQDNQFTIL---------PKEIGQLQNLQTLNLSDNQLA 222

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
           T   ++  +        ++L L    L+  P EI +   +  L    N +  LP E+   
Sbjct: 223 TLPVEIGQLQ-----NLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQL 277

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-------------------LRQVP 282
            +LQTL L  N++  +P  I   L +L  L+L  NP                   LR+V 
Sbjct: 278 QNLQTLNLVNNRLTVFPKEI-GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 336

Query: 283 SDG-FKDIPM-----LQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDIL 334
            +G ++++ +     L++ +LS       ++ P       +L+ L L        P +I 
Sbjct: 337 ENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEIS 396

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           RL+ L+ L L  N L++IP     L +L  L+L  N +  LP E+G L  +LQ L L  N
Sbjct: 397 RLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLR-NLQKLSLHQN 455

Query: 395 PLR 397
            L+
Sbjct: 456 TLK 458



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 196/433 (45%), Gaps = 48/433 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+L      +I     L  L  S+N L  +P  IG L  L  L L++N++ +
Sbjct: 96  LQELDLRDNQLATFPA-VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTT 154

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
            P  I    +L + ++  N L+ALP E+G+L  L TLDL  NQ      E  QL+ L  L
Sbjct: 155 FPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTL 214

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +LS+N L+ LP EIG++  L+KL L  N L      +        L+ L S  PEN  + 
Sbjct: 215 NLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQN---LQMLCS--PENRLTA 269

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL--------SRNSI 231
                  L  + T        L+L    L+  P EI +   +  L+L         R  I
Sbjct: 270 LPKEMGQLQNLQT--------LNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRI 321

Query: 232 QELPP-------ELSSCASLQTLILSRN----------KIKDWPDA---ILTSLSSLSCL 271
           Q+L P       E++     + L L++           + KD+  +   ++    +L  L
Sbjct: 322 QKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGL 381

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
            L +     +P +    +  L+ L L  N + ++P       L +L+ L L   +L   P
Sbjct: 382 NLYDCGFSTLPKE-ISRLKNLKYLALGLNGLKNIP--SEIGQLKNLEALNLEANELERLP 438

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +I +L+ L+ L L QN+L+  P   + L  L +LDLS N  +  P E+G LE +LQ L 
Sbjct: 439 KEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE-NLQTLN 497

Query: 391 LDGNPLRSIRRTI 403
           L  N L ++   I
Sbjct: 498 LQRNQLTNLTAEI 510



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 146/289 (50%), Gaps = 29/289 (10%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS   L+ LP EIG++  L++L L  N L TL         P  +  L     
Sbjct: 48  LNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTL---------PKEIGQL----- 93

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSR 228
             E+ +    +++   +AT  +V  +   LE ++LS      +P+EI     +  L L +
Sbjct: 94  --ENLQELDLRDN--QLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYK 149

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +   P E+    +LQ L LS N++   P  I   L +L  L L +N    +P +    
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQDNQFTILPKE-IGQ 207

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  LQ L+LS N +A+LP       L +LQ+LYLR  +L   P +I +LQ L++L   +N
Sbjct: 208 LQNLQTLNLSDNQLATLP--VEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPEN 265

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L ++P+    L +L  L+L +N ++  P E+G L+ +LQ L L  NPL
Sbjct: 266 RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQ-NLQDLELLMNPL 313



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 118/228 (51%), Gaps = 7/228 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
           D +   T  DL T A +  +  + L+L G  L+A+P EI +   + +L+L  N +  LP 
Sbjct: 30  DEDEPGTYMDL-TKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPK 88

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    +LQ L L  N++  +P A++  L  L  L L  N L  +P++    +  LQ L 
Sbjct: 89  EIGQLENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IGRLQNLQDLG 146

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N + + P+      L +LQ+L+L   +L   P +I +L+ L+ LDL  N    +P+ 
Sbjct: 147 LYKNKLTTFPK--EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKE 204

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L +L  L+LSDN ++ LP E+G L+ +LQ L L  N L    + I
Sbjct: 205 IGQLQNLQTLNLSDNQLATLPVEIGQLQ-NLQKLYLRNNRLTVFPKEI 251


>gi|417783613|ref|ZP_12431331.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409953237|gb|EKO07738.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 595

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 193/415 (46%), Gaps = 26/415 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ +
Sbjct: 165 LQKLWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLAT 223

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+ NN L+  P E+G+L  L  L    N+L     E  QL+ L  L
Sbjct: 224 LPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTL 283

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L NN L+  P EIG++  L+ L L  NPL       +    P     LR  + EN    
Sbjct: 284 NLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSSLDLRE-VAENGVYR 342

Query: 180 ASTTKEDLITMATRLSVTSKELS------------LEGMNL-----SAIPSEIWEAGEIT 222
                ++       LS+  K+ S            L G+NL     S +P EI     + 
Sbjct: 343 NLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISLLKNLK 402

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
            L L  N ++++P E+    +L+ L L  N+++  P  I   L +L  L L  N L+  P
Sbjct: 403 YLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEI-GQLRNLQKLSLHQNTLKIFP 461

Query: 283 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           ++  + +  LQ LDLS N   + P+      L +LQ L L+R QL     +I +LQ L+ 
Sbjct: 462 AE-IEQLKKLQKLDLSVNQFTTFPK--EIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQE 518

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           LDL+ N    +P+    L  L  LDL +N ++ LP E+G L+ +LQ L L  N L
Sbjct: 519 LDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ-NLQWLYLQNNQL 572



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 188/413 (45%), Gaps = 37/413 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G KLT L    I     L EL    NLL  +P+ IG L  L  LDL  N++ + P+
Sbjct: 53  LNLSGEKLTALPKE-IGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPA 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L    +  N L  LP E+G+L  L  L L+ N+L  +  E  QL+ L  L LS
Sbjct: 112 VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++  L+ L L  N   TL   +        L+ L++          + 
Sbjct: 172 ENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEI------GQLQNLQT---------LNL 216

Query: 183 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
           +   L T+   +      +EL L    L+  P EI +   +  L    N +  LP E+  
Sbjct: 217 SDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQ 276

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL--DLS 298
             +LQTL L  N++  +P  I   L +L  L+L  NPL        K+   +Q L  D S
Sbjct: 277 LQNLQTLNLVNNRLTVFPKEI-GQLQNLQDLELLMNPL------SLKERKRIQKLFPDSS 329

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQL--------REAPTDILRLQQLRILDLSQNSLQ 350
            ++  + EN  + +L   QE  L+  +L        +  P  IL+ + LR L+L      
Sbjct: 330 LDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFS 389

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           ++P+    L +L  L L  N +  +P E+G L  +L+AL L+ N L  + + I
Sbjct: 390 TLPKEISLLKNLKYLALGLNGLKKIPSEIGQLR-NLEALNLEANELERLPKEI 441



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 198/434 (45%), Gaps = 50/434 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+L      +I     L  L  S+N L  +P  IG L  L  L L++N++ +
Sbjct: 96  LQELDLRDNQLATFPA-VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTT 154

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
            P  I    +L + ++  N L+ALP E+G+L  L TLDL  NQ      E  QL+ L  L
Sbjct: 155 FPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTL 214

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +LS+N L+ LP EIG++  L++L L  N L      +        L+ L S  PEN  + 
Sbjct: 215 NLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQN---LQMLCS--PENRLTA 269

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL--------SRNSI 231
                  L  + T        L+L    L+  P EI +   +  L+L         R  I
Sbjct: 270 LPKEMGQLQNLQT--------LNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRI 321

Query: 232 QELPP-------ELSSCASLQTLILSRN----------KIKDWPDA---ILTSLSSLSCL 271
           Q+L P       E++     + L L++           + KD+  +   ++    +L  L
Sbjct: 322 QKLFPDSSLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGL 381

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILD-LSYNIASLPENP-PFSSLPHLQELYLRRMQLREA 329
            L +     +P    K+I +L+ L  L+  +  L + P     L +L+ L L   +L   
Sbjct: 382 NLYDCGFSTLP----KEISLLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERL 437

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
           P +I +L+ L+ L L QN+L+  P   + L  L +LDLS N  +  P E+G LE +LQ L
Sbjct: 438 PKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE-NLQTL 496

Query: 390 RLDGNPLRSIRRTI 403
            L  N L ++   I
Sbjct: 497 NLQRNQLTNLTAEI 510



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 146/289 (50%), Gaps = 29/289 (10%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS   L+ LP EIG++  L++L L  N L TL         P  +  L     
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTL---------PKEIGQL----- 93

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSR 228
             E+ +    +++   +AT  +V  +   LE ++LS      +P+EI     +  L L +
Sbjct: 94  --ENLQELDLRDN--QLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYK 149

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +   P E+    +LQ L LS N++   P  I   L +L  L L +N    +P +    
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQDNQFTTLPKE-IGQ 207

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  LQ L+LS N +A+LP       L +LQELYLR  +L   P +I +LQ L++L   +N
Sbjct: 208 LQNLQTLNLSDNQLATLP--VEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPEN 265

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L ++P+    L +L  L+L +N ++  P E+G L+ +LQ L L  NPL
Sbjct: 266 RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQ-NLQDLELLMNPL 313



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 121/229 (52%), Gaps = 8/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+ E  T ++  +T A +  +  + L+L G  L+A+P EI +   + +L+L  N +  LP
Sbjct: 30  EEVEPGTYRD--LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L L  N++  +P A++  L  L  L L  N L  +P++    +  LQ L
Sbjct: 88  KEIGQLENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IGRLQNLQDL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L  N + + P+      L +LQ+L+L   +L   P +I +L+ L+ LDL  N   ++P+
Sbjct: 146 GLYKNKLTTFPK--EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L  L+LSDN ++ LP E+G L+ +LQ L L  N L    + I
Sbjct: 204 EIGQLQNLQTLNLSDNQLATLPVEIGQLQ-NLQELYLRNNRLTVFPKEI 251



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 95/234 (40%), Gaps = 37/234 (15%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ I  L  L  L L  N +  IPS I    +L    +  N L  LP E+G+L  L  L
Sbjct: 391 LPKEISLLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQKL 450

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            LH N LK +  E  QL+ L  LDLS N  +  P EIGK+  L+ L L  N L  L + +
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEI 510

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
             G    L                                  +EL L     + +P EI 
Sbjct: 511 --GQLQNL----------------------------------QELDLNDNQFTVLPKEIG 534

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +  ++  LDL  N +  LP E+    +LQ L L  N++       +  L  L C
Sbjct: 535 KLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRKLLPLKC 588



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 7/144 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N L +     I     L +L  S N     P+ IG L  L  L+L +N++ +
Sbjct: 447 LQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTN 505

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           + + I    +L E  + +N  + LP E+GKL KL TLDL +NQL     E  QL+ L  L
Sbjct: 506 LTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 565

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL 143
            L NN LS     + +   +RKLL
Sbjct: 566 YLQNNQLS-----LKEQERIRKLL 584


>gi|427738149|ref|YP_007057693.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
           7116]
 gi|427373190|gb|AFY57146.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
           7116]
          Length = 989

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 134/433 (30%), Positives = 204/433 (47%), Gaps = 76/433 (17%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASK-------------NLLNGMPETIGSLSRLI 49
           +LD+ G  LT L    I   T L +LI  K             N L+ +P+ IG L++L 
Sbjct: 20  ELDLSGKGLTTLPPE-IGKLTQLKKLILGKHKYDQGYIIDTIGNKLSELPKEIGWLAQLE 78

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
            L + +N++ ++P+ I    +L   ++  N LS+LPAE+ +LS L +LDL  N       
Sbjct: 79  ELQIIRNQLDNLPAEIVQLTNLQSLHLEENQLSSLPAEIARLSNLQSLDLSYN------- 131

Query: 110 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
                         N L GLP EI +++ L+ L L GN L                    
Sbjct: 132 --------------NKLIGLPAEIVQLSNLQSLRLRGNKL-------------------- 157

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           S LP               T   +LS   + L L    LS++P+EI +   +  LDL  N
Sbjct: 158 SSLP---------------TEVVQLS-NLQNLDLRYNQLSSLPAEIAQLSNLQNLDLWHN 201

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP E++  ++LQ L LS NK+   P A +  LS+L  L L  N L  +P +  + +
Sbjct: 202 KLSSLPAEIAQLSNLQNLDLSFNKLSSLP-AEIVQLSNLQNLDLRYNQLSNLPVEIVQ-L 259

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ L+L+ N + SL        L  LQ L L   +L   P +I +L  L+ L+LS N 
Sbjct: 260 SNLQSLNLTSNQLNSLL--IEIFQLTSLQSLNLSHNKLSSLPVEIGQLNSLQSLNLSYNK 317

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGT 408
           L S+P     LT L  L+L +N ++ LP E+G L   L+ L LD NPL+ +   I +R +
Sbjct: 318 LSSLPAEIGQLTCLQSLNLRNNQLNRLPTEIGHLHLHLKVLTLDNNPLKFLPAEIRNRHS 377

Query: 409 KAVLKYLKDKIPE 421
           + +L + K ++ +
Sbjct: 378 QRILNFYKQQLEQ 390


>gi|260788690|ref|XP_002589382.1| hypothetical protein BRAFLDRAFT_77824 [Branchiostoma floridae]
 gi|229274559|gb|EEN45393.1| hypothetical protein BRAFLDRAFT_77824 [Branchiostoma floridae]
          Length = 699

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 179/391 (45%), Gaps = 15/391 (3%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +   T L  L  S N L  +PE IG L +L RLD H N +  +P +I     L   Y+ +
Sbjct: 32  VFDITDLEFLGVSNNRLTSIPEAIGRLQKLSRLDAHGNMLTRLPQAIGSLQKLTHLYVYS 91

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP  + KL KL  L +  N+L E       L  L VLD+SNN LS  PP + K+ 
Sbjct: 92  NKLANLPPGIEKLQKLTLLSIGDNRLTEVPPGVFLLPNLEVLDVSNNKLSTFPPGVEKLQ 151

Query: 138 TLRKLLLTGN---PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            LR L +  N    L+ LR   +NG     +      LP  E    S  K          
Sbjct: 152 KLRVLGIYDNQLTELQKLRELHINGNQLTEVPSGVCSLPNLEVLSVSNNKLSTFPPGVEK 211

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL----- 249
               +EL + G  L+ +PS +     +  L +  N +   PP +     L+ L +     
Sbjct: 212 LQKLRELHINGNQLTEVPSGVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRQLDIYGVKC 271

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 308
             NK+  +P  +   L  L  L++  N L +VP  G   +P L++LD+S + +++ P  P
Sbjct: 272 HNNKLSTFPPGV-EKLQKLRELRIYGNQLAEVPR-GVCSLPNLEVLDVSNSKLSTFP--P 327

Query: 309 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 368
               L  L++L++   QL E P+ +  L  L  L +  N L + P G + L  L +L + 
Sbjct: 328 GVEKLQKLRQLHINGNQLTEVPSGVCSLPNLEELSVYNNKLSTFPPGVEKLQKLRQLYIY 387

Query: 369 DNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            N ++ +PP +  L P+L+ L +  N L + 
Sbjct: 388 GNQLTEVPPGVCSL-PNLEVLSVYNNKLSTF 417



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 198/454 (43%), Gaps = 60/454 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S+LD  GN LT L    I S   LT L    N L  +P  I  L +L  L +  NR+  
Sbjct: 61  LSRLDAHGNMLTRLPQ-AIGSLQKLTHLYVYSNKLANLPPGIEKLQKLTLLSIGDNRLTE 119

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL------KEYCVEACQL 114
           +P  +    +L    + NN LS  P  + KL KL  L ++ NQL      +E  +   QL
Sbjct: 120 VPPGVFLLPNLEVLDVSNNKLSTFPPGVEKLQKLRVLGIYDNQLTELQKLRELHINGNQL 179

Query: 115 -----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 163
                       L VL +SNN LS  PP + K+  LR+L + GN L  + S + + P   
Sbjct: 180 TEVPSGVCSLPNLEVLSVSNNKLSTFPPGVEKLQKLRELHINGNQLTEVPSGVCSLPNLE 239

Query: 164 LLKYLRSRL---PENEDSEASTTKEDLITMATRLSVTS------------KELSLEGMNL 208
           +L    ++L   P   +      + D+  +    +  S            +EL + G  L
Sbjct: 240 VLSVYNNKLSTFPPGVEKLQKLRQLDIYGVKCHNNKLSTFPPGVEKLQKLRELRIYGNQL 299

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
           + +P  +     +  LD+S + +   PP +     L+ L ++ N++ + P  +  SL +L
Sbjct: 300 AEVPRGVCSLPNLEVLDVSNSKLSTFPPGVEKLQKLRQLHINGNQLTEVPSGV-CSLPNL 358

Query: 269 SCLKLDNNPLRQVPSD----------------------GFKDIPMLQILDLSYN-IASLP 305
             L + NN L   P                        G   +P L++L +  N +++ P
Sbjct: 359 EELSVYNNKLSTFPPGVEKLQKLRQLYIYGNQLTEVPPGVCSLPNLEVLSVYNNKLSTFP 418

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
             P    L  L+ELY+   QL E P+ +  L  L ++ ++ N L + P G + L  L EL
Sbjct: 419 --PGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEVVYVNNNKLSTFPPGVERLQKLREL 476

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            +  N ++ +PP +  L  +L+ L +  NP+R +
Sbjct: 477 HVHGNQLTEIPPVVCYLT-NLEVLIISDNPIRHL 509



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 190/426 (44%), Gaps = 59/426 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L + GN+L  +    + S   L  L  S + L+  P  +  L +L +L ++ N++  
Sbjct: 289 LRELRIYGNQLAEVPRG-VCSLPNLEVLDVSNSKLSTFPPGVEKLQKLRQLHINGNQLTE 347

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +PS +    +L E  + NN LS  P  + KL KL  L ++ NQL E     C L  L VL
Sbjct: 348 VPSGVCSLPNLEELSVYNNKLSTFPPGVEKLQKLRQLYIYGNQLTEVPPGVCSLPNLEVL 407

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            + NN LS  PP + K+  LR+L +  N L  + S + +             LP  E   
Sbjct: 408 SVYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCS-------------LPNLEVVY 454

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            +  K                       LS  P  +    ++ +L +  N + E+PP + 
Sbjct: 455 VNNNK-----------------------LSTFPPGVERLQKLRELHVHGNQLTEIPPVVC 491

Query: 240 SCASLQTLILSRNKIKDWPDAI--LTSLSSL---SCLKLDNNPLRQVPSD--GFKDIPML 292
              +L+ LI+S N I+  PD +  LT L +L    C         Q P      K +  L
Sbjct: 492 YLTNLEVLIISDNPIRHLPDGVRRLTRLKTLYVSGC---------QFPGQVLQLKTLEKL 542

Query: 293 QILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
                 +++  LP+     +L HL  L L    LR  P+ +  L  LR + L +N   + 
Sbjct: 543 HAGGCKFDM--LPDE--VGNLQHLWFLSLSSNLLRTLPSTMSHLHNLREVHLDKNKFDTF 598

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVL 412
           PE   +L ++ +L +S+NNI+ LP  L   +  L+ L + GNPL    + + ++GT A++
Sbjct: 599 PEVLCDLPAMEKLFISNNNITRLPTALHRAD-KLKDLDVSGNPLTYPPQDVCEQGTAAIM 657

Query: 413 KYLKDK 418
            +LK +
Sbjct: 658 AFLKQE 663



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 173/375 (46%), Gaps = 18/375 (4%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           LN  P+T+  L   + LDL    + SIP  +     L    + NN L+++P  +G+L KL
Sbjct: 5   LNLQPQTVDGL---LTLDLSNQGLTSIPEEVFDITDLEFLGVSNNRLTSIPEAIGRLQKL 61

Query: 95  GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LD H N L         L +L+ L + +N L+ LPP I K+  L  L +  N L  + 
Sbjct: 62  SRLDAHGNMLTRLPQAIGSLQKLTHLYVYSNKLANLPPGIEKLQKLTLLSIGDNRLTEVP 121

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA-TRLSVTSK--ELSLEGMNLSA 210
             +   P   +L    ++L           K  ++ +   +L+   K  EL + G  L+ 
Sbjct: 122 PGVFLLPNLEVLDVSNNKLSTFPPGVEKLQKLRVLGIYDNQLTELQKLRELHINGNQLTE 181

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +PS +     +  L +S N +   PP +     L+ L ++ N++ + P  +  SL +L  
Sbjct: 182 VPSGVCSLPNLEVLSVSNNKLSTFPPGVEKLQKLRELHINGNQLTEVPSGV-CSLPNLEV 240

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDL------SYNIASLPENPPFSSLPHLQELYLRRM 324
           L + NN L   P  G + +  L+ LD+      +  +++ P  P    L  L+EL +   
Sbjct: 241 LSVYNNKLSTFPP-GVEKLQKLRQLDIYGVKCHNNKLSTFP--PGVEKLQKLRELRIYGN 297

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
           QL E P  +  L  L +LD+S + L + P G + L  L +L ++ N ++ +P  +  L P
Sbjct: 298 QLAEVPRGVCSLPNLEVLDVSNSKLSTFPPGVEKLQKLRQLHINGNQLTEVPSGVCSL-P 356

Query: 385 SLQALRLDGNPLRSI 399
           +L+ L +  N L + 
Sbjct: 357 NLEELSVYNNKLSTF 371



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 28/211 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L V GN+LT +   ++   T L  LI S N +  +P+ +  L+RL  L +       
Sbjct: 473 LRELHVHGNQLTEIPP-VVCYLTNLEVLIISDNPIRHLPDGVRRLTRLKTLYVSG---CQ 528

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN-------------QLKEY 107
            P  +    +L + + G      LP E+G L  L  L L SN              L+E 
Sbjct: 529 FPGQVLQLKTLEKLHAGGCKFDMLPDEVGNLQHLWFLSLSSNLLRTLPSTMSHLHNLREV 588

Query: 108 CVEA----------CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            ++           C L  +  L +SNN+++ LP  + +   L+ L ++GNPL      +
Sbjct: 589 HLDKNKFDTFPEVLCDLPAMEKLFISNNNITRLPTALHRADKLKDLDVSGNPLTYPPQDV 648

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
               T A++ +L+    +         K+ L
Sbjct: 649 CEQGTAAIMAFLKQEAEKGTKRAGQEEKKGL 679


>gi|45656981|ref|YP_001067.1| hypothetical protein LIC11097 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600218|gb|AAS69704.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|456983452|gb|EMG19761.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 413

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 124/369 (33%), Positives = 175/369 (47%), Gaps = 41/369 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  +KL +L    I     L  L +  N L  +P+ IG L  L  L L  N++ ++P 
Sbjct: 62  LDLSRSKLKILPKE-IGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPE 120

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L   ++ NN L+ LP E+GKL  L  L+L  N+L     E  +L+ L  L LS
Sbjct: 121 EIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLS 180

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++ +LRKL L G           N P   L K                
Sbjct: 181 LNRLTILPEEIGQLESLRKLSLGGK----------NKPFTILPKE--------------- 215

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                IT    L    +EL L+   L+ +P EI +   +  LDL +N +  LP E+    
Sbjct: 216 -----ITQLQNL----QELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLK 266

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +L  L LS N++   P  I T L +L  L L+ N     P +       LQ+LDL  N +
Sbjct: 267 NLLVLDLSGNQLTILPKEI-TQLQNLQELNLEYNRFEAFPKE-ITQFQNLQVLDLYQNRL 324

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
            +LPE      L +LQ+L+L R QL   P +I RLQ+L  L L  N L ++PE  K L +
Sbjct: 325 TTLPE--EIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKN 382

Query: 362 LTELDLSDN 370
           L +L L +N
Sbjct: 383 LKKLYLHNN 391



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 179/393 (45%), Gaps = 76/393 (19%)

Query: 20  ASWTMLTELIA----------SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 69
            S+T LTE +           S++ L  +P+ IG L  L  L+   N++ ++P  I    
Sbjct: 44  GSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQ 103

Query: 70  SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 128
           +L E ++ NN L+ LP E+G+L  L  L L++NQL     E  +L+ L  L+L  N L+ 
Sbjct: 104 NLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNI 163

Query: 129 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 188
           LP EIG++  L++L L+ N L                    + LPE      S  K    
Sbjct: 164 LPKEIGRLQNLQELYLSLNRL--------------------TILPEEIGQLESLRK---- 199

Query: 189 TMATRLSVTSKELSLEGMN--LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
                       LSL G N   + +P EI +   + +L L  N +  LP E+    +L+ 
Sbjct: 200 ------------LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRI 247

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 306
           L L +N++   P  I   L +L  L L  N L  +P +                      
Sbjct: 248 LDLYQNRLTILPKEI-GQLKNLLVLDLSGNQLTILPKE---------------------- 284

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
               + L +LQEL L   +    P +I + Q L++LDL QN L ++PE    L +L +L 
Sbjct: 285 ---ITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLH 341

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LS N ++ LP E+G L+  L++L LD N L ++
Sbjct: 342 LSRNQLTTLPKEIGRLQ-KLESLGLDHNQLATL 373



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 159/358 (44%), Gaps = 69/358 (19%)

Query: 68  CCSLAEFYMGNN---ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 123
            CSL +F+   N   + + L   L   +++  LDL  ++LK    E  QL+ L +L+  N
Sbjct: 30  VCSLTQFHAEENHKGSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSEN 89

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N L+ LP EIGK+  L++L L  N L T                    LPE         
Sbjct: 90  NQLTTLPKEIGKLQNLQELHLQNNQLTT--------------------LPEE-------- 121

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
               I     L V    L L    L+ +P EI +   + +L+L  N +  LP E+    +
Sbjct: 122 ----IGQLQNLKV----LHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQN 173

Query: 244 LQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
           LQ L LS N++   P+ I  L SL  LS L   N P   +P +                 
Sbjct: 174 LQELYLSLNRLTILPEEIGQLESLRKLS-LGGKNKPFTILPKE----------------- 215

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
                    + L +LQEL+L+  +L   P +I +LQ LRILDL QN L  +P+    L +
Sbjct: 216 --------ITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKN 267

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           L  LDLS N ++ LP E+  L+ +LQ L L+ N   +  + I       VL   ++++
Sbjct: 268 LLVLDLSGNQLTILPKEITQLQ-NLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRL 324



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 23/165 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ GN+LT+L    I     L EL    N     P+ I     L  LDL+QNR+ ++P 
Sbjct: 271 LDLSGNQLTILPKE-ITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPE 329

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I    +L + ++  N L+ LP E+G+L KL +L L  NQL                   
Sbjct: 330 EIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL------------------- 370

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
              + LP EI ++  L+KL L  NPL + +   +    P  + Y 
Sbjct: 371 ---ATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRKLLPQCIIYF 412


>gi|417761949|ref|ZP_12409946.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776878|ref|ZP_12424710.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672964|ref|ZP_13234294.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942211|gb|EKN87831.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573374|gb|EKQ36424.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580071|gb|EKQ47902.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 597

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 128/413 (30%), Positives = 192/413 (46%), Gaps = 26/413 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ +
Sbjct: 167 LQKLWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLAT 225

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+ NN L+  P E+G+L  L  L    N+L     +  QL+ L  L
Sbjct: 226 LPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKKMGQLQNLQTL 285

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L NN L+  P EIG++  L+ L L  NPL       +    P     LR  + EN    
Sbjct: 286 NLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLRE-VAENGVYR 344

Query: 180 ASTTKEDLITMATRLSVTSKELS------------LEGMNL-----SAIPSEIWEAGEIT 222
                ++       LS+  K+ S            L G+NL     S +P EI     + 
Sbjct: 345 NLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLK 404

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
            L L  N ++ +P E+    +L+ L L  N+++  P  I   L +L  L L  N L+  P
Sbjct: 405 YLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEI-GQLRNLQKLSLHQNTLKIFP 463

Query: 283 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           ++  + +  LQ LDLS N   + P+      L +LQ L L+R QL   P +I +L+ L+ 
Sbjct: 464 AE-IEQLKKLQKLDLSVNQFTTFPKE--IGKLENLQTLNLQRNQLTNLPAEIEQLKNLQE 520

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           LDL+ N    +P+    L  L  LDL +N ++ LP E+G L+ +LQ L L  N
Sbjct: 521 LDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ-NLQWLYLQNN 572



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 188/424 (44%), Gaps = 48/424 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G KLT L    I     L EL    NLL  +P+ IG L  L  LDL  N++ + P+
Sbjct: 55  LNLSGEKLTALPKE-IGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPA 113

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L    +  N L  LP E+G+L  L  L L+ N+L  +  E  QL+ L  L LS
Sbjct: 114 VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLS 173

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++  L+ L L  N    L   +        L+ L++          + 
Sbjct: 174 ENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEI------GQLQNLQT---------LNL 218

Query: 183 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
           +   L T+   +      +EL L    L+  P EI +   +  L    N +  LP ++  
Sbjct: 219 SDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKKMGQ 278

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-------------------LRQV 281
             +LQTL L  N++  +P  I   L +L  L+L  NP                   LR+V
Sbjct: 279 LQNLQTLNLVNNRLTVFPKEI-GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREV 337

Query: 282 PSDG-FKDIPM-----LQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDI 333
             +G ++++ +     L++ +LS       ++ P       +L+ L L        P +I
Sbjct: 338 AENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI 397

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
            RL+ L+ L L  N L++IP     L +L  L+L  N +  LP E+G L  +LQ L L  
Sbjct: 398 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLR-NLQKLSLHQ 456

Query: 394 NPLR 397
           N L+
Sbjct: 457 NTLK 460



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 195/429 (45%), Gaps = 48/429 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+L      +I     L  L  S+N L  +P  IG L  L  L L++N++ +
Sbjct: 98  LQELDLRDNQLATFPA-VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTT 156

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
            P  I    +L + ++  N L+ALP E+G+L  L TLDL  NQ      E  QL+ L  L
Sbjct: 157 FPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTL 216

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +LS+N L+ LP EIG++  L++L L  N L      +        L+ L S  PEN  + 
Sbjct: 217 NLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQN---LQMLCS--PENRLTA 271

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL--------SRNSI 231
                  L  + T        L+L    L+  P EI +   +  L+L         R  I
Sbjct: 272 LPKKMGQLQNLQT--------LNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRI 323

Query: 232 QELPP-------ELSSCASLQTLILSRN----------KIKDWPDA---ILTSLSSLSCL 271
           Q+L P       E++     + L L++           + KD+  +   ++    +L  L
Sbjct: 324 QKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGL 383

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
            L +     +P +    +  L+ L L  N + ++P       L +L+ L L   +L   P
Sbjct: 384 NLYDCGFSTLPKE-ISRLKNLKYLALGLNGLKNIP--SEIGQLKNLEALNLEANELERLP 440

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +I +L+ L+ L L QN+L+  P   + L  L +LDLS N  +  P E+G LE +LQ L 
Sbjct: 441 KEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE-NLQTLN 499

Query: 391 LDGNPLRSI 399
           L  N L ++
Sbjct: 500 LQRNQLTNL 508



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 145/289 (50%), Gaps = 29/289 (10%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS   L+ LP EIG++  L++L L  N                LL  L   + 
Sbjct: 50  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWN----------------LLTVLPKEIG 93

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSR 228
           + E+ +    +++   +AT  +V  +   LE ++LS      +P+EI     +  L L +
Sbjct: 94  QLENLQELDLRDN--QLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYK 151

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +   P E+    +LQ L LS N++   P  I   L +L  L L +N    +P +    
Sbjct: 152 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQDNQFTILPKE-IGQ 209

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  LQ L+LS N +A+LP       L +LQELYLR  +L   P +I +LQ L++L   +N
Sbjct: 210 LQNLQTLNLSDNQLATLP--VEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPEN 267

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L ++P+    L +L  L+L +N ++  P E+G L+ +LQ L L  NPL
Sbjct: 268 RLTALPKKMGQLQNLQTLNLVNNRLTVFPKEIGQLQ-NLQDLELLMNPL 315



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 123/237 (51%), Gaps = 11/237 (4%)

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
           +++  PE+E      T  DL T A +  +  + L+L G  L+A+P EI +   + +L+L 
Sbjct: 27  IQAEAPEDEPG----TYRDL-TKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLK 81

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            N +  LP E+    +LQ L L  N++  +P A++  L  L  L L  N L  +P++   
Sbjct: 82  WNLLTVLPKEIGQLENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IG 139

Query: 288 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
            +  LQ L L  N + + P+      L +LQ+L+L   +L   P +I +L+ L+ LDL  
Sbjct: 140 RLQNLQDLGLYKNKLTTFPK--EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQD 197

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           N    +P+    L +L  L+LSDN ++ LP E+G L+ +LQ L L  N L    + I
Sbjct: 198 NQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQ-NLQELYLRNNRLTVFPKEI 253



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 98/234 (41%), Gaps = 37/234 (15%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ I  L  L  L L  N + +IPS I    +L    +  N L  LP E+G+L  L  L
Sbjct: 393 LPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKL 452

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            LH N LK +  E  QL+ L  LDLS N  +  P EIGK+  L+ L L  N L  L    
Sbjct: 453 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNL---- 508

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                PA ++ L++                            +EL L     + +P EI 
Sbjct: 509 -----PAEIEQLKN---------------------------LQELDLNDNQFTVLPKEIG 536

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +  ++  LDL  N +  LP E+    +LQ L L  N+        +  L  L C
Sbjct: 537 KLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFSFEEQERIRKLLPLKC 590



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 65/128 (50%), Gaps = 2/128 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N L +     I     L +L  S N     P+ IG L  L  L+L +N++ +
Sbjct: 449 LQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTN 507

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E  + +N  + LP E+GKL KL TLDL +NQL     E  QL+ L  L
Sbjct: 508 LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 567

Query: 120 DLSNNSLS 127
            L NN  S
Sbjct: 568 YLQNNQFS 575


>gi|383865861|ref|XP_003708391.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Megachile
           rotundata]
          Length = 610

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 180/396 (45%), Gaps = 47/396 (11%)

Query: 48  LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 107
           + RLDL ++ I ++PS++     L EFY+  N L  LP E+G L+ L TL L  N L   
Sbjct: 131 VTRLDLSKSSITNLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLANLETLALSENSLTSL 190

Query: 108 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
                 L+ L VLDL +N LS +P  + K+T+L  L L  N +R +  ++ N     +L 
Sbjct: 191 PNTLENLKSLRVLDLRHNKLSEIPDVVYKLTSLTTLFLRFNRVRYVSDNIRNLTNLTMLS 250

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL----------------SLEGMNLSA 210
                L EN+  E       L+ + T   V+   L                 L+   L  
Sbjct: 251 -----LRENKIKELPAGIGKLVNLIT-FDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLD 304

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           IP  I     +T+L L  N +  +P  L++C  +    +  N++   PD +L SLS L+ 
Sbjct: 305 IPDTIGNLISLTRLGLRYNRLSNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTT 364

Query: 271 LKLDNNPLRQVPSDG---FKDIPML-----QILDLSYNIASLPEN--------PPFSSLP 314
           + L  N     PS G   F ++  +     +I  + Y I S  +N           ++LP
Sbjct: 365 ITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLTKLNMKENQLTALP 424

Query: 315 -------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                  ++ EL L   QL + P DI  LQ L IL LS N L+ IP    NL  L  LDL
Sbjct: 425 LDIGTWVNMVELNLGTNQLTKIPDDIQCLQSLEILILSNNLLKRIPASIANLRKLRVLDL 484

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            +N I +LP E+G L   LQ L L  N + S+ R I
Sbjct: 485 EENKIESLPNEIGFLR-DLQKLILQSNQVTSLPRAI 519



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 205/429 (47%), Gaps = 24/429 (5%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N LT L N L  +   L  L    N L+ +P+ +  L+ L  L L  NR+  +  +I   
Sbjct: 185 NSLTSLPNTL-ENLKSLRVLDLRHNKLSEIPDVVYKLTSLTTLFLRFNRVRYVSDNIRNL 243

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLS 127
            +L    +  N +  LPA +GKL  L T D+  N L+    E    ++LS LDL +N L 
Sbjct: 244 TNLTMLSLRENKIKELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELL 303

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            +P  IG + +L +L L  N L  +  SL N           +++ +  D   ++   DL
Sbjct: 304 DIPDTIGNLISLTRLGLRYNRLSNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLS-DL 362

Query: 188 ITMA-TRLSVTS------------KELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQE 233
            T+  +R + T+              ++LE   +  IP  I+  A  +TKL++  N +  
Sbjct: 363 TTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLTKLNMKENQLTA 422

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP ++ +  ++  L L  N++   PD I   L SL  L L NN L+++P+    ++  L+
Sbjct: 423 LPLDIGTWVNMVELNLGTNQLTKIPDDI-QCLQSLEILILSNNLLKRIPA-SIANLRKLR 480

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
           +LDL  N I SLP    F  L  LQ+L L+  Q+   P  I  L  L  L + +N+L  +
Sbjct: 481 VLDLEENKIESLPNEIGF--LRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYL 538

Query: 353 PEGFKNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAV 411
           PE    L +L  L ++DN N+  LP EL L   +L  + ++  PL  I   I+  G   V
Sbjct: 539 PEEIGTLENLDSLYVNDNANLHNLPFELALC-TNLSIMSIENCPLSQIPPEIVAGGPSLV 597

Query: 412 LKYLKDKIP 420
           +++LK + P
Sbjct: 598 IQFLKMQGP 606



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 103/217 (47%), Gaps = 13/217 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E NK+  +   + +    LT+L   +N L  +P  IG+   ++ L+L  N++  IP 
Sbjct: 389 INLEHNKIDKIPYGIFSRAKNLTKLNMKENQLTALPLDIGTWVNMVELNLGTNQLTKIPD 448

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    SL    + NN L  +PA +  L KL  LDL  N+++    E   LR L  L L 
Sbjct: 449 DIQCLQSLEILILSNNLLKRIPASIANLRKLRVLDLEENKIESLPNEIGFLRDLQKLILQ 508

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N ++ LP  IG +T L  L +  N L  L   +        L+ L S L  N+++    
Sbjct: 509 SNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEI------GTLENLDS-LYVNDNANLHN 561

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 219
              +L  + T LS+    +S+E   LS IP EI   G
Sbjct: 562 LPFEL-ALCTNLSI----MSIENCPLSQIPPEIVAGG 593


>gi|198433833|ref|XP_002122418.1| PREDICTED: similar to Leucine-rich repeat protein SHOC-2
           (Ras-binding protein Sur-8) [Ciona intestinalis]
          Length = 531

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 132/409 (32%), Positives = 200/409 (48%), Gaps = 32/409 (7%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +P+ +  L  L +L L  N+I +I  +I    +L +  +  N +  +P+E+GKL+
Sbjct: 129 NKLREVPQVVYQLQSLRKLYLRFNKITTIDPAIENLSNLTQLIIRENKVREIPSEIGKLT 188

Query: 93  KLGTLDLHSNQLKEYCVEACQLRL-SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
           +L T+D+  N+LKE   E    RL + LDL  N L+ LP  IG +  L +L L  N L  
Sbjct: 189 QLVTIDVSYNELKEIPEEIGNCRLVTFLDLQYNRLTQLPESIGNLVKLNRLGLKYNHLLG 248

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSE-------ASTTKEDLITMA-TRLS-------- 195
           L  SL N     LL  L     EN D E       +S T    +T+A  + S        
Sbjct: 249 LPRSLQNC---VLLSDLNL---ENNDIETLPDGFLSSLTNLTSVTLARNKFSSYPVGGPS 302

Query: 196 -VTS-KELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
             TS   L++E   +  IP EI+  A  ++ L++  N +  LP ++ S  S+  L L+ N
Sbjct: 303 QFTSLGTLNMEHNQVDRIPFEIFSRATHLSTLNMRSNQLTSLPLDVGSWKSMVELCLNSN 362

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY-NIASLPENPPFS 311
           ++   PD I   L SL  L + NN LR++P      +  LQ LDL   N+ SLP      
Sbjct: 363 QLTRLPDDI-GKLQSLQVLMVSNNLLRKIPG-SIGQLTNLQCLDLEENNLESLPSE--IE 418

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
            L  L++L L+  +L   P  +  L  L IL + +N ++ +P    NL SL EL L+DN 
Sbjct: 419 HLTQLRKLKLQGNKLTVLPRGLGHLSNLTILAVGENQMRDLPNEIGNLKSLEELYLNDNP 478

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           +  LP EL L    L  + ++  PL  I    ++ G   +++YL+ K P
Sbjct: 479 LQVLPFELALCT-KLALMSVEDCPLSQIPTLAVEGGPSTIMQYLRVKGP 526



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 192/399 (48%), Gaps = 47/399 (11%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +  TI ++++L  + L+QN++  +P  +    +L    +  N L++LPA L  L +L
Sbjct: 62  LTSLSTTIKNMTQLCEIFLYQNKLAKVPDELGQLVNLTILALNENHLTSLPASLQNLKQL 121

Query: 95  GTLDLHSNQLKEYCVEACQL-----------RLSVLD-----LSN--------NSLSGLP 130
             LDL  N+L+E      QL           +++ +D     LSN        N +  +P
Sbjct: 122 KMLDLRHNKLREVPQVVYQLQSLRKLYLRFNKITTIDPAIENLSNLTQLIIRENKVREIP 181

Query: 131 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 190
            EIGK+T L  + ++ N L+ +   + N      L    +RL +  +S  +  K +    
Sbjct: 182 SEIGKLTQLVTIDVSYNELKEIPEEIGNCRLVTFLDLQYNRLTQLPESIGNLVKLN---- 237

Query: 191 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-LSSCASLQTLIL 249
                     L L+  +L  +P  +     ++ L+L  N I+ LP   LSS  +L ++ L
Sbjct: 238 ---------RLGLKYNHLLGLPRSLQNCVLLSDLNLENNDIETLPDGFLSSLTNLTSVTL 288

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 308
           +RNK   +P    +  +SL  L +++N + ++P + F     L  L++  N + SLP + 
Sbjct: 289 ARNKFSSYPVGGPSQFTSLGTLNMEHNQVDRIPFEIFSRATHLSTLNMRSNQLTSLPLD- 347

Query: 309 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 368
              S   + EL L   QL   P DI +LQ L++L +S N L+ IP     LT+L  LDL 
Sbjct: 348 -VGSWKSMVELCLNSNQLTRLPDDIGKLQSLQVLMVSNNLLRKIPGSIGQLTNLQCLDLE 406

Query: 369 DNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
           +NN+ +LP E+  L   L+ L+L GN L     T+L RG
Sbjct: 407 ENNLESLPSEIEHLT-QLRKLKLQGNKL-----TVLPRG 439



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 102/181 (56%), Gaps = 5/181 (2%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L L  ++L+++ + I    ++ ++ L +N + ++P EL    +L  L L+ N +   P A
Sbjct: 55  LDLSQLDLTSLSTTIKNMTQLCEIFLYQNKLAKVPDELGQLVNLTILALNENHLTSLP-A 113

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
            L +L  L  L L +N LR+VP   ++ +  L+ L L +N I ++  +P   +L +L +L
Sbjct: 114 SLQNLKQLKMLDLRHNKLREVPQVVYQ-LQSLRKLYLRFNKITTI--DPAIENLSNLTQL 170

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            +R  ++RE P++I +L QL  +D+S N L+ IPE   N   +T LDL  N ++ LP  +
Sbjct: 171 IIRENKVREIPSEIGKLTQLVTIDVSYNELKEIPEEIGNCRLVTFLDLQYNRLTQLPESI 230

Query: 380 G 380
           G
Sbjct: 231 G 231



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 90/174 (51%), Gaps = 2/174 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M +L +  N+LT L ++ I     L  L+ S NLL  +P +IG L+ L  LDL +N + S
Sbjct: 354 MVELCLNSNQLTRLPDD-IGKLQSLQVLMVSNNLLRKIPGSIGQLTNLQCLDLEENNLES 412

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +PS I     L +  +  N L+ LP  LG LS L  L +  NQ+++   E   L+ L  L
Sbjct: 413 LPSEIEHLTQLRKLKLQGNKLTVLPRGLGHLSNLTILAVGENQMRDLPNEIGNLKSLEEL 472

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            L++N L  LP E+   T L  + +   PL  + +  V G    +++YLR + P
Sbjct: 473 YLNDNPLQVLPFELALCTKLALMSVEDCPLSQIPTLAVEGGPSTIMQYLRVKGP 526



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 24/176 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++E N++  +   + +  T L+ L    N L  +P  +GS   ++ L L+ N++  
Sbjct: 307 LGTLNMEHNQVDRIPFEIFSRATHLSTLNMRSNQLTSLPLDVGSWKSMVELCLNSNQLTR 366

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA---CQLR-- 115
           +P  I    SL    + NN L  +P  +G+L+ L  LDL  N L+    E     QLR  
Sbjct: 367 LPDDIGKLQSLQVLMVSNNLLRKIPGSIGQLTNLQCLDLEENNLESLPSEIEHLTQLRKL 426

Query: 116 -------------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
                              L++L +  N +  LP EIG + +L +L L  NPL+ L
Sbjct: 427 KLQGNKLTVLPRGLGHLSNLTILAVGENQMRDLPNEIGNLKSLEELYLNDNPLQVL 482


>gi|455791562|gb|EMF43369.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 380

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 116/348 (33%), Positives = 170/348 (48%), Gaps = 43/348 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 54  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 113

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L +L  L L  N L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 114 IEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 167

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           S                              L+L    +  IP EI +  ++  L L  N
Sbjct: 168 S------------------------------LNLSYNQIKTIPKEIEKLQKLQSLGLDNN 197

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP E+    +LQTL L  N++  +P  I   L +L  L L +N L  +P +  K +
Sbjct: 198 QLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEI-EQLKNLQLLYLYDNQLTVLPQE-IKQL 255

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ+LDLSYN + +LP+      L +LQEL L   QL   P +I +L+ L+ L L  N 
Sbjct: 256 KNLQLLDLSYNQLKTLPK--EIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQ 313

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           L  +P+    L +L  L L++N ++ LP E+G L+ +LQ L L+ N L
Sbjct: 314 LTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLK-NLQELYLNNNQL 360



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 159/371 (42%), Gaps = 64/371 (17%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+   L    I     L EL  +KN L  +P+ IG L  L +L+L  N+I +IP 
Sbjct: 54  LDLSANRFKTLPKE-IGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 112

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L   Y+  N L+ LP E+G+L KL  L L  NQL     E  QL+ L  L+LS
Sbjct: 113 EIEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 172

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N +  +P EI K+  L+ L L  N L TL   +                          
Sbjct: 173 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEI-------------------------- 206

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
             E L  + T        L L    L+  P EI +   +  L L  N +  LP E+    
Sbjct: 207 --EQLKNLQT--------LYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLK 256

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           +LQ L LS N++K  P  I   L +L  L L  N L  +P +                  
Sbjct: 257 NLQLLDLSYNQLKTLPKEI-EQLKNLQELNLGYNQLTVLPKE------------------ 297

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
                     L +LQ LYL   QL   P +I +LQ L++L L+ N L ++P+    L +L
Sbjct: 298 -------IEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNL 350

Query: 363 TELDLSDNNIS 373
            EL L++N +S
Sbjct: 351 QELYLNNNQLS 361



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 164/339 (48%), Gaps = 43/339 (12%)

Query: 67  GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNS 125
            C   AE +      + L   L    K+ TLDL +N+ K    E  +L+ L  L+L+ N 
Sbjct: 24  SCEIQAEEFEQQETYTDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQ 83

Query: 126 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 185
           L+ LP EIG++  LRKL L+ N ++T+   +       L K     LP+N+         
Sbjct: 84  LTILPKEIGQLKNLRKLNLSANQIKTIPKEI-----EKLQKLQSLYLPKNQ--------- 129

Query: 186 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 245
                                 L+ +P EI +  ++  L L +N +  LP E+    +L+
Sbjct: 130 ----------------------LTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLK 167

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASL 304
           +L LS N+IK  P  I   L  L  L LDNN L  +P +  + +  LQ L L  N + + 
Sbjct: 168 SLNLSYNQIKTIPKEI-EKLQKLQSLGLDNNQLTTLPKE-IEQLKNLQTLYLGNNRLTTF 225

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
           P+      L +LQ LYL   QL   P +I +L+ L++LDLS N L+++P+  + L +L E
Sbjct: 226 PK--EIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQE 283

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L+L  N ++ LP E+  L+ +LQ L L  N L  + + I
Sbjct: 284 LNLGYNQLTVLPKEIEQLK-NLQTLYLGYNQLTVLPKEI 321



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  N+LTVL    I     L  L    N L  +P+ IG L  L  L L+ N++ +
Sbjct: 281 LQELNLGYNQLTVLPKE-IEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQLTT 339

Query: 61  IPSSISGCCSLAEFYMGNNALS 82
           +P  I    +L E Y+ NN LS
Sbjct: 340 LPKEIGQLKNLQELYLNNNQLS 361


>gi|254415005|ref|ZP_05028768.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
 gi|196178152|gb|EDX73153.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1090

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 126/394 (31%), Positives = 189/394 (47%), Gaps = 80/394 (20%)

Query: 2   SKLDVEGNKLTVLSNNLIASWTMLTELIASK--------------NLLNGMPETIGSLSR 47
           ++LD+ GN LTVL  + I   T L +LI  K              N L+ +P  IG L +
Sbjct: 19  TELDLSGNDLTVLPPD-IGKLTHLKKLILGKYQYDDEGDIAGFIGNKLSALPREIGQLHQ 77

Query: 48  LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 107
           L  L +  N++  +P  I    SL    +G N +  LP E+G+L+ L +LDL  N+++E 
Sbjct: 78  LEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLTSLQSLDLRYNKIQEL 137

Query: 108 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
             E  QL  L  L+LS N++  LPPEIG++T           L++L  S  N        
Sbjct: 138 PPEIGQLTSLQSLNLSGNNIQELPPEIGQLTA----------LQSLDLSFFN-------- 179

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                                                   N+  +P +I++   +  L L
Sbjct: 180 ----------------------------------------NIQELPPQIFQLTSLQSLHL 199

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S N IQELP E+    SLQ+L LS NKI++ P  IL  L+SL  L L  N ++++P++  
Sbjct: 200 SFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEIL-QLTSLQSLHLSFNKIQELPAEIL 258

Query: 287 KDIPMLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
           + +  LQ L+L S NI  LP  P    L  LQ L L    ++E P +IL+L  L+ L+L 
Sbjct: 259 Q-LTSLQSLNLYSNNIQELP--PEILQLTSLQSLNLGGNNIQELPPEILQLTSLQSLNLR 315

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            N++Q +P   + L +L +LDL  N +  +PPE+
Sbjct: 316 SNNIQELPPEIRQLPNLKKLDLRSNPL-PIPPEI 348



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 129/376 (34%), Positives = 187/376 (49%), Gaps = 74/376 (19%)

Query: 26  TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 85
           TEL  S N L  +P  IG L+ L +L L + +       I+G       ++GN  LSALP
Sbjct: 19  TELDLSGNDLTVLPPDIGKLTHLKKLILGKYQ-YDDEGDIAG-------FIGN-KLSALP 69

Query: 86  AELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 144
            E+G+L +L  L +  NQL+E   E  QL  L  L+L  N +  LPPEIG++T+L+ L L
Sbjct: 70  REIGQLHQLEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLTSLQSLDL 129

Query: 145 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 204
             N ++ L       P    L  L+S                              L+L 
Sbjct: 130 RYNKIQEL------PPEIGQLTSLQS------------------------------LNLS 153

Query: 205 GMNLSAIPSEIWEAGEITKLDLSR-NSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           G N+  +P EI +   +  LDLS  N+IQELPP++    SLQ+L LS NKI++ P  IL 
Sbjct: 154 GNNIQELPPEIGQLTALQSLDLSFFNNIQELPPQIFQLTSLQSLHLSFNKIQELPAEIL- 212

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            L+SL  L L  N ++++P++         IL L+                 LQ L+L  
Sbjct: 213 QLTSLQSLHLSFNKIQELPAE---------ILQLT----------------SLQSLHLSF 247

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            +++E P +IL+L  L+ L+L  N++Q +P     LTSL  L+L  NNI  LPPE+  L 
Sbjct: 248 NKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNNIQELPPEILQL- 306

Query: 384 PSLQALRLDGNPLRSI 399
            SLQ+L L  N ++ +
Sbjct: 307 TSLQSLNLRSNNIQEL 322



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 114/315 (36%), Positives = 163/315 (51%), Gaps = 26/315 (8%)

Query: 102 NQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 161
           N+L +   +A +   + LDLS N L+ LPP+IGK+T L+KL+L              G  
Sbjct: 4   NELLQLIEQAAREEWTELDLSGNDLTVLPPDIGKLTHLKKLILGKYQYDD------EGDI 57

Query: 162 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL----SLEGMNLSA-----IP 212
              +    S LP  E  +    +E  I +  +L     E+    SL+ +NL       +P
Sbjct: 58  AGFIGNKLSALPR-EIGQLHQLEELQIAL-NQLQELPPEILQLTSLQSLNLGCNKIQELP 115

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSC 270
            EI +   +  LDL  N IQELPPE+    SLQ+L LS N I++ P  I  LT+L SL  
Sbjct: 116 PEIGQLTSLQSLDLRYNKIQELPPEIGQLTSLQSLNLSGNNIQELPPEIGQLTALQSLDL 175

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 329
              +N  ++++P   F+ +  LQ L LS+N I  LP       L  LQ L+L   +++E 
Sbjct: 176 SFFNN--IQELPPQIFQ-LTSLQSLHLSFNKIQELPAE--ILQLTSLQSLHLSFNKIQEL 230

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
           P +IL+L  L+ L LS N +Q +P     LTSL  L+L  NNI  LPPE+  L  SLQ+L
Sbjct: 231 PAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQL-TSLQSL 289

Query: 390 RLDGNPLRSIRRTIL 404
            L GN ++ +   IL
Sbjct: 290 NLGGNNIQELPPEIL 304


>gi|357618946|gb|EHJ71730.1| putative mitotic protein phosphatase 1 regulator [Danaus plexippus]
          Length = 601

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 205/452 (45%), Gaps = 84/452 (18%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
            MLT L  S N L  +P  +G L RL+ L+L  N +  +P  I     L +F + NN L 
Sbjct: 179 VMLTFLDLSHNKLTSLPPGMGYLVRLVDLNLSYNELTELPPDIVNLRDLKKFNVSNNDLK 238

Query: 83  ALPAELGKLSKLGTLDLHSNQLKE--------------------------YCVEACQL-- 114
            LPA LG+L K+ TLD + N ++E                          +C +   L  
Sbjct: 239 KLPA-LGELRKMETLDANHNAIEELPDFYGCVALKEIYIANNFIKEITEEFCDQMQHLNV 297

Query: 115 ------RLSVL-------------DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
                 +L VL             DLSNN+L+ LP  +G ++ L+ + + GN L  +R  
Sbjct: 298 LNIRDNKLEVLPENISLLQNLKRFDLSNNNLNKLPKNLGLLSQLQSISMEGNKLSFVRQD 357

Query: 156 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 215
           ++ G T  ++KYLR R+ E    EA   + +     T     S+ L +    L+++P ++
Sbjct: 358 VIRGGTDRMMKYLRDRMAEEVVGEARLNENNWPDKYTL--KKSQALIVPAKELASVPEDV 415

Query: 216 WEA---GEITKLDLSRNSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           + A    E+  +DLSRN +  LP        +L  L+LS N I+  P  I ++   L  +
Sbjct: 416 FVAAAQAEVHVIDLSRNKLTGLPAGFHLVRDTLTQLLLSSNSIEVVPPEI-SACKHLQYI 474

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 331
            L  N L         D+PM                   S L +L+EL +   +  + P 
Sbjct: 475 DLGKNCL--------TDLPM-----------------EMSDLKNLRELVISNNRFTKIPR 509

Query: 332 DILRLQQLRILDLSQNSLQSI---PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
            +  L+ L IL  ++N +  I    +    L  L  LDL++N+I  +PPELG     L++
Sbjct: 510 CVYDLENLEILLAAENQITEINVSSDALAKLKKLAVLDLTNNSIITVPPELGNF-THLRS 568

Query: 389 LRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           L L GN  R  R  +L +GT ++L YL+D+IP
Sbjct: 569 LELMGNCFRQPRHAVLTKGTASILSYLRDRIP 600



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 91/174 (52%), Gaps = 4/174 (2%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D+  NKLT L          LT+L+ S N +  +P  I +   L  +DL +N +  +P 
Sbjct: 427 IDLSRNKLTGLPAGFHLVRDTLTQLLLSSNSIEVVPPEISACKHLQYIDLGKNCLTDLPM 486

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVL 119
            +S   +L E  + NN  + +P  +  L  L  L    NQ+ E  V +  L    +L+VL
Sbjct: 487 EMSDLKNLRELVISNNRFTKIPRCVYDLENLEILLAAENQITEINVSSDALAKLKKLAVL 546

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           DL+NNS+  +PPE+G  T LR L L GN  R  R +++   T ++L YLR R+P
Sbjct: 547 DLTNNSIITVPPELGNFTHLRSLELMGNCFRQPRHAVLTKGTASILSYLRDRIP 600



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 118/255 (46%), Gaps = 39/255 (15%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N++  +   I  LS LI L LH N I SIP  I    +L+   + +N L  LP E  K
Sbjct: 95  SSNVIKIISPNIKLLSELITLKLHDNAIESIPPEIGELNNLSNLSLDHNRLECLPKEFYK 154

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L+++  L +  N +K    +   L  L+ LDLS+N L+ LPP +G +  L  L L+ N L
Sbjct: 155 LTEMRWLSISYNSIKNIEPDFGDLVMLTFLDLSHNKLTSLPPGMGYLVRLVDLNLSYNEL 214

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
             L   +VN         LR                DL           K+ ++   +L 
Sbjct: 215 TELPPDIVN---------LR----------------DL-----------KKFNVSNNDLK 238

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P+ + E  ++  LD + N+I+EL P+   C +L+ + ++ N IK+  +     +  L+
Sbjct: 239 KLPA-LGELRKMETLDANHNAIEEL-PDFYGCVALKEIYIANNFIKEITEEFCDQMQHLN 296

Query: 270 CLKLDNNPLRQVPSD 284
            L + +N L  +P +
Sbjct: 297 VLNIRDNKLEVLPEN 311



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 84/197 (42%), Gaps = 31/197 (15%)

Query: 187 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-LSSCASLQ 245
           LI  A R    + +LSL    L  +P  +W+  ++   D         P +   +   L+
Sbjct: 35  LIKSAKR----TGQLSLCNRGLGTVPENVWKVNDLVMDDTKDVDFSRSPRDNWWNAEPLK 90

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 305
            L LS N IK     I   LS L  LKL +N +  +P                       
Sbjct: 91  MLDLSSNVIKIISPNI-KLLSELITLKLHDNAIESIP----------------------- 126

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
             P    L +L  L L   +L   P +  +L ++R L +S NS+++I   F +L  LT L
Sbjct: 127 --PEIGELNNLSNLSLDHNRLECLPKEFYKLTEMRWLSISYNSIKNIEPDFGDLVMLTFL 184

Query: 366 DLSDNNISALPPELGLL 382
           DLS N +++LPP +G L
Sbjct: 185 DLSHNKLTSLPPGMGYL 201


>gi|24213573|ref|NP_711054.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386073187|ref|YP_005987504.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24194363|gb|AAN48072.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353456976|gb|AER01521.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 423

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 121/366 (33%), Positives = 179/366 (48%), Gaps = 24/366 (6%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 154 SSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
                   P  ++ L+S   L  N +   + +KE        L  T + L L    L  I
Sbjct: 172 --------PTEIEQLKSLKNLDLNHNELTTVSKE------VMLLETLENLDLRSNKLKTI 217

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P EI +   +  L L+ N +  LP E+    +L+TL L  N+ +  P  IL   + L   
Sbjct: 218 PKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQILPVEILELKNLLELN 277

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
              N  L + P +    +  L+ L L +N I +LP     + LP LQEL+L   ++   P
Sbjct: 278 LYYNQ-LVEFPKE-VGQLKSLKYLSLYHNQITTLP--VEVTQLPDLQELHLSGNKITILP 333

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +IL+L+ L  L LS N L ++P+    L  L  L+L +N ++ LP E+  L+ +LQ L 
Sbjct: 334 KEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK-NLQRLE 392

Query: 391 LDGNPL 396
           LD NP+
Sbjct: 393 LDSNPI 398



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 153/328 (46%), Gaps = 43/328 (13%)

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
            L  LP ++G+L  L  LDL  N+      E  QL+ L  L+L+NN L+ LP EIG++  
Sbjct: 52  GLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQN 111

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L++L L  N        LVN P                  E    K              
Sbjct: 112 LQELSLHSN-------ELVNLP-----------------KEIGQFK------------NL 135

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L+L+   L+ +P EI +   + +L L  N +  LP E+    SL+ L L+ N++    
Sbjct: 136 QKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVS 195

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
             ++  L +L  L L +N L+ +P +  + +  L++L L+ N + SLP+      L +L+
Sbjct: 196 KEVML-LETLENLDLRSNKLKTIPKE-IRQLKSLKVLMLTGNQLTSLPKE--IEQLQNLK 251

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L L   + +  P +IL L+ L  L+L  N L   P+    L SL  L L  N I+ LP 
Sbjct: 252 TLNLGENRFQILPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPV 311

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTILD 405
           E+  L P LQ L L GN +  + + IL 
Sbjct: 312 EVTQL-PDLQELHLSGNKITILPKEILQ 338



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 110/211 (52%), Gaps = 12/211 (5%)

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
           V + +LS +G  L  +P++I +   + KLDL  N    L  E+     LQ L L+ NK+ 
Sbjct: 43  VRNLDLSFQG--LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYN-IASLPENPPFSS 312
             P  I   L +L  L L +N L  +P +   FK+   LQ L+L  N +  LP+      
Sbjct: 101 VLPKEI-GQLQNLQELSLHSNELVNLPKEIGQFKN---LQKLNLDNNKLTVLPK--EIGQ 154

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L +LQEL L   +L   PT+I +L+ L+ LDL+ N L ++ +    L +L  LDL  N +
Sbjct: 155 LQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKL 214

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             +P E+  L+ SL+ L L GN L S+ + I
Sbjct: 215 KTIPKEIRQLK-SLKVLMLTGNQLTSLPKEI 244


>gi|421108955|ref|ZP_15569484.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410005922|gb|EKO59704.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 400

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 174/396 (43%), Gaps = 65/396 (16%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+   KL  L N  I     L  L  S N L  +P+ IG L  L  L+L  N++ ++P 
Sbjct: 51  LDLSEQKLKTLPNE-IEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLTTLPK 109

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E Y+  N L+ LP E+G+L  L  L L +NQL     E  QL+ L  L L 
Sbjct: 110 EIGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMTLPKEIGQLKNLQTLYLW 169

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN L+ LP EIG++  L+   L  N L TL                    PE        
Sbjct: 170 NNQLTTLPKEIGQLKNLQVFELNNNQLTTL--------------------PEE------- 202

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                I     L V    L L    L+ +P EI +   +  LDL  N    LP E+    
Sbjct: 203 -----IGKLKNLQV----LELNNNQLTTLPKEIGQLKNLQWLDLGYNQFTILPEEIGKLK 253

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           +LQ L L  N+ K  P  I   L +L  L L +N  + +P +  K +  L++L L YN  
Sbjct: 254 NLQVLHLHDNQFKIIPKEI-GKLKNLQVLHLHDNQFKIIPKEIGK-LKNLKMLSLGYN-- 309

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
                                 Q +  P +I +LQ L+ L+L  N L ++P+  + L +L
Sbjct: 310 ----------------------QFKIIPKEIEQLQNLQWLNLDANQLTTLPKEIEQLQNL 347

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
            EL LS N    LP E+G L+ +L+ L L+ + L S
Sbjct: 348 QELYLSYNQFKTLPKEIGQLK-NLKKLYLNNHQLSS 382



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 148/319 (46%), Gaps = 42/319 (13%)

Query: 110 EACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 167
           EA Q  L + VLDLS   L  LP EI ++  L++L L+ N L+TL   +       +L+ 
Sbjct: 40  EAIQNPLDVRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLEL 99

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
           + ++L        +  KE       RL    +EL L    L+ +P+EI +   + +L L 
Sbjct: 100 IHNQL-------TTLPKE-----IGRLQ-NLQELYLNYNQLTILPNEIGQLKNLQRLHLF 146

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAI----------------------LTSL 265
            N +  LP E+    +LQTL L  N++   P  I                      +  L
Sbjct: 147 NNQLMTLPKEIGQLKNLQTLYLWNNQLTTLPKEIGQLKNLQVFELNNNQLTTLPEEIGKL 206

Query: 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 324
            +L  L+L+NN L  +P +    +  LQ LDL YN    LPE      L +LQ L+L   
Sbjct: 207 KNLQVLELNNNQLTTLPKE-IGQLKNLQWLDLGYNQFTILPE--EIGKLKNLQVLHLHDN 263

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
           Q +  P +I +L+ L++L L  N  + IP+    L +L  L L  N    +P E+  L+ 
Sbjct: 264 QFKIIPKEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLKMLSLGYNQFKIIPKEIEQLQ- 322

Query: 385 SLQALRLDGNPLRSIRRTI 403
           +LQ L LD N L ++ + I
Sbjct: 323 NLQWLNLDANQLTTLPKEI 341



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 7/221 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E   T  DL T A +  +  + L L    L  +P+EI +   + +L LS N ++ LP 
Sbjct: 28  QAEEPKTYMDL-TEAIQNPLDVRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPK 86

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    +L+ L L  N++   P  I   L +L  L L+ N L  +P++    +  LQ L 
Sbjct: 87  EIGQLQNLRVLELIHNQLTTLPKEI-GRLQNLQELYLNYNQLTILPNE-IGQLKNLQRLH 144

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N + +LP+      L +LQ LYL   QL   P +I +L+ L++ +L+ N L ++PE 
Sbjct: 145 LFNNQLMTLPK--EIGQLKNLQTLYLWNNQLTTLPKEIGQLKNLQVFELNNNQLTTLPEE 202

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
              L +L  L+L++N ++ LP E+G L+ +LQ L L  N  
Sbjct: 203 IGKLKNLQVLELNNNQLTTLPKEIGQLK-NLQWLDLGYNQF 242


>gi|417785421|ref|ZP_12433125.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409951286|gb|EKO05801.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 408

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 124/369 (33%), Positives = 174/369 (47%), Gaps = 41/369 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  +KL +L    I     L  L +  N L  +P+ IG L  L  L L  N++ ++P 
Sbjct: 57  LDLSRSKLKILPKE-IGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPE 115

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L   ++ NN L+ LP E+GKL  L  L+L  N+L     E  +L+ L  L LS
Sbjct: 116 EIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLS 175

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++ +LRKL L G           N P   L K                
Sbjct: 176 LNRLTILPEEIGQLESLRKLSLGGK----------NKPFTILPKE--------------- 210

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                IT    L    +EL L+   L+ +P EI +   +  LDL +N +  LP E+    
Sbjct: 211 -----ITQLQNL----QELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLK 261

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +L  L LS N++   P  I T L +L  L L+ N     P +       LQ+LDL  N +
Sbjct: 262 NLLVLDLSGNQLTILPKEI-TQLQNLQELNLEYNRFEAFPKE-ITQFQNLQVLDLYQNRL 319

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
             LPE      L +LQ+L+L R QL   P +I RLQ+L  L L  N L ++PE  K L +
Sbjct: 320 TILPE--EIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKN 377

Query: 362 LTELDLSDN 370
           L +L L +N
Sbjct: 378 LKKLYLHNN 386



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 171/372 (45%), Gaps = 66/372 (17%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S++ L  +P+ IG L  L  L+   N++ ++P  I    +L E ++ NN L+ LP E+G+
Sbjct: 60  SRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQ 119

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  L L++NQL     E  +L+ L  L+L  N L+ LP EIG++  L++L L+ N L
Sbjct: 120 LQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRL 179

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN-- 207
                               + LPE      S  K                LSL G N  
Sbjct: 180 --------------------TILPEEIGQLESLRK----------------LSLGGKNKP 203

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
            + +P EI +   + +L L  N +  LP E+    +L+ L L +N++   P  I   L +
Sbjct: 204 FTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEI-GQLKN 262

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L  L L  N L  +P +                          + L +LQEL L   +  
Sbjct: 263 LLVLDLSGNQLTILPKE-------------------------ITQLQNLQELNLEYNRFE 297

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
             P +I + Q L++LDL QN L  +PE    L +L +L LS N ++ LP E+G L+  L+
Sbjct: 298 AFPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQ-KLE 356

Query: 388 ALRLDGNPLRSI 399
           +L LD N L ++
Sbjct: 357 SLGLDHNQLATL 368



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 158/361 (43%), Gaps = 72/361 (19%)

Query: 68  CCSLAEFYMGNNA------LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 120
            CSL +F+   N        + L   L   +++  LDL  ++LK    E  QL+ L +L+
Sbjct: 22  VCSLTQFHAEENYTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILN 81

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
             NN L+ LP EIGK+  L++L L  N L T                    LPE      
Sbjct: 82  SENNQLTTLPKEIGKLQNLQELHLQNNQLTT--------------------LPEE----- 116

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                  I     L V    L L    L+ +P EI +   + +L+L  N +  LP E+  
Sbjct: 117 -------IGQLQNLKV----LHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGR 165

Query: 241 CASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
             +LQ L LS N++   P+ I  L SL  LS L   N P   +P +              
Sbjct: 166 LQNLQELYLSLNRLTILPEEIGQLESLRKLS-LGGKNKPFTILPKE-------------- 210

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
                       + L +LQEL+L+  +L   P +I +LQ LRILDL QN L  +P+    
Sbjct: 211 -----------ITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 259

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           L +L  LDLS N ++ LP E+  L+ +LQ L L+ N   +  + I       VL   +++
Sbjct: 260 LKNLLVLDLSGNQLTILPKEITQLQ-NLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNR 318

Query: 419 I 419
           +
Sbjct: 319 L 319



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 74/165 (44%), Gaps = 23/165 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ GN+LT+L    I     L EL    N     P+ I     L  LDL+QNR+  +P 
Sbjct: 266 LDLSGNQLTILPKE-ITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILPE 324

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I    +L + ++  N L+ LP E+G+L KL +L L  NQL                   
Sbjct: 325 EIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL------------------- 365

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
              + LP EI ++  L+KL L  NPL + +   +    P  + Y 
Sbjct: 366 ---ATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRKLLPQCIIYF 407


>gi|124002073|ref|ZP_01686927.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992539|gb|EAY31884.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 506

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 204/402 (50%), Gaps = 25/402 (6%)

Query: 2   SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 61
           +KL++    ++VL    IA  T L +L      L  +P  +G+L+ L +L L++N +  +
Sbjct: 85  AKLNLSYKHISVLPAE-IAGLTHLQKLDCMAIGLTILPPEVGALTNLYKLRLNRNELTIL 143

Query: 62  PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 120
           P+ I     L E Y+ +N LSAL AE+G L++L  L+L  N+L     E  +L +L  L+
Sbjct: 144 PAEIGNLTKLQELYITDNRLSALSAEIGNLTQLQKLELAVNRLVALPAEIGKLTQLKKLE 203

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           + +N L+ LP EI  +T+L +L +  N   TL + +    T + LK+L        D++ 
Sbjct: 204 VGSNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEI---GTLSNLKFLYVS-----DNQL 255

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
           +T   ++  + T      +EL +E   L A+P+EI     +  L L  N + ELP E+  
Sbjct: 256 ATLPSEIGNLTTL-----QELYIEENQLIALPAEIGTLQSLQLLHLQSNQLSELPTEIGL 310

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP--SDGFKDIPMLQILDLS 298
              L+ L L  N +   P+ I   L  L  L++  N L  +P   D  K+   L  LD+S
Sbjct: 311 VGDLRILCLEENLLTTLPNTI-GQLKCLEELRIWKNDLVALPLEIDSLKN---LHTLDIS 366

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
           +N +++ P     + L  LQ+L +    L + P +I +L +L  L+L  N+L S+P G  
Sbjct: 367 FNKLSTFP--LQITQLEGLQKLNVAENGLTDLPDEINQLVKLEELNLGGNNLTSLPAGLA 424

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            L  L  LDL  N +  LP E+  L  +LQ L L GN L +I
Sbjct: 425 KLQKLQNLDLRYNELEVLPSEVFAL-SNLQELNLMGNYLTTI 465



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 187/377 (49%), Gaps = 24/377 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT+L    I + T L EL  + N L+ +   IG+L++L +L+L  NR+++
Sbjct: 130 LYKLRLNRNELTILPAE-IGNLTKLQELYITDNRLSALSAEIGNLTQLQKLELAVNRLVA 188

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I     L +  +G+N L+ LPAE+  L+ L  L + +NQ      E   L  L  L
Sbjct: 189 LPAEIGKLTQLKKLEVGSNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEIGTLSNLKFL 248

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            +S+N L+ LP EIG +TTL++L +  N L  L + +    +  LL    ++L E     
Sbjct: 249 YVSDNQLATLPSEIGNLTTLQELYIEENQLIALPAEIGTLQSLQLLHLQSNQLSE----- 303

Query: 180 ASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                     + T + +    + L LE   L+ +P+ I +   + +L + +N +  LP E
Sbjct: 304 ----------LPTEIGLVGDLRILCLEENLLTTLPNTIGQLKCLEELRIWKNDLVALPLE 353

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           + S  +L TL +S NK+  +P  I T L  L  L +  N L  +P D    +  L+ L+L
Sbjct: 354 IDSLKNLHTLDISFNKLSTFPLQI-TQLEGLQKLNVAENGLTDLP-DEINQLVKLEELNL 411

Query: 298 -SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
              N+ SLP     + L  LQ L LR  +L   P+++  L  L+ L+L  N L +IP   
Sbjct: 412 GGNNLTSLP--AGLAKLQKLQNLDLRYNELEVLPSEVFALSNLQELNLMGNYLTTIPVEI 469

Query: 357 KNLTSLTELDLSDNNIS 373
             L  L  L L    IS
Sbjct: 470 TKLKKLQYLYLQHGLIS 486



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 1/113 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL+V  N LT L +  I     L EL    N L  +P  +  L +L  LDL  N +  
Sbjct: 383 LQKLNVAENGLTDLPDE-INQLVKLEELNLGGNNLTSLPAGLAKLQKLQNLDLRYNELEV 441

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 113
           +PS +    +L E  +  N L+ +P E+ KL KL  L L    + E  +E  +
Sbjct: 442 LPSEVFALSNLQELNLMGNYLTTIPVEITKLKKLQYLYLQHGLISEQELERVK 494


>gi|260788688|ref|XP_002589381.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
 gi|229274558|gb|EEN45392.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
          Length = 1697

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 207/472 (43%), Gaps = 60/472 (12%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           KLD+    LT +   +    T L  L  S N L  +PE +G L +L RLD   N + S+P
Sbjct: 17  KLDLSNQGLTSIPEEVF-DITDLEFLDVSNNKLTSIPEAVGRLQKLYRLDADYNTLTSLP 75

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
            +I     L   Y+ +N LS LP  + KL KL  L + +NQL  +    C L  L VL++
Sbjct: 76  QAIGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFPSGVCSLPNLEVLEV 135

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
           S N L   PP + K+  LR L + GN L  +   +   P   +L    ++L         
Sbjct: 136 SYNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSNNKLSTFPPGVEK 195

Query: 182 TTK-EDLITMATRLS-----VTS----KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 231
             K  +L     +L+     V S    + LS+   NLS  P  + +  ++ +L +  N +
Sbjct: 196 LQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNNNLSTFPPGVEKLQKLRELRIYGNQL 255

Query: 232 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 291
            E+PP +    +++ L +S N +  +P      L  L  L +++N L +VPS G   +P 
Sbjct: 256 TEVPPGVCLLPNIEWLSVSNNNLSTFPPGG-EKLQKLRELYINDNQLTEVPS-GVCSLPN 313

Query: 292 LQILDLSYN-IASLP--------------------ENP---------------------- 308
           L++L +  N I SLP                    E P                      
Sbjct: 314 LEVLGVGKNPIRSLPDYVTRLARLKTLSVPNCQLDEFPRQVLQLKTLEELYAGGCKFDIV 373

Query: 309 --PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                SL HL  L L +  L+  P+ +  L  LR + L  N   + PE    L ++ +LD
Sbjct: 374 PDEVGSLQHLWYLALDKNLLKTLPSTMSHLHNLREVYLDDNKFGTFPEVLCELPAMEKLD 433

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           +S NNI+ LP  L   +  L+ L + GNPL    + +  +GT A++ +LK +
Sbjct: 434 ISKNNITRLPTALHRAD-KLKHLDVSGNPLTYPPQDVCKQGTGAIMAFLKQE 484



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 171/387 (44%), Gaps = 54/387 (13%)

Query: 35   LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
            L  +PE +  ++ L  LD+  N++ SIP +I     L       N L++LP  +G L KL
Sbjct: 936  LTSIPEEVFDITDLEVLDVSNNKLTSIPEAIGRLQKLYRLDADGNMLTSLPQAIGSLQKL 995

Query: 95   GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
              L ++ NQL E     C L  L VL++ NN LS  PP + K+  L  L + G       
Sbjct: 996  IHLYIYDNQLTEVPSGVCSLPNLEVLNVYNNKLSTFPPGVEKLQKLGTLYING------- 1048

Query: 154  SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
                                              + +   L V    LS+    LS  P 
Sbjct: 1049 ----------------------------------VCLLPNLEV----LSVGNNKLSTFPP 1070

Query: 214  EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
             + +  ++ +L +  N + E+P  + S  +L+ L + +N I+  PD + T L+ L  L +
Sbjct: 1071 GVEKLQKLRELYIRDNQLTEVPSGVCSLPNLEVLSVGKNPIRRLPDYV-TRLARLKTLSV 1129

Query: 274  DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPT 331
             N    + P    + +  L+I++  Y      +  P    SL HLQ L L +  L+  P+
Sbjct: 1130 SNCQFAEFP----RQVQQLKIMEELYAGGCKFDIVPDEVGSLQHLQVLALDKNLLKTLPS 1185

Query: 332  DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
             +  L  LR + L  N   + PE    L ++ +LD+S NNI+ LP  L   +  L+ L +
Sbjct: 1186 TMSHLHNLREVYLDDNKFGTFPEVLCELPAMEKLDISKNNITRLPTALHRAD-KLKHLDV 1244

Query: 392  DGNPLRSIRRTILDRGTKAVLKYLKDK 418
             GNPL    + +  +GT A++ +LK +
Sbjct: 1245 SGNPLTYPPQDVCKQGTGAIMAFLKQE 1271



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 169/367 (46%), Gaps = 46/367 (12%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           LN  P+T+      ++LDL    + SIP  +     L    + NN L+++P  +G+L KL
Sbjct: 5   LNLQPQTVNGR---LKLDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAVGRLQKL 61

Query: 95  GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LD   N L         L +L+ L + +N LS LPP + K+  L KL +  N L    
Sbjct: 62  YRLDADYNTLTSLPQAIGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFP 121

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
           S + + P   +L+   ++LP                                      P 
Sbjct: 122 SGVCSLPNLEVLEVSYNKLPN------------------------------------FPP 145

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
            + +  ++  L ++ N + E+PP +    +L+ L +S NK+  +P  +   L  L  L +
Sbjct: 146 VVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSNNKLSTFPPGV-EKLQKLRELYI 204

Query: 274 DNNPLRQVPSDGFKDIPMLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
             N L +VPS G   +P L++L + + N+++ P  P    L  L+EL +   QL E P  
Sbjct: 205 YGNQLTEVPS-GVCSLPNLEVLSVYNNNLSTFP--PGVEKLQKLRELRIYGNQLTEVPPG 261

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
           +  L  +  L +S N+L + P G + L  L EL ++DN ++ +P  +  L P+L+ L + 
Sbjct: 262 VCLLPNIEWLSVSNNNLSTFPPGGEKLQKLRELYINDNQLTEVPSGVCSL-PNLEVLGVG 320

Query: 393 GNPLRSI 399
            NP+RS+
Sbjct: 321 KNPIRSL 327



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 156/355 (43%), Gaps = 56/355 (15%)

Query: 4    LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
            LDV  NKLT +    I     L  L A  N+L  +P+ IGSL +LI L ++ N++  +PS
Sbjct: 952  LDVSNNKLTSIPE-AIGRLQKLYRLDADGNMLTSLPQAIGSLQKLIHLYIYDNQLTEVPS 1010

Query: 64   SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
             +    +L    + NN LS  P  + KL KLGTL         Y    C L  L VL + 
Sbjct: 1011 GVCSLPNLEVLNVYNNKLSTFPPGVEKLQKLGTL---------YINGVCLLPNLEVLSVG 1061

Query: 123  NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS---RLPENEDSE 179
            NN LS  PP + K+  LR+L +  N L  + S + + P   +L   ++   RLP      
Sbjct: 1062 NNKLSTFPPGVEKLQKLRELYIRDNQLTEVPSGVCSLPNLEVLSVGKNPIRRLP------ 1115

Query: 180  ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                  D +T   RL    K LS+     +  P ++ +   + +L         +P E+ 
Sbjct: 1116 ------DYVTRLARL----KTLSVSNCQFAEFPRQVQQLKIMEELYAGGCKFDIVPDEVG 1165

Query: 240  SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            S   LQ L L +N +K  P + ++ L +L  + LD+N     P +   ++P ++ LD+S 
Sbjct: 1166 SLQHLQVLALDKNLLKTLP-STMSHLHNLREVYLDDNKFGTFP-EVLCELPAMEKLDISK 1223

Query: 300  NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            N                         +   PT + R  +L+ LD+S N L   P+
Sbjct: 1224 N------------------------NITRLPTALHRADKLKHLDVSGNPLTYPPQ 1254



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 24/153 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL A     + +P+ +GSL  L  L L +N + ++PS++S   +L E Y+ +N     
Sbjct: 360 LEELYAGGCKFDIVPDEVGSLQHLWYLALDKNLLKTLPSTMSHLHNLREVYLDDNKFGTF 419

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  L                       C+L  +  LD+S N+++ LP  + +   L+ L 
Sbjct: 420 PEVL-----------------------CELPAMEKLDISKNNITRLPTALHRADKLKHLD 456

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 176
           ++GNPL      +    T A++ +L+    ++E
Sbjct: 457 VSGNPLTYPPQDVCKQGTGAIMAFLKQEAEKDE 489



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 33/178 (18%)

Query: 24   MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
            ++ EL A     + +P+ +GSL  L  L L +N + ++PS++S   +L E Y+ +N    
Sbjct: 1146 IMEELYAGGCKFDIVPDEVGSLQHLQVLALDKNLLKTLPSTMSHLHNLREVYLDDNKFGT 1205

Query: 84   LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKL 142
             P  L                       C+L  +  LD+S N+++ LP  + +   L+ L
Sbjct: 1206 FPEVL-----------------------CELPAMEKLDISKNNITRLPTALHRADKLKHL 1242

Query: 143  LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 200
             ++GNPL      +    T A++ +L+         + +   E ++ +  RLSV + +
Sbjct: 1243 DVSGNPLTYPPQDVCKQGTGAIMAFLK---------QEAEKDERILRVFNRLSVKASQ 1291



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 1/113 (0%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
            M +L   G K  ++ +  + S   L  L   KNLL  +P T+  L  L  + L  N+  +
Sbjct: 1147 MEELYAGGCKFDIVPDE-VGSLQHLQVLALDKNLLKTLPSTMSHLHNLREVYLDDNKFGT 1205

Query: 61   IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 113
             P  +    ++ +  +  N ++ LP  L +  KL  LD+  N L     + C+
Sbjct: 1206 FPEVLCELPAMEKLDISKNNITRLPTALHRADKLKHLDVSGNPLTYPPQDVCK 1258


>gi|456825485|gb|EMF73881.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 405

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 124/369 (33%), Positives = 174/369 (47%), Gaps = 41/369 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  +KL +L    I     L  L +  N L  +P+ IG L  L  L L  N++ ++P 
Sbjct: 54  LDLSRSKLKILPKE-IGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPE 112

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L   ++ NN L+ LP E+GKL  L  L+L  N+L     E  +L+ L  L LS
Sbjct: 113 EIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLS 172

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++ +LRKL L G           N P   L K                
Sbjct: 173 LNRLTILPEEIGQLESLRKLSLGGK----------NKPFTILPKE--------------- 207

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                IT    L    +EL L+   L+ +P EI +   +  LDL +N +  LP E+    
Sbjct: 208 -----ITQLQNL----QELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLK 258

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +L  L LS N++   P  I T L +L  L L+ N     P +       LQ+LDL  N +
Sbjct: 259 NLLVLDLSGNQLTILPKEI-TQLQNLQELNLEYNRFEAFPKE-ITQFQNLQVLDLYQNRL 316

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
             LPE      L +LQ+L+L R QL   P +I RLQ+L  L L  N L ++PE  K L +
Sbjct: 317 TILPE--EIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKN 374

Query: 362 LTELDLSDN 370
           L +L L +N
Sbjct: 375 LKKLYLHNN 383



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 178/393 (45%), Gaps = 76/393 (19%)

Query: 20  ASWTMLTELIA----------SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 69
            S+T LTE +           S++ L  +P+ IG L  L  L+   N++ ++P  I    
Sbjct: 36  GSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQ 95

Query: 70  SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 128
           +L E ++ NN L+ LP E+G+L  L  L L++NQL     E  +L+ L  L+L  N L+ 
Sbjct: 96  NLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNI 155

Query: 129 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 188
           LP EIG++  L++L L+ N L                    + LPE      S  K    
Sbjct: 156 LPKEIGRLQNLQELYLSLNRL--------------------TILPEEIGQLESLRK---- 191

Query: 189 TMATRLSVTSKELSLEGMN--LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
                       LSL G N   + +P EI +   + +L L  N +  LP E+    +L+ 
Sbjct: 192 ------------LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRI 239

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 306
           L L +N++   P  I   L +L  L L  N L  +P +                      
Sbjct: 240 LDLYQNRLTILPKEI-GQLKNLLVLDLSGNQLTILPKE---------------------- 276

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
               + L +LQEL L   +    P +I + Q L++LDL QN L  +PE    L +L +L 
Sbjct: 277 ---ITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLH 333

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LS N ++ LP E+G L+  L++L LD N L ++
Sbjct: 334 LSRNQLTTLPKEIGRLQ-KLESLGLDHNQLATL 365



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 159/358 (44%), Gaps = 69/358 (19%)

Query: 68  CCSLAEFYMGNN---ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 123
            CSL +F+   N   + + L   L   +++  LDL  ++LK    E  QL+ L +L+  N
Sbjct: 22  VCSLTQFHAEENHKGSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSEN 81

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N L+ LP EIGK+  L++L L  N L T                    LPE         
Sbjct: 82  NQLTTLPKEIGKLQNLQELHLQNNQLTT--------------------LPEE-------- 113

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
               I     L V    L L    L+ +P EI +   + +L+L  N +  LP E+    +
Sbjct: 114 ----IGQLQNLKV----LHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQN 165

Query: 244 LQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
           LQ L LS N++   P+ I  L SL  LS L   N P   +P +                 
Sbjct: 166 LQELYLSLNRLTILPEEIGQLESLRKLS-LGGKNKPFTILPKE----------------- 207

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
                    + L +LQEL+L+  +L   P +I +LQ LRILDL QN L  +P+    L +
Sbjct: 208 --------ITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKN 259

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           L  LDLS N ++ LP E+  L+ +LQ L L+ N   +  + I       VL   ++++
Sbjct: 260 LLVLDLSGNQLTILPKEITQLQ-NLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRL 316



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 74/165 (44%), Gaps = 23/165 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ GN+LT+L    I     L EL    N     P+ I     L  LDL+QNR+  +P 
Sbjct: 263 LDLSGNQLTILPKE-ITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILPE 321

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I    +L + ++  N L+ LP E+G+L KL +L L  NQL                   
Sbjct: 322 EIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL------------------- 362

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
              + LP EI ++  L+KL L  NPL + +   +    P  + Y 
Sbjct: 363 ---ATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRKLLPQCIIYF 404


>gi|24215665|ref|NP_713146.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074857|ref|YP_005989175.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196830|gb|AAN50164.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458647|gb|AER03192.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 408

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 123/369 (33%), Positives = 175/369 (47%), Gaps = 41/369 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  +KL +L    I     L  L +  N L  +P+ IG L  L  L L  N++ ++P 
Sbjct: 57  LDLSRSKLKILPKE-IGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPE 115

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L   ++ NN L+ LP E+GKL  L  L+L  N+L     E  +L+ L  L LS
Sbjct: 116 EIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLS 175

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++ +LRKL L G           N P   L K                
Sbjct: 176 LNRLTILPEEIGQLESLRKLSLGGK----------NKPFTILPKE--------------- 210

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                IT    L    +EL L+   L+ +P EI +   +  LDL +N +  LP E+    
Sbjct: 211 -----ITQLQNL----QELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLK 261

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +L  L LS N++   P  I T L +L  L L+ N     P +       LQ+LDL  N +
Sbjct: 262 NLLVLDLSGNQLTILPKEI-TQLQNLQELNLEYNRFEAFPKE-ITQFQNLQVLDLYQNRL 319

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
            +LP+      L +LQ+L+L R QL   P +I RLQ+L  L L  N L ++PE  K L +
Sbjct: 320 TTLPK--EIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKN 377

Query: 362 LTELDLSDN 370
           L +L L +N
Sbjct: 378 LKKLYLHNN 386



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 172/372 (46%), Gaps = 66/372 (17%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S++ L  +P+ IG L  L  L+   N++ ++P  I    +L E ++ NN L+ LP E+G+
Sbjct: 60  SRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQ 119

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  L L++NQL     E  +L+ L  L+L  N L+ LP EIG++  L++L L+ N L
Sbjct: 120 LQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRL 179

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN-- 207
                               + LPE      S  K                LSL G N  
Sbjct: 180 --------------------TILPEEIGQLESLRK----------------LSLGGKNKP 203

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
            + +P EI +   + +L L  N +  LP E+    +L+ L L +N++   P  I   L +
Sbjct: 204 FTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEI-GQLKN 262

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L  L L  N L  +P +                          + L +LQEL L   +  
Sbjct: 263 LLVLDLSGNQLTILPKE-------------------------ITQLQNLQELNLEYNRFE 297

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
             P +I + Q L++LDL QN L ++P+    L +L +L LS N ++ LP E+G L+  L+
Sbjct: 298 AFPKEITQFQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQ-KLE 356

Query: 388 ALRLDGNPLRSI 399
           +L LD N L ++
Sbjct: 357 SLGLDHNQLATL 368



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 158/361 (43%), Gaps = 72/361 (19%)

Query: 68  CCSLAEFYMGNNA------LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 120
            CSL +F+   N        + L   L   +++  LDL  ++LK    E  QL+ L +L+
Sbjct: 22  VCSLTQFHAEENHTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILN 81

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
             NN L+ LP EIGK+  L++L L  N L T                    LPE      
Sbjct: 82  SENNQLTTLPKEIGKLQNLQELHLQNNQLTT--------------------LPEE----- 116

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                  I     L V    L L    L+ +P EI +   + +L+L  N +  LP E+  
Sbjct: 117 -------IGQLQNLKV----LHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGR 165

Query: 241 CASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
             +LQ L LS N++   P+ I  L SL  LS L   N P   +P +              
Sbjct: 166 LQNLQELYLSLNRLTILPEEIGQLESLRKLS-LGGKNKPFTILPKE-------------- 210

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
                       + L +LQEL+L+  +L   P +I +LQ LRILDL QN L  +P+    
Sbjct: 211 -----------ITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 259

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           L +L  LDLS N ++ LP E+  L+ +LQ L L+ N   +  + I       VL   +++
Sbjct: 260 LKNLLVLDLSGNQLTILPKEITQLQ-NLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNR 318

Query: 419 I 419
           +
Sbjct: 319 L 319



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 23/165 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ GN+LT+L    I     L EL    N     P+ I     L  LDL+QNR+ ++P 
Sbjct: 266 LDLSGNQLTILPKE-ITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPK 324

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I    +L + ++  N L+ LP E+G+L KL +L L  NQL                   
Sbjct: 325 EIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL------------------- 365

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
              + LP EI ++  L+KL L  NPL + +   +    P  + Y 
Sbjct: 366 ---ATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRKLLPQCIIYF 407


>gi|456825507|gb|EMF73903.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 588

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 135/435 (31%), Positives = 200/435 (45%), Gaps = 41/435 (9%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G   T L    I     L  L    N L  +P  IG L  L +L+L +NR+  +P 
Sbjct: 55  LNLSGQNFTTLPKE-IEKLKNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPK 113

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    + +N L+ LP E+G+L  L TL L  NQL  +  E  QL  L  L+L 
Sbjct: 114 EIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLK 173

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL----------------RSSLVNGPTP-ALL 165
            N L+ LP EIG++  L  L L+ N L T                 R+ L   P     L
Sbjct: 174 WNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQL 233

Query: 166 KYLRS-RLPENEDSEAS-------------TTKEDLITMATRLSVTSK--ELSLEGMNLS 209
           K L+   L  N+    S              +   L T+   +    K  +LSL    L+
Sbjct: 234 KNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLT 293

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P EI +   +  LDL  N +  LP E+    +L  L L RN++  +P  I   L +L 
Sbjct: 294 TLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEI-GQLENLQ 352

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
            L L NN L  +P +    +  L+ L+LS N + + P+      L  LQ+L L   +L  
Sbjct: 353 ELDLWNNRLTALPKE-IGQLKNLENLELSENQLTTFPK--EIGQLKKLQDLGLSYNRLVI 409

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
            P +I +L+ L+ L LS N L ++P+    L +L  L+LS+N ++ LP E+G L+ +LQ 
Sbjct: 410 LPKEIGQLKNLQTLSLSYNRLTTLPKEIGQLKNLENLELSENRLATLPKEIGQLQ-NLQK 468

Query: 389 LRLDGNPLRSIRRTI 403
           L LD N   +  + I
Sbjct: 469 LDLDTNRFATFPKEI 483



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 189/405 (46%), Gaps = 21/405 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  N+LT      I     L EL    N L  +P+ IG L  L  L+L +N++ +
Sbjct: 144 LQTLGLSENQLTTFPKE-IGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTT 202

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVL 119
            P  I     L +  +G N L+  P E+G+L  L  LDL  NQ K    E      L  L
Sbjct: 203 FPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQL 262

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +LS N L+ LP EIG++  L+ L L  N L TL         P  +  L++    +  + 
Sbjct: 263 NLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTL---------PKEIGQLKNLYNLDLGTN 313

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             TT    I     L      L L    L+  P EI +   + +LDL  N +  LP E+ 
Sbjct: 314 QLTTLPKEIGQLKNLY----NLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIG 369

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+ L LS N++  +P  I   L  L  L L  N L  +P +    +  LQ L LSY
Sbjct: 370 QLKNLENLELSENQLTTFPKEI-GQLKKLQDLGLSYNRLVILPKE-IGQLKNLQTLSLSY 427

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N + +LP+      L +L+ L L   +L   P +I +LQ L+ LDL  N   + P+    
Sbjct: 428 NRLTTLPK--EIGQLKNLENLELSENRLATLPKEIGQLQNLQKLDLDTNRFATFPKEIGQ 485

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L +L  LDL +N ++ALP E+  L+ +L  L L+ N L ++ + I
Sbjct: 486 LQNLYNLDLGNNQLTALPKEIAQLK-NLYDLDLNTNQLTTLPKEI 529



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 180/391 (46%), Gaps = 38/391 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++  N+LT      I     L +L   +N L   P+ IG L  L  LDL  N+  +
Sbjct: 190 LENLELSENQLTTFPKE-IGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKT 248

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +   I    +L +  +  N L+ LPAE+G+L KL  L L  NQL     E  QL+ L  L
Sbjct: 249 VSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNL 308

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL  N L+ LP EIG++  L  L L  N L T          P  +  L +         
Sbjct: 309 DLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTF---------PKEIGQLENL-------- 351

Query: 180 ASTTKEDLITMATRLSVTSKEL----SLEGMNLS-----AIPSEIWEAGEITKLDLSRNS 230
                ++L     RL+   KE+    +LE + LS       P EI +  ++  L LS N 
Sbjct: 352 -----QELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNR 406

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           +  LP E+    +LQTL LS N++   P  I   L +L  L+L  N L  +P +    + 
Sbjct: 407 LVILPKEIGQLKNLQTLSLSYNRLTTLPKEI-GQLKNLENLELSENRLATLPKE-IGQLQ 464

Query: 291 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
            LQ LDL  N  A+ P+      L +L  L L   QL   P +I +L+ L  LDL+ N L
Sbjct: 465 NLQKLDLDTNRFATFPK--EIGQLQNLYNLDLGNNQLTALPKEIAQLKNLYDLDLNTNQL 522

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELG 380
            ++P+    L +L  L L  N ++ LP E+G
Sbjct: 523 TTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 553



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 121/237 (51%), Gaps = 11/237 (4%)

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
           +++  PE+E      T  DL T A +  +  + L+L G N + +P EI +   +  L+L 
Sbjct: 27  IQAEAPEDEPG----TYRDL-TKALQNPLNVRVLNLSGQNFTTLPKEIEKLKNLQTLNLQ 81

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            N +  LP E+    +L+ L L +N++   P  I   L +L  L L +N L  +P +   
Sbjct: 82  DNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEI-GQLQNLQTLNLQDNQLATLPVE-IG 139

Query: 288 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
            +  LQ L LS N + + P+      L +LQEL L+  +L   P +I +L+ L  L+LS+
Sbjct: 140 QLQNLQTLGLSENQLTTFPK--EIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSE 197

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           N L + P+    L  L +L L  N ++  P E+G L+ +LQ L L  N  +++ + I
Sbjct: 198 NQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLK-NLQMLDLCYNQFKTVSKEI 253



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 81/150 (54%), Gaps = 2/150 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  N+LT L    I     L  L  S+N L  +P+ IG L  L +LDL  NR  +
Sbjct: 420 LQTLSLSYNRLTTLPKE-IGQLKNLENLELSENRLATLPKEIGQLQNLQKLDLDTNRFAT 478

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
            P  I    +L    +GNN L+ALP E+ +L  L  LDL++NQL     E  QL+ L  L
Sbjct: 479 FPKEIGQLQNLYNLDLGNNQLTALPKEIAQLKNLYDLDLNTNQLTTLPKEIGQLKNLYNL 538

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
            L  N L+ LP EIG++  L+ LLL+ NP+
Sbjct: 539 GLGTNQLTTLPKEIGQLKKLQWLLLSVNPI 568


>gi|421127514|ref|ZP_15587738.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410435604|gb|EKP84736.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 470

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 131/400 (32%), Positives = 193/400 (48%), Gaps = 21/400 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+LTVL    I     L  L    N L  +P  I  L  L  LDL  N++  
Sbjct: 72  LQRLYLHYNQLTVLPQE-IEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTV 130

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L   Y+ +N L+ LP E+ +L  L  LDL SNQL     E  QL+ L +L
Sbjct: 131 LPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLL 190

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +N L+ LP EI ++  L+ L L  N L  L   +       LL YL S       + 
Sbjct: 191 YLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLL-YLHS-------NR 242

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            +T  +D+  +        K L L    L+ +P+EI +   +  L LS N     P E+ 
Sbjct: 243 LTTLSKDIEQLQ-----NLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIG 297

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +  L+ LDLSY
Sbjct: 298 QLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQLKNLKSLDLSY 355

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L LS N L ++P+    
Sbjct: 356 NQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQ 413

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L +L  L L  N ++ LP E+  L+ +LQ L L+ N   S
Sbjct: 414 LQNLLWLSLVYNQLTTLPNEIEQLK-NLQTLYLNNNQFSS 452



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 178/355 (50%), Gaps = 20/355 (5%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 52  LDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE 111

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL         P  ++ L+
Sbjct: 112 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTL---------PNEIEQLK 162

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           +    +  S   T     I     L +    L L    L+ +P+EI +   +  LDL  N
Sbjct: 163 NLQVLDLGSNQLTVLPQEIEQLKNLQL----LYLRSNRLTTLPNEIEQLKNLQVLDLGSN 218

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP E+    +LQ L L  N++      I   L +L  L L NN L  +P++  + +
Sbjct: 219 QLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI-EQLQNLKSLDLSNNQLTTLPNE-IEQL 276

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L+ L LS N  A+ P+      L +L+ L+L   Q+   P +I +L++L+ L LS N 
Sbjct: 277 KNLKSLYLSENQFATFPK--EIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ 334

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L ++P+  + L +L  LDLS N ++ LP E+G LE +LQ L L  N L+++ + I
Sbjct: 335 LITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLE-NLQTLDLRNNQLKTLPKEI 388



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 140/285 (49%), Gaps = 21/285 (7%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RL 172
           L + VLDLS   L  LP EIG++  L++L L  N L  L   +       LL YLRS RL
Sbjct: 47  LEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL-YLRSNRL 105

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
                    TT  + I     L V    L L    L+ +P EI +   +  L L  N + 
Sbjct: 106 ---------TTLPNEIEQLKNLQV----LDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLT 152

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            LP E+    +LQ L L  N++   P  I   L +L  L L +N L  +P++  + +  L
Sbjct: 153 TLPNEIEQLKNLQVLDLGSNQLTVLPQEI-EQLKNLQLLYLRSNRLTTLPNE-IEQLKNL 210

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           Q+LDL  N +  LP+      L +LQ LYL   +L     DI +LQ L+ LDLS N L +
Sbjct: 211 QVLDLGSNQLTVLPQ--EIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 268

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           +P   + L +L  L LS+N  +  P E+G L+ +L+ L L+ N +
Sbjct: 269 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQ-NLKVLFLNNNQI 312


>gi|380011078|ref|XP_003689640.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Apis florea]
          Length = 610

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 128/406 (31%), Positives = 180/406 (44%), Gaps = 50/406 (12%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
           RLDL ++ I  +PS++     L EFY+  N L  LP E+G L  L TL L  N L     
Sbjct: 133 RLDLSKSNITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLGNLETLALSENSLTSLPN 192

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
               L+ L VLDL +N LS +P  + K+T L  L L  N +R +  ++ N     +L   
Sbjct: 193 TLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTMLS-- 250

Query: 169 RSRLPENEDSEASTTKEDLITMATRLSVTSKEL----------------SLEGMNLSAIP 212
              L EN+  E       LI + T   V+   L                 L+   L  IP
Sbjct: 251 ---LRENKIRELPAGIGKLINLIT-FDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIP 306

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
             I     +T+L L  N +  +P  L++C  +    +  N++   PD +L SLS L+ + 
Sbjct: 307 DTIGNLISLTRLGLRYNRLTNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTIT 366

Query: 273 LDNNPLRQVPSDG---FKDIPML-----QILDLSYNIASLPEN--------PPFSSLP-- 314
           L  N     PS G   F ++  +     +I  + Y I S  +N           ++LP  
Sbjct: 367 LSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQLTALPLD 426

Query: 315 -----HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
                ++ EL L   QL + P DI  LQ L +L LS N L+ IP    NL  L  LDL +
Sbjct: 427 IGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEE 486

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           N I +LP E+G L   LQ L L  N + S+ R I   G    L YL
Sbjct: 487 NKIESLPNEIGFLR-DLQKLILQSNQVTSLPRAI---GHLTNLTYL 528



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 204/429 (47%), Gaps = 24/429 (5%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N LT L N L  +   L  L    N L+ +P+ +  L+ L  L L  NR+  +  +I   
Sbjct: 185 NSLTSLPNTL-ENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSDNIRNL 243

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLS 127
            +L    +  N +  LPA +GKL  L T D+  N L+    E    ++LS LDL +N L 
Sbjct: 244 TNLTMLSLRENKIRELPAGIGKLINLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELL 303

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            +P  IG + +L +L L  N L  +  SL N           +++ +  D   ++   DL
Sbjct: 304 DIPDTIGNLISLTRLGLRYNRLTNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLS-DL 362

Query: 188 ITMA-TRLSVTS------------KELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQE 233
            T+  +R + T+              ++LE   +  IP  I+  A  + KL++  N +  
Sbjct: 363 TTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQLTA 422

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP ++ +  ++  L L  N++   PD I   L +L  L L NN L+++P+    ++  L+
Sbjct: 423 LPLDIGTWINMVELNLGTNQLTKIPDDI-QCLQNLEVLILSNNLLKRIPA-SIANLRKLR 480

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
           +LDL  N I SLP    F  L  LQ+L L+  Q+   P  I  L  L  L + +N+L  +
Sbjct: 481 VLDLEENKIESLPNEIGF--LRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYL 538

Query: 353 PEGFKNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAV 411
           PE    L +L  L ++DN N+  LP EL L   +L  + ++  PL  I   I+  G   V
Sbjct: 539 PEEIGTLENLDSLYVNDNANLHNLPFELALC-TNLSIMSIENCPLSQIPPEIVAGGPSLV 597

Query: 412 LKYLKDKIP 420
           +++LK + P
Sbjct: 598 IQFLKMQGP 606



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 13/217 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E NK+  +   + +    L +L   +N L  +P  IG+   ++ L+L  N++  IP 
Sbjct: 389 INLEHNKIDKIPYGIFSRAKNLAKLNMKENQLTALPLDIGTWINMVELNLGTNQLTKIPD 448

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    + NN L  +PA +  L KL  LDL  N+++    E   LR L  L L 
Sbjct: 449 DIQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEENKIESLPNEIGFLRDLQKLILQ 508

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N ++ LP  IG +T L  L +  N L  L   +        L+ L S L  N+++    
Sbjct: 509 SNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEI------GTLENLDS-LYVNDNANLHN 561

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 219
              +L  + T LS+    +S+E   LS IP EI   G
Sbjct: 562 LPFEL-ALCTNLSI----MSIENCPLSQIPPEIVAGG 593



 Score = 42.0 bits (97), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           R + L  LDLS++++  +P   ++LT L E  L  N +  LPPE+G L  +L+ L L  N
Sbjct: 127 REECLERLDLSKSNITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCL-GNLETLALSEN 185

Query: 395 PLRSIRRTILDRGTKAVLKYLKDKIPE 421
            L S+  T+ +  +  VL    +K+ E
Sbjct: 186 SLTSLPNTLENLKSLRVLDLRHNKLSE 212


>gi|418707299|ref|ZP_13268125.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772346|gb|EKR47534.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 400

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 174/373 (46%), Gaps = 43/373 (11%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           LI S+  L  +P+ I  L  L  LDL  N++ ++P  I    +L    +  N L+ALP E
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 146
           +G+L  L  L L++NQL     E  QL+ L +LDL NN L+ LP EIGK+  L+ L L  
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYE 170

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
           + L  L   +  G    L                                   EL L   
Sbjct: 171 SQLTILPQEI--GKLQNL----------------------------------HELDLSHN 194

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            L+ +P EI +   + +  L  N +  LP E+    +L  L L  N++   P  I   L 
Sbjct: 195 QLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEI-GQLQ 253

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
           +L    LDNN    +P +    +  LQ L LSYN + + P+      L  LQ L L   Q
Sbjct: 254 NLQRFVLDNNQFTILPKE-IGQLQNLQELYLSYNQLTTFPK--EIGKLQKLQTLNLWNNQ 310

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L   P +I +L+ L+ L+LS+N L++IP+    L +L  LDLS+N ++ LP E+  L+ +
Sbjct: 311 LTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEIEQLK-N 369

Query: 386 LQALRLDGNPLRS 398
           LQ L L  N   S
Sbjct: 370 LQTLNLWNNQFSS 382



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 173/361 (47%), Gaps = 55/361 (15%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L L + ++ ++P  I    +L    +G+N L+ALP E+G+L  L  L L+ NQL     E
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L VL L+NN L+ LP EI ++  L+ L L  N L TL   +       LL    
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYE 170

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           S+L                                    + +P EI +   + +LDLS N
Sbjct: 171 SQL------------------------------------TILPQEIGKLQNLHELDLSHN 194

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP E+    +LQ  +L  N++   P  I   L +L  L L +N L  +P    K+I
Sbjct: 195 QLTILPKEIGQLQNLQRFVLDNNQLTILPKEI-GKLQNLHELYLGHNQLTILP----KEI 249

Query: 290 PMLQILDLSYNIASLPENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLRIL 342
             LQ L        + +N  F+ LP       +LQELYL   QL   P +I +LQ+L+ L
Sbjct: 250 GQLQNLQ-----RFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTL 304

Query: 343 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRT 402
           +L  N L ++PE  + L +L  L+LS+N +  +P E+G L+ +L++L L  N L ++ + 
Sbjct: 305 NLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQ-NLKSLDLSNNQLTTLPKE 363

Query: 403 I 403
           I
Sbjct: 364 I 364



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 164/376 (43%), Gaps = 64/376 (17%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+LT L    I     L  LI   N L  +P+ IG L  L  L L+ N++ ++P+
Sbjct: 74  LDLGHNQLTALPKE-IGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPT 132

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    +GNN L+ LP E+GKL  L  L L+ +QL     E  +L+ L  LDLS
Sbjct: 133 EIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLS 192

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N L+ LP EIG++  L++ +L  N L  L   +  G    L                  
Sbjct: 193 HNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEI--GKLQNL------------------ 232

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                            EL L    L+ +P EI +   + +  L  N    LP E+    
Sbjct: 233 ----------------HELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQ 276

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           +LQ L LS N++  +P  I   L  L  L L NN L  +P +                  
Sbjct: 277 NLQELYLSYNQLTTFPKEI-GKLQKLQTLNLWNNQLTTLPEE------------------ 317

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
                     L +L+ L L   QL+  P +I +LQ L+ LDLS N L ++P+  + L +L
Sbjct: 318 -------IEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEIEQLKNL 370

Query: 363 TELDLSDNNISALPPE 378
             L+L +N  S+   E
Sbjct: 371 QTLNLWNNQFSSQEKE 386



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 123/247 (49%), Gaps = 17/247 (6%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E   T +DL T A +  +  + L L    L+ +P EI +   +  LDL  N +  LP 
Sbjct: 28  QAEEPGTYQDL-TKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPK 86

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    +LQ LIL  N++   P  I   L +L  L L+NN L  +P++  + +  LQ+LD
Sbjct: 87  EIGQLKNLQLLILYYNQLTALPKEI-GQLKNLKVLFLNNNQLTTLPTE-IRQLKNLQMLD 144

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N + +LP+      L +LQ L L   QL   P +I +LQ L  LDLS N L  +P+ 
Sbjct: 145 LGNNQLTTLPK--EIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKE 202

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN----------PLRSIRRTILD 405
              L +L    L +N ++ LP E+G L+ +L  L L  N           L++++R +LD
Sbjct: 203 IGQLQNLQRFVLDNNQLTILPKEIGKLQ-NLHELYLGHNQLTILPKEIGQLQNLQRFVLD 261

Query: 406 RGTKAVL 412
                +L
Sbjct: 262 NNQFTIL 268



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 81/153 (52%), Gaps = 2/153 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +  ++ N+LT+L    I     L EL    N L  +P+ IG L  L R  L  N+   
Sbjct: 209 LQRFVLDNNQLTILPKE-IGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTI 267

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+  N L+  P E+GKL KL TL+L +NQL     E  QL+ L  L
Sbjct: 268 LPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTL 327

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           +LS N L  +P EIG++  L+ L L+ N L TL
Sbjct: 328 NLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTL 360



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 7/144 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +  ++ N+ T+L    I     L EL  S N L   P+ IG L +L  L+L  N++ +
Sbjct: 255 LQRFVLDNNQFTILPKE-IGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTT 313

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    +  N L  +P E+G+L  L +LDL +NQL     E  QL+ L  L
Sbjct: 314 LPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEIEQLKNLQTL 373

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL 143
           +L NN  S    E      +RKLL
Sbjct: 374 NLWNNQFSSQEKE-----KIRKLL 392


>gi|428174569|gb|EKX43464.1| hypothetical protein GUITHDRAFT_87793 [Guillardia theta CCMP2712]
          Length = 622

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 122/383 (31%), Positives = 186/383 (48%), Gaps = 44/383 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             ++  L  L  + N L  +   IG +  L R++L +N+I+SIP       +L+E  +  
Sbjct: 200 FGNFKALHHLDLAGNQLEALAPEIGHVISLSRVNLARNKIVSIPFEWGLLSNLSELDLSG 259

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL---RLSVLDLSNNSLSGLPPEI-G 134
           N +S++P ELG+L+ L  L +  N L       C L   R  V+  SNN L+ LPP +  
Sbjct: 260 NPISSIPQELGQLTALECLHVDRNPLTSLPRSLCHLTNLRDLVVQFSNNRLTSLPPSLFD 319

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            M +LRKLL   N +  L  ++ +  T  L           +D++ S+  + L  +    
Sbjct: 320 GMKSLRKLLANNNRISRLPDNVSSLTTLQLFNL--------DDNQISSLPDSLCLLYDL- 370

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
               + LSL    L++IP +      +   +LS N +Q LP  LSS  SLQTL +  NKI
Sbjct: 371 ----QTLSLSHNELTSIPDQFGLLTGLVSCNLSSNKLQGLPASLSSLVSLQTLNVQENKI 426

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 314
           K  PD   + L+SL  L LDNN              ++++L           +P  S L 
Sbjct: 427 KSLPDNC-SRLTSLRSLNLDNN--------------VIELL-----------SPEISQLK 460

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
            LQ L +R  +LR  P +I +L+QLR LDL +N L  +P     LTS+  L L  N++ +
Sbjct: 461 VLQTLRMRHNKLRTLPWEIAQLEQLRHLDLGENRLMQLPAVVGTLTSVVSLLLDKNSLES 520

Query: 375 LPPELGLLEPSLQALRLDGNPLR 397
           LP  +G L  +L+ L L+ N L+
Sbjct: 521 LPNSIGDLT-NLEKLCLEDNQLQ 542



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 184/404 (45%), Gaps = 58/404 (14%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N L   P ++ SL  L  L+L  N+++ IP +I    S+   ++ NN L  +  E+G+
Sbjct: 49  SNNDLVEFPSSLRSLKLLHTLELDANQLVKIPPAIGEFQSMKSLFLHNNCLVQIAPEIGQ 108

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS-NNSLSGLPPEIGKMTTLRKLLLT-GN 147
           L  L  L L  N+L E  +E C    L+ L+L  NN L  LP ++G++T L +L +  GN
Sbjct: 109 LGNLKVLLLQGNRLHEVPLELCSCTALTTLNLQDNNKLQSLPMKVGRLTGLTRLFIADGN 168

Query: 148 PLRTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
            L +L         PA   Y+ +     L +N  S+  +   +   +          L L
Sbjct: 169 LLDSL---------PASFSYIETLTHLSLADNNISDIPSDFGNFKAL--------HHLDL 211

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
            G  L A+  EI     +++++L+RN I  +P E    ++L  L LS N I   P   L 
Sbjct: 212 AGNQLEALAPEIGHVISLSRVNLARNKIVSIPFEWGLLSNLSELDLSGNPISSIPQE-LG 270

Query: 264 SLSSLSCLKLDNNPLRQVPS----------------------------DGFKDIPMLQIL 295
            L++L CL +D NPL  +P                             DG K +   ++L
Sbjct: 271 QLTALECLHVDRNPLTSLPRSLCHLTNLRDLVVQFSNNRLTSLPPSLFDGMKSLR--KLL 328

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
             +  I+ LP+N   SSL  LQ   L   Q+   P  +  L  L+ L LS N L SIP+ 
Sbjct: 329 ANNNRISRLPDN--VSSLTTLQLFNLDDNQISSLPDSLCLLYDLQTLSLSHNELTSIPDQ 386

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           F  LT L   +LS N +  LP  L  L  SLQ L +  N ++S+
Sbjct: 387 FGLLTGLVSCNLSSNKLQGLPASLSSL-VSLQTLNVQENKIKSL 429



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 127/258 (49%), Gaps = 21/258 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQNR 57
           +  L +  N+LT + +     + +LT L++   S N L G+P ++ SL  L  L++ +N+
Sbjct: 370 LQTLSLSHNELTSIPD----QFGLLTGLVSCNLSSNKLQGLPASLSSLVSLQTLNVQENK 425

Query: 58  ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 116
           I S+P + S   SL    + NN +  L  E+ +L  L TL +  N+L+    E  QL +L
Sbjct: 426 IKSLPDNCSRLTSLRSLNLDNNVIELLSPEISQLKVLQTLRMRHNKLRTLPWEIAQLEQL 485

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 176
             LDL  N L  LP  +G +T++  LLL  N L +L +S+  G    L K         E
Sbjct: 486 RHLDLGENRLMQLPAVVGTLTSVVSLLLDKNSLESLPNSI--GDLTNLEKLCL------E 537

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
           D++         +++   S+T  +LSL  +    +P++I     + +    RN I  LP 
Sbjct: 538 DNQLQLLPPTFPSLS---SLTYLDLSLNKIKF--LPNQINRMKSLQEAYFQRNEISILPS 592

Query: 237 ELSSCASLQTLILSRNKI 254
            +S C  L TL L+ N++
Sbjct: 593 SISLCTGLHTLNLANNQV 610



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 119/259 (45%), Gaps = 52/259 (20%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP----------------- 235
           RLS     + L   +L   PS +     +  L+L  N + ++P                 
Sbjct: 38  RLSERLVSIKLSNNDLVEFPSSLRSLKLLHTLELDANQLVKIPPAIGEFQSMKSLFLHNN 97

Query: 236 ------PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL-DNNPLRQVP------ 282
                 PE+    +L+ L+L  N++ + P   L S ++L+ L L DNN L+ +P      
Sbjct: 98  CLVQIAPEIGQLGNLKVLLLQGNRLHEVPLE-LCSCTALTTLNLQDNNKLQSLPMKVGRL 156

Query: 283 --------SDG---------FKDIPMLQILDLS-YNIASLPENPPFSSLPHLQELYLRRM 324
                   +DG         F  I  L  L L+  NI+ +P +  F +   L  L L   
Sbjct: 157 TGLTRLFIADGNLLDSLPASFSYIETLTHLSLADNNISDIPSD--FGNFKALHHLDLAGN 214

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
           QL     +I  +  L  ++L++N + SIP  +  L++L+ELDLS N IS++P ELG L  
Sbjct: 215 QLEALAPEIGHVISLSRVNLARNKIVSIPFEWGLLSNLSELDLSGNPISSIPQELGQLT- 273

Query: 385 SLQALRLDGNPLRSIRRTI 403
           +L+ L +D NPL S+ R++
Sbjct: 274 ALECLHVDRNPLTSLPRSL 292


>gi|418708997|ref|ZP_13269797.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770927|gb|EKR46140.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 595

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 192/415 (46%), Gaps = 26/415 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ +
Sbjct: 165 LQKLWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLAT 223

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L + Y+ NN L+  P E+G+L  L  L    N+L     E  QL+ L  L
Sbjct: 224 LPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTL 283

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L NN L+  P EIG++  L+ L L  NPL       +    P     LR  + EN    
Sbjct: 284 NLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLRE-VAENGVYR 342

Query: 180 ASTTKEDLITMATRLSVTSKELS------------LEGMNL-----SAIPSEIWEAGEIT 222
                ++       LS+  K+ S            L G+NL     S +P EI     + 
Sbjct: 343 NLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLK 402

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
            L L  N ++ +P E+    +L+ L L  N+++  P  I   L +L  L L  N L+  P
Sbjct: 403 YLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEI-GQLRNLQKLSLHQNTLKIFP 461

Query: 283 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           ++  + +  LQ LDLS N   + P+      L +LQ L L+R QL     +I +LQ L+ 
Sbjct: 462 AE-IEQLKKLQKLDLSVNQFTTFPK--EIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQE 518

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           LDL+ N    +P+    L  L  LDL +N ++ LP E+G L+ +LQ L L  N L
Sbjct: 519 LDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ-NLQWLYLQNNQL 572



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 188/424 (44%), Gaps = 48/424 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G KLT L    I     L EL    NLL  +P+ IG L  L  LDL  N++ + P+
Sbjct: 53  LNLSGEKLTALPKE-IGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPA 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L    +  N L  LP E+G+L  L  L L+ N+L  +  E  QL+ L  L LS
Sbjct: 112 VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++  L+ L L  N    L   +        L+ L++          + 
Sbjct: 172 ENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEI------GQLQNLQT---------LNL 216

Query: 183 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
           +   L T+   +      ++L L    L+  P EI +   +  L    N +  LP E+  
Sbjct: 217 SDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQ 276

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-------------------LRQV 281
             +LQTL L  N++  +P  I   L +L  L+L  NP                   LR+V
Sbjct: 277 LQNLQTLNLVNNRLTVFPKEI-GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREV 335

Query: 282 PSDG-FKDIPM-----LQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDI 333
             +G ++++ +     L++ +LS       ++ P       +L+ L L        P +I
Sbjct: 336 AENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI 395

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
            RL+ L+ L L  N L++IP     L +L  L+L  N +  LP E+G L  +LQ L L  
Sbjct: 396 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLR-NLQKLSLHQ 454

Query: 394 NPLR 397
           N L+
Sbjct: 455 NTLK 458



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 196/433 (45%), Gaps = 48/433 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+L      +I     L  L  S+N L  +P  IG L  L  L L++N++ +
Sbjct: 96  LQELDLRDNQLATFPA-VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTT 154

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
            P  I    +L + ++  N L+ALP E+G+L  L TLDL  NQ      E  QL+ L  L
Sbjct: 155 FPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTL 214

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +LS+N L+ LP EIG++  L+KL L  N L      +        L+ L S  PEN  + 
Sbjct: 215 NLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQN---LQMLCS--PENRLTA 269

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL--------SRNSI 231
                  L  + T        L+L    L+  P EI +   +  L+L         R  I
Sbjct: 270 LPKEMGQLQNLQT--------LNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRI 321

Query: 232 QELPP-------ELSSCASLQTLILSRN----------KIKDWPDA---ILTSLSSLSCL 271
           Q+L P       E++     + L L++           + KD+  +   ++    +L  L
Sbjct: 322 QKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGL 381

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
            L +     +P +    +  L+ L L  N + ++P       L +L+ L L   +L   P
Sbjct: 382 NLYDCGFSTLPKE-ISRLKNLKYLALGLNGLKNIP--SEIGQLKNLEALNLEANELERLP 438

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +I +L+ L+ L L QN+L+  P   + L  L +LDLS N  +  P E+G LE +LQ L 
Sbjct: 439 KEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE-NLQTLN 497

Query: 391 LDGNPLRSIRRTI 403
           L  N L ++   I
Sbjct: 498 LQRNQLTNLTAEI 510



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 146/289 (50%), Gaps = 29/289 (10%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS   L+ LP EIG++  L++L L  N L TL         P  +  L     
Sbjct: 48  LNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTL---------PKEIGQL----- 93

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSR 228
             E+ +    +++   +AT  +V  +   LE ++LS      +P+EI     +  L L +
Sbjct: 94  --ENLQELDLRDN--QLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYK 149

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +   P E+    +LQ L LS N++   P  I   L +L  L L +N    +P +    
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQDNQFTILPKE-IGQ 207

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  LQ L+LS N +A+LP       L +LQ+LYLR  +L   P +I +LQ L++L   +N
Sbjct: 208 LQNLQTLNLSDNQLATLP--VEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPEN 265

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L ++P+    L +L  L+L +N ++  P E+G L+ +LQ L L  NPL
Sbjct: 266 RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQ-NLQDLELLMNPL 313



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 118/228 (51%), Gaps = 7/228 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
           D +   T  DL T A +  +  + L+L G  L+A+P EI +   + +L+L  N +  LP 
Sbjct: 30  DEDEPGTYMDL-TKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPK 88

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    +LQ L L  N++  +P A++  L  L  L L  N L  +P++    +  LQ L 
Sbjct: 89  EIGQLENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IGRLQNLQDLG 146

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N + + P+      L +LQ+L+L   +L   P +I +L+ L+ LDL  N    +P+ 
Sbjct: 147 LYKNKLTTFPK--EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKE 204

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L +L  L+LSDN ++ LP E+G L+ +LQ L L  N L    + I
Sbjct: 205 IGQLQNLQTLNLSDNQLATLPVEIGQLQ-NLQKLYLRNNRLTVFPKEI 251



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 96/234 (41%), Gaps = 37/234 (15%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ I  L  L  L L  N + +IPS I    +L    +  N L  LP E+G+L  L  L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKL 450

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            LH N LK +  E  QL+ L  LDLS N  +  P EIGK+  L+ L L  N L  L + +
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEI 510

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
             G    L                                  +EL L     + +P EI 
Sbjct: 511 --GQLQNL----------------------------------QELDLNDNQFTVLPKEIG 534

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +  ++  LDL  N +  LP E+    +LQ L L  N++       +  L  L C
Sbjct: 535 KLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRKLLPLKC 588



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 7/144 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N L +     I     L +L  S N     P+ IG L  L  L+L +N++ +
Sbjct: 447 LQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTN 505

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           + + I    +L E  + +N  + LP E+GKL KL TLDL +NQL     E  QL+ L  L
Sbjct: 506 LTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 565

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL 143
            L NN LS     + +   +RKLL
Sbjct: 566 YLQNNQLS-----LKEQERIRKLL 584


>gi|158333285|ref|YP_001514457.1| hypothetical protein AM1_0055 [Acaryochloris marina MBIC11017]
 gi|158303526|gb|ABW25143.1| leucine-rich repeat-containing protein [Acaryochloris marina
           MBIC11017]
          Length = 407

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 200/408 (49%), Gaps = 29/408 (7%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +A    +TEL  S   L+ +PE+IGSLS+L  L L +N ++ +P S+     L    +  
Sbjct: 16  VARLEGVTELDLSDIGLSELPESIGSLSQLKSLYLSENELMRLPKSLGQLTQLQTLDLAR 75

Query: 79  NALSALPAELGKLSKLGTLDLHSN---QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK 135
           N L  L   LG L++L +LDL  N   +L E+     QLR   L+L +N L  +PP IGK
Sbjct: 76  NHLPILTEVLGDLTQLRSLDLMGNALVELPEFIGAFSQLR--SLNLVSNQLVHIPPSIGK 133

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           +  L++L L+ NP+      L        L  LRS        E ++T  + I    +  
Sbjct: 134 LKNLQELQLSYNPIARWPKEL------GWLTGLRSL-------EIASTGLNEIPPDWKSL 180

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              + L+L   +L  +P  +    E+  LDLS N ++ELP  L S   L +L +  N+++
Sbjct: 181 QGLESLNLSFNHLQTLPEWLGTWTELRSLDLSFNQLKELPATLGSFIQLTSLDIQSNQLQ 240

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             P  I   L +L+ L   NN L  +P +    +  L  L ++ N I  LPE+     L 
Sbjct: 241 SLPPQI-CDLVNLTSLLAYNNQLTHLP-EALGGLAALTTLGMAGNSICQLPES--IGELQ 296

Query: 315 HLQELYL-----RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
           +L++L       + + L+  P  +   + L  L      L+S+P     LT L  L++S 
Sbjct: 297 NLKQLIFNLDPDQPVPLQVFPAGLRGCRLLEQLTFVACELRSLPHWIGELTQLKSLNVSH 356

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           NN++ LPP LG L+ +L+ L L  NPLRS    + +RG  A+  YL++
Sbjct: 357 NNLTDLPPSLGTLD-NLKTLNLSNNPLRSELEVLWERGPNAIKSYLQN 403



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 112/255 (43%), Gaps = 54/255 (21%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++  N L  L    + +WT L  L  S N L  +P T+GS  +L  LD+  N++ S
Sbjct: 183 LESLNLSFNHLQTLPE-WLGTWTELRSLDLSFNQLKELPATLGSFIQLTSLDIQSNQLQS 241

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P  I    +L      NN L+ LP  LG L+ L TL +  N +       CQ       
Sbjct: 242 LPPQICDLVNLTSLLAYNNQLTHLPEALGGLAALTTLGMAGNSI-------CQ------- 287

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
                   LP  IG++  L++L+   +P + +   +     PA L+  R           
Sbjct: 288 --------LPESIGELQNLKQLIFNLDPDQPVPLQVF----PAGLRGCR----------- 324

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                    +  +L+  + EL        ++P  I E  ++  L++S N++ +LPP L +
Sbjct: 325 ---------LLEQLTFVACEL-------RSLPHWIGELTQLKSLNVSHNNLTDLPPSLGT 368

Query: 241 CASLQTLILSRNKIK 255
             +L+TL LS N ++
Sbjct: 369 LDNLKTLNLSNNPLR 383


>gi|418680694|ref|ZP_13241938.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327638|gb|EJO79883.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
          Length = 351

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 118/350 (33%), Positives = 169/350 (48%), Gaps = 43/350 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 25  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 84

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 85  IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 138

Query: 170 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 139 SLNLSYNQIKTIPKKIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 190

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  +     K+
Sbjct: 191 NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTLS----KE 245

Query: 289 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
           I  LQ                     +L+ L LR  QL   P +I +L+ L++LDL  N 
Sbjct: 246 IEQLQ---------------------NLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQ 284

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L ++PEG   L +L  LDL  N ++ LP E+G L+ +LQ L L+ N L S
Sbjct: 285 LTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQ-NLQELFLNNNQLSS 333



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 159/327 (48%), Gaps = 24/327 (7%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+   L    I     L EL  +KN L  +P+ IG L  L +L+L  N+I +IP 
Sbjct: 25  LDLSANRFKTLPKE-IGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 83

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L   Y+ NN L+ LP E+G+L KL  L L  NQL     E  QL+ L  L+LS
Sbjct: 84  EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 143

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N +  +P +I K+  L+ L L  N L TL   +        L+ L+S        + ST
Sbjct: 144 YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEI------GQLQNLQSL-------DLST 190

Query: 183 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
            +  L T+   +      ++L L    L+ +P+EI +   +  L+L  N +  L  E+  
Sbjct: 191 NR--LTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQ 248

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             +L++L L  N++  +P  I   L +L  L L +N L  +P +G   +  LQ LDL  N
Sbjct: 249 LQNLKSLDLRSNQLTTFPKEI-GQLKNLQVLDLGSNQLTTLP-EGIGQLKNLQTLDLDSN 306

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQL 326
            + +LP+      L +LQEL+L   QL
Sbjct: 307 QLTTLPQ--EIGQLQNLQELFLNNNQL 331



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 143/288 (49%), Gaps = 21/288 (7%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RL 172
           L++  LDLS N    LP EIGK+  L++L L  N L  L   +        LK LR   L
Sbjct: 20  LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEI------GQLKNLRKLNL 73

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
             N+        E L  + +        L L    L+ +P EI +  ++  L L +N + 
Sbjct: 74  SANQIKTIPKEIEKLQKLQS--------LYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT 125

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            LP E+    +L++L LS N+IK  P  I   L  L  L LDNN L  +P +    +  L
Sbjct: 126 TLPQEIGQLKNLKSLNLSYNQIKTIPKKI-EKLQKLQSLGLDNNQLTTLPQE-IGQLQNL 183

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           Q LDLS N + +LP+      L +LQ+LYL   QL   P +I +L+ L+ L+L  N L +
Sbjct: 184 QSLDLSTNRLTTLPQ--EIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTT 241

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           + +  + L +L  LDL  N ++  P E+G L+ +LQ L L  N L ++
Sbjct: 242 LSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLK-NLQVLDLGSNQLTTL 288



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 113/221 (51%), Gaps = 7/221 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E   T +DL T A +  +  + L L       +P EI +   + +L+L++N +  LP 
Sbjct: 2   QAEEPGTYQDL-TKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPK 60

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    +L+ L LS N+IK  P  I   L  L  L L NN L  +P +    +  LQ L 
Sbjct: 61  EIGQLKNLRKLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWLY 118

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N + +LP+      L +L+ L L   Q++  P  I +LQ+L+ L L  N L ++P+ 
Sbjct: 119 LPKNQLTTLPQ--EIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQE 176

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
              L +L  LDLS N ++ LP E+G L+ +LQ L L  N L
Sbjct: 177 IGQLQNLQSLDLSTNRLTTLPQEIGHLQ-NLQDLYLVSNQL 216



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ +
Sbjct: 252 LKSLDLRSNQLTTFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTT 310

Query: 61  IPSSISGCCSLAEFYMGNNALSA 83
           +P  I    +L E ++ NN LS+
Sbjct: 311 LPQEIGQLQNLQELFLNNNQLSS 333


>gi|418668175|ref|ZP_13229578.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756032|gb|EKR17659.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 402

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 168/355 (47%), Gaps = 43/355 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L+L   ++ ++P  I    +L    + NN    LP E+G+L  L  L+L +NQL     E
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLTTLPKE 112

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L  L L  N L+ L  EIG++  L+ L L  N L TL   +             
Sbjct: 113 IEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEI------------- 159

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                          E L  + T        L L    +  IP+ IW+   + KL L  N
Sbjct: 160 ---------------EQLKNLQT--------LGLGNNQIKIIPNGIWQLQNLQKLYLDYN 196

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            I+ +P E+    +LQ L L  N++K  P  I   L +L  L L +N L  +P++  + +
Sbjct: 197 QIKTIPKEIGQLQNLQELNLWNNQLKTLPKEI-EQLKNLQTLHLGSNQLTTLPNE-IEQL 254

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ LDL YN + +LP+      L +LQEL L   QL   P +I +LQ L+ LDL  N 
Sbjct: 255 KNLQTLDLYYNQLTTLPQ--EIGQLQNLQELSLYYNQLTALPKEIGQLQNLKSLDLRNNQ 312

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L ++P     L +L  LDL +N ++ LP E+G L+ +L++L L  N L  + + I
Sbjct: 313 LTTLPIEIGQLQNLKSLDLRNNQLTTLPIEIGQLQ-NLKSLDLRNNQLTILPKEI 366



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 176/364 (48%), Gaps = 43/364 (11%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P+ I  L  L  LDL  N+  ++P  I    +L E  + NN L+ LP E+ +L  L
Sbjct: 60  LTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLTTLPKEIEQLKNL 119

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
            TL L  NQL     E  QL+ L VL L+NN L+ LP EI ++  L+ L L  N ++ + 
Sbjct: 120 QTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGLGNNQIKII- 178

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
                   P  +  L++                            ++L L+   +  IP 
Sbjct: 179 --------PNGIWQLQNL---------------------------QKLYLDYNQIKTIPK 203

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           EI +   + +L+L  N ++ LP E+    +LQTL L  N++   P+ I   L +L  L L
Sbjct: 204 EIGQLQNLQELNLWNNQLKTLPKEIEQLKNLQTLHLGSNQLTTLPNEI-EQLKNLQTLDL 262

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
             N L  +P +    +  LQ L L YN + +LP+      L +L+ L LR  QL   P +
Sbjct: 263 YYNQLTTLPQE-IGQLQNLQELSLYYNQLTALPK--EIGQLQNLKSLDLRNNQLTTLPIE 319

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
           I +LQ L+ LDL  N L ++P     L +L  LDL +N ++ LP E+G L+ +LQ L L+
Sbjct: 320 IGQLQNLKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQLTILPKEIGQLK-NLQELYLN 378

Query: 393 GNPL 396
            N L
Sbjct: 379 NNQL 382



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 146/306 (47%), Gaps = 43/306 (14%)

Query: 96  TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 154
            L+L S +L     E  QL+ L  LDL+NN    LP EIG++  L++L L  N L TL  
Sbjct: 52  VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLTTLPK 111

Query: 155 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 214
            +                            E L  + T        L L    L+ +  E
Sbjct: 112 EI----------------------------EQLKNLQT--------LGLGYNQLTTLSQE 135

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           I +   +  L L+ N +  LP E+    +LQTL L  N+IK  P+ I   L +L  L LD
Sbjct: 136 IGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGLGNNQIKIIPNGIW-QLQNLQKLYLD 194

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
            N ++ +P +    +  LQ L+L  N + +LP+      L +LQ L+L   QL   P +I
Sbjct: 195 YNQIKTIPKE-IGQLQNLQELNLWNNQLKTLPK--EIEQLKNLQTLHLGSNQLTTLPNEI 251

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
            +L+ L+ LDL  N L ++P+    L +L EL L  N ++ALP E+G L+ +L++L L  
Sbjct: 252 EQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSLYYNQLTALPKEIGQLQ-NLKSLDLRN 310

Query: 394 NPLRSI 399
           N L ++
Sbjct: 311 NQLTTL 316



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 135/299 (45%), Gaps = 40/299 (13%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N+LT LS   I     L  L  + N L  +P+ I  L  L  L L  N+I  IP+ I   
Sbjct: 127 NQLTTLSQE-IGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGLGNNQIKIIPNGIWQL 185

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 127
            +L + Y+  N +  +P E+G+L  L  L+L +NQLK    E  QL+ L  L L +N L+
Sbjct: 186 QNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTLPKEIEQLKNLQTLHLGSNQLT 245

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            LP EI ++  L+ L L  N L TL         P  +  L++                 
Sbjct: 246 TLPNEIEQLKNLQTLDLYYNQLTTL---------PQEIGQLQNL---------------- 280

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
                      +ELSL    L+A+P EI +   +  LDL  N +  LP E+    +L++L
Sbjct: 281 -----------QELSLYYNQLTALPKEIGQLQNLKSLDLRNNQLTTLPIEIGQLQNLKSL 329

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 306
            L  N++   P  I   L +L  L L NN L  +P +    +  LQ L L+ N  S+ E
Sbjct: 330 DLRNNQLTTLPIEI-GQLQNLKSLDLRNNQLTILPKE-IGQLKNLQELYLNNNQLSIEE 386



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 117/257 (45%), Gaps = 42/257 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 58
           +  L +  N++ ++ N +   W +  L +L    N +  +P+ IG L  L  L+L  N++
Sbjct: 165 LQTLGLGNNQIKIIPNGI---WQLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQL 221

Query: 59  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 117
            ++P  I    +L   ++G+N L+ LP E+ +L  L TLDL+ NQL     E  QL+ L 
Sbjct: 222 KTLPKEIEQLKNLQTLHLGSNQLTTLPNEIEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQ 281

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            L L  N L+ LP EIG++  L+ L L  N L TL         P  +  L++       
Sbjct: 282 ELSLYYNQLTALPKEIGQLQNLKSLDLRNNQLTTL---------PIEIGQLQNL------ 326

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                                K L L    L+ +P EI +   +  LDL  N +  LP E
Sbjct: 327 ---------------------KSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQLTILPKE 365

Query: 238 LSSCASLQTLILSRNKI 254
           +    +LQ L L+ N++
Sbjct: 366 IGQLKNLQELYLNNNQL 382



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 119/261 (45%), Gaps = 48/261 (18%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L+L    L+ +P EI +   +  LDL+ N  + LP E+    +LQ L
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQEL 99

Query: 248 ILSRNKIKDWPDAI---------------LTSLS-------SLSCLKLDNNPLRQVPSD- 284
            L  N++   P  I               LT+LS       +L  L L+NN L  +P + 
Sbjct: 100 NLWNNQLTTLPKEIEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEI 159

Query: 285 ---------------------GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
                                G   +  LQ L L YN I ++P+      L +LQEL L 
Sbjct: 160 EQLKNLQTLGLGNNQIKIIPNGIWQLQNLQKLYLDYNQIKTIPK--EIGQLQNLQELNLW 217

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
             QL+  P +I +L+ L+ L L  N L ++P   + L +L  LDL  N ++ LP E+G L
Sbjct: 218 NNQLKTLPKEIEQLKNLQTLHLGSNQLTTLPNEIEQLKNLQTLDLYYNQLTTLPQEIGQL 277

Query: 383 EPSLQALRLDGNPLRSIRRTI 403
           + +LQ L L  N L ++ + I
Sbjct: 278 Q-NLQELSLYYNQLTALPKEI 297



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 74/144 (51%), Gaps = 7/144 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT L    I     L EL    N L  +P+ IG L  L  LDL  N++ +
Sbjct: 257 LQTLDLYYNQLTTLPQE-IGQLQNLQELSLYYNQLTALPKEIGQLQNLKSLDLRNNQLTT 315

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    + NN L+ LP E+G+L  L +LDL +NQL     E  QL+ L  L
Sbjct: 316 LPIEIGQLQNLKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQLTILPKEIGQLKNLQEL 375

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL 143
            L+NN LS     I +   +RKLL
Sbjct: 376 YLNNNQLS-----IEEKERIRKLL 394


>gi|328779859|ref|XP_003249714.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Apis
           mellifera]
          Length = 565

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 128/406 (31%), Positives = 180/406 (44%), Gaps = 50/406 (12%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
           RLDL ++ I  +PS++     L EFY+  N L  LP E+G L  L TL L  N L     
Sbjct: 88  RLDLSKSNITHLPSTVRDLTHLIEFYLYGNKLVTLPPEIGCLGNLETLALSENSLTSLPN 147

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
               L+ L VLDL +N LS +P  + K+T L  L L  N +R +  ++ N     +L   
Sbjct: 148 TLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTMLS-- 205

Query: 169 RSRLPENEDSEASTTKEDLITMATRLSVTSKEL----------------SLEGMNLSAIP 212
              L EN+  E       LI + T   V+   L                 L+   L  IP
Sbjct: 206 ---LRENKIRELPAGIGKLINLIT-FDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIP 261

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
             I     +T+L L  N +  +P  L++C  +    +  N++   PD +L SLS L+ + 
Sbjct: 262 DTIGNLISLTRLGLRYNRLTNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTIT 321

Query: 273 LDNNPLRQVPSDG---FKDIPML-----QILDLSYNIASLPEN--------PPFSSLP-- 314
           L  N     PS G   F ++  +     +I  + Y I S  +N           ++LP  
Sbjct: 322 LSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQLTALPLD 381

Query: 315 -----HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
                ++ EL L   QL + P DI  LQ L +L LS N L+ IP    NL  L  LDL +
Sbjct: 382 IGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEE 441

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           N I +LP E+G L   LQ L L  N + S+ R I   G    L YL
Sbjct: 442 NKIESLPNEIGFLR-DLQKLILQSNQVTSLPRAI---GHLTNLTYL 483



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 201/428 (46%), Gaps = 22/428 (5%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N LT L N L  +   L  L    N L+ +P+ +  L+ L  L L  NR+  +  +I   
Sbjct: 140 NSLTSLPNTL-ENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSDNIRNL 198

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLS 127
            +L    +  N +  LPA +GKL  L T D+  N L+    E    ++LS LDL +N L 
Sbjct: 199 TNLTMLSLRENKIRELPAGIGKLINLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELL 258

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            +P  IG + +L +L L  N L  +  SL N           +++ +  D   ++  +  
Sbjct: 259 DIPDTIGNLISLTRLGLRYNRLTNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLT 318

Query: 188 ITMATRLSVTS------------KELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQEL 234
               +R + T+              ++LE   +  IP  I+  A  + KL++  N +  L
Sbjct: 319 TITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQLTAL 378

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P ++ +  ++  L L  N++   PD I   L +L  L L NN L+++P+    ++  L++
Sbjct: 379 PLDIGTWINMVELNLGTNQLTKIPDDI-QCLQNLEVLILSNNLLKRIPA-SIANLRKLRV 436

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           LDL  N I SLP    F  L  LQ+L L+  Q+   P  I  L  L  L + +N+L  +P
Sbjct: 437 LDLEENKIESLPNEIGF--LRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYLP 494

Query: 354 EGFKNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVL 412
           E    L +L  L ++DN N+  LP EL L   +L  + ++  PL  I   I+  G   V+
Sbjct: 495 EEIGTLENLDSLYVNDNANLHNLPFELALC-TNLSIMSIENCPLSQIPPEIVAGGPSLVI 553

Query: 413 KYLKDKIP 420
           ++LK + P
Sbjct: 554 QFLKMQGP 561



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 13/217 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E NK+  +   + +    L +L   +N L  +P  IG+   ++ L+L  N++  IP 
Sbjct: 344 INLEHNKIDKIPYGIFSRAKNLAKLNMKENQLTALPLDIGTWINMVELNLGTNQLTKIPD 403

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    + NN L  +PA +  L KL  LDL  N+++    E   LR L  L L 
Sbjct: 404 DIQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEENKIESLPNEIGFLRDLQKLILQ 463

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N ++ LP  IG +T L  L +  N L  L   +        L+ L S L  N+++    
Sbjct: 464 SNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEI------GTLENLDS-LYVNDNANLHN 516

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 219
              +L  + T LS+    +S+E   LS IP EI   G
Sbjct: 517 LPFEL-ALCTNLSI----MSIENCPLSQIPPEIVAGG 548



 Score = 41.6 bits (96), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           R + L  LDLS++++  +P   ++LT L E  L  N +  LPPE+G L  +L+ L L  N
Sbjct: 82  REECLERLDLSKSNITHLPSTVRDLTHLIEFYLYGNKLVTLPPEIGCL-GNLETLALSEN 140

Query: 395 PLRSIRRTILDRGTKAVLKYLKDKIPE 421
            L S+  T+ +  +  VL    +K+ E
Sbjct: 141 SLTSLPNTLENLKSLRVLDLRHNKLSE 167


>gi|393905431|gb|EJD73969.1| leucine-rich repeat protein SHOC-2 [Loa loa]
          Length = 498

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 189/410 (46%), Gaps = 63/410 (15%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     LTEL   KN L  +P  IG+L  L +L L +N + S+P +++    L    + +
Sbjct: 34  IRDLVQLTELFLYKNKLAVLPNEIGNLVNLKKLGLSENGLTSLPDTLAALTRLETLDLRH 93

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP  + ++S L TL L  N++     E  +L RL ++DL  N +  LPP IG++ 
Sbjct: 94  NKLCELPPVIYQISSLETLWLRYNRIVSIGSEIGRLKRLKMIDLRENKIRELPPTIGQIK 153

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +L   LL+ N LRT                    +PE             I   + L+  
Sbjct: 154 SLIVCLLSYNHLRT--------------------IPEE------------IGQCSELT-- 179

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             +L L+  +L ++P  +     + +L +  N ++ LP  ++ C  L+  I+  N+++  
Sbjct: 180 --QLDLQHNDLVSLPEAMGNLQNLIRLGIRYNKLRHLPSGMAFCHKLEEFIVESNQLEAL 237

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP----------- 305
           P+ +L SL +L  + L  N L   PS G +       +++ +N IA +P           
Sbjct: 238 PEGMLASLPNLKTINLSRNELTVFPSGGPQQFASCVSINMEHNAIAKIPFGIFSKATGLT 297

Query: 306 -----ENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
                EN   +S+P        + EL L   QLR  P D+ +L  L +L LS N L+ +P
Sbjct: 298 KLNLKEN-ALTSMPLDMGCWLAMTELNLSTNQLRVLPDDVDKLVNLEVLVLSNNMLKKLP 356

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               +L  L ELDL +N + A+P E+G +  SL  L +  N L  + RTI
Sbjct: 357 SQIGSLKKLRELDLEENELDAIPNEIGFVT-SLTKLWIQSNKLVGLPRTI 405



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 128/310 (41%), Gaps = 73/310 (23%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   + LT+L    N L  +PE +G+L  LIRL +  N++  +PS ++ C  L EF + +
Sbjct: 172 IGQCSELTQLDLQHNDLVSLPEAMGNLQNLIRLGIRYNKLRHLPSGMAFCHKLEEFIVES 231

Query: 79  NALSALP-AELGKLSKLGTLDLHSNQLKEY----------CVE----------------- 110
           N L ALP   L  L  L T++L  N+L  +          CV                  
Sbjct: 232 NQLEALPEGMLASLPNLKTINLSRNELTVFPSGGPQQFASCVSINMEHNAIAKIPFGIFS 291

Query: 111 ----------------------ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
                                  C L ++ L+LS N L  LP ++ K+  L  L+L+ N 
Sbjct: 292 KATGLTKLNLKENALTSMPLDMGCWLAMTELNLSTNQLRVLPDDVDKLVNLEVLVLSNNM 351

Query: 149 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS------ 202
           L+ L S +        LK LR    E  + +A   +   +T  T+L + S +L       
Sbjct: 352 LKKLPSQI------GSLKKLRELDLEENELDAIPNEIGFVTSLTKLWIQSNKLVGLPRTI 405

Query: 203 ---------LEGMN-LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQTLILSR 251
                      G N L+++P EI     +  L ++ N S+  LP EL+ CASL+ + +  
Sbjct: 406 GNLTNLTDLRAGENCLTSLPEEIGNLDSLRSLYINDNPSLHNLPFELALCASLEIMSIEN 465

Query: 252 NKIKDWPDAI 261
             +   P  I
Sbjct: 466 CPLSQIPPEI 475



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 5/162 (3%)

Query: 220 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
           E T+LDLS + I  +P  +     L  L L +NK+   P+ I  +L +L  L L  N L 
Sbjct: 16  EETRLDLSSSDIVSIPSSIRDLVQLTELFLYKNKLAVLPNEI-GNLVNLKKLGLSENGLT 74

Query: 280 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
            +P D    +  L+ LDL +N +  LP  P    +  L+ L+LR  ++    ++I RL++
Sbjct: 75  SLP-DTLAALTRLETLDLRHNKLCELP--PVIYQISSLETLWLRYNRIVSIGSEIGRLKR 131

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L+++DL +N ++ +P     + SL    LS N++  +P E+G
Sbjct: 132 LKMIDLRENKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEIG 173



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 89/175 (50%), Gaps = 3/175 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M++L++  N+L VL ++ +     L  L+ S N+L  +P  IGSL +L  LDL +N + +
Sbjct: 319 MTELNLSTNQLRVLPDD-VDKLVNLEVLVLSNNMLKKLPSQIGSLKKLRELDLEENELDA 377

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP+ I    SL + ++ +N L  LP  +G L+ L  L    N L     E   L  L  L
Sbjct: 378 IPNEIGFVTSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENCLTSLPEEIGNLDSLRSL 437

Query: 120 DLSNN-SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            +++N SL  LP E+    +L  + +   PL  +   +  G    +++YL+ + P
Sbjct: 438 YINDNPSLHNLPFELALCASLEIMSIENCPLSQIPPEITAGGPSLVIQYLKMQGP 492


>gi|428310898|ref|YP_007121875.1| hypothetical protein Mic7113_2682 [Microcoleus sp. PCC 7113]
 gi|428252510|gb|AFZ18469.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
          Length = 1126

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 135/388 (34%), Positives = 201/388 (51%), Gaps = 22/388 (5%)

Query: 35   LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
            L  +P+ IG+L+ L  L L++N++ ++P  I    +L    + NN L+ LP E+G LS L
Sbjct: 756  LTELPKEIGNLTDLTWLYLNRNQLATLPPEIGNLINLRVLSLENNRLTKLPKEIGNLSHL 815

Query: 95   GTLDLHSN-QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
              L L  N QLK    +   L  L+ L+LS+N L  LP EIG +T L +L L+ N L+ L
Sbjct: 816  RGLYLSGNYQLKVLPKKISNLTNLTQLNLSSNQLKVLPKEIGNLTNLTQLNLSSNQLKVL 875

Query: 153  RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
               + N     LL    ++L E             I   T L V    L L    L+A+P
Sbjct: 876  PKEIGNLTNLTLLDLNGNQLTELPPE---------IGNLTNLEV----LYLSRNQLTALP 922

Query: 213  SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
             EI     +T+LDLS N    LP E+ +  +L+ L L+R ++      I  +L++L  L 
Sbjct: 923  KEIGNLTNLTELDLSENE-NVLPAEIGNLTNLRRLYLNRKQLTVLVPEI-GNLTNLKTLS 980

Query: 273  LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 331
            L +N L  +P +  K +  L+ LD++ N +  LP  P   +L +L ELYL   QL   P 
Sbjct: 981  LKDNQLIALPPEIGK-LTQLKWLDINKNQLRQLP--PEIGNLTNLTELYLYDNQLTALPK 1037

Query: 332  DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
            +I  L  L  L L +N L ++P     LT+L EL L  N ++ALPPE+G L  +L  L  
Sbjct: 1038 EIGNLTNLTKLHLYKNKLMALPPEMGRLTNLIELYLDYNQLTALPPEIGNL-TNLTQLSF 1096

Query: 392  DGNPLRSIRRTILDRGTKAVLKYLKDKI 419
              N L S    I+ +GT+A+L YL++++
Sbjct: 1097 YNNQLISPSPEIVKQGTQAILAYLREQL 1124



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 174/383 (45%), Gaps = 83/383 (21%)

Query: 39   PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 98
            P+ I  L+    L+L   ++  +P  I     L   Y+  N L+ LP E+G L       
Sbjct: 737  PKEIFQLTNQTSLNLAGKQLTELPKEIGNLTDLTWLYLNRNQLATLPPEIGNL------- 789

Query: 99   LHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN-PLRTLRSSLV 157
                           + L VL L NN L+ LP EIG ++ LR L L+GN  L+ L   + 
Sbjct: 790  ---------------INLRVLSLENNRLTKLPKEIGNLSHLRGLYLSGNYQLKVLPKKIS 834

Query: 158  NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 217
            N                             +T  T+L+++S +L +       +P EI  
Sbjct: 835  N-----------------------------LTNLTQLNLSSNQLKV-------LPKEIGN 858

Query: 218  AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
               +T+L+LS N ++ LP E+ +  +L  L L+ N++ + P  I  +L++L  L L  N 
Sbjct: 859  LTNLTQLNLSSNQLKVLPKEIGNLTNLTLLDLNGNQLTELPPEI-GNLTNLEVLYLSRNQ 917

Query: 278  LRQVPSDGFKDIPMLQILDLSYNIASLPEN---------------------PPFSSLPHL 316
            L  +P +   ++  L  LDLS N   LP                       P   +L +L
Sbjct: 918  LTALPKE-IGNLTNLTELDLSENENVLPAEIGNLTNLRRLYLNRKQLTVLVPEIGNLTNL 976

Query: 317  QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
            + L L+  QL   P +I +L QL+ LD+++N L+ +P    NLT+LTEL L DN ++ALP
Sbjct: 977  KTLSLKDNQLIALPPEIGKLTQLKWLDINKNQLRQLPPEIGNLTNLTELYLYDNQLTALP 1036

Query: 377  PELGLLEPSLQALRLDGNPLRSI 399
             E+G L  +L  L L  N L ++
Sbjct: 1037 KEIGNL-TNLTKLHLYKNKLMAL 1058



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 136/301 (45%), Gaps = 61/301 (20%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
            +++L++  N+L VL    I + T LT+L  S N L  +P+ IG+L+ L  LDL+ N++  
Sbjct: 839  LTQLNLSSNQLKVLPKE-IGNLTNLTQLNLSSNQLKVLPKEIGNLTNLTLLDLNGNQLTE 897

Query: 61   IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ------------LKEYC 108
            +P  I    +L   Y+  N L+ALP E+G L+ L  LDL  N+            L+   
Sbjct: 898  LPPEIGNLTNLEVLYLSRNQLTALPKEIGNLTNLTELDLSENENVLPAEIGNLTNLRRLY 957

Query: 109  VEACQL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            +   QL            L  L L +N L  LPPEIGK+T L+ L +  N LR L   + 
Sbjct: 958  LNRKQLTVLVPEIGNLTNLKTLSLKDNQLIALPPEIGKLTQLKWLDINKNQLRQLPPEIG 1017

Query: 158  NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 217
            N                                 T L+    EL L    L+A+P EI  
Sbjct: 1018 N--------------------------------LTNLT----ELYLYDNQLTALPKEIGN 1041

Query: 218  AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
               +TKL L +N +  LPPE+    +L  L L  N++   P  I  +L++L+ L   NN 
Sbjct: 1042 LTNLTKLHLYKNKLMALPPEMGRLTNLIELYLDYNQLTALPPEI-GNLTNLTQLSFYNNQ 1100

Query: 278  L 278
            L
Sbjct: 1101 L 1101



 Score = 42.0 bits (97), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
           AP +I +L     L+L+   L  +P+   NLT LT L L+ N ++ LPPE+G L  +L+ 
Sbjct: 736 APKEIFQLTNQTSLNLAGKQLTELPKEIGNLTDLTWLYLNRNQLATLPPEIGNL-INLRV 794

Query: 389 LRLDGNPLRSIRRTI 403
           L L+ N L  + + I
Sbjct: 795 LSLENNRLTKLPKEI 809


>gi|417770611|ref|ZP_12418517.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|409947383|gb|EKN97381.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665930|gb|EMF31412.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 377

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 118/350 (33%), Positives = 169/350 (48%), Gaps = 43/350 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 51  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 110

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 111 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 164

Query: 170 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 165 SLNLSYNQIKTIPKKIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 216

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  +     K+
Sbjct: 217 NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTLS----KE 271

Query: 289 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
           I  LQ                     +L+ L LR  QL   P +I +L+ L++LDL  N 
Sbjct: 272 IEQLQ---------------------NLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQ 310

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L ++PEG   L +L  LDL  N ++ LP E+G L+ +LQ L L+ N L S
Sbjct: 311 LTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQ-NLQELFLNNNQLSS 359



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 157/327 (48%), Gaps = 24/327 (7%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+   L    I     L EL  +KN L  +P+ IG L  L +L+L  N+I +IP 
Sbjct: 51  LDLSANRFKTLPKE-IGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 109

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L   Y+ NN L+ LP E+G+L KL  L L  NQL     E  QL+ L  L+LS
Sbjct: 110 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 169

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N +  +P +I K+  L+ L L  N L TL   +              +L   +  + ST
Sbjct: 170 YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEI-------------GQLQNLQSLDLST 216

Query: 183 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
            +  L T+   +      ++L L    L+ +P+EI +   +  L+L  N +  L  E+  
Sbjct: 217 NR--LTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQ 274

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             +L++L L  N++  +P  I   L +L  L L +N L  +P +G   +  LQ LDL  N
Sbjct: 275 LQNLKSLDLRSNQLTTFPKEI-GQLKNLQVLDLGSNQLTTLP-EGIGQLKNLQTLDLDSN 332

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQL 326
            + +LP+      L +LQEL+L   QL
Sbjct: 333 QLTTLPQ--EIGQLQNLQELFLNNNQL 357



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 143/288 (49%), Gaps = 21/288 (7%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RL 172
           L++  LDLS N    LP EIGK+  L++L L  N L  L   +        LK LR   L
Sbjct: 46  LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEI------GQLKNLRKLNL 99

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
             N+        E L  + +        L L    L+ +P EI +  ++  L L +N + 
Sbjct: 100 SANQIKTIPKEIEKLQKLQS--------LYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT 151

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            LP E+    +L++L LS N+IK  P  I   L  L  L LDNN L  +P +    +  L
Sbjct: 152 TLPQEIGQLKNLKSLNLSYNQIKTIPKKI-EKLQKLQSLGLDNNQLTTLPQE-IGQLQNL 209

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           Q LDLS N + +LP+      L +LQ+LYL   QL   P +I +L+ L+ L+L  N L +
Sbjct: 210 QSLDLSTNRLTTLPQ--EIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTT 267

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           + +  + L +L  LDL  N ++  P E+G L+ +LQ L L  N L ++
Sbjct: 268 LSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLK-NLQVLDLGSNQLTTL 314



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 113/221 (51%), Gaps = 7/221 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E   T +DL T A +  +  + L L       +P EI +   + +L+L++N +  LP 
Sbjct: 28  QAEEPGTYQDL-TKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPK 86

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    +L+ L LS N+IK  P  I   L  L  L L NN L  +P +    +  LQ L 
Sbjct: 87  EIGQLKNLRKLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWLY 144

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N + +LP+      L +L+ L L   Q++  P  I +LQ+L+ L L  N L ++P+ 
Sbjct: 145 LPKNQLTTLPQ--EIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQE 202

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
              L +L  LDLS N ++ LP E+G L+ +LQ L L  N L
Sbjct: 203 IGQLQNLQSLDLSTNRLTTLPQEIGHLQ-NLQDLYLVSNQL 242



 Score = 44.7 bits (104), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ +
Sbjct: 278 LKSLDLRSNQLTTFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTT 336

Query: 61  IPSSISGCCSLAEFYMGNNALSA 83
           +P  I    +L E ++ NN LS+
Sbjct: 337 LPQEIGQLQNLQELFLNNNQLSS 359


>gi|254410000|ref|ZP_05023780.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196183036|gb|EDX78020.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1115

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 135/431 (31%), Positives = 211/431 (48%), Gaps = 41/431 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M++L++ GN+LT +  + I+    LTEL  S N L  +PE+I  L  L +LDL  N++  
Sbjct: 1   MTQLNLSGNQLTQVPES-ISQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQ 59

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P SI+   +L +  +  N L+ +P  + +L  L  L+L  NQL +      QL  L+ L
Sbjct: 60  VPESITQLVNLTKLNLSVNQLTQVPESISQLVNLTKLNLSGNQLTQVSESISQLVNLTQL 119

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPENE 176
            LS N L+  P  I ++  L +L L+ N L  +    S LVN     L     +++PE+ 
Sbjct: 120 SLSGNQLTQFPESISQLVNLTQLSLSRNQLTQVPESISQLVNLTQLNLSYNQLTQVPESI 179

Query: 177 DSEASTTKEDL------------------------ITMATRLS------VTSKELSLEGM 206
               + T+ DL                            T++S      V   +LSL G 
Sbjct: 180 SQLVNLTQLDLSVNKLTQVPESISQLVNLTQLNLSYNQLTQVSESISQLVNLTQLSLSGN 239

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            L+ +   I +   +T+L LS N + ++P  +S   +L  L LS N++    ++I + L 
Sbjct: 240 KLTQVSESISQLVNLTQLSLSGNKLTQVPESISQLVNLTQLSLSDNQLTQVSESI-SQLV 298

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
           +L+ L L +N L QV S+    +  L  LDLS N +  + E+   S L +L +L L   +
Sbjct: 299 NLTQLDLSSNQLTQV-SESISQLVNLTQLDLSSNQLTQVSES--ISQLVNLTQLNLSINK 355

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L + P  I +L  L  L+LS N L  +PE    L +LT+LDL  N I+ +P  L  L P+
Sbjct: 356 LTQVPESISQLVNLTWLNLSDNQLTQVPESISQLVNLTQLDLFGNKITEIPDWLEEL-PN 414

Query: 386 LQALRLDGNPL 396
           L+ L L  NPL
Sbjct: 415 LKELDLRQNPL 425



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 186/382 (48%), Gaps = 43/382 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++KL++ GN+LT +S + I+    LT+L  S N L   PE+I  L  L +L L +N++  
Sbjct: 93  LTKLNLSGNQLTQVSES-ISQLVNLTQLSLSGNQLTQFPESISQLVNLTQLSLSRNQLTQ 151

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P SIS   +L +  +  N L+ +P  + +L  L  LDL  N+L +      QL  L+ L
Sbjct: 152 VPESISQLVNLTQLNLSYNQLTQVPESISQLVNLTQLDLSVNKLTQVPESISQLVNLTQL 211

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +LS N L+ +   I ++  L +L L+GN L                            ++
Sbjct: 212 NLSYNQLTQVSESISQLVNLTQLSLSGNKL----------------------------TQ 243

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            S +   L+ +         +LSL G  L+ +P  I +   +T+L LS N + ++   +S
Sbjct: 244 VSESISQLVNLT--------QLSLSGNKLTQVPESISQLVNLTQLSLSDNQLTQVSESIS 295

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L  L LS N++    ++I + L +L+ L L +N L QV S+    +  L  L+LS 
Sbjct: 296 QLVNLTQLDLSSNQLTQVSESI-SQLVNLTQLDLSSNQLTQV-SESISQLVNLTQLNLSI 353

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +  +PE+   S L +L  L L   QL + P  I +L  L  LDL  N +  IP+  + 
Sbjct: 354 NKLTQVPES--ISQLVNLTWLNLSDNQLTQVPESISQLVNLTQLDLFGNKITEIPDWLEE 411

Query: 359 LTSLTELDLSDNNISALPPELG 380
           L +L ELDL  N +   P  LG
Sbjct: 412 LPNLKELDLRQNPLPISPEILG 433


>gi|421090489|ref|ZP_15551281.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000703|gb|EKO51331.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 448

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 191/408 (46%), Gaps = 43/408 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G+KL  LS   I     L +L  + N L  +P  IG L  L  LDL+ N +  +P 
Sbjct: 53  LNLSGSKLATLSKE-IGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPK 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    +G N L+ LP E+G+L  L  L+L  N+L     +  QL+ L VL+L 
Sbjct: 112 EIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLD 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL---------LKYLRSRLP 173
            N L+ LP +IG++  L+ L   GN L T    +  G    L         L  LR  + 
Sbjct: 172 LNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEI--GQLQKLQELNLGFNRLTTLREEVV 229

Query: 174 ENEDSEA-STTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
           + ++ +        L T+   +    K  EL+L G+ L  +P  I +   +  L+L+   
Sbjct: 230 QLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTH 289

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           +  LP E+   + LQ L L  N++   P+ I   L  L  L L NNPLR +P    K+I 
Sbjct: 290 LTILPKEIGQLSKLQKLYLYGNQLTTLPEEI-GQLKKLQELYLGNNPLRTLP----KEIE 344

Query: 291 MLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
            LQ                      LQ LYL   Q+   P +I +LQ L+ L+L  N L 
Sbjct: 345 QLQ---------------------KLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLT 383

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           ++P+    L +L EL+L  N ++ LP E+G L+  L+ L L  NP+ S
Sbjct: 384 TLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQ-KLRKLNLYNNPIAS 430



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 23/168 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL + GN+LT L    I     L EL    N L  +P+ I  L +L  L L  N+I +
Sbjct: 303 LQKLYLYGNQLTTLPEE-IGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITT 361

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
            P  I    +L E  +G N L+ LP E+G+L  L  L+L  NQ                 
Sbjct: 362 FPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQ----------------- 404

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
                L+ LP E+G++  LRKL L  NP+ + +   +    P  + Y 
Sbjct: 405 -----LATLPKEVGQLQKLRKLNLYNNPIASEKIERIRKLLPKCIIYF 447


>gi|418726507|ref|ZP_13285118.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960417|gb|EKO24171.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 595

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 130/416 (31%), Positives = 190/416 (45%), Gaps = 28/416 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ +
Sbjct: 165 LQKLWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLAT 223

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+ NN L+  P E+G+L  L  L    N+L     E  QL+ L  L
Sbjct: 224 LPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTL 283

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L NN L+  P EIG++  L+ L L  NP        +    P     LR  + EN    
Sbjct: 284 NLVNNRLTVFPKEIGQLQNLQDLELLMNPFSLKERKRIQKLFPDSNLDLRE-VAENGVYR 342

Query: 180 ASTTKEDLITMATRLSVTSKELS------------LEGMNL-----SAIPSEIWEAGEIT 222
                ++       LS+  K+ S            L G+NL     S +P EI     + 
Sbjct: 343 NLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLK 402

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
            L L  N ++ +P E+    +L+ L L  N+++  P  I   L +L  L L  N L+  P
Sbjct: 403 YLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEI-GQLRNLQKLSLHQNTLKIFP 461

Query: 283 SDGFKDIPMLQILDLSYN--IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
           ++  + +  LQ LDLS N     L E      L +LQ L L+R QL     +I +LQ L+
Sbjct: 462 AE-IEQLKKLQKLDLSVNQFTTFLKE---IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQ 517

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            LDL+ N    +P+    L  L  LDL +N ++ LP E+G L+ +LQ L L  N L
Sbjct: 518 ELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQ-NLQWLYLQNNQL 572



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 125/423 (29%), Positives = 191/423 (45%), Gaps = 46/423 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G KLT L    I     L EL    NLL  +P+ I  L  L  LDL  N++ + P+
Sbjct: 53  LNLSGEKLTALPKE-IGQLKNLQELNLKWNLLTVLPKEIEQLENLQELDLRDNQLATFPA 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L    +  N L  LP E+G+L  L  L L+ N+L  +  E  QL+ L  L LS
Sbjct: 112 VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEAS 181
            N L+ LP EIG++  L+ L L  N   TL         P  +  L++    N +D++ +
Sbjct: 172 ENRLTALPKEIGQLKNLQTLDLQDNQFTTL---------PKEIGQLQNLQTLNLQDNQLA 222

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
           T   ++  +        +EL L    L+  P EI +   +  L    N +  LP E+   
Sbjct: 223 TLPVEIGQLQ-----NLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQL 277

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-------------------LRQVP 282
            +LQTL L  N++  +P  I   L +L  L+L  NP                   LR+V 
Sbjct: 278 QNLQTLNLVNNRLTVFPKEI-GQLQNLQDLELLMNPFSLKERKRIQKLFPDSNLDLREVA 336

Query: 283 SDG-FKDIPM-----LQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDIL 334
            +G ++++ +     L++ +LS       ++ P       +L+ L L        P +I 
Sbjct: 337 ENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEIS 396

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           RL+ L+ L L  N L++IP     L +L  L+L  N +  LP E+G L  +LQ L L  N
Sbjct: 397 RLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLR-NLQKLSLHQN 455

Query: 395 PLR 397
            L+
Sbjct: 456 TLK 458



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 29/289 (10%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS   L+ LP EIG++  L++L L  N                LL  L   + 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWN----------------LLTVLPKEIE 91

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSR 228
           + E+ +    +++   +AT  +V  +   LE ++LS      +P+EI     +  L L +
Sbjct: 92  QLENLQELDLRDN--QLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYK 149

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +   P E+    +LQ L LS N++   P  I   L +L  L L +N    +P +    
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQDNQFTTLPKE-IGQ 207

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  LQ L+L  N +A+LP       L +LQELYLR  +L   P +I +LQ L++L   +N
Sbjct: 208 LQNLQTLNLQDNQLATLP--VEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPEN 265

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L ++P+    L +L  L+L +N ++  P E+G L+ +LQ L L  NP 
Sbjct: 266 RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQ-NLQDLELLMNPF 313



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 114/217 (52%), Gaps = 6/217 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L+L G  L+A+P EI +   + +L+L  N +  LP E+    +LQ L
Sbjct: 40  LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIEQLENLQEL 99

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            L  N++  +P A++  L  L  L L  N L  +P++    +  LQ L L  N + + P+
Sbjct: 100 DLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IGRLQNLQDLGLYKNKLTTFPK 157

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +LQ+L+L   +L   P +I +L+ L+ LDL  N   ++P+    L +L  L+
Sbjct: 158 --EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLN 215

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L DN ++ LP E+G L+ +LQ L L  N L    + I
Sbjct: 216 LQDNQLATLPVEIGQLQ-NLQELYLRNNRLTVFPKEI 251



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 14/243 (5%)

Query: 29  IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 88
           +  K+     P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+
Sbjct: 359 LEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEI 418

Query: 89  GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 147
           G+L  L  L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N
Sbjct: 419 GQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVN 478

Query: 148 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 207
              T    +        L   R++L  N  +E    +              +EL L    
Sbjct: 479 QFTTFLKEIGKLENLQTLNLQRNQLT-NLTAEIGQLQ------------NLQELDLNDNQ 525

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
            + +P EI +  ++  LDL  N +  LP E+    +LQ L L  N++       +  L  
Sbjct: 526 FTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRKLLP 585

Query: 268 LSC 270
           L C
Sbjct: 586 LKC 588



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 7/144 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N L +     I     L +L  S N      + IG L  L  L+L +N++ +
Sbjct: 447 LQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFLKEIGKLENLQTLNLQRNQLTN 505

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           + + I    +L E  + +N  + LP E+GKL KL TLDL +NQL     E  QL+ L  L
Sbjct: 506 LTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 565

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL 143
            L NN LS     + +   +RKLL
Sbjct: 566 YLQNNQLS-----LKEQERIRKLL 584


>gi|255089435|ref|XP_002506639.1| predicted protein [Micromonas sp. RCC299]
 gi|226521912|gb|ACO67897.1| predicted protein [Micromonas sp. RCC299]
          Length = 392

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 165/343 (48%), Gaps = 64/343 (18%)

Query: 39  PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 98
           P  +G L+ L  L+L  N +  +P  ISG  SL + ++ +N L+++PAE+G+L+ L  L 
Sbjct: 61  PADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQLASLKDLR 120

Query: 99  LHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           + +N+L++    +      L+ L+LS+N L+ +P EIG++T+L  L L GN L ++    
Sbjct: 121 ITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSV---- 176

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                PA +  L                       T L+V    L L+G  L+++P+EI 
Sbjct: 177 -----PAEIGRL-----------------------TSLTV----LRLDGNRLTSVPAEIG 204

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
               +T L LS N +  +P E+    SL  L L  NK+   P A +  L+SL+ L+LD N
Sbjct: 205 RLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSVP-AEIGRLTSLTVLRLDGN 263

Query: 277 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
            L  VP++                            L  L+ L+L   +L   P +I RL
Sbjct: 264 RLTSVPAE-------------------------IGQLTALEGLFLDGNKLTSVPAEIGRL 298

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
             L  L LS N L S+P     LTSL E  L +N ++++P E+
Sbjct: 299 TSLHALFLSDNKLTSVPAEIGRLTSLREFTLHNNKLTSVPAEI 341



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 139/323 (43%), Gaps = 64/323 (19%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKL 91
           N L  +PE I  L+ L  L L  N++ S+P+ I    SL +  + NN L  LP + +G+L
Sbjct: 78  NELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQLASLKDLRITNNELEDLPGKIIGRL 137

Query: 92  SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
           + L  L+L  N+L     E  +L  L+ L L  N L+ +P EIG++T+L  L L GN L 
Sbjct: 138 TSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLT 197

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
           ++         PA +  L S                 +T           L L G  L++
Sbjct: 198 SV---------PAEIGRLTS-----------------LTY----------LRLSGNKLTS 221

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +P+EI     +T L L  N +  +P E+    SL  L L  N++   P A +  L++L  
Sbjct: 222 VPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVP-AEIGQLTALEG 280

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 330
           L LD N L  VP++                            L  L  L+L   +L   P
Sbjct: 281 LFLDGNKLTSVPAE-------------------------IGRLTSLHALFLSDNKLTSVP 315

Query: 331 TDILRLQQLRILDLSQNSLQSIP 353
            +I RL  LR   L  N L S+P
Sbjct: 316 AEIGRLTSLREFTLHNNKLTSVP 338



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 105/200 (52%), Gaps = 5/200 (2%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L+L    L+ +P  I     +T L LS N +  +P E+   ASL+ L ++ N+++D P  
Sbjct: 73  LNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQLASLKDLRITNNELEDLPGK 132

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I+  L+SL+ L L +N L  VP++    +  L  L L  N + S+P       L  L  L
Sbjct: 133 IIGRLTSLTGLNLSDNRLTSVPAE-IGRLTSLTGLGLDGNKLTSVP--AEIGRLTSLTVL 189

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            L   +L   P +I RL  L  L LS N L S+P     LTSLT L L  N ++++P E+
Sbjct: 190 RLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEI 249

Query: 380 GLLEPSLQALRLDGNPLRSI 399
           G L  SL  LRLDGN L S+
Sbjct: 250 GRL-TSLTVLRLDGNRLTSV 268



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 119/262 (45%), Gaps = 37/262 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  N+L  L   +I   T LT L  S N L  +P  IG L+ L  L L  N++ S
Sbjct: 116 LKDLRITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTS 175

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I    SL    +  N L+++PAE+G+L+ L  L L  N+L     E  +L  L+ L
Sbjct: 176 VPAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTGL 235

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N L+ +P EIG++T+L  L L GN L ++         PA +  L           
Sbjct: 236 GLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSV---------PAEIGQL----------- 275

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             T  E L               L+G  L+++P+EI     +  L LS N +  +P E+ 
Sbjct: 276 --TALEGLF--------------LDGNKLTSVPAEIGRLTSLHALFLSDNKLTSVPAEIG 319

Query: 240 SCASLQTLILSRNKIKDWPDAI 261
              SL+   L  NK+   P  I
Sbjct: 320 RLTSLREFTLHNNKLTSVPAEI 341



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 100/194 (51%), Gaps = 5/194 (2%)

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
           +LS  P+++     +  L+L  N + ELP  +S   SL  L LS NK+   P A +  L+
Sbjct: 56  SLSPAPADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVP-AEIGQLA 114

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
           SL  L++ NN L  +P      +  L  L+LS N + S+P       L  L  L L   +
Sbjct: 115 SLKDLRITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVP--AEIGRLTSLTGLGLDGNK 172

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L   P +I RL  L +L L  N L S+P     LTSLT L LS N ++++P E+G L  S
Sbjct: 173 LTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIGRL-TS 231

Query: 386 LQALRLDGNPLRSI 399
           L  L LDGN L S+
Sbjct: 232 LTGLGLDGNKLTSV 245



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L ++GNKLT +    I   T LT L    N L  +P  IG L+ L  L L  N++ S
Sbjct: 232 LTGLGLDGNKLTSVPAE-IGRLTSLTVLRLDGNRLTSVPAEIGQLTALEGLFLDGNKLTS 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 115
           +P+ I    SL   ++ +N L+++PAE+G+L+ L    LH+N+L     E  +LR
Sbjct: 291 VPAEIGRLTSLHALFLSDNKLTSVPAEIGRLTSLREFTLHNNKLTSVPAEIWRLR 345



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
           AP D+ RL  L  L+L  N L  +PEG   LTSLT+L LSDN ++++P E+G L  SL+ 
Sbjct: 60  APADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQL-ASLKD 118

Query: 389 LRLDGNPLRSIRRTILDR 406
           LR+  N L  +   I+ R
Sbjct: 119 LRITNNELEDLPGKIIGR 136



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 1/95 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L ++GN+LT +    I   T L  L    N L  +P  IG L+ L  L L  N++ S
Sbjct: 255 LTVLRLDGNRLTSVPAE-IGQLTALEGLFLDGNKLTSVPAEIGRLTSLHALFLSDNKLTS 313

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 95
           +P+ I    SL EF + NN L+++PAE+ +L + G
Sbjct: 314 VPAEIGRLTSLREFTLHNNKLTSVPAEIWRLRERG 348


>gi|254410565|ref|ZP_05024344.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196182771|gb|EDX77756.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1117

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 187/397 (47%), Gaps = 49/397 (12%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           +TEL  S   +  +PE IG L+ L  LDL +N+I  IP  I    +L +  +G N ++ +
Sbjct: 19  VTELDLSGKGITEIPECIGQLTNLQELDLRENQITEIPECIGQLTNLKKLIIGKNKITEI 78

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 144
           P  + +L+ L  L L  NQ+ E                      +P  IG++T L+KL L
Sbjct: 79  PGCISQLTNLRFLGLWENQITE----------------------IPEFIGQLTNLKKLSL 116

Query: 145 TGNPLRTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSKE 200
           + N +  +         P  + YL +     L  N+ +E      + I+  T L    + 
Sbjct: 117 SANQITEI---------PKFIGYLNNLQLLGLSRNQITEIP----ECISQLTNL----QN 159

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L L    ++ IP  I +   +  L L  N I E+P  +    +LQ L L+ N+I + P+ 
Sbjct: 160 LYLHDNKITEIPECIGQLTNLQNLVLIGNQITEIPEFIGKLTNLQNLGLTGNQITEIPEF 219

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I   L++L  L    N + ++P +    +  LQIL+L  N I  +PE      L +LQ L
Sbjct: 220 I-GKLTNLQLLYFGGNQITEMP-ECIGQLNNLQILNLWKNQITEMPE--CIGQLNNLQIL 275

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            L + Q+ E P  I +L  L+ LDL  N +  IPE    L +L EL L++N I+ +P  +
Sbjct: 276 NLWKNQITEIPECIGQLNNLQELDLDDNKITEIPECIGQLINLQELSLTENQITEIPECI 335

Query: 380 GLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
           G L  +LQ L LD NPL  + R+    G   +  YLK
Sbjct: 336 GQL-TNLQKLILDNNPLNPVVRSAYQSGLDELKAYLK 371



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 130/271 (47%), Gaps = 15/271 (5%)

Query: 18  LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
            I   T L +L  S N +  +P+ IG L+ L  L L +N+I  IP  IS   +L   Y+ 
Sbjct: 104 FIGQLTNLKKLSLSANQITEIPKFIGYLNNLQLLGLSRNQITEIPECISQLTNLQNLYLH 163

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 136
           +N ++ +P  +G+L+ L  L L  NQ+ E      +L  L  L L+ N ++ +P  IGK+
Sbjct: 164 DNKITEIPECIGQLTNLQNLVLIGNQITEIPEFIGKLTNLQNLGLTGNQITEIPEFIGKL 223

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           T L+ L   GN +  +   +       +L   ++++         T   + I     L +
Sbjct: 224 TNLQLLYFGGNQITEMPECIGQLNNLQILNLWKNQI---------TEMPECIGQLNNLQI 274

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
               L+L    ++ IP  I +   + +LDL  N I E+P  +    +LQ L L+ N+I +
Sbjct: 275 ----LNLWKNQITEIPECIGQLNNLQELDLDDNKITEIPECIGQLINLQELSLTENQITE 330

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            P+ I   L++L  L LDNNPL  V    ++
Sbjct: 331 IPECI-GQLTNLQKLILDNNPLNPVVRSAYQ 360



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 2/150 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  NK+T +    I   T L  L+   N +  +PE IG L+ L  L L  N+I  
Sbjct: 157 LQNLYLHDNKITEIPE-CIGQLTNLQNLVLIGNQITEIPEFIGKLTNLQNLGLTGNQITE 215

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  I    +L   Y G N ++ +P  +G+L+ L  L+L  NQ+ E      QL  L +L
Sbjct: 216 IPEFIGKLTNLQLLYFGGNQITEMPECIGQLNNLQILNLWKNQITEMPECIGQLNNLQIL 275

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           +L  N ++ +P  IG++  L++L L  N +
Sbjct: 276 NLWKNQITEIPECIGQLNNLQELDLDDNKI 305


>gi|195443980|ref|XP_002069663.1| GK11454 [Drosophila willistoni]
 gi|261277889|sp|B4N9T4.1|SUR8_DROWI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194165748|gb|EDW80649.1| GK11454 [Drosophila willistoni]
          Length = 641

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 180/396 (45%), Gaps = 51/396 (12%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-- 107
           RLDL ++ I  IP+++  C  L E Y+ +N +  LP E+G L  L  L L+ N L     
Sbjct: 164 RLDLSKSSITVIPNTVKECVHLTELYLYSNKIGQLPTEIGCLVNLRNLALNENSLTSLPD 223

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 167
            ++ C  +L VLDL +N L+ +PP I ++ +L  L L  N + T+   L       L+  
Sbjct: 224 SLQHCN-QLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITTVADDL-----RQLVNL 277

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL------EGMNLSA----------I 211
               L EN+  E  +    L+ + T L V+   L          +NLSA          I
Sbjct: 278 TMLSLRENKIRELGSAIGALVNLTT-LDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDI 336

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P  I     + +L L  N +  +P  L +C S+    +  N I   PD +L SL+ L+ +
Sbjct: 337 PDSIGNLKSLVRLGLRYNRLTSVPASLKNCKSMDEFNVEGNGITQLPDGMLASLNGLTII 396

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP----------------ENPPFSSLP 314
            L  N     P+ G      +  ++L +N I  +P                EN   ++LP
Sbjct: 397 TLSRNQFTSYPTGGPAQFTNVYNINLEHNRIDKIPYGIFSRAKGLTKLNMKENM-LTALP 455

Query: 315 -------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                  ++ EL L    L++ P DI+ LQ L IL LS N L+ IP    NL  L  LDL
Sbjct: 456 LDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDL 515

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            +N I  LP E+GLL   LQ L L  N +  + R+I
Sbjct: 516 EENRIEVLPHEIGLLH-ELQRLILQTNQITMLPRSI 550



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 202/472 (42%), Gaps = 92/472 (19%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  + +TV+ N  +     LTEL    N +  +P  IG L  L  L L++N + S
Sbjct: 162 IKRLDLSKSSITVIPNT-VKECVHLTELYLYSNKIGQLPTEIGCLVNLRNLALNENSLTS 220

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------ 114
           +P S+  C  L    + +N L+ +P  + +L  L TL L  N++     +  QL      
Sbjct: 221 LPDSLQHCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITTVADDLRQLVNLTML 280

Query: 115 ------------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
                              L+ LD+S+N L  LP +IG    L  L L  N L  +  S+
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 157 VN--------------GPTPALLKYLRSRLPENEDSEASTTKED----------LITMAT 192
            N                 PA LK  +S    N +    T   D          +IT++ 
Sbjct: 341 GNLKSLVRLGLRYNRLTSVPASLKNCKSMDEFNVEGNGITQLPDGMLASLNGLTIITLS- 399

Query: 193 RLSVTSK------------ELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELS 239
           R   TS              ++LE   +  IP  I+  A  +TKL++  N +  LP ++ 
Sbjct: 400 RNQFTSYPTGGPAQFTNVYNINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIG 459

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  ++  L L+ N ++  PD I+ +L +L  L L NN L+++P +   ++  L+ILDL  
Sbjct: 460 TWVNMVELNLATNALQKLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNLRKLRILDLEE 517

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N I  LP       L  LQ L L+  Q+   P  I  L QL  L +S+N+LQ +PE   +
Sbjct: 518 NRIEVLPHE--IGLLHELQRLILQTNQITMLPRSIGHLSQLTHLSVSENNLQFLPEEIGS 575

Query: 359 LTSLTELDLSDN-------------------NI-----SALPPELGLLEPSL 386
           L SL  L ++ N                   NI     S +PPE+    PSL
Sbjct: 576 LESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPLSTIPPEIQAGGPSL 627



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           R + ++ LDLS++S+  IP   K    LTEL L  N I  LP E+G L  +L+ L L+ N
Sbjct: 158 RDEGIKRLDLSKSSITVIPNTVKECVHLTELYLYSNKIGQLPTEIGCL-VNLRNLALNEN 216

Query: 395 PLRSIRRTILDRGTKAVLKYLKDKIPE 421
            L S+  ++       VL    +K+ E
Sbjct: 217 SLTSLPDSLQHCNQLKVLDLRHNKLAE 243


>gi|421110784|ref|ZP_15571275.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803881|gb|EKS10008.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 371

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 171/365 (46%), Gaps = 70/365 (19%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P+ IG+L  L +LDL  N I  +P  I    SL +  +  N L+ LP E+GKL  L
Sbjct: 49  LTALPKEIGNLQHLQKLDLSFNTITVLPQEIGNLQSLQDLNLWENELTTLPKEIGKLQSL 108

Query: 95  GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 154
             L L  NQL                      + LP EIGK+ +L++L+L  N L T+  
Sbjct: 109 QRLTLWENQL----------------------TTLPKEIGKLQSLQELILGKNQLTTIPK 146

Query: 155 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 214
                     L+YL+                               LSL    L+AIP E
Sbjct: 147 EFWQ------LQYLQR------------------------------LSLSFNQLTAIPKE 170

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           I +   + ++D + N ++ LP E+ +   LQ L LS NKI   P  I  +L  L  L L 
Sbjct: 171 IEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKEI-GNLQHLQKLYLS 229

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSY----NIASLPENPPFSSLPHLQELYLRRMQLREAP 330
           +N +  +P    K+I  LQ L+  Y     + +LP+      L +L+ LYL    L   P
Sbjct: 230 SNKITILP----KEIGNLQKLEYLYLEVNQLTTLPKE--IGQLRNLKVLYLDHNNLANIP 283

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            +I +LQ L+ L L +N L ++P+  +NL SL  LDLS+N +++ P E+G L+  L+ LR
Sbjct: 284 KEIGKLQNLQTLSLDRNKLTTLPKEIENLQSLESLDLSNNPLTSFPEEIGKLQ-HLKWLR 342

Query: 391 LDGNP 395
           L+  P
Sbjct: 343 LENIP 347



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 85/159 (53%), Gaps = 2/159 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+LT +    I     L E+ ++ N L  +P+ IG+L  L +L L  N+I  
Sbjct: 154 LQRLSLSFNQLTAIPKE-IEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITI 212

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I     L + Y+ +N ++ LP E+G L KL  L L  NQL     E  QLR L VL
Sbjct: 213 LPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNQLTTLPKEIGQLRNLKVL 272

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
            L +N+L+ +P EIGK+  L+ L L  N L TL   + N
Sbjct: 273 YLDHNNLANIPKEIGKLQNLQTLSLDRNKLTTLPKEIEN 311



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L+L   +L   P +I  LQ L+ LDLS N++  +P+   NL SL +L+L +N ++ LP E
Sbjct: 42  LHLNAKKLTALPKEIGNLQHLQKLDLSFNTITVLPQEIGNLQSLQDLNLWENELTTLPKE 101

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTI 403
           +G L+ SLQ L L  N L ++ + I
Sbjct: 102 IGKLQ-SLQRLTLWENQLTTLPKEI 125


>gi|418701530|ref|ZP_13262455.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759612|gb|EKR25824.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 423

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 177/359 (49%), Gaps = 24/359 (6%)

Query: 42  IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 101
           IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L  L LHS
Sbjct: 60  IGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHS 119

Query: 102 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 160
           N+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L        
Sbjct: 120 NELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL-------- 171

Query: 161 TPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 218
            P  ++ L+S   L  N +   + +KE        L  T + L L    L  IP EI + 
Sbjct: 172 -PTEIEQLKSLKNLDLNNNEFTTVSKE------VMLLETLENLDLRSNKLKTIPKEIRQL 224

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
             +  L L+ N +  LP E+    +L+TL L  N+ + +P  IL   + L      N  L
Sbjct: 225 KSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQ-L 283

Query: 279 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
            + P +    +  L+ L L +N I +LP     + LP LQEL+L   ++   P +IL+L+
Sbjct: 284 VEFPKE-VGQLKSLKYLSLYHNQITTLP--VEVTQLPDLQELHLSGNKITILPKEILQLK 340

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L  L LS N L ++P+    L  L  L+L +N ++ LP E+  L+ +LQ L LD NP+
Sbjct: 341 NLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK-NLQRLELDSNPI 398



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 131/311 (42%), Gaps = 42/311 (13%)

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LDLS   L  L  +IG++  L+KL L GN              P +L     +L + +  
Sbjct: 46  LDLSFLGLKTLTNKIGQLKNLQKLDLGGN-------------EPTILSKEIWQLKDLQKL 92

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
             +  K  ++          +ELSL    L  +P EI +   + KL+L  N +  LP E+
Sbjct: 93  NLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEI 152

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
               +LQ L L  NK+   P  I   L SL  L L+NN    V S     +  L+ LDL 
Sbjct: 153 GQLQNLQELSLLSNKLISLPTEI-EQLKSLKNLDLNNNEFTTV-SKEVMLLETLENLDLR 210

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ------- 350
            N + ++P+      L  L+ L L   QL   P +I +LQ L+ L+L +N  Q       
Sbjct: 211 SNKLKTIPK--EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEIL 268

Query: 351 ----------------SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
                             P+    L SL  L L  N I+ LP E+  L P LQ L L GN
Sbjct: 269 ELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQL-PDLQELHLSGN 327

Query: 395 PLRSIRRTILD 405
            +  + + IL 
Sbjct: 328 KITILPKEILQ 338



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 10/208 (4%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           + L L  + L  + ++I +   + KLDL  N    L  E+     LQ L L+ NK+   P
Sbjct: 44  RNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLP 103

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
             I   L +L  L L +N L  +P +   FK+   LQ L+L  N +  LP+      L +
Sbjct: 104 KEI-GQLQNLQELSLHSNELVNLPKEIGQFKN---LQKLNLDNNKLTVLPK--EIGQLQN 157

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           LQEL L   +L   PT+I +L+ L+ LDL+ N   ++ +    L +L  LDL  N +  +
Sbjct: 158 LQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTI 217

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P E+  L+ SL+ L L GN L S+ + I
Sbjct: 218 PKEIRQLK-SLKVLMLTGNQLTSLPKEI 244


>gi|418670524|ref|ZP_13231895.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|418725048|ref|ZP_13283724.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|418729740|ref|ZP_13288287.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|421121420|ref|ZP_15581717.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|409961430|gb|EKO25175.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|410345854|gb|EKO96924.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410753906|gb|EKR15564.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410775918|gb|EKR55909.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 423

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 177/359 (49%), Gaps = 24/359 (6%)

Query: 42  IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 101
           IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L  L LHS
Sbjct: 60  IGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHS 119

Query: 102 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 160
           N+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L        
Sbjct: 120 NELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL-------- 171

Query: 161 TPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 218
            P  ++ L+S   L  N +   + +KE        L  T + L L    L  IP EI + 
Sbjct: 172 -PTEIEQLKSLKNLDLNHNEFTTVSKE------VMLLETLENLDLRSNKLKTIPKEIRQL 224

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
             +  L L+ N +  LP E+    +L+TL L  N+ + +P  IL   + L      N  L
Sbjct: 225 KSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQ-L 283

Query: 279 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
            + P +    +  L+ L L +N I +LP     + LP LQEL+L   ++   P +IL+L+
Sbjct: 284 VEFPKE-VGQLKSLKYLSLYHNQITTLP--VEVTQLPDLQELHLSGNKITILPKEILQLK 340

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L  L LS N L ++P+    L  L  L+L +N ++ LP E+  L+ +LQ L LD NP+
Sbjct: 341 NLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLK-NLQRLELDSNPI 398



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 151/328 (46%), Gaps = 43/328 (13%)

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
            L  L  ++G+L  L  LDL  N+      E  QL+ L  L+L+NN L+ LP EIG++  
Sbjct: 52  GLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQN 111

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L++L L  N        LVN P                  E    K              
Sbjct: 112 LQELSLHSN-------ELVNLP-----------------KEIGQFK------------NL 135

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L+L+   L+ +P EI +   + +L L  N +  LP E+    SL+ L L+ N+     
Sbjct: 136 QKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVS 195

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
             ++  L +L  L L +N L+ +P +  + +  L++L L+ N + SLP+      L +L+
Sbjct: 196 KEVML-LETLENLDLRSNKLKTIPKE-IRQLKSLKVLMLTGNQLTSLPK--EIEQLQNLK 251

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L L   + +  P +IL L+ L  L+L  N L   P+    L SL  L L  N I+ LP 
Sbjct: 252 TLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPV 311

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTILD 405
           E+  L P LQ L L GN +  + + IL 
Sbjct: 312 EVTQL-PDLQELHLSGNKITILPKEILQ 338



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 10/208 (4%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           + L L  + L  + ++I +   + KLDL  N    L  E+     LQ L L+ NK+   P
Sbjct: 44  RNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLP 103

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
             I   L +L  L L +N L  +P +   FK+   LQ L+L  N +  LP+      L +
Sbjct: 104 KEI-GQLQNLQELSLHSNELVNLPKEIGQFKN---LQKLNLDNNKLTVLPK--EIGQLQN 157

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           LQEL L   +L   PT+I +L+ L+ LDL+ N   ++ +    L +L  LDL  N +  +
Sbjct: 158 LQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTI 217

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P E+  L+ SL+ L L GN L S+ + I
Sbjct: 218 PKEIRQLK-SLKVLMLTGNQLTSLPKEI 244


>gi|421129189|ref|ZP_15589392.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359579|gb|EKP06671.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 400

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 165/352 (46%), Gaps = 61/352 (17%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL + ++ ++P  I    +L    + NN L+ LP E+G+L  L  L L  NQL  +  E
Sbjct: 51  LDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKE 110

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L  L LS N L+ LP EIG++  LR+L L  N L+TL         P  +  L+
Sbjct: 111 IGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTL---------PKEIGQLK 161

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           +                            ++L+L    L  +P EI +   + +L LS N
Sbjct: 162 NL---------------------------QQLNLYANQLKTLPKEIGQLQNLRELHLSYN 194

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            ++ L  E+    +LQ L L+ N++K  P  I   L +L  L L+NN  + VP +    +
Sbjct: 195 QLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEI-GQLKNLQMLDLNNNQFKTVPEE-IGQL 252

Query: 290 PMLQILDLSYN-IASLPE--------------NPPFSSLP-------HLQELYLRRMQLR 327
             LQ+LDL YN   ++PE              N  F ++P       +LQ L L   QL 
Sbjct: 253 KNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLT 312

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
             P +I +L+ LR L LS N L+++      L +L +L L DN ++ LP E+
Sbjct: 313 TLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 150/306 (49%), Gaps = 43/306 (14%)

Query: 96  TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 154
            LDL   +LK    E  QL+ L VL+L+NN L+ LP EIG++  L++L L+GN L T   
Sbjct: 50  VLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPK 109

Query: 155 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 214
            +        LK L++                              L L    L+ +P E
Sbjct: 110 EI------GQLKNLQT------------------------------LVLSKNRLTTLPKE 133

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           I +   + +L L+ N ++ LP E+    +LQ L L  N++K  P  I   L +L  L L 
Sbjct: 134 IGQLKNLRELYLNTNQLKTLPKEIGQLKNLQQLNLYANQLKTLPKEI-GQLQNLRELHLS 192

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
            N L+ + ++    +  LQ+LDL+ N + +LP+      L +LQ L L   Q +  P +I
Sbjct: 193 YNQLKTLSAE-IGQLQNLQVLDLNDNQLKTLPK--EIGQLKNLQMLDLNNNQFKTVPEEI 249

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
            +L+ L++LDL  N  +++PE    L +L  L L++N    +P E G L+ +LQ L L+ 
Sbjct: 250 GQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLK-NLQMLSLNA 308

Query: 394 NPLRSI 399
           N L ++
Sbjct: 309 NQLTTL 314



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 6/213 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L    L  +P EI +   +  L+L+ N +  LP E+    +LQ L
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQEL 97

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            LS N++  +P  I   L +L  L L  N L  +P +    +  L+ L L+ N + +LP+
Sbjct: 98  HLSGNQLTTFPKEI-GQLKNLQTLVLSKNRLTTLPKE-IGQLKNLRELYLNTNQLKTLPK 155

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +LQ+L L   QL+  P +I +LQ LR L LS N L+++      L +L  LD
Sbjct: 156 --EIGQLKNLQQLNLYANQLKTLPKEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLD 213

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L+DN +  LP E+G L+ +LQ L L+ N  +++
Sbjct: 214 LNDNQLKTLPKEIGQLK-NLQMLDLNNNQFKTV 245



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 4/113 (3%)

Query: 292 LQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
           +++LDLS   + +LP+      L +LQ L L   QL   P +I +LQ L+ L LS N L 
Sbjct: 48  VRVLDLSEQKLKTLPK--EIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLT 105

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           + P+    L +L  L LS N ++ LP E+G L+ +L+ L L+ N L+++ + I
Sbjct: 106 TFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLK-NLRELYLNTNQLKTLPKEI 157


>gi|325190106|emb|CCA24588.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 780

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 226/490 (46%), Gaps = 92/490 (18%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP-ETIGSLSRLIRLDLHQNRIL 59
           +  L V+ N+L+ L  +L    + LT L   KN L  +  +   +  RLI LDL QNR++
Sbjct: 195 LHALSVQSNQLSCLPKSL-RDLSALTSLHLCKNQLVSIERDAFLAFHRLIVLDLRQNRLV 253

Query: 60  SIP---SSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVEACQL- 114
            +P   S+ +    L   ++G N L+ +P +       +  LDL  NQL+        L 
Sbjct: 254 EMPYLPSTKNSNQVLDRVFLGYNRLTEIPESTFVTRDSITLLDLRDNQLEALPTAIATLY 313

Query: 115 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR--- 171
           +L  LDLSNN+L+ LP  +G +  L +L L GNP+R +R +++      L K+LR+R   
Sbjct: 314 KLKSLDLSNNALTDLPHSLGYIKQLTRLHLDGNPMRAIRRAVIVAGCQTLKKHLRTREGP 373

Query: 172 ---LPE-----------------NEDS--EASTTK-EDLITMATRLSVTSKELSLEGMNL 208
              +PE                 N+DS  + STT+  D      R S  + ++ L   NL
Sbjct: 374 PPQVPEEYLECEEFDDNWHCVKDNKDSIGDTSTTELADETHYLYRESACTFKMDLRDKNL 433

Query: 209 SAIPSEI-WEA---------------GEITKLD-------------LSRNSIQELPPELS 239
           +  P E  W                  ++T LD             +  N +QE+ P + 
Sbjct: 434 TRFPLEHEWSTFTTFCSTLQTLNLSNNQLTTLDSIFGELKALVTLIVEENVLQEIHPFVV 493

Query: 240 SCASLQTLILSRNKIKDWPDAIL-------TSLSSLSCLKLDNNPLRQVPSDGFKDIPM- 291
           S   L+ L+L +N++       L       + +S L  + + NN L + P  GF    + 
Sbjct: 494 SLPRLKNLLLRKNQLTSTALQKLLRNKENGSIVSPLEEIDVSNNMLDRFPY-GFGAFGIS 552

Query: 292 LQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           L+ L LSYN              HLQ L    ++   A      L +L +L L+ N L  
Sbjct: 553 LETLILSYN--------------HLQTLADCPLEFSWA-----MLPRLGVLSLTDNKLND 593

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAV 411
           + + F+ L  L      +NN++ +P ELGL  P L AL L+GNP ++IR  I+ +G+ AV
Sbjct: 594 LGKVFE-LPGLASFSFENNNVTHVPCELGLC-PHLHALYLNGNPQKTIRSGIIAKGSHAV 651

Query: 412 LKYLKDKIPE 421
           L++L++K+P+
Sbjct: 652 LEHLRNKLPQ 661



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 156/378 (41%), Gaps = 93/378 (24%)

Query: 48  LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE- 106
           L ++D+  N+I +I   I    +L+ F M  NAL  LP    KL++L  LDL  NQ    
Sbjct: 79  LFKIDVSHNKITAIKDEIGNIITLSHFKMSQNALLGLPKGFFKLTQLVDLDLSHNQFSNC 138

Query: 107 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
           +  E  +LR L  L+LS+N+L+ LP  IG ++ L  L +  N L                
Sbjct: 139 FPAEVGKLRNLRDLNLSHNNLTALPESIGNLSFLESLSIDNNRL---------------- 182

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
               S LPE             +   TRL      LS++   LS +P  + +   +T L 
Sbjct: 183 ----SALPE------------AVGKCTRLHA----LSVQSNQLSCLPKSLRDLSALTSLH 222

Query: 226 LSRNSIQELPPELSSCASLQTLI---LSRNKIKDWPDAILTSLSS--LSCLKLDNNPLRQ 280
           L +N +  +  E  +  +   LI   L +N++ + P    T  S+  L  + L  N L +
Sbjct: 223 LCKNQLVSI--ERDAFLAFHRLIVLDLRQNRLVEMPYLPSTKNSNQVLDRVFLGYNRLTE 280

Query: 281 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
           +P   F     + +LDL                        R  QL   PT I  L +L+
Sbjct: 281 IPESTFVTRDSITLLDL------------------------RDNQLEALPTAIATLYKLK 316

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIR 400
            LDLS N+L  +P     +  LT                         L LDGNP+R+IR
Sbjct: 317 SLDLSNNALTDLPHSLGYIKQLTR------------------------LHLDGNPMRAIR 352

Query: 401 RTILDRGTKAVLKYLKDK 418
           R ++  G + + K+L+ +
Sbjct: 353 RAVIVAGCQTLKKHLRTR 370



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 139/285 (48%), Gaps = 20/285 (7%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS-I 61
           K+DV  NK+T + +  I +   L+    S+N L G+P+    L++L+ LDL  N+  +  
Sbjct: 81  KIDVSHNKITAIKDE-IGNIITLSHFKMSQNALLGLPKGFFKLTQLVDLDLSHNQFSNCF 139

Query: 62  PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVL 119
           P+ +    +L +  + +N L+ALP  +G LS L +L + +N+L      V  C  RL  L
Sbjct: 140 PAEVGKLRNLRDLNLSHNNLTALPESIGNLSFLESLSIDNNRLSALPEAVGKCT-RLHAL 198

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL-RSSLVNGPTPALLKYLRSRLPENEDS 178
            + +N LS LP  +  ++ L  L L  N L ++ R + +      +L   ++RL E    
Sbjct: 199 SVQSNQLSCLPKSLRDLSALTSLHLCKNQLVSIERDAFLAFHRLIVLDLRQNRLVEMPYL 258

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMN-LSAIPSEIWEAGE-ITKLDLSRNSIQELPP 236
            ++     ++                G N L+ IP   +   + IT LDL  N ++ LP 
Sbjct: 259 PSTKNSNQVLDRV-----------FLGYNRLTEIPESTFVTRDSITLLDLRDNQLEALPT 307

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
            +++   L++L LS N + D P + L  +  L+ L LD NP+R +
Sbjct: 308 AIATLYKLKSLDLSNNALTDLPHS-LGYIKQLTRLHLDGNPMRAI 351



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 170/423 (40%), Gaps = 68/423 (16%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+ +      +     L +L  S N L  +PE+IG+LS L  L +  NR+ ++P 
Sbjct: 128 LDLSHNQFSNCFPAEVGKLRNLRDLNLSHNNLTALPESIGNLSFLESLSIDNNRLSALPE 187

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA--CQLRLSVLDL 121
           ++  C  L    + +N LS LP  L  LS L +L L  NQL     +A     RL VLDL
Sbjct: 188 AVGKCTRLHALSVQSNQLSCLPKSLRDLSALTSLHLCKNQLVSIERDAFLAFHRLIVLDL 247

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEA 180
             N L  +P           L  T N  + L            L Y R + +PE+     
Sbjct: 248 RQNRLVEMP----------YLPSTKNSNQVLDR--------VFLGYNRLTEIPES----- 284

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                   T  TR S+T   L L    L A+P+ I    ++  LDLS N++ +LP  L  
Sbjct: 285 --------TFVTRDSITL--LDLRDNQLEALPTAIATLYKLKSLDLSNNALTDLPHSLGY 334

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSL--SCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
              L  L L  N ++    A++ +        L+    P  QVP +       L+  +  
Sbjct: 335 IKQLTRLHLDGNPMRAIRRAVIVAGCQTLKKHLRTREGPPPQVPEE------YLECEEFD 388

Query: 299 YNIASLPENPPFSSLPHLQEL-----YLRR-------MQLREAPTDILRLQQ-------- 338
            N   + +N          EL     YL R       M LR+       L+         
Sbjct: 389 DNWHCVKDNKDSIGDTSTTELADETHYLYRESACTFKMDLRDKNLTRFPLEHEWSTFTTF 448

Query: 339 ---LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
              L+ L+LS N L ++   F  L +L  L + +N +  + P +  L P L+ L L  N 
Sbjct: 449 CSTLQTLNLSNNQLTTLDSIFGELKALVTLIVEENVLQEIHPFVVSL-PRLKNLLLRKNQ 507

Query: 396 LRS 398
           L S
Sbjct: 508 LTS 510



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 96/217 (44%), Gaps = 13/217 (5%)

Query: 185 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 244
           +D ++ + R +  S  L L    L ++P +++   +  + D       E P E   C  L
Sbjct: 30  KDQLSRSLREARHSGFLRLPARQLESLPKQVYSLADFLEKD-------EKPWE---CIDL 79

Query: 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL 304
             + +S NKI    D I  ++ +LS  K+  N L  +P  GF  +  L  LDLS+N  S 
Sbjct: 80  FKIDVSHNKITAIKDEI-GNIITLSHFKMSQNALLGLPK-GFFKLTQLVDLDLSHNQFSN 137

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
                   L +L++L L    L   P  I  L  L  L +  N L ++PE     T L  
Sbjct: 138 CFPAEVGKLRNLRDLNLSHNNLTALPESIGNLSFLESLSIDNNRLSALPEAVGKCTRLHA 197

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
           L +  N +S LP  L  L  +L +L L  N L SI R
Sbjct: 198 LSVQSNQLSCLPKSLRDLS-ALTSLHLCKNQLVSIER 233



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 99/228 (43%), Gaps = 46/228 (20%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++  N+LT L +++      L  LI  +N+L  +   + SL RL  L L +N++ S
Sbjct: 452 LQTLNLSNNQLTTL-DSIFGELKALVTLIVEENVLQEIHPFVVSLPRLKNLLLRKNQLTS 510

Query: 61  IP--------SSISGCCSLAEFYMGNNALSALPAELGKLS-KLGTLDLHSNQLKEYCVEA 111
                      + S    L E  + NN L   P   G     L TL L  N L+   +  
Sbjct: 511 TALQKLLRNKENGSIVSPLEEIDVSNNMLDRFPYGFGAFGISLETLILSYNHLQ--TLAD 568

Query: 112 CQL--------RLSVLDLS----------------------NNSLSGLPPEIGKMTTLRK 141
           C L        RL VL L+                      NN+++ +P E+G    L  
Sbjct: 569 CPLEFSWAMLPRLGVLSLTDNKLNDLGKVFELPGLASFSFENNNVTHVPCELGLCPHLHA 628

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 189
           L L GNP +T+RS ++   + A+L++LR++LP+    E S  K  L T
Sbjct: 629 LYLNGNPQKTIRSGIIAKGSHAVLEHLRNKLPQ----EPSRGKRSLAT 672



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 99/426 (23%), Positives = 163/426 (38%), Gaps = 87/426 (20%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+L  L    IA+   L  L  S N L  +P ++G + +L RL L  N + +I  
Sbjct: 295 LDLRDNQLEALPT-AIATLYKLKSLDLSNNALTDLPHSLGYIKQLTRLHLDGNPMRAIRR 353

Query: 64  SI--SGCCSLA---------------------EF------------YMGNNALSALPAEL 88
           ++  +GC +L                      EF             +G+ + + L  E 
Sbjct: 354 AVIVAGCQTLKKHLRTREGPPPQVPEEYLECEEFDDNWHCVKDNKDSIGDTSTTELADET 413

Query: 89  GKLSKLGT----LDLHSNQLKEYCVEA--------CQLRLSVLDLSNNSLSGLPPEIGKM 136
             L +       +DL    L  + +E         C   L  L+LSNN L+ L    G++
Sbjct: 414 HYLYRESACTFKMDLRDKNLTRFPLEHEWSTFTTFCST-LQTLNLSNNQLTTLDSIFGEL 472

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L  L++  N L+ +   +V+ P          RL            ++L+    +L+ 
Sbjct: 473 KALVTLIVEENVLQEIHPFVVSLP----------RL------------KNLLLRKNQLTS 510

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA-SLQTLILSRNKIK 255
           T+ +  L      +I S + E      +D+S N +   P    +   SL+TLILS N ++
Sbjct: 511 TALQKLLRNKENGSIVSPLEE------IDVSNNMLDRFPYGFGAFGISLETLILSYNHLQ 564

Query: 256 DWPDAIL----TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL-SYNIASLPENPPF 310
              D  L      L  L  L L +N L  +      ++P L      + N+  +P     
Sbjct: 565 TLADCPLEFSWAMLPRLGVLSLTDNKLNDLGK--VFELPGLASFSFENNNVTHVP--CEL 620

Query: 311 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
              PHL  LYL     +   + I+      +L+  +N L   P   K   + T+L  +  
Sbjct: 621 GLCPHLHALYLNGNPQKTIRSGIIAKGSHAVLEHLRNKLPQEPSRGKRSLATTQLAQAVI 680

Query: 371 NISALP 376
           NI   P
Sbjct: 681 NIGKTP 686


>gi|307187771|gb|EFN72743.1| Leucine-rich repeat-containing protein 40 [Camponotus floridanus]
          Length = 604

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 221/504 (43%), Gaps = 138/504 (27%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L ++ N L +L +  I +  MLT +  S N LN +P  +G L RL+ L+L  N I  
Sbjct: 156 LHELYLKNNHLNMLESE-IGNLIMLTCMDLSYNNLNKLPIGMGYLVRLVTLNLSYNMIKE 214

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY------------- 107
           +P  ++   SL    +  N L  LP  LG+L K   +   SN LK++             
Sbjct: 215 LPPDMTSMRSLRILDVSFNQLEVLPP-LGELRKAEKIMFQSNNLKKFPDISGCSALTVLH 273

Query: 108 ------------CVEACQ----------------------LRLSVLDLSNNSLSGLPPEI 133
                       C+E                         + L V DLS+N++S +P  I
Sbjct: 274 LDNNNIPEIDSQCLETAGHLKKLTLQNNKIEVIPEEIIKLINLEVFDLSHNNISLIPFCI 333

Query: 134 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL---ITM 190
           G +  L++ ++ GN ++ +R+ ++   TP +L ++R    +  DS +  T+E L   I++
Sbjct: 334 GILPNLKQFVIKGNNIKNIRADIIRCGTPRILTHIR----QITDSTSVNTRELLQSSISV 389

Query: 191 ATR------LSVTSKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNSIQELPPELSSC 241
           + R      +   +K LSL G NL  +P E+ E      +T +DLSRN + EL  ++S  
Sbjct: 390 SVRCYPDKYMMKNTKLLSLAGQNLLDLPEEVLENAVEASVTTIDLSRNKLSELSDKMSIV 449

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
            S+  L L+ N +   P+ I                      + +K    LQILD+S N 
Sbjct: 450 ISVMDLKLTSNHLTHLPEWI---------------------GEKYK---YLQILDISKN- 484

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
                             YL+ +     P  I  L+ LR +DLS N    IPE   ++ S
Sbjct: 485 ------------------YLKSL-----PLSISCLKYLRDVDLSFNRFTEIPEAIYDVIS 521

Query: 362 LTE------------------------LDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
           L                          L+LS+NNI+ +PPELG L+ +L+ L L GN  +
Sbjct: 522 LESLIANDNVIAAIDVSALEKLKKLAVLNLSNNNIAHVPPELGNLK-NLRNLSLSGNCFK 580

Query: 398 SIRRTILDRGTKAVLKYLKDKIPE 421
             R+ IL + T+ +L YL++ IP+
Sbjct: 581 YPRQAILMKETEEILSYLRNLIPQ 604



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 182/400 (45%), Gaps = 43/400 (10%)

Query: 39  PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 98
           P  +GSL +L  ++L  N++ ++P        L E Y+ NN L+ L +E+G L  L  +D
Sbjct: 124 PPEVGSLHKLKIINLSDNKLENLPPQFYMLEELHELYLKNNHLNMLESEIGNLIMLTCMD 183

Query: 99  LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
           L  N L +  +    L RL  L+LS N +  LPP++  M +LR L ++ N L  L     
Sbjct: 184 LSYNNLNKLPIGMGYLVRLVTLNLSYNMIKELPPDMTSMRSLRILDVSFNQLEVL----- 238

Query: 158 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 217
             P   L K  +     N     +  K   I+  + L+V    L L+  N+  I S+  E
Sbjct: 239 -PPLGELRKAEKIMFQSN-----NLKKFPDISGCSALTV----LHLDNNNIPEIDSQCLE 288

Query: 218 -AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
            AG + KL L  N I+ +P E+    +L+   LS N I   P  I   L +L    +  N
Sbjct: 289 TAGHLKKLTLQNNKIEVIPEEIIKLINLEVFDLSHNNISLIPFCI-GILPNLKQFVIKGN 347

Query: 277 PLRQVPSDGFK-DIPML-----QILD-LSYNIASLPEN---------PPFSSLPHLQELY 320
            ++ + +D  +   P +     QI D  S N   L ++         P    + + + L 
Sbjct: 348 NIKNIRADIIRCGTPRILTHIRQITDSTSVNTRELLQSSISVSVRCYPDKYMMKNTKLLS 407

Query: 321 LRRMQLREAPTDILR---LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           L    L + P ++L       +  +DLS+N L  + +    + S+ +L L+ N+++ LP 
Sbjct: 408 LAGQNLLDLPEEVLENAVEASVTTIDLSRNKLSELSDKMSIVISVMDLKLTSNHLTHLPE 467

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
            +G     LQ L +  N L+S+  +I      + LKYL+D
Sbjct: 468 WIGEKYKYLQILDISKNYLKSLPLSI------SCLKYLRD 501



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 106/259 (40%), Gaps = 58/259 (22%)

Query: 200 ELSLEGMNLSAIPSEIWEAGEITK---------------------------LDLSRNS-- 230
           +L+L    LS +P ++W   E+T+                           LDLS NS  
Sbjct: 39  QLNLSSKGLSTVPDQVWNINELTEEELRDLHFELDYEHKEERWWEQEPLKTLDLSSNSLI 98

Query: 231 -----IQEL----------------PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
                IQ L                PPE+ S   L+ + LS NK+++ P      L  L 
Sbjct: 99  TIDDKIQFLTELSNLNLQNNLLEELPPEVGSLHKLKIINLSDNKLENLPPQFYM-LEELH 157

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSY-NIASLPENPPFSSLPHLQELYLRRMQLRE 328
            L L NN L  + S+   ++ ML  +DLSY N+  LP    +  L  L  L L    ++E
Sbjct: 158 ELYLKNNHLNMLESE-IGNLIMLTCMDLSYNNLNKLPIGMGY--LVRLVTLNLSYNMIKE 214

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
            P D+  ++ LRILD+S N L+ +P     L    ++    NN+   P   G    +L  
Sbjct: 215 LPPDMTSMRSLRILDVSFNQLEVLP-PLGELRKAEKIMFQSNNLKKFPDISGC--SALTV 271

Query: 389 LRLDGNPLRSIRRTILDRG 407
           L LD N +  I    L+  
Sbjct: 272 LHLDNNNIPEIDSQCLETA 290


>gi|418744943|ref|ZP_13301288.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794274|gb|EKR92184.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 526

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 118/359 (32%), Positives = 174/359 (48%), Gaps = 18/359 (5%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ IG L  L  LDL  N+++++P  I    +L +  +  N L+ LP E+GKL  L  L
Sbjct: 161 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQEL 220

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            L  NQL     E  +L+ L  L L+NN L+ LP EIGK+  L  L L  N L TL   +
Sbjct: 221 HLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEI 280

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                   L    ++L         TT    I     L    +EL LE   L+ +P EI 
Sbjct: 281 GKLQNLQWLGLSNNQL---------TTLPKEIGKLQHL----QELHLENNQLTTLPKEIG 327

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           +   + +L L  N +  LP E+     L+ L  S N+    P+ I  +L +L  L L +N
Sbjct: 328 KLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIW-NLQNLQALNLYSN 386

Query: 277 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
            L  +P +      +  +      +A+LP+      L +LQ LYL   QL   P +I +L
Sbjct: 387 QLTSLPKEIGNLQNLQLLYLSDNQLATLPKE--IGKLQNLQLLYLSDNQLTTLPKEIGKL 444

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           Q L+ L L  N L ++P+  +NL SL  L LSDN +++ P E+G L+  L+  RL+  P
Sbjct: 445 QNLQELYLRDNQLTTLPKEIENLQSLEYLYLSDNPLTSFPEEIGKLQ-HLKWFRLENIP 502



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 128/376 (34%), Positives = 172/376 (45%), Gaps = 43/376 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+L  L    I     L +L  ++N L  +PE IG L  L  L L  N++ ++P 
Sbjct: 174 LDLSSNQLMTLPKE-IGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLPK 232

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    + NN L+ LP E+GKL KL  L L +NQL     E  +L+ L  L LS
Sbjct: 233 EIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLS 292

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN L+ LP EIGK+  L++L L  N L TL         P  +  L++      D    T
Sbjct: 293 NNQLTTLPKEIGKLQHLQELHLENNQLTTL---------PKEIGKLQNLQELRLDYNRLT 343

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
           T  + I    +L    K+L   G   + +P EIW    +  L+L  N +  LP E+ +  
Sbjct: 344 TLPEEIEKLQKL----KKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQ 399

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           +LQ L LS N++   P  I   L +L  L L +N L  +P    K+I  LQ         
Sbjct: 400 NLQLLYLSDNQLATLPKEI-GKLQNLQLLYLSDNQLTTLP----KEIGKLQ--------- 445

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
                       +LQELYLR  QL   P +I  LQ L  L LS N L S PE    L  L
Sbjct: 446 ------------NLQELYLRDNQLTTLPKEIENLQSLEYLYLSDNPLTSFPEEIGKLQHL 493

Query: 363 TELDLSDNNISALPPE 378
               L   NI  L P+
Sbjct: 494 KWFRLE--NIPTLLPQ 507



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/328 (34%), Positives = 160/328 (48%), Gaps = 43/328 (13%)

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           N+ L  LP E+GKL  L  LDL SNQL     E  +L+ L  L+L+ N L+ LP EIGK+
Sbjct: 155 NDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKL 214

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L++L LT N L TL         P  ++ L++                          
Sbjct: 215 QNLQELHLTDNQLTTL---------PKEIEKLQNL------------------------- 240

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             + L L    L+ +P EI +  ++  L L  N +  LP E+    +LQ L LS N++  
Sbjct: 241 --QWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTT 298

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
            P  I   L  L  L L+NN L  +P +  K +  LQ L L YN + +LPE      L  
Sbjct: 299 LPKEI-GKLQHLQELHLENNQLTTLPKEIGK-LQNLQELRLDYNRLTTLPEE--IEKLQK 354

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           L++LY    Q    P +I  LQ L+ L+L  N L S+P+   NL +L  L LSDN ++ L
Sbjct: 355 LKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATL 414

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P E+G L+ +LQ L L  N L ++ + I
Sbjct: 415 PKEIGKLQ-NLQLLYLSDNQLTTLPKEI 441


>gi|418712108|ref|ZP_13272853.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791375|gb|EKR85051.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 380

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 118/350 (33%), Positives = 169/350 (48%), Gaps = 43/350 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 54  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 113

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 114 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 167

Query: 170 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 168 SLNLSYNQIKTIPKEIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 219

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  +     K+
Sbjct: 220 NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTLS----KE 274

Query: 289 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
           I  LQ                     +L+ L LR  QL   P +I +L+ L++LDL  N 
Sbjct: 275 IEQLQ---------------------NLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQ 313

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L ++PEG   L +L  LDL  N ++ LP E+G L+ +LQ L L+ N L S
Sbjct: 314 LTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQ-NLQELFLNNNQLSS 362



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 157/327 (48%), Gaps = 24/327 (7%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+   L    I     L EL  +KN L  +P+ IG L  L +L+L  N+I +IP 
Sbjct: 54  LDLSANRFKTLPKE-IGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 112

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L   Y+ NN L+ LP E+G+L KL  L L  NQL     E  QL+ L  L+LS
Sbjct: 113 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 172

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N +  +P EI K+  L+ L L  N L TL   +              +L   +  + ST
Sbjct: 173 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI-------------GQLQNLQSLDLST 219

Query: 183 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
            +  L T+   +      ++L L    L+ +P+EI +   +  L+L  N +  L  E+  
Sbjct: 220 NR--LTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQ 277

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             +L++L L  N++  +P  I   L +L  L L +N L  +P +G   +  LQ LDL  N
Sbjct: 278 LQNLKSLDLRSNQLTIFPKEI-GQLKNLQVLDLGSNQLTTLP-EGIGQLKNLQTLDLDSN 335

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQL 326
            + +LP+      L +LQEL+L   QL
Sbjct: 336 QLTTLPQ--EIGQLQNLQELFLNNNQL 360



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 143/288 (49%), Gaps = 21/288 (7%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RL 172
           L++  LDLS N    LP EIGK+  L++L L  N L  L   +        LK LR   L
Sbjct: 49  LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEI------GQLKNLRKLNL 102

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
             N+        E L  + +        L L    L+ +P EI +  ++  L L +N + 
Sbjct: 103 SANQIKTIPKEIEKLQKLQS--------LYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT 154

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            LP E+    +L++L LS N+IK  P  I   L  L  L LDNN L  +P +    +  L
Sbjct: 155 TLPQEIGQLKNLKSLNLSYNQIKTIPKEI-EKLQKLQSLGLDNNQLTTLPQE-IGQLQNL 212

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           Q LDLS N + +LP+      L +LQ+LYL   QL   P +I +L+ L+ L+L  N L +
Sbjct: 213 QSLDLSTNRLTTLPQ--EIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTT 270

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           + +  + L +L  LDL  N ++  P E+G L+ +LQ L L  N L ++
Sbjct: 271 LSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLK-NLQVLDLGSNQLTTL 317



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 114/222 (51%), Gaps = 7/222 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+ E   T  DL T A +  +  + L L       +P EI +   + +L+L++N +  LP
Sbjct: 30  EEFEQQETYTDL-TKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILP 88

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +L+ L LS N+IK  P  I   L  L  L L NN L  +P +    +  LQ L
Sbjct: 89  KEIGQLKNLRKLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWL 146

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L  N + +LP+      L +L+ L L   Q++  P +I +LQ+L+ L L  N L ++P+
Sbjct: 147 YLPKNQLTTLPQ--EIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQ 204

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
               L +L  LDLS N ++ LP E+G L+ +LQ L L  N L
Sbjct: 205 EIGQLQNLQSLDLSTNRLTTLPQEIGHLQ-NLQDLYLVSNQL 245



 Score = 46.2 bits (108), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 1/83 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT+     I     L  L    N L  +PE IG L  L  LDL  N++ +
Sbjct: 281 LKSLDLRSNQLTIFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTT 339

Query: 61  IPSSISGCCSLAEFYMGNNALSA 83
           +P  I    +L E ++ NN LS+
Sbjct: 340 LPQEIGQLQNLQELFLNNNQLSS 362


>gi|156550592|ref|XP_001603998.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Nasonia
           vitripennis]
          Length = 582

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 180/394 (45%), Gaps = 47/394 (11%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
           RLDL ++ I ++P+S+     L EFY+  N L  LP E+G L+ L TL L  N L     
Sbjct: 105 RLDLSKSSITNLPNSVRDLTHLVEFYLYGNKLVTLPPEIGCLANLKTLALSENSLTSLPD 164

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
               L+ L VLDL +N L+ +P  + K+T+L  L L  N +R +  ++ N     +L   
Sbjct: 165 TLENLKQLKVLDLRHNKLNEIPDVVYKLTSLTTLFLRFNRVRYVSDNIRNLTNLTMLS-- 222

Query: 169 RSRLPENEDSEASTTKEDLITMATRLSVTSKE----------------LSLEGMNLSAIP 212
              L EN+  E       L  + T   V+                   L L+   L  IP
Sbjct: 223 ---LRENKIKELPAGIGKLTNLVT-FDVSHNHLEHLPAEIGNCDQLSTLDLQHNELLDIP 278

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
             I     +T+L L  N +  +P  L++C  +    +  N++   PD +L+SLS+L  + 
Sbjct: 279 ETIGNLVSVTRLGLRYNRLSSIPKSLANCKLMDEFSVEGNQVSQLPDGLLSSLSNLKTIT 338

Query: 273 LDNNPLRQVPSDG---FKDIPML-----QILDLSYNIASLPEN--------PPFSSLP-- 314
           L  N     PS G   F ++  +     +I  + Y I S  +N           ++LP  
Sbjct: 339 LSRNAFTAYPSGGPSQFTNVYSINLEHNKIDKIPYGIFSRAKNLTKLNMKENQLTALPLD 398

Query: 315 -----HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
                ++ EL L   QL + P DI  LQ L IL LS N L+ IP    +L+ L  LDL +
Sbjct: 399 TGTWINMVELNLGTNQLVKIPDDIQYLQNLEILILSNNLLKRIPASIASLSKLRVLDLEE 458

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           N I +LP E+G L   LQ L L  N + S+ R I
Sbjct: 459 NKIESLPNEIGFLR-DLQKLILQSNQVTSLPRAI 491



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 200/425 (47%), Gaps = 29/425 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  NKL  + + ++   T LT L    N +  + + I +L+ L  L L +N+I  +P+
Sbjct: 175 LDLRHNKLNEIPD-VVYKLTSLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIKELPA 233

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I    +L  F + +N L  LPAE+G   +L TLDL  N+L +       L  ++ L L 
Sbjct: 234 GIGKLTNLVTFDVSHNHLEHLPAEIGNCDQLSTLDLQHNELLDIPETIGNLVSVTRLGLR 293

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRT----LRSSLVNGPTPALLKYLRSRLPENEDS 178
            N LS +P  +     + +  + GN +      L SSL N  T  L +   +  P    S
Sbjct: 294 YNRLSSIPKSLANCKLMDEFSVEGNQVSQLPDGLLSSLSNLKTITLSRNAFTAYPSGGPS 353

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPE 237
           + +                   ++LE   +  IP  I+  A  +TKL++  N +  LP +
Sbjct: 354 QFTNV---------------YSINLEHNKIDKIPYGIFSRAKNLTKLNMKENQLTALPLD 398

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
             +  ++  L L  N++   PD I   L +L  L L NN L+++P+     +  L++LDL
Sbjct: 399 TGTWINMVELNLGTNQLVKIPDDI-QYLQNLEILILSNNLLKRIPA-SIASLSKLRVLDL 456

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
             N I SLP    F  L  LQ+L L+  Q+   P  I  L  L  L + +N+L  +PE  
Sbjct: 457 EENKIESLPNEIGF--LRDLQKLILQSNQVTSLPRAIGHLTNLTHLSVGENNLNYLPEEI 514

Query: 357 KNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
             L +L  L ++DN N+  LP EL L   +L  + ++  PL  I   I+  G   V+++L
Sbjct: 515 GTLENLDCLYINDNANLHNLPFELALCT-NLSIMSIENCPLSQIPPEIVAGGPSLVIQFL 573

Query: 416 KDKIP 420
           K + P
Sbjct: 574 KMQGP 578



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 27/205 (13%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           K L L   +++ +P+ + +   + +  L  N +  LPPE+   A+L+TL LS N +   P
Sbjct: 104 KRLDLSKSSITNLPNSVRDLTHLVEFYLYGNKLVTLPPEIGCLANLKTLALSENSLTSLP 163

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 318
           D  L +L  L  L L +N L ++P             D+ Y + S            L  
Sbjct: 164 DT-LENLKQLKVLDLRHNKLNEIP-------------DVVYKLTS------------LTT 197

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L+LR  ++R    +I  L  L +L L +N ++ +P G   LT+L   D+S N++  LP E
Sbjct: 198 LFLRFNRVRYVSDNIRNLTNLTMLSLRENKIKELPAGIGKLTNLVTFDVSHNHLEHLPAE 257

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTI 403
           +G  +  L  L L  N L  I  TI
Sbjct: 258 IGNCD-QLSTLDLQHNELLDIPETI 281



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 41/298 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS-LSRLIRLDLHQNRIL 59
           M +  VEGN+++ L + L++S + L  +  S+N     P    S  + +  ++L  N+I 
Sbjct: 310 MDEFSVEGNQVSQLPDGLLSSLSNLKTITLSRNAFTAYPSGGPSQFTNVYSINLEHNKID 369

Query: 60  SIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 117
            IP  I S   +L +  M  N L+ALP + G    +  L+L +NQL +   +   L+ L 
Sbjct: 370 KIPYGIFSRAKNLTKLNMKENQLTALPLDTGTWINMVELNLGTNQLVKIPDDIQYLQNLE 429

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
           +L LSNN L  +P  I  ++ LR L L  N + +L         P  + +LR        
Sbjct: 430 ILILSNNLLKRIPASIASLSKLRVLDLEENKIESL---------PNEIGFLR-------- 472

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                   DL           ++L L+   ++++P  I     +T L +  N++  LP E
Sbjct: 473 --------DL-----------QKLILQSNQVTSLPRAIGHLTNLTHLSVGENNLNYLPEE 513

Query: 238 LSSCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           + +  +L  L ++ N  + + P   L   ++LS + ++N PL Q+P +     P L I
Sbjct: 514 IGTLENLDCLYINDNANLHNLPFE-LALCTNLSIMSIENCPLSQIPPEIVAGGPSLVI 570


>gi|456823237|gb|EMF71707.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 391

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 118/350 (33%), Positives = 169/350 (48%), Gaps = 43/350 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 166

Query: 170 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 167 SLNLSYNQIKTIPKEIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 218

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  +     K+
Sbjct: 219 NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTLS----KE 273

Query: 289 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
           I  LQ                     +L+ L LR  QL   P +I +L+ L++LDL  N 
Sbjct: 274 IEQLQ---------------------NLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQ 312

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L ++PEG   L +L  LDL  N ++ LP E+G L+ +LQ L L+ N L S
Sbjct: 313 LTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQ-NLQELFLNNNQLSS 361



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 157/327 (48%), Gaps = 24/327 (7%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+   L    I     L EL  +KN L  +P+ IG L  L +L+L  N+I +IP 
Sbjct: 53  LDLSANRFKTLPKE-IGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L   Y+ NN L+ LP E+G+L KL  L L  NQL     E  QL+ L  L+LS
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N +  +P EI K+  L+ L L  N L TL   +              +L   +  + ST
Sbjct: 172 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI-------------GQLQNLQSLDLST 218

Query: 183 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
            +  L T+   +      ++L L    L+ +P+EI +   +  L+L  N +  L  E+  
Sbjct: 219 NR--LTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQ 276

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             +L++L L  N++  +P  I   L +L  L L +N L  +P +G   +  LQ LDL  N
Sbjct: 277 LQNLKSLDLRSNQLTIFPKEI-GQLKNLQVLDLGSNQLTTLP-EGIGQLKNLQTLDLDSN 334

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQL 326
            + +LP+      L +LQEL+L   QL
Sbjct: 335 QLTTLPQ--EIGQLQNLQELFLNNNQL 359



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 143/288 (49%), Gaps = 21/288 (7%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RL 172
           L++  LDLS N    LP EIGK+  L++L L  N L  L   +        LK LR   L
Sbjct: 48  LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEI------GQLKNLRKLNL 101

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
             N+        E L  + +        L L    L+ +P EI +  ++  L L +N + 
Sbjct: 102 SANQIKTIPKEIEKLQKLQS--------LYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT 153

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            LP E+    +L++L LS N+IK  P  I   L  L  L LDNN L  +P +    +  L
Sbjct: 154 TLPQEIGQLKNLKSLNLSYNQIKTIPKEI-EKLQKLQSLGLDNNQLTTLPQE-IGQLQNL 211

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           Q LDLS N + +LP+      L +LQ+LYL   QL   P +I +L+ L+ L+L  N L +
Sbjct: 212 QSLDLSTNRLTTLPQ--EIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTT 269

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           + +  + L +L  LDL  N ++  P E+G L+ +LQ L L  N L ++
Sbjct: 270 LSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLK-NLQVLDLGSNQLTTL 316



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 114/225 (50%), Gaps = 14/225 (6%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+SE+ T  +    +   L V  + L L       +P EI +   + +L+L++N +  LP
Sbjct: 30  EESESGTYTDLAKALQNPLKV--RTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +L+ L LS N+IK  P  I   L  L  L L NN L  +P    ++I  LQ L
Sbjct: 88  KEIGQLKNLRKLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLP----QEIGQLQKL 142

Query: 296 DLSY----NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
              Y     + +LP+      L +L+ L L   Q++  P +I +LQ+L+ L L  N L +
Sbjct: 143 QWLYLPKNQLTTLPQ--EIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTT 200

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           +P+    L +L  LDLS N ++ LP E+G L+ +LQ L L  N L
Sbjct: 201 LPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ-NLQDLYLVSNQL 244



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 1/83 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT+     I     L  L    N L  +PE IG L  L  LDL  N++ +
Sbjct: 280 LKSLDLRSNQLTIFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTT 338

Query: 61  IPSSISGCCSLAEFYMGNNALSA 83
           +P  I    +L E ++ NN LS+
Sbjct: 339 LPQEIGQLQNLQELFLNNNQLSS 361



 Score = 42.7 bits (99), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 1/66 (1%)

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
           ++R LDLS N  +++P+    L +L EL+L+ N ++ LP E+G L+ +L+ L L  N ++
Sbjct: 49  KVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLK-NLRKLNLSANQIK 107

Query: 398 SIRRTI 403
           +I + I
Sbjct: 108 TIPKEI 113


>gi|350422758|ref|XP_003493273.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Bombus
           impatiens]
          Length = 610

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 177/393 (45%), Gaps = 45/393 (11%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
           RLDL ++ I  +PS++     L EFY+  N L  LP E+G L  L TL L  N L     
Sbjct: 133 RLDLSKSNITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLGNLETLALSENSLTSLPN 192

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
               L+ L VLDL +N LS +P  + K+T L  L L  N +R +  ++ N     +L   
Sbjct: 193 TLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTMLS-- 250

Query: 169 RSRLPENEDSEASTTKEDLITMAT------RLSVTSKE---------LSLEGMNLSAIPS 213
              L EN+  E       L+ + T       L    +E         L L+   L  IP 
Sbjct: 251 ---LRENKIRELPAGIGKLVNLITFDISHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPD 307

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
            I     +T+L L  N +  +P  L++C  +    +  N++   PD +L SLS L+ + L
Sbjct: 308 TIGRLVSLTRLGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITL 367

Query: 274 DNNPLRQVPSDG---FKDIPML-----QILDLSYNIASLPEN--------PPFSSLP--- 314
             N     PS G   F ++  +     +I  + Y I S  +N           ++LP   
Sbjct: 368 SRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYAIFSRAKNLAKLNMKENQLTALPLDI 427

Query: 315 ----HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
               ++ EL L   QL + P DI  LQ L +L LS N L+ IP    NL  L  LDL +N
Sbjct: 428 GTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEEN 487

Query: 371 NISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            I +LP E+G L   LQ L L  N + S+ R I
Sbjct: 488 KIESLPNEIGFLR-DLQKLILQSNQVTSLPRAI 519



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 206/429 (48%), Gaps = 24/429 (5%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N LT L N L  +   L  L    N L+ +P+ +  L+ L  L L  NR+  +  +I   
Sbjct: 185 NSLTSLPNTL-ENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSDNIRNL 243

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLS 127
            +L    +  N +  LPA +GKL  L T D+  N L+    E    ++LS LDL +N L 
Sbjct: 244 TNLTMLSLRENKIRELPAGIGKLVNLITFDISHNHLEHLPEEIGNCVQLSTLDLQHNELL 303

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            +P  IG++ +L +L L  N L ++  SL N           +++ +  D   ++   DL
Sbjct: 304 DIPDTIGRLVSLTRLGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLS-DL 362

Query: 188 ITMA-TRLSVTS------------KELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQE 233
            T+  +R + T+              ++LE   +  IP  I+  A  + KL++  N +  
Sbjct: 363 TTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYAIFSRAKNLAKLNMKENQLTA 422

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP ++ +  ++  L L  N++   PD I   L +L  L L NN L+++P+    ++  L+
Sbjct: 423 LPLDIGTWVNMVELNLGTNQLTKIPDDI-QCLQNLEVLILSNNLLKRIPA-SIANLRKLR 480

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
           +LDL  N I SLP    F  L  LQ+L L+  Q+   P  I  L  L  L + +N+L  +
Sbjct: 481 VLDLEENKIESLPNEIGF--LRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYL 538

Query: 353 PEGFKNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAV 411
           PE    L +L  L ++DN N+  LP EL L   +L  + ++  PL  I   I+  G   V
Sbjct: 539 PEEIGTLENLDSLYVNDNANLHNLPFELALC-TNLSIMSIENCPLSHIPPEIVAGGPSLV 597

Query: 412 LKYLKDKIP 420
           +++LK + P
Sbjct: 598 IQFLKMQGP 606



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 13/217 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E NK+  +   + +    L +L   +N L  +P  IG+   ++ L+L  N++  IP 
Sbjct: 389 INLEHNKIDKIPYAIFSRAKNLAKLNMKENQLTALPLDIGTWVNMVELNLGTNQLTKIPD 448

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    + NN L  +PA +  L KL  LDL  N+++    E   LR L  L L 
Sbjct: 449 DIQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEENKIESLPNEIGFLRDLQKLILQ 508

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N ++ LP  IG +T L  L +  N L  L   +        L+ L S L  N+++    
Sbjct: 509 SNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEI------GTLENLDS-LYVNDNANLHN 561

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 219
              +L  + T LS+    +S+E   LS IP EI   G
Sbjct: 562 LPFEL-ALCTNLSI----MSIENCPLSHIPPEIVAGG 593


>gi|340712839|ref|XP_003394961.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Bombus
           terrestris]
          Length = 610

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 176/394 (44%), Gaps = 47/394 (11%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
           RLDL ++ I  +PS++     L EFY+  N L  LP E+G L  L TL L  N L     
Sbjct: 133 RLDLSKSNITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLGNLETLALSENSLTSLPN 192

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
               L+ L VLDL +N LS +P  + K+T L  L L  N +R +  ++ N     +L   
Sbjct: 193 TLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTMLS-- 250

Query: 169 RSRLPENEDSEASTTKEDLITMATRLSVTSKEL----------------SLEGMNLSAIP 212
              L EN+  E       L+ + T   V+   L                 L+   L  IP
Sbjct: 251 ---LRENKIRELPAGIGKLVNLIT-FDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIP 306

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
             I     +T+L L  N +  +P  L++C  +    +  N++   PD +L SLS L+ + 
Sbjct: 307 DTIGRLVLLTRLGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTIT 366

Query: 273 LDNNPLRQVPSDG---FKDIPML-----QILDLSYNIASLPEN--------PPFSSLP-- 314
           L  N     PS G   F ++  +     +I  + Y I S  +N           ++LP  
Sbjct: 367 LSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQLTALPLD 426

Query: 315 -----HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
                ++ EL L   QL + P DI  LQ L +L LS N L+ IP    NL  L  LDL +
Sbjct: 427 IGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEE 486

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           N I +LP E+G L   LQ L L  N + S+ R I
Sbjct: 487 NKIESLPNEIGFLR-DLQKLILQSNQVTSLPRAI 519



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 205/429 (47%), Gaps = 24/429 (5%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N LT L N L  +   L  L    N L+ +P+ +  L+ L  L L  NR+  +  +I   
Sbjct: 185 NSLTSLPNTL-ENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSDNIRNL 243

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLS 127
            +L    +  N +  LPA +GKL  L T D+  N L+    E    ++LS LDL +N L 
Sbjct: 244 TNLTMLSLRENKIRELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELL 303

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            +P  IG++  L +L L  N L ++  SL N           +++ +  D   ++   DL
Sbjct: 304 DIPDTIGRLVLLTRLGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLS-DL 362

Query: 188 ITMA-TRLSVTS------------KELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQE 233
            T+  +R + T+              ++LE   +  IP  I+  A  + KL++  N +  
Sbjct: 363 TTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQLTA 422

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP ++ +  ++  L L  N++   PD I   L +L  L L NN L+++P+    ++  L+
Sbjct: 423 LPLDIGTWVNMVELNLGTNQLTKIPDDI-QCLQNLEVLILSNNLLKRIPA-SIANLRKLR 480

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
           +LDL  N I SLP    F  L  LQ+L L+  Q+   P  I  L  L  L + +N+L  +
Sbjct: 481 VLDLEENKIESLPNEIGF--LRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYL 538

Query: 353 PEGFKNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAV 411
           PE    L +L  L ++DN N+  LP EL L   +L  + ++  PL  I   I+  G   V
Sbjct: 539 PEEIGTLENLDSLYVNDNANLHNLPFELALC-TNLSIMSIENCPLSQIPPEIVAGGPSLV 597

Query: 412 LKYLKDKIP 420
           +++LK + P
Sbjct: 598 IQFLKMQGP 606



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 13/217 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E NK+  +   + +    L +L   +N L  +P  IG+   ++ L+L  N++  IP 
Sbjct: 389 INLEHNKIDKIPYGIFSRAKNLAKLNMKENQLTALPLDIGTWVNMVELNLGTNQLTKIPD 448

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    + NN L  +PA +  L KL  LDL  N+++    E   LR L  L L 
Sbjct: 449 DIQCLQNLEVLILSNNLLKRIPASIANLRKLRVLDLEENKIESLPNEIGFLRDLQKLILQ 508

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N ++ LP  IG +T L  L +  N L  L   +        L+ L S L  N+++    
Sbjct: 509 SNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEI------GTLENLDS-LYVNDNANLHN 561

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 219
              +L  + T LS+    +S+E   LS IP EI   G
Sbjct: 562 LPFEL-ALCTNLSI----MSIENCPLSQIPPEIVAGG 593


>gi|429962035|gb|ELA41579.1| hypothetical protein VICG_01443 [Vittaforma corneae ATCC 50505]
          Length = 462

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 190/410 (46%), Gaps = 48/410 (11%)

Query: 16  NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 75
           +++I     L  L  S+  L  +P  IG L  L  L L+ N   ++   I    +L    
Sbjct: 72  HDVIEELKYLCCLDLSRKELRSLPPEIGELESLDGLYLNGNEFETLSPVIGELKNLKYLD 131

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 134
           + +N L  L  E+G+L  L  LDL  N+L+    E  +L  L +L L++N L  LPPEIG
Sbjct: 132 LYDNKLERLSPEIGRLKNLRELDLSGNKLRTLPSEIGELVNLGILHLNDNKLERLPPEIG 191

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
           ++  L +L L GN L  L         P  ++ L+ RL                      
Sbjct: 192 RLKDLWRLYLNGNNLEAL---------PETIENLKDRL---------------------- 220

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
                 L L G  L  +P EI E   +  L L+ N ++ LPPE+    +L+ L L+ N +
Sbjct: 221 ----WYLYLNGNKLKTLPPEIGELVNLGILHLNDNKLERLPPEIGRLKNLRELGLNGNNL 276

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 313
           +  P+ I   L  L  L L+ N L+ +P +   ++  L +L L+ N +  LP  P    L
Sbjct: 277 EALPETI-RELKKLQYLYLNGNKLKTLPPE-IGELKWLLVLHLNGNKLERLP--PEIGEL 332

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
             L  LYL   +    P++I +L+ LR L LS N L+ +P     L +L ELDLS N + 
Sbjct: 333 EGLYTLYLNDNEFETLPSEIGKLKNLRHLHLSGNKLERLPYVIAELKNLRELDLSGNKLE 392

Query: 374 ALPPEL-GLLEPSLQALRLDGNPLRSI---RRTILDRGTKAVLKYLKDKI 419
            LP  +  +L  SLQ L L GN +  +   +RT+   G K + +   D++
Sbjct: 393 TLPSYIVRMLSGSLQLLDLRGNNIYEVGDGKRTL---GKKELREIFGDRV 439



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 159/376 (42%), Gaps = 67/376 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L + GN+   LS  +I     L  L    N L  +   IG L  L  LDL  N++ +
Sbjct: 104 LDGLYLNGNEFETLSP-VIGELKNLKYLDLYDNKLERLSPEIGRLKNLRELDLSGNKLRT 162

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSV 118
           +PS I    +L   ++ +N L  LP E+G+L  L  L L+ N L+     +E  + RL  
Sbjct: 163 LPSEIGELVNLGILHLNDNKLERLPPEIGRLKDLWRLYLNGNNLEALPETIENLKDRLWY 222

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           L L+ N L  LPPEIG++  L  L L  N L  L       P    LK LR         
Sbjct: 223 LYLNGNKLKTLPPEIGELVNLGILHLNDNKLERLP------PEIGRLKNLR--------- 267

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                                EL L G NL A+P  I E  ++  L L+ N ++ LPPE+
Sbjct: 268 ---------------------ELGLNGNNLEALPETIRELKKLQYLYLNGNKLKTLPPEI 306

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
                L  L L+ NK++  P  I   L  L  L L++N    +PS+              
Sbjct: 307 GELKWLLVLHLNGNKLERLPPEI-GELEGLYTLYLNDNEFETLPSE-------------- 351

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
                         L +L+ L+L   +L   P  I  L+ LR LDLS N L+++P     
Sbjct: 352 -----------IGKLKNLRHLHLSGNKLERLPYVIAELKNLRELDLSGNKLETLPSYIVR 400

Query: 359 L--TSLTELDLSDNNI 372
           +   SL  LDL  NNI
Sbjct: 401 MLSGSLQLLDLRGNNI 416



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 118/290 (40%), Gaps = 48/290 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L + GN L  L   +      L  L  + N L  +P  IG L  L  L L+ N++  
Sbjct: 196 LWRLYLNGNNLEALPETIENLKDRLWYLYLNGNKLKTLPPEIGELVNLGILHLNDNKLER 255

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  +  N L ALP  + +L KL  L L+ N+LK    E  +L+ L VL
Sbjct: 256 LPPEIGRLKNLRELGLNGNNLEALPETIRELKKLQYLYLNGNKLKTLPPEIGELKWLLVL 315

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L+ N L  LPPEIG++  L  L L  N   TL S +        LK LR          
Sbjct: 316 HLNGNKLERLPPEIGELEGLYTLYLNDNEFETLPSEI------GKLKNLR---------- 359

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                L L G  L  +P  I E   + +LDLS N ++ LP  + 
Sbjct: 360 --------------------HLHLSGNKLERLPYVIAELKNLRELDLSGNKLETLPSYIV 399

Query: 240 S--CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
                SLQ L L  N I +  D   T         L    LR++  D  K
Sbjct: 400 RMLSGSLQLLDLRGNNIYEVGDGKRT---------LGKKELREIFGDRVK 440



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 26/193 (13%)

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
           N++++   I E   +  LDLSR  ++ LPPE+    SL  L L+ N+ +     ++  L 
Sbjct: 67  NITSLHDVIEELKYLCCLDLSRKELRSLPPEIGELESLDGLYLNGNEFETL-SPVIGELK 125

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
           +L  L L +N L ++                         +P    L +L+EL L   +L
Sbjct: 126 NLKYLDLYDNKLERL-------------------------SPEIGRLKNLRELDLSGNKL 160

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
           R  P++I  L  L IL L+ N L+ +P     L  L  L L+ NN+ ALP  +  L+  L
Sbjct: 161 RTLPSEIGELVNLGILHLNDNKLERLPPEIGRLKDLWRLYLNGNNLEALPETIENLKDRL 220

Query: 387 QALRLDGNPLRSI 399
             L L+GN L+++
Sbjct: 221 WYLYLNGNKLKTL 233


>gi|291240350|ref|XP_002740092.1| PREDICTED: PDZ-domain protein scribble-like [Saccoglossus
           kowalevskii]
          Length = 1630

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 195/412 (47%), Gaps = 44/412 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ NKLT L  + I     L E+  S N +   PE+IG L  L  L+   N++  +P 
Sbjct: 237 LHIDRNKLTNLPID-IGKLKNLQEINMSMNKILDFPESIGGLVNLQFLNAKNNQLKCLPV 295

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK-------------EYCVE 110
           S      L E  + NN + +LP  +GKL  L  LD+  N L+             ++ + 
Sbjct: 296 SFVNLSKLREVNVSNNYIESLPRSIGKLKDLKYLDISHNHLESLPPSIGECILVSKHVIT 355

Query: 111 ACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
             ++   L+ L +  N +  LP EIG +++L  L++  NP+R     + N     L KY 
Sbjct: 356 CWKMLRELTSLKMMRNQIKVLPREIGYLSSLSTLVIDDNPIREPPMVICNEGILGLQKYW 415

Query: 169 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
           + +     D E          +   +   S+++SL+  +L+ IP  I +   I +LDLSR
Sbjct: 416 QKK-----DQE----------LLKNVKPNSEKVSLKQNDLTYIPKSISQYTHIQQLDLSR 460

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +  LP E+     L+ L +S N + D P     S S L  L L  N L + P D  ++
Sbjct: 461 NKLSYLPLEMCQLTQLENLDISNNNLIDLPG----SFSDLKILNLSRNNLTEFP-DNLEN 515

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           I   Q +D+S N + ++      S L H+    +R  +L+  P  +    +L  L+LS N
Sbjct: 516 I---QQIDISQNCLQNIHIGMNLSKLTHVN---MRDTKLKNFPLQLCSASELYHLNLSCN 569

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           +++ IP G  NL  L  +D+ +N I ++P E+G +   L+ L +  N + +I
Sbjct: 570 NIEEIPPGICNLQRLAIIDVCENKIRSIPKEIGNMN-RLKELHISNNKIGNI 620



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 206/449 (45%), Gaps = 62/449 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L++ GN++       I+    L +L  S N +  +P TI +L  L  LDLH N + +
Sbjct: 95  LTVLNMNGNEIIGKLQPDISKLVNLQKLDLSVNNIEEIPRTILNLCALQELDLHYNMLST 154

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  +     L +  +  N L+ LP  LG L +L +L +  N+L    +E   L  L  L
Sbjct: 155 IPCEVGQLVHLTDLNLSQNQLTELPITLGNLKRLQSLRVSDNKLLSVSMEIGMLVELRTL 214

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL--------VNGPTPALLKYLRS- 170
           DLS N +  +P  IGK+ +L+ L +  N L  L   +        +N     +L +  S 
Sbjct: 215 DLSKNEIVEIPSSIGKLKSLKMLHIDRNKLTNLPIDIGKLKNLQEINMSMNKILDFPESI 274

Query: 171 ------RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
                 +    ++++        + ++       +E+++    + ++P  I +  ++  L
Sbjct: 275 GGLVNLQFLNAKNNQLKCLPVSFVNLSKL-----REVNVSNNYIESLPRSIGKLKDLKYL 329

Query: 225 DLSRNSIQELPPELSSCA--------------SLQTLILSRNKIKDWPDAILTSLSSLSC 270
           D+S N ++ LPP +  C                L +L + RN+IK  P  I   LSSLS 
Sbjct: 330 DISHNHLESLPPSIGECILVSKHVITCWKMLRELTSLKMMRNQIKVLPREI-GYLSSLST 388

Query: 271 LKLDNNPLRQVP----SDGF---------KDIPMLQILDLSYNIASLPEN------PPFS 311
           L +D+NP+R+ P    ++G          KD  +L+ +  +    SL +N         S
Sbjct: 389 LVIDDNPIREPPMVICNEGILGLQKYWQKKDQELLKNVKPNSEKVSLKQNDLTYIPKSIS 448

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
              H+Q+L L R +L   P ++ +L QL  LD+S N+L  +P  F +L     L+LS NN
Sbjct: 449 QYTHIQQLDLSRNKLSYLPLEMCQLTQLENLDISNNNLIDLPGSFSDLKI---LNLSRNN 505

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSIR 400
           ++  P  L     ++Q + +  N L++I 
Sbjct: 506 LTEFPDNL----ENIQQIDISQNCLQNIH 530



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 187/422 (44%), Gaps = 62/422 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM-G 77
           IA +     L    N  + +P  I  L +L  L+L +N I +IP S+    +L    M G
Sbjct: 43  IAEYKDCERLNLRCNSFSTLPPEISHLKKLNELNLSENCIENIPMSLYKLTALTVLNMNG 102

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEY---CVEACQLRLSVLDLSNNSLSGLPPEIG 134
           N  +  L  ++ KL  L  LDL  N ++E     +  C L+   LDL  N LS +P E+G
Sbjct: 103 NEIIGKLQPDISKLVNLQKLDLSVNNIEEIPRTILNLCALQ--ELDLHYNMLSTIPCEVG 160

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATR 193
           ++  L  L L+ N L  L  +L N      LK L+S R+ +N        K   ++M   
Sbjct: 161 QLVHLTDLNLSQNQLTELPITLGN------LKRLQSLRVSDN--------KLLSVSMEIG 206

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           + V  + L L    +  IPS I +   +  L + RN +  LP ++    +LQ + +S NK
Sbjct: 207 MLVELRTLDLSKNEIVEIPSSIGKLKSLKMLHIDRNKLTNLPIDIGKLKNLQEINMSMNK 266

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 313
           I D+P++I   L +L  L   NN L+ +P                           F +L
Sbjct: 267 ILDFPESI-GGLVNLQFLNAKNNQLKCLPVS-------------------------FVNL 300

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG--------------FKNL 359
             L+E+ +    +   P  I +L+ L+ LD+S N L+S+P                +K L
Sbjct: 301 SKLREVNVSNNYIESLPRSIGKLKDLKYLDISHNHLESLPPSIGECILVSKHVITCWKML 360

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
             LT L +  N I  LP E+G L  SL  L +D NP+R     I + G   + KY + K 
Sbjct: 361 RELTSLKMMRNQIKVLPREIGYLS-SLSTLVIDDNPIREPPMVICNEGILGLQKYWQKKD 419

Query: 420 PE 421
            E
Sbjct: 420 QE 421



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 199/426 (46%), Gaps = 66/426 (15%)

Query: 31   SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
            S N+ N  P  I  L++L++L L  N + SIPS+I    SL E  +  N ++ LPAEL +
Sbjct: 659  SGNVFNEFPPAISKLTKLVKLYLSGNNMTSIPSTIGRLKSLEEMSIDGNIITELPAELLE 718

Query: 91   LSKLGTLDLHSNQ----LKEYCVEACQLRLSVLDLSNNSLSGLPPEI-GKMTTLRKLLLT 145
            L ++  L L  NQ    LK++  E  +L+       N S   + P I  + + L  + +T
Sbjct: 719  L-QIIKLQLIENQQDTPLKDFVAELSRLK------QNGSTVAISPRIINRNSKLNSICVT 771

Query: 146  GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 205
            G  ++T  SS             ++   + +++      E  I    RL   + ++    
Sbjct: 772  G--IKTGVSST---------DVCKNVCMKGQNAIKKMWDELDIETLRRLEEDTSDIDFAN 820

Query: 206  MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 265
             +L  +P  I    E+ KL+L  N +  LP E+S+  SL++L L+ N  +++P ++L+ L
Sbjct: 821  RDLQKLPGVIGRFAELKKLNLKSNHLDTLPEEVSNLTSLESLNLADNSFENYP-SVLSHL 879

Query: 266  SSLSCLKLDNNPLRQ--------------------VPSDGFK----------------DI 289
             +L  L L++N L                      +P+   +                D+
Sbjct: 880  ENLVTLNLNHNKLTAMHISLVNIKELDASHNNLVAIPNTVSQASQLTNKINDDPSITLDL 939

Query: 290  PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
              L++L L++N   L   P   SL  L  L +   +L++ P  I  L+ L+ L LS N +
Sbjct: 940  KSLKVLRLTHN--KLTSIPSVDSLLELTVLDISDNKLQKIPKQIRILKNLKELYLSNNEI 997

Query: 350  QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTK 409
            +++P    +LT L ELD+S+N +  LPPE+  +  +LQ+L +  N L  + RTI+     
Sbjct: 998  KTVPCEITHLTELHELDISNNELEHLPPEIDNM-TNLQSLYIQRNRLMELPRTIVHIDN- 1055

Query: 410  AVLKYL 415
              LKY+
Sbjct: 1056 --LKYI 1059



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 208/454 (45%), Gaps = 81/454 (17%)

Query: 19   IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
            + S + L  L  S N +  +P  I +L RL  +D+ +N+I SIP  I     L E ++ N
Sbjct: 555  LCSASELYHLNLSCNNIEEIPPGICNLQRLAIIDVCENKIRSIPKEIGNMNRLKELHISN 614

Query: 79   NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
            N +  +P  L KL +L  LD+ +N LKE   +  +L  L +L LS N  +  PP I K+T
Sbjct: 615  NKIGNIPEPLCKLRELTLLDIRNNNLKELPPQFGELHELQILQLSGNVFNEFPPAISKLT 674

Query: 138  TLRKLLLTGNPLRTLRSSL----------VNG------PTPAL-LKYLRSRLPENED--- 177
             L KL L+GN + ++ S++          ++G      P   L L+ ++ +L EN+    
Sbjct: 675  KLVKLYLSGNNMTSIPSTIGRLKSLEEMSIDGNIITELPAELLELQIIKLQLIENQQDTP 734

Query: 178  -----SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS------------------- 213
                 +E S  K++  T+A    + ++   L  + ++ I +                   
Sbjct: 735  LKDFVAELSRLKQNGSTVAISPRIINRNSKLNSICVTGIKTGVSSTDVCKNVCMKGQNAI 794

Query: 214  -EIWEAGEI----------TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 262
             ++W+  +I          + +D +   +Q+LP  +   A L+ L L  N +   P+ + 
Sbjct: 795  KKMWDELDIETLRRLEEDTSDIDFANRDLQKLPGVIGRFAELKKLNLKSNHLDTLPEEV- 853

Query: 263  TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLR 322
            ++L+SL  L L +N     PS     +  L  L+L++N  +        SL +++EL   
Sbjct: 854  SNLTSLESLNLADNSFENYPS-VLSHLENLVTLNLNHNKLT----AMHISLVNIKELDAS 908

Query: 323  RMQLREAPTDI-----------------LRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
               L   P  +                 L L+ L++L L+ N L SIP    +L  LT L
Sbjct: 909  HNNLVAIPNTVSQASQLTNKINDDPSITLDLKSLKVLRLTHNKLTSIP-SVDSLLELTVL 967

Query: 366  DLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            D+SDN +  +P ++ +L+ +L+ L L  N ++++
Sbjct: 968  DISDNKLQKIPKQIRILK-NLKELYLSNNEIKTV 1000



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 162/350 (46%), Gaps = 66/350 (18%)

Query: 57  RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 115
           ++ S+P SI+         +  N+ S LP E+  L KL  L+L  N ++   +   +L  
Sbjct: 35  KLASLPPSIAEYKDCERLNLRCNSFSTLPPEISHLKKLNELNLSENCIENIPMSLYKLTA 94

Query: 116 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           L+VL+++ N + G L P+I K+  L+KL L+ N +  +  +++N    AL          
Sbjct: 95  LTVLNMNGNEIIGKLQPDISKLVNLQKLDLSVNNIEEIPRTILN--LCAL---------- 142

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
                                   +EL L    LS IP E+ +   +T L+LS+N + EL
Sbjct: 143 ------------------------QELDLHYNMLSTIPCEVGQLVHLTDLNLSQNQLTEL 178

Query: 235 PPELSSCASLQ-----------------------TLILSRNKIKDWPDAILTSLSSLSCL 271
           P  L +   LQ                       TL LS+N+I + P +I   L SL  L
Sbjct: 179 PITLGNLKRLQSLRVSDNKLLSVSMEIGMLVELRTLDLSKNEIVEIPSSI-GKLKSLKML 237

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
            +D N L  +P D  K +  LQ +++S N I   PE+     L +LQ L  +  QL+  P
Sbjct: 238 HIDRNKLTNLPIDIGK-LKNLQEINMSMNKILDFPES--IGGLVNLQFLNAKNNQLKCLP 294

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
              + L +LR +++S N ++S+P     L  L  LD+S N++ +LPP +G
Sbjct: 295 VSFVNLSKLREVNVSNNYIESLPRSIGKLKDLKYLDISHNHLESLPPSIG 344



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 176/398 (44%), Gaps = 71/398 (17%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L   P  + S S L  L+L  N I  IP  I     LA   +  N + ++P E+G +++L
Sbjct: 548 LKNFPLQLCSASELYHLNLSCNNIEEIPPGICNLQRLAIIDVCENKIRSIPKEIGNMNRL 607

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L + +N++       C+LR L++LD+ NN+L  LPP+ G++  L+ L L+GN      
Sbjct: 608 KELHISNNKIGNIPEPLCKLRELTLLDIRNNNLKELPPQFGELHELQILQLSGN------ 661

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
             + N   PA                        I+  T+L     +L L G N+++IPS
Sbjct: 662 --VFNEFPPA------------------------ISKLTKLV----KLYLSGNNMTSIPS 691

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL-SSLSCLK 272
            I     + ++ +  N I ELP EL     L+  I+    I++  D  L    + LS LK
Sbjct: 692 TIGRLKSLEEMSIDGNIITELPAEL-----LELQIIKLQLIENQQDTPLKDFVAELSRLK 746

Query: 273 LD-------------NNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 319
            +             N+ L  +   G K    +   D+  N+    +N        L   
Sbjct: 747 QNGSTVAISPRIINRNSKLNSICVTGIK--TGVSSTDVCKNVCMKGQNAIKKMWDELDIE 804

Query: 320 YLRRMQ------------LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
            LRR++            L++ P  I R  +L+ L+L  N L ++PE   NLTSL  L+L
Sbjct: 805 TLRRLEEDTSDIDFANRDLQKLPGVIGRFAELKKLNLKSNHLDTLPEEVSNLTSLESLNL 864

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
           +DN+    P  L  LE +L  L L+ N L ++  ++++
Sbjct: 865 ADNSFENYPSVLSHLE-NLVTLNLNHNKLTAMHISLVN 901



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 104/206 (50%), Gaps = 26/206 (12%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           + ++SL+ M L+++P  I E  +  +L+L  NS   LPPE+S    L  L LS N I++ 
Sbjct: 26  TTDISLQFMKLASLPPSIAEYKDCERLNLRCNSFSTLPPEISHLKKLNELNLSENCIENI 85

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P + L  L++L+ L ++ N +          I  LQ              P  S L +LQ
Sbjct: 86  PMS-LYKLTALTVLNMNGNEI----------IGKLQ--------------PDISKLVNLQ 120

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L L    + E P  IL L  L+ LDL  N L +IP     L  LT+L+LS N ++ LP 
Sbjct: 121 KLDLSVNNIEEIPRTILNLCALQELDLHYNMLSTIPCEVGQLVHLTDLNLSQNQLTELPI 180

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            LG L+  LQ+LR+  N L S+   I
Sbjct: 181 TLGNLK-RLQSLRVSDNKLLSVSMEI 205



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 35/268 (13%)

Query: 35   LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
            L  +P  IG  + L +L+L  N + ++P  +S   SL    + +N+    P+ L  L  L
Sbjct: 823  LQKLPGVIGRFAELKKLNLKSNHLDTLPEEVSNLTSLESLNLADNSFENYPSVLSHLENL 882

Query: 95   GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK-----------------MT 137
             TL+L+ N+L    +    ++   LD S+N+L  +P  + +                 + 
Sbjct: 883  VTLNLNHNKLTAMHISLVNIK--ELDASHNNLVAIPNTVSQASQLTNKINDDPSITLDLK 940

Query: 138  TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            +L+ L LT N L ++ S        +LL+     + +N        K   I    R+   
Sbjct: 941  SLKVLRLTHNKLTSIPS------VDSLLELTVLDISDN--------KLQKIPKQIRILKN 986

Query: 198  SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             KEL L    +  +P EI    E+ +LD+S N ++ LPPE+ +  +LQ+L + RN++ + 
Sbjct: 987  LKELYLSNNEIKTVPCEITHLTELHELDISNNELEHLPPEIDNMTNLQSLYIQRNRLMEL 1046

Query: 258  PDAILTSLSSLSCLKLD-NNPLRQVPSD 284
            P  I+  + +L  +    N+ +R+ P+D
Sbjct: 1047 PRTIV-HIDNLKYIDASGNSSMREPPAD 1073



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 127/283 (44%), Gaps = 37/283 (13%)

Query: 72   AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 130
            ++    N  L  LP  +G+ ++L  L+L SN L     E   L  L  L+L++NS    P
Sbjct: 814  SDIDFANRDLQKLPGVIGRFAELKKLNLKSNHLDTLPEEVSNLTSLESLNLADNSFENYP 873

Query: 131  PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL--- 187
              +  +  L  L L  N L  +  SLVN             +P N  S+AS     +   
Sbjct: 874  SVLSHLENLVTLNLNHNKLTAMHISLVNIKELDASHNNLVAIP-NTVSQASQLTNKINDD 932

Query: 188  --ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 245
              IT+  +   + K L L    L++IPS +    E+T LD+S N +Q++P ++    +L+
Sbjct: 933  PSITLDLK---SLKVLRLTHNKLTSIPS-VDSLLELTVLDISDNKLQKIPKQIRILKNLK 988

Query: 246  TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 305
             L LS N+IK  P  I T L+ L  L + NN L  +P                       
Sbjct: 989  ELYLSNNEIKTVPCEI-THLTELHELDISNNELEHLP----------------------- 1024

Query: 306  ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
              P   ++ +LQ LY++R +L E P  I+ +  L+ +D S NS
Sbjct: 1025 --PEIDNMTNLQSLYIQRNRLMELPRTIVHIDNLKYIDASGNS 1065


>gi|418668210|ref|ZP_13229613.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756067|gb|EKR17694.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 379

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 118/350 (33%), Positives = 168/350 (48%), Gaps = 43/350 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 166

Query: 170 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 167 SLNLSYNQIKTIPKEIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 218

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  +     K+
Sbjct: 219 NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-RQLKNLQTLNLRNNRLTTLS----KE 273

Query: 289 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
           I  LQ                     +L+ L LR  QL   P  I +L+ L++LDL  N 
Sbjct: 274 IEQLQ---------------------NLKSLDLRSNQLTTFPKGIGQLKNLQVLDLGSNQ 312

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L ++PEG   L +L  LDL  N ++ LP E+G L+ +LQ L L+ N L S
Sbjct: 313 LTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQ-NLQELFLNNNQLSS 361



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 157/327 (48%), Gaps = 24/327 (7%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+   L    I     L EL  +KN L  +P+ IG L  L +L+L  N+I +IP 
Sbjct: 53  LDLSANRFKTLPKE-IGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L   Y+ NN L+ LP E+G+L KL  L L  NQL     E  QL+ L  L+LS
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N +  +P EI K+  L+ L L  N L TL   +              +L   +  + ST
Sbjct: 172 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI-------------GQLQNLQSLDLST 218

Query: 183 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
            +  L T+   +      ++L L    L+ +P+EI +   +  L+L  N +  L  E+  
Sbjct: 219 NR--LTTLPQEIGHLQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSKEIEQ 276

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             +L++L L  N++  +P  I   L +L  L L +N L  +P +G   +  LQ LDL  N
Sbjct: 277 LQNLKSLDLRSNQLTTFPKGI-GQLKNLQVLDLGSNQLTTLP-EGIGQLKNLQTLDLDSN 334

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQL 326
            + +LP+      L +LQEL+L   QL
Sbjct: 335 QLTTLPQ--EIGQLQNLQELFLNNNQL 359



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/288 (33%), Positives = 142/288 (49%), Gaps = 21/288 (7%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RL 172
           L++  LDLS N    LP EIGK+  L++L L  N L  L   +        LK LR   L
Sbjct: 48  LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEI------GQLKNLRKLNL 101

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
             N+        E L  + +        L L    L+ +P EI +  ++  L L +N + 
Sbjct: 102 SANQIKTIPKEIEKLQKLQS--------LYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT 153

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            LP E+    +L++L LS N+IK  P  I   L  L  L LDNN L  +P +    +  L
Sbjct: 154 TLPQEIGQLKNLKSLNLSYNQIKTIPKEI-EKLQKLQSLGLDNNQLTTLPQE-IGQLQNL 211

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           Q LDLS N + +LP+      L +LQ+LYL   QL   P +I +L+ L+ L+L  N L +
Sbjct: 212 QSLDLSTNRLTTLPQ--EIGHLQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTT 269

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           + +  + L +L  LDL  N ++  P  +G L+ +LQ L L  N L ++
Sbjct: 270 LSKEIEQLQNLKSLDLRSNQLTTFPKGIGQLK-NLQVLDLGSNQLTTL 316



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 114/222 (51%), Gaps = 8/222 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+SE+ T  +    +   L V  + L L       +P EI +   + +L+L++N +  LP
Sbjct: 30  EESESGTYTDLAKALQNPLKV--RTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +L+ L LS N+IK  P  I   L  L  L L NN L  +P +    +  LQ L
Sbjct: 88  KEIGQLKNLRKLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L  N + +LP+      L +L+ L L   Q++  P +I +LQ+L+ L L  N L ++P+
Sbjct: 146 YLPKNQLTTLPQ--EIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQ 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
               L +L  LDLS N ++ LP E+G L+ +LQ L L  N L
Sbjct: 204 EIGQLQNLQSLDLSTNRLTTLPQEIGHLQ-NLQDLYLVSNQL 244



 Score = 44.7 bits (104), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ +
Sbjct: 280 LKSLDLRSNQLTTFPKG-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTT 338

Query: 61  IPSSISGCCSLAEFYMGNNALSA 83
           +P  I    +L E ++ NN LS+
Sbjct: 339 LPQEIGQLQNLQELFLNNNQLSS 361



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 1/66 (1%)

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
           ++R LDLS N  +++P+    L +L EL+L+ N ++ LP E+G L+ +L+ L L  N ++
Sbjct: 49  KVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLK-NLRKLNLSANQIK 107

Query: 398 SIRRTI 403
           +I + I
Sbjct: 108 TIPKEI 113


>gi|124003637|ref|ZP_01688486.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991206|gb|EAY30658.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 633

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 194/405 (47%), Gaps = 44/405 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++ GNK   +  N I   + L       + +  +PET+G+LS L  L L   RI  
Sbjct: 213 LKSLNLSGNKFHCVPVN-IGKLSKLVTFTLKSDRIKALPETMGTLSNLQNLTLSSCRIQQ 271

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P S+     + +  + NN +   PA + KLS L  L L  NQLK        LR LS L
Sbjct: 272 LPESMQQLKQIGKLALDNNRIEKFPAVITKLSSLVYLKLQKNQLKHLPESIGNLRKLSHL 331

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LSNN L  LP  IG +  L  L +  N L  L +++              +L E     
Sbjct: 332 SLSNNHLKKLPDSIGNLAQLMVLSVARNQLDALPATI-------------GKLSE----- 373

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              +EL+LE   LS +P ++ +   +T+L L+ N +  LPP+LS
Sbjct: 374 ------------------LRELNLEQNQLSCLPQQVTQILTLTQLKLTYNKLTHLPPKLS 415

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +   L  L LS N+++  P + L  L +L  L +D N L  +P  G  ++  L +L+LSY
Sbjct: 416 NLQQLSLLNLSYNQLQVLPKS-LGKLKNLHQLSVDGNKLTHLPP-GIGNLHRLSLLNLSY 473

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +  LP++     L +L +L +   +L E P  I  L++L +L L+ N+L ++PE    
Sbjct: 474 NQLQVLPKS--LGKLKNLHQLSVDGNKLTELPKIIYDLKKLFLLSLNYNALTALPESIGQ 531

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L+ +  L+L  N ++ LP  +G L   +  L L+GN L  + ++I
Sbjct: 532 LSKVVHLNLEGNQLTQLPESIGQLSKVVH-LNLEGNQLTQLPKSI 575



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 177/398 (44%), Gaps = 67/398 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL ++ N++      +I   + L  L   KN L  +PE+IG+L +L  L L  N +  
Sbjct: 282 IGKLALDNNRIEKFPA-VITKLSSLVYLKLQKNQLKHLPESIGNLRKLSHLSLSNNHLKK 340

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVL 119
           +P SI     L    +  N L ALPA +GKLS+L  L+L  NQL     +  Q L L+ L
Sbjct: 341 LPDSIGNLAQLMVLSVARNQLDALPATIGKLSELRELNLEQNQLSCLPQQVTQILTLTQL 400

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L+ N L+ LPP++  +  L  L L+ N L+ L  SL        LK L           
Sbjct: 401 KLTYNKLTHLPPKLSNLQQLSLLNLSYNQLQVLPKSL------GKLKNLH---------- 444

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                               +LS++G  L+ +P  I     ++ L+LS N +Q LP  L 
Sbjct: 445 --------------------QLSVDGNKLTHLPPGIGNLHRLSLLNLSYNQLQVLPKSLG 484

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L  L +  NK+ + P  I                          D+  L +L L+Y
Sbjct: 485 KLKNLHQLSVDGNKLTELPKIIY-------------------------DLKKLFLLSLNY 519

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N + +LPE+     L  +  L L   QL + P  I +L ++  L+L  N L  +P+   N
Sbjct: 520 NALTALPES--IGQLSKVVHLNLEGNQLTQLPESIGQLSKVVHLNLEGNQLTQLPKSIGN 577

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           + SL  L+L +N ++ LP  +  L   L+ L LD NP+
Sbjct: 578 MRSLYALNLKNNQLTKLPQTIQKLR-GLRFLLLDKNPI 614



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 79/152 (51%), Gaps = 2/152 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S L++  N+L VL  +L      L +L    N L  +P+ I  L +L  L L+ N + +
Sbjct: 466 LSLLNLSYNQLQVLPKSL-GKLKNLHQLSVDGNKLTELPKIIYDLKKLFLLSLNYNALTA 524

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI     +    +  N L+ LP  +G+LSK+  L+L  NQL +       +R L  L
Sbjct: 525 LPESIGQLSKVVHLNLEGNQLTQLPESIGQLSKVVHLNLEGNQLTQLPKSIGNMRSLYAL 584

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
           +L NN L+ LP  I K+  LR LLL  NP+ T
Sbjct: 585 NLKNNQLTKLPQTIQKLRGLRFLLLDKNPIPT 616



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 69/139 (49%), Gaps = 9/139 (6%)

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSS 312
           I++    +L+S S+L+ L+     L ++P   F+ IP +Q L L  N   L E P   + 
Sbjct: 134 IQNLKHPVLSS-STLNLLEFG---LEKLPPLVFQ-IPKIQTLCLQSN--RLTEIPTEINQ 186

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L HLQEL L   QL E P  I  L  L+ L+LS N    +P     L+ L    L  + I
Sbjct: 187 LTHLQELNLNNNQLTEFPLAITHLTTLKSLNLSGNKFHCVPVNIGKLSKLVTFTLKSDRI 246

Query: 373 SALPPELGLLEPSLQALRL 391
            ALP  +G L  +LQ L L
Sbjct: 247 KALPETMGTLS-NLQNLTL 264


>gi|398341355|ref|ZP_10526058.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 401

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 165/348 (47%), Gaps = 42/348 (12%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P+ IG L  L  L+L+ N++ ++P  I    +L E ++  N L+  P E+G+L  L
Sbjct: 58  LKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNL 117

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
            TL L  N+L     E  QL+ L  L L+ N  +  P EIG++  L++L L  N L+TL 
Sbjct: 118 QTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLP 177

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
           + +        L+ LR                              EL L    L  + +
Sbjct: 178 NEI------GQLQNLR------------------------------ELHLSYNQLKTLSA 201

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           EI +   +  LDL+ N ++ LP E+    +LQ L L+ N+ K  P+ I   L +L  L L
Sbjct: 202 EIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEI-GQLKNLQVLDL 260

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
             N  + VP +    +  LQ+L L+ N   ++PE      L +LQ L L   QL   P +
Sbjct: 261 GYNQFKTVPEE-IGQLKNLQMLFLNNNQFKTVPEET--GQLKNLQMLSLNANQLTTLPNE 317

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           I +L+ LR L LS N L+++      L +L +L L DN +  LP E+G
Sbjct: 318 IRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEIG 365



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 126/254 (49%), Gaps = 15/254 (5%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N+LT L    I     L EL  + N     P+ IG L  L +L+L+ N++ ++P+ I   
Sbjct: 125 NRLTTLPKE-IGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQL 183

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 127
            +L E ++  N L  L AE+G+L  L  LDL+ NQLK    E  QL+ L +LDL+NN   
Sbjct: 184 QNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFK 243

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            +P EIG++  L+ L L  N  +T+   +        LK L+     N  ++  T  E+ 
Sbjct: 244 TVPEEIGQLKNLQVLDLGYNQFKTVPEEI------GQLKNLQMLFLNN--NQFKTVPEET 295

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
             +        + LSL    L+ +P+EI +   + +L LS N ++ L  E+    +L+ L
Sbjct: 296 GQLKNL-----QMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKL 350

Query: 248 ILSRNKIKDWPDAI 261
            L  N++K  P  I
Sbjct: 351 SLRDNQLKTLPKEI 364



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 156/326 (47%), Gaps = 43/326 (13%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL--------------------- 152
           L + VLDL+   L  LP EIG++  L+ L L  N L TL                     
Sbjct: 46  LDVRVLDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLT 105

Query: 153 -----RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL----SL 203
                   L N  T  L K   + LP+ E  +    +E L     + +   KE+    +L
Sbjct: 106 TFPKEIGQLKNLQTLVLSKNRLTTLPK-EIGQLKNLRE-LYLNTNQFTAFPKEIGQLKNL 163

Query: 204 EGMNLSA-----IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           + +NL A     +P+EI +   + +L LS N ++ L  E+    +LQ L L+ N++K  P
Sbjct: 164 QQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLP 223

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
             I   L +L  L L+NN  + VP +    +  LQ+LDL YN   ++PE      L +LQ
Sbjct: 224 KEI-GQLKNLQMLDLNNNQFKTVPEE-IGQLKNLQVLDLGYNQFKTVPE--EIGQLKNLQ 279

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L+L   Q +  P +  +L+ L++L L+ N L ++P   + L +L EL LS N +  L  
Sbjct: 280 MLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSA 339

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
           E+G L+ +L+ L L  N L+++ + I
Sbjct: 340 EIGQLK-NLKKLSLRDNQLKTLPKEI 364



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 109/214 (50%), Gaps = 8/214 (3%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L    L  +P EI +   +  L+L+ N +  LP E+    +LQ L
Sbjct: 38  LTKALKNPLDVRVLDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQEL 97

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL-DLSYNIASLPE 306
            LS N++  +P  I   L +L  L L  N L  +P    K+I  L+ L +L  N      
Sbjct: 98  HLSGNQLTTFPKEI-GQLKNLQTLVLSKNRLTTLP----KEIGQLKNLRELYLNTNQFTA 152

Query: 307 NPP-FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
            P     L +LQ+L L   QL+  P +I +LQ LR L LS N L+++      L +L  L
Sbjct: 153 FPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVL 212

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           DL+DN +  LP E+G L+ +LQ L L+ N  +++
Sbjct: 213 DLNDNQLKTLPKEIGQLK-NLQMLDLNNNQFKTV 245


>gi|421088203|ref|ZP_15549031.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003188|gb|EKO53634.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 401

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 167/352 (47%), Gaps = 42/352 (11%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+  L  +P+ IG L  L  L+L+ N++ ++P  I    +L E ++  N L+  P E+G+
Sbjct: 54  SEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQ 113

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L TL L  N+L     E  QL+ L  L L+ N  +  P EIG++  L++L L  N L
Sbjct: 114 LKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQL 173

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
           +TL + +        L+ LR                              EL L    L 
Sbjct: 174 KTLPNEI------GQLQNLR------------------------------ELHLSYNQLK 197

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            + +EI +   +  LDL+ N ++ LP E+    +LQ L L+ N+ K  P+ I   L +L 
Sbjct: 198 TLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEI-GQLKNLQ 256

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
            L L  N  + VP +    +  LQ+L L+ N   ++PE      L +LQ L L   QL  
Sbjct: 257 VLDLGYNQFKTVPEE-IGQLKNLQMLFLNNNQFKTVPEET--GQLKNLQMLSLNANQLTT 313

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
            P +I +L+ LR L LS N L+++      L +L +L L DN +  LP E+G
Sbjct: 314 LPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEIG 365



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 156/326 (47%), Gaps = 43/326 (13%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL--------------------- 152
           L + VLDLS   L  LP EIG++  L+ L L  N L TL                     
Sbjct: 46  LDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLT 105

Query: 153 -----RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL----SL 203
                   L N  T  L K   + LP+ E  +    +E L     + +   KE+    +L
Sbjct: 106 TFPKEIGQLKNLQTLVLSKNRLTTLPK-EIGQLKNLRE-LYLNTNQFTAFPKEIGQLKNL 163

Query: 204 EGMNLSA-----IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           + +NL A     +P+EI +   + +L LS N ++ L  E+    +LQ L L+ N++K  P
Sbjct: 164 QQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLP 223

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
             I   L +L  L L+NN  + VP +    +  LQ+LDL YN   ++PE      L +LQ
Sbjct: 224 KEI-GQLKNLQMLDLNNNQFKTVPEE-IGQLKNLQVLDLGYNQFKTVPE--EIGQLKNLQ 279

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L+L   Q +  P +  +L+ L++L L+ N L ++P   + L +L EL LS N +  L  
Sbjct: 280 MLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSA 339

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
           E+G L+ +L+ L L  N L+++ + I
Sbjct: 340 EIGQLK-NLKKLSLRDNQLKTLPKEI 364



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 126/254 (49%), Gaps = 15/254 (5%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N+LT L    I     L EL  + N     P+ IG L  L +L+L+ N++ ++P+ I   
Sbjct: 125 NRLTTLPKE-IGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQL 183

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 127
            +L E ++  N L  L AE+G+L  L  LDL+ NQLK    E  QL+ L +LDL+NN   
Sbjct: 184 QNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFK 243

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            +P EIG++  L+ L L  N  +T+   +        LK L+     N  ++  T  E+ 
Sbjct: 244 TVPEEIGQLKNLQVLDLGYNQFKTVPEEI------GQLKNLQMLFLNN--NQFKTVPEET 295

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
             +        + LSL    L+ +P+EI +   + +L LS N ++ L  E+    +L+ L
Sbjct: 296 GQLKNL-----QMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKL 350

Query: 248 ILSRNKIKDWPDAI 261
            L  N++K  P  I
Sbjct: 351 SLRDNQLKTLPKEI 364



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 109/214 (50%), Gaps = 8/214 (3%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L    L  +P EI +   +  L+L+ N +  LP E+    +LQ L
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQEL 97

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL-DLSYNIASLPE 306
            LS N++  +P  I   L +L  L L  N L  +P    K+I  L+ L +L  N      
Sbjct: 98  HLSGNQLTTFPKEI-GQLKNLQTLVLSKNRLTTLP----KEIGQLKNLRELYLNTNQFTA 152

Query: 307 NPP-FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
            P     L +LQ+L L   QL+  P +I +LQ LR L LS N L+++      L +L  L
Sbjct: 153 FPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVL 212

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           DL+DN +  LP E+G L+ +LQ L L+ N  +++
Sbjct: 213 DLNDNQLKTLPKEIGQLK-NLQMLDLNNNQFKTV 245


>gi|260788642|ref|XP_002589358.1| hypothetical protein BRAFLDRAFT_77807 [Branchiostoma floridae]
 gi|229274535|gb|EEN45369.1| hypothetical protein BRAFLDRAFT_77807 [Branchiostoma floridae]
          Length = 931

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 201/452 (44%), Gaps = 59/452 (13%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T L  L  S N L  +PE IG L +L RL++H N + S+P +I     L   Y+  N L+
Sbjct: 36  TDLEALDLSNNKLTSIPEAIGRLQKLYRLEVHANMLTSLPQAIVTLQKLTHLYVYRNKLA 95

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 141
            LP  + KL KL  L +  NQL +     C L  L  LD+S N LS  PP + K+  LRK
Sbjct: 96  NLPPGIEKLQKLTLLSIFDNQLTKVPPGVCMLPSLEELDVSKNKLSTFPPGVEKLQKLRK 155

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-EDLITMATRLSVTSKE 200
           L +  N L  + S + + P   +L    ++L           K  +L     +L+     
Sbjct: 156 LYIYDNQLTEVPSGVCSLPNLEVLGVGNNKLSTFPPGVEKLQKLRELNIYGNQLTEVPPG 215

Query: 201 L----SLEGMN-----LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 251
           +    +LE +N     LS  P  + +  ++  L +  N + E+P  + S  +L+ L +  
Sbjct: 216 VCSLPNLEVLNFGNNKLSTFPPGVEKLQKLRDLYIYDNQLTEVPSGVCSLPNLEGLSVYN 275

Query: 252 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE---- 306
           NK+  +P  +   L  L  L + NN L +VPS G   +P L++L +  N I  LP+    
Sbjct: 276 NKLSTFPPGV-EKLQKLRELYIHNNQLTEVPS-GVCSLPNLEVLSVGMNPIRRLPDDVTR 333

Query: 307 ----------NPPFSSLP---------------------------HLQELYLRRMQ---L 326
                     N  F   P                           +LQ L+   ++   L
Sbjct: 334 LTRLKTLGVPNCQFDEFPRQMLQLKTLQKLYAGGCKFDMVPDEVGNLQHLWFLAVENNLL 393

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
           R  P+ +  L  LR++ L  N   ++PE    L ++ +L + +NNI+ LP  L   +  L
Sbjct: 394 RTLPSTMSHLHNLRVIQLWNNKFDTVPEVLCELPAMEKLVIRNNNITRLPTVLHRAD-KL 452

Query: 387 QALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           + L + GNPL    + +  +GT A++ +LK +
Sbjct: 453 RDLDISGNPLTYPPQDVCKQGTGAIMAFLKQE 484



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 166/368 (45%), Gaps = 48/368 (13%)

Query: 35  LNGMPETI-GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 93
           LN  P+T+ G L+    LDL    + SIP  +     L    + NN L+++P  +G+L K
Sbjct: 5   LNLQPQTVDGRLT----LDLTNQGLTSIPEEVFDITDLEALDLSNNKLTSIPEAIGRLQK 60

Query: 94  LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L  L++H+N L         L +L+ L +  N L+ LPP I K+  L  L +  N L  +
Sbjct: 61  LYRLEVHANMLTSLPQAIVTLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKV 120

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
              +               LP  E+ + S  K                       LS  P
Sbjct: 121 PPGVC-------------MLPSLEELDVSKNK-----------------------LSTFP 144

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
             + +  ++ KL +  N + E+P  + S  +L+ L +  NK+  +P  +   L  L  L 
Sbjct: 145 PGVEKLQKLRKLYIYDNQLTEVPSGVCSLPNLEVLGVGNNKLSTFPPGV-EKLQKLRELN 203

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 331
           +  N L +VP  G   +P L++L+   N +++ P  P    L  L++LY+   QL E P+
Sbjct: 204 IYGNQLTEVPP-GVCSLPNLEVLNFGNNKLSTFP--PGVEKLQKLRDLYIYDNQLTEVPS 260

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
            +  L  L  L +  N L + P G + L  L EL + +N ++ +P  +  L P+L+ L +
Sbjct: 261 GVCSLPNLEGLSVYNNKLSTFPPGVEKLQKLRELYIHNNQLTEVPSGVCSL-PNLEVLSV 319

Query: 392 DGNPLRSI 399
             NP+R +
Sbjct: 320 GMNPIRRL 327


>gi|421110782|ref|ZP_15571273.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803879|gb|EKS10006.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 473

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 171/373 (45%), Gaps = 65/373 (17%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +P+ IG+L  L  L+L+ N+  ++P  I     L +  + +N L+ LP E+G+L 
Sbjct: 152 NQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEIGQLQ 211

Query: 93  KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
            L  L+L+SNQL     E   L+ L  LDL  N L+ LP EIG +  L+ L L GN L  
Sbjct: 212 NLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLAA 271

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
           L   + N      L+ L++                              L LEG  L+ +
Sbjct: 272 LPEEIGN------LQNLQT------------------------------LDLEGNQLATL 295

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P EI     +  LDL  N +  LP E+     L+ L L  N++   P  I   L  L  L
Sbjct: 296 PEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPKEI-GKLQKLQWL 354

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 331
            LD+N L+ +P +  +D+  L+IL L  N                        QL   P 
Sbjct: 355 SLDHNQLKTLPKE-IEDLQNLKILSLGSN------------------------QLTTLPK 389

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           ++ +LQ L +LDL  N L ++P+    L +L  LDL  N +  LP E+G L+ +L+ L L
Sbjct: 390 EVGKLQNLIMLDLHGNQLTTLPKEIGKLQNLKMLDLHGNQLMTLPKEIGKLQ-NLKELNL 448

Query: 392 DGNP-LRSIRRTI 403
            GNP LRS +  I
Sbjct: 449 VGNPSLRSQKEKI 461



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 130/288 (45%), Gaps = 13/288 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++  N+ T L    I +   L +L  S N L  +P+ IG L  L +L+L+ N++ +
Sbjct: 167 LQTLNLNSNQFTTLPEE-IGNLQKLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTT 225

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +   I    +L    +G N L+ LP E+G L  L TLDL  NQL     E   L+ L  L
Sbjct: 226 LSKEIGNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLAALPEEIGNLQNLQTL 285

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL  N L+ LP EIG +  L+ L L GN L TL   +        L    +RL       
Sbjct: 286 DLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPKEI 345

Query: 180 ASTTKEDLITM-ATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
               K   +++   +L    KE         LSL    L+ +P E+ +   +  LDL  N
Sbjct: 346 GKLQKLQWLSLDHNQLKTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNLIMLDLHGN 405

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
            +  LP E+    +L+ L L  N++   P  I   L +L  L L  NP
Sbjct: 406 QLTTLPKEIGKLQNLKMLDLHGNQLMTLPKEI-GKLQNLKELNLVGNP 452



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 92/177 (51%), Gaps = 5/177 (2%)

Query: 205 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 264
           G  L+ +P EI     +  L+L+ N    LP E+ +   LQ L LS N++   P  I   
Sbjct: 151 GNQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEI-GQ 209

Query: 265 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRR 323
           L +L  L L++N L  + S    ++  LQ LDL  N + +LPE     +L +LQ L L  
Sbjct: 210 LQNLQKLNLNSNQLTTL-SKEIGNLQNLQTLDLGRNQLTTLPE--EIGNLQNLQTLDLEG 266

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
            QL   P +I  LQ L+ LDL  N L ++PE   NL +L  LDL  N ++ LP E+G
Sbjct: 267 NQLAALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIG 323


>gi|124008181|ref|ZP_01692878.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123986280|gb|EAY26102.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 391

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 117/344 (34%), Positives = 178/344 (51%), Gaps = 25/344 (7%)

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 134
           + N  +  L  ++ +   L  L+L  N+L E   E   L +L  L LSNN L  LPPEIG
Sbjct: 68  LANKDMLVLSKKIARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQLEKLPPEIG 127

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
           K+T L +L ++ N L TL   +  G   +L +YL   +P N+          LIT+   +
Sbjct: 128 KLTHLLELRVSANRLTTLPPEI--GKLQSL-QYLY--IPNNK----------LITLPPEI 172

Query: 195 SVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
              +  K L LE   L+ +P+ I +   +  L L+ N + +LP E+    +L T  L+ N
Sbjct: 173 GQLAQLKRLFLEHNQLTQLPASIGKLNNLQSLILNNNRVNQLPHEIGQLKNLHTFYLANN 232

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FS 311
           ++K+ P  ILT L +L  L L  N L+Q+P      +  LQILDL  N  +  E P   +
Sbjct: 233 RLKELPQEILT-LQNLKKLYLVGNQLQQLPPQ-LAKLDKLQILDLQKN--NFSEVPAAIT 288

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
            L +LQ+L+L   QL     +I +LQ L+IL L +N +  +P    ++ SL  L LSDN 
Sbjct: 289 KLTNLQKLWLNNNQLTSLNAEIGKLQNLQILYLEENKITELPTSIGSIQSLKHLSLSDNM 348

Query: 372 ISALPPELGLLEPSLQALRLDGNPL-RSIRRTILDRGTKAVLKY 414
           +++LP E+G L   LQAL L  N L +  +  I +  +KA + +
Sbjct: 349 LTSLPQEIGQLR-KLQALYLRNNQLPKDEKAKIKEWCSKAYVTF 391



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 156/325 (48%), Gaps = 43/325 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L+++ NKLT L    I   T L +LI S N L  +P  IG L+ L+ L +  NR+ ++P 
Sbjct: 89  LNLQQNKLTELPPE-IGDLTKLQKLILSNNQLEKLPPEIGKLTHLLELRVSANRLTTLPP 147

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I    SL   Y+ NN L  LP E+G+L++L  L L  NQL +      +L  L  L L+
Sbjct: 148 EIGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRLFLEHNQLTQLPASIGKLNNLQSLILN 207

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN ++ LP EIG++  L    L  N L+ L                              
Sbjct: 208 NNRVNQLPHEIGQLKNLHTFYLANNRLKEL------------------------------ 237

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
             ++++T+        K+L L G  L  +P ++ +  ++  LDL +N+  E+P  ++   
Sbjct: 238 -PQEILTLQNL-----KKLYLVGNQLQQLPPQLAKLDKLQILDLQKNNFSEVPAAITKLT 291

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +LQ L L+ N++    +A +  L +L  L L+ N + ++P+     I  L+ L LS N +
Sbjct: 292 NLQKLWLNNNQLTSL-NAEIGKLQNLQILYLEENKITELPT-SIGSIQSLKHLSLSDNML 349

Query: 302 ASLPENPPFSSLPHLQELYLRRMQL 326
            SLP+      L  LQ LYLR  QL
Sbjct: 350 TSLPQE--IGQLRKLQALYLRNNQL 372



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 151/355 (42%), Gaps = 63/355 (17%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           IA +  L  L   +N L  +P  IG L++L +L L  N++  +P  I     L E  +  
Sbjct: 80  IARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQLEKLPPEIGKLTHLLELRVSA 139

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP E+GKL  L  L + +N+L     E  QL +L  L L +N L+ LP  IGK+ 
Sbjct: 140 NRLTTLPPEIGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRLFLEHNQLTQLPASIGKLN 199

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L+ L+L  N +  L   +        LK L +                           
Sbjct: 200 NLQSLILNNNRVNQLPHEI------GQLKNLHT--------------------------- 226

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
                L    L  +P EI     + KL L  N +Q+LPP+L+    LQ L L +N   + 
Sbjct: 227 ---FYLANNRLKELPQEILTLQNLKKLYLVGNQLQQLPPQLAKLDKLQILDLQKNNFSEV 283

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P AI T L++L  L L+NN L  +                         N     L +LQ
Sbjct: 284 PAAI-TKLTNLQKLWLNNNQLTSL-------------------------NAEIGKLQNLQ 317

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
            LYL   ++ E PT I  +Q L+ L LS N L S+P+    L  L  L L +N +
Sbjct: 318 ILYLEENKITELPTSIGSIQSLKHLSLSDNMLTSLPQEIGQLRKLQALYLRNNQL 372



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 8/101 (7%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   T L +L  + N L  +   IG L  L  L L +N+I  +P+SI    SL    + +
Sbjct: 287 ITKLTNLQKLWLNNNQLTSLNAEIGKLQNLQILYLEENKITELPTSIGSIQSLKHLSLSD 346

Query: 79  NALSALPAELGKLSKLGTLDLHSNQL--------KEYCVEA 111
           N L++LP E+G+L KL  L L +NQL        KE+C +A
Sbjct: 347 NMLTSLPQEIGQLRKLQALYLRNNQLPKDEKAKIKEWCSKA 387


>gi|307204168|gb|EFN83009.1| Protein lap4 [Harpegnathos saltator]
          Length = 1538

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 182/389 (46%), Gaps = 43/389 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL+   N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEINRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +  L  L   D  SN +        QLR L+VL L++ SL+ LPP+ G +  L+ L 
Sbjct: 99  PENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N LR+L  SL       L K  R  L +NE                           
Sbjct: 159 LRENLLRSLPESLSQ-----LFKLERLDLGDNE--------------------------- 186

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
               +  +P+ + +   + +L L  N +Q LPPE+    +L  L +S N+++D P+ I  
Sbjct: 187 ----IEELPAHVGKLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPNEI-G 241

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
            L SL+ L L  N + ++P DG  ++  L IL +  N +++L  NP      +LQEL L 
Sbjct: 242 GLESLTDLHLSQNVIEKLP-DGLGELKKLTILKVDQNRLSTL--NPNIGRCENLQELILT 298

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
              L E P  I +L  L  L++ +NS+QS+P    NL  L  L L DN +  LP E+G  
Sbjct: 299 ENFLLELPVSIGKLHNLNNLNVDRNSVQSLPIEIGNLKKLGVLSLRDNKLQYLPTEVGQC 358

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAV 411
             +L  L + GN L+ +  ++++   KAV
Sbjct: 359 S-ALHVLDVSGNRLQYLPYSLINLSLKAV 386



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 160/353 (45%), Gaps = 41/353 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +PE I +L  L   D   N I  +P+      +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LP + G L  L +L+L  N L+       QL +L  LDL +N +  LP  +GK+ 
Sbjct: 139 MSLTNLPPDFGSLEALQSLELRENLLRSLPESLSQLFKLERLDLGDNEIEELPAHVGKLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L++L L  N L+ L   +    T A L    +RL            EDL      L   
Sbjct: 199 ALQELWLDHNQLQHLPPEIGELKTLACLDVSENRL------------EDLPNEIGGLESL 246

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           + +L L    +  +P  + E  ++T L + +N +  L P +  C +LQ LIL+ N + + 
Sbjct: 247 T-DLHLSQNVIEKLPDGLGELKKLTILKVDQNRLSTLNPNIGRCENLQELILTENFLLEL 305

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P +I   L +L+ L +D N ++ +P +                           +L  L 
Sbjct: 306 PVSI-GKLHNLNNLNVDRNSVQSLPIE-------------------------IGNLKKLG 339

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
            L LR  +L+  PT++ +   L +LD+S N LQ +P    NL SL  + LS+N
Sbjct: 340 VLSLRDNKLQYLPTEVGQCSALHVLDVSGNRLQYLPYSLINL-SLKAVWLSEN 391



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 2/156 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L N  I     LT+L  S+N++  +P+ +G L +L  L + QNR+ ++  
Sbjct: 226 LDVSENRLEDLPNE-IGGLESLTDLHLSQNVIEKLPDGLGELKKLTILKVDQNRLSTLNP 284

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
           +I  C +L E  +  N L  LP  +GKL  L  L++  N ++   +E   L +L VL L 
Sbjct: 285 NIGRCENLQELILTENFLLELPVSIGKLHNLNNLNVDRNSVQSLPIEIGNLKKLGVLSLR 344

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
           +N L  LP E+G+ + L  L ++GN L+ L  SL+N
Sbjct: 345 DNKLQYLPTEVGQCSALHVLDVSGNRLQYLPYSLIN 380


>gi|307178161|gb|EFN66969.1| Leucine-rich repeat protein SHOC-2 [Camponotus floridanus]
          Length = 624

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 177/394 (44%), Gaps = 47/394 (11%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
           RLDL +  I ++PSS+     L EFY+  N L+ LP E+G L+ L TL L  N L     
Sbjct: 147 RLDLSKASITNLPSSVRELTHLREFYIYGNKLATLPPEIGCLANLETLALSENSLTSLPN 206

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
               L+ L VLDL +N L+ +P  + K+T+L  L L  N     R   VN     L    
Sbjct: 207 TLENLKSLRVLDLRHNKLNEIPDVVYKLTSLTTLFLRFN-----RVKYVNDNIRYLTNLT 261

Query: 169 RSRLPENEDSEASTTKEDLITMATRLSVTSKEL----------------SLEGMNLSAIP 212
              L EN+  E      +L+ + T   V+   L                 L+   L  IP
Sbjct: 262 MLSLRENKIKELPAGVGELVNLIT-FDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIP 320

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
             I     +T+L L  N +  +P  L++C  +    +  N++   PD +L+SLS L+ + 
Sbjct: 321 DTIGNLVSLTRLGLRYNRLSNIPKSLANCKMMDEFSVEGNQVSHLPDGLLSSLSDLTTIT 380

Query: 273 LDNNPLRQVPSDG---FKDIPML-----QILDLSYNIASLPEN--------PPFSSLP-- 314
           L  N     PS G   F ++  +     +I  + Y I S  +N           ++LP  
Sbjct: 381 LSRNNFTAYPSGGPSQFTNVYSINLEHNKIDKIPYAIFSRAKNLTKLNMKENQLTALPLD 440

Query: 315 -----HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
                ++ EL L   QL + P DI  L+ L IL LS N L+ IP    NL  L  LDL +
Sbjct: 441 IGTWVNMVELNLGTNQLMKIPDDIQYLKSLEILILSNNLLKRIPATIANLRKLRVLDLEE 500

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           N I +LP E+G L   LQ L L  N + S+ R I
Sbjct: 501 NRIDSLPNEIGFLR-ELQKLILQSNQVVSLPRAI 533



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 210/460 (45%), Gaps = 47/460 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +  + GNKL  L    I     L  L  S+N L  +P T+ +L  L  LDL  N++  
Sbjct: 168 LREFYIYGNKLATLPPE-IGCLANLETLALSENSLTSLPNTLENLKSLRVLDLRHNKLNE 226

Query: 61  IPSSISGCCSLAEF---------------YMGN--------NALSALPAELGKLSKLGTL 97
           IP  +    SL                  Y+ N        N +  LPA +G+L  L T 
Sbjct: 227 IPDVVYKLTSLTTLFLRFNRVKYVNDNIRYLTNLTMLSLRENKIKELPAGVGELVNLITF 286

Query: 98  DLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           D+  N L+    E    ++LS LDL +N L  +P  IG + +L +L L  N L  +  SL
Sbjct: 287 DVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGNLVSLTRLGLRYNRLSNIPKSL 346

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA-TRLSVTS------------KELSL 203
            N           +++    D   S+   DL T+  +R + T+              ++L
Sbjct: 347 ANCKMMDEFSVEGNQVSHLPDGLLSSLS-DLTTITLSRNNFTAYPSGGPSQFTNVYSINL 405

Query: 204 EGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 262
           E   +  IP  I+  A  +TKL++  N +  LP ++ +  ++  L L  N++   PD I 
Sbjct: 406 EHNKIDKIPYAIFSRAKNLTKLNMKENQLTALPLDIGTWVNMVELNLGTNQLMKIPDDI- 464

Query: 263 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 321
             L SL  L L NN L+++P+    ++  L++LDL  N I SLP    F  L  LQ+L L
Sbjct: 465 QYLKSLEILILSNNLLKRIPAT-IANLRKLRVLDLEENRIDSLPNEIGF--LRELQKLIL 521

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELG 380
           +  Q+   P  I  L  L  L + +N+L  +PE    L +L  L ++DN N+  LP EL 
Sbjct: 522 QSNQVVSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENLESLYINDNANLHNLPFELA 581

Query: 381 LLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           L   +L  + ++  PL  I   I+  G   V+++LK + P
Sbjct: 582 LC-TNLSIMSIENCPLSQIPAEIVAGGPSLVIQFLKMQGP 620



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 4/205 (1%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           K L L   +++ +PS + E   + +  +  N +  LPPE+   A+L+TL LS N +   P
Sbjct: 146 KRLDLSKASITNLPSSVRELTHLREFYIYGNKLATLPPEIGCLANLETLALSENSLTSLP 205

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 318
           +  L +L SL  L L +N L ++P   +K +  L  L L +N      N     L +L  
Sbjct: 206 NT-LENLKSLRVLDLRHNKLNEIPDVVYK-LTSLTTLFLRFNRVKYV-NDNIRYLTNLTM 262

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L LR  +++E P  +  L  L   D+S N L+ +PE   N   L+ LDL  N +  +P  
Sbjct: 263 LSLRENKIKELPAGVGELVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDT 322

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTI 403
           +G L  SL  L L  N L +I +++
Sbjct: 323 IGNL-VSLTRLGLRYNRLSNIPKSL 346



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           R + ++ LDLS+ S+ ++P   + LT L E  +  N ++ LPPE+G L  +L+ L L  N
Sbjct: 141 REECVKRLDLSKASITNLPSSVRELTHLREFYIYGNKLATLPPEIGCL-ANLETLALSEN 199

Query: 395 PLRSIRRTILDRGTKAVLKYLKDKIPE 421
            L S+  T+ +  +  VL    +K+ E
Sbjct: 200 SLTSLPNTLENLKSLRVLDLRHNKLNE 226


>gi|322510775|gb|ADX06089.1| putative leucine-rich repeat ribonuclease inhibitor family protein
           [Organic Lake phycodnavirus 1]
          Length = 598

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 177/353 (50%), Gaps = 18/353 (5%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           + N L+ +P++IG+L  L +LD+  N +  +P SI     L +  + NN L  LP  +G 
Sbjct: 30  ANNELSTIPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIRNNELGQLPDSIGN 89

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LD+  N L +       L  L +L+++ N L+ LP  IG +  +R L +  N L
Sbjct: 90  LIHLQQLDIEDNWLNQLPESIGNLIELEILNVNLNRLTLLPENIGNIKKMRSLYIESNEL 149

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS----------- 198
             L  S+        L    +RL +  +S  + T   ++ +     +T            
Sbjct: 150 TLLPVSIGGLQNLEQLFTSSNRLSQIPESICNLTNLQMLDIKDN-ELTQLPKHIGKLRKL 208

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           K+L +    LS +P  I     +  LD+  N + ELP  +S+  +LQ L +  N++   P
Sbjct: 209 KKLDIGNNELSELPESITNLTHLQMLDIGYNELSELPESISNLTNLQELYIENNQLTQLP 268

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
           ++I T+L++L  L + NN L Q+P     ++  LQIL ++ N ++ LPE    S+L +LQ
Sbjct: 269 ESI-TNLTNLRMLYIHNNQLSQLPL-RIGNLTHLQILAIANNKLSELPE--RISNLTNLQ 324

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
           +LY++  QL   P  I  L  L++LD+  N L  IPE   NLT+L  L L++N
Sbjct: 325 KLYIQNNQLTRLPLRIGNLTNLKVLDIKNNQLTQIPESISNLTNLETLVLTNN 377



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 172/347 (49%), Gaps = 32/347 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+L  L ++ I +   L +L    N LN +PE+IG+L  L  L+++ NR+  
Sbjct: 70  LQQLDIRNNELGQLPDS-IGNLIHLQQLDIEDNWLNQLPESIGNLIELEILNVNLNRLTL 128

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P +I     +   Y+ +N L+ LP  +G L  L  L   SN+L +     C L  L +L
Sbjct: 129 LPENIGNIKKMRSLYIESNELTLLPVSIGGLQNLEQLFTSSNRLSQIPESICNLTNLQML 188

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+ +N L+ LP  IGK+  L+KL +  N L  L  S+ N     +L      +  NE SE
Sbjct: 189 DIKDNELTQLPKHIGKLRKLKKLDIGNNELSELPESITNLTHLQMLD-----IGYNELSE 243

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
              +  +L  +        +EL +E   L+ +P  I     +  L +  N + +LP  + 
Sbjct: 244 LPESISNLTNL--------QELYIENNQLTQLPESITNLTNLRMLYIHNNQLSQLPLRIG 295

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +   LQ L ++ NK+ + P+ I ++L++L  L + NN L ++P     ++  L++LD+  
Sbjct: 296 NLTHLQILAIANNKLSELPERI-SNLTNLQKLYIQNNQLTRLPL-RIGNLTNLKVLDIKN 353

Query: 300 N-IASLPENPPFSSLPHLQEL------------YLRRMQLREAPTDI 333
           N +  +PE    S+L +L+ L            +LR+M +R    D+
Sbjct: 354 NQLTQIPE--SISNLTNLETLVLTNNPNLFIPDWLRQMNIRFIHYDV 398



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 176/409 (43%), Gaps = 66/409 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M  L +E N+LT+L  + I     L +L  S N L+ +PE+I +L+ L  LD+  N +  
Sbjct: 139 MRSLYIESNELTLLPVS-IGGLQNLEQLFTSSNRLSQIPESICNLTNLQMLDIKDNELTQ 197

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I     L +  +GNN LS LP  +  L+ L  LD+  N+L E       L  L  L
Sbjct: 198 LPKHIGKLRKLKKLDIGNNELSELPESITNLTHLQMLDIGYNELSELPESISNLTNLQEL 257

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            + NN L+ LP  I  +T LR L +  N L                    S+LP      
Sbjct: 258 YIENNQLTQLPESITNLTNLRMLYIHNNQL--------------------SQLPLR---- 293

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                   I   T L +    L++    LS +P  I     + KL +  N +  LP  + 
Sbjct: 294 --------IGNLTHLQI----LAIANNKLSELPERISNLTNLQKLYIQNNQLTRLPLRIG 341

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  +L+ L +  N++   P++I ++L++L  L L NNP   +P D  +    + I  + Y
Sbjct: 342 NLTNLKVLDIKNNQLTQIPESI-SNLTNLETLVLTNNPNLFIP-DWLR---QMNIRFIHY 396

Query: 300 NIASLPENP-----PFSSLPHLQELYLRRMQLREAPTDILRLQQLR----------ILDL 344
           ++ ++  NP      F+ +   Q   L    L +   DI     ++          I +L
Sbjct: 397 DVNNVDVNPFEVHDVFNKISDEQVEELNDFLLNKITNDIDETIHIKTFIKTKIDALIDEL 456

Query: 345 SQNSLQSIPEGF---KNLTSLTELD-----LSDNNISALPPELGLLEPS 385
           S   LQ  PEG+   ++ TS++ L      L    I  L P LGL +P 
Sbjct: 457 SDQRLQRKPEGYYTNEDGTSVSNLREAWDVLYAERIEGLHPNLGLKDPQ 505



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 6/204 (2%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
            +L    LS IP  I     + +LD+  N + +LP  + +   LQ L +  N++   PD+
Sbjct: 27  FNLANNELSTIPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIRNNELGQLPDS 86

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I  +L  L  L +++N L Q+P +   ++  L+IL+++ N +  LPEN    ++  ++ L
Sbjct: 87  I-GNLIHLQQLDIEDNWLNQLP-ESIGNLIELEILNVNLNRLTLLPEN--IGNIKKMRSL 142

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
           Y+   +L   P  I  LQ L  L  S N L  IPE   NLT+L  LD+ DN ++ LP  +
Sbjct: 143 YIESNELTLLPVSIGGLQNLEQLFTSSNRLSQIPESICNLTNLQMLDIKDNELTQLPKHI 202

Query: 380 GLLEPSLQALRLDGNPLRSIRRTI 403
           G L   L+ L +  N L  +  +I
Sbjct: 203 GKLR-KLKKLDIGNNELSELPESI 225



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 11/91 (12%)

Query: 297 LSYNIASLPENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
           +S+N+A    N   S++P       HLQ+L +R  +L + P  I  L  L+ LD+  N L
Sbjct: 25  ISFNLA----NNELSTIPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIRNNEL 80

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELG 380
             +P+   NL  L +LD+ DN ++ LP  +G
Sbjct: 81  GQLPDSIGNLIHLQQLDIEDNWLNQLPESIG 111


>gi|456982733|gb|EMG19248.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 299

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 159/336 (47%), Gaps = 43/336 (12%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N+LT L    I     L  L   KN L  +P+ IG L  L  L+L  N+I +IP  I   
Sbjct: 4   NQLTTLPQE-IGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKL 62

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 127
             L    + NN L+ LP E+G+L  L +LDL +N+L     E  QL+ L  LDLS N L+
Sbjct: 63  QKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLT 122

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            LP EIG +  L++L L  N L  L + +        LK L++                 
Sbjct: 123 TLPQEIGHLQNLQELYLVSNQLTILPNEI------GQLKNLQT----------------- 159

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
                        L+L    L+ +  EI +   +  LDL  N +   P E+    +LQ L
Sbjct: 160 -------------LNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVL 206

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            L  N++   P+ I   L +L  L LD+N L  +P +  K +  LQ+LDLSYN + +LP+
Sbjct: 207 DLGSNQLTTLPEGI-GQLKNLQTLDLDSNQLTTLPQE-IKQLKNLQLLDLSYNQLKTLPK 264

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 342
                 L +LQ LYL   QL   P +I +LQ L++L
Sbjct: 265 --EIEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVL 298



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 157/330 (47%), Gaps = 42/330 (12%)

Query: 56  NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL- 114
           N++ ++P  I     L   Y+  N L+ LP E+G+L  L +L+L  NQ+K    E  +L 
Sbjct: 4   NQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQ 63

Query: 115 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           +L  L L NN L+ LP EIG++  L+ L L+ N L TL   +        L+ L+S    
Sbjct: 64  KLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI------GQLQNLQS---- 113

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
                                     L L    L+ +P EI     + +L L  N +  L
Sbjct: 114 --------------------------LDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTIL 147

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P E+    +LQTL L  N++      I   L +L  L L +N L   P +    +  LQ+
Sbjct: 148 PNEIGQLKNLQTLNLRNNRLTTLSKEI-EQLQNLKSLDLRSNQLTIFPKE-IGQLKNLQV 205

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           LDL  N + +LPE      L +LQ L L   QL   P +I +L+ L++LDLS N L+++P
Sbjct: 206 LDLGSNQLTTLPEG--IGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLP 263

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLE 383
           +  + L +L  L L  N ++ LP E+G L+
Sbjct: 264 KEIEQLKNLQTLYLGYNQLTVLPKEIGQLQ 293



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 122/262 (46%), Gaps = 38/262 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L ++ N+LT L    I     L  L  S N L  +P+ IG L  L  LDL  NR+ +
Sbjct: 65  LQSLGLDNNQLTTLPQE-IGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTT 123

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+ +N L+ LP E+G+L  L TL+L +N+L     E  QL+ L  L
Sbjct: 124 LPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 183

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL +N L+  P EIG++  L+ L L  N L TL   +        LK L++         
Sbjct: 184 DLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGI------GQLKNLQT--------- 228

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                L L+   L+ +P EI +   +  LDLS N ++ LP E+ 
Sbjct: 229 ---------------------LDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIE 267

Query: 240 SCASLQTLILSRNKIKDWPDAI 261
              +LQTL L  N++   P  I
Sbjct: 268 QLKNLQTLYLGYNQLTVLPKEI 289



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 154/329 (46%), Gaps = 64/329 (19%)

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK 135
           M NN L+ LP E+G+L KL  L L  NQL                      + LP EIG+
Sbjct: 1   MPNNQLTTLPQEIGQLQKLQWLYLPKNQL----------------------TTLPQEIGQ 38

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           +  L+ L L+ N ++T+   +        L+ L+S                         
Sbjct: 39  LKNLKSLNLSYNQIKTIPKEIEK------LQKLQS------------------------- 67

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
                L L+   L+ +P EI +   +  LDLS N +  LP E+    +LQ+L LS N++ 
Sbjct: 68  -----LGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLT 122

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             P  I   L +L  L L +N L  +P++    +  LQ L+L  N + +L +      L 
Sbjct: 123 TLPQEI-GHLQNLQELYLVSNQLTILPNE-IGQLKNLQTLNLRNNRLTTLSK--EIEQLQ 178

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           +L+ L LR  QL   P +I +L+ L++LDL  N L ++PEG   L +L  LDL  N ++ 
Sbjct: 179 NLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTT 238

Query: 375 LPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           LP E+  L+ +LQ L L  N L+++ + I
Sbjct: 239 LPQEIKQLK-NLQLLDLSYNQLKTLPKEI 266


>gi|307180798|gb|EFN68662.1| Protein lap4 [Camponotus floridanus]
          Length = 2056

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 180/389 (46%), Gaps = 43/389 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL+   N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +  L  L   D  SN +        QLR L+VL L++ SL+ LPP+ G +  L+ L 
Sbjct: 99  PENIKNLQALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L++L  SL       L K  R  L +NE                           
Sbjct: 159 LRENLLKSLPESLSQ-----LFKLERLDLGDNE--------------------------- 186

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
               +  +PS I +   + +L L  N +Q LPPE+    +L  L +S N+++D PD I  
Sbjct: 187 ----IEELPSHIGKLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPDEI-G 241

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
            L SL+ L L  N + ++P DG  ++  L IL +  N +++L  NP      +LQEL L 
Sbjct: 242 GLESLTDLHLSQNVIEKLP-DGLGELKKLTILKVDQNRLSTL--NPSIGKCENLQELILT 298

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
              L E P  I +L  L  L++ +NSLQ +P    NL  L  L L DN +  LP E+G  
Sbjct: 299 ENFLLELPVSIGKLCNLNNLNVDRNSLQFLPIEIGNLKKLGVLSLRDNKLQYLPAEVGQC 358

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAV 411
             +L  L + GN L  +  ++++   KAV
Sbjct: 359 S-ALHVLDVSGNRLHYLPYSLINLNLKAV 386



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 104/192 (54%), Gaps = 5/192 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S + +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRSLEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEIHRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D P+ I  +L +L      +NP+ ++P+ GF  +  L +L L+  ++ +LP  P F 
Sbjct: 94  DIPDIPENI-KNLQALQVADFSSNPIPRLPA-GFVQLRNLTVLGLNDMSLTNLP--PDFG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  LQ L LR   L+  P  + +L +L  LDL  N ++ +P     L +L EL L  N 
Sbjct: 150 SLEALQSLELRENLLKSLPESLSQLFKLERLDLGDNEIEELPSHIGKLPALQELWLDHNQ 209

Query: 372 ISALPPELGLLE 383
           +  LPPE+G L+
Sbjct: 210 LQHLPPEIGELK 221



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 158/353 (44%), Gaps = 41/353 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +PE I +L  L   D   N I  +P+      +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPENIKNLQALQVADFSSNPIPRLPAGFVQLRNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LP + G L  L +L+L  N LK       QL +L  LDL +N +  LP  IGK+ 
Sbjct: 139 MSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLFKLERLDLGDNEIEELPSHIGKLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L++L L  N L+ L   +    T A L    +RL            EDL      L   
Sbjct: 199 ALQELWLDHNQLQHLPPEIGELKTLACLDVSENRL------------EDLPDEIGGLESL 246

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           + +L L    +  +P  + E  ++T L + +N +  L P +  C +LQ LIL+ N + + 
Sbjct: 247 T-DLHLSQNVIEKLPDGLGELKKLTILKVDQNRLSTLNPSIGKCENLQELILTENFLLEL 305

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P +I   L +L+ L +D N L+ +P +                           +L  L 
Sbjct: 306 PVSI-GKLCNLNNLNVDRNSLQFLPIE-------------------------IGNLKKLG 339

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
            L LR  +L+  P ++ +   L +LD+S N L  +P    NL +L  + LS+N
Sbjct: 340 VLSLRDNKLQYLPAEVGQCSALHVLDVSGNRLHYLPYSLINL-NLKAVWLSEN 391



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L V+ N+L+ L N  I     L ELI ++N L  +P +IG L  L  L++ +N +  +P 
Sbjct: 272 LKVDQNRLSTL-NPSIGKCENLQELILTENFLLELPVSIGKLCNLNNLNVDRNSLQFLPI 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I     L    + +N L  LPAE+G+ S L  LD+  N+L         L L  + LS 
Sbjct: 331 EIGNLKKLGVLSLRDNKLQYLPAEVGQCSALHVLDVSGNRLHYLPYSLINLNLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|381145579|gb|AFF59222.1| leucine-rich repeat proteins [Scylla paramamosain]
          Length = 630

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 183/392 (46%), Gaps = 43/392 (10%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK---E 106
           RLDL  + I  +PSS++    L EFY+ +N L  LP E+G+L  L TL L  N L    +
Sbjct: 153 RLDLSNSSISQLPSSMNNVTHLVEFYLYSNKLVTLPPEIGRLVNLQTLGLSENSLTSLPD 212

Query: 107 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
             V   QL+  VLDL +N L+ +P  + K+ +L  L L  N +R +   + N      L 
Sbjct: 213 TLVNLVQLK--VLDLRHNKLTEIPDVVYKLPSLITLFLRFNRIRVVGEEIRNLKNLITLS 270

Query: 167 YLRSRLPENEDSEASTTKEDLITMA-TRLSVTSKE---------LSLEGMNLSAIPSEIW 216
              +R+ +  +     T+   + +A   L V ++E         L L+   L  +P  I 
Sbjct: 271 LRENRIRQLPNGIGELTRLGTLDVAHNHLEVLTEEIGNCISLQTLHLQHNELVELPQSIG 330

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL-------------- 262
               +T L L  N ++ +P  LS C +L    +  N+I   PD +L              
Sbjct: 331 NLRNLTCLGLRYNRLKSVPRSLSRCINLDEFNVEGNQISQLPDGLLSSLSNLSSLTLSRN 390

Query: 263 ----------TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
                     +  +++  + L++N + ++P   F     L  L+++YN + SLP +    
Sbjct: 391 SFNSYPIGGPSQFTNVHSINLEHNQVDRIPYGIFSRAKHLTKLNMNYNFLTSLPLD--IG 448

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           S  ++ EL L   QL + P DI  LQ L +L L+ N L+ IP    NL  L  LDL +N 
Sbjct: 449 SWMNMVELNLGTNQLNKVPDDISCLQNLEVLILTNNCLRKIPSSIGNLRKLRVLDLEENR 508

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           +  LPPE+G L+  LQ L +  N L ++ R +
Sbjct: 509 LEGLPPEIGFLK-DLQKLVVQSNQLSALPRAL 539



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 203/444 (45%), Gaps = 50/444 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L  L  S+N L  +P+T+ +L +L  LDL  N++  IP  +    SL   ++  
Sbjct: 191 IGRLVNLQTLGLSENSLTSLPDTLVNLVQLKVLDLRHNKLTEIPDVVYKLPSLITLFLRF 250

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N +  +  E+  L  L TL L  N++++      +L RL  LD+++N L  L  EIG   
Sbjct: 251 NRIRVVGEEIRNLKNLITLSLRENRIRQLPNGIGELTRLGTLDVAHNHLEVLTEEIGNCI 310

Query: 138 TLRKLLLTGNPLRTLRSSLVN--GPTPALLKYLR------------------------SR 171
           +L+ L L  N L  L  S+ N    T   L+Y R                        S+
Sbjct: 311 SLQTLHLQHNELVELPQSIGNLRNLTCLGLRYNRLKSVPRSLSRCINLDEFNVEGNQISQ 370

Query: 172 LPENEDSEASTTKEDLITMATRLSVTS------------KELSLEGMNLSAIPSEIW-EA 218
           LP   D   S+         +R S  S              ++LE   +  IP  I+  A
Sbjct: 371 LP---DGLLSSLSNLSSLTLSRNSFNSYPIGGPSQFTNVHSINLEHNQVDRIPYGIFSRA 427

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
             +TKL+++ N +  LP ++ S  ++  L L  N++   PD I + L +L  L L NN L
Sbjct: 428 KHLTKLNMNYNFLTSLPLDIGSWMNMVELNLGTNQLNKVPDDI-SCLQNLEVLILTNNCL 486

Query: 279 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           R++PS    ++  L++LDL  N +  LP  P    L  LQ+L ++  QL   P  +  L 
Sbjct: 487 RKIPSS-IGNLRKLRVLDLEENRLEGLP--PEIGFLKDLQKLVVQSNQLSALPRALGNLI 543

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPL 396
            L  L + +N+L  +PE    L SL  L L++N  +  LP EL L   +LQ + ++  PL
Sbjct: 544 NLTYLSVGENNLSYLPEEIGTLESLETLYLNENPMLHNLPFELALCT-NLQIMSIENCPL 602

Query: 397 RSIRRTILDRGTKAVLKYLKDKIP 420
             I   I+  G   V+++LK + P
Sbjct: 603 SQIPPEIVAGGPSLVIQFLKMQGP 626



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 105/207 (50%), Gaps = 6/207 (2%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           ++ L L   ++S +PS +     + +  L  N +  LPPE+    +LQTL LS N +   
Sbjct: 151 AQRLDLSNSSISQLPSSMNNVTHLVEFYLYSNKLVTLPPEIGRLVNLQTLGLSENSLTSL 210

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           PD  L +L  L  L L +N L ++P   +K +P L  L L +N I  + E     +L +L
Sbjct: 211 PDT-LVNLVQLKVLDLRHNKLTEIPDVVYK-LPSLITLFLRFNRIRVVGEE--IRNLKNL 266

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L LR  ++R+ P  I  L +L  LD++ N L+ + E   N  SL  L L  N +  LP
Sbjct: 267 ITLSLRENRIRQLPNGIGELTRLGTLDVAHNHLEVLTEEIGNCISLQTLHLQHNELVELP 326

Query: 377 PELGLLEPSLQALRLDGNPLRSIRRTI 403
             +G L  +L  L L  N L+S+ R++
Sbjct: 327 QSIGNLR-NLTCLGLRYNRLKSVPRSL 352



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 112/269 (41%), Gaps = 59/269 (21%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  +++E N++  +   + +    LT+L  + N L  +P  IGS   ++ L+L  N++  
Sbjct: 406 VHSINLEHNQVDRIPYGIFSRAKHLTKLNMNYNFLTSLPLDIGSWMNMVELNLGTNQLNK 465

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P  IS   +L    + NN L  +P+ +G L K                      L VLD
Sbjct: 466 VPDDISCLQNLEVLILTNNCLRKIPSSIGNLRK----------------------LRVLD 503

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           L  N L GLPPEIG +  L+KL++  N L  L  +L N                      
Sbjct: 504 LEENRLEGLPPEIGFLKDLQKLVVQSNQLSALPRALGN---------------------- 541

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI-QELPPELS 239
                 LI + T LSV          NLS +P EI     +  L L+ N +   LP EL+
Sbjct: 542 ------LINL-TYLSVGEN-------NLSYLPEEIGTLESLETLYLNENPMLHNLPFELA 587

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSL 268
            C +LQ + +    +   P  I+    SL
Sbjct: 588 LCTNLQIMSIENCPLSQIPPEIVAGGPSL 616



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 139/299 (46%), Gaps = 43/299 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR---LDLHQNR 57
           + + +VEGN+++ L + L++S + L+ L  S+N  N  P  IG  S+      ++L  N+
Sbjct: 358 LDEFNVEGNQISQLPDGLLSSLSNLSSLTLSRNSFNSYP--IGGPSQFTNVHSINLEHNQ 415

Query: 58  ILSIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLR 115
           +  IP  I S    L +  M  N L++LP ++G    +  L+L +NQL +   + +C   
Sbjct: 416 VDRIPYGIFSRAKHLTKLNMNYNFLTSLPLDIGSWMNMVELNLGTNQLNKVPDDISCLQN 475

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L VL L+NN L  +P  IG +  LR L L  N L  L         P  + +L+      
Sbjct: 476 LEVLILTNNCLRKIPSSIGNLRKLRVLDLEENRLEGL---------PPEIGFLK------ 520

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                     DL           ++L ++   LSA+P  +     +T L +  N++  LP
Sbjct: 521 ----------DL-----------QKLVVQSNQLSALPRALGNLINLTYLSVGENNLSYLP 559

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
            E+ +  SL+TL L+ N +       L   ++L  + ++N PL Q+P +     P L I
Sbjct: 560 EEIGTLESLETLYLNENPMLHNLPFELALCTNLQIMSIENCPLSQIPPEIVAGGPSLVI 618


>gi|17227620|ref|NP_484168.1| hypothetical protein alr0124 [Nostoc sp. PCC 7120]
 gi|17135102|dbj|BAB77648.1| leucine-rich-repeat protein [Nostoc sp. PCC 7120]
          Length = 1119

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 193/398 (48%), Gaps = 44/398 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+ GN L  + + ++     L ELI  +  L  +PE +  L+ L +L L  N+I  
Sbjct: 82  LRKLDISGNPLEGIPD-VVMQILHLEELILIRVQLTEIPEALAKLTNLTQLILSDNQITE 140

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP +++   +L +  +  N ++ +P  L KL+ L  L+L  NQ+ E      +L  L+ L
Sbjct: 141 IPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQL 200

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L  N  + +P  + K+T L +L L+ N                     R+ +PE     
Sbjct: 201 NLRGNQRTEIPEALAKLTNLTRLNLSYNQ--------------------RTEIPE----- 235

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                     +A   ++T  +L L    +  IP  I +   +T L LS N I+E+P  ++
Sbjct: 236 ---------ALAKLTNLT--QLILSDNQIKEIPETIAKLTNLTHLILSGNQIKEIPETIA 284

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L  L L  N+IK+ P+AI   L++L+ L LD N ++++P +    +  L  L LS 
Sbjct: 285 KLTNLTQLGLDGNQIKEIPEAI-AKLTNLTQLGLDGNQIKEIP-EAITKLTNLTHLILSG 342

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N I  +PE    + L +L +L L   Q+ E P  + +L  L  L LS N +  IPE    
Sbjct: 343 NQIKEIPET--IAKLTNLTQLALSSNQITEIPEVLAQLTNLTQLFLSSNQITQIPEALAP 400

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           LT+LT L L  N I+ +P  +  L P L+ L L GNPL
Sbjct: 401 LTNLTTLHLRVNQITQIPEAIESL-PKLELLDLRGNPL 437



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 195/398 (48%), Gaps = 44/398 (11%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           GN L  L   L+ S   L +L  S N L G+P+ +  +  L  L L + ++  IP +++ 
Sbjct: 66  GNNLKTLPIELL-SLPNLRKLDISGNPLEGIPDVVMQILHLEELILIRVQLTEIPEALAK 124

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 126
             +L +  + +N ++ +P  L KL+ L  L+L  NQ+ E      +L  L+ L+LS N +
Sbjct: 125 LTNLTQLILSDNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQI 184

Query: 127 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 186
           + +P  + K+T L +L L GN                     R+ +PE      +  K  
Sbjct: 185 TEIPEALAKLTNLTQLNLRGNQ--------------------RTEIPE------ALAK-- 216

Query: 187 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
            +T  TRL+++  + +        IP  + +   +T+L LS N I+E+P  ++   +L  
Sbjct: 217 -LTNLTRLNLSYNQRT-------EIPEALAKLTNLTQLILSDNQIKEIPETIAKLTNLTH 268

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           LILS N+IK+ P+ I   L++L+ L LD N ++++P +    +  L  L L  N I  +P
Sbjct: 269 LILSGNQIKEIPETI-AKLTNLTQLGLDGNQIKEIP-EAIAKLTNLTQLGLDGNQIKEIP 326

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
           E    + L +L  L L   Q++E P  I +L  L  L LS N +  IPE    LT+LT+L
Sbjct: 327 E--AITKLTNLTHLILSGNQIKEIPETIAKLTNLTQLALSSNQITEIPEVLAQLTNLTQL 384

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            LS N I+ +P  L  L  +L  L L  N +  I   I
Sbjct: 385 FLSSNQITQIPEALAPL-TNLTTLHLRVNQITQIPEAI 421



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 139/286 (48%), Gaps = 24/286 (8%)

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LDLS   L+ LP EIGK+  L  L+L            V G      +  +  L  N   
Sbjct: 21  LDLSGQELTELPGEIGKLQQLESLIL---------GKQVGGYEKVGYRIFQKALGNN--- 68

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
              T   +L+++        ++L + G  L  IP  + +   + +L L R  + E+P  L
Sbjct: 69  -LKTLPIELLSLPNL-----RKLDISGNPLEGIPDVVMQILHLEELILIRVQLTEIPEAL 122

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +   +L  LILS N+I + P+A L  L++L+ L L  N + ++P +    +  L  L+LS
Sbjct: 123 AKLTNLTQLILSDNQITEIPEA-LAKLTNLTQLNLSYNQITEIP-EALAKLTNLTQLNLS 180

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
           YN I  +PE    + L +L +L LR  Q  E P  + +L  L  L+LS N    IPE   
Sbjct: 181 YNQITEIPE--ALAKLTNLTQLNLRGNQRTEIPEALAKLTNLTRLNLSYNQRTEIPEALA 238

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            LT+LT+L LSDN I  +P  +  L  +L  L L GN ++ I  TI
Sbjct: 239 KLTNLTQLILSDNQIKEIPETIAKL-TNLTHLILSGNQIKEIPETI 283



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 135/306 (44%), Gaps = 70/306 (22%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L++  N+ T +   L A  T LT+LI S N +  +PETI  L+ L  L L  N+I  
Sbjct: 220 LTRLNLSYNQRTEIPEAL-AKLTNLTQLILSDNQIKEIPETIAKLTNLTHLILSGNQIKE 278

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IP +I+   +L +  +  N +  +P  + KL+ L  L L  NQ+KE              
Sbjct: 279 IPETIAKLTNLTQLGLDGNQIKEIPEAIAKLTNLTQLGLDGNQIKE-------------- 324

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
                   +P  I K+T L  L+L+GN ++ +  ++                        
Sbjct: 325 --------IPEAITKLTNLTHLILSGNQIKEIPETIAK---------------------- 354

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                  +T  T+L+++S +       ++ IP  + +   +T+L LS N I ++P  L+ 
Sbjct: 355 -------LTNLTQLALSSNQ-------ITEIPEVLAQLTNLTQLFLSSNQITQIPEALAP 400

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             +L TL L  N+I   P+AI  SL  L  L L  NPL   P          +IL   Y 
Sbjct: 401 LTNLTTLHLRVNQITQIPEAI-ESLPKLELLDLRGNPLPISP----------EILGSVYQ 449

Query: 301 IASLPE 306
           + S+ E
Sbjct: 450 VGSVEE 455



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 22/190 (11%)

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSR------------------NKIKDWPDAILTS 264
           +LDLS   + ELP E+     L++LIL +                  N +K  P  +L S
Sbjct: 20  ELDLSGQELTELPGEIGKLQQLESLILGKQVGGYEKVGYRIFQKALGNNLKTLPIELL-S 78

Query: 265 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRM 324
           L +L  L +  NPL  +P    + + + +++ +   +  +PE    + L +L +L L   
Sbjct: 79  LPNLRKLDISGNPLEGIPDVVMQILHLEELILIRVQLTEIPE--ALAKLTNLTQLILSDN 136

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
           Q+ E P  + +L  L  L+LS N +  IPE    LT+LT+L+LS N I+ +P  L  L  
Sbjct: 137 QITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKL-T 195

Query: 385 SLQALRLDGN 394
           +L  L L GN
Sbjct: 196 NLTQLNLRGN 205


>gi|418740905|ref|ZP_13297281.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410751500|gb|EKR08477.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 400

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 172/355 (48%), Gaps = 43/355 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL + ++ ++P  I    +L    + NN L+ LP E+G+L  L  L+L +NQL     E
Sbjct: 51  LDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTLPEE 110

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+    L LS N L+ LP EIG++  LR+L L  N              P  +  L+
Sbjct: 111 IGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAF---------PKEIGQLK 161

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           +                            ++L+L    L  +P+EI +   + +L LS N
Sbjct: 162 NL---------------------------QQLNLYANQLKTLPNEIGQLQNLRELHLSYN 194

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            ++ L  E+    +LQ L L+ N++K  P  I   L +L  L L+NN  + VP +    +
Sbjct: 195 QLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEI-GQLKNLQVLDLNNNQFKTVPEE-IGQL 252

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ+LDL YN   ++ E      L +LQ L+L   QL+    +I +L+ L++L L+ N 
Sbjct: 253 KNLQVLDLGYNQFKTVSE--EIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQ 310

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L ++P   + L +L EL LS N +  L  E+G L+ +L+ L L  N L ++ + I
Sbjct: 311 LTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLK-NLKKLSLRDNQLTTLPKEI 364



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 161/377 (42%), Gaps = 64/377 (16%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+   KL  L    I     L  L  + N L  +P+ IG L  L  L+L  N++ ++P 
Sbjct: 51  LDLSEQKLKTLPKE-IGQLQNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTLPE 109

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +     +  N L+ LP E+G+L  L  L L++NQ   +  E  QL+ L  L+L 
Sbjct: 110 EIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLY 169

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L  LP EIG++  LR+L L+ N L+TL +                            
Sbjct: 170 ANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAE--------------------------- 202

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                I     L V    L L    L  +P EI +   +  LDL+ N  + +P E+    
Sbjct: 203 -----IGQLQNLQV----LDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLK 253

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           +LQ L L  N+ K   + I   L +L  L L+NN L+ + ++                  
Sbjct: 254 NLQVLDLGYNQFKTVSEEI-GQLKNLQMLFLNNNQLKTLSAE------------------ 294

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
                     L +LQ L L   QL   P +I +L+ LR L LS N L+++      L +L
Sbjct: 295 -------IGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNL 347

Query: 363 TELDLSDNNISALPPEL 379
            +L L DN ++ LP E+
Sbjct: 348 KKLSLRDNQLTTLPKEI 364



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 107/214 (50%), Gaps = 8/214 (3%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L    L  +P EI +   +  L+L+ N +  LP E+    +LQ L
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQWL 97

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL-DLSYNIASLPE 306
            L  N++   P+ I   L +   L L  N L  +P    K+I  L+ L +L  N      
Sbjct: 98  NLVTNQLTTLPEEI-GQLQNFQTLVLSKNRLTTLP----KEIGQLKNLRELYLNTNQFTA 152

Query: 307 NPP-FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
            P     L +LQ+L L   QL+  P +I +LQ LR L LS N L+++      L +L  L
Sbjct: 153 FPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVL 212

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           DL+DN +  LP E+G L+ +LQ L L+ N  +++
Sbjct: 213 DLNDNQLKTLPKEIGQLK-NLQVLDLNNNQFKTV 245


>gi|456864237|gb|EMF82646.1| leucine rich repeat protein [Leptospira weilii serovar Topaz str.
           LT2116]
          Length = 348

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 165/339 (48%), Gaps = 42/339 (12%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +PE IG+   L +L L  NR+ +IP  I    +L    +  N L  +P E+ +L  L
Sbjct: 29  LETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETLILAENILKTIPNEIEQLQNL 88

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
           GTLDL+ N+LK    E  +L  L  L+LS N L+ LPP IG++  L  L L  N L TL 
Sbjct: 89  GTLDLYENELKALPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELLRNQLATLP 148

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
             +V   +  +L      L ENE                               + ++P 
Sbjct: 149 EEIVGLKSLQILN-----LFENE-------------------------------IKSLPK 172

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           EI +   +  LDL +N I+ L  +     +L++L L  NK++++P A +  L SL  L L
Sbjct: 173 EISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFP-ADIVQLKSLEFLNL 231

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
           + N  + +P +  + +  LQ+L+L+ N + SLPE      L  L+ L+L   +L   P  
Sbjct: 232 NYNRFKILPEEILQ-LENLQVLELTGNQLTSLPEG--IGRLEKLESLFLEGNRLTTLPKG 288

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           I  L+ L+IL L QN L +IPE   +L +L EL L D N
Sbjct: 289 IGHLRGLKILRLEQNRLTAIPEEIGSLQNLKELYLQDFN 327



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 166/333 (49%), Gaps = 26/333 (7%)

Query: 99  LHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---RSS 155
           +HSN L++      ++R  +LD+S+  L  LP EIG    L KL+L GN L  +      
Sbjct: 5   IHSN-LEKSLQNPSEVR--ILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGK 61

Query: 156 LVNGPTPALLKYLRSRLPENEDSEAST------TKEDLITMATRLSVTS--KELSLEGMN 207
           L N  T  L + +   +P NE  +          + +L  +   +      KEL+L G  
Sbjct: 62  LRNLETLILAENILKTIP-NEIEQLQNLGTLDLYENELKALPNEIGKLENLKELNLSGNQ 120

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+ +P  I +   +  L+L RN +  LP E+    SLQ L L  N+IK  P  I + LS+
Sbjct: 121 LTVLPPSIGQLQNLEILELLRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEI-SQLSN 179

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L L  N ++++  D FK +  L+ L+L  N + + P +     L  L+ L L   + 
Sbjct: 180 LIWLDLGKNKIKRLSLD-FKRLQNLKSLNLLDNKLENFPAD--IVQLKSLEFLNLNYNRF 236

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
           +  P +IL+L+ L++L+L+ N L S+PEG   L  L  L L  N ++ LP  +G L   L
Sbjct: 237 KILPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIGHLR-GL 295

Query: 387 QALRLDGNPLRSIRRTILDRGTKAVLK--YLKD 417
           + LRL+ N L +I   I   G+   LK  YL+D
Sbjct: 296 KILRLEQNRLTAIPEEI---GSLQNLKELYLQD 325



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 149/324 (45%), Gaps = 43/324 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL + GN+LT +    I     L  LI ++N+L  +P  I  L  L  LDL++N + +
Sbjct: 42  LEKLILFGNRLTAIPKE-IGKLRNLETLILAENILKTIPNEIEQLQNLGTLDLYENELKA 100

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E  +  N L+ LP  +G+L  L  L+L  NQL     E   L+ L +L
Sbjct: 101 LPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELLRNQLATLPEEIVGLKSLQIL 160

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L  N +  LP EI +++ L  L L  N ++ L            L + R +        
Sbjct: 161 NLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLS-----------LDFKRLQ-------- 201

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              K L+L    L   P++I +   +  L+L+ N  + LP E+ 
Sbjct: 202 -----------------NLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEIL 244

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +LQ L L+ N++   P+ I   L  L  L L+ N L  +P  G   +  L+IL L  
Sbjct: 245 QLENLQVLELTGNQLTSLPEGI-GRLEKLESLFLEGNRLTTLPK-GIGHLRGLKILRLEQ 302

Query: 300 N-IASLPENPPFSSLPHLQELYLR 322
           N + ++PE     SL +L+ELYL+
Sbjct: 303 NRLTAIPE--EIGSLQNLKELYLQ 324



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 50/200 (25%)

Query: 220 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
           E+  LD+S   ++ LP E+ +  +L+ LIL  N++   P  I                  
Sbjct: 18  EVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEI------------------ 59

Query: 280 QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
                                            L +L+ L L    L+  P +I +LQ L
Sbjct: 60  -------------------------------GKLRNLETLILAENILKTIPNEIEQLQNL 88

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
             LDL +N L+++P     L +L EL+LS N ++ LPP +G L+ +L+ L L  N L ++
Sbjct: 89  GTLDLYENELKALPNEIGKLENLKELNLSGNQLTVLPPSIGQLQ-NLEILELLRNQLATL 147

Query: 400 RRTILDRGTKAVLKYLKDKI 419
              I+   +  +L   +++I
Sbjct: 148 PEEIVGLKSLQILNLFENEI 167


>gi|391343057|ref|XP_003745831.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Metaseiulus
           occidentalis]
          Length = 516

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 217/458 (47%), Gaps = 44/458 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L + GNKL+ L N  I     L  L  S+N L  +P+++ +L +L  LDL  N+   
Sbjct: 61  LVELYLYGNKLSTLPNE-IGGLVNLATLALSENSLTHLPDSLTNLKQLRVLDLRHNKFTE 119

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  I    SL   ++  N +  +  E+ +LS L  L L  N+++        L +L  L
Sbjct: 120 IPPVIYTLRSLTTLFLRFNRIREVSNEIAQLSNLTMLSLRENKIRMLPAGIGLLEQLVTL 179

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL---PEN- 175
           D SNN +  LPPEIGK   L  L +  N L  +  +L N  +   L    ++L   P++ 
Sbjct: 180 DASNNHMLHLPPEIGKCKNLSTLDVQHNELIDVPETLGNLKSLVRLGLRYNQLTSVPKSF 239

Query: 176 -----------EDSEASTTKEDLITMATRLS--------------------VTSKELSLE 204
                      E +  S   + L++  T+++                     +   ++ E
Sbjct: 240 AACALMQEFNVESNNISALPDGLLSSFTQMTSLTLSRNQFTSYPVGGPGQFTSVHSINFE 299

Query: 205 GMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
             ++S IP  ++  A  ++KL++  N +  LP ++ +  ++  L L+ N++   PD I  
Sbjct: 300 HNHISKIPFGMFSRAKNLSKLNMKDNQLSALPLDIGTWTNMVELNLATNQLVKIPDDI-Q 358

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
            L SL  L L NN LR++P      +  L++LDL  N +  LP    F  L  LQ+L ++
Sbjct: 359 YLHSLEVLVLSNNILRRLPGS-IGGLSKLRVLDLEENKLEQLPNEIGF--LHDLQKLMVQ 415

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
              L+  P  I  L  L  L++ +N++Q IPE    + +L  L L+DN + ALP EL L 
Sbjct: 416 NNLLQTLPRAIGHLTSLTYLNVGENNVQHIPEEIGTMEALESLYLNDNPLHALPFELALC 475

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
             +LQ + ++  PL  +   I+  G   V++YLK K P
Sbjct: 476 S-NLQIMSIENCPLSQMPAEIVIGGPSLVIQYLKMKGP 512



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 174/400 (43%), Gaps = 38/400 (9%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
           RLDL ++ I ++P+++     L E Y+  N LS LP E+G L  L TL L  N L     
Sbjct: 40  RLDLSRSNITALPANVKDLTHLVELYLYGNKLSTLPNEIGGLVNLATLALSENSLTHLPD 99

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
               L+ L VLDL +N  + +PP I  + +L  L L  N +R + + +       +L   
Sbjct: 100 SLTNLKQLRVLDLRHNKFTEIPPVIYTLRSLTTLFLRFNRIREVSNEIAQLSNLTMLSLR 159

Query: 169 RSR---LPEN-----EDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEA 218
            ++   LP       +      +   ++ +   +        L ++   L  +P  +   
Sbjct: 160 ENKIRMLPAGIGLLEQLVTLDASNNHMLHLPPEIGKCKNLSTLDVQHNELIDVPETLGNL 219

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
             + +L L  N +  +P   ++CA +Q   +  N I   PD +L+S + ++ L L  N  
Sbjct: 220 KSLVRLGLRYNQLTSVPKSFAACALMQEFNVESNNISALPDGLLSSFTQMTSLTLSRNQF 279

Query: 279 RQVPSDGFKDIPMLQILDLSYN-IASLP---------------ENPPFSSLP-------H 315
              P  G      +  ++  +N I+ +P               ++   S+LP       +
Sbjct: 280 TSYPVGGPGQFTSVHSINFEHNHISKIPFGMFSRAKNLSKLNMKDNQLSALPLDIGTWTN 339

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           + EL L   QL + P DI  L  L +L LS N L+ +P     L+ L  LDL +N +  L
Sbjct: 340 MVELNLATNQLVKIPDDIQYLHSLEVLVLSNNILRRLPGSIGGLSKLRVLDLEENKLEQL 399

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           P E+G L   LQ L +  N L+++ R I   G    L YL
Sbjct: 400 PNEIGFLH-DLQKLMVQNNLLQTLPRAI---GHLTSLTYL 435


>gi|456891504|gb|EMG02215.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 402

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 177/362 (48%), Gaps = 41/362 (11%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P+ IG L  L  L+L++N++ ++P+ I    +L    +  N  +ALP ++GKL  L
Sbjct: 54  LTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQFTALPNDIGKLKNL 113

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L L  NQL  +  +  QL+ L  L LS N L+ LP +IG++  L+ L L  N L TL 
Sbjct: 114 QELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGQLQNLQVLDLEHNQLTTLP 173

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
           + +  G    L      RL   E+   + +KE  I     L V    L L G  L+ +P 
Sbjct: 174 NDI--GKLQKL-----ERLSLIENQLKTLSKE--IGYLKELQV----LDLNGNQLTTLPK 220

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           EI E   + +L L +N ++ LP ++    +LQ L +  N++K  P  I   L +L  L L
Sbjct: 221 EIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEI-GELQNLQELYL 279

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
             N L+ +P +   ++  L +LDL  N                        +L+  P +I
Sbjct: 280 YTNQLKTLPKE-IGELQNLTVLDLHIN------------------------ELKTLPKEI 314

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
             LQ L +LDL  N L+++P+    L SLT LDL +N +  LP E+G L+  L+ L LD 
Sbjct: 315 GELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKLK-ELRKLHLDD 373

Query: 394 NP 395
            P
Sbjct: 374 IP 375



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 135/279 (48%), Gaps = 20/279 (7%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N+ T L N+ I     L EL  S N L   P  IG L  L  L L  N++ ++P+ I   
Sbjct: 98  NQFTALPND-IGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGQL 156

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 127
            +L    + +N L+ LP ++GKL KL  L L  NQLK    E   L+ L VLDL+ N L+
Sbjct: 157 QNLQVLDLEHNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLT 216

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            LP EIG++  LR+L L  N L+TL + +        LK L+                 L
Sbjct: 217 TLPKEIGELKNLRELHLYKNQLKTLPNDI------GELKNLQV---------LHIGSNQL 261

Query: 188 ITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 245
            T+   +      +EL L    L  +P EI E   +T LDL  N ++ LP E+    +L 
Sbjct: 262 KTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLT 321

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
            L L  N++K  P  I   L SL+ L L NN L+ +P++
Sbjct: 322 VLDLRNNELKTLPKEI-GELQSLTVLDLRNNELKTLPNE 359



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 155/367 (42%), Gaps = 64/367 (17%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++  N+LT L N  I     L  L   KN    +P  IG L  L  L L  N++ + P+
Sbjct: 70  LNLYRNQLTTLPNE-IGKLQNLQLLNLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPN 128

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I    +L E ++  N L+ LP ++G+L  L  LDL  NQL     +  +L +L  L L 
Sbjct: 129 DIGQLQNLRELHLSVNQLTTLPNDIGQLQNLQVLDLEHNQLTTLPNDIGKLQKLERLSLI 188

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L  L  EIG +  L+ L L GN L TL   +        LK LR             
Sbjct: 189 ENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKEI------GELKNLR------------- 229

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                            EL L    L  +P++I E   +  L +  N ++ LP E+    
Sbjct: 230 -----------------ELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQ 272

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           +LQ L L  N++K  P  I   L +L+ L L  N L+ +P +   ++  L +LDL     
Sbjct: 273 NLQELYLYTNQLKTLPKEI-GELQNLTVLDLHINELKTLPKE-IGELQNLTVLDL----- 325

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
                              R  +L+  P +I  LQ L +LDL  N L+++P     L  L
Sbjct: 326 -------------------RNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKLKEL 366

Query: 363 TELDLSD 369
            +L L D
Sbjct: 367 RKLHLDD 373



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 162/328 (49%), Gaps = 34/328 (10%)

Query: 91  LSKLGTL---------DLHSNQLKEY--CVEACQ--LRLSVLDLSNNSLSGLPPEIGKMT 137
           L K+GTL          L + ++  Y    EA Q    + +LDLSN  L+ LP EIG++ 
Sbjct: 6   LQKIGTLILILLCFLSQLKAQEIGTYHNLTEALQNPTDVRILDLSNKRLTTLPKEIGELQ 65

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            LR L L  N L TL         P  +  L++    N D    T   + I     L   
Sbjct: 66  NLRILNLYRNQLTTL---------PNEIGKLQNLQLLNLDKNQFTALPNDIGKLKNL--- 113

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    L+  P++I +   + +L LS N +  LP ++    +LQ L L  N++   
Sbjct: 114 -QELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGQLQNLQVLDLEHNQLTTL 172

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSD-GFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
           P+ I   L  L  L L  N L+ +  + G+  +  LQ+LDL+ N + +LP+      L +
Sbjct: 173 PNDI-GKLQKLERLSLIENQLKTLSKEIGY--LKELQVLDLNGNQLTTLPK--EIGELKN 227

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           L+EL+L + QL+  P DI  L+ L++L +  N L+++P+    L +L EL L  N +  L
Sbjct: 228 LRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQLKTL 287

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P E+G L+ +L  L L  N L+++ + I
Sbjct: 288 PKEIGELQ-NLTVLDLHINELKTLPKEI 314


>gi|359726824|ref|ZP_09265520.1| leucine-rich repeat-containing protein [Leptospira weilii str.
           2006001855]
          Length = 348

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 183/343 (53%), Gaps = 19/343 (5%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S ++ N + +++ + S +  LD+    + ++P  I    +L +  +  N L+A+P E+GK
Sbjct: 2   SHSIHNNLEKSLQNPSEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGK 61

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L TL L  N+LK    E  QL+ L+ LDL  N L  LP EIGK+  L++L L+GN L
Sbjct: 62  LRNLETLILAENRLKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQL 121

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
             L  S+       +L+  R++L        +T  E+++ + + L +    L+L    + 
Sbjct: 122 TVLPPSIGQLQNLEILELFRNQL--------ATLPEEIVGLKS-LQI----LNLFENEIK 168

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
           ++P EI +   +  LDL +N I+ L  +     +L++L L  NK++++P A +  L SL 
Sbjct: 169 SLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFP-ADIVQLKSLE 227

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
            L L+ N  + +P +  + +  LQ+L+L+ N + SLPE      L  L+ L+L   +L  
Sbjct: 228 FLNLNYNRFKILPEEILQ-LENLQVLELTGNQLTSLPEG--IGRLEKLESLFLEGNRLTT 284

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
            P  I  L+ L+I+ L QN L +IPE   +L +L EL L D N
Sbjct: 285 LPKGIEHLRSLKIVHLEQNRLTAIPEEIGSLQNLKELYLQDFN 327



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 33/186 (17%)

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L V+S+EL         +P EI     + KL L  N +  +P E+    +L+TLIL+ N+
Sbjct: 22  LDVSSQELE-------TLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETLILAENR 74

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 313
           +K  P+ I   L +L+ L L  N L+ +P++                            L
Sbjct: 75  LKTIPNEI-EQLQNLATLDLYENKLKVLPNE-------------------------IGKL 108

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
            +L+EL L   QL   P  I +LQ L IL+L +N L ++PE    L SL  L+L +N I 
Sbjct: 109 ENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIK 168

Query: 374 ALPPEL 379
           +LP E+
Sbjct: 169 SLPKEI 174



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 50/200 (25%)

Query: 220 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
           E+  LD+S   ++ LP E+ +  +L+ LIL  N++   P  I                  
Sbjct: 18  EVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEI------------------ 59

Query: 280 QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
                                            L +L+ L L   +L+  P +I +LQ L
Sbjct: 60  -------------------------------GKLRNLETLILAENRLKTIPNEIEQLQNL 88

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
             LDL +N L+ +P     L +L EL+LS N ++ LPP +G L+ +L+ L L  N L ++
Sbjct: 89  ATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPPSIGQLQ-NLEILELFRNQLATL 147

Query: 400 RRTILDRGTKAVLKYLKDKI 419
              I+   +  +L   +++I
Sbjct: 148 PEEIVGLKSLQILNLFENEI 167


>gi|307200860|gb|EFN80906.1| Leucine-rich repeat-containing protein 40 [Harpegnathos saltator]
          Length = 352

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 193/382 (50%), Gaps = 47/382 (12%)

Query: 53  LHQNRILSIPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEA 111
           LH N +   P  ISGC +L   ++ NN +S + P  L  +  L    L +NQ++    E 
Sbjct: 3   LHSNNLKEFPD-ISGCSALTVLHLDNNNISEIVPEYLDGVGNLTKFTLQNNQIEMIPEEI 61

Query: 112 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 170
            +L  L V DLS+N++S +P  IG +  L++ ++ GN ++ +R  ++   TP +L ++R 
Sbjct: 62  IKLINLQVFDLSHNNISLIPFCIGILPNLKQFIIKGNNIKNIRGDIIRCGTPRILAHIR- 120

Query: 171 RLPENEDSEASTTKEDLITMAT------RLSVTSKELSLEGMNLSAIPSEIW-EAGE--I 221
              +  DS    TK  L   +        +   +K LSL G NL   P E+  +A E  +
Sbjct: 121 ---QTTDSTNVNTKVLLPCASVSKFPDKYMMKNTKLLSLSGQNLLEFPEEVLIDAVEAAV 177

Query: 222 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
           T +DLSRN + EL  E++   ++  L L+ N +   P+ I      L  L +  N L  +
Sbjct: 178 TVVDLSRNKLSELLVEMAQLVTVTDLKLTSNLLTHLPEWIGEKYKYLQALDISKNYLESL 237

Query: 282 P-SDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
           P S G   +  L+ +DLS+N                     R ++L EA  +++ L+ L 
Sbjct: 238 PLSIGC--LKYLRDIDLSFN---------------------RFIELPEAIYNVMSLESLI 274

Query: 341 ILD--LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
             D  + + ++ S+ +    L  L  L+L++NNI+ +PPELG L+ +L+ L L GN  + 
Sbjct: 275 ANDNLIGEINVSSLGK----LKKLAILNLANNNIAHVPPELGNLK-NLRNLSLSGNCFKY 329

Query: 399 IRRTILDRGTKAVLKYLKDKIP 420
            R+ IL + T+ +L+YL++ IP
Sbjct: 330 PRQAILMKDTEEILRYLRNLIP 351



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 23/174 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L +  N LT L   +   +  L  L  SKN L  +P +IG L  L  +DL  NR + 
Sbjct: 200 VTDLKLTSNLLTHLPEWIGEKYKYLQALDISKNYLESLPLSIGCLKYLRDIDLSFNRFIE 259

Query: 61  IPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 119
           +P +I    SL      +N +  +  + LGKL KL                      ++L
Sbjct: 260 LPEAIYNVMSLESLIANDNLIGEINVSSLGKLKKL----------------------AIL 297

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           +L+NN+++ +PPE+G +  LR L L+GN  +  R +++   T  +L+YLR+ +P
Sbjct: 298 NLANNNIAHVPPELGNLKNLRNLSLSGNCFKYPRQAILMKDTEEILRYLRNLIP 351


>gi|440798242|gb|ELR19310.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 641

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 177/367 (48%), Gaps = 47/367 (12%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ IG L+ L  L+L+ N++ ++P +I    +L    +  N++S LP ELGKL  L  L
Sbjct: 219 LPDKIGLLTNLKILNLYDNKLTALPPAIGKLTNLTALGLNENSISTLPPELGKLKNLQML 278

Query: 98  DLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
           DL  N+L     E   L   VLDL +NS+S     + K+  L  L +  N L TL   L 
Sbjct: 279 DLRFNKLTAIPPEIGNL---VLDLQHNSISSFAS-VAKLEKLENLDIQYNNLETLPQGL- 333

Query: 158 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 217
                +L    R  L  N   E      DL  +        +EL LEG  L+ +P+EI +
Sbjct: 334 ----GSLKSLKRLHLKYNHIKELPREIGDLDKL--------EELDLEGNRLTGLPTEISK 381

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              + K+ LSRN + ELP EL    SL+ L L+ N+        LT+L S+  L      
Sbjct: 382 LKNLHKIYLSRNMLAELPDELGQLKSLEELFLNDNQ--------LTNLGSVVML------ 427

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
                       P L++LD+S N +  L   P  + L +L EL+    +L     +I +L
Sbjct: 428 ------------PGLRVLDISSNELTKL--TPSIAMLTNLHELHASANELTNLVPEIGQL 473

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
             LR+LD + N L S+P    NLTSL +L+L  N +  LPPE+G L   L  L L+ N L
Sbjct: 474 VNLRLLDFNDNMLNSLPAEIGNLTSLKKLNLGGNLLKELPPEIGKL-TGLSCLLLNYNKL 532

Query: 397 RSIRRTI 403
            ++   I
Sbjct: 533 TTLTSQI 539



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 173/421 (41%), Gaps = 100/421 (23%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD++ N L  L   L  S   L  L    N +  +P  IG L +L  LDL  NR+  
Sbjct: 316 LENLDIQYNNLETLPQGL-GSLKSLKRLHLKYNHIKELPREIGDLDKLEELDLEGNRLTG 374

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P+ IS   +L + Y+  N L+ LP ELG+L  L  L L+ NQL           L VLD
Sbjct: 375 LPTEISKLKNLHKIYLSRNMLAELPDELGQLKSLEELFLNDNQLTNLGSVVMLPGLRVLD 434

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           +S+N L+ L P I  +T L +L  + N L  L         P + + +  RL +  D+  
Sbjct: 435 ISSNELTKLTPSIAMLTNLHELHASANELTNL--------VPEIGQLVNLRLLDFNDNM- 485

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                                      L+++P+EI     + KL+L  N ++ELPPE+  
Sbjct: 486 ---------------------------LNSLPAEIGNLTSLKKLNLGGNLLKELPPEIGK 518

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
              L  L+L+ NK+      I  SL SL+ L LD N L ++P                  
Sbjct: 519 LTGLSCLLLNYNKLTTLTSQI-GSLLSLTELNLDENKLTELP------------------ 559

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
                                         T++  ++ L +L  + N +  +P+   NL 
Sbjct: 560 ------------------------------TEMGSMKGLEVLTFNDNDINDLPDTLYNLD 589

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           +L+            P  L L    ++   +D NPL  I + I + G++AV  YL D++ 
Sbjct: 590 NLSS-----------PLWLFL---RIRLFGMDDNPLEDIPQEITEGGSQAVFNYLGDRLQ 635

Query: 421 E 421
           E
Sbjct: 636 E 636



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 93/209 (44%), Gaps = 35/209 (16%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+LT L+ + IA  T L EL AS N L  +   IG L  L  LD + N + S+P+
Sbjct: 433 LDISSNELTKLTPS-IAMLTNLHELHASANELTNLVPEIGQLVNLRLLDFNDNMLNSLPA 491

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLS 122
            I    SL +  +G N L  LP E+GKL+ L  L L+ N+L     +    L L+ L+L 
Sbjct: 492 EIGNLTSLKKLNLGGNLLKELPPEIGKLTGLSCLLLNYNKLTTLTSQIGSLLSLTELNLD 551

Query: 123 NNSLSGLPPEIGKMTTL---------------------------------RKLLLTGNPL 149
            N L+ LP E+G M  L                                 R   +  NPL
Sbjct: 552 ENKLTELPTEMGSMKGLEVLTFNDNDINDLPDTLYNLDNLSSPLWLFLRIRLFGMDDNPL 611

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDS 178
             +   +  G + A+  YL  RL E+ +S
Sbjct: 612 EDIPQEITEGGSQAVFNYLGDRLQESLES 640


>gi|255079004|ref|XP_002503082.1| predicted protein [Micromonas sp. RCC299]
 gi|226518348|gb|ACO64340.1| predicted protein [Micromonas sp. RCC299]
          Length = 333

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 176/353 (49%), Gaps = 44/353 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S L + GN L  L +  I   T L  L  + N L  +PE +G L+ LI LDL  N++ S
Sbjct: 21  LSTLRLTGNMLFTLPSE-IGFLTSLKILKLNDNRLRSLPEEVGFLASLILLDLSGNQLTS 79

Query: 61  IPSSISGCCSLAEFYMGNNALS---ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 116
           + + ++   SL   ++GNN LS   +LPAE+G+L+ L  L L +N+L +   E  QL RL
Sbjct: 80  LNAELARLKSLGYLHVGNNQLSSLTSLPAEIGQLTSLTELYLDNNKLTDLPAEIVQLERL 139

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 176
           + L+L NN L+ LPPEIG+   L +L L+ N L TL + +    T  LL         N 
Sbjct: 140 NRLNLDNNKLTTLPPEIGQFRDLGELTLSHNQLTTLPAEIGQIYTLGLL---------NL 190

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
           D+   T+    + +    +   ++L L G  L+ +P++I +  ++  LDLSRN +  LP 
Sbjct: 191 DNNQLTS----LPLENWPATYLEKLHLSGNKLTTLPAKIGQFKDLWLLDLSRNQLTTLPA 246

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    SLQ L L  NK+   P  I   L+SL  L L  N L  +P++    +  L++LD
Sbjct: 247 EIGQLTSLQVLRLLVNKLTSLPAEI-GQLASLRKLYLSWNELTSLPAE-IGQLTSLEMLD 304

Query: 297 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
           L YN                        QL   P +I +L  L +L L +N L
Sbjct: 305 LQYN------------------------QLTSVPDEIGQLTSLELLGLGENQL 333



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 124/374 (33%), Positives = 175/374 (46%), Gaps = 60/374 (16%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  IG LS L  L L  N + ++PS I    SL    + +N L +LP E+G L+ L
Sbjct: 8   LKSLPAEIGQLSDLSTLRLTGNMLFTLPSEIGFLTSLKILKLNDNRLRSLPEEVGFLASL 67

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNN---SLSGLPPEIGKMTTLRKLLLTGNPLR 150
             LDL  NQL     E  +L+ L  L + NN   SL+ LP EIG++T+L +L L  N L 
Sbjct: 68  ILLDLSGNQLTSLNAELARLKSLGYLHVGNNQLSSLTSLPAEIGQLTSLTELYLDNNKLT 127

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
            L + +V                                   RL+     L+L+   L+ 
Sbjct: 128 DLPAEIVQ--------------------------------LERLN----RLNLDNNKLTT 151

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI-----KDWPDAILTSL 265
           +P EI +  ++ +L LS N +  LP E+    +L  L L  N++     ++WP       
Sbjct: 152 LPPEIGQFRDLGELTLSHNQLTTLPAEIGQIYTLGLLNLDNNQLTSLPLENWPA------ 205

Query: 266 SSLSCLKLDNNPLRQVPS--DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
           + L  L L  N L  +P+    FKD   L +LDLS N + +LP       L  LQ L L 
Sbjct: 206 TYLEKLHLSGNKLTTLPAKIGQFKD---LWLLDLSRNQLTTLP--AEIGQLTSLQVLRLL 260

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
             +L   P +I +L  LR L LS N L S+P     LTSL  LDL  N ++++P E+G L
Sbjct: 261 VNKLTSLPAEIGQLASLRKLYLSWNELTSLPAEIGQLTSLEMLDLQYNQLTSVPDEIGQL 320

Query: 383 EPSLQALRLDGNPL 396
             SL+ L L  N L
Sbjct: 321 -TSLELLGLGENQL 333



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 149/300 (49%), Gaps = 29/300 (9%)

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPEN 175
           LDLS   L  LP EIG+++ L  L LTGN L TL S +    +  +LK   +R   LPE 
Sbjct: 1   LDLSYCGLKSLPAEIGQLSDLSTLRLTGNMLFTLPSEIGFLTSLKILKLNDNRLRSLPEE 60

Query: 176 EDSEASTTKEDL--------------ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 221
               AS    DL              +     L V + +LS    +L+++P+EI +   +
Sbjct: 61  VGFLASLILLDLSGNQLTSLNAELARLKSLGYLHVGNNQLS----SLTSLPAEIGQLTSL 116

Query: 222 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
           T+L L  N + +LP E+     L  L L  NK+   P  I      L  L L +N L  +
Sbjct: 117 TELYLDNNKLTDLPAEIVQLERLNRLNLDNNKLTTLPPEI-GQFRDLGELTLSHNQLTTL 175

Query: 282 PSDGFKDIPMLQILDLSYN-IASLP-ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
           P++    I  L +L+L  N + SLP EN P +   +L++L+L   +L   P  I + + L
Sbjct: 176 PAE-IGQIYTLGLLNLDNNQLTSLPLENWPAT---YLEKLHLSGNKLTTLPAKIGQFKDL 231

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            +LDLS+N L ++P     LTSL  L L  N +++LP E+G L  SL+ L L  N L S+
Sbjct: 232 WLLDLSRNQLTTLPAEIGQLTSLQVLRLLVNKLTSLPAEIGQL-ASLRKLYLSWNELTSL 290


>gi|410940039|ref|ZP_11371859.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410784848|gb|EKR73819.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 473

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 180/400 (45%), Gaps = 50/400 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++  N+L  L    I     L EL   KN L  +P+ IG L  L +++L  NR+++
Sbjct: 98  LEYLNLSNNRLVTLPQE-IGQLQKLKELSLEKNQLTTLPKEIGRLQNLQKINLSNNRLVT 156

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I     L E Y+  N L+ LP E+GKL KL  L +  NQL     E  QL+ L  L
Sbjct: 157 LPREIGKLQKLKELYLEKNQLTTLPKEIGKLKKLKNLYICDNQLTILPEEVIQLQELEEL 216

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L NN L+ LP +IG++  L+ L L+ N    L   +              +L E E   
Sbjct: 217 SLDNNQLATLPKKIGRLQKLKLLFLSDNQFVILPKEI-------------GQLQELE--- 260

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                LSL+   L+ +P  I +  ++  L LS N     P  + 
Sbjct: 261 --------------------HLSLDDNQLATLPKGIGKLQKLENLSLSNNRFVVFPKAIG 300

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL-DLS 298
               L+ L LS N++    +  L  L  L  L L++N     P    K++  LQ L DL 
Sbjct: 301 RLQKLKALYLSDNQLAILSEQSL-HLQKLEYLHLNHNRFTTFP----KEVQQLQNLKDLH 355

Query: 299 YN---IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
            N      LP+      L  L+ L+L   QL   P  I +LQ+L+ L L  N L  +P+G
Sbjct: 356 LNGNQFTILPQG--IGQLQKLEYLFLDNNQLTILPQGIGKLQKLKELSLDNNQLTILPKG 413

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
              L  L  L+LS+N ++ LP E+  L+ +L  L L+G P
Sbjct: 414 IGKLQKLEYLNLSNNQLTTLPKEIRKLQ-NLHFLGLEGMP 452



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 121/387 (31%), Positives = 176/387 (45%), Gaps = 29/387 (7%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P+ I  L  L  L L    + ++P  I     L    + NN L  LP E+G+L KL
Sbjct: 62  LTTLPKEIEQLQNLESLRLDGENLTTLPKEIGRLQKLEYLNLSNNRLVTLPQEIGQLQKL 121

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L L  NQL     E  +L+ L  ++LSNN L  LP EIGK+  L++L L  N L TL 
Sbjct: 122 KELSLEKNQLTTLPKEIGRLQNLQKINLSNNRLVTLPREIGKLQKLKELYLEKNQLTTLP 181

Query: 154 SSLVNGPTPALLKYLR---------SRLPE-----NEDSEASTTKEDLITMATRLSVTS- 198
             +        LK L+         + LPE      E  E S     L T+  ++     
Sbjct: 182 KEI------GKLKKLKNLYICDNQLTILPEEVIQLQELEELSLDNNQLATLPKKIGRLQK 235

Query: 199 -KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            K L L       +P EI +  E+  L L  N +  LP  +     L+ L LS N+   +
Sbjct: 236 LKLLFLSDNQFVILPKEIGQLQELEHLSLDDNQLATLPKGIGKLQKLENLSLSNNRFVVF 295

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P AI   L  L  L L +N L  + S+    +  L+ L L++N   + P+      L +L
Sbjct: 296 PKAI-GRLQKLKALYLSDNQLA-ILSEQSLHLQKLEYLHLNHNRFTTFPK--EVQQLQNL 351

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           ++L+L   Q    P  I +LQ+L  L L  N L  +P+G   L  L EL L +N ++ LP
Sbjct: 352 KDLHLNGNQFTILPQGIGQLQKLEYLFLDNNQLTILPQGIGKLQKLKELSLDNNQLTILP 411

Query: 377 PELGLLEPSLQALRLDGNPLRSIRRTI 403
             +G L+  L+ L L  N L ++ + I
Sbjct: 412 KGIGKLQ-KLEYLNLSNNQLTTLPKEI 437



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 170/370 (45%), Gaps = 29/370 (7%)

Query: 48  LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 107
           ++ L+L+ +++ ++P  I    +L    +    L+ LP E+G+L KL  L+L +N+L   
Sbjct: 52  VLALELYDSQLTTLPKEIEQLQNLESLRLDGENLTTLPKEIGRLQKLEYLNLSNNRLVTL 111

Query: 108 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
             E  QL +L  L L  N L+ LP EIG++  L+K+ L+ N L TL   +  G    L  
Sbjct: 112 PQEIGQLQKLKELSLEKNQLTTLPKEIGRLQNLQKINLSNNRLVTLPREI--GKLQKL-- 167

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKL 224
                       E    K  L T+   +      K L +    L+ +P E+ +  E+ +L
Sbjct: 168 -----------KELYLEKNQLTTLPKEIGKLKKLKNLYICDNQLTILPEEVIQLQELEEL 216

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
            L  N +  LP ++     L+ L LS N+    P  I   L  L  L LD+N L  +P  
Sbjct: 217 SLDNNQLATLPKKIGRLQKLKLLFLSDNQFVILPKEI-GQLQELEHLSLDDNQLATLPK- 274

Query: 285 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
           G   +  L+ L LS N     P+      L  L+ LYL   QL       L LQ+L  L 
Sbjct: 275 GIGKLQKLENLSLSNNRFVVFPK--AIGRLQKLKALYLSDNQLAILSEQSLHLQKLEYLH 332

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L+ N   + P+  + L +L +L L+ N  + LP  +G L+  L+ L LD N L     TI
Sbjct: 333 LNHNRFTTFPKEVQQLQNLKDLHLNGNQFTILPQGIGQLQ-KLEYLFLDNNQL-----TI 386

Query: 404 LDRGTKAVLK 413
           L +G   + K
Sbjct: 387 LPQGIGKLQK 396



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 5/116 (4%)

Query: 288 DIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           D+  L++ D    + +LP+      L +L+ L L    L   P +I RLQ+L  L+LS N
Sbjct: 51  DVLALELYD--SQLTTLPK--EIEQLQNLESLRLDGENLTTLPKEIGRLQKLEYLNLSNN 106

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            L ++P+    L  L EL L  N ++ LP E+G L+ +LQ + L  N L ++ R I
Sbjct: 107 RLVTLPQEIGQLQKLKELSLEKNQLTTLPKEIGRLQ-NLQKINLSNNRLVTLPREI 161


>gi|418727611|ref|ZP_13286199.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958969|gb|EKO22746.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 379

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 167/350 (47%), Gaps = 43/350 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 166

Query: 170 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 167 SLNLSYNQIKTIPKKIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 218

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  + S   + 
Sbjct: 219 NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTL-SKEIEQ 276

Query: 289 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
           +  L+ LDL  N                        QL   P +I +L+ L++LDL  N 
Sbjct: 277 LQNLKSLDLGSN------------------------QLTTFPKEIGQLKNLQVLDLGSNQ 312

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L ++PEG   L +L  LDL  N ++ LP E+G L+ +LQ L L+ N L S
Sbjct: 313 LTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQ-NLQELFLNNNQLSS 361



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 157/327 (48%), Gaps = 24/327 (7%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+   L    I     L EL  +KN L  +P+ IG L  L +L+L  N+I +IP 
Sbjct: 53  LDLSANRFKTLPKE-IGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L   Y+ NN L+ LP E+G+L KL  L L  NQL     E  QL+ L  L+LS
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N +  +P +I K+  L+ L L  N L TL   +              +L   +  + ST
Sbjct: 172 YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEI-------------GQLQNLQSLDLST 218

Query: 183 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
            +  L T+   +      ++L L    L+ +P+EI +   +  L+L  N +  L  E+  
Sbjct: 219 NR--LTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQ 276

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             +L++L L  N++  +P  I   L +L  L L +N L  +P +G   +  LQ LDL  N
Sbjct: 277 LQNLKSLDLGSNQLTTFPKEI-GQLKNLQVLDLGSNQLTTLP-EGIGQLKNLQTLDLDSN 334

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQL 326
            + +LP+      L +LQEL+L   QL
Sbjct: 335 QLTTLPQ--EIGQLQNLQELFLNNNQL 359



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ +
Sbjct: 280 LKSLDLGSNQLTTFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTT 338

Query: 61  IPSSISGCCSLAEFYMGNNALSA 83
           +P  I    +L E ++ NN LS+
Sbjct: 339 LPQEIGQLQNLQELFLNNNQLSS 361


>gi|358334309|dbj|GAA52735.1| leucine-rich repeat-containing protein 40 [Clonorchis sinensis]
          Length = 564

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 206/425 (48%), Gaps = 60/425 (14%)

Query: 46  SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 105
           S L+ L++  NR+ ++P  ++G  +L E ++ +N +  L     +   L TLDL  N ++
Sbjct: 152 SPLVTLNVSLNRLTAVPD-VAGLTNLKELFLSDNRICTLSFASFRDCPLVTLDLARNCIE 210

Query: 106 EY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 163
           +    + +    L  LD+S N L+ LP E+G M +L+ LL+  NPLR++R ++V+G T A
Sbjct: 211 QIPQGISSTLPHLMRLDVSANELTNLPTELGLMQSLQVLLVERNPLRSIRQNVVSGGTNA 270

Query: 164 LLKYLRSR-LPENEDS--EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 220
           + + LR R +  +ED+  ++ST +   +T  T +   ++  +++G     + + +  +G+
Sbjct: 271 IKELLRQRHVSTSEDAAPDSSTPQSVQVTDPTPVPEQARHSNVKG----DVAASVGCSGK 326

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK----------DWPDAILTSLSSLSC 270
               D    ++  +PP ++    LQ     +   +           W DA  +  +++  
Sbjct: 327 TGAAD---TALPRVPP-VNPAGVLQWSAAPKGSPELSLPELDVEAAWIDASASGSTAVRS 382

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 329
           L+L+   L+  P   F     L IL+LS N I  LP+      L  L EL L R  LR  
Sbjct: 383 LQLEQRMLQAFPRGIFGFASTLTILNLSVNRITQLPDE--IDRLVKLVELSLTRNLLRTL 440

Query: 330 PTDILRLQQLRILDLSQNSLQ-SIPEGF-------------------------------K 357
           P  + RL +L +L L  N L   +PE                                  
Sbjct: 441 PISMARLPELAVLCLDSNPLGPELPEAAIFSPPLSCSIQSLSLHSCKLSRVPSANLLQPS 500

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           N   LT LDLSDN+I  +PPELGL    L++L+L GN  R  R  ++ +GT AVL+YL+ 
Sbjct: 501 NAPKLTHLDLSDNDIDTIPPELGLCT-QLRSLQLTGNTFRIPRPGVIAQGTSAVLEYLRS 559

Query: 418 KIPEN 422
           +IPE+
Sbjct: 560 RIPES 564



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 94/209 (44%), Gaps = 38/209 (18%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRIL 59
           + +LDVE   +   ++   A  ++  E    + +L   P  I G  S L  L+L  NRI 
Sbjct: 360 LPELDVEAAWIDASASGSTAVRSLQLE----QRMLQAFPRGIFGFASTLTILNLSVNRIT 415

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA-------- 111
            +P  I     L E  +  N L  LP  + +L +L  L L SN L     EA        
Sbjct: 416 QLPDEIDRLVKLVELSLTRNLLRTLPISMARLPELAVLCLDSNPLGPELPEAAIFSPPLS 475

Query: 112 ----------CQL---------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 146
                     C+L               +L+ LDLS+N +  +PPE+G  T LR L LTG
Sbjct: 476 CSIQSLSLHSCKLSRVPSANLLQPSNAPKLTHLDLSDNDIDTIPPELGLCTQLRSLQLTG 535

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           N  R  R  ++   T A+L+YLRSR+PE+
Sbjct: 536 NTFRIPRPGVIAQGTSAVLEYLRSRIPES 564



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 113/256 (44%), Gaps = 50/256 (19%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           NKLT L + L     +++  +A+  L +   ++   L+ L +LD  +NR+    S++S  
Sbjct: 43  NKLTFLPDELGRLHELVSLDVANNQLESLNDQSFAQLTSLEKLDASENRL----STVSVL 98

Query: 69  -CSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVE------ACQLRLSVLD 120
              L +  +G+N L  +P   L KL KL +LDL SNQL    ++           L  L+
Sbjct: 99  PPRLRQINLGHNRLEHIPTGLLEKLLKLQSLDLQSNQLTALVLDNRNPSARSGSPLVTLN 158

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           +S N L+ + P++  +T L++L L+ N + TL                         S A
Sbjct: 159 VSLNRLTAV-PDVAGLTNLKELFLSDNRICTL-------------------------SFA 192

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPELS 239
           S     L+T           L L    +  IP  I      + +LD+S N +  LP EL 
Sbjct: 193 SFRDCPLVT-----------LDLARNCIEQIPQGISSTLPHLMRLDVSANELTNLPTELG 241

Query: 240 SCASLQTLILSRNKIK 255
              SLQ L++ RN ++
Sbjct: 242 LMQSLQVLLVERNPLR 257



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 36/228 (15%)

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEA-CQL-RLSVLDLSNNSLSG---LPPEI 133
           N L+ LP ELG+L +L +LD+ +NQL+    ++  QL  L  LD S N LS    LPP  
Sbjct: 43  NKLTFLPDELGRLHELVSLDVANNQLESLNDQSFAQLTSLEKLDASENRLSTVSVLPPR- 101

Query: 134 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE--------DSEASTTKE 185
                LR++ L  N L  + + L+      LLK     L  N+         + ++ +  
Sbjct: 102 -----LRQINLGHNRLEHIPTGLLE----KLLKLQSLDLQSNQLTALVLDNRNPSARSGS 152

Query: 186 DLITMATRLSVTS-----------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
            L+T+   L+  +           KEL L    +  +    +    +  LDL+RN I+++
Sbjct: 153 PLVTLNVSLNRLTAVPDVAGLTNLKELFLSDNRICTLSFASFRDCPLVTLDLARNCIEQI 212

Query: 235 PPELSSC-ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
           P  +SS    L  L +S N++ + P   L  + SL  L ++ NPLR +
Sbjct: 213 PQGISSTLPHLMRLDVSANELTNLPTE-LGLMQSLQVLLVERNPLRSI 259


>gi|195391504|ref|XP_002054400.1| GJ22826 [Drosophila virilis]
 gi|261277888|sp|B4LXW1.1|SUR8_DROVI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194152486|gb|EDW67920.1| GJ22826 [Drosophila virilis]
          Length = 614

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 196/406 (48%), Gaps = 20/406 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  + +TVL N  +     LTEL    N +  +P  IG L  L  L L++N + S
Sbjct: 135 IKRLDLSKSSITVLPNT-VRECVHLTELYLYSNKIGQLPTEIGCLVNLRNLALNENSLTS 193

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S+  C  L    + +N L+ +P+ + +L  L TL L  N++     +  QL  L++L
Sbjct: 194 LPESLKHCTQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 253

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N +  L   IG +  L  L ++ N L  L   + N    + L    + L +  DS 
Sbjct: 254 SLRENKIKELGSAIGALVNLTTLDVSHNHLEHLPDDIGNCVNLSALDLQHNELLDIPDSI 313

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-L 238
            +   + L+ +  R +            L+++P  +     + + ++  N I +LP   L
Sbjct: 314 GNL--KSLVRLGLRYN-----------RLNSVPISLKNCKSMDEFNVEGNGITQLPDGML 360

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +S ++L T+ LSRN+   +P       +++  + L++N + ++P   F     L  L++ 
Sbjct: 361 ASLSALTTITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMK 420

Query: 299 YNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N+  +LP +    +  ++ EL L    L++ P DI+ LQ L IL LS N L+ IP    
Sbjct: 421 ENMLTALPLD--VGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 478

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L  LDL +N I  LP E+GLL   LQ L L  N +  + R+I
Sbjct: 479 NLRKLRILDLEENRIEVLPHEIGLLH-ELQRLILQTNQITMLPRSI 523



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E N++  +   + +    LT+L   +N+L  +P  +G+   ++ L+L  N +  +P 
Sbjct: 393 INLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDVGTWVNMVELNLATNALQKLPD 452

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    + NN L  +P  +G L KL  LDL  N+++    E   L  L  L L 
Sbjct: 453 DIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQ 512

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
            N ++ LP  IG ++ L  L ++ N L+ L
Sbjct: 513 TNQITMLPRSIGHLSNLTHLSVSENNLQFL 542


>gi|405966144|gb|EKC31462.1| hypothetical protein CGI_10021564 [Crassostrea gigas]
          Length = 717

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 183/403 (45%), Gaps = 25/403 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L + GN+LT +  + I   T LT +  + NL+  +PE    L  L  + L  N+I +
Sbjct: 272 LQMLTMSGNRLTSIQPD-IGRLTQLTVIGLNNNLIEEIPEEFFQLEALEVVGLENNKIKA 330

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP +I+    L E Y+G N++  +P  L   S L  L L +N +    VE   L R+  L
Sbjct: 331 IPDNIANLYELRELYLGRNSIEHVPENLCWCSNLEVLSLLNNSISVLPVEVENLRRIHTL 390

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LSNN    LP  IG +  L      GN L  +            LK LR         +
Sbjct: 391 ILSNNKFEFLPEAIGLIRDLEIFFADGNKLSYVPVDF------GTLKRLRQ-------ID 437

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            S+ K  +  +      T + L L    + +IP+EI     ++ L L+ N I    PEL 
Sbjct: 438 LSSNKFSIFPLPICNLKTVESLKLSKNEIESIPAEIANLDRLSSLYLNNNKIHTFAPELC 497

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL-- 297
           S   L  L  S N ++D PDAI + + +L+ L L +N   + P      IP L+ L    
Sbjct: 498 SLIQLHILDFSNNYVEDIPDAI-SQMENLTDLDLSHNRFLEFPK-TVVGIPRLERLKFDQ 555

Query: 298 --SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
              + +  LP+   FS++ +   L +    LR  P+ +  ++ +  +    N +  +P+ 
Sbjct: 556 AEGHPVPGLPDEIEFSNVSY---LIVSNNTLRTLPSTMSGMKNIISIIADHNEIGELPDS 612

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           F  L  L  L L+DN +S+LP     L  +L+ LRL  NPLR+
Sbjct: 613 FCRLRRLQVLHLNDNKLSSLPENFDHLR-NLKDLRLHNNPLRT 654



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 201/456 (44%), Gaps = 65/456 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  NKL+ L+   I   T LT L  S N ++ +   I  L  L  L +  NR+ +
Sbjct: 111 LQELDLSHNKLSTLTRG-IYLLTELTFLDVSNNEVSEILSEISGLEHLRELVVSDNRLTA 169

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I     +    + +N ++ LP  +G+L+ L  L L  N L+    E C++ +L  L
Sbjct: 170 VPPQIRDLLEITHLVLNDNQITVLPDSIGELTTLQVLGLERNALEFLNPEVCKIEQLKRL 229

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LS NSL  LP EI   + L +LLL  N    +   +    T  +L    +RL   +   
Sbjct: 230 GLSGNSLRNLPREIENFSCLEELLLDDNEFEFIPVQVFWMETLQMLTMSGNRLTSIQPDI 289

Query: 180 ASTTKEDLITMATRLSVTSKE----------LSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
              T+  +I +   L     E          + LE   + AIP  I    E+ +L L RN
Sbjct: 290 GRLTQLTVIGLNNNLIEEIPEEFFQLEALEVVGLENNKIKAIPDNIANLYELRELYLGRN 349

Query: 230 SIQELPPELSSCASLQ-----------------------TLILSRNKIKDWPDAILTSLS 266
           SI+ +P  L  C++L+                       TLILS NK +  P+AI   + 
Sbjct: 350 SIEHVPENLCWCSNLEVLSLLNNSISVLPVEVENLRRIHTLILSNNKFEFLPEAI-GLIR 408

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS---YNIASLP-----------------E 306
            L     D N L  VP D F  +  L+ +DLS   ++I  LP                 E
Sbjct: 409 DLEIFFADGNKLSYVPVD-FGTLKRLRQIDLSSNKFSIFPLPICNLKTVESLKLSKNEIE 467

Query: 307 NPP--FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
           + P   ++L  L  LYL   ++     ++  L QL ILD S N ++ IP+    + +LT+
Sbjct: 468 SIPAEIANLDRLSSLYLNNNKIHTFAPELCSLIQLHILDFSNNYVEDIPDAISQMENLTD 527

Query: 365 LDLSDNNISALPPE-LGLLEPSLQALRLD---GNPL 396
           LDLS N     P   +G+  P L+ L+ D   G+P+
Sbjct: 528 LDLSHNRFLEFPKTVVGI--PRLERLKFDQAEGHPV 561



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 187/380 (49%), Gaps = 25/380 (6%)

Query: 39  PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 98
           P+ I S+  +  L L  N++  IP  IS  C+L E  + +N LS L   +  L++L  LD
Sbjct: 79  PQAILSMENITYLCLSNNKLTEIPKEISNLCNLQELDLSHNKLSTLTRGIYLLTELTFLD 138

Query: 99  LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
           + +N++ E   E   L  L  L +S+N L+ +PP+I  +  +  L+L  N +  L  S+ 
Sbjct: 139 VSNNEVSEILSEISGLEHLRELVVSDNRLTAVPPQIRDLLEITHLVLNDNQITVLPDSIG 198

Query: 158 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 217
              T  +L   R+ L E  + E    ++             K L L G +L  +P EI  
Sbjct: 199 ELTTLQVLGLERNAL-EFLNPEVCKIEQ------------LKRLGLSGNSLRNLPREIEN 245

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD-WPDAILTSLSSLSCLKLDNN 276
              + +L L  N  + +P ++    +LQ L +S N++    PD  +  L+ L+ + L+NN
Sbjct: 246 FSCLEELLLDDNEFEFIPVQVFWMETLQMLTMSGNRLTSIQPD--IGRLTQLTVIGLNNN 303

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            + ++P + F+ +  L+++ L  N I ++P+N   ++L  L+ELYL R  +   P ++  
Sbjct: 304 LIEEIPEEFFQ-LEALEVVGLENNKIKAIPDN--IANLYELRELYLGRNSIEHVPENLCW 360

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
              L +L L  NS+  +P   +NL  +  L LS+N    LP  +GL+   L+    DGN 
Sbjct: 361 CSNLEVLSLLNNSISVLPVEVENLRRIHTLILSNNKFEFLPEAIGLIR-DLEIFFADGNK 419

Query: 396 LRSIRRTILDRGTKAVLKYL 415
           L  +    +D GT   L+ +
Sbjct: 420 LSYVP---VDFGTLKRLRQI 436



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 109/226 (48%), Gaps = 27/226 (11%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           + L G  L   P  I     IT L LS N + E+P E+S+  +LQ L LS NK+      
Sbjct: 68  VDLRGHRLKECPQAILSMENITYLCLSNNKLTEIPKEISNLCNLQELDLSHNKLSTLTRG 127

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSD--GFKDI------------------PMLQILDLSYN 300
           I   L+ L+ L + NN + ++ S+  G + +                   +L+I  L  N
Sbjct: 128 IYL-LTELTFLDVSNNEVSEILSEISGLEHLRELVVSDNRLTAVPPQIRDLLEITHLVLN 186

Query: 301 ---IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
              I  LP++     L  LQ L L R  L     ++ +++QL+ L LS NSL+++P   +
Sbjct: 187 DNQITVLPDS--IGELTTLQVLGLERNALEFLNPEVCKIEQLKRLGLSGNSLRNLPREIE 244

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           N + L EL L DN    +P ++  +E +LQ L + GN L SI+  I
Sbjct: 245 NFSCLEELLLDDNEFEFIPVQVFWME-TLQMLTMSGNRLTSIQPDI 289



 Score = 45.1 bits (105), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 44/91 (48%)

Query: 22  WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 81
           ++ ++ LI S N L  +P T+  +  +I +    N I  +P S      L   ++ +N L
Sbjct: 570 FSNVSYLIVSNNTLRTLPSTMSGMKNIISIIADHNEIGELPDSFCRLRRLQVLHLNDNKL 629

Query: 82  SALPAELGKLSKLGTLDLHSNQLKEYCVEAC 112
           S+LP     L  L  L LH+N L+   ++ C
Sbjct: 630 SSLPENFDHLRNLKDLRLHNNPLRTPPMDVC 660


>gi|428164457|gb|EKX33482.1| hypothetical protein GUITHDRAFT_81382, partial [Guillardia theta
           CCMP2712]
          Length = 566

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 206/443 (46%), Gaps = 51/443 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTEL--IASKNLLNGMPETIGSLSRLIRLDLHQNRI 58
           ++ L + GNK + L +      T L +L    S N L  +P+ IG L+ LIRL++  N+I
Sbjct: 85  LTALSISGNKFSYLPS-FFCDMTSLKDLHLWLSFNQLKKLPQAIGQLAGLIRLNVENNQI 143

Query: 59  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 117
            S+P  I    +L E +  +NA++ +P  +G L +L  + L +N L     E CQL  L 
Sbjct: 144 SSLPPQIGQLTTLRELWANDNAITQIPPVIGLLVELREVRLSNNSLSNLPNEVCQLGELK 203

Query: 118 VLDLSNNS-----------------------LSGLPPEIGKMTTLRKLLLTGNPLRTLRS 154
            L +SNN                        ++ LP  IG  T L+ L L  N L+TL +
Sbjct: 204 QLRISNNQIRALPNNFHLLTSLTELSLSGNPITALPVNIGIFTELKNLDLESNQLKTLPA 263

Query: 155 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 214
           ++       L K     L  N   +   +   L  +        +EL L    L ++PS 
Sbjct: 264 AI-----GQLTKLQTLHLQSNNLHDLPNSIRKLKNL--------EELCLHDNQLESLPSG 310

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           +W    +  + L  N ++ +PPE++  A L  L ++ N++   P  I   L +LS L L+
Sbjct: 311 LWTLNNLKTISLENNQLRRIPPEIAGMAYLSRLQVAYNQLTSLPTNI-GLLPALSRLNLE 369

Query: 275 NNPLRQV-PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
            N L  + P+ G   + +L+ L + +N I  LP  P   +L +L++L +   Q++  P +
Sbjct: 370 GNQLSLLSPAIGM--LTLLEALKVDFNMIQILP--PEIGNLRNLEDLSICNNQVKTLPPE 425

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
           + +L +LR L +S NSL SI      LT L  L  + N I  LPP LGLL  +L  L L 
Sbjct: 426 LFKLTKLRRLAISNNSLNSISGEISLLTGLQSLVTTGNRIRILPPSLGLLT-NLTELYLH 484

Query: 393 GNPLRSIRRTILDRGTKAVLKYL 415
            N L      +   GT   LK +
Sbjct: 485 DNSLTHFPEEV---GTMYSLKTI 504



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 201/438 (45%), Gaps = 41/438 (9%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +L+VE N+++ L    I   T L EL A+ N +  +P  IG L  L  + L  N + ++P
Sbjct: 135 RLNVENNQISSLPPQ-IGQLTTLRELWANDNAITQIPPVIGLLVELREVRLSNNSLSNLP 193

Query: 63  SSISGCCSLAEFYMGNNAL-----------------------SALPAELGKLSKLGTLDL 99
           + +     L +  + NN +                       +ALP  +G  ++L  LDL
Sbjct: 194 NEVCQLGELKQLRISNNQIRALPNNFHLLTSLTELSLSGNPITALPVNIGIFTELKNLDL 253

Query: 100 HSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV- 157
            SNQLK       QL +L  L L +N+L  LP  I K+  L +L L  N L +L S L  
Sbjct: 254 ESNQLKTLPAAIGQLTKLQTLHLQSNNLHDLPNSIRKLKNLEELCLHDNQLESLPSGLWT 313

Query: 158 --NGPTPALLKYLRSRLPENEDSEASTTK-----EDLITMATRLSV--TSKELSLEGMNL 208
             N  T +L      R+P      A  ++       L ++ T + +      L+LEG  L
Sbjct: 314 LNNLKTISLENNQLRRIPPEIAGMAYLSRLQVAYNQLTSLPTNIGLLPALSRLNLEGNQL 373

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
           S +   I     +  L +  N IQ LPPE+ +  +L+ L +  N++K  P  +   L+ L
Sbjct: 374 SLLSPAIGMLTLLEALKVDFNMIQILPPEIGNLRNLEDLSICNNQVKTLPPELF-KLTKL 432

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 327
             L + NN L  + S     +  LQ L  + N I  LP  P    L +L ELYL    L 
Sbjct: 433 RRLAISNNSLNSI-SGEISLLTGLQSLVTTGNRIRILP--PSLGLLTNLTELYLHDNSLT 489

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
             P ++  +  L+ + L+ N L+ I  GF  +TSLT + L+DN I  +P  +  +   L 
Sbjct: 490 HFPEEVGTMYSLKTITLNNNKLKEISAGFMRVTSLTSMQLADNKIQIVPTWMWKVS-KLS 548

Query: 388 ALRLDGNPLRSIRRTILD 405
           +L LDGNPL S    IL+
Sbjct: 549 SLNLDGNPLSSPPERILE 566



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 185/405 (45%), Gaps = 68/405 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I S   L  L  S N +  +P+ IG L+ L +L L+ N++ S+PS +    +L   ++ N
Sbjct: 10  IFSIPSLKSLSLSDNQIKVIPKEIGMLTALFQLRLNGNQLSSLPSEMGNLTNLQTLWVQN 69

Query: 79  NALSALPAELGKLSKLGTL---------------------DLH----SNQLKEYCVEACQ 113
           N    +P+E+  L+ L  L                     DLH     NQLK+      Q
Sbjct: 70  NKFVDVPSEIQTLTGLTALSISGNKFSYLPSFFCDMTSLKDLHLWLSFNQLKKLPQAIGQ 129

Query: 114 LR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 172
           L  L  L++ NN +S LPP+IG++TTLR+L    N +  +       P   LL  LR   
Sbjct: 130 LAGLIRLNVENNQISSLPPQIGQLTTLRELWANDNAITQIP------PVIGLLVELR--- 180

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
                                      E+ L   +LS +P+E+ + GE+ +L +S N I+
Sbjct: 181 ---------------------------EVRLSNNSLSNLPNEVCQLGELKQLRISNNQIR 213

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            LP       SL  L LS N I   P  I    + L  L L++N L+ +P+     +  L
Sbjct: 214 ALPNNFHLLTSLTELSLSGNPITALPVNI-GIFTELKNLDLESNQLKTLPA-AIGQLTKL 271

Query: 293 QILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           Q L L S N+  LP +     L +L+EL L   QL   P+ +  L  L+ + L  N L+ 
Sbjct: 272 QTLHLQSNNLHDLPNS--IRKLKNLEELCLHDNQLESLPSGLWTLNNLKTISLENNQLRR 329

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           IP     +  L+ L ++ N +++LP  +GLL P+L  L L+GN L
Sbjct: 330 IPPEIAGMAYLSRLQVAYNQLTSLPTNIGLL-PALSRLNLEGNQL 373



 Score = 41.2 bits (95), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
           M L   P DI  +  L+ L LS N ++ IP+    LT+L +L L+ N +S+LP E+G L 
Sbjct: 1   MGLPIFPKDIFSIPSLKSLSLSDNQIKVIPKEIGMLTALFQLRLNGNQLSSLPSEMGNLT 60

Query: 384 PSLQALRLDGNPLRSI 399
            +LQ L +  N    +
Sbjct: 61  -NLQTLWVQNNKFVDV 75


>gi|27819886|gb|AAO24991.1| LP05663p [Drosophila melanogaster]
          Length = 527

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 196/410 (47%), Gaps = 20/410 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  + +TV+ +  +     LTEL    N +  +P  IG L  L  L L++N + S
Sbjct: 48  IKRLDLSKSSITVIPST-VKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTS 106

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S+  C  L    + +N L+ +P  + +L  L TL L  N++     +  QL  L++L
Sbjct: 107 LPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 166

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N +  L   IG +  L  L ++ N L  L   + N    + L    + L +  DS 
Sbjct: 167 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 226

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-L 238
            +   + L+ +  R +            LS++P+ +     + + ++  N I +LP   L
Sbjct: 227 GNL--KSLVRLGMRYN-----------RLSSVPATLKNCKSMDEFNVEGNGITQLPDGML 273

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +S + L T+ LSRN+   +P       +++  + L++N + ++P   F     L  L++ 
Sbjct: 274 ASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMK 333

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + +LP +    +  ++ EL L    L++ P DI+ LQ L IL LS N L+ IP    
Sbjct: 334 ENMLTALPLD--IGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 391

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
           NL  L  LDL +N I  LP E+GLL   LQ L L  N +  + R+I   G
Sbjct: 392 NLRKLRILDLEENRIEVLPHEIGLLH-ELQRLILQTNQITMLPRSIGHLG 440



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 199/430 (46%), Gaps = 47/430 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L  L  ++N L  +PE++ + S+L  LDL  N++  IP  I    SL   Y+  
Sbjct: 88  IGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRF 147

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++A+  +L +L  L  L L  N+++E       L  L+ LD+S+N L  LP +IG   
Sbjct: 148 NRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCV 207

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L  +  S+ N     L   +R  +  N  S    T ++  +M       
Sbjct: 208 NLSALDLQHNELLDIPDSIGN-----LKSLVRLGMRYNRLSSVPATLKNCKSM------- 255

Query: 198 SKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIK 255
             E ++EG  ++ +P  +  +   +T + LSRN     P    +   ++ ++ L  N+I 
Sbjct: 256 -DEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRID 314

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             P  I +    L+ L +  N L  +P D    + M++ L+L+ N +  LP++    +L 
Sbjct: 315 KIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE-LNLATNALQKLPDD--IMNLQ 371

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-------------------- 354
           +L+ L L    L++ P  I  L++LRILDL +N ++ +P                     
Sbjct: 372 NLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITM 431

Query: 355 ---GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAV 411
                 +L +LT L +S+NN+  LP E+G LE SL+ L ++ NP   + +   +      
Sbjct: 432 LPRSIGHLGNLTHLSVSENNLQFLPEEIGSLE-SLENLYINQNP--GLEKLPFELALCQN 488

Query: 412 LKYLK-DKIP 420
           LKYL  DK P
Sbjct: 489 LKYLNIDKCP 498



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 177/407 (43%), Gaps = 68/407 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I +   LT L  S N L  +PE IG+   L  LDL  N +L IP SI    SL    M  
Sbjct: 180 IGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRY 239

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKM 136
           N LS++PA L     +   ++  N + +    + A    L+ + LS N  +  P      
Sbjct: 240 NRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYP------ 293

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
                   TG P                                          A   +V
Sbjct: 294 --------TGGP------------------------------------------AQFTNV 303

Query: 197 TSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
            S  ++LE   +  IP  I+  A  +TKL++  N +  LP ++ +  ++  L L+ N ++
Sbjct: 304 YS--INLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQ 361

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             PD I+ +L +L  L L NN L+++P +   ++  L+ILDL  N I  LP       L 
Sbjct: 362 KLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNLRKLRILDLEENRIEVLPHE--IGLLH 417

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NIS 373
            LQ L L+  Q+   P  I  L  L  L +S+N+LQ +PE   +L SL  L ++ N  + 
Sbjct: 418 ELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLE 477

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            LP EL L + +L+ L +D  PL +I   I   G   VL++LK   P
Sbjct: 478 KLPFELALCQ-NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSP 523



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E N++  +   + +    LT+L   +N+L  +P  IG+   ++ L+L  N +  +P 
Sbjct: 306 INLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPD 365

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    + NN L  +P  +G L KL  LDL  N+++    E   L  L  L L 
Sbjct: 366 DIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQ 425

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
            N ++ LP  IG +  L  L ++ N L+ L
Sbjct: 426 TNQITMLPRSIGHLGNLTHLSVSENNLQFL 455



 Score = 45.4 bits (106), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           R + ++ LDLS++S+  IP   K    LTEL L  N I  LPPE+G L  SL+ L L+ N
Sbjct: 44  RDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLV-SLRNLALNEN 102

Query: 395 PLRSIRRTILDRGTKAVLKYLKDKIPE 421
            L S+  ++ +     VL    +K+ E
Sbjct: 103 SLTSLPESLQNCSQLKVLDLRHNKLAE 129


>gi|432848516|ref|XP_004066384.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Oryzias
           latipes]
          Length = 582

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 195/406 (48%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +   + L  L  S+N L  +P+++ SL +L  LDL  N++  
Sbjct: 125 LAELYLYSNKLQSLPAE-VGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP+ +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L                    PE   + 
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDL--------------------PETIGNL 283

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
           AS  +                L L    LSAIP  + +  E+ +L+L  N+I  LP  L 
Sbjct: 284 ASINR----------------LGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS  +L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNHINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLAKIPEDVCGLVSLEVLILSNNLLKKLPHGIG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N +  LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLECLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +P+ I E  ++ +L L  N +Q LP E+   + L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHMLPTSIKELNQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L SL  L  L L +N LR++P+  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDSLKKLRMLDLRHNKLREIPAVVYR-LTSLTTLYLRFNRITTVEK-DIRNLSKLT 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPE 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  S+  L L  N L +I R++
Sbjct: 279 TIGNL-ASINRLGLRYNRLSAIPRSL 303



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N +  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNHINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLAKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            + G  SL    + NN L  LP  +G L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L+ L
Sbjct: 480 NNQLTTLPRGIGHLTNLTHLGLGENLLQHL 509


>gi|332017140|gb|EGI57939.1| Leucine-rich repeat protein soc-2-like protein [Acromyrmex
           echinatior]
          Length = 615

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 178/393 (45%), Gaps = 45/393 (11%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
           RLDL +  I ++PSS+     L EFY+  N L+ LP E+G LS L TL L  N L     
Sbjct: 138 RLDLSKACITTLPSSVKELKHLREFYLYGNKLTTLPPEIGYLSNLETLALSENSLTNLPN 197

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
               L+ L VLDL +N L  +P  + K+T+L  L L  N ++ +++++ N     +L + 
Sbjct: 198 TLENLKSLRVLDLRHNKLIVIPDVVYKLTSLTTLFLRFNRVKYVKNNICNLTNLTMLSF- 256

Query: 169 RSRLPENEDSEASTTKEDLITMATR---------------LSVTSKELSLEGMNLSAIPS 213
                EN+  E      +L+ + T                  V    L ++   L  +P 
Sbjct: 257 ----RENKIKELPAGIGELVNLLTFDVSHNHLEHLPPEIGKCVQLSTLDVQHNELLDLPD 312

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
            I     +T+L +  N +  +P  L++C  +    +  N+I   PD +L SLS L+ + L
Sbjct: 313 TIGNLVSLTRLGIRYNKLTSIPKSLANCKLMDEFSVEGNQISHLPDGLLASLSYLTTITL 372

Query: 274 DNNPLRQVPSDG---FKD-----IPMLQILDLSYNIASLPEN--------PPFSSLP--- 314
             N     P+ G   F +     +   +I  + Y I S  +N           ++LP   
Sbjct: 373 SRNLFTSYPAGGPGQFVNAYSINVEHNEIDKIPYGIFSRSKNLTKLNMKENKLNTLPLDI 432

Query: 315 ----HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
                + EL L   QL + P DI  LQ L IL LS N L+ IP    NL  L  LDL +N
Sbjct: 433 GSWVAMVELNLGTNQLTKLPDDIQCLQSLEILILSNNGLKHIPTTIVNLQKLRVLDLEEN 492

Query: 371 NISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            I  LP E+GL+   LQ L L  N L  + RTI
Sbjct: 493 YIDVLPNEIGLMT-ELQKLILQSNKLTELPRTI 524



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 209/452 (46%), Gaps = 45/452 (9%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           GNKLT L    I   + L  L  S+N L  +P T+ +L  L  LDL  N+++ IP  +  
Sbjct: 166 GNKLTTLPPE-IGYLSNLETLALSENSLTNLPNTLENLKSLRVLDLRHNKLIVIPDVVYK 224

Query: 68  CCSLAEFYM-----------------------GNNALSALPAELGKLSKLGTLDLHSNQL 104
             SL   ++                         N +  LPA +G+L  L T D+  N L
Sbjct: 225 LTSLTTLFLRFNRVKYVKNNICNLTNLTMLSFRENKIKELPAGIGELVNLLTFDVSHNHL 284

Query: 105 KEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 163
           +    E  + ++LS LD+ +N L  LP  IG + +L +L +  N L ++  SL N     
Sbjct: 285 EHLPPEIGKCVQLSTLDVQHNELLDLPDTIGNLVSLTRLGIRYNKLTSIPKSLANCKLMD 344

Query: 164 LLKYLRSRLPENEDS-EASTTKEDLITMATRL-----------SVTSKELSLEGMNLSAI 211
                 +++    D   AS +    IT++  L            V +  +++E   +  I
Sbjct: 345 EFSVEGNQISHLPDGLLASLSYLTTITLSRNLFTSYPAGGPGQFVNAYSINVEHNEIDKI 404

Query: 212 PSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           P  I+  +  +TKL++  N +  LP ++ S  ++  L L  N++   PD I   L SL  
Sbjct: 405 PYGIFSRSKNLTKLNMKENKLNTLPLDIGSWVAMVELNLGTNQLTKLPDDI-QCLQSLEI 463

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 329
           L L NN L+ +P+    ++  L++LDL  N I  LP       +  LQ+L L+  +L E 
Sbjct: 464 LILSNNGLKHIPTT-IVNLQKLRVLDLEENYIDVLPNE--IGLMTELQKLILQSNKLTEL 520

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELGLLEPSLQA 388
           P  I  L+ L  L + +N L  +PE    L SL  L L+DN ++  LP EL L + +L  
Sbjct: 521 PRTIGHLRNLTYLSVGENQLTYLPEEVGTLESLESLYLNDNKSLHNLPFELALCK-NLGI 579

Query: 389 LRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           + ++  PL  I   I+  G   V+++LK + P
Sbjct: 580 MSIENCPLSHIPMEIVAGGPSLVIQFLKMQGP 611



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 125/295 (42%), Gaps = 63/295 (21%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET------------------- 41
           M +  VEGN+++ L + L+AS + LT +  S+NL    P                     
Sbjct: 343 MDEFSVEGNQISHLPDGLLASLSYLTTITLSRNLFTSYPAGGPGQFVNAYSINVEHNEID 402

Query: 42  ---IGSLSR---LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 95
               G  SR   L +L++ +N++ ++P  I    ++ E  +G N L+ LP ++  L  L 
Sbjct: 403 KIPYGIFSRSKNLTKLNMKENKLNTLPLDIGSWVAMVELNLGTNQLTKLPDDIQCLQSLE 462

Query: 96  TLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 154
            L L +N LK        L +L VLDL  N +  LP EIG MT L+KL+L  N L  L  
Sbjct: 463 ILILSNNGLKHIPTTIVNLQKLRVLDLEENYIDVLPNEIGLMTELQKLILQSNKLTEL-- 520

Query: 155 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 214
                  P  + +LR+                     T LSV   +       L+ +P E
Sbjct: 521 -------PRTIGHLRN--------------------LTYLSVGENQ-------LTYLPEE 546

Query: 215 IWEAGEITKLDLSRN-SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
           +     +  L L+ N S+  LP EL+ C +L  + +    +   P  I+    SL
Sbjct: 547 VGTLESLESLYLNDNKSLHNLPFELALCKNLGIMSIENCPLSHIPMEIVAGGPSL 601



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 4/205 (1%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           + L L    ++ +PS + E   + +  L  N +  LPPE+   ++L+TL LS N + + P
Sbjct: 137 RRLDLSKACITTLPSSVKELKHLREFYLYGNKLTTLPPEIGYLSNLETLALSENSLTNLP 196

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 318
           +  L +L SL  L L +N L  +P   +K +  L  L L +N     +N    +L +L  
Sbjct: 197 NT-LENLKSLRVLDLRHNKLIVIPDVVYK-LTSLTTLFLRFNRVKYVKN-NICNLTNLTM 253

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L  R  +++E P  I  L  L   D+S N L+ +P        L+ LD+  N +  LP  
Sbjct: 254 LSFRENKIKELPAGIGELVNLLTFDVSHNHLEHLPPEIGKCVQLSTLDVQHNELLDLPDT 313

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTI 403
           +G L  SL  L +  N L SI +++
Sbjct: 314 IGNL-VSLTRLGIRYNKLTSIPKSL 337



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 5/161 (3%)

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
           + +LDLS+  I  LP  +     L+   L  NK+   P  I   LS+L  L L  N L  
Sbjct: 136 VRRLDLSKACITTLPSSVKELKHLREFYLYGNKLTTLPPEI-GYLSNLETLALSENSLTN 194

Query: 281 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
           +P +  +++  L++LDL +N +  +P+      L  L  L+LR  +++    +I  L  L
Sbjct: 195 LP-NTLENLKSLRVLDLRHNKLIVIPD--VVYKLTSLTTLFLRFNRVKYVKNNICNLTNL 251

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
            +L   +N ++ +P G   L +L   D+S N++  LPPE+G
Sbjct: 252 TMLSFRENKIKELPAGIGELVNLLTFDVSHNHLEHLPPEIG 292



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           +R LDLS+  + ++P   K L  L E  L  N ++ LPPE+G L  +L+ L L  N L +
Sbjct: 136 VRRLDLSKACITTLPSSVKELKHLREFYLYGNKLTTLPPEIGYLS-NLETLALSENSLTN 194

Query: 399 IRRTILDRGTKAVLKYLKDKI 419
           +  T+ +  +  VL    +K+
Sbjct: 195 LPNTLENLKSLRVLDLRHNKL 215


>gi|45657380|ref|YP_001466.1| hypothetical protein LIC11505 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421087857|ref|ZP_15548692.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102412|ref|ZP_15563016.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45600619|gb|AAS70103.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367526|gb|EKP22910.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410429598|gb|EKP73974.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 572

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 139/459 (30%), Positives = 207/459 (45%), Gaps = 68/459 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L N  I     L EL   KN L   P+ IG L  L +L L +NR+ +
Sbjct: 96  LESLDLSENRLVMLPNE-IGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTA 154

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    + NN  + LP E+G+L  L TL+L  NQL    VE  QL+ L  L
Sbjct: 155 LPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQEL 214

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL-----LTGNP-----LRTLRS-SLVNGPTPALLKYL 168
            L NN L+ LP EIG++  L+ L      LT  P     L+ L++ +LVN     L K +
Sbjct: 215 YLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 274

Query: 169 --------------------RSRLPE---NEDSEASTTKEDLI----TMATRLSVTSKEL 201
                               R R+ +   + + +     ED +     +A    +   +L
Sbjct: 275 GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDL 334

Query: 202 SLEGMNLSAI-PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
            L+  N S + P  I +   + +L L       LP E+S   +L+ L L  N +K+ P  
Sbjct: 335 RLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSE 394

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSD----------------------GFKDIPMLQILDLS 298
           I   L +L  L L+ N L ++P +                        + +  LQ LDLS
Sbjct: 395 I-GQLKNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLS 453

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N   + P+      L +LQ L L+R QL     +I +LQ L+ LDL+ N    +P+   
Sbjct: 454 VNQFTTFPK--EIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIG 511

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L  L  LDL +N ++ LP E+G L+ +LQ L L  N L
Sbjct: 512 KLKKLQTLDLRNNQLTTLPTEIGQLQ-NLQWLYLQNNQL 549



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 188/416 (45%), Gaps = 72/416 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+L      +I     L  L  S+N L  +P  IG L  L  L L++N++ +
Sbjct: 73  LQELDLRDNQLATFPA-VIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLTT 131

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
            P  I    +L + ++  N L+ALP E+G+L  L TLDL +NQ      E  QL+ L  L
Sbjct: 132 FPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTL 191

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL-PENEDS 178
           +L +N L+ LP EIG++  L++L L  N L  L   +        L+ L++   PEN   
Sbjct: 192 NLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEI------GQLQNLQTLCSPENR-- 243

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                                        L+A+P E+ +   +  L+L  N +  LP E+
Sbjct: 244 -----------------------------LTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 274

Query: 239 SSCASLQTLIL--------SRNKIKD-WPDAILTSLSSLSCLKLDNNPLRQVPSDG-FKD 288
               +LQ L L         R +I+  +PD+              N  LR+V  DG +++
Sbjct: 275 GQLQNLQDLELLMNPLSLKERKRIQKLFPDS--------------NLDLREVAEDGVYRN 320

Query: 289 IPM-----LQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           + +     L++ DL     +  +  P       +L+ELYL        P +I RL+ L+ 
Sbjct: 321 LNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKY 380

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
           L L  N L++IP     L +L  L+L  N +  LP E+G L  +LQ L L  N L+
Sbjct: 381 LALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLR-NLQRLSLHQNTLK 435



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 178/418 (42%), Gaps = 54/418 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ +
Sbjct: 142 LQKLWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLAT 200

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+ NN L+ LP E+G+L  L TL    N+L     E  QL+ L  L
Sbjct: 201 LPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTL 260

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E
Sbjct: 261 NLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAE 314

Query: 180 ASTTK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWE 217
               +       E L     RL   +               +EL L     S +P EI  
Sbjct: 315 DGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISR 374

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              +  L L  N ++ +P E+    +L+ L L  N+++  P  I   L +L  L L  N 
Sbjct: 375 LKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEI-GQLRNLQRLSLHQNT 433

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPEN---------------------PPFSSLPH 315
           L+  P++  + +  LQ LDLS N   + P+                           L +
Sbjct: 434 LKIFPAE-IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQN 492

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
           LQEL L   Q    P +I +L++L+ LDL  N L ++P     L +L  L L +N +S
Sbjct: 493 LQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS 550



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 42/284 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS  + + LP EI ++  L++L L  N L T  + +V       L+ L S   
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVE------LQKLES--- 98

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                      L L    L  +P+EI     + +L L +N +  
Sbjct: 99  ---------------------------LDLSENRLVMLPNEIGRLQNLQELGLYKNKLTT 131

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
            P E+    +LQ L LS N++   P  I   L +L  L L NN    +P +    +  LQ
Sbjct: 132 FPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQNNQFTILPKE-IGQLQNLQ 189

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L+L  N +A+LP       L +LQELYLR  +L   P +I +LQ L+ L   +N L ++
Sbjct: 190 TLNLQDNQLATLP--VEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTAL 247

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           P+    L +L  L+L +N ++ LP E+G L+ +LQ L L  NPL
Sbjct: 248 PKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQ-NLQDLELLMNPL 290



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 103/254 (40%), Gaps = 37/254 (14%)

Query: 18  LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           +I  +  L EL       + +P+ I  L  L  L L  N + +IPS I    +L    + 
Sbjct: 348 VILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLE 407

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
            N L  LP E+G+L  L  L LH N LK +  E  QL+ L  LDLS N  +  P EIGK+
Sbjct: 408 ANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKL 467

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L+ L L  N L  L + +  G    L                                
Sbjct: 468 ENLQTLNLQRNQLTNLTAEI--GQLQNL-------------------------------- 493

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             +EL L     + +P EI +  ++  LDL  N +  LP E+    +LQ L L  N++  
Sbjct: 494 --QELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSL 551

Query: 257 WPDAILTSLSSLSC 270
                +  L  L C
Sbjct: 552 KEQERIRKLLPLKC 565



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 7/144 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N L +     I     L +L  S N     P+ IG L  L  L+L +N++ +
Sbjct: 424 LQRLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTN 482

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           + + I    +L E  + +N  + LP E+GKL KL TLDL +NQL     E  QL+ L  L
Sbjct: 483 LTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWL 542

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLL 143
            L NN LS     + +   +RKLL
Sbjct: 543 YLQNNQLS-----LKEQERIRKLL 561



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 4/113 (3%)

Query: 292 LQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
           +++LDLS  N  +LP+      L +LQEL LR  QL   P  I+ LQ+L  LDLS+N L 
Sbjct: 50  VRVLDLSGQNFTTLPK--EIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLV 107

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            +P     L +L EL L  N ++  P E+G L+ +LQ L L  N L ++ + I
Sbjct: 108 MLPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQ-NLQKLWLSENRLTALPKEI 159


>gi|427722688|ref|YP_007069965.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
 gi|427354408|gb|AFY37131.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
          Length = 1183

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 189/398 (47%), Gaps = 43/398 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N       + +A+   L +L    N +  +P  + +L  L +L L+   I  
Sbjct: 141 LQQLDLSANHQIKEIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGIKE 200

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP S++   +L + Y+ NN +  +P  L  LS L  L L+ N++K+      +L  L  L
Sbjct: 201 IPDSLAALVNLQQLYLYNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLASLQQL 260

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL+ N +S +P     +  L+KL L  N ++ +  S   G   +L               
Sbjct: 261 DLNINQISEIPDSFATLKNLQKLDLGSNQIKKIPDSF--GKLASL--------------- 303

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              ++L+L    +  IP    +   + +L+LS N I+E+P   +
Sbjct: 304 -------------------QQLNLGSNQIKKIPDSFGKLASLQQLNLSHNKIEEIPDSFA 344

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  +LQ L L  N IK+ PD+ L +L +L  L   +N ++++P D    +  LQ LD+S 
Sbjct: 345 TLVNLQQLYLYNNPIKEVPDS-LATLVNLQQLGFSSNQIKEIP-DSLATLVNLQQLDISS 402

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N I  +P++   ++L HLQ L L   Q+ E P  +  L  L+ L+LS N ++ IP+ F  
Sbjct: 403 NQIKEIPDS--LAALTHLQNLGLSSTQITEIPDFLSTLVNLQQLNLSFNQIKKIPDSFVK 460

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           L SL  L L  N I+ +P  L  L P+LQ L L  NP+
Sbjct: 461 LASLQALYLCSNQITKIPSFLENL-PALQKLDLRLNPI 497



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 181/367 (49%), Gaps = 18/367 (4%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
           A +N L  +P     L +L RL+   N + +IP  I+    L +  +  N +  +P  L 
Sbjct: 53  AQENNLKTLPPETTQLQKLKRLEWPCNNLEAIPVIITKFPKLKQLNLSFNQIKEIPESLS 112

Query: 90  KLSKLGTLDLHSN-QLKEYCVE-ACQLRLSVLDLS-NNSLSGLPPEIGKMTTLRKLLLTG 146
            L  L  LDL +N Q+KE     +  + L  LDLS N+ +  +P  +  +  L++L L G
Sbjct: 113 ALINLQQLDLSANHQIKEIPDSLSALINLQQLDLSANHQIKEIPDSLAALVNLQQLQLGG 172

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK--------EDLITMATRLSVTS 198
           NP++ +   L    +   L    + + E  DS A+             +  +   L+  S
Sbjct: 173 NPIKEIPYVLTTLVSLQQLHLNDTGIKEIPDSLAALVNLQQLYLYNNQIKEIPDSLAALS 232

Query: 199 --KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             + L L    +  IP  + +   + +LDL+ N I E+P   ++  +LQ L L  N+IK 
Sbjct: 233 NLQRLQLNFNRIKKIPDSLAKLASLQQLDLNINQISEIPDSFATLKNLQKLDLGSNQIKK 292

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
            PD+    L+SL  L L +N ++++P D F  +  LQ L+LS+N I  +P++  F++L +
Sbjct: 293 IPDS-FGKLASLQQLNLGSNQIKKIP-DSFGKLASLQQLNLSHNKIEEIPDS--FATLVN 348

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           LQ+LYL    ++E P  +  L  L+ L  S N ++ IP+    L +L +LD+S N I  +
Sbjct: 349 LQQLYLYNNPIKEVPDSLATLVNLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIKEI 408

Query: 376 PPELGLL 382
           P  L  L
Sbjct: 409 PDSLAAL 415



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 185/386 (47%), Gaps = 22/386 (5%)

Query: 18  LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN-RILSIPSSISGCCSLAEFYM 76
           +I  +  L +L  S N +  +PE++ +L  L +LDL  N +I  IP S+S   +L +  +
Sbjct: 87  IITKFPKLKQLNLSFNQIKEIPESLSALINLQQLDLSANHQIKEIPDSLSALINLQQLDL 146

Query: 77  -GNNALSALPAELGKLSKLGTLDLHSNQLKEY-CVEACQLRLSVLDLSNNSLSGLPPEIG 134
             N+ +  +P  L  L  L  L L  N +KE   V    + L  L L++  +  +P  + 
Sbjct: 147 SANHQIKEIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGIKEIPDSLA 206

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            +  L++L L  N ++ +  SL        L+   +R+ +  DS A              
Sbjct: 207 ALVNLQQLYLYNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLA----------- 255

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
             + ++L L    +S IP        + KLDL  N I+++P      ASLQ L L  N+I
Sbjct: 256 --SLQQLDLNINQISEIPDSFATLKNLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQI 313

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 313
           K  PD+    L+SL  L L +N + ++P D F  +  LQ L L  N I  +P++   ++L
Sbjct: 314 KKIPDS-FGKLASLQQLNLSHNKIEEIP-DSFATLVNLQQLYLYNNPIKEVPDS--LATL 369

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
            +LQ+L     Q++E P  +  L  L+ LD+S N ++ IP+    LT L  L LS   I+
Sbjct: 370 VNLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIKEIPDSLAALTHLQNLGLSSTQIT 429

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSI 399
            +P  L  L  +LQ L L  N ++ I
Sbjct: 430 EIPDFLSTL-VNLQQLNLSFNQIKKI 454



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 176/347 (50%), Gaps = 40/347 (11%)

Query: 81  LSALPAELGKLSKLGTL-------DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 132
           L ALP  +GKL+KL TL       +   N LK    E  QL +L  L+   N+L  +P  
Sbjct: 28  LDALPPAIGKLAKLETLILGKWNGEAQENNLKTLPPETTQLQKLKRLEWPCNNLEAIPVI 87

Query: 133 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED--------------- 177
           I K   L++L L+ N ++ +  SL      AL+   +  L  N                 
Sbjct: 88  ITKFPKLKQLNLSFNQIKEIPESL-----SALINLQQLDLSANHQIKEIPDSLSALINLQ 142

Query: 178 ----SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
               S     KE   ++A  +++  ++L L G  +  IP  +     + +L L+   I+E
Sbjct: 143 QLDLSANHQIKEIPDSLAALVNL--QQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGIKE 200

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           +P  L++  +LQ L L  N+IK+ PD+ L +LS+L  L+L+ N ++++P D    +  LQ
Sbjct: 201 IPDSLAALVNLQQLYLYNNQIKEIPDS-LAALSNLQRLQLNFNRIKKIP-DSLAKLASLQ 258

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            LDL+ N I+ +P++  F++L +LQ+L L   Q+++ P    +L  L+ L+L  N ++ I
Sbjct: 259 QLDLNINQISEIPDS--FATLKNLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQIKKI 316

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           P+ F  L SL +L+LS N I  +P     L  +LQ L L  NP++ +
Sbjct: 317 PDSFGKLASLQQLNLSHNKIEEIPDSFATL-VNLQQLYLYNNPIKEV 362



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 164/338 (48%), Gaps = 42/338 (12%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +A+   L +L    N +  +P+++ +LS L RL L+ NRI  IP S++   SL +  +  
Sbjct: 205 LAALVNLQQLYLYNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLASLQQLDLNI 264

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N +S +P     L  L  LDL SNQ+K+      +L  L  L+L +N +  +P   GK+ 
Sbjct: 265 NQISEIPDSFATLKNLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQIKKIPDSFGKLA 324

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +L++L L+ N                       ++ E  DS A+              V 
Sbjct: 325 SLQQLNLSHN-----------------------KIEEIPDSFATL-------------VN 348

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            ++L L    +  +P  +     + +L  S N I+E+P  L++  +LQ L +S N+IK+ 
Sbjct: 349 LQQLYLYNNPIKEVPDSLATLVNLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIKEI 408

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           PD+ L +L+ L  L L +  + ++P D    +  LQ L+LS+N I  +P++  F  L  L
Sbjct: 409 PDS-LAALTHLQNLGLSSTQITEIP-DFLSTLVNLQQLNLSFNQIKKIPDS--FVKLASL 464

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           Q LYL   Q+ + P+ +  L  L+ LDL  N +   PE
Sbjct: 465 QALYLCSNQITKIPSFLENLPALQKLDLRLNPIPVSPE 502



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 152/295 (51%), Gaps = 18/295 (6%)

Query: 110 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP--TPALLKY 167
           +A     + LDLS  +L  LPP IGK+  L  L+L         ++L   P  T  L K 
Sbjct: 12  QAAAEEWTELDLSGMNLDALPPAIGKLAKLETLILGKWNGEAQENNLKTLPPETTQLQKL 71

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
            R   P N + EA      +IT   +L    K+L+L    +  IP  +     + +LDLS
Sbjct: 72  KRLEWPCN-NLEAIPV---IITKFPKL----KQLNLSFNQIKEIPESLSALINLQQLDLS 123

Query: 228 RN-SIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
            N  I+E+P  LS+  +LQ L LS N +IK+ PD+ L +L +L  L+L  NP++++P   
Sbjct: 124 ANHQIKEIPDSLSALINLQQLDLSANHQIKEIPDS-LAALVNLQQLQLGGNPIKEIP--- 179

Query: 286 FKDIPMLQILDLSYNIASLPENP-PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
           +    ++ +  L  N   + E P   ++L +LQ+LYL   Q++E P  +  L  L+ L L
Sbjct: 180 YVLTTLVSLQQLHLNDTGIKEIPDSLAALVNLQQLYLYNNQIKEIPDSLAALSNLQRLQL 239

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           + N ++ IP+    L SL +LDL+ N IS +P     L+ +LQ L L  N ++ I
Sbjct: 240 NFNRIKKIPDSLAKLASLQQLDLNINQISEIPDSFATLK-NLQKLDLGSNQIKKI 293


>gi|351706806|gb|EHB09725.1| Leucine-rich repeat protein SHOC-2 [Heterocephalus glaber]
          Length = 571

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 185/388 (47%), Gaps = 42/388 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +     L  L  S+N L  +P+++ +L +L  LDL  N++  IPS + G  SL   Y+  
Sbjct: 131 VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYGLDSLTTLYLRF 190

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++ +  ++  LSKL  L +  N++K+   E   L  L  LD+++N L  LP EIG  T
Sbjct: 191 NRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGDLCNLITLDVAHNQLEHLPKEIGNCT 250

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            +  L L  N L  L  ++ N                                   LS  
Sbjct: 251 QITNLDLQHNELLDLPDTIGN-----------------------------------LSSL 275

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKD 256
           S+ L L    LSAIP  + +   + +L+L  N+I  LP   LSS   L +L L+RN  + 
Sbjct: 276 SR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQL 334

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
           +P    +  S++  L +++N + ++P   F    +L  L++  N + SLP +  F +   
Sbjct: 335 YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD--FGTWTS 392

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           + EL L   QL + P D+  L  L +L LS N L+ +P G  NL  L ELDL +N + +L
Sbjct: 393 MVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESL 452

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P E+  L+  LQ L L  N L ++ R I
Sbjct: 453 PNEIAYLK-DLQKLVLTNNQLTTLPRGI 479



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 349 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 408

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 409 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 468

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 469 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 498



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 149/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 232 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPR 290

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 291 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 350

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 351 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 410

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 411 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 457

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 458 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 512

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 513 ----LNDNPNLHSLP 523



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 90/180 (50%), Gaps = 5/180 (2%)

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
           S++   L ++P+E+     +  L LS NS+  LP  L +   L+ L L  NK+++ P ++
Sbjct: 118 SIKXNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIP-SV 176

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 320
           +  L SL+ L L  N +  V  D  K++  L +L +  N I  LP       L +L  L 
Sbjct: 177 VYGLDSLTTLYLRFNRITTVEKD-IKNLSKLSMLSIRENKIKQLPAE--IGDLCNLITLD 233

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           +   QL   P +I    Q+  LDL  N L  +P+   NL+SL+ L L  N +SA+P  L 
Sbjct: 234 VAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLA 293



 Score = 38.5 bits (88), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           H+    ++  +L+  P ++  L  L  L LS+NSL S+P+   NL  L  LDL  N +  
Sbjct: 113 HILPSSIKXNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 172

Query: 375 LPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
           +P  +  L+ SL  L L  N + ++ + I +    ++L   ++KI +
Sbjct: 173 IPSVVYGLD-SLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQ 218


>gi|418694701|ref|ZP_13255735.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409957466|gb|EKO16373.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 425

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 191/370 (51%), Gaps = 20/370 (5%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+  L  +P  IG L  L RL LH N++  +P  I    +L   Y+ +N L+ LP E+ +
Sbjct: 56  SRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQ 115

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL SNQL     E  QL+ L +L L +N L+ L  +I ++  L+ L L+ N L
Sbjct: 116 LKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQL 175

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
            TL + +        LK L+S L  +E+  A+  KE  I     L V    L L    ++
Sbjct: 176 TTLPNEI------EQLKNLKS-LYLSENQFATFPKE--IGQLQNLKV----LFLNNNQIT 222

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P+EI +  ++  L LS N +  LP E+    +LQTL LS N+ K  P  I   L +L 
Sbjct: 223 ILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQFKIIPKEI-GQLENLQ 281

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
            L L NN L+ +P +  + +  LQ L LS N +  LP+      L +L  L L   QL  
Sbjct: 282 TLDLRNNQLKTLPKE-IEQLKNLQTLFLSNNQLTILPQ--EIGKLKNLLWLSLVYNQLTT 338

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
            P +I +L+ L++L+   N + ++ +    L +L  L L++N ++ LP E+G L+ +L+ 
Sbjct: 339 LPNEIEQLKNLQVLNFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLK-NLKK 397

Query: 389 LRLDGNPLRS 398
           L L+ + L S
Sbjct: 398 LYLNNHQLSS 407



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 164/355 (46%), Gaps = 43/355 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L+L +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 53  LELSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 112

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 113 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI------------- 159

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 160 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 196

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 197 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 254

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ LDLSYN    +P+      L +LQ L LR  QL+  P +I +L+ L+ L LS N 
Sbjct: 255 KNLQTLDLSYNQFKIIPK--EIGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 312

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L  +P+    L +L  L L  N ++ LP E+  L+ +LQ L    N + ++ + I
Sbjct: 313 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK-NLQVLNFGSNQITTLSQEI 366



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 120/279 (43%), Gaps = 39/279 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  
Sbjct: 165 LKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI 223

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I+    L   Y+ +N L  LP E+ +L  L TLDL  NQ K    E  QL  L  L
Sbjct: 224 LPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQFKIIPKEIGQLENLQTL 283

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL NN L  LP EI ++  L+ L L+ N L  L   +  G    LL              
Sbjct: 284 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEI--GKLKNLL-------------- 327

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                LSL    L+ +P+EI +   +  L+   N I  L  E+ 
Sbjct: 328 --------------------WLSLVYNQLTTLPNEIEQLKNLQVLNFGSNQITTLSQEIG 367

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
              +L+ L L+ N++   P  I   L +L  L L+N+ L
Sbjct: 368 QLQNLKVLFLNNNQLTTLPKEI-GQLKNLKKLYLNNHQL 405


>gi|195349129|ref|XP_002041099.1| GM15368 [Drosophila sechellia]
 gi|261277895|sp|B4IBI9.1|SUR8_DROSE RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194122704|gb|EDW44747.1| GM15368 [Drosophila sechellia]
          Length = 683

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 197/410 (48%), Gaps = 20/410 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  + +TV+ +  +     LTEL    N +  +P  IG L  L  L L++N + S
Sbjct: 165 IKRLDLSKSSITVIPST-VKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTS 223

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S+  C  L    + +N L+ +P+ + +L  L TL L  N++     +  QL  L++L
Sbjct: 224 LPESLQNCSQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 283

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N +  L   IG +  L  L ++ N L  L   + N    + L    + L +  DS 
Sbjct: 284 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 343

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-L 238
            +   + L+ +  R +            LS++P+ +     + + ++  N I +LP   L
Sbjct: 344 GNL--KSLVRLGMRYN-----------RLSSVPATLKNCKSMDEFNVEGNGITQLPDGML 390

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +S + L T+ LSRN+   +P       +++  + L++N + ++P   F     L  L++ 
Sbjct: 391 ASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMK 450

Query: 299 YNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N+  +LP +    +  ++ EL L    L++ P DI+ LQ L IL LS N L+ IP    
Sbjct: 451 ENMLTALPLD--IGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 508

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
           NL  L  LDL +N I  LP E+GLL   LQ L L  N +  + R+I   G
Sbjct: 509 NLRRLRILDLEENRIEVLPHEIGLLH-ELQRLILQTNQITMLPRSIGHLG 557



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 200/430 (46%), Gaps = 47/430 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L  L  ++N L  +PE++ + S+L  LDL  N++  IPS I    SL   Y+  
Sbjct: 205 IGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRF 264

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++A+  +L +L  L  L L  N+++E       L  L+ LD+S+N L  LP +IG   
Sbjct: 265 NRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCV 324

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L  +  S+ N     L   +R  +  N  S    T ++  +M       
Sbjct: 325 NLSALDLQHNELLDIPDSIGN-----LKSLVRLGMRYNRLSSVPATLKNCKSM------- 372

Query: 198 SKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIK 255
             E ++EG  ++ +P  +  +   +T + LSRN     P    +   ++ ++ L  N+I 
Sbjct: 373 -DEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRID 431

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             P  I +    L+ L +  N L  +P D    + M++ L+L+ N +  LP++    +L 
Sbjct: 432 KIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE-LNLATNALQKLPDD--IMNLQ 488

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-------------------- 354
           +L+ L L    L++ P  I  L++LRILDL +N ++ +P                     
Sbjct: 489 NLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITM 548

Query: 355 ---GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAV 411
                 +L +LT L +S+NN+  LP E+G LE SL+ L ++ NP   + +   +      
Sbjct: 549 LPRSIGHLGNLTHLSVSENNLQFLPEEIGSLE-SLENLYINQNP--GLEKLPFELALCQN 605

Query: 412 LKYLK-DKIP 420
           LKYL  DK P
Sbjct: 606 LKYLNIDKCP 615



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 68/148 (45%), Gaps = 23/148 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M +L++  N L  L ++ I +   L  LI S N+L  +P TIG+L RL  LDL +NRI  
Sbjct: 467 MVELNLATNALQKLPDD-IMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEV 525

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P  I     L    +  N ++ LP  +G L                        L+ L 
Sbjct: 526 LPHEIGLLHELQRLILQTNQITMLPRSIGHLGN----------------------LTHLS 563

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
           +S N+L  LP EIG + +L  L +  NP
Sbjct: 564 VSENNLQFLPEEIGSLESLENLYINQNP 591



 Score = 45.8 bits (107), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           R + ++ LDLS++S+  IP   K    LTEL L  N I  LPPE+G L  SL+ L L+ N
Sbjct: 161 RDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCL-VSLRNLALNEN 219

Query: 395 PLRSIRRTILDRGTKAVLKYLKDKIPE 421
            L S+  ++ +     VL    +K+ E
Sbjct: 220 SLTSLPESLQNCSQLKVLDLRHNKLAE 246


>gi|427736832|ref|YP_007056376.1| hypothetical protein Riv7116_3370 [Rivularia sp. PCC 7116]
 gi|427371873|gb|AFY55829.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 421

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 121/373 (32%), Positives = 172/373 (46%), Gaps = 48/373 (12%)

Query: 15  SNNLIASW-------TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           SNNLI S+       T L  L    N LN +PE IG+L+ L  LDL  N++  +P     
Sbjct: 71  SNNLIKSFPLGIAKLTNLKVLSLDDNYLNNLPEEIGNLNNLEYLDLSNNQLNQLPPEFGK 130

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 126
              L E  +  N L++LP E G+LSKL  LDL  N+L     E  +L  L  +DL NN L
Sbjct: 131 LIKLQELCLEGNQLTSLPCEFGQLSKLKELDLLENELTYLPEEFGKLINLQKVDLGNNKL 190

Query: 127 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 186
             LP EIG++  L  L +  N L +L   L       L K  +  L  N+ S+   ++  
Sbjct: 191 ITLPKEIGQLANLELLEIGENQLTSLPPEL-----GKLSKLKQLNLSVNQLSDLPLSQAK 245

Query: 187 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
           LI + T        L L     + +P+EI     +  L + +N +  L PE+   ++L+ 
Sbjct: 246 LINLKT--------LYLCSNQFTKLPAEISRLTNLKSLYVIQNQLNNLTPEIGQLSNLEL 297

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 306
           L +S NK+   P  I   L+SL    L+ N L  +P +                      
Sbjct: 298 LDISENKLNSLPTEI-EKLTSLRYFILNVNHLSNLPKE---------------------- 334

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +L  L L+  QL   PT+I +L  L  L LS+N + ++P   K LT L  LD
Sbjct: 335 ---IGHLTNLVTLNLQENQLTTLPTEIEKLMNLEYLFLSENKISNLPIEIKQLTKLKHLD 391

Query: 367 LSDNNISALPPEL 379
           LS N IS +PPE+
Sbjct: 392 LSKNPIS-IPPEI 403



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 169/380 (44%), Gaps = 41/380 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           LT L  S   L+ +P+ I  L  L  L L  N +  +P  I     L    + NN + + 
Sbjct: 19  LTTLNLSGEDLHFLPKEIKKLPNLEYLYLGNNHLTELPEEIEQLKKLKLLDLSNNLIKSF 78

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  + KL+ L  L L  N L     E   L  L  LDLSNN L+ LPPE GK+  L++L 
Sbjct: 79  PLGIAKLTNLKVLSLDDNYLNNLPEEIGNLNNLEYLDLSNNQLNQLPPEFGKLIKLQELC 138

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L GN L +L         P     L S+L                          KEL L
Sbjct: 139 LEGNQLTSL---------PCEFGQL-SKL--------------------------KELDL 162

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
               L+ +P E  +   + K+DL  N +  LP E+   A+L+ L +  N++   P   L 
Sbjct: 163 LENELTYLPEEFGKLINLQKVDLGNNKLITLPKEIGQLANLELLEIGENQLTSLPPE-LG 221

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L  L L  N L  +P    K I +  +   S     LP     S L +L+ LY+ +
Sbjct: 222 KLSKLKQLNLSVNQLSDLPLSQAKLINLKTLYLCSNQFTKLP--AEISRLTNLKSLYVIQ 279

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            QL     +I +L  L +LD+S+N L S+P   + LTSL    L+ N++S LP E+G L 
Sbjct: 280 NQLNNLTPEIGQLSNLELLDISENKLNSLPTEIEKLTSLRYFILNVNHLSNLPKEIGHL- 338

Query: 384 PSLQALRLDGNPLRSIRRTI 403
            +L  L L  N L ++   I
Sbjct: 339 TNLVTLNLQENQLTTLPTEI 358



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 79/154 (51%), Gaps = 1/154 (0%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+  T L  L   +N LN +   IG LS L  LD+ +N++ S+P+ I    SL  F +  
Sbjct: 266 ISRLTNLKSLYVIQNQLNNLTPEIGQLSNLELLDISENKLNSLPTEIEKLTSLRYFILNV 325

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N LS LP E+G L+ L TL+L  NQL     E  +L  L  L LS N +S LP EI ++T
Sbjct: 326 NHLSNLPKEIGHLTNLVTLNLQENQLTTLPTEIEKLMNLEYLFLSENKISNLPIEIKQLT 385

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 171
            L+ L L+ NP+      L   P   L  Y  S 
Sbjct: 386 KLKHLDLSKNPISIPPEILKEKPQKILNCYFTSH 419


>gi|332023058|gb|EGI63323.1| Protein lap4 [Acromyrmex echinatior]
          Length = 2051

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 181/389 (46%), Gaps = 43/389 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL+   N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +  L  L   D  SN +        QLR L+VL L++ SL+ LP + G +  L+ L 
Sbjct: 99  PENIKNLQALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPSDFGSLEALQSLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L++L  SL       LLK  R  L +NE                           
Sbjct: 159 LRENLLKSLPESLSQ-----LLKLERLDLGDNE--------------------------- 186

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
               +  +P+ I +   + +L L  N +Q LPPE+    +L  L +S N+++D PD I  
Sbjct: 187 ----IEELPAHIGQLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPDEI-G 241

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
            L SL+ L L  N + ++P DG  ++  L IL +  N +++L  NP      +LQEL L 
Sbjct: 242 GLESLTDLHLSQNVIEKLP-DGLGELKKLTILKIDQNRLSTL--NPNIGRCENLQELILT 298

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
              L E P  I +L  L  L++ +NSLQS+P    NL  L  L L DN +  LP E+G  
Sbjct: 299 ENFLLELPLSIGKLYNLNNLNVDRNSLQSLPIEIGNLKKLGVLSLRDNKLQYLPIEVGQC 358

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAV 411
             +L  L + GN L  +  ++++   KAV
Sbjct: 359 S-ALHVLDVSGNRLHYLPYSLINLNLKAV 386



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 119/255 (46%), Gaps = 46/255 (18%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S + +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRSLEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEIHRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAI----------------------LTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
            I D P+ I                         L +L+ L L++  L  +PSD F  + 
Sbjct: 94  DIPDIPENIKNLQALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPSD-FGSLE 152

Query: 291 MLQILDLSYN-IASLPEN---------------------PPFSSLPHLQELYLRRMQLRE 328
            LQ L+L  N + SLPE+                          LP LQEL+L   QL+ 
Sbjct: 153 ALQSLELRENLLKSLPESLSQLLKLERLDLGDNEIEELPAHIGQLPALQELWLDHNQLQH 212

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
            P +I  L+ L  LD+S+N L+ +P+    L SLT+L LS N I  LP  LG L+  L  
Sbjct: 213 LPPEIGELKTLACLDVSENRLEDLPDEIGGLESLTDLHLSQNVIEKLPDGLGELK-KLTI 271

Query: 389 LRLDGNPLRSIRRTI 403
           L++D N L ++   I
Sbjct: 272 LKIDQNRLSTLNPNI 286



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 159/353 (45%), Gaps = 41/353 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +PE I +L  L   D   N I  +P+      +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPENIKNLQALQVADFSSNPIPRLPAGFVQLRNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LP++ G L  L +L+L  N LK       Q L+L  LDL +N +  LP  IG++ 
Sbjct: 139 MSLTNLPSDFGSLEALQSLELRENLLKSLPESLSQLLKLERLDLGDNEIEELPAHIGQLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L++L L  N L+ L   +    T A L    +RL            EDL      L   
Sbjct: 199 ALQELWLDHNQLQHLPPEIGELKTLACLDVSENRL------------EDLPDEIGGLESL 246

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           + +L L    +  +P  + E  ++T L + +N +  L P +  C +LQ LIL+ N + + 
Sbjct: 247 T-DLHLSQNVIEKLPDGLGELKKLTILKIDQNRLSTLNPNIGRCENLQELILTENFLLEL 305

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P +I   L +L+ L +D N L+ +P +                           +L  L 
Sbjct: 306 PLSI-GKLYNLNNLNVDRNSLQSLPIE-------------------------IGNLKKLG 339

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
            L LR  +L+  P ++ +   L +LD+S N L  +P    NL +L  + LS+N
Sbjct: 340 VLSLRDNKLQYLPIEVGQCSALHVLDVSGNRLHYLPYSLINL-NLKAVWLSEN 391



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L+ L+ N I     L ELI ++N L  +P +IG L  L  L++ +N + S+P 
Sbjct: 272 LKIDQNRLSTLNPN-IGRCENLQELILTENFLLELPLSIGKLYNLNNLNVDRNSLQSLPI 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I     L    + +N L  LP E+G+ S L  LD+  N+L         L L  + LS 
Sbjct: 331 EIGNLKKLGVLSLRDNKLQYLPIEVGQCSALHVLDVSGNRLHYLPYSLINLNLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|293357166|ref|XP_002729094.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like, partial [Rattus norvegicus]
          Length = 590

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 191/412 (46%), Gaps = 46/412 (11%)

Query: 11  LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 70
           LT + + +  S   L  L  S+N L  +P+ I + ++L  + L QN   + P  +   C+
Sbjct: 160 LTEVPSGICKSLHHLELLGLSENYLESLPKEIVNQTKLREIYLKQNHFENFPCDLCVLCN 219

Query: 71  LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG 128
           L    + +N L  +P ++G L +L    + SN L      +  C+ +LSVLDL++NS+  
Sbjct: 220 LEVIDLDDNKLKTIPEDIGHLVRLQKFYVASNHLMGLPESLSHCR-KLSVLDLTHNSIHS 278

Query: 129 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 188
           LP  + ++T L ++ L+GN L  +   L N  +  LL YLR+                  
Sbjct: 279 LPYSLEQLTELTEVGLSGNRLEKVPRLLCNWVSLHLL-YLRNT----------------- 320

Query: 189 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 248
                        SL G+  S           +  LDLS+N I   P ++ +   L+ L 
Sbjct: 321 -------------SLHGLRRS-----FKHLVNLRFLDLSQNHIDHFPVQICTLKDLEILA 362

Query: 249 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL---DLSYNIASLP 305
           L  NK+K  P AI +SLS L  L L  N     P + F  + + ++    D    ++SLP
Sbjct: 363 LDDNKVKQLPPAI-SSLSKLKILGLTGNDFVSFPEEIFSLVSLEKLYIGQDQGSKLSSLP 421

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
           EN     L +L+ELY+   QL + P  +  +  L +LD   N L+ +P+       L EL
Sbjct: 422 EN--IKKLTNLKELYIENNQLEQLPASLGLMPNLEVLDCRHNLLRQLPDAICQTRDLREL 479

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
            L DN +S LP  L  L  +L+ L L  N +      + ++G +A+ ++LK+
Sbjct: 480 LLEDNLLSRLPENLDHL-VNLKVLTLTDNLMEDPPMEVCEQGNEAIWRHLKE 530



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 173/416 (41%), Gaps = 67/416 (16%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  I +L  L  + L  N+I  IP  I     +   Y+ NN+L  L  ELG LS L
Sbjct: 67  LKTIPPEILALKELEEVHLENNQISEIPQGIQHLEKIKVLYLHNNSLQNLCQELGSLSNL 126

Query: 95  GTLDLHSN-----QLKEYCVEA-------------------CQ--LRLSVLDLSNNSLSG 128
            +LDL  N      L+  C                      C+    L +L LS N L  
Sbjct: 127 ESLDLSGNLLVLSSLQVICRLRTLRELRLYNTGLTEVPSGICKSLHHLELLGLSENYLES 186

Query: 129 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 188
           LP EI   T LR++ L  N        L       ++          +D++  T  ED I
Sbjct: 187 LPKEIVNQTKLREIYLKQNHFENFPCDLCVLCNLEVIDL--------DDNKLKTIPED-I 237

Query: 189 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 248
               RL    ++  +   +L  +P  +    +++ LDL+ NSI  LP  L     L  + 
Sbjct: 238 GHLVRL----QKFYVASNHLMGLPESLSHCRKLSVLDLTHNSIHSLPYSLEQLTELTEVG 293

Query: 249 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-------- 300
           LS N+++  P  +L +  SL  L L N  L  +    FK +  L+ LDLS N        
Sbjct: 294 LSGNRLEKVP-RLLCNWVSLHLLYLRNTSLHGL-RRSFKHLVNLRFLDLSQNHIDHFPVQ 351

Query: 301 --------IASLPEN------PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
                   I +L +N      P  SSL  L+ L L        P +I  L  L  L + Q
Sbjct: 352 ICTLKDLEILALDDNKVKQLPPAISSLSKLKILGLTGNDFVSFPEEIFSLVSLEKLYIGQ 411

Query: 347 NS---LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           +    L S+PE  K LT+L EL + +N +  LP  LGL+ P+L+ L    N LR +
Sbjct: 412 DQGSKLSSLPENIKKLTNLKELYIENNQLEQLPASLGLM-PNLEVLDCRHNLLRQL 466



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 2/71 (2%)

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           N+ ++P  P   +L  L+E++L   Q+ E P  I  L+++++L L  NSLQ++ +   +L
Sbjct: 66  NLKTIP--PEILALKELEEVHLENNQISEIPQGIQHLEKIKVLYLHNNSLQNLCQELGSL 123

Query: 360 TSLTELDLSDN 370
           ++L  LDLS N
Sbjct: 124 SNLESLDLSGN 134


>gi|417781513|ref|ZP_12429262.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778244|gb|EKR62873.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 348

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 182/343 (53%), Gaps = 19/343 (5%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S ++ N + +++ + S +  LD+    + ++P  I    +L +  +  N L+A+P E+GK
Sbjct: 2   SHSIHNNLEKSLQNPSEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGK 61

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L TL L  N LK    E  QL+ L+ LDL  N L  LP EIGK+  L++L L+GN L
Sbjct: 62  LRNLETLILAENILKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQL 121

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
             L  S+       +L+  R++L        +T  E+++ + + L +    L+L    + 
Sbjct: 122 TVLPPSIGQLQNLEILELFRNQL--------ATLPEEIVGLKS-LQI----LNLFENEIK 168

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
           ++P EI +   +  LDL +N I+ L  +     +L++L L  NK++++P A +  L SL 
Sbjct: 169 SLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFP-ADIVQLKSLE 227

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
            L L+ N  + +P +  + +  LQ+L+L+ N + SLPE      L  L+ L+L   +L  
Sbjct: 228 FLNLNYNRFKILPEEILQ-LENLQVLELTGNQLTSLPEG--IGRLEKLESLFLEGNRLTT 284

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
            P  I  L+ L+I+ L QN L +IPE   +L +L EL L D N
Sbjct: 285 LPKGIEHLRSLKIVHLEQNRLTAIPEEIGSLQNLKELYLQDFN 327



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 150/324 (46%), Gaps = 43/324 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL + GN+LT +    I     L  LI ++N+L  +P  I  L  L  LDL++N++  
Sbjct: 42  LEKLILFGNRLTAIPKE-IGKLRNLETLILAENILKTIPNEIEQLQNLATLDLYENKLKV 100

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E  +  N L+ LP  +G+L  L  L+L  NQL     E   L+ L +L
Sbjct: 101 LPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQLATLPEEIVGLKSLQIL 160

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L  N +  LP EI +++ L  L L  N ++ L            L + R +        
Sbjct: 161 NLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLS-----------LDFKRLQ-------- 201

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              K L+L    L   P++I +   +  L+L+ N  + LP E+ 
Sbjct: 202 -----------------NLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEIL 244

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +LQ L L+ N++   P+ I   L  L  L L+ N L  +P  G + +  L+I+ L  
Sbjct: 245 QLENLQVLELTGNQLTSLPEGI-GRLEKLESLFLEGNRLTTLPK-GIEHLRSLKIVHLEQ 302

Query: 300 N-IASLPENPPFSSLPHLQELYLR 322
           N + ++PE     SL +L+ELYL+
Sbjct: 303 NRLTAIPE--EIGSLQNLKELYLQ 324



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 86/161 (53%), Gaps = 5/161 (3%)

Query: 220 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
           E+  LD+S   ++ LP E+ +  +L+ LIL  N++   P  I   L +L  L L  N L+
Sbjct: 18  EVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEI-GKLRNLETLILAENILK 76

Query: 280 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
            +P++  + +  L  LDL  N +  LP       L +L+EL L   QL   P  I +LQ 
Sbjct: 77  TIPNE-IEQLQNLATLDLYENKLKVLPN--EIGKLENLKELNLSGNQLTVLPPSIGQLQN 133

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
           L IL+L +N L ++PE    L SL  L+L +N I +LP E+
Sbjct: 134 LEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEI 174


>gi|421118974|ref|ZP_15579301.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348314|gb|EKO99140.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 379

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 170/350 (48%), Gaps = 43/350 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 166

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           S                              L+L    +  IP EI +  ++  L L  N
Sbjct: 167 S------------------------------LNLSYNQIKTIPKEIEKLQKLQSLGLDNN 196

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP E+    +LQ+L L  N++   P  I   L +L  L L +N L  +P++    +
Sbjct: 197 QLTTLPQEIGQLQNLQSLYLPNNQLTTLPQEI-GHLQNLQDLYLVSNQLTILPNE-IGQL 254

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ L+L  N + +L +      L +L+ L LR  QL   P +I +L+ L++LDL  N 
Sbjct: 255 KNLQTLNLRNNRLTTLSK--EIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQ 312

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L ++PEG   L +L  LDL  N ++ LP E+G L+ +LQ L L+ N L S
Sbjct: 313 LTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQ-NLQELFLNNNQLSS 361



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 159/328 (48%), Gaps = 26/328 (7%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+   L    I     L EL  +KN L  +P+ IG L  L +L+L  N+I +IP 
Sbjct: 53  LDLSANRFKTLPKE-IGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L   Y+ NN L+ LP E+G+L KL  L L  NQL     E  QL+ L  L+LS
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAS 181
            N +  +P EI K+  L+ L L  N L TL   +        L+ L+S  LP N+     
Sbjct: 172 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI------GQLQNLQSLYLPNNQ----- 220

Query: 182 TTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                L T+   +      ++L L    L+ +P+EI +   +  L+L  N +  L  E+ 
Sbjct: 221 -----LTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIE 275

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L++L L  N++  +P  I   L +L  L L +N L  +P +G   +  LQ LDL  
Sbjct: 276 QLQNLKSLDLRSNQLTTFPKEI-EQLKNLQVLDLGSNQLTTLP-EGIGQLKNLQTLDLDS 333

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQL 326
           N + +LP+      L +LQEL+L   QL
Sbjct: 334 NQLTTLPQ--EIGQLQNLQELFLNNNQL 359



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 109/228 (47%), Gaps = 29/228 (12%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+SE+ T  +    +   L V  + L L       +P EI +   + +L+L++N +  LP
Sbjct: 30  EESESGTYTDLAKALQNPLKV--RTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +L+ L LS N+IK  P  I   L  L  L L NN L  +P +           
Sbjct: 88  KEIGQLKNLRKLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQE----------- 135

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
                            L  LQ LYL + QL   P +I +L+ L+ L+LS N +++IP+ 
Sbjct: 136 --------------IGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKE 181

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            + L  L  L L +N ++ LP E+G L+ +LQ+L L  N L ++ + I
Sbjct: 182 IEKLQKLQSLGLDNNQLTTLPQEIGQLQ-NLQSLYLPNNQLTTLPQEI 228



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ +
Sbjct: 280 LKSLDLRSNQLTTFPKE-IEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTT 338

Query: 61  IPSSISGCCSLAEFYMGNNALSA 83
           +P  I    +L E ++ NN LS+
Sbjct: 339 LPQEIGQLQNLQELFLNNNQLSS 361


>gi|421117624|ref|ZP_15577983.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010838|gb|EKO68970.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 377

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 117/350 (33%), Positives = 168/350 (48%), Gaps = 43/350 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 51  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 110

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 111 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 164

Query: 170 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 165 SLNLSYNQIKTIPKEIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 216

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  +     K+
Sbjct: 217 NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTLS----KE 271

Query: 289 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
           I  LQ                     +L+ L LR  QL   P +I +L+ L+ L+L  N 
Sbjct: 272 IEQLQ---------------------NLKSLDLRSNQLTTFPKEIGQLKNLQTLNLGSNQ 310

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L ++PEG   L +L  LDL  N ++ LP E+G L+ +LQ L L+ N L S
Sbjct: 311 LTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQ-NLQELFLNNNQLSS 359



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 157/327 (48%), Gaps = 24/327 (7%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+   L    I     L EL  +KN L  +P+ IG L  L +L+L  N+I +IP 
Sbjct: 51  LDLSANRFKTLPKE-IGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 109

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L   Y+ NN L+ LP E+G+L KL  L L  NQL     E  QL+ L  L+LS
Sbjct: 110 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 169

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N +  +P EI K+  L+ L L  N L TL   +              +L   +  + ST
Sbjct: 170 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI-------------GQLQNLQSLDLST 216

Query: 183 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
            +  L T+   +      ++L L    L+ +P+EI +   +  L+L  N +  L  E+  
Sbjct: 217 NR--LTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQ 274

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             +L++L L  N++  +P  I   L +L  L L +N L  +P +G   +  LQ LDL  N
Sbjct: 275 LQNLKSLDLRSNQLTTFPKEI-GQLKNLQTLNLGSNQLTTLP-EGIGQLKNLQTLDLDSN 332

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQL 326
            + +LP+      L +LQEL+L   QL
Sbjct: 333 QLTTLPQ--EIGQLQNLQELFLNNNQL 357



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 144/288 (50%), Gaps = 21/288 (7%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RL 172
           L++ +LDLS N    LP EIGK+  L++L L  N L  L   +        LK LR   L
Sbjct: 46  LKVRILDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEI------GQLKNLRKLNL 99

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
             N+        E L  + +        L L    L+ +P EI +  ++  L L +N + 
Sbjct: 100 SANQIKTIPKEIEKLQKLQS--------LYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT 151

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            LP E+    +L++L LS N+IK  P  I   L  L  L LDNN L  +P +    +  L
Sbjct: 152 TLPQEIGQLKNLKSLNLSYNQIKTIPKEI-EKLQKLQSLGLDNNQLTTLPQE-IGQLQNL 209

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           Q LDLS N + +LP+      L +LQ+LYL   QL   P +I +L+ L+ L+L  N L +
Sbjct: 210 QSLDLSTNRLTTLPQ--EIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTT 267

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           + +  + L +L  LDL  N ++  P E+G L+ +LQ L L  N L ++
Sbjct: 268 LSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLK-NLQTLNLGSNQLTTL 314



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 114/221 (51%), Gaps = 7/221 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E   T +DL T A +  +  + L L       +P EI +   + +L+L++N +  LP 
Sbjct: 28  QAEEPGTYQDL-TKALQNPLKVRILDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPK 86

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    +L+ L LS N+IK  P  I   L  L  L L NN L  +P +    +  LQ L 
Sbjct: 87  EIGQLKNLRKLNLSANQIKTIPKEI-EKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWLY 144

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N + +LP+      L +L+ L L   Q++  P +I +LQ+L+ L L  N L ++P+ 
Sbjct: 145 LPKNQLTTLPQ--EIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQE 202

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
              L +L  LDLS N ++ LP E+G L+ +LQ L L  N L
Sbjct: 203 IGQLQNLQSLDLSTNRLTTLPQEIGHLQ-NLQDLYLVSNQL 242



 Score = 45.1 bits (105), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 44/66 (66%), Gaps = 1/66 (1%)

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
           ++RILDLS N  +++P+    L +L EL+L+ N ++ LP E+G L+ +L+ L L  N ++
Sbjct: 47  KVRILDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLK-NLRKLNLSANQIK 105

Query: 398 SIRRTI 403
           +I + I
Sbjct: 106 TIPKEI 111



 Score = 45.1 bits (105), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ +
Sbjct: 278 LKSLDLRSNQLTTFPKE-IGQLKNLQTLNLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTT 336

Query: 61  IPSSISGCCSLAEFYMGNNALSA 83
           +P  I    +L E ++ NN LS+
Sbjct: 337 LPQEIGQLQNLQELFLNNNQLSS 359


>gi|308451071|ref|XP_003088533.1| hypothetical protein CRE_29288 [Caenorhabditis remanei]
 gi|308478403|ref|XP_003101413.1| hypothetical protein CRE_13532 [Caenorhabditis remanei]
 gi|308246970|gb|EFO90922.1| hypothetical protein CRE_29288 [Caenorhabditis remanei]
 gi|308263314|gb|EFP07267.1| hypothetical protein CRE_13532 [Caenorhabditis remanei]
          Length = 559

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 227/461 (49%), Gaps = 49/461 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKLT L    I     L +L  S+N L+ +P+++ SL  L  LDL  N++  
Sbjct: 98  LTELFLYKNKLTCLPTE-IGQLVNLKKLGLSENALSSLPDSLASLESLETLDLRHNKLTE 156

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------------YC 108
           +PS I    SL   ++  N + A+  ++G L KL  LD+  N+++E             C
Sbjct: 157 VPSVIYKINSLETLWLRYNRIVAVDEQIGNLVKLKMLDVRENKIRELPSAIGKLTSLVVC 216

Query: 109 -------------VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
                        +  C L L+ LDL +N LS LP  IGK+T L ++ +  N +R + S 
Sbjct: 217 LVSYNHLTRVPEEIGEC-LSLTQLDLQHNDLSELPYSIGKLTNLVRIGIRYNKIRCIPSE 275

Query: 156 LVNGPTPALLKYLRSR-----LPEN------EDSEASTTKEDLITM---ATRLSVTSKEL 201
           L +     L +++        LP N      +    + ++ +L        +  V++  +
Sbjct: 276 LES--CQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTI 333

Query: 202 SLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           ++E   +S IP  I+ +A  +TKL+L  N +  LP ++ S  S+  L LS N++K  P+ 
Sbjct: 334 NMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPED 393

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 320
           I   L +L  L L NN L+++P+       + ++      + ++P    F  L HL +L+
Sbjct: 394 I-EKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEENELETVPTEIGF--LQHLTKLW 450

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 379
           ++  ++   P  I  L  L+ L L +N+L +IPE   +L SL  L L+DN ++  LP EL
Sbjct: 451 IQSNKIITLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFEL 510

Query: 380 GLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            L + SL+ + ++ +PL  I   I   G   V++YLK + P
Sbjct: 511 ALCQ-SLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGP 550



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 174/364 (47%), Gaps = 39/364 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   T LTEL   KN L  +P  IG L  L +L L +N + S+P S++   SL    + +
Sbjct: 92  IKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALSSLPDSLASLESLETLDLRH 151

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+ +P+ + K++ L TL L  N++     +   L +L +LD+  N +  LP  IGK+T
Sbjct: 152 NKLTEVPSVIYKINSLETLWLRYNRIVAVDEQIGNLVKLKMLDVRENKIRELPSAIGKLT 211

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +L   L++ N L                    +R+PE               +   LS+T
Sbjct: 212 SLVVCLVSYNHL--------------------TRVPEE--------------IGECLSLT 237

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             +L L+  +LS +P  I +   + ++ +  N I+ +P EL SC  L+  I+  N ++  
Sbjct: 238 --QLDLQHNDLSELPYSIGKLTNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLL 295

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P  +LT L  +  + L  N L   P+ G +       +++ +N I+ +P    FS    L
Sbjct: 296 PPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIG-IFSKATRL 354

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
            +L L+  +L   P D+     +  L+LS N L+ +PE  + L +L  L LS+N +  LP
Sbjct: 355 TKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLP 414

Query: 377 PELG 380
            ++G
Sbjct: 415 NQIG 418



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 112/202 (55%), Gaps = 6/202 (2%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           + L L  + +++IPS I E  ++T+L L +N +  LP E+    +L+ L LS N +   P
Sbjct: 76  QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALSSLP 135

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
           D+ L SL SL  L L +N L +VPS  +K I  L+ L L YN I ++ E     +L  L+
Sbjct: 136 DS-LASLESLETLDLRHNKLTEVPSVIYK-INSLETLWLRYNRIVAVDEQ--IGNLVKLK 191

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++RE P+ I +L  L +  +S N L  +PE      SLT+LDL  N++S LP 
Sbjct: 192 MLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECLSLTQLDLQHNDLSELPY 251

Query: 378 ELGLLEPSLQALRLDGNPLRSI 399
            +G L  +L  + +  N +R I
Sbjct: 252 SIGKLT-NLVRIGIRYNKIRCI 272


>gi|398339753|ref|ZP_10524456.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 448

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 190/419 (45%), Gaps = 65/419 (15%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G+KL  LS   I     L +L  + N L  +P  IG L  L  LDL+ N +  +P 
Sbjct: 53  LNLSGSKLATLSKE-IGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPK 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL------------------- 104
            I    +L    +G N L+ LP E+G+L  L  L+L  N+L                   
Sbjct: 112 EIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLN 171

Query: 105 -KEYCV---EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 159
             +  +   +  QL+ L +L+   N L+  P EIG++  L++L L  N L TLR  +V  
Sbjct: 172 LNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQL 231

Query: 160 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 219
               +L  +         S   TT    I    +L    +EL+L G+ L  +P  I +  
Sbjct: 232 QNLQILDLI---------SNPLTTLPKEIGQLQKL----QELNLYGIQLKTLPQGIIQLQ 278

Query: 220 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
            +  L+L+   +  LP E+   + LQ L L  N++   P+ I   L  L  L L NNPLR
Sbjct: 279 NLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEI-GQLKKLQELYLGNNPLR 337

Query: 280 QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
            +P    K+I  LQ                      LQ LYL   Q+   P +I +LQ L
Sbjct: 338 TLP----KEIEQLQ---------------------KLQTLYLEGNQITTFPKEIGQLQNL 372

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           + L+L  N L ++P+    L +L EL+L  N ++ LP E+G L+  L+ L L  NP+ S
Sbjct: 373 QELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQ-KLRKLNLYNNPIAS 430



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 178/369 (48%), Gaps = 25/369 (6%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L+L  +++ ++   I    +L + Y+  N L+ LP E+G+L  L  LDL+SN+L     E
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL---VNGPTPALLK 166
             +L+ L VL+L  N L+ LP E+G++  L+ L L  N L  L   +    N     L  
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNL 172

Query: 167 YLRSRLPE-----------NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 215
              + LPE           N      TT    I    +L    +EL+L    L+ +  E+
Sbjct: 173 NKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKL----QELNLGFNRLTTLREEV 228

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
            +   +  LDL  N +  LP E+     LQ L L   ++K  P  I+  L +L  L L+ 
Sbjct: 229 VQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGII-QLQNLRGLNLNY 287

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
             L  +P +    +  LQ L L  N + +LPE      L  LQELYL    LR  P +I 
Sbjct: 288 THLTILPKE-IGQLSKLQKLYLYGNQLTTLPE--EIGQLKKLQELYLGNNPLRTLPKEIE 344

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           +LQ+L+ L L  N + + P+    L +L EL+L  N ++ LP E+G L+ +LQ L L+ N
Sbjct: 345 QLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQ-NLQELNLEFN 403

Query: 395 PLRSIRRTI 403
            L ++ + +
Sbjct: 404 QLATLPKEV 412



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 23/168 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL + GN+LT L    I     L EL    N L  +P+ I  L +L  L L  N+I +
Sbjct: 303 LQKLYLYGNQLTTLPEE-IGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITT 361

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
            P  I    +L E  +G N L+ LP E+G+L  L  L+L  NQ                 
Sbjct: 362 FPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQ----------------- 404

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
                L+ LP E+G++  LRKL L  NP+ + +   +    P  + Y 
Sbjct: 405 -----LATLPKEVGQLQKLRKLNLYNNPIASEKIERIRKLLPKCIIYF 447


>gi|221379722|ref|NP_732231.2| Sur-8, isoform A [Drosophila melanogaster]
 gi|221379725|ref|NP_650620.3| Sur-8, isoform B [Drosophila melanogaster]
 gi|442619579|ref|NP_001262664.1| Sur-8, isoform F [Drosophila melanogaster]
 gi|261277919|sp|Q9VEK6.3|SUR8_DROME RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|21711803|gb|AAM75092.1| RH55123p [Drosophila melanogaster]
 gi|220903112|gb|AAF55415.3| Sur-8, isoform A [Drosophila melanogaster]
 gi|220903113|gb|AAN13743.2| Sur-8, isoform B [Drosophila melanogaster]
 gi|440217531|gb|AGB96044.1| Sur-8, isoform F [Drosophila melanogaster]
          Length = 641

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 196/410 (47%), Gaps = 20/410 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  + +TV+ +  +     LTEL    N +  +P  IG L  L  L L++N + S
Sbjct: 162 IKRLDLSKSSITVIPST-VKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTS 220

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S+  C  L    + +N L+ +P  + +L  L TL L  N++     +  QL  L++L
Sbjct: 221 LPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N +  L   IG +  L  L ++ N L  L   + N    + L    + L +  DS 
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-L 238
            +   + L+ +  R +            LS++P+ +     + + ++  N I +LP   L
Sbjct: 341 GNL--KSLVRLGMRYN-----------RLSSVPATLKNCKSMDEFNVEGNGITQLPDGML 387

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +S + L T+ LSRN+   +P       +++  + L++N + ++P   F     L  L++ 
Sbjct: 388 ASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMK 447

Query: 299 YNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N+  +LP +    +  ++ EL L    L++ P DI+ LQ L IL LS N L+ IP    
Sbjct: 448 ENMLTALPLD--IGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 505

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
           NL  L  LDL +N I  LP E+GLL   LQ L L  N +  + R+I   G
Sbjct: 506 NLRKLRILDLEENRIEVLPHEIGLLH-ELQRLILQTNQITMLPRSIGHLG 554



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 199/430 (46%), Gaps = 47/430 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L  L  ++N L  +PE++ + S+L  LDL  N++  IP  I    SL   Y+  
Sbjct: 202 IGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRF 261

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++A+  +L +L  L  L L  N+++E       L  L+ LD+S+N L  LP +IG   
Sbjct: 262 NRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCV 321

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L  +  S+ N     L   +R  +  N  S    T ++  +M       
Sbjct: 322 NLSALDLQHNELLDIPDSIGN-----LKSLVRLGMRYNRLSSVPATLKNCKSM------- 369

Query: 198 SKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIK 255
             E ++EG  ++ +P  +  +   +T + LSRN     P    +   ++ ++ L  N+I 
Sbjct: 370 -DEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRID 428

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             P  I +    L+ L +  N L  +P D    + M++ L+L+ N +  LP++    +L 
Sbjct: 429 KIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE-LNLATNALQKLPDD--IMNLQ 485

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-------------------- 354
           +L+ L L    L++ P  I  L++LRILDL +N ++ +P                     
Sbjct: 486 NLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITM 545

Query: 355 ---GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAV 411
                 +L +LT L +S+NN+  LP E+G LE SL+ L ++ NP   + +   +      
Sbjct: 546 LPRSIGHLGNLTHLSVSENNLQFLPEEIGSLE-SLENLYINQNP--GLEKLPFELALCQN 602

Query: 412 LKYLK-DKIP 420
           LKYL  DK P
Sbjct: 603 LKYLNIDKCP 612



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 177/407 (43%), Gaps = 68/407 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I +   LT L  S N L  +PE IG+   L  LDL  N +L IP SI    SL    M  
Sbjct: 294 IGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRY 353

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKM 136
           N LS++PA L     +   ++  N + +    + A    L+ + LS N  +  P      
Sbjct: 354 NRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYP------ 407

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
                   TG P                                          A   +V
Sbjct: 408 --------TGGP------------------------------------------AQFTNV 417

Query: 197 TSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
            S  ++LE   +  IP  I+  A  +TKL++  N +  LP ++ +  ++  L L+ N ++
Sbjct: 418 YS--INLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQ 475

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             PD I+ +L +L  L L NN L+++P +   ++  L+ILDL  N I  LP       L 
Sbjct: 476 KLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNLRKLRILDLEENRIEVLPHE--IGLLH 531

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NIS 373
            LQ L L+  Q+   P  I  L  L  L +S+N+LQ +PE   +L SL  L ++ N  + 
Sbjct: 532 ELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLE 591

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            LP EL L + +L+ L +D  PL +I   I   G   VL++LK   P
Sbjct: 592 KLPFELALCQ-NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSP 637



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 24/169 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E N++  +   + +    LT+L   +N+L  +P  IG+   ++ L+L  N +  +P 
Sbjct: 420 INLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPD 479

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN-------------QLKEYCVE 110
            I    +L    + NN L  +P  +G L KL  LDL  N             +L+   ++
Sbjct: 480 DIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQ 539

Query: 111 ACQL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
             Q+            L+ L +S N+L  LP EIG + +L  L +  NP
Sbjct: 540 TNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNP 588



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           R + ++ LDLS++S+  IP   K    LTEL L  N I  LPPE+G L  SL+ L L+ N
Sbjct: 158 RDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCL-VSLRNLALNEN 216

Query: 395 PLRSIRRTILDRGTKAVLKYLKDKIPE 421
            L S+  ++ +     VL    +K+ E
Sbjct: 217 SLTSLPESLQNCSQLKVLDLRHNKLAE 243


>gi|456875031|gb|EMF90265.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 526

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 179/388 (46%), Gaps = 45/388 (11%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S + L  +P+ IG+L  L +L L+  ++ ++P  I     L    +  N+L+ LP E+GK
Sbjct: 61  SNHKLTNLPKEIGNLQNLQKLSLYGKQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGK 120

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L KL  L L +NQL  +  E  +L +L  L L++N L+ LP EIGK+  L++L L GN  
Sbjct: 121 LQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPEEIGKLQKLKELHLDGNQF 180

Query: 150 RTLRSSLVN--------------GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
            TL   +                   P  +K L++    N DS   TT    I     L 
Sbjct: 181 TTLPKEIEKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQ 240

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
                L+L+    + +P EI +   +  L+L  N    LP E+ +   LQ L L+ N++ 
Sbjct: 241 W----LNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLT 296

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSD-------------------GFKDIPMLQILD 296
             P  I   L SL  L L  N L  +P +                     K+I  LQ L 
Sbjct: 297 TLPKEI-GKLQSLQRLTLWENQLTTLPKEIGNLQNLQKLNLNNNPLTTLPKEIGKLQNLQ 355

Query: 297 LSY----NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
             +       +LP+     +L +LQ+L L   +L   P +I  LQ L+ LDL  N L ++
Sbjct: 356 QLFLGGNQFTTLPKE--IGNLQNLQKLDLYYNKLTTLPKEIGNLQNLQKLDLYNNQLTTL 413

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELG 380
           P+   NL SL  LDLS N+++ LP E+G
Sbjct: 414 PKEIGNLQSLESLDLSYNDLTTLPKEIG 441



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 111/250 (44%), Gaps = 38/250 (15%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L+++ N+ T L    I +   L +L  + N L  +P+ IG L  L RL L +N++ ++P 
Sbjct: 265 LNLDSNRFTTLPKE-IGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWENQLTTLPK 323

Query: 64  SIS-----------------------GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 100
            I                           +L + ++G N  + LP E+G L  L  LDL+
Sbjct: 324 EIGNLQNLQKLNLNNNPLTTLPKEIGKLQNLQQLFLGGNQFTTLPKEIGNLQNLQKLDLY 383

Query: 101 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 159
            N+L     E   L+ L  LDL NN L+ LP EIG + +L  L L+ N L TL   +   
Sbjct: 384 YNKLTTLPKEIGNLQNLQKLDLYNNQLTTLPKEIGNLQSLESLDLSYNDLTTLPKEIGKL 443

Query: 160 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 219
                L+   ++L        +  KE  I    +L      L L G  L+ +P EI +  
Sbjct: 444 QKLKKLELYYNQL-------KTLPKE--IEKLQKLET----LGLYGNQLTTLPEEIGKLQ 490

Query: 220 EITKLDLSRN 229
           ++ +LDL  N
Sbjct: 491 KLQELDLGDN 500



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 83/149 (55%), Gaps = 2/149 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L + GN+ T L    I +   L +L    N L  +P+ IG+L  L +LDL+ N++ +
Sbjct: 354 LQQLFLGGNQFTTLPKE-IGNLQNLQKLDLYYNKLTTLPKEIGNLQNLQKLDLYNNQLTT 412

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I    SL    +  N L+ LP E+GKL KL  L+L+ NQLK    E  +L +L  L
Sbjct: 413 LPKEIGNLQSLESLDLSYNDLTTLPKEIGKLQKLKKLELYYNQLKTLPKEIEKLQKLETL 472

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
            L  N L+ LP EIGK+  L++L L  NP
Sbjct: 473 GLYGNQLTTLPEEIGKLQKLQELDLGDNP 501


>gi|428181668|gb|EKX50531.1| hypothetical protein GUITHDRAFT_66992 [Guillardia theta CCMP2712]
          Length = 614

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 197/394 (50%), Gaps = 25/394 (6%)

Query: 2   SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 61
           +KLD+  N LT +    +   T LT+L   KN L  +P  IG L +L  L +  N+I  +
Sbjct: 47  AKLDLSCNGLTFVPIE-VVRMTNLTQLKLFKNNLTNLPSAIGGLLKLTSLSVIDNKISVL 105

Query: 62  PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL 121
           P  +    +L +  +  N  + L   +G+++KL +L   +N +     E  +L L    L
Sbjct: 106 PPEMGKLLNLRKLRISYNDFTKLTPVIGQMTKLESLKADNNSITHLIPEFGKLDLR---L 162

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR------------ 169
           SNN L  LP E+G MT+L +L L  N L+T+   +  G    L++               
Sbjct: 163 SNNQLESLPTEMGSMTSLTQLKLPFNLLKTVPKEI--GDLENLIELTLQNNSLERIPMEL 220

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLS 227
            +L + E       K+ + ++   +    K  EL L    L+++P  I    +I  L L 
Sbjct: 221 GKLSQLEALMLDHNKDLINSLPANIGRCEKLKELWLSDNRLTSMPVVIEAFTQIEVLKLV 280

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            N I+ELP ++ +  SL+ L L+ N++   P  I  +L++L  + L +N L+++P +  +
Sbjct: 281 GNRIEELPKQIGTLTSLKELHLAWNQLTTLPVEI-GNLANLEKMLLSHNRLQRIPVE-IQ 338

Query: 288 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
           ++  L  L++  N + SLP       L +L+E      Q++  P+ I RL +L+ILD S+
Sbjct: 339 NLTSLTYLNVGKNRLPSLPNE--IGDLDNLEEFRTHHNQIQAIPSSIGRLLKLKILDASE 396

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           N L ++P+    LTSL  LDL+ NN+ ALP  +G
Sbjct: 397 NQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIG 430



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 179/388 (46%), Gaps = 58/388 (14%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N L  +P  +GS++ L +L L  N + ++P  I    +L E  + NN+L  +P ELGK
Sbjct: 163 SNNQLESLPTEMGSMTSLTQLKLPFNLLKTVPKEIGDLENLIELTLQNNSLERIPMELGK 222

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
           LS+L  L L  N+                DL N     LP  IG+   L++L L+ N L 
Sbjct: 223 LSQLEALMLDHNK----------------DLIN----SLPANIGRCEKLKELWLSDNRLT 262

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
           ++   +       +LK + +R+ E      + T             + KEL L    L+ 
Sbjct: 263 SMPVVIEAFTQIEVLKLVGNRIEELPKQIGTLT-------------SLKELHLAWNQLTT 309

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +P EI     + K+ LS N +Q +P E+ +  SL  L + +N++   P+ I   L +L  
Sbjct: 310 LPVEIGNLANLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEI-GDLDNLEE 368

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN-PPFSSLPHL------------ 316
            +  +N ++ +PS     +  L+ILD S N + +LP++    +SL HL            
Sbjct: 369 FRTHHNQIQAIPS-SIGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPG 427

Query: 317 --------QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 368
                   ++L L R +L   P  + +L  L  LDL  N L S+P G  NL +L + +L 
Sbjct: 428 TIGNLTALKKLLLYRNKLTILPLTVGKLTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLI 487

Query: 369 DNNISALPPELGLLEPSLQALRLDGNPL 396
            N +  LPP +G LE SL  L L  N L
Sbjct: 488 QNALVKLPPSIGSLE-SLTQLSLRENQL 514



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 187/405 (46%), Gaps = 24/405 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           + S T LT+L    NLL  +P+ IG L  LI L L  N +  IP  +     L    + +
Sbjct: 174 MGSMTSLTQLKLPFNLLKTVPKEIGDLENLIELTLQNNSLERIPMELGKLSQLEALMLDH 233

Query: 79  NA--LSALPAELGKLSKLGTLDLHSNQLKE--YCVEACQLRLSVLDLSNNSLSGLPPEIG 134
           N   +++LPA +G+  KL  L L  N+L      +EA   ++ VL L  N +  LP +IG
Sbjct: 234 NKDLINSLPANIGRCEKLKELWLSDNRLTSMPVVIEAFT-QIEVLKLVGNRIEELPKQIG 292

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            +T+L++L L  N L TL   + N      L  L   L  +   +    +   +T  T L
Sbjct: 293 TLTSLKELHLAWNQLTTLPVEIGN------LANLEKMLLSHNRLQRIPVEIQNLTSLTYL 346

Query: 195 SVTSKELSLEGMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           +V        G N L ++P+EI +   + +     N IQ +P  +     L+ L  S N+
Sbjct: 347 NV--------GKNRLPSLPNEIGDLDNLEEFRTHHNQIQAIPSSIGRLLKLKILDASENQ 398

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 313
           +   PD+I   L+SL+ L L  N L  +P        + ++L     +  LP       L
Sbjct: 399 LTTLPDSI-GELTSLAHLDLAVNNLEALPGTIGNLTALKKLLLYRNKLTILPLT--VGKL 455

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
            +L+ L L+  +L   P  +  L+ L   +L QN+L  +P    +L SLT+L L +N ++
Sbjct: 456 TNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQNALVKLPPSIGSLESLTQLSLRENQLA 515

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
            LP  + +L  +LQ L L  N L  +   I D  T  V + L  K
Sbjct: 516 ILPASMNMLF-NLQILSLSANRLYELPPLIEDLTTLQVCQDLPQK 559



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 174/378 (46%), Gaps = 49/378 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN++  L    I + T L EL  + N L  +P  IG+L+ L ++ L  NR+  IP 
Sbjct: 277 LKLVGNRIEELPKQ-IGTLTSLKELHLAWNQLTTLPVEIGNLANLEKMLLSHNRLQRIPV 335

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I    SL    +G N L +LP E+G L  L     H NQ++       +L +L +LD S
Sbjct: 336 EIQNLTSLTYLNVGKNRLPSLPNEIGDLDNLEEFRTHHNQIQAIPSSIGRLLKLKILDAS 395

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP  IG++T+L  L L  N L  L  ++  G   AL K L  R   N+ +    
Sbjct: 396 ENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTI--GNLTALKKLLLYR---NKLTILPL 450

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
           T   L  + T        L L+   L+++P  +     + K +L +N++ +LPP + S  
Sbjct: 451 TVGKLTNLET--------LDLQTNRLTSLPPGVGNLKNLMKFNLIQNALVKLPPSIGSLE 502

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           SL  L L  N++   P A +  L +L  L L  N L ++P    +D+  LQ+        
Sbjct: 503 SLTQLSLRENQLAILP-ASMNMLFNLQILSLSANRLYELPP-LIEDLTTLQV------CQ 554

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
            LP+    S  P LQ                       +L +S N+L+++P    N  +L
Sbjct: 555 DLPQK---SLTPSLQ-----------------------VLTISDNALETLPVKIGNFRAL 588

Query: 363 TELDLSDNNISALPPELG 380
           T+L +S+N +  LP  +G
Sbjct: 589 TQLAVSNNQLKELPATIG 606



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 110/221 (49%), Gaps = 14/221 (6%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
           AS+N L  +P++IG L+ L  LDL  N + ++P +I    +L +  +  N L+ LP  +G
Sbjct: 394 ASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGNLTALKKLLLYRNKLTILPLTVG 453

Query: 90  KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
           KL+ L TLDL +N+L         L+ L   +L  N+L  LPP IG + +L +L L  N 
Sbjct: 454 KLTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQNALVKLPPSIGSLESLTQLSLRENQ 513

Query: 149 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL--SLEGM 206
           L  L +S+       L       L  N   E     EDL T+     +  K L  SL+ +
Sbjct: 514 LAILPASM-----NMLFNLQILSLSANRLYELPPLIEDLTTLQVCQDLPQKSLTPSLQVL 568

Query: 207 NLS-----AIPSEIWEAGEITKLDLSRNSIQELPPEL-SSC 241
            +S      +P +I     +T+L +S N ++ELP  + +SC
Sbjct: 569 TISDNALETLPVKIGNFRALTQLAVSNNQLKELPATIGASC 609



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 72/141 (51%), Gaps = 2/141 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N L  L    I + T L +L+  +N L  +P T+G L+ L  LDL  NR+ S
Sbjct: 412 LAHLDLAVNNLEALPGT-IGNLTALKKLLLYRNKLTILPLTVGKLTNLETLDLQTNRLTS 470

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  +    +L +F +  NAL  LP  +G L  L  L L  NQL         L  L +L
Sbjct: 471 LPPGVGNLKNLMKFNLIQNALVKLPPSIGSLESLTQLSLRENQLAILPASMNMLFNLQIL 530

Query: 120 DLSNNSLSGLPPEIGKMTTLR 140
            LS N L  LPP I  +TTL+
Sbjct: 531 SLSANRLYELPPLIEDLTTLQ 551


>gi|442619581|ref|NP_001262665.1| Sur-8, isoform E [Drosophila melanogaster]
 gi|440217532|gb|AGB96045.1| Sur-8, isoform E [Drosophila melanogaster]
          Length = 694

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 196/410 (47%), Gaps = 20/410 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  + +TV+ +  +     LTEL    N +  +P  IG L  L  L L++N + S
Sbjct: 162 IKRLDLSKSSITVIPST-VKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTS 220

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S+  C  L    + +N L+ +P  + +L  L TL L  N++     +  QL  L++L
Sbjct: 221 LPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N +  L   IG +  L  L ++ N L  L   + N    + L    + L +  DS 
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-L 238
            +   + L+ +  R +            LS++P+ +     + + ++  N I +LP   L
Sbjct: 341 GNL--KSLVRLGMRYN-----------RLSSVPATLKNCKSMDEFNVEGNGITQLPDGML 387

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +S + L T+ LSRN+   +P       +++  + L++N + ++P   F     L  L++ 
Sbjct: 388 ASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMK 447

Query: 299 YNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N+  +LP +    +  ++ EL L    L++ P DI+ LQ L IL LS N L+ IP    
Sbjct: 448 ENMLTALPLD--IGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 505

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
           NL  L  LDL +N I  LP E+GLL   LQ L L  N +  + R+I   G
Sbjct: 506 NLRKLRILDLEENRIEVLPHEIGLLH-ELQRLILQTNQITMLPRSIGHLG 554



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 199/430 (46%), Gaps = 47/430 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L  L  ++N L  +PE++ + S+L  LDL  N++  IP  I    SL   Y+  
Sbjct: 202 IGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRF 261

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++A+  +L +L  L  L L  N+++E       L  L+ LD+S+N L  LP +IG   
Sbjct: 262 NRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCV 321

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L  +  S+ N     L   +R  +  N  S    T ++  +M       
Sbjct: 322 NLSALDLQHNELLDIPDSIGN-----LKSLVRLGMRYNRLSSVPATLKNCKSM------- 369

Query: 198 SKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIK 255
             E ++EG  ++ +P  +  +   +T + LSRN     P    +   ++ ++ L  N+I 
Sbjct: 370 -DEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRID 428

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             P  I +    L+ L +  N L  +P D    + M++ L+L+ N +  LP++    +L 
Sbjct: 429 KIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE-LNLATNALQKLPDD--IMNLQ 485

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-------------------- 354
           +L+ L L    L++ P  I  L++LRILDL +N ++ +P                     
Sbjct: 486 NLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITM 545

Query: 355 ---GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAV 411
                 +L +LT L +S+NN+  LP E+G LE SL+ L ++ NP   + +   +      
Sbjct: 546 LPRSIGHLGNLTHLSVSENNLQFLPEEIGSLE-SLENLYINQNP--GLEKLPFELALCQN 602

Query: 412 LKYLK-DKIP 420
           LKYL  DK P
Sbjct: 603 LKYLNIDKCP 612



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 177/407 (43%), Gaps = 68/407 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I +   LT L  S N L  +PE IG+   L  LDL  N +L IP SI    SL    M  
Sbjct: 294 IGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRY 353

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKM 136
           N LS++PA L     +   ++  N + +    + A    L+ + LS N  +  P      
Sbjct: 354 NRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYP------ 407

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
                   TG P                                          A   +V
Sbjct: 408 --------TGGP------------------------------------------AQFTNV 417

Query: 197 TSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
            S  ++LE   +  IP  I+  A  +TKL++  N +  LP ++ +  ++  L L+ N ++
Sbjct: 418 YS--INLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQ 475

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             PD I+ +L +L  L L NN L+++P +   ++  L+ILDL  N I  LP       L 
Sbjct: 476 KLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNLRKLRILDLEENRIEVLPHE--IGLLH 531

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NIS 373
            LQ L L+  Q+   P  I  L  L  L +S+N+LQ +PE   +L SL  L ++ N  + 
Sbjct: 532 ELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLE 591

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            LP EL L + +L+ L +D  PL +I   I   G   VL++LK   P
Sbjct: 592 KLPFELALCQ-NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSP 637



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 24/169 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E N++  +   + +    LT+L   +N+L  +P  IG+   ++ L+L  N +  +P 
Sbjct: 420 INLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPD 479

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN-------------QLKEYCVE 110
            I    +L    + NN L  +P  +G L KL  LDL  N             +L+   ++
Sbjct: 480 DIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQ 539

Query: 111 ACQL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
             Q+            L+ L +S N+L  LP EIG + +L  L +  NP
Sbjct: 540 TNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNP 588



 Score = 45.8 bits (107), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           R + ++ LDLS++S+  IP   K    LTEL L  N I  LPPE+G L  SL+ L L+ N
Sbjct: 158 RDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCL-VSLRNLALNEN 216

Query: 395 PLRSIRRTILDRGTKAVLKYLKDKIPE 421
            L S+  ++ +     VL    +K+ E
Sbjct: 217 SLTSLPESLQNCSQLKVLDLRHNKLAE 243


>gi|113677869|ref|NP_001038251.1| leucine-rich repeat protein SHOC-2 [Danio rerio]
 gi|123888175|sp|Q1L8Y7.1|SHOC2_DANRE RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|94732359|emb|CAK04058.1| novel protein similar to vertebrate soc-2 suppressor of clear
           homolog (C. elegans) (SHOC2) [Danio rerio]
 gi|161611878|gb|AAI55580.1| Si:ch211-197i12.3 [Danio rerio]
          Length = 561

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 187/388 (48%), Gaps = 42/388 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +   + L  L  S+N L  +P+++ +L +L  LDL  N++  IP+ +    SL   Y+  
Sbjct: 121 VGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRF 180

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++ +  ++  LSKL  L +  N++K+   E  +L  L  LD+++N L  LP EIG  T
Sbjct: 181 NRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 240

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            +  L L  N L  L                    PE   + AS  +             
Sbjct: 241 QITNLDLQHNDLLDL--------------------PETIGNLASINR------------- 267

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKD 256
              L L    LSAIP  + +  E+ +L+L  N+I  LP  L SS  +L +L L+RN  + 
Sbjct: 268 ---LGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQS 324

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
           +P    +  S++  L +++N + ++P   F    +L  L++  N + SLP +  F +   
Sbjct: 325 YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD--FGTWTS 382

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           + EL L   QL + P DI  L  L +L LS N L+ +P G  NL  L ELDL +N + +L
Sbjct: 383 MVELNLATNQLTKIPEDICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESL 442

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P E+  L+  LQ L L  N L ++ R I
Sbjct: 443 PNEIAYLK-DLQKLVLTNNQLTTLPRGI 469



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 110/206 (53%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LPPE+   + L TL LS N +   
Sbjct: 81  SMRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSL 140

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++P+  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 141 PDS-LDNLKKLRMLDLRHNKLREIPAVVYR-VSSLTTLYLRFNRITTVEK-DIKNLSKLT 197

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N++  LP 
Sbjct: 198 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPE 257

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  S+  L L  N L +I R++
Sbjct: 258 TIGNLA-SINRLGLRYNRLSAIPRSL 282



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 339 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 398

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I G  SL    + NN L  LP  +G L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 399 DICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 458

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L+ L
Sbjct: 459 NNQLTTLPRGIGHLTNLTYLGLGENLLQHL 488


>gi|195501949|ref|XP_002098015.1| GE24170 [Drosophila yakuba]
 gi|261277890|sp|B4PU77.1|SUR8_DROYA RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194184116|gb|EDW97727.1| GE24170 [Drosophila yakuba]
          Length = 645

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 196/410 (47%), Gaps = 20/410 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  + +TV+ +  +     LTEL    N +  +P  IG L  L  L L++N + S
Sbjct: 166 IKRLDLSKSSITVIPST-VKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTS 224

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S+  C  L    + +N L+ +P  + +L  L TL L  N++     +  QL  L++L
Sbjct: 225 LPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 284

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N +  L   IG +  L  L ++ N L  L   + N    + L    + L +  DS 
Sbjct: 285 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 344

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-L 238
            +   + L+ +  R +            LS++P+ +     + + ++  N I +LP   L
Sbjct: 345 GNL--KSLVRLGMRYN-----------RLSSVPATLKNCKSMDEFNVEGNGITQLPDGML 391

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +S + L T+ LSRN+   +P       +++  + L++N + ++P   F     L  L++ 
Sbjct: 392 ASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMK 451

Query: 299 YNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N+  +LP +    +  ++ EL L    L++ P DI+ LQ L IL LS N L+ IP    
Sbjct: 452 ENMLTALPLD--IGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 509

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
           NL  L  LDL +N I  LP E+GLL   LQ L L  N +  + R+I   G
Sbjct: 510 NLRRLRILDLEENRIEVLPHEIGLLH-ELQRLILQTNQITMLPRSIGHLG 558



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 199/430 (46%), Gaps = 47/430 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L  L  ++N L  +PE++ + S+L  LDL  N++  IP  I    SL   Y+  
Sbjct: 206 IGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRF 265

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++A+  +L +L  L  L L  N+++E       L  L+ LD+S+N L  LP +IG   
Sbjct: 266 NRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCV 325

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L  +  S+ N     L   +R  +  N  S    T ++  +M       
Sbjct: 326 NLSALDLQHNELLDIPDSIGN-----LKSLVRLGMRYNRLSSVPATLKNCKSM------- 373

Query: 198 SKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIK 255
             E ++EG  ++ +P  +  +   +T + LSRN     P    +   ++ ++ L  N+I 
Sbjct: 374 -DEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRID 432

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             P  I +    L+ L +  N L  +P D    + M++ L+L+ N +  LP++    +L 
Sbjct: 433 KIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVE-LNLATNALQKLPDD--IMNLQ 489

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-------------------- 354
           +L+ L L    L++ P  I  L++LRILDL +N ++ +P                     
Sbjct: 490 NLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITM 549

Query: 355 ---GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAV 411
                 +L +LT L +S+NN+  LP E+G LE SL+ L ++ NP   + +   +      
Sbjct: 550 LPRSIGHLGNLTHLSVSENNLQFLPEEIGSLE-SLENLYINQNP--GLEKLPFELALCQN 606

Query: 412 LKYLK-DKIP 420
           LKYL  DK P
Sbjct: 607 LKYLNIDKCP 616



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 177/407 (43%), Gaps = 68/407 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I +   LT L  S N L  +PE IG+   L  LDL  N +L IP SI    SL    M  
Sbjct: 298 IGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRY 357

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKM 136
           N LS++PA L     +   ++  N + +    + A    L+ + LS N  +  P      
Sbjct: 358 NRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYP------ 411

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
                   TG P                                          A   +V
Sbjct: 412 --------TGGP------------------------------------------AQFTNV 421

Query: 197 TSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
            S  ++LE   +  IP  I+  A  +TKL++  N +  LP ++ +  ++  L L+ N ++
Sbjct: 422 YS--INLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQ 479

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             PD I+ +L +L  L L NN L+++P +   ++  L+ILDL  N I  LP       L 
Sbjct: 480 KLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNLRRLRILDLEENRIEVLPHE--IGLLH 535

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NIS 373
            LQ L L+  Q+   P  I  L  L  L +S+N+LQ +PE   +L SL  L ++ N  + 
Sbjct: 536 ELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLE 595

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            LP EL L + +L+ L +D  PL +I   I   G   VL++LK   P
Sbjct: 596 KLPFELALCQ-NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSP 641



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 118/281 (41%), Gaps = 62/281 (22%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E N++  +   + +    LT+L   +N+L  +P  IG+   ++ L+L  N +  +P 
Sbjct: 424 INLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPD 483

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I    +L    + NN L  +P  +G L                       RL +LDL  
Sbjct: 484 DIMNLQNLEILILSNNMLKKIPNTIGNLR----------------------RLRILDLEE 521

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N +  LP EIG +  L++L+L  N +  L         P  + +L +             
Sbjct: 522 NRIEVLPHEIGLLHELQRLILQTNQITML---------PRSIGHLGN------------- 559

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCA 242
                   T LSV+         NL  +P EI     +  L +++N  +++LP EL+ C 
Sbjct: 560 -------LTHLSVSEN-------NLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQ 605

Query: 243 SLQTLILSRNKIKDWPDAILTSLSS--LSCLKLDNNPLRQV 281
           +L+ L + +  +   P  I     S  L  LK+ ++P RQ+
Sbjct: 606 NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKM-HSPYRQM 645



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           R + ++ LDLS++S+  IP   K    LTEL L  N I  LPPE+G L  SL+ L L+ N
Sbjct: 162 RDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCL-VSLRNLALNEN 220

Query: 395 PLRSIRRTILDRGTKAVLKYLKDKIPE 421
            L S+  ++ +     VL    +K+ E
Sbjct: 221 SLTSLPESLQNCSQLKVLDLRHNKLAE 247


>gi|261277896|sp|B4QVR7.2|SUR8_DROSI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
          Length = 680

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 196/410 (47%), Gaps = 20/410 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  + +TV+ +  +     LTEL    N +  +P  IG L  L  L L++N + S
Sbjct: 162 IKRLDLSKSSITVIPST-VKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTS 220

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S+  C  L    + +N L+ +P  + +L  L TL L  N++     +  QL  L++L
Sbjct: 221 LPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N +  L   IG +  L  L ++ N L  L   + N    + L    + L +  DS 
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-L 238
            +   + L+ +  R +            LS++P+ +     + + ++  N I +LP   L
Sbjct: 341 GNL--KSLVRLGMRYN-----------RLSSVPATLKNCKSMDEFNVEGNGITQLPDGML 387

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +S + L T+ LSRN+   +P       +++  + L++N + ++P   F     L  L++ 
Sbjct: 388 ASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMK 447

Query: 299 YNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N+  +LP +    +  ++ EL L    L++ P DI+ LQ L IL LS N L+ IP    
Sbjct: 448 ENMLTALPLD--IGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 505

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
           NL  L  LDL +N I  LP E+GLL   LQ L L  N +  + R+I   G
Sbjct: 506 NLRRLRILDLEENRIEVLPHEIGLLH-ELQRLILQTNQITMLPRSIGHLG 554



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 195/463 (42%), Gaps = 100/463 (21%)

Query: 47  RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 106
           R+ RLDL ++ I  IPS++  C  L E Y+ +N +  LP E+G L  L  L L+ N L  
Sbjct: 161 RIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTS 220

Query: 107 Y--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164
               ++ C  +L VLDL +N L+ +PP I ++ +L  L L  N     R + V      L
Sbjct: 221 LPESLQNCS-QLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFN-----RITAVADDLRQL 274

Query: 165 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL------EGMNLSA-------- 210
           +      L EN+  E  +    L+ + T L V+   L          +NLSA        
Sbjct: 275 VNLTMLSLRENKIRELGSAIGALVNLTT-LDVSHNHLEHLPEDIGNCVNLSALDLQHNEL 333

Query: 211 --IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
             IP  I     + +L +  N +  +P  L +C S+    +  N I   PD +L SLS L
Sbjct: 334 LDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGL 393

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP----------------ENPPFS 311
           + + L  N     P+ G      +  ++L +N I  +P                EN   +
Sbjct: 394 TTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENM-LT 452

Query: 312 SLP-------HLQELYLRRMQLREAPTDILRLQ-----------------------QLRI 341
           +LP       ++ EL L    L++ P DI+ LQ                       +LRI
Sbjct: 453 ALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRI 512

Query: 342 LDLSQNSLQSIPE-----------------------GFKNLTSLTELDLSDNNISALPPE 378
           LDL +N ++ +P                           +L +LT L +S+NN+  LP E
Sbjct: 513 LDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEE 572

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK-DKIP 420
           +G LE SL+ L ++ NP   + +   +      LKYL  DK P
Sbjct: 573 IGSLE-SLENLYINQNP--GLEKLPFELALCQNLKYLNIDKCP 612



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 177/407 (43%), Gaps = 68/407 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I +   LT L  S N L  +PE IG+   L  LDL  N +L IP SI    SL    M  
Sbjct: 294 IGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRY 353

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKM 136
           N LS++PA L     +   ++  N + +    + A    L+ + LS N  +  P      
Sbjct: 354 NRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYP------ 407

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
                   TG P                                          A   +V
Sbjct: 408 --------TGGP------------------------------------------AQFTNV 417

Query: 197 TSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
            S  ++LE   +  IP  I+  A  +TKL++  N +  LP ++ +  ++  L L+ N ++
Sbjct: 418 YS--INLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQ 475

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             PD I+ +L +L  L L NN L+++P +   ++  L+ILDL  N I  LP       L 
Sbjct: 476 KLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNLRRLRILDLEENRIEVLPHE--IGLLH 531

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NIS 373
            LQ L L+  Q+   P  I  L  L  L +S+N+LQ +PE   +L SL  L ++ N  + 
Sbjct: 532 ELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLE 591

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            LP EL L + +L+ L +D  PL +I   I   G   VL++LK   P
Sbjct: 592 KLPFELALCQ-NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSP 637



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 115/220 (52%), Gaps = 8/220 (3%)

Query: 185 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 244
           +D+I    R  +  K L L   +++ IPS + E   +T+L L  N I +LPPE+    SL
Sbjct: 151 QDVIKALQRCRI--KRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSL 208

Query: 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 303
           + L L+ N +   P++ L + S L  L L +N L ++P   ++ +  L  L L +N I +
Sbjct: 209 RNLALNENSLTSLPES-LQNCSQLKVLDLRHNKLAEIPPVIYR-LRSLTTLYLRFNRITA 266

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
           + ++     L +L  L LR  ++RE  + I  L  L  LD+S N L+ +PE   N  +L+
Sbjct: 267 VADD--LRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLS 324

Query: 364 ELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            LDL  N +  +P  +G L+ SL  L +  N L S+  T+
Sbjct: 325 ALDLQHNELLDIPDSIGNLK-SLVRLGMRYNRLSSVPATL 363



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 118/281 (41%), Gaps = 62/281 (22%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E N++  +   + +    LT+L   +N+L  +P  IG+   ++ L+L  N +  +P 
Sbjct: 420 INLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPD 479

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I    +L    + NN L  +P  +G L                       RL +LDL  
Sbjct: 480 DIMNLQNLEILILSNNMLKKIPNTIGNLR----------------------RLRILDLEE 517

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N +  LP EIG +  L++L+L  N +  L         P  + +L +             
Sbjct: 518 NRIEVLPHEIGLLHELQRLILQTNQITML---------PRSIGHLGN------------- 555

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCA 242
                   T LSV+         NL  +P EI     +  L +++N  +++LP EL+ C 
Sbjct: 556 -------LTHLSVSEN-------NLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQ 601

Query: 243 SLQTLILSRNKIKDWPDAILTSLSS--LSCLKLDNNPLRQV 281
           +L+ L + +  +   P  I     S  L  LK+ ++P RQ+
Sbjct: 602 NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKM-HSPYRQI 641


>gi|449678559|ref|XP_002158634.2| PREDICTED: leucine-rich repeat protein soc-2 homolog [Hydra
           magnipapillata]
          Length = 499

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 134/423 (31%), Positives = 210/423 (49%), Gaps = 21/423 (4%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  NK+  +   ++ S   L +L+   N L  +   IG+L+ L  L L +NR+  IP 
Sbjct: 87  LDLRHNKIKEIPP-VLYSLVSLKQLLLRFNRLTTVEPEIGNLTHLTMLSLRENRLKHIPD 145

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           +I    SL    +  N L +LP E+GK  ++ TLDL  N+L++      +L  LS L L 
Sbjct: 146 TIGNLKSLVTLDLAKNHLESLPPEIGKCIEMNTLDLAHNELRDLPDSIGKLTALSRLGLR 205

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP  I + T L+++ +  N + +L S L+          L     EN  S+   
Sbjct: 206 YNQLTSLPSSICQCTLLQEINIESNGISSLPSGLLLSSKLCDSITLSRNEFENFPSDGP- 264

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSC 241
                       SVTS  L  +   +  IP  I+ +A  +TKL+L  N I ELP +  + 
Sbjct: 265 --------KQFASVTS--LVFDHNKIKKIPFGIFSKAQFLTKLNLKDNLIAELPLDFGTW 314

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY-N 300
           A+L  L L  N++   PD I   L +L  L L NN L+++P     ++  L++LDL   N
Sbjct: 315 ANLDELNLGTNQLTVLPDDI-KWLVNLEVLILSNNQLKRIPR-SIGNLRKLRVLDLDENN 372

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
           +  LP    +  L  L++L L+  +L   P  I  L++L  L + +N L  +P     L 
Sbjct: 373 LECLPNEIEY--LKSLEKLLLQSNKLTTLPATIGHLKKLSYLSVGENDLTVLPPEIGALE 430

Query: 361 SLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           SL +L L+DN N+ ALP  L L + +L  + +D  PL S+ + I+  G   V++YL+ + 
Sbjct: 431 SLEQLFLNDNKNLHALPHTLVLCQ-NLTIMNIDACPLSSLPQEIVANGPSVVIQYLRFEG 489

Query: 420 PEN 422
           P N
Sbjct: 490 PYN 492



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 185/386 (47%), Gaps = 21/386 (5%)

Query: 44  SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 103
            L+ L +L L+ N+I  +P  I    +L    +  N++S+LPAE+    KL  LDL  N+
Sbjct: 34  GLTGLTQLFLYGNKISKLPPEIGLLVNLETLLLNENSISSLPAEIVNCKKLQMLDLRHNK 93

Query: 104 LKEY-CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 162
           +KE   V    + L  L L  N L+ + PEIG +T L  L L  N L+ +  ++ N  + 
Sbjct: 94  IKEIPPVLYSLVSLKQLLLRFNRLTTVEPEIGNLTHLTMLSLRENRLKHIPDTIGNLKSL 153

Query: 163 ALLKYLRSRL----PE-------NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
             L   ++ L    PE       N    A     DL     +L+  S+ L L    L+++
Sbjct: 154 VTLDLAKNHLESLPPEIGKCIEMNTLDLAHNELRDLPDSIGKLTALSR-LGLRYNQLTSL 212

Query: 212 PSEIWEAGEITKLDLSRNSI-QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           PS I +   + ++++  N I       L S     ++ LSRN+ +++P       +S++ 
Sbjct: 213 PSSICQCTLLQEINIESNGISSLPSGLLLSSKLCDSITLSRNEFENFPSDGPKQFASVTS 272

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 329
           L  D+N ++++P   F     L  L+L  N IA LP +  F +  +L EL L   QL   
Sbjct: 273 LVFDHNKIKKIPFGIFSKAQFLTKLNLKDNLIAELPLD--FGTWANLDELNLGTNQLTVL 330

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
           P DI  L  L +L LS N L+ IP    NL  L  LDL +NN+  LP E+  L+ SL+ L
Sbjct: 331 PDDIKWLVNLEVLILSNNQLKRIPRSIGNLRKLRVLDLDENNLECLPNEIEYLK-SLEKL 389

Query: 390 RLDGNPLRSIRRTILDRGTKAVLKYL 415
            L  N L ++  TI   G    L YL
Sbjct: 390 LLQSNKLTTLPATI---GHLKKLSYL 412



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 51/208 (24%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 59
           + +L++  N+LTVL +++   W + L  LI S N L  +P +IG+L +L  LDL +N + 
Sbjct: 317 LDELNLGTNQLTVLPDDI--KWLVNLEVLILSNNQLKRIPRSIGNLRKLRVLDLDENNLE 374

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 119
            +P+ I    SL +  + +N L+ LPA +G L KL                      S L
Sbjct: 375 CLPNEIEYLKSLEKLLLQSNKLTTLPATIGHLKKL----------------------SYL 412

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGN------------------------PLRTLRSS 155
            +  N L+ LPPEIG + +L +L L  N                        PL +L   
Sbjct: 413 SVGENDLTVLPPEIGALESLEQLFLNDNKNLHALPHTLVLCQNLTIMNIDACPLSSLPQE 472

Query: 156 LV-NGPTPALLKYLRSRLPENEDSEAST 182
           +V NGP+  +++YLR   P N ++   T
Sbjct: 473 IVANGPS-VVIQYLRFEGPYNGNNTLPT 499


>gi|195570161|ref|XP_002103077.1| GD20236 [Drosophila simulans]
 gi|194199004|gb|EDX12580.1| GD20236 [Drosophila simulans]
          Length = 724

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 196/410 (47%), Gaps = 20/410 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  + +TV+ +  +     LTEL    N +  +P  IG L  L  L L++N + S
Sbjct: 206 IKRLDLSKSSITVIPST-VKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTS 264

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S+  C  L    + +N L+ +P  + +L  L TL L  N++     +  QL  L++L
Sbjct: 265 LPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 324

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N +  L   IG +  L  L ++ N L  L   + N    + L    + L +  DS 
Sbjct: 325 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 384

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-L 238
            +   + L+ +  R +            LS++P+ +     + + ++  N I +LP   L
Sbjct: 385 GNL--KSLVRLGMRYN-----------RLSSVPATLKNCKSMDEFNVEGNGITQLPDGML 431

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +S + L T+ LSRN+   +P       +++  + L++N + ++P   F     L  L++ 
Sbjct: 432 ASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMK 491

Query: 299 YNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N+  +LP +    +  ++ EL L    L++ P DI+ LQ L IL LS N L+ IP    
Sbjct: 492 ENMLTALPLD--IGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 549

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
           NL  L  LDL +N I  LP E+GLL   LQ L L  N +  + R+I   G
Sbjct: 550 NLRRLRILDLEENRIEVLPHEIGLLH-ELQRLILQTNQITMLPRSIGHLG 598



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 195/463 (42%), Gaps = 100/463 (21%)

Query: 47  RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 106
           R+ RLDL ++ I  IPS++  C  L E Y+ +N +  LP E+G L  L  L L+ N L  
Sbjct: 205 RIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTS 264

Query: 107 Y--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164
               ++ C  +L VLDL +N L+ +PP I ++ +L  L L  N +  +   L       L
Sbjct: 265 LPESLQNCS-QLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLR-----QL 318

Query: 165 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL------EGMNLSA-------- 210
           +      L EN+  E  +    L+ + T L V+   L          +NLSA        
Sbjct: 319 VNLTMLSLRENKIRELGSAIGALVNLTT-LDVSHNHLEHLPEDIGNCVNLSALDLQHNEL 377

Query: 211 --IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
             IP  I     + +L +  N +  +P  L +C S+    +  N I   PD +L SLS L
Sbjct: 378 LDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGL 437

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP----------------ENPPFS 311
           + + L  N     P+ G      +  ++L +N I  +P                EN   +
Sbjct: 438 TTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENM-LT 496

Query: 312 SLP-------HLQELYLRRMQLREAPTDILRLQ-----------------------QLRI 341
           +LP       ++ EL L    L++ P DI+ LQ                       +LRI
Sbjct: 497 ALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRI 556

Query: 342 LDLSQNSLQSIPE-----------------------GFKNLTSLTELDLSDNNISALPPE 378
           LDL +N ++ +P                           +L +LT L +S+NN+  LP E
Sbjct: 557 LDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEE 616

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK-DKIP 420
           +G LE SL+ L ++ NP   + +   +      LKYL  DK P
Sbjct: 617 IGSLE-SLENLYINQNP--GLEKLPFELALCQNLKYLNIDKCP 656



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 174/407 (42%), Gaps = 68/407 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I +   LT L  S N L  +PE IG+   L  LDL  N +L IP SI    SL    M  
Sbjct: 338 IGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRY 397

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKM 136
           N LS++PA L     +   ++  N + +    + A    L+ + LS N  +  P      
Sbjct: 398 NRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYP------ 451

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
                   TG P +      +N                                      
Sbjct: 452 --------TGGPAQFTNVYSIN-------------------------------------- 465

Query: 197 TSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
                 LE   +  IP  I+  A  +TKL++  N +  LP ++ +  ++  L L+ N ++
Sbjct: 466 ------LEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQ 519

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             PD I+ +L +L  L L NN L+++P +   ++  L+ILDL  N I  LP       L 
Sbjct: 520 KLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNLRRLRILDLEENRIEVLPHE--IGLLH 575

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NIS 373
            LQ L L+  Q+   P  I  L  L  L +S+N+LQ +PE   +L SL  L ++ N  + 
Sbjct: 576 ELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLE 635

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            LP EL L + +L+ L +D  PL +I   I   G   VL++LK   P
Sbjct: 636 KLPFELALCQ-NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSP 681



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 115/220 (52%), Gaps = 8/220 (3%)

Query: 185 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 244
           +D+I    R  +  K L L   +++ IPS + E   +T+L L  N I +LPPE+    SL
Sbjct: 195 QDVIKALQRCRI--KRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSL 252

Query: 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 303
           + L L+ N +   P++ L + S L  L L +N L ++P   ++ +  L  L L +N I +
Sbjct: 253 RNLALNENSLTSLPES-LQNCSQLKVLDLRHNKLAEIPPVIYR-LRSLTTLYLRFNRITA 310

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
           + ++     L +L  L LR  ++RE  + I  L  L  LD+S N L+ +PE   N  +L+
Sbjct: 311 VADD--LRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLS 368

Query: 364 ELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            LDL  N +  +P  +G L+ SL  L +  N L S+  T+
Sbjct: 369 ALDLQHNELLDIPDSIGNLK-SLVRLGMRYNRLSSVPATL 407



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 118/281 (41%), Gaps = 62/281 (22%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E N++  +   + +    LT+L   +N+L  +P  IG+   ++ L+L  N +  +P 
Sbjct: 464 INLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPD 523

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I    +L    + NN L  +P  +G L                       RL +LDL  
Sbjct: 524 DIMNLQNLEILILSNNMLKKIPNTIGNLR----------------------RLRILDLEE 561

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N +  LP EIG +  L++L+L  N +  L         P  + +L +             
Sbjct: 562 NRIEVLPHEIGLLHELQRLILQTNQITML---------PRSIGHLGN------------- 599

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCA 242
                   T LSV+         NL  +P EI     +  L +++N  +++LP EL+ C 
Sbjct: 600 -------LTHLSVSEN-------NLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQ 645

Query: 243 SLQTLILSRNKIKDWPDAILTSLSS--LSCLKLDNNPLRQV 281
           +L+ L + +  +   P  I     S  L  LK+ ++P RQ+
Sbjct: 646 NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKM-HSPYRQI 685


>gi|302795083|ref|XP_002979305.1| hypothetical protein SELMODRAFT_418921 [Selaginella moellendorffii]
 gi|300153073|gb|EFJ19713.1| hypothetical protein SELMODRAFT_418921 [Selaginella moellendorffii]
          Length = 1243

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 128/380 (33%), Positives = 197/380 (51%), Gaps = 35/380 (9%)

Query: 29  IASKNLLNGMPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALSA-LPA 86
           +A+ +L   +P  IG+L++L  L L QN+++  IP+ +    +L   Y+ +N L+  +P 
Sbjct: 169 LANNSLTGVIPPEIGNLTQLTVLYLQQNQLVGKIPAELCDLTALEALYLHSNYLTGPIPP 228

Query: 87  ELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLL 143
           ELG+L KL  L L SN+L     E  A    L  L LS NSLSG +PP IG    LR L 
Sbjct: 229 ELGRLKKLAVLLLFSNELTGSIPETLANLTNLEALVLSENSLSGSIPPAIGSFPVLRVLY 288

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRS-------------RLPENEDSEASTTKEDLITM 190
           L  N L  L    + G  P L KY  S             RL  N        +   +  
Sbjct: 289 LDSNNLSGLIPPEI-GLLPCLQKYCSSNPTNAYFNGPPAIRLFSNNLQGPIPPEIGNLQS 347

Query: 191 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE-LPPELSSCASLQTLIL 249
              L ++S +LS        IP E+     +  LDL  N++   +PP++S  + L+ L L
Sbjct: 348 LEILELSSNQLS------GGIPPELGNMTSLVHLDLQFNNLSGPIPPDISLLSRLEVLSL 401

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPMLQILDLSYN--IASLPE 306
             N++       +  L SL  + L NN L   +P+D  + + ML  +DL +N    S+P+
Sbjct: 402 GYNRLSGAIPYEVGLLFSLRLMYLPNNSLSGHIPAD-LEHLKMLTQVDLDFNELTGSIPK 460

Query: 307 NPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTE 364
              F  LP+LQ L+L++ +L+ + P ++ +L+ LR L+L  N+L S IP    +LT L++
Sbjct: 461 QLGF--LPNLQALFLQQNKLQGSIPPELGQLRSLRFLNLGNNNLTSTIPRELSSLTGLSQ 518

Query: 365 LDLSDNNIS-ALPPELGLLE 383
           L L++N++S A+PPELGLL+
Sbjct: 519 LLLNNNSLSGAIPPELGLLQ 538



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 193/455 (42%), Gaps = 91/455 (20%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSAL-P 85
           L+ S  L   +PET+ +L+ L  L L +N +  SIP +I     L   Y+ +N LS L P
Sbjct: 240 LLFSNELTGSIPETLANLTNLEALVLSENSLSGSIPPAIGSFPVLRVLYLDSNNLSGLIP 299

Query: 86  AELGKLSKLG----------------TLDLHSNQLKE-YCVEACQLR-LSVLDLSNNSLS 127
            E+G L  L                  + L SN L+     E   L+ L +L+LS+N LS
Sbjct: 300 PEIGLLPCLQKYCSSNPTNAYFNGPPAIRLFSNNLQGPIPPEIGNLQSLEILELSSNQLS 359

Query: 128 G-LPPEIGKMTTLRKLLLTGNPLR----------------TLRSSLVNGPTP---ALLKY 167
           G +PPE+G MT+L  L L  N L                 +L  + ++G  P    LL  
Sbjct: 360 GGIPPELGNMTSLVHLDLQFNNLSGPIPPDISLLSRLEVLSLGYNRLSGAIPYEVGLLFS 419

Query: 168 LR-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
           LR   LP N  S       + + M T++ +   EL+       +IP ++     +  L L
Sbjct: 420 LRLMYLPNNSLSGHIPADLEHLKMLTQVDLDFNELT------GSIPKQLGFLPNLQALFL 473

Query: 227 SRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV--PS 283
            +N +Q  +PPEL    SL+ L L  N +       L+SL+ LS L L+NN L     P 
Sbjct: 474 QQNKLQGSIPPELGQLRSLRFLNLGNNNLTSTIPRELSSLTGLSQLLLNNNSLSGAIPPE 533

Query: 284 DGFKDIPMLQ-------------ILDLSYNIASLPENPPFS------------------- 311
            G    P+                +DLS N  S P  P                      
Sbjct: 534 LGLLQFPLYSSLPEHVHFVSDQSAMDLSGNYLSGPVPPELGNCSLLTVLNLADNLLTGTV 593

Query: 312 -----SLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTE 364
                SL  L  L L   QL  + P+ +     L  + L  N L  +IPE F  LT L  
Sbjct: 594 PEELGSLSFLASLVLENNQLEGKVPSSLGNCSGLIAIRLGHNRLTGTIPESFGLLTHLQT 653

Query: 365 LDLSDNNISA-LPPELGLLEPSLQALRLDGNPLRS 398
           LD+S N ++  +PP++GL + SL +L L+ N L+ 
Sbjct: 654 LDMSFNGLTGKIPPQIGLCK-SLLSLALNDNALKG 687



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 172/390 (44%), Gaps = 55/390 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 59
           ++++D++ N+LT      +     L  L   +N L G +P  +G L  L  L+L  N + 
Sbjct: 444 LTQVDLDFNELTGSIPKQLGFLPNLQALFLQQNKLQGSIPPELGQLRSLRFLNLGNNNLT 503

Query: 60  S-IPSSISGCCSLAEFYMGNNALS-ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS 117
           S IP  +S    L++  + NN+LS A+P ELG L       L+S+  +     + Q   S
Sbjct: 504 STIPRELSSLTGLSQLLLNNNSLSGAIPPELGLLQ----FPLYSSLPEHVHFVSDQ---S 556

Query: 118 VLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP---ALLKYLRSRLP 173
            +DLS N LSG +PPE+G  + L  L L  N        L+ G  P     L +L S + 
Sbjct: 557 AMDLSGNYLSGPVPPELGNCSLLTVLNLADN--------LLTGTVPEELGSLSFLASLVL 608

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ- 232
           EN   E       L   +  +++      L G     IP        +  LD+S N +  
Sbjct: 609 ENNQLEGKV-PSSLGNCSGLIAIRLGHNRLTG----TIPESFGLLTHLQTLDMSFNGLTG 663

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
           ++PP++  C SL +L L+ N +K    +I T L++L                     P+L
Sbjct: 664 KIPPQIGLCKSLLSLALNDNALK---GSIPTELTTL---------------------PIL 699

Query: 293 QILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSL-Q 350
           Q   +++N  +    P   SL  LQ L L    L  + P  +  ++ LR L LS N L  
Sbjct: 700 QFASMAHNKLTGVIPPTLDSLAQLQVLNLEGNMLSGSIPARVGAIRDLRELVLSSNRLSD 759

Query: 351 SIPEGFKNLTSLTELDLSDNNISA-LPPEL 379
           +IP    +L  L  L L  NN +  +PP L
Sbjct: 760 NIPSSLGSLLFLRVLLLDKNNFTGTIPPTL 789



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 128/307 (41%), Gaps = 51/307 (16%)

Query: 132 EIGKMTTLRKLLLTGNPLRT----------------LRSSLVNGPTPALLKYLRS----R 171
           +IG ++ L KL L GN L                  L S+L+ G  P  L  L+      
Sbjct: 109 DIGSLSKLEKLALPGNRLSGRIPVELSILQNLVSLDLSSNLLWGTIPVELGSLQKLKALS 168

Query: 172 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 231
           L  N  +     +   +T  T L +   +L      +  IP+E+ +   +  L L  N +
Sbjct: 169 LANNSLTGVIPPEIGNLTQLTVLYLQQNQL------VGKIPAELCDLTALEALYLHSNYL 222

Query: 232 QE-LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
              +PPEL     L  L+L  N++       L +L++L  L L  N L           P
Sbjct: 223 TGPIPPELGRLKKLAVLLLFSNELTGSIPETLANLTNLEALVLSENSLSGSIPPAIGSFP 282

Query: 291 MLQILDLSYN-------------------IASLPENPPFSSLPHLQELYLRRMQLREAPT 331
           +L++L L  N                    +S P N  F+  P ++ L+   +Q    P 
Sbjct: 283 VLRVLYLDSNNLSGLIPPEIGLLPCLQKYCSSNPTNAYFNGPPAIR-LFSNNLQ-GPIPP 340

Query: 332 DILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQAL 389
           +I  LQ L IL+LS N L   IP    N+TSL  LDL  NN+S  +PP++ LL   L+ L
Sbjct: 341 EIGNLQSLEILELSSNQLSGGIPPELGNMTSLVHLDLQFNNLSGPIPPDISLLS-RLEVL 399

Query: 390 RLDGNPL 396
            L  N L
Sbjct: 400 SLGYNRL 406



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 106/222 (47%), Gaps = 12/222 (5%)

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCA 242
           +++   +   +S+   + SL+G  L     +I    ++ KL L  N +   +P ELS   
Sbjct: 82  RDNSTGLVQVVSIVLPKASLDGGFLVG---DIGSLSKLEKLALPGNRLSGRIPVELSILQ 138

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-- 300
           +L +L LS N +       L SL  L  L L NN L  V      ++  L +L L  N  
Sbjct: 139 NLVSLDLSSNLLWGTIPVELGSLQKLKALSLANNSLTGVIPPEIGNLTQLTVLYLQQNQL 198

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ-SIPEGFKN 358
           +  +P       L  L+ LYL    L    P ++ RL++L +L L  N L  SIPE   N
Sbjct: 199 VGKIPAE--LCDLTALEALYLHSNYLTGPIPPELGRLKKLAVLLLFSNELTGSIPETLAN 256

Query: 359 LTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGNPLRSI 399
           LT+L  L LS+N++S  +PP +G   P L+ L LD N L  +
Sbjct: 257 LTNLEALVLSENSLSGSIPPAIGSF-PVLRVLYLDSNNLSGL 297


>gi|359461194|ref|ZP_09249757.1| Miro domain-containing protein [Acaryochloris sp. CCMEE 5410]
          Length = 448

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 176/364 (48%), Gaps = 28/364 (7%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P  IG L  +  + L  N + ++P  I     L    +    L+ LP E+G+LS L +L
Sbjct: 98  LPPDIGQLRHVQIIYLVGNSLQTLPPEIGQLKQLKTLNLSGGNLNRLPPEIGQLSNLQSL 157

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR--- 153
           +L+ NQL+    E  QL+ L  LD+ NN LS LPPEIG +  L++L L  N L+TL    
Sbjct: 158 NLYKNQLRTLPPEIGQLKQLQRLDIRNNRLSALPPEIGGLQNLKRLTLHHNQLKTLPPEI 217

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
             L N    A+      RLP           E+L++           L L    L  +P 
Sbjct: 218 GELKNLQKLAVDYNQLHRLPVEIGQ-----LENLVS-----------LGLPYNKLKHLPV 261

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
            I +   +  L L+ N +  LPPE+S    L+ L L+ NK++ +P  I+  L++L  L L
Sbjct: 262 SIGQLNNLQVLGLNFNQLTHLPPEISQLHRLEVLSLTSNKLQRFPTEII-HLTNLEVLHL 320

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
             +P     S  F    + +    ++N ++SLP  P    L  LQ+L L    L   P +
Sbjct: 321 GASPESLAFSVQFH---LKEEYATTFNQVSSLP--PEIGQLTQLQDLNLGSCTLLNLPPE 375

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
           I +L  L++L LS N L S+P     L +L  L+LS N + +LPPEL  L   L+ L L 
Sbjct: 376 IGQLVNLQMLGLSNNGLMSVPHEIGRLANLQGLELSYNQLKSLPPELKALT-RLEYLNLS 434

Query: 393 GNPL 396
            NPL
Sbjct: 435 NNPL 438



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 142/330 (43%), Gaps = 65/330 (19%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           GN L  L    I     L  L  S   LN +P  IG LS L  L+L++N++ ++P  I  
Sbjct: 115 GNSLQTLPPE-IGQLKQLKTLNLSGGNLNRLPPEIGQLSNLQSLNLYKNQLRTLPPEIGQ 173

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR------------ 115
              L    + NN LSALP E+G L  L  L LH NQLK    E  +L+            
Sbjct: 174 LKQLQRLDIRNNRLSALPPEIGGLQNLKRLTLHHNQLKTLPPEIGELKNLQKLAVDYNQL 233

Query: 116 -----------------------------------LSVLDLSNNSLSGLPPEIGKMTTLR 140
                                              L VL L+ N L+ LPPEI ++  L 
Sbjct: 234 HRLPVEIGQLENLVSLGLPYNKLKHLPVSIGQLNNLQVLGLNFNQLTHLPPEISQLHRLE 293

Query: 141 KLLLTGNPLRTLRSSLVN---------GPTPALLKY-LRSRLPENEDSEASTTKEDLITM 190
            L LT N L+   + +++         G +P  L + ++  L E    E +TT   + ++
Sbjct: 294 VLSLTSNKLQRFPTEIIHLTNLEVLHLGASPESLAFSVQFHLKE----EYATTFNQVSSL 349

Query: 191 ATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 248
              +   +  ++L+L    L  +P EI +   +  L LS N +  +P E+   A+LQ L 
Sbjct: 350 PPEIGQLTQLQDLNLGSCTLLNLPPEIGQLVNLQMLGLSNNGLMSVPHEIGRLANLQGLE 409

Query: 249 LSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
           LS N++K  P   L +L+ L  L L NNPL
Sbjct: 410 LSYNQLKSLPPE-LKALTRLEYLNLSNNPL 438



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 148/332 (44%), Gaps = 51/332 (15%)

Query: 111 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 170
           A + + + LDL    L+ LPP+IG++  ++ + L GN L+TL       P    LK L++
Sbjct: 80  AHETKATTLDLQGLGLAELPPDIGQLRHVQIIYLVGNSLQTLP------PEIGQLKQLKT 133

Query: 171 ---------RLPENEDSEAST------TKEDLITMATRLSVTS--KELSLEGMNLSAIPS 213
                    RLP  E  + S        K  L T+   +      + L +    LSA+P 
Sbjct: 134 LNLSGGNLNRLPP-EIGQLSNLQSLNLYKNQLRTLPPEIGQLKQLQRLDIRNNRLSALPP 192

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           EI     + +L L  N ++ LPPE+    +LQ L +  N++   P  I   L +L  L L
Sbjct: 193 EIGGLQNLKRLTLHHNQLKTLPPEIGELKNLQKLAVDYNQLHRLPVEI-GQLENLVSLGL 251

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
             N L+ +P      +  LQ+L L++N +  LP  P  S L  L+ L L   +L+  PT+
Sbjct: 252 PYNKLKHLPVS-IGQLNNLQVLGLNFNQLTHLP--PEISQLHRLEVLSLTSNKLQRFPTE 308

Query: 333 ILRLQQLRILDLSQ---------------------NSLQSIPEGFKNLTSLTELDLSDNN 371
           I+ L  L +L L                       N + S+P     LT L +L+L    
Sbjct: 309 IIHLTNLEVLHLGASPESLAFSVQFHLKEEYATTFNQVSSLPPEIGQLTQLQDLNLGSCT 368

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           +  LPPE+G L  +LQ L L  N L S+   I
Sbjct: 369 LLNLPPEIGQLV-NLQMLGLSNNGLMSVPHEI 399



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 6/206 (2%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           + L G +L  +P EI +  ++  L+LS  ++  LPPE+   ++LQ+L L +N+++  P  
Sbjct: 111 IYLVGNSLQTLPPEIGQLKQLKTLNLSGGNLNRLPPEIGQLSNLQSLNLYKNQLRTLPPE 170

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I   L  L  L + NN L  +P +    +  L+ L L +N + +LP  P    L +LQ+L
Sbjct: 171 I-GQLKQLQRLDIRNNRLSALPPE-IGGLQNLKRLTLHHNQLKTLP--PEIGELKNLQKL 226

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            +   QL   P +I +L+ L  L L  N L+ +P     L +L  L L+ N ++ LPPE+
Sbjct: 227 AVDYNQLHRLPVEIGQLENLVSLGLPYNKLKHLPVSIGQLNNLQVLGLNFNQLTHLPPEI 286

Query: 380 GLLEPSLQALRLDGNPLRSIRRTILD 405
             L   L+ L L  N L+     I+ 
Sbjct: 287 SQLH-RLEVLSLTSNKLQRFPTEIIH 311


>gi|421090942|ref|ZP_15551731.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000269|gb|EKO50914.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 400

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 173/373 (46%), Gaps = 48/373 (12%)

Query: 39  PETIGSLSRLIR-------LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           P+T   L+  I+       LDL Q ++ ++P  I    +L E Y+  N L  LP E+G+L
Sbjct: 32  PKTYMDLTEAIQNPLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQL 91

Query: 92  SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
             L  L+L  NQLK    E  QL+ L  L LS N L  LP EI ++  L++L L  N L 
Sbjct: 92  QNLRVLELIHNQLKTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLT 151

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
           TL + +        LK L+                               L L    L  
Sbjct: 152 TLPTEI------GQLKNLQR------------------------------LHLWNNQLMT 175

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +P EI +   +  L+LS N I+ +P E+     LQ+L L  N++   P+ I   L  L  
Sbjct: 176 LPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEI-GQLQKLQE 234

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 330
           L L  N L  +P++    +  LQ L L  N  ++  N     L +LQ LYLR  +L    
Sbjct: 235 LSLSTNRLTTLPNE-IGQLQNLQDLYLGSNQLTILPNE-IGQLKNLQTLYLRSNRLTTLS 292

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            DI +LQ L+ LDL  N L + P+  + L +L  LDL  N ++ LP E+G L+ +LQ   
Sbjct: 293 KDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLK-NLQVFE 351

Query: 391 LDGNPLRSIRRTI 403
           L+ N L ++ + I
Sbjct: 352 LNNNQLTTLPKEI 364



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 179/396 (45%), Gaps = 65/396 (16%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+   KL  L    I     L EL  S N L  +P+ IG L  L  L+L  N++ ++P 
Sbjct: 51  LDLSQQKLKTLPKE-IGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPE 109

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L   Y+  N L  LP E+ +L  L  L L  NQL     E  QL+ L  L L 
Sbjct: 110 EIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLW 169

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN L  LP EIG++  L+ L L+ N ++T+   +        L+ L+S            
Sbjct: 170 NNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEK------LQKLQS------------ 211

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                             L L    L+A+P+EI +  ++ +L LS N +  LP E+    
Sbjct: 212 ------------------LGLGNNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQ 253

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           +LQ L L  N++   P+ I   L +L  L L +N L  +     KDI  LQ         
Sbjct: 254 NLQDLYLGSNQLTILPNEI-GQLKNLQTLYLRSNRLTTLS----KDIEQLQ--------- 299

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
                       +L+ L L   QL   P +I +L+ L++LDL  N L ++P+    L +L
Sbjct: 300 ------------NLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNL 347

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
              +L++N ++ LP E+G L+ +LQ L L  N L S
Sbjct: 348 QVFELNNNQLTTLPKEIGQLQ-NLQELYLIDNQLSS 382



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 121/279 (43%), Gaps = 39/279 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+LT L    I     L  L    N L  +PE IG L  L  L+L  N+I +
Sbjct: 140 LQELYLRDNQLTTLPTE-IGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKT 198

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           IP  I     L    +GNN L+ALP E+G+L KL  L L +N+L     E  QL+ L  L
Sbjct: 199 IPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDL 258

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +N L+ LP EIG++  L+ L L  N L TL   +                       
Sbjct: 259 YLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDI----------------------- 295

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        K L L    L+  P EI +   +  LDL  N +  LP E+ 
Sbjct: 296 -----EQLQNL--------KSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIG 342

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
              +LQ   L+ N++   P  I   L +L  L L +N L
Sbjct: 343 QLKNLQVFELNNNQLTTLPKEI-GQLQNLQELYLIDNQL 380


>gi|348524990|ref|XP_003450005.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Oreochromis
           niloticus]
          Length = 570

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 200/425 (47%), Gaps = 48/425 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +   + L  L  S+N L  +P+++ SL +L  LDL  N++  
Sbjct: 113 LTELYLYSNKLQSLPAE-VGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNKLRE 171

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 172 IPPVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCSLITL 231

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L                    PE   + 
Sbjct: 232 DVAHNQLEHLPKEIGHCTQITNLDLQHNELLDL--------------------PETIGNL 271

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
           AS  +                L L    LSAIP  + +  E+ +L+L  N+I  LP  L 
Sbjct: 272 ASINR----------------LGLRYNRLSAIPRSLAQCRELEELNLENNNISVLPEGLL 315

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS  +L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 316 SSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 375

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + +LP +  F +   + EL L   QL + P DI  L  L +L LS N L+ +P G  
Sbjct: 376 DNQLTALPLD--FGTWTSMVELNLATNQLTKIPEDICGLASLEVLILSNNLLKKLPHGIG 433

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           NL  L ELDL +N +  LP E+  L+  LQ L L  N L     T+L RG   +L     
Sbjct: 434 NLRKLRELDLEENKLECLPNEIAYLK-DLQKLVLTNNQL-----TMLPRGIGHLLNLTHL 487

Query: 418 KIPEN 422
            + EN
Sbjct: 488 GLGEN 492



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +P+ I E  ++T+L L  N +Q LP E+   + L TL LS N +   
Sbjct: 90  STRLDLSKRSIHTLPTSIKELTQLTELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSL 149

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L SL  L  L L +N LR++P   ++ +  L  L L +N  +  E     +L  L 
Sbjct: 150 PDS-LDSLKKLRMLDLRHNKLREIPPVVYR-LTSLTTLYLRFNRITTVEK-DIRNLSKLT 206

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   + T +T LDL  N +  LP 
Sbjct: 207 MLSIRENKIKQLPAEIGELCSLITLDVAHNQLEHLPKEIGHCTQITNLDLQHNELLDLPE 266

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  S+  L L  N L +I R++
Sbjct: 267 TIGNLA-SINRLGLRYNRLSAIPRSL 291



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 348 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLDFGTWTSMVELNLATNQLTKIPE 407

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I G  SL    + NN L  LP  +G L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 408 DICGLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLT 467

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +  L  L L  N L+ L
Sbjct: 468 NNQLTMLPRGIGHLLNLTHLGLGENQLQHL 497


>gi|195056017|ref|XP_001994909.1| GH17496 [Drosophila grimshawi]
 gi|261277886|sp|B4JTV9.1|SUR8_DROGR RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|193892672|gb|EDV91538.1| GH17496 [Drosophila grimshawi]
          Length = 622

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 195/406 (48%), Gaps = 20/406 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  + +TVL N  +     LTEL    N +  +P  IG L  L  L L++N + S
Sbjct: 143 IKRLDLSKSSITVLPNT-VRECVHLTELYLYSNKIGQLPTEIGCLVNLRNLALNENSLTS 201

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S+  C  L    + +N L+ +P+ + +L  L TL L  N++     +  QL  L++L
Sbjct: 202 LPESLKHCTQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITTVADDLRQLVNLTML 261

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N +  L   IG +  L  L ++ N L  L   + N    + L    + L +  DS 
Sbjct: 262 SLRENKIKELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 321

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-L 238
            +   + L+ +  R +            L+ +P  +     + + ++  N I +LP   L
Sbjct: 322 GNL--KSLVRLGLRYN-----------RLNCVPVSLKNCKSMDEFNVEGNGITQLPDGML 368

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +S ++L ++ LSRN+   +P       +++  + L++N + ++P   F     L  L++ 
Sbjct: 369 ASLSALTSITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMK 428

Query: 299 YNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N+  +LP +    +  ++ EL L    L++ P DI+ LQ L IL LS N L+ IP    
Sbjct: 429 ENMLTALPLD--VGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 486

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L  LDL +N I  LP E+GLL   LQ L L  N +  + R++
Sbjct: 487 NLRKLRILDLEENRIEVLPHEIGLLH-ELQRLILQTNQITMLPRSV 531



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E N++  +   + +    LT+L   +N+L  +P  +G+   ++ L+L  N +  +P 
Sbjct: 401 INLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDVGTWVNMVELNLATNALQKLPD 460

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    + NN L  +P  +G L KL  LDL  N+++    E   L  L  L L 
Sbjct: 461 DIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQ 520

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
            N ++ LP  +G ++ L  L ++ N L+ L
Sbjct: 521 TNQITMLPRSVGHLSNLTHLSVSENNLQFL 550



 Score = 38.1 bits (87), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           R + ++ LDLS++S+  +P   +    LTEL L  N I  LP E+G L  +L+ L L+ N
Sbjct: 139 RDEGIKRLDLSKSSITVLPNTVRECVHLTELYLYSNKIGQLPTEIGCLV-NLRNLALNEN 197

Query: 395 PLRSIRRTILDRGTKAVLKYLKDKIPE 421
            L S+  ++       VL    +K+ E
Sbjct: 198 SLTSLPESLKHCTQLKVLDLRHNKLAE 224


>gi|118399299|ref|XP_001031975.1| Leucine Rich Repeat family protein [Tetrahymena thermophila]
 gi|89286311|gb|EAR84312.1| Leucine Rich Repeat family protein [Tetrahymena thermophila SB210]
          Length = 5365

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 218/440 (49%), Gaps = 30/440 (6%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRIL 59
            + K+D+  NK++ +     +   +L  LI SKNL+  + E    +L  L+ L L QNR++
Sbjct: 1720 LKKVDLSENKISHIPQPAFSGCLLLENLILSKNLIQQIDEGAFQNLKSLVNLYLDQNRLV 1779

Query: 60   SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK--EYCVEACQLRLS 117
                 +     L +  +  N + +   +   +  L  L +++N+LK  +  +  C+  + 
Sbjct: 1780 EF-QEVPQSEKLDQLVLSYNRIESF-TQFENIPNLSALVINNNKLKNLDKSILICK-NIK 1836

Query: 118  VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
             LDL+NN L  +P EIG +  L +  + GNPL+ +R+++ N    A+ KYLR R+  +  
Sbjct: 1837 TLDLTNNDLPDIPSEIGLLPKLVRFTVEGNPLKCIRNTIKNAGAEAIKKYLRDRIQGDYT 1896

Query: 178  SEAST---------TKEDLITMATRLSVTSKELSLEGMNLSAIPSE-IWEAGEITKLDLS 227
               S           K D I +  R    + E  +   NL+    E ++    +T LD+S
Sbjct: 1897 QVESAMDPKMNFIQKKLDPIEVLLREFYRNNEFIVSNQNLTKFDDERLYNLKGLTHLDIS 1956

Query: 228  RNSIQELPPELSSC-ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG- 285
             N IQ +P +L +   SL  L  + N +   P +IL  L  L  L+   N +     +  
Sbjct: 1957 NNKIQIIPEQLVNYEKSLSKLHANNNNLIALPQSIL-QLRQLQSLEFKQNNIEYFFDNNS 2015

Query: 286  -----FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE-AP--TDILRLQ 337
                 ++  P LQ LDLS N          S +P L+ L L   Q+ + +P  +   +L 
Sbjct: 2016 QLKQCWQVFPNLQHLDLSINKLKSISGLIISFMPSLRVLNLAYNQISDLSPLFSTSAKLN 2075

Query: 338  QLRILDLSQNSLQSIPEGFK-NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            +L ++D+S NSLQ + E     L  L  L+L +NN+  +P ELG ++  L+ L++DGNPL
Sbjct: 2076 KLEVIDVSNNSLQELSEQIAYTLPMLQNLNLENNNLQKIPTELGFMK--LKTLKIDGNPL 2133

Query: 397  RSIRRTILDRGTKAVLKYLK 416
            + I+R ++++GT ++L YL+
Sbjct: 2134 KLIKRAVIEKGTVSILDYLR 2153



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 161/378 (42%), Gaps = 98/378 (25%)

Query: 48   LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE- 106
            L +LDL  N I  IP   +    +    M NN L  LP  L +L++L ++D   NQ+K+ 
Sbjct: 1606 LTKLDLSNNEIKQIPEDFTHEKEIQLVRMLNNKLFTLPNSLFQLTQLKSIDFSKNQIKQL 1665

Query: 107  -YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
             Y +  C   L  ++LS N +  LP  +  +  L  L L+ N LR +         P  L
Sbjct: 1666 PYSLVQC-PSLVEINLSENKIEELPMNMHYLQNLEILNLSQNNLRAV---------PIFL 1715

Query: 166  KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
            +                         T L    K++ L    +S IP             
Sbjct: 1716 E------------------------KTPL----KKVDLSENKISHIPQ------------ 1735

Query: 226  LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
                      P  S C  L+ LILS+N I+   +    +L SL  L LD N L +     
Sbjct: 1736 ----------PAFSGCLLLENLILSKNLIQQIDEGAFQNLKSLVNLYLDQNRLVE----- 1780

Query: 286  FKDIPMLQILD---LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
            F+++P  + LD   LSYN I S  +   F ++P+L  L +   +L+     IL  + ++ 
Sbjct: 1781 FQEVPQSEKLDQLVLSYNRIESFTQ---FENIPNLSALVINNNKLKNLDKSILICKNIKT 1837

Query: 342  LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
            LDL+ N                  DL D     +P E+GLL P L    ++GNPL+ IR 
Sbjct: 1838 LDLTNN------------------DLPD-----IPSEIGLL-PKLVRFTVEGNPLKCIRN 1873

Query: 402  TILDRGTKAVLKYLKDKI 419
            TI + G +A+ KYL+D+I
Sbjct: 1874 TIKNAGAEAIKKYLRDRI 1891



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 96/414 (23%), Positives = 183/414 (44%), Gaps = 37/414 (8%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 59
            ++KLD+  N++  +  +      + L  ++ +K  L  +P ++  L++L  +D  +N+I 
Sbjct: 1606 LTKLDLSNNEIKQIPEDFTHEKEIQLVRMLNNK--LFTLPNSLFQLTQLKSIDFSKNQIK 1663

Query: 60   SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 119
             +P S+  C SL E  +  N +  LP  +  L  L  L+L  N L+   +   +  L  +
Sbjct: 1664 QLPYSLVQCPSLVEINLSENKIEELPMNMHYLQNLEILNLSQNNLRAVPIFLEKTPLKKV 1723

Query: 120  DLSNNSLSGLP-PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL-RSRLPENED 177
            DLS N +S +P P       L  L+L+ N ++ +           +  YL ++RL E ++
Sbjct: 1724 DLSENKISHIPQPAFSGCLLLENLILSKNLIQQIDEGAFQNLKSLVNLYLDQNRLVEFQE 1783

Query: 178  SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
               S   + L+    R+   ++           IP+       ++ L ++ N ++ L   
Sbjct: 1784 VPQSEKLDQLVLSYNRIESFTQ--------FENIPN-------LSALVINNNKLKNLDKS 1828

Query: 238  LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR----QVPSDGFKDIPMLQ 293
            +  C +++TL L+ N + D P  I   L  L    ++ NPL+     + + G + I    
Sbjct: 1829 ILICKNIKTLDLTNNDLPDIPSEIGL-LPKLVRFTVEGNPLKCIRNTIKNAGAEAIKKY- 1886

Query: 294  ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL---SQNSLQ 350
               L   I        ++ +    +  +  +Q +  P ++L  +  R  +    +QN  +
Sbjct: 1887 ---LRDRIQG-----DYTQVESAMDPKMNFIQKKLDPIEVLLREFYRNNEFIVSNQNLTK 1938

Query: 351  SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
               E   NL  LT LD+S+N I  +P +L   E SL  L  + N L ++ ++IL
Sbjct: 1939 FDDERLYNLKGLTHLDISNNKIQIIPEQLVNYEKSLSKLHANNNNLIALPQSIL 1992



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 23/151 (15%)

Query: 253  KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
            ++K++P  I    +    L+LD         D + +I  L  LDLS N I  +PE+    
Sbjct: 1580 ELKEFPKQI----AQYQDLQLD---------DNWWEIAPLTKLDLSNNEIKQIPED---- 1622

Query: 312  SLPHLQELYLRRM---QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 368
               H +E+ L RM   +L   P  + +L QL+ +D S+N ++ +P       SL E++LS
Sbjct: 1623 -FTHEKEIQLVRMLNNKLFTLPNSLFQLTQLKSIDFSKNQIKQLPYSLVQCPSLVEINLS 1681

Query: 369  DNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            +N I  LP  +  L+ +L+ L L  N LR++
Sbjct: 1682 ENKIEELPMNMHYLQ-NLEILNLSQNNLRAV 1711


>gi|71981160|ref|NP_741391.2| Protein SOC-2, isoform b [Caenorhabditis elegans]
 gi|351065206|emb|CCD61152.1| Protein SOC-2, isoform b [Caenorhabditis elegans]
          Length = 558

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 225/461 (48%), Gaps = 49/461 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKLT L    I     L +L  S+N L  +P+++ SL  L  LDL  N++  
Sbjct: 97  LTELFLYKNKLTCLPTE-IGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTE 155

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------------YC 108
           +PS I    SL   ++  N + A+  ++G LSKL  LD+  N+++E             C
Sbjct: 156 VPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVC 215

Query: 109 -------------VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
                        +  C   L+ LDL +N LS LP  IGK+  L ++ +  N +R + S 
Sbjct: 216 LVSYNHLTRVPEEIGDCH-SLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSE 274

Query: 156 LVNGPTPALLKYLRSR-----LPEN------EDSEASTTKEDLITM---ATRLSVTSKEL 201
           L +     L +++        LP N      +    + ++ +L        +  V++  +
Sbjct: 275 LES--CQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTI 332

Query: 202 SLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           ++E   +S IP  I+ +A  +TKL+L  N +  LP ++ S  S+  L LS N++K  P+ 
Sbjct: 333 NMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPED 392

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 320
           I   L +L  L L NN L+++P+       + ++      + ++P    F  L HL +L+
Sbjct: 393 I-EKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGF--LQHLTKLW 449

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 379
           ++  ++   P  I  L  L+ L L +N+L +IPE   +L SL  L L+DN ++  LP EL
Sbjct: 450 VQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFEL 509

Query: 380 GLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            L + SL+ + ++ +PL  I   I   G   V++YLK + P
Sbjct: 510 ALCQ-SLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGP 549



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 170/364 (46%), Gaps = 39/364 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   T LTEL   KN L  +P  IG L  L +L L +N + S+P S++   SL    + +
Sbjct: 91  IKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRH 150

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+ +P+ + K+  L TL L  N++     +   L +L +LD+  N +  LP  IGK+T
Sbjct: 151 NKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLT 210

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +L   L++ N L                    +R+PE      S T              
Sbjct: 211 SLVVCLVSYNHL--------------------TRVPEEIGDCHSLT-------------- 236

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             +L L+  +LS +P  I +   + ++ +  N I+ +P EL SC  L+  I+  N ++  
Sbjct: 237 --QLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLL 294

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P  +LT L  +  + L  N L   P+ G +       +++ +N I+ +P    FS    L
Sbjct: 295 PPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIG-IFSKATRL 353

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
            +L L+  +L   P D+     +  L+LS N L+ +PE  + L +L  L LS+N +  LP
Sbjct: 354 TKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLP 413

Query: 377 PELG 380
            ++G
Sbjct: 414 NQIG 417



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 105/185 (56%), Gaps = 5/185 (2%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           + L L  + +++IPS I E  ++T+L L +N +  LP E+    +L+ L LS N +   P
Sbjct: 75  QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 134

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
           D+ L SL SL  L L +N L +VPS  +K I  L+ L L YN I ++ E     +L  L+
Sbjct: 135 DS-LASLESLETLDLRHNKLTEVPSVIYK-IGSLETLWLRYNRIVAVDEQ--IGNLSKLK 190

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++RE P+ I +L  L +  +S N L  +PE   +  SLT+LDL  N++S LP 
Sbjct: 191 MLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPY 250

Query: 378 ELGLL 382
            +G L
Sbjct: 251 SIGKL 255



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 1/92 (1%)

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           Q L L  +++   P+ I  L QL  L L +N L  +P     L +L +L LS+N +++LP
Sbjct: 75  QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 134

Query: 377 PELGLLEPSLQALRLDGNPLRSIRRTILDRGT 408
             L  LE SL+ L L  N L  +   I   G+
Sbjct: 135 DSLASLE-SLETLDLRHNKLTEVPSVIYKIGS 165


>gi|197100985|ref|NP_001126707.1| leucine-rich repeat protein SHOC-2 [Pongo abelii]
 gi|55732408|emb|CAH92905.1| hypothetical protein [Pongo abelii]
          Length = 582

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 194/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENALTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  S+ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 283 --------------LSSLSR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENALTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPRSL 303



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 149/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534


>gi|379730485|ref|YP_005322681.1| hypothetical protein SGRA_2368 [Saprospira grandis str. Lewin]
 gi|378576096|gb|AFC25097.1| leucine-rich repeat-containing protein [Saprospira grandis str.
           Lewin]
          Length = 509

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 118/360 (32%), Positives = 178/360 (49%), Gaps = 21/360 (5%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L +L AS+  L  +P+ IG    + +L++  NR+  +P S++    L    + +N LS L
Sbjct: 18  LKKLDASRKGLQELPQEIGRSKGMKQLNIEDNRLKDLPDSLANLGQLEWLDISDNRLSPL 77

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  L +L KL  LDL +N L E   E A    L  LDL NN L  LP   G++  LRKLL
Sbjct: 78  PKVLFQLRKLRWLDLSNNGLSELGEELAAWEELMRLDLKNNQLQALPNNFGQLKALRKLL 137

Query: 144 LTGNPLRTLRSSL---VNGPTPALLKYLRSRLPENEDSEASTTKE---------DLITMA 191
           L  N L  L +S           L +   ++LPE E  +  + K+          L  + 
Sbjct: 138 LERNQLSALPASFGQLQQLQQLDLSENAFTQLPE-EIGQLKSLKQLSLSANPMPQLTKVL 196

Query: 192 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 251
            +LS   +EL  EG+ L  +P EI +   +  L L  N ++ L  EL +C++L+ L L  
Sbjct: 197 GQLS-NLEELQAEGLGLEEVPKEIGQLNNLQSLFLGYNRLKSLAAELGNCSALEQLDLGN 255

Query: 252 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY-NIASLPENPPF 310
           N+++  P   L     L  L L++NPL ++P    ++I  L+ LD+S  N+  L      
Sbjct: 256 NRLERLP-LNLARCQQLKVLNLEDNPLGELPL-LLQEIQALEELDMSNCNLVDLGAG--- 310

Query: 311 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
            SLP L  L L   QLR+ P++  +L  L  LDL  N LQ  P+  + L+ + +L L+ N
Sbjct: 311 LSLPALHWLDLSANQLRDLPSNFGQLTALNWLDLRDNQLQKWPKALEGLSQIRQLLLAGN 370



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 190/409 (46%), Gaps = 30/409 (7%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N L+ L   L A+W  L  L    N L  +P   G L  L +L L +N++ ++P+
Sbjct: 90  LDLSNNGLSELGEEL-AAWEELMRLDLKNNQLQALPNNFGQLKALRKLLLERNQLSALPA 148

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
           S      L +  +  NA + LP E+G+L  L  L L +N + +      QL  L  L   
Sbjct: 149 SFGQLQQLQQLDLSENAFTQLPEEIGQLKSLKQLSLSANPMPQLTKVLGQLSNLEELQAE 208

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
              L  +P EIG++  L+ L L  N L++L + L N      L    +RL     + A  
Sbjct: 209 GLGLEEVPKEIGQLNNLQSLFLGYNRLKSLAAELGNCSALEQLDLGNNRLERLPLNLARC 268

Query: 183 TKEDLITMAT----RLSVTSKEL-SLEGMNLS-----------AIPSEIWEAGEITKLDL 226
            +  ++ +       L +  +E+ +LE +++S           ++P+  W       LDL
Sbjct: 269 QQLKVLNLEDNPLGELPLLLQEIQALEELDMSNCNLVDLGAGLSLPALHW-------LDL 321

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S N +++LP       +L  L L  N+++ WP A L  LS +  L L  N LRQ+     
Sbjct: 322 SANQLRDLPSNFGQLTALNWLDLRDNQLQKWPKA-LEGLSQIRQLLLAGNFLRQINLSDL 380

Query: 287 KDIPMLQILDLSYNIASLPE-NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
            D P L+ LDLS N   L E +  +  LP L++L L + QL + P D   L  L  LDLS
Sbjct: 381 -DWPELEELDLSKN--ELTELSGQWDKLPQLRQLNLEKNQLAQLPEDWRPLSNLEELDLS 437

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            N L S+P+    L  +  LDL +N  +  P  L  L   LQAL L  N
Sbjct: 438 DNQLDSLPQSLAELDQIQWLDLRNNQFTEFPQALLPLVGQLQALYLGEN 486



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 159/332 (47%), Gaps = 21/332 (6%)

Query: 70  SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 128
           SL +       L  LP E+G+   +  L++  N+LK+       L +L  LD+S+N LS 
Sbjct: 17  SLKKLDASRKGLQELPQEIGRSKGMKQLNIEDNRLKDLPDSLANLGQLEWLDISDNRLSP 76

Query: 129 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 188
           LP  + ++  LR L L+ N L  L   L      A  + +R  L  N+          L 
Sbjct: 77  LPKVLFQLRKLRWLDLSNNGLSELGEELA-----AWEELMRLDLKNNQLQALPNNFGQLK 131

Query: 189 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 248
            +        ++L LE   LSA+P+   +  ++ +LDLS N+  +LP E+    SL+ L 
Sbjct: 132 AL--------RKLLLERNQLSALPASFGQLQQLQQLDLSENAFTQLPEEIGQLKSLKQLS 183

Query: 249 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN 307
           LS N +      +L  LS+L  L+ +   L +VP +    +  LQ L L YN + SL   
Sbjct: 184 LSANPMPQ-LTKVLGQLSNLEELQAEGLGLEEVPKE-IGQLNNLQSLFLGYNRLKSLA-- 239

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
               +   L++L L   +L   P ++ R QQL++L+L  N L  +P   + + +L ELD+
Sbjct: 240 AELGNCSALEQLDLGNNRLERLPLNLARCQQLKVLNLEDNPLGELPLLLQEIQALEELDM 299

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           S+ N+  L   L L  P+L  L L  N LR +
Sbjct: 300 SNCNLVDLGAGLSL--PALHWLDLSANQLRDL 329



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 103/184 (55%), Gaps = 6/184 (3%)

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
           + KLD SR  +QELP E+     ++ L +  N++KD PD+ L +L  L  L + +N L  
Sbjct: 18  LKKLDASRKGLQELPQEIGRSKGMKQLNIEDNRLKDLPDS-LANLGQLEWLDISDNRLSP 76

Query: 281 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
           +P   F+ +  L+ LDLS N ++ L E    ++   L  L L+  QL+  P +  +L+ L
Sbjct: 77  LPKVLFQ-LRKLRWLDLSNNGLSELGEE--LAAWEELMRLDLKNNQLQALPNNFGQLKAL 133

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           R L L +N L ++P  F  L  L +LDLS+N  + LP E+G L+ SL+ L L  NP+  +
Sbjct: 134 RKLLLERNQLSALPASFGQLQQLQQLDLSENAFTQLPEEIGQLK-SLKQLSLSANPMPQL 192

Query: 400 RRTI 403
            + +
Sbjct: 193 TKVL 196


>gi|383856855|ref|XP_003703922.1| PREDICTED: LOW QUALITY PROTEIN: protein lap4-like [Megachile
           rotundata]
          Length = 2047

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 185/389 (47%), Gaps = 43/389 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL+   N ++ +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELLLDANHISDLPKNFFRLQRLRKLGLSDNDIHRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +  L  L   D  SN +        QLR L+VL L++ SL+ LPP+ G +  L+ L 
Sbjct: 99  PENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+TL  SL       L K  R  L +N                            
Sbjct: 159 LRENLLKTLPESLSK-----LYKLERLDLGDN---------------------------- 185

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
              ++  +P+ I +   + +L L  N +Q LPPEL    +L  L +S N+++D P+ I  
Sbjct: 186 ---DIDVLPAHIGKLPALQELWLDHNQLQHLPPELGQLKTLACLDVSENRLEDLPEEI-G 241

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
            L SL+ L L  N + ++P DG  ++  L IL +  N +++L  NP   S  +LQEL L 
Sbjct: 242 GLESLTDLHLSQNVIEKLP-DGLGELKKLTILKVDQNRLSTL--NPNIGSCENLQELILT 298

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
              L E P+ I +L  L  L++ +NSLQS+P    NL  L  L L DN +  LP E+G  
Sbjct: 299 ENFLFELPSTIGKLLNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPVEVGQC 358

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAV 411
             +L  L + GN L+ +  ++++   KAV
Sbjct: 359 T-ALHVLDVSGNRLQYLPYSLINLNLKAV 386



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 160/353 (45%), Gaps = 41/353 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +PE I +L  L   D   N I  +P+      +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LP + G L  L +L+L  N LK       +L +L  LDL +N +  LP  IGK+ 
Sbjct: 139 MSLTNLPPDFGSLEALQSLELRENLLKTLPESLSKLYKLERLDLGDNDIDVLPAHIGKLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L++L L  N L+ L   L    T A L    +RL            EDL      L   
Sbjct: 199 ALQELWLDHNQLQHLPPELGQLKTLACLDVSENRL------------EDLPEEIGGLESL 246

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           + +L L    +  +P  + E  ++T L + +N +  L P + SC +LQ LIL+ N + + 
Sbjct: 247 T-DLHLSQNVIEKLPDGLGELKKLTILKVDQNRLSTLNPNIGSCENLQELILTENFLFEL 305

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P  I   L +L+ L +D N L+ +P++                           +L  L 
Sbjct: 306 PSTI-GKLLNLNNLNVDRNSLQSLPTE-------------------------IGNLKQLG 339

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
            L LR  +L+  P ++ +   L +LD+S N LQ +P    NL +L  + LS+N
Sbjct: 340 VLSLRDNKLQYLPVEVGQCTALHVLDVSGNRLQYLPYSLINL-NLKAVWLSEN 391



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L V+ N+L+ L+ N I S   L ELI ++N L  +P TIG L  L  L++ +N + S+P+
Sbjct: 272 LKVDQNRLSTLNPN-IGSCENLQELILTENFLFELPSTIGKLLNLNNLNVDRNSLQSLPT 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I     L    + +N L  LP E+G+ + L  LD+  N+L+        L L  + LS 
Sbjct: 331 EIGNLKQLGVLSLRDNKLQYLPVEVGQCTALHVLDVSGNRLQYLPYSLINLNLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|312094637|ref|XP_003148090.1| sur-8-PB [Loa loa]
          Length = 380

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 177/386 (45%), Gaps = 60/386 (15%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     LTEL   KN L  +P  IG+L  L +L L +N + S+P +++    L    + +
Sbjct: 31  IRDLVQLTELFLYKNKLAVLPNEIGNLVNLKKLGLSENGLTSLPDTLAALTRLETLDLRH 90

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP  + ++S L TL L  N++     E  +L RL ++DL  N +  LPP IG++ 
Sbjct: 91  NKLCELPPVIYQISSLETLWLRYNRIVSIGSEIGRLKRLKMIDLRENKIRELPPTIGQIK 150

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +L   LL+ N LRT                    +PE             I   + L+  
Sbjct: 151 SLIVCLLSYNHLRT--------------------IPEE------------IGQCSELT-- 176

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             +L L+  +L ++P  +     + +L +  N ++ LP  ++ C  L+  I+  N+++  
Sbjct: 177 --QLDLQHNDLVSLPEAMGNLQNLIRLGIRYNKLRHLPSGMAFCHKLEEFIVESNQLEAL 234

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP----------- 305
           P+ +L SL +L  + L  N L   PS G +       +++ +N IA +P           
Sbjct: 235 PEGMLASLPNLKTINLSRNELTVFPSGGPQQFASCVSINMEHNAIAKIPFGIFSKATGLT 294

Query: 306 ----ENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
               +    +S+P        + EL L   QLR  P D+ +L  L +L LS N L+ +P 
Sbjct: 295 KLNLKENALTSMPLDMGCWLAMTELNLSTNQLRVLPDDVDKLVNLEVLVLSNNMLKKLPS 354

Query: 355 GFKNLTSLTELDLSDNNISALPPELG 380
              +L  L ELDL +N + A+P E+G
Sbjct: 355 QIGSLKKLRELDLEENELDAIPNEIG 380



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 86/162 (53%), Gaps = 5/162 (3%)

Query: 220 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
           E T+LDLS + I  +P  +     L  L L +NK+   P+ I  +L +L  L L  N L 
Sbjct: 13  EETRLDLSSSDIVSIPSSIRDLVQLTELFLYKNKLAVLPNEI-GNLVNLKKLGLSENGLT 71

Query: 280 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
            +P D    +  L+ LDL +N +  LP  P    +  L+ L+LR  ++    ++I RL++
Sbjct: 72  SLP-DTLAALTRLETLDLRHNKLCELP--PVIYQISSLETLWLRYNRIVSIGSEIGRLKR 128

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L+++DL +N ++ +P     + SL    LS N++  +P E+G
Sbjct: 129 LKMIDLRENKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEIG 170


>gi|71981152|ref|NP_001021259.1| Protein SOC-2, isoform a [Caenorhabditis elegans]
 gi|74966395|sp|Q22875.3|SHOC2_CAEEL RecName: Full=Leucine-rich repeat protein soc-2; AltName:
           Full=Suppressor of Clr protein 2; AltName:
           Full=Suppressor of activated let-60 Ras protein 8
 gi|3252977|gb|AAC39129.1| Ras-binding protein SUR-8 [Caenorhabditis elegans]
 gi|3293318|gb|AAC25697.1| leucine-rich repeat protein SOC-2 [Caenorhabditis elegans]
 gi|351065205|emb|CCD61151.1| Protein SOC-2, isoform a [Caenorhabditis elegans]
          Length = 559

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 225/461 (48%), Gaps = 49/461 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKLT L    I     L +L  S+N L  +P+++ SL  L  LDL  N++  
Sbjct: 98  LTELFLYKNKLTCLPTE-IGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTE 156

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------------YC 108
           +PS I    SL   ++  N + A+  ++G LSKL  LD+  N+++E             C
Sbjct: 157 VPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVC 216

Query: 109 -------------VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
                        +  C   L+ LDL +N LS LP  IGK+  L ++ +  N +R + S 
Sbjct: 217 LVSYNHLTRVPEEIGDCH-SLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSE 275

Query: 156 LVNGPTPALLKYLRSR-----LPEN------EDSEASTTKEDLITM---ATRLSVTSKEL 201
           L +     L +++        LP N      +    + ++ +L        +  V++  +
Sbjct: 276 LES--CQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTI 333

Query: 202 SLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           ++E   +S IP  I+ +A  +TKL+L  N +  LP ++ S  S+  L LS N++K  P+ 
Sbjct: 334 NMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPED 393

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 320
           I   L +L  L L NN L+++P+       + ++      + ++P    F  L HL +L+
Sbjct: 394 I-EKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGF--LQHLTKLW 450

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPEL 379
           ++  ++   P  I  L  L+ L L +N+L +IPE   +L SL  L L+DN ++  LP EL
Sbjct: 451 VQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFEL 510

Query: 380 GLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            L + SL+ + ++ +PL  I   I   G   V++YLK + P
Sbjct: 511 ALCQ-SLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGP 550



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 170/364 (46%), Gaps = 39/364 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   T LTEL   KN L  +P  IG L  L +L L +N + S+P S++   SL    + +
Sbjct: 92  IKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRH 151

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+ +P+ + K+  L TL L  N++     +   L +L +LD+  N +  LP  IGK+T
Sbjct: 152 NKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLT 211

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +L   L++ N L                    +R+PE      S T              
Sbjct: 212 SLVVCLVSYNHL--------------------TRVPEEIGDCHSLT-------------- 237

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             +L L+  +LS +P  I +   + ++ +  N I+ +P EL SC  L+  I+  N ++  
Sbjct: 238 --QLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLL 295

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P  +LT L  +  + L  N L   P+ G +       +++ +N I+ +P    FS    L
Sbjct: 296 PPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIG-IFSKATRL 354

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
            +L L+  +L   P D+     +  L+LS N L+ +PE  + L +L  L LS+N +  LP
Sbjct: 355 TKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLP 414

Query: 377 PELG 380
            ++G
Sbjct: 415 NQIG 418



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 105/185 (56%), Gaps = 5/185 (2%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           + L L  + +++IPS I E  ++T+L L +N +  LP E+    +L+ L LS N +   P
Sbjct: 76  QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 135

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
           D+ L SL SL  L L +N L +VPS  +K I  L+ L L YN I ++ E     +L  L+
Sbjct: 136 DS-LASLESLETLDLRHNKLTEVPSVIYK-IGSLETLWLRYNRIVAVDEQ--IGNLSKLK 191

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++RE P+ I +L  L +  +S N L  +PE   +  SLT+LDL  N++S LP 
Sbjct: 192 MLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPY 251

Query: 378 ELGLL 382
            +G L
Sbjct: 252 SIGKL 256



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 1/92 (1%)

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           Q L L  +++   P+ I  L QL  L L +N L  +P     L +L +L LS+N +++LP
Sbjct: 76  QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 135

Query: 377 PELGLLEPSLQALRLDGNPLRSIRRTILDRGT 408
             L  LE SL+ L L  N L  +   I   G+
Sbjct: 136 DSLASLE-SLETLDLRHNKLTEVPSVIYKIGS 166


>gi|424841835|ref|ZP_18266460.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395320033|gb|EJF52954.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 509

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 117/358 (32%), Positives = 175/358 (48%), Gaps = 17/358 (4%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L +L AS+  L  +P  IG    + +L++  NR+  +P S++    L    + +N LS L
Sbjct: 18  LKKLDASRKGLQELPREIGRSKGMKQLNIEDNRLKDLPDSLANLGQLEWLDISDNRLSPL 77

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  L +L KL  LDL +N L E   E A    L  LDL NN L  LP   G++  LRKLL
Sbjct: 78  PKVLFQLRKLNWLDLSNNGLSELGEELAAWEELMRLDLKNNQLQELPNNFGQLKALRKLL 137

Query: 144 LTGNPLRTLRSSL---VNGPTPALLKYLRSRLPENEDS-----EASTTKEDLITMATRLS 195
           L  N L  L +S           L +   ++LPE         + S +   +  +A  L 
Sbjct: 138 LERNQLSALPASFGQLQQLQQLDLSENAFTQLPEEIGQLKALKQLSISANPMPQLAKVLG 197

Query: 196 VTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
             S  +EL  EG+ L  +P EI +   +  L L  N ++ L   L SC++L+ L L  N+
Sbjct: 198 QLSNLEELQAEGLGLEEVPEEIGQLNNLQSLFLGYNRLKSLAANLGSCSALEQLDLGNNR 257

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY-NIASLPENPPFSS 312
           ++  P   L     L  L L++NPL ++P    ++I  L+ LD+S  N+ +L       S
Sbjct: 258 LEKLP-LNLARCQQLKVLNLEDNPLGELPL-FLQEIQALEELDMSNCNLVNLGAG---LS 312

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
           LP L  L L   QLR+ P++  +L  L  LDL  N LQ  P+  + L+ + +L L+ N
Sbjct: 313 LPALHWLDLSANQLRDLPSNFGQLTALSWLDLRDNQLQKWPKALEELSQIRQLLLAGN 370



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 194/412 (47%), Gaps = 30/412 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N L+ L   L A+W  L  L    N L  +P   G L  L +L L +N++ +
Sbjct: 87  LNWLDLSNNGLSELGEEL-AAWEELMRLDLKNNQLQELPNNFGQLKALRKLLLERNQLSA 145

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+S      L +  +  NA + LP E+G+L  L  L + +N + +      QL  L  L
Sbjct: 146 LPASFGQLQQLQQLDLSENAFTQLPEEIGQLKALKQLSISANPMPQLAKVLGQLSNLEEL 205

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
                 L  +P EIG++  L+ L L  N L++L ++L +      L    +RL +   + 
Sbjct: 206 QAEGLGLEEVPEEIGQLNNLQSLFLGYNRLKSLAANLGSCSALEQLDLGNNRLEKLPLNL 265

Query: 180 ASTTKEDLITMAT----RLSVTSKEL-SLEGMNLS-----------AIPSEIWEAGEITK 223
           A   +  ++ +       L +  +E+ +LE +++S           ++P+  W       
Sbjct: 266 ARCQQLKVLNLEDNPLGELPLFLQEIQALEELDMSNCNLVNLGAGLSLPALHW------- 318

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           LDLS N +++LP       +L  L L  N+++ WP A L  LS +  L L  N LRQ+  
Sbjct: 319 LDLSANQLRDLPSNFGQLTALSWLDLRDNQLQKWPKA-LEELSQIRQLLLAGNFLRQINL 377

Query: 284 DGFKDIPMLQILDLSYNIASLPE-NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 342
               D P L+ LDLS N   L E +  +  LP L++L L + QL + P D   L  L  L
Sbjct: 378 SEL-DWPELEELDLSKN--ELTELSGQWDKLPQLRQLNLEKNQLAQLPEDWQPLSNLEEL 434

Query: 343 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           DLS N L S+P+    L  +  LDL +N  +  P  L  L   LQAL L  N
Sbjct: 435 DLSDNQLDSLPQSLGKLDQIQWLDLRNNQFTEFPQALLPLVGQLQALYLSEN 486



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 161/332 (48%), Gaps = 21/332 (6%)

Query: 70  SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 128
           SL +       L  LP E+G+   +  L++  N+LK+       L +L  LD+S+N LS 
Sbjct: 17  SLKKLDASRKGLQELPREIGRSKGMKQLNIEDNRLKDLPDSLANLGQLEWLDISDNRLSP 76

Query: 129 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 188
           LP  + ++  L  L L+ N L  L   L      A  + +R  L  N+  E       L 
Sbjct: 77  LPKVLFQLRKLNWLDLSNNGLSELGEELA-----AWEELMRLDLKNNQLQELPNNFGQLK 131

Query: 189 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 248
            +        ++L LE   LSA+P+   +  ++ +LDLS N+  +LP E+    +L+ L 
Sbjct: 132 AL--------RKLLLERNQLSALPASFGQLQQLQQLDLSENAFTQLPEEIGQLKALKQLS 183

Query: 249 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN 307
           +S N +      +L  LS+L  L+ +   L +VP +    +  LQ L L YN + SL  N
Sbjct: 184 ISANPMPQLA-KVLGQLSNLEELQAEGLGLEEVPEE-IGQLNNLQSLFLGYNRLKSLAAN 241

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
               S   L++L L   +L + P ++ R QQL++L+L  N L  +P   + + +L ELD+
Sbjct: 242 --LGSCSALEQLDLGNNRLEKLPLNLARCQQLKVLNLEDNPLGELPLFLQEIQALEELDM 299

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           S+ N+  L   L L  P+L  L L  N LR +
Sbjct: 300 SNCNLVNLGAGLSL--PALHWLDLSANQLRDL 329



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 103/184 (55%), Gaps = 6/184 (3%)

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
           + KLD SR  +QELP E+     ++ L +  N++KD PD+ L +L  L  L + +N L  
Sbjct: 18  LKKLDASRKGLQELPREIGRSKGMKQLNIEDNRLKDLPDS-LANLGQLEWLDISDNRLSP 76

Query: 281 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
           +P   F+ +  L  LDLS N ++ L E    ++   L  L L+  QL+E P +  +L+ L
Sbjct: 77  LPKVLFQ-LRKLNWLDLSNNGLSELGEE--LAAWEELMRLDLKNNQLQELPNNFGQLKAL 133

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           R L L +N L ++P  F  L  L +LDLS+N  + LP E+G L+ +L+ L +  NP+  +
Sbjct: 134 RKLLLERNQLSALPASFGQLQQLQQLDLSENAFTQLPEEIGQLK-ALKQLSISANPMPQL 192

Query: 400 RRTI 403
            + +
Sbjct: 193 AKVL 196


>gi|421094569|ref|ZP_15555285.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362631|gb|EKP13668.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
          Length = 379

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 169/362 (46%), Gaps = 64/362 (17%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P+ IG L  L  L+L++N++ ++P+ I    +L    +  N  +ALP ++GKL  L
Sbjct: 54  LTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQFTALPNDIGKLKNL 113

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L L  NQL  +  +  QL+ L  L LS N L+ LP +IGK+  L +L L  N L+TL 
Sbjct: 114 QELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGKLQKLERLSLIENQLKTLS 173

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
             +          YL+                        L V    L L G  L+ +P 
Sbjct: 174 KEI---------GYLKE-----------------------LQV----LDLNGNQLTTLPK 197

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           EI E   + +L L +N ++ LP ++    +LQ L +  N++K  P  I   L +L  L L
Sbjct: 198 EIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEI-GELQNLQELYL 256

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
             N L+ +P +   ++  L +LDL  N                        +L+  P +I
Sbjct: 257 YTNQLKTLPKE-IGELQNLTVLDLHIN------------------------ELKTLPKEI 291

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
             LQ L +LDL  N L+++P+    L SLT LDL +N +  LP E+G L+  L+ L LD 
Sbjct: 292 GELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKLK-ELRKLHLDD 350

Query: 394 NP 395
            P
Sbjct: 351 IP 352



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/284 (34%), Positives = 137/284 (48%), Gaps = 20/284 (7%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++  N+LT L N  I     L  L   KN    +P  IG L  L  L L  N++ + P+
Sbjct: 70  LNLYRNQLTTLPNE-IGKLQNLQLLNLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPN 128

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E ++  N L+ LP ++GKL KL  L L  NQLK    E   L+ L VLDL+
Sbjct: 129 DIGQLQNLRELHLSVNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLN 188

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++  LR+L L  N L+TL + +        LK L+             
Sbjct: 189 GNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDI------GELKNLQV---------LHI 233

Query: 183 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
               L T+   +      +EL L    L  +P EI E   +T LDL  N ++ LP E+  
Sbjct: 234 GSNQLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPKEIGE 293

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
             +L  L L  N++K  P  I   L SL+ L L NN L+ +P++
Sbjct: 294 LQNLTVLDLRNNELKTLPKEI-GELQSLTVLDLRNNELKTLPNE 336



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 160/326 (49%), Gaps = 43/326 (13%)

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN-NSLSGLPPEIG 134
           + N  L+ LP E+G+L  L  L+L+ NQL     E  +L+   L   + N  + LP +IG
Sbjct: 49  LSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQFTALPNDIG 108

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
           K+  L++L L+ N L T  + +        L+ LR                         
Sbjct: 109 KLKNLQELHLSFNQLTTFPNDI------GQLQNLR------------------------- 137

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
                EL L    L+ +P++I +  ++ +L L  N ++ L  E+     LQ L L+ N++
Sbjct: 138 -----ELHLSVNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQL 192

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 313
              P  I   L +L  L L  N L+ +P+D   ++  LQ+L +  N + +LP+      L
Sbjct: 193 TTLPKEI-GELKNLRELHLYKNQLKTLPND-IGELKNLQVLHIGSNQLKTLPK--EIGEL 248

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
            +LQELYL   QL+  P +I  LQ L +LDL  N L+++P+    L +LT LDL +N + 
Sbjct: 249 QNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELK 308

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSI 399
            LP E+G L+ SL  L L  N L+++
Sbjct: 309 TLPKEIGELQ-SLTVLDLRNNELKTL 333


>gi|427737941|ref|YP_007057485.1| hypothetical protein Riv7116_4517 [Rivularia sp. PCC 7116]
 gi|427372982|gb|AFY56938.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 868

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 105/304 (34%), Positives = 147/304 (48%), Gaps = 41/304 (13%)

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LDLS N L+ LPPEIG++T L+ L L+ N L                    S LPE    
Sbjct: 21  LDLSGNELTALPPEIGQLTNLQYLHLSYNQL--------------------SSLPEE--- 57

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                        T L      L L    LS +P+EI +  ++  L L RN +  LP E+
Sbjct: 58  ---------FGQLTNLQF----LYLLENQLSTLPAEIGQLRKLQCLYLRRNQLSILPEEI 104

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
               +LQ+L L+ N++   P A    L  L C  L  N L  +P +    +  LQ L L+
Sbjct: 105 GQLTNLQSLYLNENQLSTLP-AEFGQLRKLQCFYLRRNQLSSLPEE-IGQLTNLQSLYLN 162

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N +++LP  P    L +LQ L+L   QL   P +I +L  L+ L LS N L S+PE   
Sbjct: 163 ENQLSTLP--PEIGQLSNLQYLHLSYNQLSSLPPEIGQLSNLQYLHLSYNQLSSLPEEIG 220

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
            LT+L  L L  N +S+LPPE+G L   L  L LDGNPL S+   I  + ++ +L + K 
Sbjct: 221 QLTNLQSLYLRYNQLSSLPPEIGRLHSHLTELTLDGNPLESLPAEIRGKISQVILNFYKQ 280

Query: 418 KIPE 421
           K+ +
Sbjct: 281 KLEQ 284



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/284 (34%), Positives = 134/284 (47%), Gaps = 38/284 (13%)

Query: 2   SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 61
           ++LD+ GN+LT L    I   T L  L  S N L+ +PE  G L+ L  L L +N++ ++
Sbjct: 19  TELDLSGNELTALPPE-IGQLTNLQYLHLSYNQLSSLPEEFGQLTNLQFLYLLENQLSTL 77

Query: 62  PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 120
           P+ I     L   Y+  N LS LP E+G+L+ L +L L+ NQL     E  QLR L    
Sbjct: 78  PAEIGQLRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQLSTLPAEFGQLRKLQCFY 137

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           L  N LS LP EIG++T L+ L L  N L TL       P            PE      
Sbjct: 138 LRRNQLSSLPEEIGQLTNLQSLYLNENQLSTL-------P------------PE------ 172

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                  I   + L      L L    LS++P EI +   +  L LS N +  LP E+  
Sbjct: 173 -------IGQLSNLQY----LHLSYNQLSSLPPEIGQLSNLQYLHLSYNQLSSLPEEIGQ 221

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
             +LQ+L L  N++   P  I    S L+ L LD NPL  +P++
Sbjct: 222 LTNLQSLYLRYNQLSSLPPEIGRLHSHLTELTLDGNPLESLPAE 265



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           +N L+ +PE IG L+ L  L L++N++ ++P  I    +L   ++  N LS+LP E+G+L
Sbjct: 140 RNQLSSLPEEIGQLTNLQSLYLNENQLSTLPPEIGQLSNLQYLHLSYNQLSSLPPEIGQL 199

Query: 92  SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT-LRKLLLTGNPL 149
           S L  L L  NQL     E  QL  L  L L  N LS LPPEIG++ + L +L L GNPL
Sbjct: 200 SNLQYLHLSYNQLSSLPEEIGQLTNLQSLYLRYNQLSSLPPEIGRLHSHLTELTLDGNPL 259

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPE 174
            +L + +    +  +L + + +L +
Sbjct: 260 ESLPAEIRGKISQVILNFYKQKLEQ 284



 Score = 45.8 bits (107), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 44/79 (55%), Gaps = 1/79 (1%)

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           EL L   +L   P +I +L  L+ L LS N L S+PE F  LT+L  L L +N +S LP 
Sbjct: 20  ELDLSGNELTALPPEIGQLTNLQYLHLSYNQLSSLPEEFGQLTNLQFLYLLENQLSTLPA 79

Query: 378 ELGLLEPSLQALRLDGNPL 396
           E+G L   LQ L L  N L
Sbjct: 80  EIGQLR-KLQCLYLRRNQL 97



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 3/90 (3%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS-LAEFYMG 77
           I   + L  L  S N L+ +PE IG L+ L  L L  N++ S+P  I    S L E  + 
Sbjct: 196 IGQLSNLQYLHLSYNQLSSLPEEIGQLTNLQSLYLRYNQLSSLPPEIGRLHSHLTELTLD 255

Query: 78  NNALSALPAEL-GKLSKLGTLDLHSNQLKE 106
            N L +LPAE+ GK+S++  L+ +  +L++
Sbjct: 256 GNPLESLPAEIRGKISQV-ILNFYKQKLEQ 284



 Score = 38.1 bits (87), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 7/50 (14%)

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           Q+  EG+      TELDLS N ++ALPPE+G L  +LQ L L  N L S+
Sbjct: 12  QAAAEGW------TELDLSGNELTALPPEIGQL-TNLQYLHLSYNQLSSL 54


>gi|418678197|ref|ZP_13239471.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418686545|ref|ZP_13247711.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|418740868|ref|ZP_13297244.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|400321387|gb|EJO69247.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410738978|gb|EKQ83710.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410751463|gb|EKR08440.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 400

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 171/369 (46%), Gaps = 48/369 (13%)

Query: 39  PETIGSLSRLIR-------LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           P+T   L+  I+       LDL Q ++ ++P  I    +L E Y+  N L  LP E+G+L
Sbjct: 32  PKTYMDLTEAIQNPLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQL 91

Query: 92  SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
             L  L+L  NQLK    E  QL+ L  L LS N L  LP EI ++  L++L L  N L 
Sbjct: 92  QNLRVLELIHNQLKTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLT 151

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
           TL + +        LK L+                               L L    L  
Sbjct: 152 TLPTEI------GQLKNLQR------------------------------LHLWNNQLMT 175

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +P EI +   +  L+LS N I+ +P E+     LQ+L L  N++   P+ I   L  L  
Sbjct: 176 LPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEI-GQLQKLQE 234

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 330
           L L  N L  +P++    +  LQ L L  N  ++  N     L +LQ LYLR  +L    
Sbjct: 235 LSLSTNRLTTLPNE-IGQLQNLQDLYLGSNQLTILPNE-IGQLKNLQTLYLRSNRLTTLS 292

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            DI +LQ L+ LDL  N L + P+  + L +L  LDL  N ++ LP E+G L+ +LQ   
Sbjct: 293 KDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLK-NLQVFE 351

Query: 391 LDGNPLRSI 399
           L+ N L ++
Sbjct: 352 LNNNQLTTL 360



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 179/396 (45%), Gaps = 65/396 (16%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+   KL  L    I     L EL  S N L  +P+ IG L  L  L+L  N++ ++P 
Sbjct: 51  LDLSQQKLKTLPKE-IGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPE 109

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L   Y+  N L  LP E+ +L  L  L L  NQL     E  QL+ L  L L 
Sbjct: 110 EIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLW 169

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN L  LP EIG++  L+ L L+ N ++T+   +        L+ L+S            
Sbjct: 170 NNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEK------LQKLQS------------ 211

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                             L L    L+A+P+EI +  ++ +L LS N +  LP E+    
Sbjct: 212 ------------------LGLGNNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQ 253

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           +LQ L L  N++   P+ I   L +L  L L +N L  +     KDI  LQ         
Sbjct: 254 NLQDLYLGSNQLTILPNEI-GQLKNLQTLYLRSNRLTTLS----KDIEQLQ--------- 299

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
                       +L+ L L   QL   P +I +L+ L++LDL  N L ++P+    L +L
Sbjct: 300 ------------NLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNL 347

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
              +L++N ++ LP E+G L+ +LQ L L  N L S
Sbjct: 348 QVFELNNNQLTTLPNEIGQLQ-NLQELYLIDNQLSS 382



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 122/279 (43%), Gaps = 39/279 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+LT L    I     L  L    N L  +PE IG L  L  L+L  N+I +
Sbjct: 140 LQELYLRDNQLTTLPTE-IGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKT 198

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           IP  I     L    +GNN L+ALP E+G+L KL  L L +N+L     E  QL+ L  L
Sbjct: 199 IPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDL 258

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +N L+ LP EIG++  L+ L L  N L TL   +                       
Sbjct: 259 YLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDI----------------------- 295

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        K L L    L+  P EI +   +  LDL  N +  LP E+ 
Sbjct: 296 -----EQLQNL--------KSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIG 342

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
              +LQ   L+ N++   P+ I   L +L  L L +N L
Sbjct: 343 QLKNLQVFELNNNQLTTLPNEI-GQLQNLQELYLIDNQL 380


>gi|428181670|gb|EKX50533.1| hypothetical protein GUITHDRAFT_66876, partial [Guillardia theta
           CCMP2712]
          Length = 526

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 196/413 (47%), Gaps = 57/413 (13%)

Query: 7   EGNKLTVLSNNL------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           E N++ + +NN+      I++   L+ L    N L  +PE IG+ ++L  L L +NR+  
Sbjct: 38  ELNQIRLYNNNIKEIPSSISNLQKLSVLWIQNNELEDLPEEIGNCTQLSVLSLSENRLTK 97

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY------CVEACQL 114
           +P S+  C  L E  + +N L   P  +  L  L  +D+  N + +       C E   L
Sbjct: 98  LPYSLGQCTMLRELMIDHNELQVPPDWIRNLQALTYMDVSHNSINKLPAEIGACTELHHL 157

Query: 115 RLSV--------------------LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 154
            +S                     LD+SNN L  LP ++GK+T L  LL   N +  L  
Sbjct: 158 NVSFNSNKISKLPQELGLLADMTELDVSNNRLQALPSDLGKLTNLNILLDGNNLIVVLED 217

Query: 155 SLVNGPTPALLKYLRSRLPENEDSEASTTKE--DLITMATRLSVTSKELSLEGMNLSAIP 212
           S+      ++L  LR       D   +  +E    I   T L    + L L    +  +P
Sbjct: 218 SI------SMLSSLRKL-----DLSFNMLRELPPEIIFLTNL----EGLYLVNNRIKTLP 262

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
            +I    ++ +++LS N ++ +P  +    +LQ+L++  N +   P+ I   L+SL+ + 
Sbjct: 263 GDIGNLLKMVEVNLSENELEYIPETVGKMEALQSLVIEENALNYLPNQI-NGLTSLTKIS 321

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYN---IASLPENPPFSSLPHLQELYLRRMQLREA 329
           L NN L  +P++ F    + ++ +L ++   ++S+PE    S L  L  L+L + Q+R+ 
Sbjct: 322 LANNALDMLPAESFAIGYLYKLTELRFSNNQLSSIPE--IISQLTTLDILHLAKNQIRKL 379

Query: 330 PTDILRLQQLRILDLS--QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           P ++  L  LR LDLS   N LQ IP G  N   L +L L+DN ++ LPP +G
Sbjct: 380 PYELGVLSSLRELDLSLAGNMLQMIPSGIGNFQGLKKLFLNDNQLAILPPSVG 432



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 186/389 (47%), Gaps = 19/389 (4%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  I  L+ L  L LH N I  IP+ I     L +  + NN +  +P+ +  L KL
Sbjct: 3   LTEIPADIFELTELKVLWLHDNNISEIPTEIGNLQELNQIRLYNNNIKEIPSSISNLQKL 62

Query: 95  GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L + +N+L++   E     +LSVL LS N L+ LP  +G+ T LR+L++  N L+   
Sbjct: 63  SVLWIQNNELEDLPEEIGNCTQLSVLSLSENRLTKLPYSLGQCTMLRELMIDHNELQV-- 120

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
                   P  ++ L++    +    +       I   T L   +  +S     +S +P 
Sbjct: 121 -------PPDWIRNLQALTYMDVSHNSINKLPAEIGACTELHHLN--VSFNSNKISKLPQ 171

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           E+    ++T+LD+S N +Q LP +L    +L  L+   N I    D+I + LSSL  L L
Sbjct: 172 ELGLLADMTELDVSNNRLQALPSDLGKLTNLNILLDGNNLIVVLEDSI-SMLSSLRKLDL 230

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
             N LR++P +      +  +  ++  I +LP +    +L  + E+ L   +L   P  +
Sbjct: 231 SFNMLRELPPEIIFLTNLEGLYLVNNRIKTLPGD--IGNLLKMVEVNLSENELEYIPETV 288

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE---LGLLEPSLQALR 390
            +++ L+ L + +N+L  +P     LTSLT++ L++N +  LP E   +G L   L  LR
Sbjct: 289 GKMEALQSLVIEENALNYLPNQINGLTSLTKISLANNALDMLPAESFAIGYLY-KLTELR 347

Query: 391 LDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
              N L SI   I    T  +L   K++I
Sbjct: 348 FSNNQLSSIPEIISQLTTLDILHLAKNQI 376



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 201/406 (49%), Gaps = 36/406 (8%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLD--LHQNRILSIPSSISGCCSLAEFYM 76
           I +   LT +  S N +N +P  IG+ + L  L+   + N+I  +P  +     + E  +
Sbjct: 125 IRNLQALTYMDVSHNSINKLPAEIGACTELHHLNVSFNSNKISKLPQELGLLADMTELDV 184

Query: 77  GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIG 134
            NN L ALP++LGKL+ L  L L  N L     ++  +   L  LDLS N L  LPPEI 
Sbjct: 185 SNNRLQALPSDLGKLTNLNIL-LDGNNLIVVLEDSISMLSSLRKLDLSFNMLRELPPEII 243

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            +T L  L L  N ++TL   + N     LLK +   L ENE      T   +  + + +
Sbjct: 244 FLTNLEGLYLVNNRIKTLPGDIGN-----LLKMVEVNLSENELEYIPETVGKMEALQSLV 298

Query: 195 --------------SVTS-KELSLEGMNLSAIPSEIWEAG---EITKLDLSRNSIQELPP 236
                          +TS  ++SL    L  +P+E +  G   ++T+L  S N +  +P 
Sbjct: 299 IEENALNYLPNQINGLTSLTKISLANNALDMLPAESFAIGYLYKLTELRFSNNQLSSIPE 358

Query: 237 ELSSCASLQTLILSRNKIKDWPD--AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
            +S   +L  L L++N+I+  P    +L+SL  L  L L  N L+ +PS G  +   L+ 
Sbjct: 359 IISQLTTLDILHLAKNQIRKLPYELGVLSSLRELD-LSLAGNMLQMIPS-GIGNFQGLKK 416

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           L L+ N +A LP  P    L  L+EL L   +L   P  + +L+ L+ +++S N L+ + 
Sbjct: 417 LFLNDNQLAILP--PSVGDLLELEELQLFNNELIALPERLGQLRNLKQMNMSNNKLRVVL 474

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
               NL++L +L+LS N +  LP E+G +E  L  L L+ N L+S+
Sbjct: 475 PAIGNLSNLEKLNLSHNLLQGLPREIGQIE-KLLFLSLEHNELQSL 519



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 95/180 (52%), Gaps = 7/180 (3%)

Query: 206 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 265
           M L+ IP++I+E  E+  L L  N+I E+P E+ +   L  + L  N IK+ P +I ++L
Sbjct: 1   MGLTEIPADIFELTELKVLWLHDNNISEIPTEIGNLQELNQIRLYNNNIKEIPSSI-SNL 59

Query: 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 324
             LS L + NN L  +P +   +   L +L LS N +  LP +        L+EL +   
Sbjct: 60  QKLSVLWIQNNELEDLPEE-IGNCTQLSVLSLSENRLTKLPYS--LGQCTMLRELMIDHN 116

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS--DNNISALPPELGLL 382
           +L+  P  I  LQ L  +D+S NS+  +P      T L  L++S   N IS LP ELGLL
Sbjct: 117 ELQVPPDWIRNLQALTYMDVSHNSINKLPAEIGACTELHHLNVSFNSNKISKLPQELGLL 176



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 156/352 (44%), Gaps = 41/352 (11%)

Query: 6   VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
           ++GN L V+  + I+  + L +L  S N+L  +P  I  L+ L  L L  NRI ++P  I
Sbjct: 206 LDGNNLIVVLEDSISMLSSLRKLDLSFNMLRELPPEIIFLTNLEGLYLVNNRIKTLPGDI 265

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 124
                + E  +  N L  +P  +GK+  L +L +  N L     +   L  L+ + L+NN
Sbjct: 266 GNLLKMVEVNLSENELEYIPETVGKMEALQSLVIEENALNYLPNQINGLTSLTKISLANN 325

Query: 125 SLSGLPPE---IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
           +L  LP E   IG +  L +L  + N L ++   +    T  +L   ++++         
Sbjct: 326 ALDMLPAESFAIGYLYKLTELRFSNNQLSSIPEIISQLTTLDILHLAKNQI--------- 376

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
             ++    +    S+   +LSL G  L  IPS I     + KL L+ N +  LPP +   
Sbjct: 377 --RKLPYELGVLSSLRELDLSLAGNMLQMIPSGIGNFQGLKKLFLNDNQLAILPPSVGDL 434

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
             L+ L L  N++   P+  L  L +L  + + NN LR V                    
Sbjct: 435 LELEELQLFNNELIALPER-LGQLRNLKQMNMSNNKLRVVL------------------- 474

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
                 P   +L +L++L L    L+  P +I ++++L  L L  N LQS+P
Sbjct: 475 ------PAIGNLSNLEKLNLSHNLLQGLPREIGQIEKLLFLSLEHNELQSLP 520



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 1/80 (1%)

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
           M L E P DI  L +L++L L  N++  IP    NL  L ++ L +NNI  +P  +  L+
Sbjct: 1   MGLTEIPADIFELTELKVLWLHDNNISEIPTEIGNLQELNQIRLYNNNIKEIPSSISNLQ 60

Query: 384 PSLQALRLDGNPLRSIRRTI 403
             L  L +  N L  +   I
Sbjct: 61  -KLSVLWIQNNELEDLPEEI 79



 Score = 42.0 bits (97), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 44/82 (53%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +PE +G L  L ++++  N++  +  +I    +L +  + +N L  LP E+G++ 
Sbjct: 445 NELIALPERLGQLRNLKQMNMSNNKLRVVLPAIGNLSNLEKLNLSHNLLQGLPREIGQIE 504

Query: 93  KLGTLDLHSNQLKEYCVEACQL 114
           KL  L L  N+L+   V+   L
Sbjct: 505 KLLFLSLEHNELQSLPVQLGHL 526


>gi|322783661|gb|EFZ10999.1| hypothetical protein SINV_03864 [Solenopsis invicta]
          Length = 621

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 204/416 (49%), Gaps = 33/416 (7%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T L  L  S N L  +P  +G L ++ R+    N +   P  ISGC +L   ++ NN + 
Sbjct: 222 TTLKTLDISFNHLEIIP-PLGELRKVERIMFQSNNLQEFPD-ISGCSALTVLHLDNNNIP 279

Query: 83  AL-----PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 136
                  P  L  +  L  L L  N+++    E  +L  L VLDLS+N+++ +P  IG +
Sbjct: 280 VCVNEIDPQRLEAIGHLKKLTLQGNKIELIPEEIVKLINLEVLDLSHNNITLIPFCIGIL 339

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL-------IT 189
             L++ ++ GN +  +R  ++   TP +L ++R  +  N    +  T+E L       I 
Sbjct: 340 PNLKQFVIEGNNITNVRGDIIRCGTPRILTHIRQIVDNNT---SVITRELLQPCGGNNIY 396

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAG---EITKLDLSRNSIQELPPELSSCASLQT 246
               +   +K  SL G NL  I  EI E      +T +DLSRN + ELP ++S+  ++  
Sbjct: 397 PDKYVMKHTKLFSLTGQNLVEISEEILEDAANASVTIIDLSRNKLSELPDKMSTIVTVTD 456

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 306
           L L+ N +   P+ I      L  L L  N L+ +PS     +  L+ +DLS+N  S  E
Sbjct: 457 LKLTSNHLASLPEWIGEKYKFLQILDLSTNHLQSLPS-SISCLKYLRDIDLSFN--SSIE 513

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF-KNLTSLTEL 365
           +   + L H +       +  E P  I  ++ L  L ++ N +  I     + L  L  L
Sbjct: 514 SESITCLKHEE-------KFTELPEAIYDVESLESLIINDNLISKIDVPLLEKLKRLAVL 566

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
           +L +NNIS +PPELG L+ +L+ L L GN  +  R+ IL + T+ +L YL++ IP+
Sbjct: 567 NLMNNNISHVPPELGNLK-NLRNLLLSGNCFKYPRQAILMKDTEEILSYLRNLIPQ 621



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 187/411 (45%), Gaps = 49/411 (11%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           + NLL  +P  IGSL RL  ++L  N++ S+P        L E Y+ NN LS L  E+G 
Sbjct: 118 NNNLLEKLPAEIGSLRRLRIINLSDNKLKSLPYEFYTLEELCELYLKNNLLSILEPEIGN 177

Query: 91  LSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  +DL  N L E  +     +RL  L+L +N +  LPP++   TTL+ L ++ N L
Sbjct: 178 LIMLTHMDLSYNNLSELPIGMGYMVRLETLNLCHNMIKELPPDV---TTLKTLDISFNHL 234

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
             +       P   L K  R     N   E        I+  + L+V    L L+  N+ 
Sbjct: 235 EII------PPLGELRKVERIMFQSNNLQEFPD-----ISGCSALTV----LHLDNNNIP 279

Query: 210 AIPSEI----WEA-GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 264
              +EI     EA G + KL L  N I+ +P E+    +L+ L LS N I   P  I   
Sbjct: 280 VCVNEIDPQRLEAIGHLKKLTLQGNKIELIPEEIVKLINLEVLDLSHNNITLIPFCI-GI 338

Query: 265 LSSLSCLKLDNNPLRQVPSDGFK-DIPML-----QILDLSYNIASLPENPPFSS------ 312
           L +L    ++ N +  V  D  +   P +     QI+D + ++ +     P         
Sbjct: 339 LPNLKQFVIEGNNITNVRGDIIRCGTPRILTHIRQIVDNNTSVITRELLQPCGGNNIYPD 398

Query: 313 ---LPHLQELYLRRMQLREAPTDILRL---QQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
              + H +   L    L E   +IL       + I+DLS+N L  +P+    + ++T+L 
Sbjct: 399 KYVMKHTKLFSLTGQNLVEISEEILEDAANASVTIIDLSRNKLSELPDKMSTIVTVTDLK 458

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           L+ N++++LP  +G     LQ L L  N L+S+  +I      + LKYL+D
Sbjct: 459 LTSNHLASLPEWIGEKYKFLQILDLSTNHLQSLPSSI------SCLKYLRD 503



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 157/349 (44%), Gaps = 59/349 (16%)

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N+L+ +  ++  L++L TLD+  N L       C  + +   L+NN L  LP EIG +  
Sbjct: 84  NSLTLIDEKVQFLTELSTLDVRINHL------YCDFKSA---LNNNLLEKLPAEIGSLRR 134

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           LR + L+ N L++L                              T E+L           
Sbjct: 135 LRIINLSDNKLKSLPYEFY-------------------------TLEELC---------- 159

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
            EL L+   LS +  EI     +T +DLS N++ ELP  +     L+TL L  N IK+ P
Sbjct: 160 -ELYLKNNLLSILEPEIGNLIMLTHMDLSYNNLSELPIGMGYMVRLETLNLCHNMIKELP 218

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 318
             + T    L  L +  N L  +P  G     + ++  + +   +L E P  S    L  
Sbjct: 219 PDVTT----LKTLDISFNHLEIIPPLG----ELRKVERIMFQSNNLQEFPDISGCSALTV 270

Query: 319 LYLRRMQLREAPTDI--LRLQ---QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
           L+L    +     +I   RL+    L+ L L  N ++ IPE    L +L  LDLS NNI+
Sbjct: 271 LHLDNNNIPVCVNEIDPQRLEAIGHLKKLTLQGNKIELIPEEIVKLINLEVLDLSHNNIT 330

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
            +P  +G+L P+L+   ++GN + ++R  I+  GT  +L +++  +  N
Sbjct: 331 LIPFCIGIL-PNLKQFVIEGNNITNVRGDIIRCGTPRILTHIRQIVDNN 378



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 141/322 (43%), Gaps = 45/322 (13%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N L  + E +  L+ L  LD+  N +          C      + NN L  LPAE+G 
Sbjct: 82  SFNSLTLIDEKVQFLTELSTLDVRINHLY---------CDFKS-ALNNNLLEKLPAEIGS 131

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L +L  ++L  N+LK    E   L  L  L L NN LS L PEIG +  L  + L+ N L
Sbjct: 132 LRRLRIINLSDNKLKSLPYEFYTLEELCELYLKNNLLSILEPEIGNLIMLTHMDLSYNNL 191

Query: 150 RTL---RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
             L      +V   T  L   +   LP            D+ T+ T        L +   
Sbjct: 192 SELPIGMGYMVRLETLNLCHNMIKELP-----------PDVTTLKT--------LDISFN 232

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI----L 262
           +L  IP  + E  ++ ++    N++QE  P++S C++L  L L  N I    + I    L
Sbjct: 233 HLEIIPP-LGELRKVERIMFQSNNLQEF-PDISGCSALTVLHLDNNNIPVCVNEIDPQRL 290

Query: 263 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPF--SSLPHLQELY 320
            ++  L  L L  N +  +P +  K I  L++LDLS+N  +L    PF    LP+L++  
Sbjct: 291 EAIGHLKKLTLQGNKIELIPEEIVKLIN-LEVLDLSHNNITL---IPFCIGILPNLKQFV 346

Query: 321 LRRMQLREAPTDILRLQQLRIL 342
           +    +     DI+R    RIL
Sbjct: 347 IEGNNITNVRGDIIRCGTPRIL 368



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 103/192 (53%), Gaps = 19/192 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR-LDLHQNRIL 59
           ++ +D+  NKL+ L + + ++   +T+L  + N L  +PE IG   + ++ LDL  N + 
Sbjct: 431 VTIIDLSRNKLSELPDKM-STIVTVTDLKLTSNHLASLPEWIGEKYKFLQILDLSTNHLQ 489

Query: 60  SIPSSISGCCSLAEFYMGNNA---------------LSALPAELGKLSKLGTLDLHSNQL 104
           S+PSSIS    L +  +  N+                + LP  +  +  L +L ++ N +
Sbjct: 490 SLPSSISCLKYLRDIDLSFNSSIESESITCLKHEEKFTELPEAIYDVESLESLIINDNLI 549

Query: 105 KEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 162
            +  V   +   RL+VL+L NN++S +PPE+G +  LR LLL+GN  +  R +++   T 
Sbjct: 550 SKIDVPLLEKLKRLAVLNLMNNNISHVPPELGNLKNLRNLLLSGNCFKYPRQAILMKDTE 609

Query: 163 ALLKYLRSRLPE 174
            +L YLR+ +P+
Sbjct: 610 EILSYLRNLIPQ 621



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 105/230 (45%), Gaps = 27/230 (11%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-----LSSCA 242
           +   + L      L ++  ++S +P +IW   E+T+ +L RN   E   E          
Sbjct: 17  VIFKSDLRCIQHNLEVDSFSIS-VPDKIWSINELTEEEL-RNLHVEFDYEPLEERWWEQE 74

Query: 243 SLQTLILSRNKIK--DWPDAILTSLSSLSCL----------KLDNNPLRQVPSDGFKDIP 290
            LQ L LS N +   D     LT LS+L              L+NN L ++P++    + 
Sbjct: 75  PLQVLDLSFNSLTLIDEKVQFLTELSTLDVRINHLYCDFKSALNNNLLEKLPAE-IGSLR 133

Query: 291 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
            L+I++LS N + SLP    F +L  L ELYL+   L     +I  L  L  +DLS N+L
Sbjct: 134 RLRIINLSDNKLKSLPYE--FYTLEELCELYLKNNLLSILEPEIGNLIMLTHMDLSYNNL 191

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
             +P G   +  L  L+L  N I  LPP++     +L+ L +  N L  I
Sbjct: 192 SELPIGMGYMVRLETLNLCHNMIKELPPDVT----TLKTLDISFNHLEII 237


>gi|40788390|dbj|BAA74885.2| KIAA0862 protein [Homo sapiens]
          Length = 584

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 194/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 127 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 185

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 186 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITL 245

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 246 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 284

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  S+ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 285 --------------LSSLSR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 329

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 330 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 389

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 390 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 447

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 448 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 492



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 104 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 163

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 164 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLS 220

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 221 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 280

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 281 TIGNLS-SLSRLGLRYNRLSAIPRSL 305



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 362 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 421

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 422 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 481

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 482 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 511



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 149/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 245 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPR 303

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 304 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 363

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 364 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 423

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 424 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 470

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 471 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 525

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 526 ----LNDNPNLHSLP 536


>gi|332212811|ref|XP_003255512.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Nomascus
           leucogenys]
 gi|441600055|ref|XP_004087585.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Nomascus
           leucogenys]
          Length = 582

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 194/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  S+ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 283 --------------LSSLSR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPRSL 303



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 149/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534


>gi|168269502|dbj|BAG09878.1| leucine-rich repeat protein SHOC-2 [synthetic construct]
          Length = 582

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 194/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  S+ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 283 --------------LSSLSR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPRSL 303



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 149/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534


>gi|421129287|ref|ZP_15589488.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359483|gb|EKP06581.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 448

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 190/419 (45%), Gaps = 65/419 (15%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G+KL  LS   I     L +L  + N L  +P  IG L  L  LDL+ N +  +P 
Sbjct: 53  LNLSGSKLATLSKE-IGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPK 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL------------------- 104
            I    +L    +G N L+ LP E+G+L  L  L+L  N+L                   
Sbjct: 112 EIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLN 171

Query: 105 -KEYCV---EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 159
             +  +   +  QL+ L +L+   N L+  P EIG++  L++L L  N L TLR  +V  
Sbjct: 172 LNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQL 231

Query: 160 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 219
               +L  +         S   TT    I    +L    +EL+L G+ L  +P  I +  
Sbjct: 232 QNLQILDLI---------SNPLTTLPKEIGQLQKL----QELNLYGIQLKTLPQGIIQLQ 278

Query: 220 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
            +  L+L+   +  LP E+   + LQ L L  N++   P+ I   L  L  L L NNPLR
Sbjct: 279 NLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEI-GQLKKLQELYLGNNPLR 337

Query: 280 QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
            +P    K+I  LQ                      LQ LYL   Q+   P +I +L+ L
Sbjct: 338 TLP----KEIEQLQ---------------------KLQTLYLEGNQITTFPKEIGQLKNL 372

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           + L+L  N L ++P+    L +L EL+L  N ++ LP E+G L+  L+ L L  NP+ S
Sbjct: 373 QELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQ-KLRKLNLYNNPIAS 430



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 178/369 (48%), Gaps = 25/369 (6%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L+L  +++ ++   I    +L + Y+  N L+ LP E+G+L  L  LDL+SN+L     E
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL---VNGPTPALLK 166
             +L+ L VL+L  N L+ LP E+G++  L+ L L  N L  L   +    N     L  
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNL 172

Query: 167 YLRSRLPE-----------NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 215
              + LPE           N      TT    I    +L    +EL+L    L+ +  E+
Sbjct: 173 NKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKL----QELNLGFNRLTTLREEV 228

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
            +   +  LDL  N +  LP E+     LQ L L   ++K  P  I+  L +L  L L+ 
Sbjct: 229 VQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGII-QLQNLRGLNLNY 287

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
             L  +P +    +  LQ L L  N + +LPE      L  LQELYL    LR  P +I 
Sbjct: 288 THLTILPKE-IGQLSKLQKLYLYGNQLTTLPE--EIGQLKKLQELYLGNNPLRTLPKEIE 344

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           +LQ+L+ L L  N + + P+    L +L EL+L  N ++ LP E+G L+ +LQ L L+ N
Sbjct: 345 QLQKLQTLYLEGNQITTFPKEIGQLKNLQELNLGFNQLTTLPQEIGQLQ-NLQELNLEFN 403

Query: 395 PLRSIRRTI 403
            L ++ + +
Sbjct: 404 QLATLPKEV 412



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 23/168 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL + GN+LT L    I     L EL    N L  +P+ I  L +L  L L  N+I +
Sbjct: 303 LQKLYLYGNQLTTLPEE-IGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITT 361

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
            P  I    +L E  +G N L+ LP E+G+L  L  L+L  NQ                 
Sbjct: 362 FPKEIGQLKNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQ----------------- 404

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
                L+ LP E+G++  LRKL L  NP+ + +   +    P  + Y 
Sbjct: 405 -----LATLPKEVGQLQKLRKLNLYNNPIASEKIERIRKLLPKCIIYF 447


>gi|41281398|ref|NP_031399.2| leucine-rich repeat protein SHOC-2 isoform 1 [Homo sapiens]
 gi|114632804|ref|XP_521602.2| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Pan
           troglodytes]
 gi|149689670|ref|XP_001496623.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Equus caballus]
 gi|194042023|ref|XP_001927528.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Sus scrofa]
 gi|296221216|ref|XP_002756642.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Callithrix
           jacchus]
 gi|332835019|ref|XP_003312812.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Pan troglodytes]
 gi|395828086|ref|XP_003787217.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Otolemur garnettii]
 gi|397510493|ref|XP_003825630.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Pan
           paniscus]
 gi|397510495|ref|XP_003825631.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Pan
           paniscus]
 gi|426366199|ref|XP_004050149.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Gorilla gorilla
           gorilla]
 gi|14423936|sp|Q9UQ13.2|SHOC2_HUMAN RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|166977684|sp|Q5RAV5.2|SHOC2_PONAB RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|3252979|gb|AAC39856.1| Ras-binding protein SUR-8 [Homo sapiens]
 gi|3293320|gb|AAC25698.1| leucine-rich repeat protein SHOC-2 [Homo sapiens]
 gi|29792199|gb|AAH50445.1| Soc-2 suppressor of clear homolog (C. elegans) [Homo sapiens]
 gi|119569933|gb|EAW49548.1| soc-2 suppressor of clear homolog (C. elegans), isoform CRA_a [Homo
           sapiens]
 gi|410217418|gb|JAA05928.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410217420|gb|JAA05929.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410267376|gb|JAA21654.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410302564|gb|JAA29882.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410333721|gb|JAA35807.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|417402990|gb|JAA48322.1| Putative leucine-rich repeat protein shoc-2 [Desmodus rotundus]
 gi|431895441|gb|ELK04957.1| Leucine-rich repeat protein SHOC-2 [Pteropus alecto]
          Length = 582

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 194/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  S+ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 283 --------------LSSLSR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPRSL 303



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 149/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534


>gi|156120535|ref|NP_001095413.1| leucine-rich repeat protein SHOC-2 [Bos taurus]
 gi|426253112|ref|XP_004020244.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Ovis
           aries]
 gi|166977671|sp|A6QLV3.1|SHOC2_BOVIN RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|151553933|gb|AAI48098.1| SHOC2 protein [Bos taurus]
 gi|296472607|tpg|DAA14722.1| TPA: leucine-rich repeat protein SHOC-2 [Bos taurus]
 gi|440906851|gb|ELR57068.1| Leucine-rich repeat protein SHOC-2 [Bos grunniens mutus]
          Length = 582

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 194/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  S+ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 283 --------------LSSLSR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPRSL 303



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 149/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534


>gi|158259127|dbj|BAF85522.1| unnamed protein product [Homo sapiens]
          Length = 582

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 194/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  S+ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 283 --------------LSSLSR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQELVLTNNQLTTLPRGI 490



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPRSL 303



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQELVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 149/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQELVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534


>gi|384491504|gb|EIE82700.1| hypothetical protein RO3G_07405 [Rhizopus delemar RA 99-880]
          Length = 456

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 213/452 (47%), Gaps = 74/452 (16%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           KLD+  NK+  L + +I     + EL  S+N L+ +     +L  L+RLD   N++  I 
Sbjct: 42  KLDLSHNKIKTLPD-IILHAGKIKELQVSQNQLDILFRGDVTLPSLVRLDASDNQLTRIT 100

Query: 63  SSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVL 119
           +  S    L E  + NN ++    + LG    + TLD+ SN+LK+  + A    + L  L
Sbjct: 101 TGSSDFPKLIEVALRNNRMTEAGMKGLGGAPNIQTLDISSNKLKDIPLTAIIHLIHLQRL 160

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+  N +  +P E+G++  L+ +   GNP+R   S  ++    +L    +S+  +  + E
Sbjct: 161 DVRANDIQQIPYELGQLEELKAIHCEGNPMRITTS--MDHFIESLRAKYKSQKEQAANEE 218

Query: 180 ASTT----------------------KEDLITMATRLSVTSK---ELSLEGMNLS--AIP 212
              T                      KE  + +  R  +++K   ELS E +N +  AIP
Sbjct: 219 QDNTAIRSENASKEDEKEEENDNIQIKEQQVDVVKRFDMSNKQLMELSEEQLNFTGEAIP 278

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCAS-LQTLILSRNKIKDWP---DAILTSLSSL 268
             I          LSRN   +LP  LS  A  +  L L  N+I+++    D ++   SSL
Sbjct: 279 GTIL---------LSRNMFTQLPMALSELAKFIVHLDLEHNRIEEFNLTIDGLV--FSSL 327

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 328
             LKL NN ++Q+ + G                         +S P L+EL L +  L  
Sbjct: 328 KVLKLSNNRMKQLKAIG-----------------------ESTSFPKLEELVLNQNMLTS 364

Query: 329 APTDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
            P ++   L +L+IL +S N + +I  G      L  L+LS+N+I  LPPEL L+E  L+
Sbjct: 365 LPHNLASILPELKILSVSSNKVDNITIGMFG-KKLEILNLSNNDIGQLPPELSLIE-GLK 422

Query: 388 ALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
            L + GN  R  R  I+D+GT+A+L++L+ ++
Sbjct: 423 ELVVFGNRFRIPRPAIVDQGTQAILEFLRHRV 454



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 34/192 (17%)

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
           N SA+ S       + KLDLS N I+ LP  +     ++ L +S+N++       +T L 
Sbjct: 33  NASAVKS-------LVKLDLSHNKIKTLPDIILHAGKIKELQVSQNQLDILFRGDVT-LP 84

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
           SL  L   +N L ++ + G  D P L  + L  N  +          P++Q L +   +L
Sbjct: 85  SLVRLDASDNQLTRITT-GSSDFPKLIEVALRNNRMTEAGMKGLGGAPNIQTLDISSNKL 143

Query: 327 REAP-TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           ++ P T I+ L  L+ LD+  N +Q I                       P ELG LE  
Sbjct: 144 KDIPLTAIIHLIHLQRLDVRANDIQQI-----------------------PYELGQLE-E 179

Query: 386 LQALRLDGNPLR 397
           L+A+  +GNP+R
Sbjct: 180 LKAIHCEGNPMR 191


>gi|124004060|ref|ZP_01688907.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123990639|gb|EAY30119.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 577

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 183/403 (45%), Gaps = 27/403 (6%)

Query: 2   SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 61
           S +D  G  L+V+ +  I     L  L  S N L  +PE+ G L  L  LDL   ++ + 
Sbjct: 68  SSIDASGQGLSVVPDG-IGKLNNLGGLDLSHNQLTTLPESFGKLVNLEYLDLSGAQLTTF 126

Query: 62  PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 120
           P S S   +L   Y+ +  L   P   GKL  L  L L S QL        +L  L  L 
Sbjct: 127 PESFSELVNLERLYLSSTQLVTFPESFGKLVNLQHLYLSSTQLITLPKSFDKLVNLERLY 186

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS---LVNGPTPALLKYLRSRLPENED 177
           LSN  L  LP    K+  L  L L+G  L TL  S   LVN      L+YL         
Sbjct: 187 LSNTQLITLPESFDKLVNLEYLDLSGTQLTTLPESFDKLVN------LEYLDL------- 233

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
             + T   DL      L V  ++L L    L+ +P    E   + +L LS   + +LP  
Sbjct: 234 --SGTQLTDLPESFGEL-VNLQDLYLSDTQLTDLPESFGELVNLQRLYLSNTQLTDLPES 290

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
                +LQ L LS  ++ D P++    L +L  L L +  L  +P + F ++  LQ L L
Sbjct: 291 FGELVNLQDLYLSNTQLTDLPESF-DKLVNLQRLNLSSTQLTALP-ESFGELVNLQRLYL 348

Query: 298 S-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
           S   + +LPE+  F  L +LQ+LYL  +QL   P    +L  L+ L LS   L ++PE F
Sbjct: 349 SNTQLTALPES--FDKLVNLQDLYLSNIQLTALPESFDKLVNLQHLYLSDTQLTALPESF 406

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
             L +L  L LSD  ++ALP   G L  +LQ L L    L ++
Sbjct: 407 DKLVNLQHLYLSDTQLTALPESFGEL-VNLQHLNLSSTQLTAL 448



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 173/394 (43%), Gaps = 21/394 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+ G +LT    +  +    L  L  S   L   PE+ G L  L  L L   ++++
Sbjct: 113 LEYLDLSGAQLTTFPES-FSELVNLERLYLSSTQLVTFPESFGKLVNLQHLYLSSTQLIT 171

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S     +L   Y+ N  L  LP    KL  L  LDL   QL        +L  L  L
Sbjct: 172 LPKSFDKLVNLERLYLSNTQLITLPESFDKLVNLEYLDLSGTQLTTLPESFDKLVNLEYL 231

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS---LVNGPTPALLKYLRSRLPENE 176
           DLS   L+ LP   G++  L+ L L+   L  L  S   LVN     L     + LPE+ 
Sbjct: 232 DLSGTQLTDLPESFGELVNLQDLYLSDTQLTDLPESFGELVNLQRLYLSNTQLTDLPESF 291

Query: 177 DSEASTTKEDLITMATRLS---------VTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
               +   +DL    T+L+         V  + L+L    L+A+P    E   + +L LS
Sbjct: 292 GELVNL--QDLYLSNTQLTDLPESFDKLVNLQRLNLSSTQLTALPESFGELVNLQRLYLS 349

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
              +  LP       +LQ L LS  ++   P++    L +L  L L +  L  +P + F 
Sbjct: 350 NTQLTALPESFDKLVNLQDLYLSNIQLTALPESF-DKLVNLQHLYLSDTQLTALP-ESFD 407

Query: 288 DIPMLQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
            +  LQ L LS   + +LPE+  F  L +LQ L L   QL   P     L  L+ L+LS 
Sbjct: 408 KLVNLQHLYLSDTQLTALPES--FGELVNLQHLNLSSTQLTALPESFGELVNLQHLNLSS 465

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
             L ++PE F  L +L  LDLS+  ++ LP   G
Sbjct: 466 TQLTTLPESFGELVNLQNLDLSNTQLTTLPKSFG 499



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 179/408 (43%), Gaps = 52/408 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+ G +LT L  +       L  L  S   L  +PE+ G L  L  L L   ++  
Sbjct: 205 LEYLDLSGTQLTTLPES-FDKLVNLEYLDLSGTQLTDLPESFGELVNLQDLYLSDTQLTD 263

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S     +L   Y+ N  L+ LP   G+L  L  L L + QL +      +L  L  L
Sbjct: 264 LPESFGELVNLQRLYLSNTQLTDLPESFGELVNLQDLYLSNTQLTDLPESFDKLVNLQRL 323

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +LS+  L+ LP   G++  L++L L+   L                    + LPE+ D  
Sbjct: 324 NLSSTQLTALPESFGELVNLQRLYLSNTQL--------------------TALPESFDK- 362

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                           V  ++L L  + L+A+P    +   +  L LS   +  LP    
Sbjct: 363 ---------------LVNLQDLYLSNIQLTALPESFDKLVNLQHLYLSDTQLTALPESFD 407

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS- 298
              +LQ L LS  ++   P++    L +L  L L +  L  +P + F ++  LQ L+LS 
Sbjct: 408 KLVNLQHLYLSDTQLTALPESF-GELVNLQHLNLSSTQLTALP-ESFGELVNLQHLNLSS 465

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
             + +LPE+  F  L +LQ L L   QL   P     L  L+ LDLS     ++PE F  
Sbjct: 466 TQLTTLPES--FGELVNLQNLDLSNTQLTTLPKSFGELVNLQNLDLSNTQFTTLPESFDE 523

Query: 359 LTSLTELDLSDNNISALPPELGLLEP---SLQALRLDGNPL--RSIRR 401
           L +L  LDLS+N + +L     L E     LQ L+L+GNPL    I+R
Sbjct: 524 LVNLKTLDLSNNQLRSL----NLCEKFVSRLQELQLEGNPLAESEIKR 567


>gi|383872300|ref|NP_001244517.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
 gi|355783099|gb|EHH65020.1| hypothetical protein EGM_18359 [Macaca fascicularis]
 gi|380784083|gb|AFE63917.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
 gi|383421817|gb|AFH34122.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
 gi|384943642|gb|AFI35426.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
          Length = 582

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 194/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  S+ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 283 --------------LSSLSR-LGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPRSL 303



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 149/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S+S C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534


>gi|428177838|gb|EKX46716.1| hypothetical protein GUITHDRAFT_107493 [Guillardia theta CCMP2712]
          Length = 644

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 130/383 (33%), Positives = 196/383 (51%), Gaps = 22/383 (5%)

Query: 22  WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNA 80
           WT  +  ++S+++ N    T   LS L  L L+ N + S+P+ I  G  SL   ++ NN 
Sbjct: 34  WTCYSLSLSSRDIRNITNGTFDGLSSLFSLYLYNNNLQSLPAGIFDGLSSLQWLHLYNNN 93

Query: 81  LSALPAEL-GKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEI-GKM 136
           L +LPA +   LS L  L L++N L+     +      L  L L+ NSL  LP  I   +
Sbjct: 94  LQSLPAGIFDGLSSLQWLHLYNNNLQSLPAGIFDGLSSLQELYLAFNSLQSLPAGIFDGL 153

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           ++L+ L L  N L++L + + +G     L  L+     N + ++         +  RLS 
Sbjct: 154 SSLQGLHLHNNNLQSLPAGIFDG-----LSSLQELHLYNNNLQSLPAG-----IFDRLS- 202

Query: 197 TSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKI 254
           + + L L   NL ++P+ I++    + +LDL+ NS+Q LP  +    +SL+ L L  N +
Sbjct: 203 SLQGLHLHNNNLQSLPAGIFDGLSSLQRLDLASNSLQSLPAGIFDGLSSLKWLDLHNNNL 262

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL-SYNIASLPENPPFSSL 313
           +  P  I   LSSL  L L +N L+ +P+  F  +  LQ LDL + N+ SLP    F  L
Sbjct: 263 QSLPAGIFDGLSSLQELDLASNSLQSLPAGIFDRLSSLQGLDLYNNNLQSLPAG-IFDRL 321

Query: 314 PHLQELYLRRMQLREAPTDIL-RLQQLRILDLSQNSLQSIPEG-FKNLTSLTELDLSDNN 371
             LQ L L +  L+  P  I   L  L+ LDL+ NSLQS+P G F  L+SL +L L D N
Sbjct: 322 SSLQGLILYKNSLQSLPAGIFDGLSSLQWLDLASNSLQSLPAGIFDGLSSLHDLYLEDMN 381

Query: 372 ISALPPELGLLEPSLQALRLDGN 394
           + +LP  +     SLQ L LD N
Sbjct: 382 LQSLPAGIFDGLSSLQLLYLDIN 404



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 138/427 (32%), Positives = 200/427 (46%), Gaps = 42/427 (9%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSI-S 66
           N L  L   +    + L  L    N L  +P  I   LS L  L L+ N + S+P+ I  
Sbjct: 68  NNLQSLPAGIFDGLSSLQWLHLYNNNLQSLPAGIFDGLSSLQWLHLYNNNLQSLPAGIFD 127

Query: 67  GCCSLAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSN 123
           G  SL E Y+  N+L +LPA +   LS L  L LH+N L+     +      L  L L N
Sbjct: 128 GLSSLQELYLAFNSLQSLPAGIFDGLSSLQGLHLHNNNLQSLPAGIFDGLSSLQELHLYN 187

Query: 124 NSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           N+L  LP  I  ++++L+ L L  N L++L + + +G    L    R  L  N       
Sbjct: 188 NNLQSLPAGIFDRLSSLQGLHLHNNNLQSLPAGIFDG----LSSLQRLDLASNSLQSLPA 243

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL-SS 240
              D ++       + K L L   NL ++P+ I++    + +LDL+ NS+Q LP  +   
Sbjct: 244 GIFDGLS-------SLKWLDLHNNNLQSLPAGIFDGLSSLQELDLASNSLQSLPAGIFDR 296

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
            +SLQ L L  N ++  P  I   LSSL  L L  N L+ +P+  F  +  LQ LDL+ N
Sbjct: 297 LSSLQGLDLYNNNLQSLPAGIFDRLSSLQGLILYKNSLQSLPAGIFDGLSSLQWLDLASN 356

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL-RLQQLRILDLSQNSL--------- 349
            + SLP    F  L  L +LYL  M L+  P  I   L  L++L L  N++         
Sbjct: 357 SLQSLPAGI-FDGLSSLHDLYLEDMNLQSLPAGIFDGLSSLQLLYLDINNIGVVPYDRLM 415

Query: 350 ----------QSIPEG-FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
                      S+P G F  L+SL ELDL+ N++ +LP  +     SLQ L L  N L+S
Sbjct: 416 SLSYLGLRKVDSLPAGIFDGLSSLQELDLASNSLQSLPAGIFDGLSSLQGLDLASNSLQS 475

Query: 399 IRRTILD 405
           +   I D
Sbjct: 476 LPAGIFD 482



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 142/427 (33%), Positives = 206/427 (48%), Gaps = 44/427 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRIL 59
           +  L +  N L  L   +    + L EL  + N L  +P  I   LS L  L LH N + 
Sbjct: 108 LQWLHLYNNNLQSLPAGIFDGLSSLQELYLAFNSLQSLPAGIFDGLSSLQGLHLHNNNLQ 167

Query: 60  SIPSSI-SGCCSLAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKEY--CVEACQLR 115
           S+P+ I  G  SL E ++ NN L +LPA +  +LS L  L LH+N L+     +      
Sbjct: 168 SLPAGIFDGLSSLQELHLYNNNLQSLPAGIFDRLSSLQGLHLHNNNLQSLPAGIFDGLSS 227

Query: 116 LSVLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           L  LDL++NSL  LP  I   +++L+ L L  N L++L + + +G          S L E
Sbjct: 228 LQRLDLASNSLQSLPAGIFDGLSSLKWLDLHNNNLQSLPAGIFDG---------LSSLQE 278

Query: 175 NEDSEASTTKEDL-ITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQ 232
            +   AS + + L   +  RLS + + L L   NL ++P+ I++    +  L L +NS+Q
Sbjct: 279 LD--LASNSLQSLPAGIFDRLS-SLQGLDLYNNNLQSLPAGIFDRLSSLQGLILYKNSLQ 335

Query: 233 ELPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 291
            LP  +    +SLQ L L+ N ++  P  I   LSSL  L L++  L+ +P+  F  +  
Sbjct: 336 SLPAGIFDGLSSLQWLDLASNSLQSLPAGIFDGLSSLHDLYLEDMNLQSLPAGIFDGLSS 395

Query: 292 LQILDLSYN--------------------IASLPENPPFSSLPHLQELYLRRMQLREAPT 331
           LQ+L L  N                    + SLP    F  L  LQEL L    L+  P 
Sbjct: 396 LQLLYLDINNIGVVPYDRLMSLSYLGLRKVDSLPAGI-FDGLSSLQELDLASNSLQSLPA 454

Query: 332 DIL-RLQQLRILDLSQNSLQSIPEG-FKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
            I   L  L+ LDL+ NSLQS+P G F  L+SL  LDL ++NIS +  +      SL  L
Sbjct: 455 GIFDGLSSLQGLDLASNSLQSLPAGIFDGLSSLQWLDLHNDNISCIFSQAFTNLSSLYYL 514

Query: 390 RLDGNPL 396
            L GN L
Sbjct: 515 DLTGNNL 521


>gi|122937315|ref|NP_001073929.1| leucine-rich repeat and IQ domain-containing protein 4 [Homo
           sapiens]
 gi|187661973|sp|A6NIV6.2|LRIQ4_HUMAN RecName: Full=Leucine-rich repeat and IQ domain-containing protein
           4; AltName: Full=Leucine-rich repeat-containing protein
           64
          Length = 560

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 179/415 (43%), Gaps = 62/415 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN L  L    I + T L E+   +N     P+ +  L  L  +DL +N+I +IP 
Sbjct: 147 LGLTGNHLKCLPKE-IVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPE 205

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L +FYM +N L  LPA L + S+L  LDL  N L        +LR ++ + LS
Sbjct: 206 EIGHLTGLQKFYMASNNLPVLPASLCQCSQLSVLDLSHNLLHSIPKSFAELRKMTEIGLS 265

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L  +P  I + T+L  L L    L  LR S                           
Sbjct: 266 GNRLEKVPRLICRWTSLHLLYLGNTGLHRLRGSF-------------------------- 299

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                     R  V  + L L   +L   P +I     +  L L  N I +LP EL S +
Sbjct: 300 ----------RCLVNLRFLDLSQNHLHHCPLQICALKNLEVLGLDDNKIGQLPSELGSLS 349

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
            L+ L L+ N+   +P+ +L SL+SL  L +  +        GFK         L+Y   
Sbjct: 350 KLKILGLTGNEFLSFPEEVL-SLASLEKLYIGQD-------QGFK---------LTY--- 389

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
            +PE+     L  L+ELY+    L   P  +  +  L +LD   N L+ +P+      +L
Sbjct: 390 -VPEH--IRKLQSLKELYIENNHLEYLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQAL 446

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
            EL L DN ++ LP  L  L  +L+ L L  NP+    + +   G +A+ KYLK+
Sbjct: 447 KELRLEDNLLTHLPENLDSL-VNLKVLTLMDNPMEEPPKEVCAEGNEAIWKYLKE 500



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 27/220 (12%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA------- 260
           L+AIP EI+   E+ ++ L  N I+E+P E+    +++ L L +N ++    A       
Sbjct: 37  LTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPALGLLSSL 96

Query: 261 ----------------ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 303
                           +++ L +L  L+L    L+++P   FK++  L++L L+ N +  
Sbjct: 97  ESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVIFKNLHHLELLGLTGNHLKC 156

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
           LP+     +   L+E+YL+R Q    P ++  L  L I+DL +N + +IPE   +LT L 
Sbjct: 157 LPKE--IVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEEIGHLTGLQ 214

Query: 364 ELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           +  ++ NN+  LP  L      L  L L  N L SI ++ 
Sbjct: 215 KFYMASNNLPVLPASLCQCS-QLSVLDLSHNLLHSIPKSF 253


>gi|332214711|ref|XP_003256479.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Nomascus leucogenys]
          Length = 560

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 184/414 (44%), Gaps = 60/414 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN L  L    I + T L E+   +N     P+ +  L  L  +DL +N+I +IP 
Sbjct: 147 LGLTGNHLKCLPKE-IVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPE 205

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I     L +FYM +N L  LPA L + S+L                      SVLDLS+
Sbjct: 206 EIGHLTGLQKFYMASNNLPVLPASLCQCSQL----------------------SVLDLSH 243

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N L  +P  + K+  + ++ L+GN L  +   L+ G T   L YL              T
Sbjct: 244 NLLRSIPKSLAKLRKMTEIGLSGNRLEKV-PRLICGWTSLHLLYL------------GNT 290

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
               +  + R  V  + L L   +L   P +I     +  L L  N I +LP EL S + 
Sbjct: 291 GLHRLRGSFRCLVNLRCLDLSQNHLDHCPMQICALKNLEVLGLDDNRIGQLPSELGSLSK 350

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 303
           L+ L L+ N+   +P+ +L SL+SL  L +  +        GFK         L+Y    
Sbjct: 351 LKILGLTGNEFLSFPEEVL-SLASLEKLYIGQD-------QGFK---------LTY---- 389

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
           +PE+     L  L+ELY+    L   P  +  +  L +LD   N L+ +P+      +L 
Sbjct: 390 VPEH--IRKLQSLKELYIENNHLEYLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQALK 447

Query: 364 ELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           EL L DN ++ LP  L  L  +L+ L L  NP+    + +   G +A+ KYLK+
Sbjct: 448 ELRLEDNLLTHLPENLDSL-VNLKVLTLMDNPMEEPPKEVCAEGNEAIWKYLKE 500



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 48/212 (22%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA------- 260
           L+AIP EI+   E+ ++ L  N I+E+P E+    +++ L L +N ++    A       
Sbjct: 37  LTAIPLEIFTFTELEEVHLENNQIEEIPKEIQHLKNIRVLYLDKNNLRSLCPALGLLSSL 96

Query: 261 ----------------ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL 304
                           +++ L +L  L+L    L+++P    K++  L++L L+ N    
Sbjct: 97  ESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVICKNLHHLELLGLTGN---- 152

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
                                L+  P +I+   +LR + L +N  +  P+    L +L  
Sbjct: 153 --------------------HLKCLPKEIVNQTKLREIYLKRNQFEVFPQELCVLYTLEI 192

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           +DL +N I A+P E+G L   LQ   +  N L
Sbjct: 193 IDLDENKIGAIPEEIGHL-TGLQKFYMASNNL 223


>gi|390347474|ref|XP_798409.3| PREDICTED: leucine-rich repeat protein SHOC-2-like
           [Strongylocentrotus purpuratus]
          Length = 550

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 187/405 (46%), Gaps = 45/405 (11%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P ++  L++L+ L L+ NR++S+PS I   C+L    +  N+L+ LP EL KL  L  L
Sbjct: 76  LPSSLKDLTQLVELYLYGNRLVSLPSEIGCLCNLERLALNENSLTTLPEELEKLGLLKVL 135

Query: 98  DLHSNQLKEYCVEACQL------------------------RLSVLDLSNNSLSGLPPEI 133
           DL  N+LKE      +L                        +L++L L  N +  LP  +
Sbjct: 136 DLRHNKLKEIPEVVYKLLSLTTLFLRFNRITQVGEDIHNLTKLTMLSLRENKIKALPRGV 195

Query: 134 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 193
           GK+T L    ++ N L  L   + N    + L      L  NE  +   T  +L  ++  
Sbjct: 196 GKLTLLTTFDVSHNHLEHLPEEIGNCTQLSSLD-----LQHNELLDLPETTGNLKCLS-- 248

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRN 252
                  L L    L+ IP  +     + + ++  N+I  LP   L S   L ++ LSRN
Sbjct: 249 ------RLGLRYNRLTGIPKSLSNCVNLEEFNVEGNNIGILPEGLLCSLNKLTSICLSRN 302

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
               +P       +++  + +D+N + ++P   F     L  L++  N + +LP +   +
Sbjct: 303 NFTAYPVGGPQQFATVDTINMDHNQINKIPFGIFSRSKYLTKLNMKDNQLTALPLD--VN 360

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           S   + EL L   Q+ + P DI  L  L +L LS N L+ +P    NL+ L ELDL +N 
Sbjct: 361 SWTSMVELNLGTNQISKLPEDIEHLTSLEVLILSNNLLRRLPTRIGNLSRLRELDLEENR 420

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
           + ALP EL  L+  LQ L +  N L  + R+I   G  + L YLK
Sbjct: 421 LEALPSELAYLK-ELQKLSVQTNQLTQLPRSI---GRLSNLVYLK 461



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 206/417 (49%), Gaps = 27/417 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  NKL  +   ++     LT L    N +  + E I +L++L  L L +N+I ++P 
Sbjct: 135 LDLRHNKLKEIPE-VVYKLLSLTTLFLRFNRITQVGEDIHNLTKLTMLSLRENKIKALPR 193

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +     L  F + +N L  LP E+G  ++L +LDL  N+L +       L+ LS L L 
Sbjct: 194 GVGKLTLLTTFDVSHNHLEHLPEEIGNCTQLSSLDLQHNELLDLPETTGNLKCLSRLGLR 253

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL---VNGPTPALLKYLRSRLPENEDSE 179
            N L+G+P  +     L +  + GN +  L   L   +N  T   L    SR   N  + 
Sbjct: 254 YNRLTGIPKSLSNCVNLEEFNVEGNNIGILPEGLLCSLNKLTSICL----SR--NNFTAY 307

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPEL 238
                +   T+ T        ++++   ++ IP  I+   + +TKL++  N +  LP ++
Sbjct: 308 PVGGPQQFATVDT--------INMDHNQINKIPFGIFSRSKYLTKLNMKDNQLTALPLDV 359

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +S  S+  L L  N+I   P+ I   L+SL  L L NN LR++P+    ++  L+ LDL 
Sbjct: 360 NSWTSMVELNLGTNQISKLPEDI-EHLTSLEVLILSNNLLRRLPTR-IGNLSRLRELDLE 417

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + +LP     + L  LQ+L ++  QL + P  I RL  L  L   +N+L S+PE   
Sbjct: 418 ENRLEALPSE--LAYLKELQKLSVQTNQLTQLPRSIGRLSNLVYLKAGENNLASLPEEIG 475

Query: 358 NLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           +L  L +L ++DN N++ LP EL L   SLQ + ++  PL  I + ++  G   V++
Sbjct: 476 SLEQLQQLYINDNLNLNHLPFELALCS-SLQIMSIENCPLSQIPQEVVAGGPSLVIQ 531



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 158/363 (43%), Gaps = 53/363 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++  DV  N L  L    I + T L+ L    N L  +PET G+L  L RL L  NR+  
Sbjct: 201 LTTFDVSHNHLEHLPEE-IGNCTQLSSLDLQHNELLDLPETTGNLKCLSRLGLRYNRLTG 259

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV- 118
           IP S+S C +L EF +  N +  LP   L  L+KL ++ L  N    Y V   Q   +V 
Sbjct: 260 IPKSLSNCVNLEEFNVEGNNIGILPEGLLCSLNKLTSICLSRNNFTAYPVGGPQQFATVD 319

Query: 119 -LDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR----SRL 172
            +++ +N ++ +P  I  +   L KL +  N L  L    VN  T  +   L     S+L
Sbjct: 320 TINMDHNQINKIPFGIFSRSKYLTKLNMKDNQLTALPLD-VNSWTSMVELNLGTNQISKL 378

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
           P  ED E  T+ E LI              L    L  +P+ I     + +LDL  N ++
Sbjct: 379 P--EDIEHLTSLEVLI--------------LSNNLLRRLPTRIGNLSRLRELDLEENRLE 422

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            LP EL+    LQ L +  N++   P +I   LS+L  LK   N                
Sbjct: 423 ALPSELAYLKELQKLSVQTNQLTQLPRSI-GRLSNLVYLKAGEN---------------- 465

Query: 293 QILDLSYNIASLPENPPFSSLPHLQELYLR-RMQLREAPTDILRLQQLRILDLSQNSLQS 351
                  N+ASLPE     SL  LQ+LY+   + L   P ++     L+I+ +    L  
Sbjct: 466 -------NLASLPEE--IGSLEQLQQLYINDNLNLNHLPFELALCSSLQIMSIENCPLSQ 516

Query: 352 IPE 354
           IP+
Sbjct: 517 IPQ 519



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 6/206 (2%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           + L L  M+++ +PS + +  ++ +L L  N +  LP E+    +L+ L L+ N +   P
Sbjct: 64  RRLDLSKMSITILPSSLKDLTQLVELYLYGNRLVSLPSEIGCLCNLERLALNENSLTTLP 123

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
           +  L  L  L  L L +N L+++P   +K +  L  L L +N I  + E+    +L  L 
Sbjct: 124 EE-LEKLGLLKVLDLRHNKLKEIPEVVYKLLS-LTTLFLRFNRITQVGED--IHNLTKLT 179

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L LR  +++  P  + +L  L   D+S N L+ +PE   N T L+ LDL  N +  LP 
Sbjct: 180 MLSLRENKIKALPRGVGKLTLLTTFDVSHNHLEHLPEEIGNCTQLSSLDLQHNELLDLPE 239

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
             G L+  L  L L  N L  I +++
Sbjct: 240 TTGNLK-CLSRLGLRYNRLTGIPKSL 264



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 3/161 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M +L++  N+++ L  + I   T L  LI S NLL  +P  IG+LSRL  LDL +NR+ +
Sbjct: 365 MVELNLGTNQISKLPED-IEHLTSLEVLILSNNLLRRLPTRIGNLSRLRELDLEENRLEA 423

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +PS ++    L +  +  N L+ LP  +G+LS L  L    N L     E   L +L  L
Sbjct: 424 LPSELAYLKELQKLSVQTNQLTQLPRSIGRLSNLVYLKAGENNLASLPEEIGSLEQLQQL 483

Query: 120 DLSNN-SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 159
            +++N +L+ LP E+   ++L+ + +   PL  +   +V G
Sbjct: 484 YINDNLNLNHLPFELALCSSLQIMSIENCPLSQIPQEVVAG 524



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 1/82 (1%)

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           R LDLS+ S+  +P   K+LT L EL L  N + +LP E+G L  +L+ L L+ N L ++
Sbjct: 64  RRLDLSKMSITILPSSLKDLTQLVELYLYGNRLVSLPSEIGCL-CNLERLALNENSLTTL 122

Query: 400 RRTILDRGTKAVLKYLKDKIPE 421
              +   G   VL    +K+ E
Sbjct: 123 PEELEKLGLLKVLDLRHNKLKE 144


>gi|405968548|gb|EKC33612.1| hypothetical protein CGI_10017764 [Crassostrea gigas]
          Length = 799

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 184/379 (48%), Gaps = 30/379 (7%)

Query: 40  ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 99
           E I  L+  I+     NR+  +P SI+   +L    + NN LSA P  + ++ KL  L +
Sbjct: 62  EEISQLA--IKFTAENNRLKRLPKSIAALENLEHIDITNNTLSAFPGSVSRMKKLEVLII 119

Query: 100 HSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            +N +K+    +  C   L  L  SNN +  LP  IGK  ++  + ++ N +R+++  L 
Sbjct: 120 KNNAIKKLPPAIHKCT-GLQKLYASNNKIRALPKSIGK-ASISYMDVSSNMIRSIKKGLY 177

Query: 158 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 217
                         L +N  +E  T          + ++    L+  G+ L  IP  I +
Sbjct: 178 EMTAEV-------DLSDNRITEMPT------AAVKKPNIQKINLARNGVTL--IPENIDK 222

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              +T LDLS N++QE+P ++     L  L LS N IK  P+ I     +L  L + +N 
Sbjct: 223 LSRLTWLDLSHNAVQEIPAQIGGVRFLHYLNLSHNHIKTLPEEICNLGYALDHLDISHNE 282

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
           +  +P DG K +  L   D+S N +  LPE+     LP L  L + + +L      +  L
Sbjct: 283 IPVLP-DGMKSLRKLTYFDVSNNEVEYLPES--IRELPCLTTLGVSQNKLMSMKFAVY-L 338

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           +QL  L LS+NS++ IPE   ++ SL  LDLS N I  LP  +G ++ SL++L + GN L
Sbjct: 339 KQLEHLYLSRNSIEVIPEEIDHMKSLVTLDLSWNKIKELPSSIGNVK-SLKSLNVCGNKL 397

Query: 397 RSIRRTILDRGTKAVLKYL 415
            +I  ++   G   VL +L
Sbjct: 398 SAIPDSL---GHGQVLTFL 413



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 192/422 (45%), Gaps = 40/422 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L V  NKL  +S         L  L  S+N +  +PE I  +  L+ LDL  N+I  
Sbjct: 319 LTTLGVSQNKL--MSMKFAVYLKQLEHLYLSRNSIEVIPEEIDHMKSLVTLDLSWNKIKE 376

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +PSSI    SL    +  N LSA+P  LG    L  LDL  N+L     +  +LR L   
Sbjct: 377 LPSSIGNVKSLKSLNVCGNKLSAIPDSLGHGQVLTFLDLSHNRLTVLPSDLRKLRNLETF 436

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS- 178
            +S+N ++ +P  I  +  LR L ++ N L  L         P  L +L   + +N  S 
Sbjct: 437 HVSHNEIALMPKSIDFLYQLRSLDVSKNGLNELN-------LPKTLTHL--NMSDNPLSI 487

Query: 179 EASTTKEDLITMATRLSVTS-KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
             +  +  ++ M  +  + +   L+L  + +  IP  ++    +  LDLS N+++ L   
Sbjct: 488 NPTDIRSTIVVMGDKDHLRNLTSLALCNLGMDEIPPSVFNLRCLKHLDLSNNALKTLTDN 547

Query: 238 LSSCASLQTLILSRNKIKDWPDAI---------------LTSLS-------SLSCLKLDN 275
           +     L ++    N+I   P+ I               LTS S       SL  L + N
Sbjct: 548 VCKMRGLVSITACHNEITALPEKISALKKLEKLHVSNNGLTSFSPSLGRLVSLCDLNMSN 607

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N +  +P D F D+  L  +DLS N + + P++     L  L  L + +  + + P +  
Sbjct: 608 NKITLLP-DNFGDLNKLINMDLSENELLNFPKD-QIDVLASLLHLNISKNHIDQMPIEFP 665

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            L +L++L  + N L+SIP     + SL  LD+SDN I +LP ++  + P L+ + +  N
Sbjct: 666 YLYRLKVLRAASNDLKSIPSDMDKMKSLEVLDISDNIIESLPEKICKM-PELKEINVSEN 724

Query: 395 PL 396
            +
Sbjct: 725 KI 726



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 168/400 (42%), Gaps = 71/400 (17%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           I     L  L  S N +  +PE I +L   L  LD+  N I  +P  +     L  F + 
Sbjct: 243 IGGVRFLHYLNLSHNHIKTLPEEICNLGYALDHLDISHNEIPVLPDGMKSLRKLTYFDVS 302

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMT 137
           NN +  LP  + +L  L TL +  N+L          +L  L LS NS+  +P EI  M 
Sbjct: 303 NNEVEYLPESIRELPCLTTLGVSQNKLMSMKFAVYLKQLEHLYLSRNSIEVIPEEIDHMK 362

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +L  L L+ N ++ L SS+ N      +K L+S                           
Sbjct: 363 SLVTLDLSWNKIKELPSSIGN------VKSLKS--------------------------- 389

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L++ G  LSAIP  +     +T LDLS N +  LP +L    +L+T  +S N+I   
Sbjct: 390 ---LNVCGNKLSAIPDSLGHGQVLTFLDLSHNRLTVLPSDLRKLRNLETFHVSHNEIALM 446

Query: 258 PDAI-----LTSL-------------SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           P +I     L SL              +L+ L + +NPL   P+D    I ++   D   
Sbjct: 447 PKSIDFLYQLRSLDVSKNGLNELNLPKTLTHLNMSDNPLSINPTDIRSTIVVMGDKDHLR 506

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           N+ SL                L  + + E P  +  L+ L+ LDLS N+L+++ +    +
Sbjct: 507 NLTSLA---------------LCNLGMDEIPPSVFNLRCLKHLDLSNNALKTLTDNVCKM 551

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
             L  +    N I+ALP ++  L+  L+ L +  N L S 
Sbjct: 552 RGLVSITACHNEITALPEKISALK-KLEKLHVSNNGLTSF 590



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 112/223 (50%), Gaps = 17/223 (7%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           LSA P  +    ++  L +  N+I++LPP +  C  LQ L  S NKI+  P +I    +S
Sbjct: 101 LSAFPGSVSRMKKLEVLIIKNNAIKKLPPAIHKCTGLQKLYASNNKIRALPKSI--GKAS 158

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           +S + + +N +R +    ++   M   +DLS N I  +P        P++Q++ L R  +
Sbjct: 159 ISYMDVSSNMIRSIKKGLYE---MTAEVDLSDNRITEMPT--AAVKKPNIQKINLARNGV 213

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
              P +I +L +L  LDLS N++Q IP     +  L  L+LS N+I  LP E+  L  +L
Sbjct: 214 TLIPENIDKLSRLTWLDLSHNAVQEIPAQIGGVRFLHYLNLSHNHIKTLPEEICNLGYAL 273

Query: 387 QALRLDGNP-------LRSIRR-TILDRGTKAVLKYLKDKIPE 421
             L +  N        ++S+R+ T  D     V +YL + I E
Sbjct: 274 DHLDISHNEIPVLPDGMKSLRKLTYFDVSNNEV-EYLPESIRE 315


>gi|149040409|gb|EDL94447.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_b
           [Rattus norvegicus]
          Length = 524

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 195/406 (48%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++A+  ++  L +L TL +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  ++ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 283 --------------LSSLNR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +P  + E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +LP L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITAVEK-DVRNLPRLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 TLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLNRLGLRYNRLSAIPRSL 303



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 19/285 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P +
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLPEE 512


>gi|421092130|ref|ZP_15552886.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
 gi|409999073|gb|EKO49773.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
          Length = 364

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 167/373 (44%), Gaps = 71/373 (19%)

Query: 39  PETIGSLSRLIR-------LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           P T   L++ I+       L+L  NR  ++P  I    +L E  +  N L+ LP E+G+L
Sbjct: 32  PGTYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQL 91

Query: 92  SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
             L  L+LH NQ      E  +L  L  L L +N L+ LP EIG++  LR L LT N  +
Sbjct: 92  KNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFK 151

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
           T+   +        LK L++                              L+L    L+A
Sbjct: 152 TIPKEI------GQLKNLQT------------------------------LNLGNNQLTA 175

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +P+EI +   +  LDL  N +  LP E+     LQ L LS N++   P+ I   L +L  
Sbjct: 176 LPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEI-GQLQNLQE 234

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 330
           L L +N L  +P++                            L +LQ LYLR  +L    
Sbjct: 235 LYLGSNQLTILPNE-------------------------IGQLKNLQTLYLRSNRLTTLS 269

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            DI +LQ L+ LDL  N L + P+  + L +L  LDL  N ++ LP E+G L+ +LQ   
Sbjct: 270 KDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLK-NLQVFE 328

Query: 391 LDGNPLRSIRRTI 403
           L+ N L ++ + I
Sbjct: 329 LNNNQLTTLPKEI 341



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 162/357 (45%), Gaps = 63/357 (17%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L EL  +KN L  +P+ IG L  L +L+LH N+   +P  +    +L E  +G+
Sbjct: 65  IGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGS 124

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP E+G+L  L  L L  NQ K    E  QL+ L  L+L NN L+ LP EIG++ 
Sbjct: 125 NRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQ 184

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L+ L L  N L TL + +              +L + +D   ST +             
Sbjct: 185 NLKSLDLGSNRLTTLPNEI-------------GQLQKLQDLYLSTNR------------- 218

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
                     L+ +P+EI +   + +L L  N +  LP E+    +LQTL L  N++   
Sbjct: 219 ----------LTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTL 268

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
              I   L +L  L L NN L   P +  + +  LQ+LDL  N                 
Sbjct: 269 SKDI-EQLQNLKSLDLWNNQLTTFPKE-IEQLKNLQVLDLGSN----------------- 309

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
                  QL   P +I +L+ L++ +L+ N L ++P+    L +L EL L DN +S+
Sbjct: 310 -------QLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQLSS 359



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 82/153 (53%), Gaps = 2/153 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++  N+LT L N  I     L  L    N L  +P  IG L +L  L L  NR+ +
Sbjct: 163 LQTLNLGNNQLTALPNE-IGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTT 221

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E Y+G+N L+ LP E+G+L  L TL L SN+L     +  QL+ L  L
Sbjct: 222 LPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSL 281

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           DL NN L+  P EI ++  L+ L L  N L TL
Sbjct: 282 DLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTL 314



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 7/221 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E   T  DL T A +  +  + L+L       +P EI +   + +L+L++N +  LP 
Sbjct: 28  QAEEPGTYRDL-TKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPK 86

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    +L+ L L  N+    P  +   L +L  L L +N L  +P++    +  L++L 
Sbjct: 87  EIGQLKNLRKLNLHDNQFTILPKEV-EKLENLKELSLGSNRLTTLPNE-IGQLKNLRVLK 144

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L++N   ++P+      L +LQ L L   QL   P +I +LQ L+ LDL  N L ++P  
Sbjct: 145 LTHNQFKTIPK--EIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNE 202

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
              L  L +L LS N ++ LP E+G L+ +LQ L L  N L
Sbjct: 203 IGQLQKLQDLYLSTNRLTTLPNEIGQLQ-NLQELYLGSNQL 242


>gi|308504609|ref|XP_003114488.1| CRE-LET-413 protein [Caenorhabditis remanei]
 gi|308261873|gb|EFP05826.1| CRE-LET-413 protein [Caenorhabditis remanei]
          Length = 772

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 175/376 (46%), Gaps = 47/376 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+++VL  + I   T L EL  ++N +  +PET+ +   L  L+L+ N    +P 
Sbjct: 64  LDVSDNEVSVLPPD-IGQLTQLIELNLNRNTITDIPETLKNCKFLTNLNLNGNPFTRLPE 122

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           SI  C S+    + +  L++LPA +G L  L  L+   N LK   +   +L+ L  LDL 
Sbjct: 123 SICECSSITILSLNDTTLTSLPANIGSLVNLRVLEARENHLKTIPLSIVELKQLEELDLG 182

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSE 179
            N +  LP +IGK+T+LR+     N L TL  S+ +      L       +RLPEN  S 
Sbjct: 183 QNEIEDLPAKIGKLTSLREFYADMNNLGTLPDSISDCRMLDQLDVSENQINRLPENLGSM 242

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +S T                +L++   ++  +P  I     +  L + RN++ +L PE+ 
Sbjct: 243 SSLT----------------DLNVSMNDIPELPRSIGNLKRLQMLKVERNNLTQLTPEIG 286

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C++L  L L +N + D PD+I   L +L+ L +D N L ++P                 
Sbjct: 287 HCSALTELYLGQNMLTDLPDSI-GDLKNLTTLNVDCNNLIEIPE---------------- 329

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                       S   L  L LR+  + E P  I + + + +LD++ N L S+P   K L
Sbjct: 330 ---------TIGSCKSLTVLSLRQNLISELPMTIGKCENMTVLDVASNKLTSLPFTVKVL 380

Query: 360 TSLTELDLSDNNISAL 375
             L  L LS+N   ++
Sbjct: 381 YKLQALWLSENQTQSI 396



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 166/377 (44%), Gaps = 64/377 (16%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           L  S N ++ +P  IG L++LI L+L++N I  IP ++  C  L    +  N  + LP  
Sbjct: 64  LDVSDNEVSVLPPDIGQLTQLIELNLNRNTITDIPETLKNCKFLTNLNLNGNPFTRLPES 123

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 147
           + + S +                      ++L L++ +L+ LP  IG +  LR L    N
Sbjct: 124 ICECSSI----------------------TILSLNDTTLTSLPANIGSLVNLRVLEAREN 161

Query: 148 PLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
            L+T+  S+V       LK L    L +NE        EDL     +L+ + +E   +  
Sbjct: 162 HLKTIPLSIVE------LKQLEELDLGQNE-------IEDLPAKIGKLT-SLREFYADMN 207

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
           NL  +P  I +   + +LD+S N I  LP  L S +SL  L +S N I + P +I  +L 
Sbjct: 208 NLGTLPDSISDCRMLDQLDVSENQINRLPENLGSMSSLTDLNVSMNDIPELPRSI-GNLK 266

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
            L  LK++ N L Q+                          P       L ELYL +  L
Sbjct: 267 RLQMLKVERNNLTQL-------------------------TPEIGHCSALTELYLGQNML 301

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
            + P  I  L+ L  L++  N+L  IPE   +  SLT L L  N IS LP  +G  E ++
Sbjct: 302 TDLPDSIGDLKNLTTLNVDCNNLIEIPETIGSCKSLTVLSLRQNLISELPMTIGKCE-NM 360

Query: 387 QALRLDGNPLRSIRRTI 403
             L +  N L S+  T+
Sbjct: 361 TVLDVASNKLTSLPFTV 377



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 4/154 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LDV  N++  L  NL  S + LT+L  S N +  +P +IG+L RL  L + +N +  
Sbjct: 222 LDQLDVSENQINRLPENL-GSMSSLTDLNVSMNDIPELPRSIGNLKRLQMLKVERNNLTQ 280

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSV 118
           +   I  C +L E Y+G N L+ LP  +G L  L TL++  N L E    + +C+  L+V
Sbjct: 281 LTPEIGHCSALTELYLGQNMLTDLPDSIGDLKNLTTLNVDCNNLIEIPETIGSCK-SLTV 339

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L L  N +S LP  IGK   +  L +  N L +L
Sbjct: 340 LSLRQNLISELPMTIGKCENMTVLDVASNKLTSL 373



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 119/271 (43%), Gaps = 63/271 (23%)

Query: 107 YCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
           +C+  ACQ ++  LD S ++L  +P +I +   L  L LT N ++ L   L        L
Sbjct: 5   FCLPMACQRQVDSLDRSQSNLQSVPTDIFRFRKLEDLNLTMNNIKELDRRLFT------L 58

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
           ++LR                        L V+  E+S+       +P +I +  ++ +L+
Sbjct: 59  RHLRI-----------------------LDVSDNEVSV-------LPPDIGQLTQLIELN 88

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           L+RN+I ++P  L +C  L  L L+ N     P++I    SS++ L L++  L       
Sbjct: 89  LNRNTITDIPETLKNCKFLTNLNLNGNPFTRLPESI-CECSSITILSLNDTTL------- 140

Query: 286 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
                            SLP N    SL +L+ L  R   L+  P  I+ L+QL  LDL 
Sbjct: 141 ----------------TSLPAN--IGSLVNLRVLEARENHLKTIPLSIVELKQLEELDLG 182

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           QN ++ +P     LTSL E     NN+  LP
Sbjct: 183 QNEIEDLPAKIGKLTSLREFYADMNNLGTLP 213



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 6/101 (5%)

Query: 308 PPFSSLP-----HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
           P F  LP      +  L   +  L+  PTDI R ++L  L+L+ N+++ +      L  L
Sbjct: 2   PAFFCLPMACQRQVDSLDRSQSNLQSVPTDIFRFRKLEDLNLTMNNIKELDRRLFTLRHL 61

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             LD+SDN +S LPP++G L   L  L L+ N +  I  T+
Sbjct: 62  RILDVSDNEVSVLPPDIGQLT-QLIELNLNRNTITDIPETL 101


>gi|194900450|ref|XP_001979770.1| GG16778 [Drosophila erecta]
 gi|261277885|sp|B3P3E8.1|SUR8_DROER RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|190651473|gb|EDV48728.1| GG16778 [Drosophila erecta]
          Length = 644

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 196/410 (47%), Gaps = 20/410 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  + +TV+ +  +     LTEL    N +  +P  IG L  L  L L++N + S
Sbjct: 165 IKRLDLSKSSITVIPST-VKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTS 223

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S+  C  L    + +N L+ +P  + +L  L TL L  N++     +  QL  L++L
Sbjct: 224 LPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 283

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N +  L   IG +  L  L ++ N L  L   + N    + L    + L +  DS 
Sbjct: 284 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 343

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-L 238
            +   + L+ +  R +            L+++P+ +     + + ++  N I +LP   L
Sbjct: 344 GNL--KSLVRLGMRYN-----------RLNSVPATLKNCKSMDEFNVEGNGITQLPDGML 390

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +S + L T+ LSRN+   +P       +++  + L++N + ++P   F     L  L++ 
Sbjct: 391 ASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMK 450

Query: 299 YNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N+  +LP +    +  ++ EL L    L++ P DI+ LQ L IL LS N L+ IP    
Sbjct: 451 ENMLTALPLD--IGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 508

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
           NL  L  LDL +N I  LP E+GLL   LQ L L  N +  + R+I   G
Sbjct: 509 NLRRLRILDLEENRIEVLPHEIGLLH-ELQRLILQTNQITMLPRSIGHLG 557



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 193/460 (41%), Gaps = 100/460 (21%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-- 107
           RLDL ++ I  IPS++  C  L E Y+ +N +  LP E+G L  L  L L+ N L     
Sbjct: 167 RLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSLPE 226

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 167
            ++ C  +L VLDL +N L+ +PP I ++ +L  L L  N +  +   L       L+  
Sbjct: 227 SLQNCS-QLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLR-----QLVNL 280

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL------EGMNLSA----------I 211
               L EN+  E  +    L+ + T L V+   L          +NLSA          I
Sbjct: 281 TMLSLRENKIRELGSAIGALVNLTT-LDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDI 339

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P  I     + +L +  N +  +P  L +C S+    +  N I   PD +L SLS L+ +
Sbjct: 340 PDSIGNLKSLVRLGMRYNRLNSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTI 399

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP----------------ENPPFSSLP 314
            L  N     P+ G      +  ++L +N I  +P                EN   ++LP
Sbjct: 400 TLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENM-LTALP 458

Query: 315 -------HLQELYLRRMQLREAPTDILRLQ-----------------------QLRILDL 344
                  ++ EL L    L++ P DI+ LQ                       +LRILDL
Sbjct: 459 LDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDL 518

Query: 345 SQNSLQSIPE-----------------------GFKNLTSLTELDLSDNNISALPPELGL 381
            +N ++ +P                           +L +LT L +S+NN+  LP E+G 
Sbjct: 519 EENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGS 578

Query: 382 LEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK-DKIP 420
           LE SL+ L ++ NP   + +   +      LKYL  DK P
Sbjct: 579 LE-SLENLYINQNP--GLEKLPFELALCQNLKYLNIDKCP 615



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 179/407 (43%), Gaps = 68/407 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I +   LT L  S N L  +PE IG+   L  LDL  N +L IP SI    SL    M  
Sbjct: 297 IGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRY 356

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKM 136
           N L+++PA L     +   ++  N + +    + A    L+ + LS N  +  P      
Sbjct: 357 NRLNSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYP------ 410

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEASTTKEDLITMATRLS 195
                   TG P +      +N      L++ R  ++P    S A           T+L+
Sbjct: 411 --------TGGPAQFTNVYSIN------LEHNRIDKIPYGIFSRAKGL--------TKLN 448

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
           +       E M L+A+P +I     + +L+L+ N++Q+LP ++ +  +L+ LILS N +K
Sbjct: 449 MK------ENM-LTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLK 501

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             P+ I                          ++  L+ILDL  N I  LP       L 
Sbjct: 502 KIPNTI-------------------------GNLRRLRILDLEENRIEVLPHE--IGLLH 534

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NIS 373
            LQ L L+  Q+   P  I  L  L  L +S+N+LQ +PE   +L SL  L ++ N  + 
Sbjct: 535 ELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLE 594

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            LP EL L + +L+ L +D  PL +I   I   G   VL++LK   P
Sbjct: 595 KLPFELALCQ-NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSP 640



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 118/281 (41%), Gaps = 62/281 (22%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E N++  +   + +    LT+L   +N+L  +P  IG+   ++ L+L  N +  +P 
Sbjct: 423 INLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPD 482

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I    +L    + NN L  +P  +G L                       RL +LDL  
Sbjct: 483 DIMNLQNLEILILSNNMLKKIPNTIGNLR----------------------RLRILDLEE 520

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N +  LP EIG +  L++L+L  N +  L         P  + +L +             
Sbjct: 521 NRIEVLPHEIGLLHELQRLILQTNQITML---------PRSIGHLGN------------- 558

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCA 242
                   T LSV+         NL  +P EI     +  L +++N  +++LP EL+ C 
Sbjct: 559 -------LTHLSVSEN-------NLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQ 604

Query: 243 SLQTLILSRNKIKDWPDAILTSLSS--LSCLKLDNNPLRQV 281
           +L+ L + +  +   P  I     S  L  LK+ ++P RQ+
Sbjct: 605 NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKM-HSPYRQM 644



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           R + ++ LDLS++S+  IP   K    LTEL L  N I  LPPE+G L  SL+ L L+ N
Sbjct: 161 RDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCL-VSLRNLALNEN 219

Query: 395 PLRSIRRTILDRGTKAVLKYLKDKIPE 421
            L S+  ++ +     VL    +K+ E
Sbjct: 220 SLTSLPESLQNCSQLKVLDLRHNKLAE 246


>gi|320165725|gb|EFW42624.1| hypothetical protein CAOG_07756 [Capsaspora owczarzaki ATCC 30864]
          Length = 880

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 198/429 (46%), Gaps = 23/429 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET-IGSLSRLIRLDLHQNRIL 59
           ++ LD+  N+LT +     +  T LT+L+   N L+ +P +    L+ LI L L+ N+I 
Sbjct: 373 LTYLDLSLNQLTSIPAGAFSGLTALTQLLLFNNWLSAVPSSAFTGLTALIYLYLNNNQIT 432

Query: 60  SIPS-SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQ--LR 115
           ++ + + +G  +L +  +  N ++ +PA     LS L  L L+SN++    V A      
Sbjct: 433 TVAANAFTGLTALVQLQLYGNQITTIPASAFAGLSALVQLYLYSNRITAIFVNAFTGLTH 492

Query: 116 LSVLDLSNNSLSGLPP-EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           LS+L+LSNN ++ LP      +T + +L L  N L  + SS   G T     YL      
Sbjct: 493 LSLLELSNNQITSLPANAFAGLTAMTQLSLYNNSLSAVPSSAFTGLTALQALYLY----- 547

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQE 233
             +++ +T   +  T  T L     +L L    ++ IP+  +     + +L L+ N I  
Sbjct: 548 --NNQITTVAANAFTGLTAL----VQLHLYRNQITTIPASAFAGLSALVQLYLNSNRITT 601

Query: 234 L-PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
           +      S   L  L +S N+I   P    T L++++ L L NN    VPS  F  +  L
Sbjct: 602 IFANAFPSLTKLTYLDISNNQITSLPANAFTGLTAMTQLHLYNNLFSTVPSSAFTGLTAL 661

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQ 350
           Q L L  N I+S+  N  F+SL  L +L L    +   P      L +L +L L  N L 
Sbjct: 662 QALFLFNNQISSVAANA-FTSLTALIQLQLYGNLITTIPAGAFSGLSKLNLLQLYNNWLS 720

Query: 351 SIPE-GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTK 409
           +IP   F  LT+LT+L L  N I+ +P        +L  L L GN + +I  +     T 
Sbjct: 721 AIPSSAFTGLTALTQLRLDTNQITTVPANAFSGLTALIYLSLYGNQITTISASAFAGLTA 780

Query: 410 AVLKYLKDK 418
               YL D 
Sbjct: 781 LQALYLNDN 789



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 197/433 (45%), Gaps = 49/433 (11%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL-SRLIRLDLHQNRILSI 61
           +L ++ N++T +  N  +  T L  L    N +  +     S  + L++L L+ N+I +I
Sbjct: 255 QLRLDTNQITTVPANAFSGLTALIYLYLYNNQITTVATNAFSGPTALVQLQLYGNQITTI 314

Query: 62  PSS-ISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLS 117
           PSS ++G  +L + Y+ NN ++++PA     L+ L  L L +N +      A     +L+
Sbjct: 315 PSSALTGLSALTQLYLYNNQITSVPANGFSGLTALTDLRLSNNTITSILANAFTGLTKLT 374

Query: 118 VLDLSNNSLSGLPP-EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 176
            LDLS N L+ +P      +T L +LLL  N L  + SS   G T  +  YL        
Sbjct: 375 YLDLSLNQLTSIPAGAFSGLTALTQLLLFNNWLSAVPSSAFTGLTALIYLYL-------N 427

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQEL- 234
           +++ +T   +  T  T L     +L L G  ++ IP+  +     + +L L  N I  + 
Sbjct: 428 NNQITTVAANAFTGLTAL----VQLQLYGNQITTIPASAFAGLSALVQLYLYSNRITAIF 483

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
               +    L  L LS N+I   P      L++++ L L NN L  VPS  F  +  LQ 
Sbjct: 484 VNAFTGLTHLSLLELSNNQITSLPANAFAGLTAMTQLSLYNNSLSAVPSSAFTGLTALQA 543

Query: 295 LDLSYN--IASLPENPPFSSLPHLQELYLRRMQLREAP--------------------TD 332
           L L YN  I ++  N  F+ L  L +L+L R Q+   P                    T 
Sbjct: 544 LYL-YNNQITTVAAN-AFTGLTALVQLHLYRNQITTIPASAFAGLSALVQLYLNSNRITT 601

Query: 333 ILR-----LQQLRILDLSQNSLQSIPE-GFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
           I       L +L  LD+S N + S+P   F  LT++T+L L +N  S +P        +L
Sbjct: 602 IFANAFPSLTKLTYLDISNNQITSLPANAFTGLTAMTQLHLYNNLFSTVPSSAFTGLTAL 661

Query: 387 QALRLDGNPLRSI 399
           QAL L  N + S+
Sbjct: 662 QALFLFNNQISSV 674



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 187/407 (45%), Gaps = 41/407 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET-IGSLSRLIRLDLHQNRIL 59
           +S L++  N++T L  N  A  T +T+L    N L+ +P +    L+ L  L L+ N+I 
Sbjct: 493 LSLLELSNNQITSLPANAFAGLTAMTQLSLYNNSLSAVPSSAFTGLTALQALYLYNNQIT 552

Query: 60  SIPS-SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEAC--QLR 115
           ++ + + +G  +L + ++  N ++ +PA     LS L  L L+SN++      A     +
Sbjct: 553 TVAANAFTGLTALVQLHLYRNQITTIPASAFAGLSALVQLYLNSNRITTIFANAFPSLTK 612

Query: 116 LSVLDLSNNSLSGLPP-EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           L+ LD+SNN ++ LP      +T + +L L  N   T+ SS   G T     +L +    
Sbjct: 613 LTYLDISNNQITSLPANAFTGLTAMTQLHLYNNLFSTVPSSAFTGLTALQALFLFNNQIS 672

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
           +  + A T+   LI           +L L G  ++ IP+  +    ++KL+L        
Sbjct: 673 SVAANAFTSLTALI-----------QLQLYGNLITTIPAGAFSG--LSKLNL-------- 711

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
                       L L  N +   P +  T L++L+ L+LD N +  VP++ F  +  L  
Sbjct: 712 ------------LQLYNNWLSAIPSSAFTGLTALTQLRLDTNQITTVPANAFSGLTALIY 759

Query: 295 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE-APTDILRLQQLRILDLSQNSLQSIP 353
           L L  N  +      F+ L  LQ LYL    +   A      L  L  LDLS + + SIP
Sbjct: 760 LSLYGNQITTISASAFAGLTALQALYLNDNTITTIAANAFAGLTALNWLDLSDSQITSIP 819

Query: 354 EG-FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
              F +L +L +L+L +N +SA+P        +L  L + GN + +I
Sbjct: 820 ANVFSSLPALAQLNLYNNWLSAVPTSAFTGLTALTQLTMYGNRITTI 866



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 116/472 (24%), Positives = 210/472 (44%), Gaps = 75/472 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET-IGSLSRLIRLDLHQNRIL 59
           ++ + ++ N++T +  N  +  + L  L  + N L+ +P +    L+ LI+L L+ N+I 
Sbjct: 85  LTYMRLDTNQITTVPANAFSGLSTLNTLQLNNNWLSAIPSSAFTGLTALIQLLLNNNQIT 144

Query: 60  SIPSS-ISGCCSLAEFYMGNNALSALPA-ELGKLSKLGTLDLHSNQLKEYCVEAC----- 112
           ++PSS  +G  +L   Y+ NN ++ +       L+ L TL L++NQ+      A      
Sbjct: 145 TVPSSAFTGLTALQILYLHNNQIATVAINAFSGLTALQTLYLYNNQIITVATNAFSGLAA 204

Query: 113 ---------QL------------RLSVLDLSNNSLSGLPPE-IGKMTTLRKLLLTGNPLR 150
                    Q+            +L+ L L+NN LS +P      +T L +L L  N + 
Sbjct: 205 LQVLRLDTNQITTVPANAFSGLSKLNTLQLNNNWLSAIPSSAFTGLTALIQLRLDTNQIT 264

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA--------------TRLSV 196
           T+ ++  +G T  +  YL +       + A +    L+ +               T LS 
Sbjct: 265 TVPANAFSGLTALIYLYLYNNQITTVATNAFSGPTALVQLQLYGNQITTIPSSALTGLSA 324

Query: 197 TSKELSLEGMNLSAIPSEIWEA-------------------------GEITKLDLSRNSI 231
            + +L L    ++++P+  +                            ++T LDLS N +
Sbjct: 325 LT-QLYLYNNQITSVPANGFSGLTALTDLRLSNNTITSILANAFTGLTKLTYLDLSLNQL 383

Query: 232 QELPP-ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
             +P    S   +L  L+L  N +   P +  T L++L  L L+NN +  V ++ F  + 
Sbjct: 384 TSIPAGAFSGLTALTQLLLFNNWLSAVPSSAFTGLTALIYLYLNNNQITTVAANAFTGLT 443

Query: 291 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNS 348
            L  L L  N I ++P +  F+ L  L +LYL   ++     +    L  L +L+LS N 
Sbjct: 444 ALVQLQLYGNQITTIPAS-AFAGLSALVQLYLYSNRITAIFVNAFTGLTHLSLLELSNNQ 502

Query: 349 LQSIPE-GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           + S+P   F  LT++T+L L +N++SA+P        +LQAL L  N + ++
Sbjct: 503 ITSLPANAFAGLTAMTQLSLYNNSLSAVPSSAFTGLTALQALYLYNNQITTV 554



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 114/240 (47%), Gaps = 6/240 (2%)

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPP-ELSSC 241
              L  + T +  T+  L L+   +++I S  +     +T + L  N I  +P    S  
Sbjct: 47  SRSLTAIPTGIPATTTTLYLQSNQITSISSSAFTGLTALTYMRLDTNQITTVPANAFSGL 106

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 300
           ++L TL L+ N +   P +  T L++L  L L+NN +  VPS  F  +  LQIL L  N 
Sbjct: 107 STLNTLQLNNNWLSAIPSSAFTGLTALIQLLLNNNQITTVPSSAFTGLTALQILYLHNNQ 166

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIPE-GFKN 358
           IA++  N  FS L  LQ LYL   Q+    T+    L  L++L L  N + ++P   F  
Sbjct: 167 IATVAIN-AFSGLTALQTLYLYNNQIITVATNAFSGLAALQVLRLDTNQITTVPANAFSG 225

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           L+ L  L L++N +SA+P        +L  LRLD N + ++        T  +  YL + 
Sbjct: 226 LSKLNTLQLNNNWLSAIPSSAFTGLTALIQLRLDTNQITTVPANAFSGLTALIYLYLYNN 285



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 158/391 (40%), Gaps = 82/391 (20%)

Query: 37  GMPETIGSLSRLIRLDLHQNRILSIPSS-ISGCCSLAEFYMGNNALSALPAELGKLSKLG 95
           G+P T  +L       L  N+I SI SS  +G  +L    +  N ++ +PA     S L 
Sbjct: 56  GIPATTTTL------YLQSNQITSISSSAFTGLTALTYMRLDTNQITTVPAN--AFSGLS 107

Query: 96  TLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE-IGKMTTLRKLLLTGNPLRTLRS 154
           TL+                    L L+NN LS +P      +T L +LLL  N + T+ S
Sbjct: 108 TLN-------------------TLQLNNNWLSAIPSSAFTGLTALIQLLLNNNQITTVPS 148

Query: 155 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 214
           S   G T   + YL                  + T+A          +  G+        
Sbjct: 149 SAFTGLTALQILYLH--------------NNQIATVAIN--------AFSGLT------- 179

Query: 215 IWEAGEITKLDLSRNSIQELPP-ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
                 +  L L  N I  +     S  A+LQ L L  N+I   P    + LS L+ L+L
Sbjct: 180 -----ALQTLYLYNNQIITVATNAFSGLAALQVLRLDTNQITTVPANAFSGLSKLNTLQL 234

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR----- 327
           +NN L  +PS  F  +  L  L L  N I ++P N  FS L  L  LYL   Q+      
Sbjct: 235 NNNWLSAIPSSAFTGLTALIQLRLDTNQITTVPAN-AFSGLTALIYLYLYNNQITTVATN 293

Query: 328 --EAPTDILRLQQLRILDLSQNSLQSIP-EGFKNLTSLTELDLSDNNISALPPELGLLEP 384
               PT +++LQ      L  N + +IP      L++LT+L L +N I+++P        
Sbjct: 294 AFSGPTALVQLQ------LYGNQITTIPSSALTGLSALTQLYLYNNQITSVPANGFSGLT 347

Query: 385 SLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           +L  LRL  N + SI        TK  L YL
Sbjct: 348 ALTDLRLSNNTITSILANAFTGLTK--LTYL 376


>gi|429962971|gb|ELA42515.1| hypothetical protein VICG_00614 [Vittaforma corneae ATCC 50505]
          Length = 835

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 174/376 (46%), Gaps = 45/376 (11%)

Query: 42  IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 101
           IG L  L +LDL  N + ++P  I    +L    + NN L +LP E+ +L  L  LDL  
Sbjct: 63  IGRLVNLEKLDLKGNNLKALPPEIGELKNLQHLDLRNNKLESLPPEIEELKNLQHLDLGD 122

Query: 102 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 160
           N+LK    E  +L+ L  LDL  N     P  I K+  L +L+L  N           G 
Sbjct: 123 NKLKALPYEVEELKNLQHLDLGYNQFESFPTVIRKLKNLERLILNNNKF---------GL 173

Query: 161 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 220
            P  +  L+                       +L +    L L G  L  +P EI E  E
Sbjct: 174 FPIEIAELK-----------------------KLQI----LYLRGNKLKLLPDEIGEMKE 206

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
           + +L L  N ++  P  ++    LQTL L  N+ + +P  ++  L +L  L L++N L+ 
Sbjct: 207 LRELGLDDNELESFPTVIAELRKLQTLDLGYNEFESFP-TVIVKLKNLQYLFLNDNKLKL 265

Query: 281 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
           +P D   ++  L+ L+L  N + +LP  P    L +L  L L +  L   P  I +L+ L
Sbjct: 266 LP-DEIGELENLRELNLRGNKLETLP--PVIGELENLYVLELYKNNLESLPDVIGKLKNL 322

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            +L+L  N ++++P     L +L EL LSDN +  LP E+  L  SL+ L L GN +  +
Sbjct: 323 GMLNLGNNKIETLPAAIGELQNLRELYLSDNKLETLPVEIEKLSGSLRLLNLMGNNMSEV 382

Query: 400 ---RRTILDRGTKAVL 412
               RT+  R  +A+ 
Sbjct: 383 GDGERTVGRRELRAIF 398



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 128/284 (45%), Gaps = 42/284 (14%)

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 176
           +V+ +    +  +  +IG++  L KL L GN L+ L       P    LK L        
Sbjct: 47  TVISICRQGIRFIGSDIGRLVNLEKLDLKGNNLKAL------PPEIGELKNL-------- 92

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
                                 + L L    L ++P EI E   +  LDL  N ++ LP 
Sbjct: 93  ----------------------QHLDLRNNKLESLPPEIEELKNLQHLDLGDNKLKALPY 130

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    +LQ L L  N+ + +P  ++  L +L  L L+NN     P +   ++  LQIL 
Sbjct: 131 EVEELKNLQHLDLGYNQFESFP-TVIRKLKNLERLILNNNKFGLFPIE-IAELKKLQILY 188

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N +  LP+      +  L+EL L   +L   PT I  L++L+ LDL  N  +S P  
Sbjct: 189 LRGNKLKLLPD--EIGEMKELRELGLDDNELESFPTVIAELRKLQTLDLGYNEFESFPTV 246

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
              L +L  L L+DN +  LP E+G LE +L+ L L GN L ++
Sbjct: 247 IVKLKNLQYLFLNDNKLKLLPDEIGELE-NLRELNLRGNKLETL 289



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 106/224 (47%), Gaps = 25/224 (11%)

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
           V +  +S+    +  I S+I     + KLDL  N+++ LPPE+    +LQ L L  NK++
Sbjct: 44  VDTTVISICRQGIRFIGSDIGRLVNLEKLDLKGNNLKALPPEIGELKNLQHLDLRNNKLE 103

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP--------- 305
             P  I   L +L  L L +N L+ +P +  +++  LQ LDL YN   S P         
Sbjct: 104 SLPPEI-EELKNLQHLDLGDNKLKALPYE-VEELKNLQHLDLGYNQFESFPTVIRKLKNL 161

Query: 306 -----ENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
                 N  F   P        LQ LYLR  +L+  P +I  +++LR L L  N L+S P
Sbjct: 162 ERLILNNNKFGLFPIEIAELKKLQILYLRGNKLKLLPDEIGEMKELRELGLDDNELESFP 221

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
                L  L  LDL  N   + P  +  L+ +LQ L L+ N L+
Sbjct: 222 TVIAELRKLQTLDLGYNEFESFPTVIVKLK-NLQYLFLNDNKLK 264



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 111/272 (40%), Gaps = 61/272 (22%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           IA    L  L    N L  +P+ IG +  L  L L  N + S P+ I+            
Sbjct: 178 IAELKKLQILYLRGNKLKLLPDEIGEMKELRELGLDDNELESFPTVIA------------ 225

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
                      +L KL TLDL  N+ + +     +L+ L  L L++N L  LP EIG++ 
Sbjct: 226 -----------ELRKLQTLDLGYNEFESFPTVIVKLKNLQYLFLNDNKLKLLPDEIGELE 274

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            LR+L L GN L TL         P ++  L                E+L          
Sbjct: 275 NLRELNLRGNKLETL---------PPVIGEL----------------ENLYV-------- 301

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L L   NL ++P  I +   +  L+L  N I+ LP  +    +L+ L LS NK++  
Sbjct: 302 ---LELYKNNLESLPDVIGKLKNLGMLNLGNNKIETLPAAIGELQNLRELYLSDNKLETL 358

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
           P  I     SL  L L  N + +V  DG + +
Sbjct: 359 PVEIEKLSGSLRLLNLMGNNMSEV-GDGERTV 389



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 1/136 (0%)

Query: 18  LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           +IA    L  L    N     P  I  L  L  L L+ N++  +P  I    +L E  + 
Sbjct: 223 VIAELRKLQTLDLGYNEFESFPTVIVKLKNLQYLFLNDNKLKLLPDEIGELENLRELNLR 282

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
            N L  LP  +G+L  L  L+L+ N L+       +L+ L +L+L NN +  LP  IG++
Sbjct: 283 GNKLETLPPVIGELENLYVLELYKNNLESLPDVIGKLKNLGMLNLGNNKIETLPAAIGEL 342

Query: 137 TTLRKLLLTGNPLRTL 152
             LR+L L+ N L TL
Sbjct: 343 QNLRELYLSDNKLETL 358


>gi|297672458|ref|XP_002814314.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Pongo abelii]
          Length = 560

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 179/415 (43%), Gaps = 62/415 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN L  L    I + T L E+   +N     P+ +  L  L  +DL +N+I +IP 
Sbjct: 147 LGLTGNHLKCLPKE-IVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPE 205

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L +FYM +N L  LPA L + S+L  LDL  N L        +LR ++ + LS
Sbjct: 206 EIGHLTGLQKFYMASNNLPVLPASLCQCSQLSVLDLSHNLLHSIPKSLAELRKMTEIGLS 265

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L  +P  I + T+L  L L    L  LR S                           
Sbjct: 266 GNRLEKVPRLICRWTSLHLLYLGNTGLHRLRGSF-------------------------- 299

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                     R  V  + L L   +L   P +I     +  L L  N I +LP EL S +
Sbjct: 300 ----------RCLVNLRFLDLSRNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLS 349

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
            L+ L L+ N+   +P+ +L SL+SL  L +  +        GFK         L+Y   
Sbjct: 350 KLKILGLTGNEFLSFPEEVL-SLASLEKLYMGQD-------QGFK---------LTY--- 389

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
            +PE+     L  L+ELY+    L   P  +  +  L +LD   N L+ +P+      +L
Sbjct: 390 -VPEH--IRKLQSLKELYIENNHLEYLPISLGSMPNLEVLDCRHNLLKQLPDAICQAQAL 446

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
            EL L DN ++ LP  L  L  +L+ L L  NP+    + +   G +A+ KYLK+
Sbjct: 447 KELQLEDNLLTHLPENLDSL-VNLKVLTLMDNPMEEPPKEVCAEGNEAIWKYLKE 500



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 8/192 (4%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+AIP EI+   E+ ++ L  N I+E+P E+    + + L L +N ++    A+    S 
Sbjct: 37  LTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNTRVLYLDKNNLRSLCPALGLLSSL 96

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQIL-DLSYNIASLPENPPF--SSLPHLQELYLRRM 324
            S L L  NP   + S     +  L  L +L      L E P     +L HL+ L L   
Sbjct: 97  ES-LDLSYNP---IFSSSLVVVGFLHALRELRLYQTDLKEIPVVICKNLHHLELLGLTGN 152

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
            L+  P +I+   +LR + L +N  +  P+    L +L  +DL +N I A+P E+G L  
Sbjct: 153 HLKCLPKEIVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEEIGHL-T 211

Query: 385 SLQALRLDGNPL 396
            LQ   +  N L
Sbjct: 212 GLQKFYMASNNL 223


>gi|61557121|ref|NP_001013173.1| leucine-rich repeat protein SHOC-2 [Rattus norvegicus]
 gi|81910889|sp|Q6AYI5.1|SHOC2_RAT RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|50925627|gb|AAH79032.1| Soc-2 (suppressor of clear) homolog (C. elegans) [Rattus
           norvegicus]
 gi|149040408|gb|EDL94446.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_a
           [Rattus norvegicus]
          Length = 582

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 195/406 (48%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++A+  ++  L +L TL +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  ++ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 283 --------------LSSLNR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +P  + E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +LP L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITAVEK-DVRNLPRLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 TLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLNRLGLRYNRLSAIPRSL 303



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 149/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534


>gi|398341375|ref|ZP_10526078.1| hypothetical protein LkirsB1_19650 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 374

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 163/357 (45%), Gaps = 64/357 (17%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L EL  +KN L  +P+ IG L  L +L+LH N+   +P  +    +L E  +G+
Sbjct: 63  IGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGS 122

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP E+G+L  L  L L  NQ K    E  QL+ L  L+L NN L+ LP EIG++ 
Sbjct: 123 NRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQ 182

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L+ L L  N L TL + +              +L + +D   ST +             
Sbjct: 183 NLKSLDLGSNRLTTLPNEI-------------GQLQKLQDLYLSTNR------------- 216

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
                     L+ +P+EI +   +  L L  N +  LP E+    +LQTL L  N++   
Sbjct: 217 ----------LTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTL 266

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
              I   L +L  L L NN L   P +  + +  LQ+LDL  N                 
Sbjct: 267 SKDI-EQLQNLKSLDLWNNQLTTFPKE-IEQLKNLQVLDLGSN----------------- 307

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
                  QL   P +I +L+ L++LDL  N L ++PEG   L +L +L L++N +S+
Sbjct: 308 -------QLTTLPEEIEQLKNLQVLDLGSNQLTTLPEGIGQLQNL-QLYLNNNQLSS 356



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 176/369 (47%), Gaps = 51/369 (13%)

Query: 39  PETIGSLSRLIR-------LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           P T   L++ I+       L+L  NR  ++P  I    +L E  +  N L+ LP E+G+L
Sbjct: 30  PGTYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQL 89

Query: 92  SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
             L  L+LH NQ      E  +L  L  L L +N L+ LP EIG++  LR L LT N  +
Sbjct: 90  KNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFK 149

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
           T+   +        LK L++                              L+L    L+A
Sbjct: 150 TIPKEI------GQLKNLQT------------------------------LNLGNNQLTA 173

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +P+EI +   +  LDL  N +  LP E+     LQ L LS N++   P+ I   L +L  
Sbjct: 174 LPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEI-GQLQNLQD 232

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 329
           L L +N L  +P++    +  LQ L L  N + +L ++     L +L+ L L   QL   
Sbjct: 233 LYLGSNQLTILPNE-IGQLKNLQTLYLRSNRLTTLSKD--IEQLQNLKSLDLWNNQLTTF 289

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
           P +I +L+ L++LDL  N L ++PE  + L +L  LDL  N ++ LP  +G L+ +LQ L
Sbjct: 290 PKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTTLPEGIGQLQ-NLQ-L 347

Query: 390 RLDGNPLRS 398
            L+ N L S
Sbjct: 348 YLNNNQLSS 356



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 112/220 (50%), Gaps = 7/220 (3%)

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
           +E   T  DL T A +  +  + L+L       +P EI +   + +L+L++N +  LP E
Sbjct: 27  AEEPGTYRDL-TKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKE 85

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           +    +L+ L L  N+    P  +   L +L  L L +N L  +P++    +  L++L L
Sbjct: 86  IGQLKNLRKLNLHDNQFTILPKEV-EKLENLKELSLGSNRLTTLPNE-IGQLKNLRVLKL 143

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
           ++N   ++P+      L +LQ L L   QL   P +I +LQ L+ LDL  N L ++P   
Sbjct: 144 THNQFKTIPK--EIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEI 201

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
             L  L +L LS N ++ LP E+G L+ +LQ L L  N L
Sbjct: 202 GQLQKLQDLYLSTNRLTTLPNEIGQLQ-NLQDLYLGSNQL 240


>gi|260819644|ref|XP_002605146.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae]
 gi|229290477|gb|EEN61156.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae]
          Length = 844

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 188/416 (45%), Gaps = 49/416 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+L+ L    +A    L  L AS N+L  +PE +GSL  L  LD+  N I  +P+
Sbjct: 325 LDLSHNQLSSLER--LAGLGKLESLNASYNVLTSLPEGVGSLVSLRVLDIAHNEIKEMPA 382

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I G   L    + +N L  LP  LG    L  L+   N L        +LR L  LD+S
Sbjct: 383 KIGGLRHLKNVDVSHNKLETLPDTLGDDQLLSRLNASHNALTALPTNMRKLRTLDALDVS 442

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGN--PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
            N L  LP     + +L  L ++ N  P+ T   SL           L +R+  +  S  
Sbjct: 443 RNKLEALPEPFHFLRSLSFLDVSDNKLPVLTAPRSLTCLKVAGNPLRLPTRVAGDNKSLI 502

Query: 181 STTKEDLITMATRLSVTSKELS-----------LEGMN---------------------- 207
               +DL ++ T L +++ EL+           LE  N                      
Sbjct: 503 VRIGDDLRSL-TELDISNIELTTLPTTICNLRFLEKFNARNNKLNSLPANFHRLRQLQHL 561

Query: 208 ------LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
                 L+A+P ++ +   ++ LD S N ++E  P L    SLQ L  S NK+   PD  
Sbjct: 562 DLAHNELTALPPKLGDFAYLSHLDTSNNQVEEFMPSLVKLRSLQYLNFSNNKLTSLPDNF 621

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 320
            T LS L+ L L  N L ++P+D    +  L +L+ S N + ++P + P+  L  +Q L 
Sbjct: 622 GT-LSQLTTLDLSANQLPELPNDRIDILASLLVLNASGNQVTAIPMDMPY--LYRIQVLN 678

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           L    ++  P DI R++ L  LDLS N L+ IPE    L S+  +D+S+N + + P
Sbjct: 679 LSANVIKALPGDIWRMKSLTTLDLSDNMLEGIPETITKLPSIKSVDISNNKLRSFP 734



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 204/439 (46%), Gaps = 45/439 (10%)

Query: 2   SKLDVEGNKLTVLSNNLIASWTMLTELI-ASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           S ++V  N+L  L   +IA  T    +I AS+NL++ +PE +  L RL+ L+L  N++  
Sbjct: 183 SSVNVSNNQLRTLPA-VIAKGTCSINVIDASRNLIHTLPEGLDKLQRLVSLNLSHNQLDC 241

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQLR-LSV 118
           IP +I     L    + +N L  LP ++  L   L TL    N+L +   +   LR + V
Sbjct: 242 IPPTIGTLRYLEFLDLSHNQLDFLPDDICNLRHCLVTLHASHNRLTQLPDQIHNLRKIHV 301

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL-LKY-LRSRLPENE 176
           LDLS N L+ LP + GK  ++  L L+ N L +L      G   +L   Y + + LPE  
Sbjct: 302 LDLSENKLTSLPAKFGKTDSVVSLDLSHNQLSSLERLAGLGKLESLNASYNVLTSLPEGV 361

Query: 177 DSEAS-----TTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
            S  S         ++  M  ++      K + +    L  +P  + +   +++L+ S N
Sbjct: 362 GSLVSLRVLDIAHNEIKEMPAKIGGLRHLKNVDVSHNKLETLPDTLGDDQLLSRLNASHN 421

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPD------------------AILTSLSSLSCL 271
           ++  LP  +    +L  L +SRNK++  P+                   +LT+  SL+CL
Sbjct: 422 ALTALPTNMRKLRTLDALDVSRNKLEALPEPFHFLRSLSFLDVSDNKLPVLTAPRSLTCL 481

Query: 272 KLDNNPLR---QVPSDG-------FKDIPMLQILDLS-YNIASLPENPPFSSLPHLQELY 320
           K+  NPLR   +V  D          D+  L  LD+S   + +LP      +L  L++  
Sbjct: 482 KVAGNPLRLPTRVAGDNKSLIVRIGDDLRSLTELDISNIELTTLPTT--ICNLRFLEKFN 539

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
            R  +L   P +  RL+QL+ LDL+ N L ++P    +   L+ LD S+N +    P L 
Sbjct: 540 ARNNKLNSLPANFHRLRQLQHLDLAHNELTALPPKLGDFAYLSHLDTSNNQVEEFMPSLV 599

Query: 381 LLEPSLQALRLDGNPLRSI 399
            L  SLQ L    N L S+
Sbjct: 600 KLR-SLQYLNFSNNKLTSL 617



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 190/442 (42%), Gaps = 72/442 (16%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD + N+L  +    I     L  L  + N +  +P ++  L  L  ++   N+I S+P 
Sbjct: 72  LDAQNNRLRRVPKG-IGRLESLRSLDVTNNTVRAIPGSVSRLKYLTSIEASTNQIKSLPK 130

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE-----YCVEA------- 111
           +I    +L       N L  LP  +G  S +  +D  SN +K      Y + +       
Sbjct: 131 TIHKASALTTINAAGNKLKTLPKNIGSSSSITYIDASSNSIKTLPKSIYKLHSSVNVSNN 190

Query: 112 -------------CQL---------------------RLSVLDLSNNSLSGLPPEIGKMT 137
                        C +                     RL  L+LS+N L  +PP IG + 
Sbjct: 191 QLRTLPAVIAKGTCSINVIDASRNLIHTLPEGLDKLQRLVSLNLSHNQLDCIPPTIGTLR 250

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-EDLITMATRLSV 196
            L  L L+ N L  L   + N         LR  L     S    T+  D I    ++ V
Sbjct: 251 YLEFLDLSHNQLDFLPDDICN---------LRHCLVTLHASHNRLTQLPDQIHNLRKIHV 301

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
               L L    L+++P++  +   +  LDLS N +  L   L+    L++L  S N +  
Sbjct: 302 ----LDLSENKLTSLPAKFGKTDSVVSLDLSHNQLSSL-ERLAGLGKLESLNASYNVLTS 356

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
            P+ +  SL SL  L + +N ++++P+     +  L+ +D+S+N + +LP+      L  
Sbjct: 357 LPEGV-GSLVSLRVLDIAHNEIKEMPAK-IGGLRHLKNVDVSHNKLETLPDTLGDDQL-- 412

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           L  L      L   PT++ +L+ L  LD+S+N L+++PE F  L SL+ LD+SDN +  L
Sbjct: 413 LSRLNASHNALTALPTNMRKLRTLDALDVSRNKLEALPEPFHFLRSLSFLDVSDNKLPVL 472

Query: 376 PPELGLLEPSLQALRLDGNPLR 397
                    SL  L++ GNPLR
Sbjct: 473 TAPR-----SLTCLKVAGNPLR 489



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 190/450 (42%), Gaps = 94/450 (20%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+L  L +++      L  L AS N L  +P+ I +L ++  LDL +N++ S+P+
Sbjct: 255 LDLSHNQLDFLPDDICNLRHCLVTLHASHNRLTQLPDQIHNLRKIHVLDLSENKLTSLPA 314

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
                 S+    + +N LS+L   L  L KL +L+   N L         L  L VLD++
Sbjct: 315 KFGKTDSVVSLDLSHNQLSSL-ERLAGLGKLESLNASYNVLTSLPEGVGSLVSLRVLDIA 373

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N +  +P +IG +  L+ + ++ N L TL  +L +         L SRL  + ++    
Sbjct: 374 HNEIKEMPAKIGGLRHLKNVDVSHNKLETLPDTLGDD-------QLLSRLNASHNA---- 422

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                                    L+A+P+ + +   +  LD+SRN ++ LP       
Sbjct: 423 -------------------------LTALPTNMRKLRTLDALDVSRNKLEALPEPFHFLR 457

Query: 243 SLQTLILSRNKIK---------------------------------------------DW 257
           SL  L +S NK+                                              D 
Sbjct: 458 SLSFLDVSDNKLPVLTAPRSLTCLKVAGNPLRLPTRVAGDNKSLIVRIGDDLRSLTELDI 517

Query: 258 PDAILTSLSSLSC-------LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPP 309
            +  LT+L +  C           NN L  +P++ F  +  LQ LDL++N + +LP  P 
Sbjct: 518 SNIELTTLPTTICNLRFLEKFNARNNKLNSLPAN-FHRLRQLQHLDLAHNELTALP--PK 574

Query: 310 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
                +L  L     Q+ E    +++L+ L+ L+ S N L S+P+ F  L+ LT LDLS 
Sbjct: 575 LGDFAYLSHLDTSNNQVEEFMPSLVKLRSLQYLNFSNNKLTSLPDNFGTLSQLTTLDLSA 634

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSI 399
           N +  LP +   +  SL  L   GN + +I
Sbjct: 635 NQLPELPNDRIDILASLLVLNASGNQVTAI 664



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 169/380 (44%), Gaps = 44/380 (11%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           L A  N L  +P+ IG L  L  LD+  N + +IP S+S    L       N + +LP  
Sbjct: 72  LDAQNNRLRRVPKGIGRLESLRSLDVTNNTVRAIPGSVSRLKYLTSIEASTNQIKSLPKT 131

Query: 88  LGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 146
           + K S L T++   N+LK           ++ +D S+NS+  LP  I K+ +   + ++ 
Sbjct: 132 IHKASALTTINAAGNKLKTLPKNIGSSSSITYIDASSNSIKTLPKSIYKLHS--SVNVSN 189

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
           N LRTL + +  G                             T +  +   S+ L     
Sbjct: 190 NQLRTLPAVIAKG-----------------------------TCSINVIDASRNL----- 215

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            +  +P  + +   +  L+LS N +  +PP + +   L+ L LS N++   PD I     
Sbjct: 216 -IHTLPEGLDKLQRLVSLNLSHNQLDCIPPTIGTLRYLEFLDLSHNQLDFLPDDICNLRH 274

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
            L  L   +N L Q+P D   ++  + +LDLS N + SLP    F     +  L L   Q
Sbjct: 275 CLVTLHASHNRLTQLP-DQIHNLRKIHVLDLSENKLTSLPAK--FGKTDSVVSLDLSHNQ 331

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L  +   +  L +L  L+ S N L S+PEG  +L SL  LD++ N I  +P ++G L   
Sbjct: 332 L-SSLERLAGLGKLESLNASYNVLTSLPEGVGSLVSLRVLDIAHNEIKEMPAKIGGLR-H 389

Query: 386 LQALRLDGNPLRSIRRTILD 405
           L+ + +  N L ++  T+ D
Sbjct: 390 LKNVDVSHNKLETLPDTLGD 409



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 142/297 (47%), Gaps = 21/297 (7%)

Query: 107 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           Y  E   ++   LD  NN L  +P  IG++ +LR L +T N +R +  S+      + LK
Sbjct: 60  YENEELAMKTKYLDAQNNRLRRVPKGIGRLESLRSLDVTNNTVRAIPGSV------SRLK 113

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
           YL S        EAST +   +      +     ++  G  L  +P  I  +  IT +D 
Sbjct: 114 YLTS-------IEASTNQIKSLPKTIHKASALTTINAAGNKLKTLPKNIGSSSSITYIDA 166

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S NSI+ LP  +    S  ++ +S N+++  P  I     S++ +    N +  +P +G 
Sbjct: 167 SSNSIKTLPKSIYKLHS--SVNVSNNQLRTLPAVIAKGTCSINVIDASRNLIHTLP-EGL 223

Query: 287 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ-LRILDL 344
             +  L  L+LS+N +  +P  P   +L +L+ L L   QL   P DI  L+  L  L  
Sbjct: 224 DKLQRLVSLNLSHNQLDCIP--PTIGTLRYLEFLDLSHNQLDFLPDDICNLRHCLVTLHA 281

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
           S N L  +P+   NL  +  LDLS+N +++LP + G  + S+ +L L  N L S+ R
Sbjct: 282 SHNRLTQLPDQIHNLRKIHVLDLSENKLTSLPAKFGKTD-SVVSLDLSHNQLSSLER 337



 Score = 45.8 bits (107), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 58/115 (50%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N+L  L N+ I     L  L AS N +  +P  +  L R+  L+L  N I +
Sbjct: 627 LTTLDLSANQLPELPNDRIDILASLLVLNASGNQVTAIPMDMPYLYRIQVLNLSANVIKA 686

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 115
           +P  I    SL    + +N L  +P  + KL  + ++D+ +N+L+ +     +LR
Sbjct: 687 LPGDIWRMKSLTTLDLSDNMLEGIPETITKLPSIKSVDISNNKLRSFPKTMERLR 741


>gi|307211084|gb|EFN87327.1| Leucine-rich repeat protein SHOC-2 [Harpegnathos saltator]
          Length = 506

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 182/394 (46%), Gaps = 49/394 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--C 108
           LDL +  I  +PS++     L EFY+  N L +LP+++G L+ L TL L+ N L      
Sbjct: 30  LDLSKASITHLPSTVRDLTHLKEFYLYGNKLVSLPSQIGCLTNLETLALNENSLTSLPNT 89

Query: 109 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
           +E  + RL VLDL +N L+ +P  + K+ +L  L L  N ++ +  ++ N    A L   
Sbjct: 90  LENLK-RLRVLDLRHNKLNEIPDVVYKLKSLVTLFLRFNRIKYVSDNIRNLTNLATLS-- 146

Query: 169 RSRLPENEDSEASTTKEDLITMATRLSVTSKE----------------LSLEGMNLSAIP 212
              L EN+  E  +   D + + T   V+                   L L+  +L  IP
Sbjct: 147 ---LRENKIKELPSGIGDFLNLHT-FDVSHNHLDHLPEEIGKCVQLSTLDLQHNDLLDIP 202

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
             I     + +L L  N++  +P  LS+C  +    +  N +   PD +L+SLS+L+ + 
Sbjct: 203 DSIGNLVLLMRLGLRYNALTSIPESLSNCKLMDEFSVEGNHVSQVPDGLLSSLSNLTTIT 262

Query: 273 LDNNPLRQVPSDG---FKDIPML-----QILDLSYNIASLPE--------NPPFSSLP-- 314
           L  N     PS G   F +I  +     QI  + Y I S  +        +   ++LP  
Sbjct: 263 LSRNNFTSYPSGGPSQFTNIYSISMEQNQIDKIPYGIFSRAKKLTKLNMRDNQLTALPLD 322

Query: 315 -----HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
                ++ EL L   QL + P DI  LQ L +L LS N L+ +     NL  L  LDL +
Sbjct: 323 IGTWVNMVELNLGTNQLTKIPDDIQFLQNLEVLILSNNLLKRLSASIANLRKLRVLDLEE 382

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           N + +LP E+G L   LQ L L  N L S+ R I
Sbjct: 383 NRLESLPNEIGFLR-ELQQLVLQSNQLTSLPRAI 415



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 211/462 (45%), Gaps = 51/462 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +  + GNKL  L +  I   T L  L  ++N L  +P T+ +L RL  LDL  N++  
Sbjct: 50  LKEFYLYGNKLVSLPSQ-IGCLTNLETLALNENSLTSLPNTLENLKRLRVLDLRHNKLNE 108

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVL 119
           IP  +    SL   ++  N +  +   +  L+ L TL L  N++KE        L L   
Sbjct: 109 IPDVVYKLKSLVTLFLRFNRIKYVSDNIRNLTNLATLSLRENKIKELPSGIGDFLNLHTF 168

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR------LP 173
           D+S+N L  LP EIGK   L  L L  N L  +  S+ N     LL  L  R      +P
Sbjct: 169 DVSHNHLDHLPEEIGKCVQLSTLDLQHNDLLDIPDSIGN---LVLLMRLGLRYNALTSIP 225

Query: 174 EN------------EDSEASTTKEDLITMATRLSVTS--------------------KEL 201
           E+            E +  S   + L++  + L+  +                      +
Sbjct: 226 ESLSNCKLMDEFSVEGNHVSQVPDGLLSSLSNLTTITLSRNNFTSYPSGGPSQFTNIYSI 285

Query: 202 SLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           S+E   +  IP  I+  A ++TKL++  N +  LP ++ +  ++  L L  N++   PD 
Sbjct: 286 SMEQNQIDKIPYGIFSRAKKLTKLNMRDNQLTALPLDIGTWVNMVELNLGTNQLTKIPDD 345

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I   L +L  L L NN L+++ S    ++  L++LDL  N + SLP    F  L  LQ+L
Sbjct: 346 I-QFLQNLEVLILSNNLLKRL-SASIANLRKLRVLDLEENRLESLPNEIGF--LRELQQL 401

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPE 378
            L+  QL   P  I  L  L +  + +N+L  +PE    L +L  L ++DN N+  LP E
Sbjct: 402 VLQSNQLTSLPRAIGHLTNLTVFSVGENNLNYLPEEIGTLENLETLHINDNANLHNLPFE 461

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           L L  P L  + +D  PL  +   I+  G   V+++LK + P
Sbjct: 462 LALC-PKLIFMSIDNCPLSLMPPEIVAGGPAMVIQFLKMQGP 502



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 5/183 (2%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           K L L   +++ +PS + +   + +  L  N +  LP ++    +L+TL L+ N +   P
Sbjct: 28  KLLDLSKASITHLPSTVRDLTHLKEFYLYGNKLVSLPSQIGCLTNLETLALNENSLTSLP 87

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
           +  L +L  L  L L +N L ++P   +K +  L  L L +N I  + +N    +L +L 
Sbjct: 88  NT-LENLKRLRVLDLRHNKLNEIPDVVYK-LKSLVTLFLRFNRIKYVSDN--IRNLTNLA 143

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L LR  +++E P+ I     L   D+S N L  +PE       L+ LDL  N++  +P 
Sbjct: 144 TLSLRENKIKELPSGIGDFLNLHTFDVSHNHLDHLPEEIGKCVQLSTLDLQHNDLLDIPD 203

Query: 378 ELG 380
            +G
Sbjct: 204 SIG 206



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 19/161 (11%)

Query: 13  VLSNNL-------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
           +LSNNL       IA+   L  L   +N L  +P  IG L  L +L L  N++ S+P +I
Sbjct: 356 ILSNNLLKRLSASIANLRKLRVLDLEENRLESLPNEIGFLRELQQLVLQSNQLTSLPRAI 415

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN-QLKEYCVE-ACQLRLSVLDLSN 123
               +L  F +G N L+ LP E+G L  L TL ++ N  L     E A   +L  + + N
Sbjct: 416 GHLTNLTVFSVGENNLNYLPEEIGTLENLETLHINDNANLHNLPFELALCPKLIFMSIDN 475

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164
             LS +PPEI          + G P   ++   + GP  A+
Sbjct: 476 CPLSLMPPEI----------VAGGPAMVIQFLKMQGPYRAM 506



 Score = 38.5 bits (88), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           ++LDLS+ S+  +P   ++LT L E  L  N + +LP ++G L  +L+ L L+ N L S+
Sbjct: 28  KLLDLSKASITHLPSTVRDLTHLKEFYLYGNKLVSLPSQIGCLT-NLETLALNENSLTSL 86

Query: 400 RRTILDRGTKAVLKYLKDKIPE 421
             T+ +     VL    +K+ E
Sbjct: 87  PNTLENLKRLRVLDLRHNKLNE 108


>gi|291232979|ref|XP_002736431.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 1196

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 183/374 (48%), Gaps = 67/374 (17%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           ++L++  +  +P+SISG  +L +  + NN L+ LP EL +L +L  ++L SN+  +  V 
Sbjct: 80  INLNKRSLRKLPTSISGFPNLRKCKLANNYLTFLPTELSELKRLKKIELQSNKFDQMPVP 139

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L +L  L++++N L+ +   I  +  LRKL L+GN L  +                 
Sbjct: 140 IFKLHKLHKLNMADNHLTSINQSITNLKQLRKLNLSGNKLINI----------------- 182

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                           D IT   +L    +EL L    + ++P+ I +  ++T L L +N
Sbjct: 183 ----------------DYITTLLKL----EELHLSNNEIQSLPASIGDMSDLTVLYLDKN 222

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
           ++  LP ++     L+ + +S N+I+ +P   L  L+ ++ L+L NN +  +P D   ++
Sbjct: 223 NLTTLPSDIKKLHQLERIDVSSNQIEIFPPG-LCELNEVTSLRLANNNISLIPPD-IANL 280

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L +LDL YN IA++P  P    L  L EL L   +L   P+DI +L +L+ L LS N 
Sbjct: 281 SELLVLDLEYNQIANIP--PALCDLKQLVELTLNINKLTCIPSDIKKLVRLQTLGLSDNQ 338

Query: 349 LQ-----------------------SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L                        +IP   +NL +L +LDLS+NNIS +P EL L    
Sbjct: 339 LNEIPPALCDMPKLTKLTLDGNGLSAIPSAIRNLRNLQKLDLSNNNISVIPSEL-LHMNQ 397

Query: 386 LQALRLDGNPLRSI 399
           L  LRL  N L+ I
Sbjct: 398 LIELRLGSNQLKCI 411



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 185/398 (46%), Gaps = 53/398 (13%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           + N L  +P  +  L RL +++L  N+   +P  I     L +  M +N L+++   +  
Sbjct: 106 ANNYLTFLPTELSELKRLKKIELQSNKFDQMPVPIFKLHKLHKLNMADNHLTSINQSITN 165

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
           L +L  L+L  N+L         L+L  L LSNN +  LP  IG M+ L  L L  N L 
Sbjct: 166 LKQLRKLNLSGNKLINIDYITTLLKLEELHLSNNEIQSLPASIGDMSDLTVLYLDKNNLT 225

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI--TMATRLSVTSKELSLEGMNL 208
           TL S +              +L + E  + S+ + ++    +     VTS  L L   N+
Sbjct: 226 TLPSDI-------------KKLHQLERIDVSSNQIEIFPPGLCELNEVTS--LRLANNNI 270

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELS---------------SC--------ASLQ 245
           S IP +I    E+  LDL  N I  +PP L                +C          LQ
Sbjct: 271 SLIPPDIANLSELLVLDLEYNQIANIPPALCDLKQLVELTLNINKLTCIPSDIKKLVRLQ 330

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASL 304
           TL LS N++ + P A L  +  L+ L LD N L  +PS   +++  LQ LDLS  NI+ +
Sbjct: 331 TLGLSDNQLNEIPPA-LCDMPKLTKLTLDGNGLSAIPS-AIRNLRNLQKLDLSNNNISVI 388

Query: 305 PENPPFSSLPHLQELYLRRM---QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
           P     S L H+ +L   R+   QL+  P++I  LQQL  LDLS N   S  +   +L  
Sbjct: 389 P-----SELLHMNQLIELRLGSNQLKCIPSEIGNLQQLEKLDLSHNEGISGADSLSSLDE 443

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L+EL L+ NN+ ++P    L    LQ L ++ N ++ I
Sbjct: 444 LSELKLNKNNLRSVPNMFKL--KKLQVLHMNDNLIKEI 479



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 200/423 (47%), Gaps = 67/423 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL++ GNKL  ++ + I +   L EL  S N +  +P +IG +S L  L L +N + +
Sbjct: 169 LRKLNLSGNKL--INIDYITTLLKLEELHLSNNEIQSLPASIGDMSDLTVLYLDKNNLTT 226

Query: 61  IPSSIS--------------------GCCSLAE---FYMGNNALSALPAELGKLSKLGTL 97
           +PS I                     G C L E     + NN +S +P ++  LS+L  L
Sbjct: 227 LPSDIKKLHQLERIDVSSNQIEIFPPGLCELNEVTSLRLANNNISLIPPDIANLSELLVL 286

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL  NQ+       C L+ L  L L+ N L+ +P +I K+  L+ L L+ N L  +  +L
Sbjct: 287 DLEYNQIANIPPALCDLKQLVELTLNINKLTCIPSDIKKLVRLQTLGLSDNQLNEIPPAL 346

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
            + P     K  +  L  N  S   +   +L  +        ++L L   N+S IPSE+ 
Sbjct: 347 CDMP-----KLTKLTLDGNGLSAIPSAIRNLRNL--------QKLDLSNNNISVIPSELL 393

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
              ++ +L L  N ++ +P E+ +   L+ L LS N+     D+ L+SL  LS LKL+ N
Sbjct: 394 HMNQLIELRLGSNQLKCIPSEIGNLQQLEKLDLSHNEGISGADS-LSSLDELSELKLNKN 452

Query: 277 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
            LR VP + FK +  LQ+L ++ N+                        ++E P +I  L
Sbjct: 453 NLRSVP-NMFK-LKKLQVLHMNDNL------------------------IKEIPEEIQNL 486

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
             L+ L L  N L SIP     LT+L EL L  N ++ + P +G L   L+ L L+ N L
Sbjct: 487 YSLKELWLDYNQLTSIPSEIGELTNLRELSLLMNKLTEITPAIGKLS-MLRHLNLEYNKL 545

Query: 397 RSI 399
           +++
Sbjct: 546 KTL 548



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 135/274 (49%), Gaps = 20/274 (7%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           NKLT + ++ I     L  L  S N LN +P  +  + +L +L L  N + +IPS+I   
Sbjct: 314 NKLTCIPSD-IKKLVRLQTLGLSDNQLNEIPPALCDMPKLTKLTLDGNGLSAIPSAIRNL 372

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 127
            +L +  + NN +S +P+EL  +++L  L L SNQLK    E   L+ L  LDLS+N   
Sbjct: 373 RNLQKLDLSNNNISVIPSELLHMNQLIELRLGSNQLKCIPSEIGNLQQLEKLDLSHNEGI 432

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
                +  +  L +L L  N LR++         P + K  + ++    D+      E++
Sbjct: 433 SGADSLSSLDELSELKLNKNNLRSV---------PNMFKLKKLQVLHMNDNLIKEIPEEI 483

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
             +      + KEL L+   L++IPSEI E   + +L L  N + E+ P +   + L+ L
Sbjct: 484 QNL-----YSLKELWLDYNQLTSIPSEIGELTNLRELSLLMNKLTEITPAIGKLSMLRHL 538

Query: 248 ILSRNKIKDWPDAILTSLSSLSC-LKLDNNPLRQ 280
            L  NK+K  P+ +    + + C ++L  NP+ Q
Sbjct: 539 NLEYNKLKTLPEEV---NNLIDCDIRLKGNPMSQ 569



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 28/226 (12%)

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
           T +E++L   +L  +P+ I     + K  L+ N +  LP ELS    L+ + L  NK   
Sbjct: 76  TDEEINLNKRSLRKLPTSISGFPNLRKCKLANNYLTFLPTELSELKRLKKIELQSNKFDQ 135

Query: 257 WPDAI----------------------LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
            P  I                      +T+L  L  L L  N L  +  D    +  L+ 
Sbjct: 136 MPVPIFKLHKLHKLNMADNHLTSINQSITNLKQLRKLNLSGNKLINI--DYITTLLKLEE 193

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           L LS N I SLP       +  L  LYL +  L   P+DI +L QL  +D+S N ++  P
Sbjct: 194 LHLSNNEIQSLP--ASIGDMSDLTVLYLDKNNLTTLPSDIKKLHQLERIDVSSNQIEIFP 251

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            G   L  +T L L++NNIS +PP++  L   L  L L+ N + +I
Sbjct: 252 PGLCELNEVTSLRLANNNISLIPPDIANLS-ELLVLDLEYNQIANI 296



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 118/301 (39%), Gaps = 73/301 (24%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           NL+  +PE I +L  L  L L  N++ SIPS I    +L E  +  N L+ +   +GKLS
Sbjct: 474 NLIKEIPEEIQNLYSLKELWLDYNQLTSIPSEIGELTNLRELSLLMNKLTEITPAIGKLS 533

Query: 93  KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
            L  L+L  N+LK                       LP E+  +     + L GNP    
Sbjct: 534 MLRHLNLEYNKLK----------------------TLPEEVNNLIDC-DIRLKGNP---- 566

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
                              + ++ D E+S  KED   +  R S   +   L G    +IP
Sbjct: 567 -------------------MSQDLDKESSYHKEDTKVVRIRRSQEYQSHKLPGGYFISIP 607

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
               +      +D+    +++L PEL    ++++ ++   K+      +L S   + C  
Sbjct: 608 PRAVQ----NDVDIKVQVVEDLQPELMDYPTMESNVI---KLSGETQVLLNSAVKVGC-- 658

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP------------FSSLPHLQELY 320
                 +   +DG +D  +L+  D+   + S  E+              F+S PH + LY
Sbjct: 659 ------QCKSADGLRDFALLKKEDVWTTLKSTREDQTVSTEVTDLGMFVFASRPHTEVLY 712

Query: 321 L 321
           +
Sbjct: 713 V 713


>gi|350417075|ref|XP_003491244.1| PREDICTED: protein lap4-like isoform 2 [Bombus impatiens]
          Length = 1759

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 181/389 (46%), Gaps = 43/389 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL+   N +  +P+    L +L +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +  L  L   D  SN +        QLR L+VL L++ SL+ LPP+ G +  L+ L 
Sbjct: 99  PENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L++L  SL       L K  R  L +N                            
Sbjct: 159 LRENLLKSLPESLSQ-----LYKLERLDLGDN---------------------------- 185

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
              ++  +P+ I +   + +L L  N +Q LPPE+    +L  L +S N+++D P+ I  
Sbjct: 186 ---DIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEI-G 241

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
            L SL+ L L  N + ++P DG  ++  L IL +  N +++L  N       +LQEL L 
Sbjct: 242 GLESLTDLHLSQNVIEKLP-DGLGELQKLTILKVDQNRLSTLNSN--IGRCENLQELILT 298

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
              L E P  I +L  L  L++ +NSLQS+P    NL  L  L L DN +  LP E+G  
Sbjct: 299 ENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQC 358

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAV 411
             +L  L + GN L+ +  ++++   KAV
Sbjct: 359 T-ALHVLDVSGNRLQYLPYSLINLNLKAV 386



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 5/192 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S + +EL L+  ++  +P   +   ++ KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRSLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D P+ I  +L +L      +NP+ ++P+ GF  +  L +L L+  ++ +LP  P F 
Sbjct: 94  DIPDIPENI-KNLRALQVADFSSNPIPRLPA-GFVQLRNLTVLGLNDMSLTNLP--PDFG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  LQ L LR   L+  P  + +L +L  LDL  N ++ +P     L +L EL L  N 
Sbjct: 150 SLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQ 209

Query: 372 ISALPPELGLLE 383
           +  LPPE+G L+
Sbjct: 210 LQHLPPEIGELK 221



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 151/342 (44%), Gaps = 40/342 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +PE I +L  L   D   N I  +P+      +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LP + G L  L +L+L  N LK       QL +L  LDL +N +  LP  IGK+ 
Sbjct: 139 MSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L++L L  N L+ L   +    T A L    +RL            EDL      L   
Sbjct: 199 ALQELWLDHNQLQHLPPEIGELKTLACLDVSENRL------------EDLPEEIGGLESL 246

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           + +L L    +  +P  + E  ++T L + +N +  L   +  C +LQ LIL+ N + + 
Sbjct: 247 T-DLHLSQNVIEKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLEL 305

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P   +  L +L+ L +D N L+ +P++                           +L  L 
Sbjct: 306 P-VTIGKLHNLNNLNVDRNSLQSLPTE-------------------------IGNLKQLG 339

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            L LR  +L+  P ++ +   L +LD+S N LQ +P    NL
Sbjct: 340 VLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINL 381



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L V+ N+L+ L++N I     L ELI ++N L  +P TIG L  L  L++ +N + S+P+
Sbjct: 272 LKVDQNRLSTLNSN-IGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPT 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I     L    + +N L  LP E+G+ + L  LD+  N+L+        L L  + LS 
Sbjct: 331 EIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINLNLKAVWLSK 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|440804214|gb|ELR25091.1| Leucinerich repeat protein lrrA, putative [Acanthamoeba castellanii
           str. Neff]
          Length = 507

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 127/411 (30%), Positives = 182/411 (44%), Gaps = 49/411 (11%)

Query: 24  MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +L +L  S N L  +P  +G LS L  LD+  N +   P       +L  F   NN L A
Sbjct: 111 LLQKLDLSGNQLEELPAELGQLSALQYLDISGNNLQVFPPEFGNLRALLIFKAENNRLRA 170

Query: 84  LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 142
           L  E+G L++L    L +N L     +   LR L V DLSNN L  LP E+G +  LR  
Sbjct: 171 LAPEVGNLTELSEWYLANNALSRLPPQIGNLRNLQVFDLSNNKLQDLPAEMGYLARLRSF 230

Query: 143 LLTGN-------PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL-------- 187
            +  N       PL  L      G    L   L   LPE+  +  S  + DL        
Sbjct: 231 SVNENSNLKTLFPLEQLNQLQYMG----LRNTLLDELPEDLCTLPSIVELDLRNNLQIGR 286

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS--IQELPPELSSCASLQ 245
           I        T + L L G  L+ +P+EI     +  LDL +NS  I+ +PPEL     L+
Sbjct: 287 IPPEIGRLTTLRRLDLFGNKLTNLPAEIGNLVNLELLDLRQNSLAIELIPPELGRLTRLE 346

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 305
            L++S+N +   P  I T + +L  L   NN L  VP +                     
Sbjct: 347 RLLMSKNNLATLPAEIKT-MYALKELDAANNVLLSVPEE--------------------- 384

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
                  L +LQ+L +   +L   P  I  L  L  LD+  N +  +P     L+S+ ++
Sbjct: 385 ----IGCLSNLQKLNVSGNRLLTLPPTIALLTALTKLDIKGNEIHELPSEVGELSSVVKI 440

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
           D+S N ++ LP ELG L P L+ + +  NPL      +L+RGT AVL +L+
Sbjct: 441 DMSHNMMTNLPWELGSL-PKLEVMDISHNPLVIPPPDVLNRGTPAVLAWLR 490



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 133/319 (41%), Gaps = 58/319 (18%)

Query: 97  LDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           +DL    + E      QL+   L L+ N ++ LP E+GK+  +  L L  N         
Sbjct: 20  VDLRKQGIPEIPKSVRQLQCRELILAENDITSLPDELGKLARIEVLDLGNN--------R 71

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS------------KELSLE 204
           +N   PAL              + + T  +L     +L  T+            ++L L 
Sbjct: 72  INHVPPAL-------------GDLAPTLRELWLCNNKLFFTAPLTPNLGKLRLLQKLDLS 118

Query: 205 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 264
           G  L  +P+E+ +   +  LD+S N++Q  PPE  +  +L       N+++     +  +
Sbjct: 119 GNQLEELPAELGQLSALQYLDISGNNLQVFPPEFGNLRALLIFKAENNRLRALAPEV-GN 177

Query: 265 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP---------------ENP 308
           L+ LS   L NN L ++P     ++  LQ+ DLS N +  LP               EN 
Sbjct: 178 LTELSEWYLANNALSRLPPQ-IGNLRNLQVFDLSNNKLQDLPAEMGYLARLRSFSVNENS 236

Query: 309 ------PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN-SLQSIPEGFKNLTS 361
                 P   L  LQ + LR   L E P D+  L  +  LDL  N  +  IP     LT+
Sbjct: 237 NLKTLFPLEQLNQLQYMGLRNTLLDELPEDLCTLPSIVELDLRNNLQIGRIPPEIGRLTT 296

Query: 362 LTELDLSDNNISALPPELG 380
           L  LDL  N ++ LP E+G
Sbjct: 297 LRRLDLFGNKLTNLPAEIG 315



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 22/152 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I +   L EL A+ N+L  +PE IG LS L +L++  NR+L++P +I+   +L +  +  
Sbjct: 362 IKTMYALKELDAANNVLLSVPEEIGCLSNLQKLNVSGNRLLTLPPTIALLTALTKLDIKG 421

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N +  LP+E+G+LS +                        +D+S+N ++ LP E+G +  
Sbjct: 422 NEIHELPSEVGELSSVVK----------------------IDMSHNMMTNLPWELGSLPK 459

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 170
           L  + ++ NPL      ++N  TPA+L +LR 
Sbjct: 460 LEVMDISHNPLVIPPPDVLNRGTPAVLAWLRK 491



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 120/250 (48%), Gaps = 25/250 (10%)

Query: 25  LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           + EL    NL  G +P  IG L+ L RLDL  N++ ++P+ I    +L    +  N+L+ 
Sbjct: 273 IVELDLRNNLQIGRIPPEIGRLTTLRRLDLFGNKLTNLPAEIGNLVNLELLDLRQNSLAI 332

Query: 84  --LPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 140
             +P ELG+L++L  L +  N L     E      L  LD +NN L  +P EIG ++ L+
Sbjct: 333 ELIPPELGRLTRLERLLMSKNNLATLPAEIKTMYALKELDAANNVLLSVPEEIGCLSNLQ 392

Query: 141 KLLLTGNPLRTLRSSLVNGPTPALLKYL-RSRLPENEDSEASTTKEDLITMATRLSVTSK 199
           KL ++GN L TL       PT ALL  L +  +  NE  E  +   +L       SV   
Sbjct: 393 KLNVSGNRLLTL------PPTIALLTALTKLDIKGNEIHELPSEVGELS------SVVKI 440

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKL---DLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
           ++S   M  + +P   WE G + KL   D+S N +   PP++ +  +   L   R   K 
Sbjct: 441 DMSHNMM--TNLP---WELGSLPKLEVMDISHNPLVIPPPDVLNRGTPAVLAWLRKNEKT 495

Query: 257 WPDAILTSLS 266
             +  +T LS
Sbjct: 496 GRNKHVTGLS 505



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 11/190 (5%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA-SLQTLILSRNKIKDW 257
           +EL L   +++++P E+ +   I  LDL  N I  +PP L   A +L+ L L  NK+  +
Sbjct: 40  RELILAENDITSLPDELGKLARIEVLDLGNNRINHVPPALGDLAPTLRELWLCNNKL--F 97

Query: 258 PDAILT----SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFSS 312
             A LT     L  L  L L  N L ++P++    +  LQ LD+S  N+   P  P F +
Sbjct: 98  FTAPLTPNLGKLRLLQKLDLSGNQLEELPAE-LGQLSALQYLDISGNNLQVFP--PEFGN 154

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  L        +LR    ++  L +L    L+ N+L  +P    NL +L   DLS+N +
Sbjct: 155 LRALLIFKAENNRLRALAPEVGNLTELSEWYLANNALSRLPPQIGNLRNLQVFDLSNNKL 214

Query: 373 SALPPELGLL 382
             LP E+G L
Sbjct: 215 QDLPAEMGYL 224



 Score = 44.7 bits (104), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           LR+  + E P  + +LQ  R L L++N + S+P+    L  +  LDL +N I+ +PP LG
Sbjct: 22  LRKQGIPEIPKSVRQLQ-CRELILAENDITSLPDELGKLARIEVLDLGNNRINHVPPALG 80

Query: 381 LLEPSLQALRLDGNPL 396
            L P+L+ L L  N L
Sbjct: 81  DLAPTLRELWLCNNKL 96


>gi|355719293|gb|AES06552.1| soc-2 suppressor of clear-like protein [Mustela putorius furo]
          Length = 582

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 194/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  ++N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALNENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  S+ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 283 --------------LSSLSR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISALPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL L+ N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPRSL 303



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 150/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +SALP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534


>gi|73998572|ref|XP_535013.2| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Canis
           lupus familiaris]
 gi|301755536|ref|XP_002913604.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Ailuropoda
           melanoleuca]
 gi|410976089|ref|XP_003994458.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Felis
           catus]
 gi|281347753|gb|EFB23337.1| hypothetical protein PANDA_001424 [Ailuropoda melanoleuca]
          Length = 582

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 194/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  ++N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALNENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  S+ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 283 --------------LSSLSR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISALPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL L+ N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPRSL 303



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 150/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +SALP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534


>gi|363737250|ref|XP_422802.3| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like [Gallus gallus]
          Length = 579

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 189/410 (46%), Gaps = 57/410 (13%)

Query: 41  TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY-MGNNALSALPAELGKLSKLGTLDL 99
            I SL  L +L L+Q  +  IP  I     L E   + +N L  LP E+  L KL  + L
Sbjct: 135 VISSLQSLHQLRLYQINLYEIPVQICKYLHLIELLGLSDNNLQCLPKEIVNLKKLKEIYL 194

Query: 100 HSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
            +N+ + + +E  ++  L ++DL  N +S +P EIG +T L KL L  N L ++  +L +
Sbjct: 195 RNNRFENFPIELSKIVSLEIIDLEQNLISHIPEEIGSLTNLVKLFLASNKLSSIPPTLRH 254

Query: 159 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 218
               A+L      L  N   +     ++L           +EL L G +L   P++    
Sbjct: 255 CQKLAVLD-----LSHNPLHKLPPVLKNL--------TGKRELGLSGNSLEEPPAQTGSW 301

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
             +T + L    + ++    +   S++ L LS N   + P  I  S+ +L  L LD+N +
Sbjct: 302 ASLTHVYLRNTGLHKVHRSFTRLTSIRVLDLSENCFDEIPKGI-CSMKNLEILNLDDNQI 360

Query: 279 RQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP-------HLQELYL---RRMQLRE 328
           +++P++  +++  L+ L LS N         F+S P        L++LYL   + ++L  
Sbjct: 361 QEIPAE-IQELTNLKCLSLSQN--------QFNSFPMEILLVESLEKLYLGQNKGIKLTS 411

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE----- 383
            P DI++LQ L+ L +  N L+ +P    +LT L  LD  +N +  LP  LG ++     
Sbjct: 412 LPEDIIKLQNLKELHIENNGLERLPPAVGSLTHLKVLDCHNNLLKKLPESLGQIQGLQKL 471

Query: 384 -----------------PSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
                              LQ + +DGNP+      +   GT A+L+YL+
Sbjct: 472 LVQNNQLSRLSERLGSLKQLQVVLVDGNPMTDPPIEVCRHGTTAILQYLQ 521



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 170/364 (46%), Gaps = 26/364 (7%)

Query: 47  RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 106
           R+  +DL    + +I + +     L E ++  N +  +P E+  L  +  L L  N +++
Sbjct: 48  RIFFIDLANKHLKTISAEVFRLEDLEELHVEKNLIVNIPKEIKLLKNMKVLYLDHNHIRD 107

Query: 107 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
            C E   L+ +  LDLSNN LS     +  +++L+ L    + LR  + +L   P   + 
Sbjct: 108 VCEELGMLKNILSLDLSNNPLSY--SSLLVISSLQSL----HQLRLYQINLYEIPV-QIC 160

Query: 166 KYLR-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
           KYL    L    D+      ++++ +        KE+ L        P E+ +   +  +
Sbjct: 161 KYLHLIELLGLSDNNLQCLPKEIVNLKKL-----KEIYLRNNRFENFPIELSKIVSLEII 215

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           DL +N I  +P E+ S  +L  L L+ NK+   P   L     L+ L L +NPL ++P  
Sbjct: 216 DLEQNLISHIPEEIGSLTNLVKLFLASNKLSSIPPT-LRHCQKLAVLDLSHNPLHKLPP- 273

Query: 285 GFKDIPMLQILDLSYNIASLPENPP----FSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
             K++   + L LS N  SL E P     ++SL H+   YLR   L +      RL  +R
Sbjct: 274 VLKNLTGKRELGLSGN--SLEEPPAQTGSWASLTHV---YLRNTGLHKVHRSFTRLTSIR 328

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIR 400
           +LDLS+N    IP+G  ++ +L  L+L DN I  +P E+  L  +L+ L L  N   S  
Sbjct: 329 VLDLSENCFDEIPKGICSMKNLEILNLDDNQIQEIPAEIQEL-TNLKCLSLSQNQFNSFP 387

Query: 401 RTIL 404
             IL
Sbjct: 388 MEIL 391



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 163/376 (43%), Gaps = 49/376 (13%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL   KNL+  +P+ I  L  +  L L  N I  +   +    ++    + NN LS  
Sbjct: 72  LEELHVEKNLIVNIPKEIKLLKNMKVLYLDHNHIRDVCEELGMLKNILSLDLSNNPLSYS 131

Query: 85  PA-ELGKLSKLGTLDLHSNQLKEYCVEACQLR--LSVLDLSNNSLSGLPPEIGKMTTLRK 141
               +  L  L  L L+   L E  V+ C+    + +L LS+N+L  LP EI  +  L++
Sbjct: 132 SLLVISSLQSLHQLRLYQINLYEIPVQICKYLHLIELLGLSDNNLQCLPKEIVNLKKLKE 191

Query: 142 LLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           + L  N         S +V+     L + L S +PE   S  +  K              
Sbjct: 192 IYLRNNRFENFPIELSKIVSLEIIDLEQNLISHIPEEIGSLTNLVK-------------- 237

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
             L L    LS+IP  +    ++  LDLS N + +LPP L +    + L LS N +++ P
Sbjct: 238 --LFLASNKLSSIPPTLRHCQKLAVLDLSHNPLHKLPPVLKNLTGKRELGLSGNSLEE-P 294

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 318
            A   S +SL+ + L N  L +V    F  +  +++LDLS N                  
Sbjct: 295 PAQTGSWASLTHVYLRNTGLHKV-HRSFTRLTSIRVLDLSENC----------------- 336

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
                    E P  I  ++ L IL+L  N +Q IP   + LT+L  L LS N  ++ P E
Sbjct: 337 -------FDEIPKGICSMKNLEILNLDDNQIQEIPAEIQELTNLKCLSLSQNQFNSFPME 389

Query: 379 LGLLEPSLQALRLDGN 394
           + L+E SL+ L L  N
Sbjct: 390 ILLVE-SLEKLYLGQN 404



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 1/107 (0%)

Query: 7   EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 66
           +G KLT L  ++I     L EL    N L  +P  +GSL+ L  LD H N +  +P S+ 
Sbjct: 405 KGIKLTSLPEDIIKLQN-LKELHIENNGLERLPPAVGSLTHLKVLDCHNNLLKKLPESLG 463

Query: 67  GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 113
               L +  + NN LS L   LG L +L  + +  N + +  +E C+
Sbjct: 464 QIQGLQKLLVQNNQLSRLSERLGSLKQLQVVLVDGNPMTDPPIEVCR 510


>gi|298244934|ref|ZP_06968740.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297552415|gb|EFH86280.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 353

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/334 (32%), Positives = 160/334 (47%), Gaps = 40/334 (11%)

Query: 47  RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 106
           R+IRL L +  +  IPS +    SL   Y+ NN L  LP ++ +LS L  LDL +NQL  
Sbjct: 51  RVIRLHLCECNLTQIPSEVWQFSSLKNLYLTNNQLRTLPEQVSRLSSLQWLDLENNQLNS 110

Query: 107 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
              +   LR L VLDL+NN LS LP EIG +++L  L L  N L TL   + N      L
Sbjct: 111 LPEQVRNLRDLQVLDLANNQLSSLPGEIGNLSSLDSLYLGDNQLSTLPEQMENLRN---L 167

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
           ++L   L  N+ +      ++L ++ +        L+L+    S++P ++W    +  L 
Sbjct: 168 QFL--HLSNNQLNTLPAKIDNLASLQS--------LALDNNQFSSLPGQVWNLRNLQFLA 217

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           L  N +  LP E+ + + L +L L  +     P  +  +LS L  L L  N L  +P++ 
Sbjct: 218 LGNNQLNSLPAEIGNLSELSSLHLRNSHFSSLPRQVW-NLSKLRHLGLTLNQLSSLPAE- 275

Query: 286 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
             ++  LQ LDLS        N  FSSL                P +I  L  LR L+LS
Sbjct: 276 IGNLSELQWLDLS--------NNQFSSL----------------PAEISNLSSLRWLNLS 311

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            N   S+P+   NL+SL  L+L DN    L  EL
Sbjct: 312 NNQFSSLPKEISNLSSLQWLNLGDNLSQTLEAEL 345



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 138/285 (48%), Gaps = 16/285 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +  ++ L  L  + N L  +PE +  LS L  LDL  N++ S+P  +     L    + N
Sbjct: 69  VWQFSSLKNLYLTNNQLRTLPEQVSRLSSLQWLDLENNQLNSLPEQVRNLRDLQVLDLAN 128

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N LS+LP E+G LS L +L L  NQL     +   LR L  L LSNN L+ LP +I  + 
Sbjct: 129 NQLSSLPGEIGNLSSLDSLYLGDNQLSTLPEQMENLRNLQFLHLSNNQLNTLPAKIDNLA 188

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +L+ L L  N   +L   + N      L      L  N+ +       +L  +++     
Sbjct: 189 SLQSLALDNNQFSSLPGQVWNLRNLQFLA-----LGNNQLNSLPAEIGNLSELSS----- 238

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L L   + S++P ++W   ++  L L+ N +  LP E+ + + LQ L LS N+    
Sbjct: 239 ---LHLRNSHFSSLPRQVWNLSKLRHLGLTLNQLSSLPAEIGNLSELQWLDLSNNQFSSL 295

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           P A +++LSSL  L L NN    +P +   ++  LQ L+L  N++
Sbjct: 296 P-AEISNLSSLRWLNLSNNQFSSLPKE-ISNLSSLQWLNLGDNLS 338



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 159/332 (47%), Gaps = 40/332 (12%)

Query: 99  LHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
           +HS   ++ C      R+  L L   +L+ +P E+ + ++L+ L LT N LRTL      
Sbjct: 35  VHSWMREKQCQYDKYGRVIRLHLCECNLTQIPSEVWQFSSLKNLYLTNNQLRTL------ 88

Query: 159 GPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 217
              P  +  L S +  + E+++ ++  E +  +   L V    L L    LS++P EI  
Sbjct: 89  ---PEQVSRLSSLQWLDLENNQLNSLPEQVRNLRD-LQV----LDLANNQLSSLPGEIGN 140

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              +  L L  N +  LP ++ +  +LQ L LS N++   P A + +L+SL  L LDNN 
Sbjct: 141 LSSLDSLYLGDNQLSTLPEQMENLRNLQFLHLSNNQLNTLP-AKIDNLASLQSLALDNNQ 199

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLP--------------ENPPFSSLPH------- 315
              +P   + ++  LQ L L  N + SLP               N  FSSLP        
Sbjct: 200 FSSLPGQVW-NLRNLQFLALGNNQLNSLPAEIGNLSELSSLHLRNSHFSSLPRQVWNLSK 258

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           L+ L L   QL   P +I  L +L+ LDLS N   S+P    NL+SL  L+LS+N  S+L
Sbjct: 259 LRHLGLTLNQLSSLPAEIGNLSELQWLDLSNNQFSSLPAEISNLSSLRWLNLSNNQFSSL 318

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
           P E+  L  SLQ L L  N  +++   ++  G
Sbjct: 319 PKEISNL-SSLQWLNLGDNLSQTLEAELIAHG 349


>gi|55728731|emb|CAH91105.1| hypothetical protein [Pongo abelii]
          Length = 582

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 194/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  S+ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 283 --------------LSSLSR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLGKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  +Q L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DIQKLVLTNNQLTTLPRGI 490



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPRSL 303



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 77/150 (51%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L +L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLGKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ +  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDIQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 149/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLGKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               +Q L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDIQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534


>gi|397493669|ref|XP_003817723.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Pan paniscus]
          Length = 573

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 179/415 (43%), Gaps = 62/415 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN L  L    I + T L E+   +N     P+ +  L  L  +DL +N+I +IP 
Sbjct: 160 LGLTGNHLKCLPKE-IVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPE 218

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L +FYM +N L  LPA L + S+L  LDL  N L        +LR ++ + LS
Sbjct: 219 EIGHLTGLQKFYMASNNLPVLPASLCQCSQLSVLDLSHNLLHSIPKSLAELRKMTEIGLS 278

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L  +P  I + T+L  L L    L  LR S                           
Sbjct: 279 GNRLEKVPRLICRWTSLHLLYLGNTGLHRLRGSF-------------------------- 312

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                     R  V  + L L   +L   P +I     +  L L  N I +LP EL S +
Sbjct: 313 ----------RCLVNLRFLDLSQNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLS 362

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
            L+ L L+ N+   +P+ +L SL+SL  L +  +        GFK         L+Y   
Sbjct: 363 KLKILGLTGNEFLSFPEEVL-SLASLEKLYIGQD-------QGFK---------LTY--- 402

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
            +PE+     L  L+ELY+    L   P  +  +  L +LD   N L+ +P+      +L
Sbjct: 403 -VPEH--IRKLQSLKELYIENNHLEYLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQAL 459

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
            EL L DN ++ LP  L  L  +L+ L L  NP+    + +   G +A+ KYLK+
Sbjct: 460 KELRLEDNLLTHLPENLDSL-VNLKVLTLMDNPMEEPPKEVCAEGNEAIWKYLKE 513



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 48/212 (22%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA------- 260
           L+AIP EI+   E+ ++ L  N I+E+P E+    +++ L L +N ++    A       
Sbjct: 50  LTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPALGLLSSL 109

Query: 261 ----------------ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL 304
                           +++ L +L  L+L    L+++P    K++  L++L L+ N    
Sbjct: 110 ESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVVCKNLHHLELLGLTGN---- 165

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
                                L+  P +I+   +LR + L +N  +  P+    L +L  
Sbjct: 166 --------------------HLKCLPKEIVNQTKLREIYLKRNQFEVFPQELCVLYTLEI 205

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           +DL +N I A+P E+G L   LQ   +  N L
Sbjct: 206 IDLDENKIGAIPEEIGHL-TGLQKFYMASNNL 236


>gi|402881488|ref|XP_003904303.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Papio anubis]
          Length = 582

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 193/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-L 238
                         LS  S+ L L    LSAIP  + +   + +L+L  N+I  LP   L
Sbjct: 283 --------------LSSLSR-LGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           N   L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NFRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPRSL 303



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 77/150 (51%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG   KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNFRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 149/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S+S C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNFRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534


>gi|410037727|ref|XP_516869.3| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Pan troglodytes]
          Length = 573

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 179/415 (43%), Gaps = 62/415 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN L  L    I + T L E+   +N     P+ +  L  L  +DL +N+I +IP 
Sbjct: 160 LGLTGNHLKCLPKE-IVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPE 218

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L +FYM +N L  LPA L + S+L  LDL  N L        +LR ++ + LS
Sbjct: 219 EIGHLTGLQKFYMASNNLPVLPASLCQCSQLSVLDLSHNLLHSIPKSLAELRKMTEIGLS 278

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L  +P  I + T+L  L L    L  LR S                           
Sbjct: 279 GNRLEKVPRLICRWTSLHLLYLGNTGLHRLRGSF-------------------------- 312

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                     R  V  + L L   +L   P +I     +  L L  N I +LP EL S +
Sbjct: 313 ----------RCLVNLRFLDLSQNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLS 362

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
            L+ L L+ N+   +P+ +L SL+SL  L +  +        GFK         L+Y   
Sbjct: 363 KLKILGLTGNEFLSFPEEVL-SLASLEKLYIGQD-------QGFK---------LTY--- 402

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
            +PE+     L  L+ELY+    L   P  +  +  L +LD   N L+ +P+      +L
Sbjct: 403 -VPEH--IRKLQSLKELYIENNHLEYLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQAL 459

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
            EL L DN ++ LP  L  L  +L+ L L  NP+    + +   G +A+ KYLK+
Sbjct: 460 KELRLEDNLLTHLPENLDSL-VNLKVLTLMDNPMEEPPKEVCAEGNEAIWKYLKE 513



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 48/212 (22%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA------- 260
           L+AIP EI+   E+ ++ L  N I+E+P E+    +++ L L +N ++    A       
Sbjct: 50  LTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPALGLLSSL 109

Query: 261 ----------------ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL 304
                           +++ L +L  L+L    L+++P    K++  L++L L+ N    
Sbjct: 110 ESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVICKNLHHLELLGLTGN---- 165

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
                                L+  P +I+   +LR + L +N  +  P+    L +L  
Sbjct: 166 --------------------HLKCLPKEIVNQTKLREIYLKRNQFEVFPQELCVLYTLEI 205

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           +DL +N I A+P E+G L   LQ   +  N L
Sbjct: 206 IDLDENKIGAIPEEIGHL-TGLQKFYMASNNL 236


>gi|209156068|gb|ACI34266.1| Leucine-rich repeat-containing protein 40 [Salmo salar]
          Length = 447

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 187/378 (49%), Gaps = 43/378 (11%)

Query: 70  SLAEFYMGNNALSALPAELGKLS-KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS- 127
           S A F       +A+P  L K + K G L+L    L E      +L L   + +  +LS 
Sbjct: 12  SRAGFRTEKEEPAAVPYGLLKTARKSGQLNLSGRGLTEVPQSVWRLNLDTPEEAKQNLSF 71

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
           G        T L KLLL  N L  L   +   P   +L      + +N+ +   T+  +L
Sbjct: 72  GADDRWWDQTDLTKLLLPSNKLEALSEDVKLLPALTVLD-----VHDNQLTSLPTSIGEL 126

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
             +        ++LSL    L  +P E+W    +T L L +N ++ LP  +    +L  +
Sbjct: 127 QHL--------QKLSLSHNKLKELPKEVWSLKNLTCLQLQQNLLEHLPEGVGLLTNLDDI 178

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            LS N++   PD+ L +L+ L  L L +N L+ +PS G   +  L++LD ++N + S+P 
Sbjct: 179 DLSNNQLTAVPDS-LGNLNHLVKLNLSHNKLKSLPS-GISVMKNLRLLDCTHNQLESIP- 235

Query: 307 NPPFSSLPHLQELYLRRMQLREAP----------------TDILRLQQLR------ILDL 344
            P  S +  L++LYLR  +LR  P                 ++L  + L+      +L+L
Sbjct: 236 -PVLSQMASLEQLYLRHNKLRFLPELPSSRLKELHVGNNQIEVLEAEHLKHLSTLSVLEL 294

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
             N ++++PE  + L  L  LDL +N+IS+LP  L LL P L+ L L+GNPLR IRR +L
Sbjct: 295 RDNKVKTLPEEIELLQGLERLDLVNNDISSLPAALALL-PKLKILTLEGNPLRGIRRDLL 353

Query: 405 DRGTKAVLKYLKDKIPEN 422
            +GT  +LKYL+ +I E+
Sbjct: 354 TKGTNELLKYLRGRIKED 371



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 129/273 (47%), Gaps = 34/273 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  +D+  N+LT + ++L  +   L +L  S N L  +P  I  +  L  LD   N++ S
Sbjct: 175 LDDIDLSNNQLTAVPDSL-GNLNHLVKLNLSHNKLKSLPSGISVMKNLRLLDCTHNQLES 233

Query: 61  IPSSISGCCSLAEFYM---------------------GNNALSALPAE-LGKLSKLGTLD 98
           IP  +S   SL + Y+                     GNN +  L AE L  LS L  L+
Sbjct: 234 IPPVLSQMASLEQLYLRHNKLRFLPELPSSRLKELHVGNNQIEVLEAEHLKHLSTLSVLE 293

Query: 99  LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
           L  N++K    E   L+ L  LDL NN +S LP  +  +  L+ L L GNPLR +R  L+
Sbjct: 294 LRDNKVKTLPEEIELLQGLERLDLVNNDISSLPAALALLPKLKILTLEGNPLRGIRRDLL 353

Query: 158 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV------TSKELSLEGMNLSAI 211
              T  LLKYLR R+ E+ D +     +  +T+ ++  +      T K L      ++ +
Sbjct: 354 TKGTNELLKYLRGRIKEDPDGKGDEP-DTAMTLPSQAKINVHTIKTLKILDYSEKQMACV 412

Query: 212 PSEIWEA---GEITKLDLSRNSIQELPPELSSC 241
           P ++++A     +  ++ S+N +  +PP   +C
Sbjct: 413 PDDVFDAVGSEPVASVNFSKNQLAAVPPRYLAC 445



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 167/373 (44%), Gaps = 31/373 (8%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T LT+L+   N L  + E +  L  L  LD+H N++ S+P+SI     L +  + +N L 
Sbjct: 81  TDLTKLLLPSNKLEALSEDVKLLPALTVLDVHDNQLTSLPTSIGELQHLQKLSLSHNKLK 140

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLR 140
            LP E+  L  L  L L  N L E+  E   L   L  +DLSNN L+ +P  +G +  L 
Sbjct: 141 ELPKEVWSLKNLTCLQLQQNLL-EHLPEGVGLLTNLDDIDLSNNQLTAVPDSLGNLNHLV 199

Query: 141 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL---PENEDSEASTTKEDLITMATRL--- 194
           KL L+ N L++L S +       LL    ++L   P      AS  +  L     R    
Sbjct: 200 KLNLSHNKLKSLPSGISVMKNLRLLDCTHNQLESIPPVLSQMASLEQLYLRHNKLRFLPE 259

Query: 195 --SVTSKELSLEGMNLSAIPSE-IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 251
             S   KEL +    +  + +E +     ++ L+L  N ++ LP E+     L+ L L  
Sbjct: 260 LPSSRLKELHVGNNQIEVLEAEHLKHLSTLSVLELRDNKVKTLPEEIELLQGLERLDLVN 319

Query: 252 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD----GFKDIPMLQILDLSYNIASLPEN 307
           N I   P A L  L  L  L L+ NPLR +  D    G  ++       L Y    + E+
Sbjct: 320 NDISSLP-AALALLPKLKILTLEGNPLRGIRRDLLTKGTNEL-------LKYLRGRIKED 371

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG-FKNLTS--LTE 364
           P          + L      +A  ++  ++ L+ILD S+  +  +P+  F  + S  +  
Sbjct: 372 PDGKGDEPDTAMTLP----SQAKINVHTIKTLKILDYSEKQMACVPDDVFDAVGSEPVAS 427

Query: 365 LDLSDNNISALPP 377
           ++ S N ++A+PP
Sbjct: 428 VNFSKNQLAAVPP 440


>gi|340713138|ref|XP_003395105.1| PREDICTED: protein lap4-like isoform 1 [Bombus terrestris]
 gi|340713140|ref|XP_003395106.1| PREDICTED: protein lap4-like isoform 2 [Bombus terrestris]
 gi|340713144|ref|XP_003395108.1| PREDICTED: protein lap4-like isoform 4 [Bombus terrestris]
          Length = 1599

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 181/389 (46%), Gaps = 43/389 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL+   N +  +P+    L +L +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +  L  L   D  SN +        QLR L+VL L++ SL+ LPP+ G +  L+ L 
Sbjct: 99  PENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L++L  SL       L K  R  L +N                            
Sbjct: 159 LRENLLKSLPESLSQ-----LYKLERLDLGDN---------------------------- 185

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
              ++  +P+ I +   + +L L  N +Q LPPE+    +L  L +S N+++D P+ I  
Sbjct: 186 ---DIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEI-G 241

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
            L SL+ L L  N + ++P DG  ++  L IL +  N +++L  N       +LQEL L 
Sbjct: 242 GLESLTDLHLSQNVIEKLP-DGLGELQKLTILKVDQNRLSTLNSN--IGRCENLQELILT 298

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
              L E P  I +L  L  L++ +NSLQS+P    NL  L  L L DN +  LP E+G  
Sbjct: 299 ENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQC 358

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAV 411
             +L  L + GN L+ +  ++++   KAV
Sbjct: 359 T-ALHVLDVSGNRLQYLPYSLINLNLKAV 386



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 5/192 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S + +EL L+  ++  +P   +   ++ KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRSLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D P+ I  +L +L      +NP+ ++P+ GF  +  L +L L+  ++ +LP  P F 
Sbjct: 94  DIPDIPENI-KNLRALQVADFSSNPIPRLPA-GFVQLRNLTVLGLNDMSLTNLP--PDFG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  LQ L LR   L+  P  + +L +L  LDL  N ++ +P     L +L EL L  N 
Sbjct: 150 SLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQ 209

Query: 372 ISALPPELGLLE 383
           +  LPPE+G L+
Sbjct: 210 LQHLPPEIGELK 221



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 151/342 (44%), Gaps = 40/342 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +PE I +L  L   D   N I  +P+      +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LP + G L  L +L+L  N LK       QL +L  LDL +N +  LP  IGK+ 
Sbjct: 139 MSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L++L L  N L+ L   +    T A L    +RL            EDL      L   
Sbjct: 199 ALQELWLDHNQLQHLPPEIGELKTLACLDVSENRL------------EDLPEEIGGLESL 246

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           + +L L    +  +P  + E  ++T L + +N +  L   +  C +LQ LIL+ N + + 
Sbjct: 247 T-DLHLSQNVIEKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLEL 305

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P   +  L +L+ L +D N L+ +P++                           +L  L 
Sbjct: 306 P-VTIGKLHNLNNLNVDRNSLQSLPTE-------------------------IGNLKQLG 339

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            L LR  +L+  P ++ +   L +LD+S N LQ +P    NL
Sbjct: 340 VLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINL 381



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L V+ N+L+ L++N I     L ELI ++N L  +P TIG L  L  L++ +N + S+P+
Sbjct: 272 LKVDQNRLSTLNSN-IGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPT 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I     L    + +N L  LP E+G+ + L  LD+  N+L+        L L  + LS 
Sbjct: 331 EIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINLNLKAVWLSK 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|260809195|ref|XP_002599392.1| hypothetical protein BRAFLDRAFT_64248 [Branchiostoma floridae]
 gi|229284669|gb|EEN55404.1| hypothetical protein BRAFLDRAFT_64248 [Branchiostoma floridae]
          Length = 642

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 171/393 (43%), Gaps = 67/393 (17%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN+L  L ++       L  L+  +N L  +P+T GSL RL R D   N++ ++P 
Sbjct: 138 LYLTGNELRTLPSD-FGRLEHLETLMVDENHLKTLPKTFGSLRRLERFDASNNKLETLPE 196

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL----KEYCVEACQLRLSVL 119
           S  G   L    +  N LS LP   G L +L  ++L  N L    K+     C  +L V 
Sbjct: 197 SFGGLSRLKILNLSTNKLSCLPESFGDLPQLQEVELSGNSLSFLTKDLKSSHCLRKLYV- 255

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
              NN L  LPP +G ++ +++L L  N        L+N P P                 
Sbjct: 256 --DNNVLKELPPWVGHLSLIQELSLRDN-------KLMNQPLPE---------------- 290

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL-------DLSRNSIQ 232
                    +   R   T + L L G  ++A+P+ + + G +  L       +L R   Q
Sbjct: 291 ---------SFPARSGQTLRLLDLSGNFITALPASLGQLGSLESLHLGSAIGELERRHFQ 341

Query: 233 E------LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
                  LP        L+ L L  N++   PD+   SL SL  L +  N L+++P D F
Sbjct: 342 NGNWLCALPENFGRLRHLKMLHLDENQLTHLPDSF-GSLGSLEFLDVGQNWLKELP-DSF 399

Query: 287 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
            ++  LQ+L         P N  F  L  L +L L    L E P     L+QLR LDL  
Sbjct: 400 CELSNLQLL---------PSN--FGRLSSLVDLRLDNNMLGELPESFAELRQLRTLDLFC 448

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
           N L+ +P   K+LT +T LD+  N  S LPPEL
Sbjct: 449 NELREVPGALKHLTGITRLDMDKNKFS-LPPEL 480



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 178/394 (45%), Gaps = 55/394 (13%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF----YMGNNALSALPAELGKLSK 93
            PE++ +L+ + +L L  N + S+P  +  C +L        MGN+ L  LP   G L+ 
Sbjct: 55  FPESVLNLTHVQKLVLDHNSLTSLPGEL--CHTLTHLRVLSVMGND-LETLPTLFGNLTL 111

Query: 94  LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L  L    N L+E       L+ L +L L+ N L  LP + G++  L  L++  N L+TL
Sbjct: 112 LRELHAGENCLQELPDSFSDLKELRLLYLTGNELRTLPSDFGRLEHLETLMVDENHLKTL 171

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
                    P     LR RL   E  +AS  K + +  +       K L+L    LS +P
Sbjct: 172 ---------PKTFGSLR-RL---ERFDASNNKLETLPESFGGLSRLKILNLSTNKLSCLP 218

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
               +  ++ +++LS NS+  L  +L S   L+ L +  N +K+ P  +   LS +  L 
Sbjct: 219 ESFGDLPQLQEVELSGNSLSFLTKDLKSSHCLRKLYVDNNVLKELPPWV-GHLSLIQELS 277

Query: 273 LDNNPLRQVP---SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL------- 321
           L +N L   P   S   +    L++LDLS N I +LP +     L  L+ L+L       
Sbjct: 278 LRDNKLMNQPLPESFPARSGQTLRLLDLSGNFITALPAS--LGQLGSLESLHLGSAIGEL 335

Query: 322 --RRMQ----LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN----- 370
             R  Q    L   P +  RL+ L++L L +N L  +P+ F +L SL  LD+  N     
Sbjct: 336 ERRHFQNGNWLCALPENFGRLRHLKMLHLDENQLTHLPDSFGSLGSLEFLDVGQNWLKEL 395

Query: 371 --------NISALPPELGLLEPSLQALRLDGNPL 396
                   N+  LP   G L  SL  LRLD N L
Sbjct: 396 PDSFCELSNLQLLPSNFGRLS-SLVDLRLDNNML 428



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 7/198 (3%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKDWPD 259
           L L+ ++L + P  +     + KL L  NS+  LP EL  +   L+ L +  N ++  P 
Sbjct: 45  LCLKSLDLCSFPESVLNLTHVQKLVLDHNSLTSLPGELCHTLTHLRVLSVMGNDLETLP- 103

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 318
            +  +L+ L  L    N L+++P D F D+  L++L L+ N + +LP +  F  L HL+ 
Sbjct: 104 TLFGNLTLLRELHAGENCLQELP-DSFSDLKELRLLYLTGNELRTLPSD--FGRLEHLET 160

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L +    L+  P     L++L   D S N L+++PE F  L+ L  L+LS N +S LP  
Sbjct: 161 LMVDENHLKTLPKTFGSLRRLERFDASNNKLETLPESFGGLSRLKILNLSTNKLSCLPES 220

Query: 379 LGLLEPSLQALRLDGNPL 396
            G L P LQ + L GN L
Sbjct: 221 FGDL-PQLQEVELSGNSL 237



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 18/267 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + ++++ GN L+ L+ +L +S   L +L    N+L  +P  +G LS +  L L  N++++
Sbjct: 227 LQEVELSGNSLSFLTKDLKSS-HCLRKLYVDNNVLKELPPWVGHLSLIQELSLRDNKLMN 285

Query: 61  --IPSSI---SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 115
             +P S    SG  +L    +  N ++ALPA LG+L  L +L L S  + E      Q  
Sbjct: 286 QPLPESFPARSGQ-TLRLLDLSGNFITALPASLGQLGSLESLHLGS-AIGELERRHFQ-- 341

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
                 + N L  LP   G++  L+ L L  N L  L  S  +  +   L   ++ L E 
Sbjct: 342 ------NGNWLCALPENFGRLRHLKMLHLDENQLTHLPDSFGSLGSLEFLDVGQNWLKEL 395

Query: 176 EDSEASTTKEDLI-TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
            DS    +   L+ +   RLS +  +L L+   L  +P    E  ++  LDL  N ++E+
Sbjct: 396 PDSFCELSNLQLLPSNFGRLS-SLVDLRLDNNMLGELPESFAELRQLRTLDLFCNELREV 454

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAI 261
           P  L     +  L + +NK    P+ +
Sbjct: 455 PGALKHLTGITRLDMDKNKFSLPPELV 481


>gi|194743364|ref|XP_001954170.1| GF16883 [Drosophila ananassae]
 gi|261277884|sp|B3LWU3.1|SUR8_DROAN RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|190627207|gb|EDV42731.1| GF16883 [Drosophila ananassae]
          Length = 641

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 196/410 (47%), Gaps = 20/410 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  + +TV+ +  +     +TEL    N +  +P  IG L  L  L L++N + S
Sbjct: 162 IKRLDLSKSSITVIPST-VKDCVQITELYLYSNKIGQLPPEIGCLVNLRNLALNENSLTS 220

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S+  C  L    + +N L+ +P  + +L  L TL L  N++     +  QL  L++L
Sbjct: 221 LPESLQNCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N +  L   IG +  L  L ++ N L  L   + N    + L    + L +  DS 
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-L 238
            +   + L+ +  R +            L+++P+ +     + + ++  N I +LP   L
Sbjct: 341 GNL--KSLVRLGMRYN-----------RLTSVPATLKNCKCMDEFNVEGNGITQLPDGML 387

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +S + L T+ LSRN+   +P       +++  + L++N + ++P   F     L  L++ 
Sbjct: 388 ASLSGLTTITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMK 447

Query: 299 YNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N+  +LP +    +  ++ EL L    L++ P DI+ LQ L IL LS N L+ IP    
Sbjct: 448 ENMLTALPLD--IGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 505

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
           NL  L  LDL +N I  LP E+GLL   LQ L L  N +  + R+I   G
Sbjct: 506 NLRRLRILDLEENRIETLPHEIGLLH-ELQRLILQTNQITMLPRSIGHLG 554



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 178/407 (43%), Gaps = 68/407 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I +   LT L  S N L  +PE IG+   L  LDL  N +L IP SI    SL    M  
Sbjct: 294 IGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRY 353

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKM 136
           N L+++PA L     +   ++  N + +    + A    L+ + LS N  +  P      
Sbjct: 354 NRLTSVPATLKNCKCMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFTSYP------ 407

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
                   TG P                                          A   +V
Sbjct: 408 --------TGGP------------------------------------------AQFTNV 417

Query: 197 TSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
            S  ++LE   +  IP  I+  A  +TKL++  N +  LP ++ +  ++  L L+ N ++
Sbjct: 418 YS--INLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQ 475

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             PD I+ +L +L  L L NN L+++P +   ++  L+ILDL  N I +LP       L 
Sbjct: 476 KLPDDIM-NLQNLEILILSNNMLKKIP-NTIGNLRRLRILDLEENRIETLPHE--IGLLH 531

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NIS 373
            LQ L L+  Q+   P  I  L  L  L +S+N+LQ +PE   +L SL  L ++ N  + 
Sbjct: 532 ELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLE 591

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            LP EL L + +L+ L +D  PL +I   I   G   VL++LK   P
Sbjct: 592 KLPFELALCQ-NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSP 637



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 190/430 (44%), Gaps = 66/430 (15%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L  L  ++N L  +PE++ + ++L  LDL  N++  IP  I    SL   Y+  
Sbjct: 202 IGCLVNLRNLALNENSLTSLPESLQNCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRF 261

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++A+  +L +L  L  L L  N+++E       L  L+ LD+S+N L  LP +IG   
Sbjct: 262 NRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCV 321

Query: 138 TLRKLLLTGNPLRTLRSSLVN--------------GPTPALLKYLRSRLPENEDSEASTT 183
            L  L L  N L  +  S+ N                 PA LK  +     N +    T 
Sbjct: 322 NLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLTSVPATLKNCKCMDEFNVEGNGITQ 381

Query: 184 KED--------LITMA-TRLSVTSK------------ELSLEGMNLSAIPSEIW-EAGEI 221
             D        L T+  +R   TS              ++LE   +  IP  I+  A  +
Sbjct: 382 LPDGMLASLSGLTTITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGL 441

Query: 222 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
           TKL++  N +  LP ++ +  ++  L L+ N ++  PD I+ +L +L  L L NN L+++
Sbjct: 442 TKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIM-NLQNLEILILSNNMLKKI 500

Query: 282 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
           P +   ++  L+ILDL  N I +LP       L  LQ L L+  Q+   P  I  L  L 
Sbjct: 501 P-NTIGNLRRLRILDLEENRIETLPHE--IGLLHELQRLILQTNQITMLPRSIGHLGNLT 557

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDN-------------------NI-----SALP 376
            L +S+N+LQ +PE   +L SL  L ++ N                   NI     S +P
Sbjct: 558 HLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPLSTIP 617

Query: 377 PELGLLEPSL 386
           PE+    PSL
Sbjct: 618 PEIQAGGPSL 627



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 3/175 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M +L++  N L  L ++ I +   L  LI S N+L  +P TIG+L RL  LDL +NRI +
Sbjct: 464 MVELNLATNALQKLPDD-IMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIET 522

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I     L    +  N ++ LP  +G L  L  L +  N L+    E   L  L  L
Sbjct: 523 LPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENL 582

Query: 120 DLSNN-SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            ++ N  L  LP E+     L+ L +   PL T+   +  G    +L++L+   P
Sbjct: 583 YINQNPGLEKLPFELALCQNLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKMHSP 637



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 118/281 (41%), Gaps = 62/281 (22%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E N++  +   + +    LT+L   +N+L  +P  IG+   ++ L+L  N +  +P 
Sbjct: 420 INLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPD 479

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I    +L    + NN L  +P  +G L                       RL +LDL  
Sbjct: 480 DIMNLQNLEILILSNNMLKKIPNTIGNLR----------------------RLRILDLEE 517

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N +  LP EIG +  L++L+L  N +  L         P  + +L +             
Sbjct: 518 NRIETLPHEIGLLHELQRLILQTNQITML---------PRSIGHLGN------------- 555

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCA 242
                   T LSV+         NL  +P EI     +  L +++N  +++LP EL+ C 
Sbjct: 556 -------LTHLSVSEN-------NLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQ 601

Query: 243 SLQTLILSRNKIKDWPDAILTSLSS--LSCLKLDNNPLRQV 281
           +L+ L + +  +   P  I     S  L  LK+ ++P RQ+
Sbjct: 602 NLKYLNIDKCPLSTIPPEIQAGGPSLVLQWLKM-HSPYRQM 641



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 1/87 (1%)

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           R + ++ LDLS++S+  IP   K+   +TEL L  N I  LPPE+G L  +L+ L L+ N
Sbjct: 158 RDEGIKRLDLSKSSITVIPSTVKDCVQITELYLYSNKIGQLPPEIGCLV-NLRNLALNEN 216

Query: 395 PLRSIRRTILDRGTKAVLKYLKDKIPE 421
            L S+  ++ +     VL    +K+ E
Sbjct: 217 SLTSLPESLQNCNQLKVLDLRHNKLAE 243


>gi|456971330|gb|EMG11963.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Grippotyphosa str. LT2186]
          Length = 349

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 160/357 (44%), Gaps = 63/357 (17%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           LI S+  L  +P+ I  L  L  LDL  N++ ++P  I    +L    +  N L+ALP E
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 146
           +G+L  L  L L++NQL     E  QL+ L +LDL NN L+ LP EIGK+  L+ L L  
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYE 170

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
           + L  L   +  G    L                                   EL L   
Sbjct: 171 SQLTILPQEI--GKLQNL----------------------------------HELDLSHN 194

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            L+ +P EI +   + +  L  N +  LP E+    +L  L L  N++   P  I   L 
Sbjct: 195 QLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEI-GQLQ 253

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
           +L    LDNN    +P    K+I  LQ                     +LQELYL   QL
Sbjct: 254 NLQRFVLDNNQFTILP----KEIGQLQ---------------------NLQELYLSYNQL 288

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
              P +I +LQ+L+ L+L  N L ++PE  + L +L  L+LS+N +  +P E+G L+
Sbjct: 289 TTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQ 345



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 134/291 (46%), Gaps = 34/291 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+LT L    I     L  LI   N L  +P+ IG L  L  L L+ N++ ++P+
Sbjct: 74  LDLGHNQLTALPKE-IGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPT 132

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    +GNN L+ LP E+GKL  L  L L+ +QL     E  +L+ L  LDLS
Sbjct: 133 EIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLS 192

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N L+ LP EIG++  L++ +L  N L  L   +  G    L                  
Sbjct: 193 HNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEI--GKLQNL------------------ 232

Query: 183 TKEDLITMATRLSVTSKELS---------LEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
              +L     +L++  KE+          L+    + +P EI +   + +L LS N +  
Sbjct: 233 --HELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTT 290

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
            P E+     LQTL L  N++   P+ I   L +L  L L  N L+ +P +
Sbjct: 291 FPKEIGKLQKLQTLNLWNNQLTTLPEEI-EQLKNLKTLNLSENQLKTIPQE 340



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 123/247 (49%), Gaps = 17/247 (6%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E   T +DL T A +  +  + L L    L+ +P EI +   +  LDL  N +  LP 
Sbjct: 28  QAEEPGTYQDL-TKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPK 86

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    +LQ LIL  N++   P  I   L +L  L L+NN L  +P++  + +  LQ+LD
Sbjct: 87  EIGQLKNLQLLILYYNQLTALPKEI-GQLKNLKVLFLNNNQLTTLPTE-IRQLKNLQMLD 144

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N + +LP+      L +LQ L L   QL   P +I +LQ L  LDLS N L  +P+ 
Sbjct: 145 LGNNQLTTLPK--EIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKE 202

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN----------PLRSIRRTILD 405
              L +L    L +N ++ LP E+G L+ +L  L L  N           L++++R +LD
Sbjct: 203 IGQLQNLQRFVLDNNQLTILPKEIGKLQ-NLHELYLGHNQLTILPKEIGQLQNLQRFVLD 261

Query: 406 RGTKAVL 412
                +L
Sbjct: 262 NNQFTIL 268



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 74/141 (52%), Gaps = 2/141 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +  ++ N+LT+L    I     L EL    N L  +P+ IG L  L R  L  N+   
Sbjct: 209 LQRFVLDNNQLTILPKE-IGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTI 267

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E Y+  N L+  P E+GKL KL TL+L +NQL     E  QL+ L  L
Sbjct: 268 LPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTL 327

Query: 120 DLSNNSLSGLPPEIGKMTTLR 140
           +LS N L  +P EIG++  L+
Sbjct: 328 NLSENQLKTIPQEIGQLQNLK 348


>gi|418687360|ref|ZP_13248519.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410737684|gb|EKQ82423.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 402

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 178/396 (44%), Gaps = 65/396 (16%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G+KL  LS   I     L +L  + N L  +P  IG L  L  LDL+ N +  +P 
Sbjct: 53  LNLSGSKLATLSKE-IGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPK 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    +G N L+ LP E+G+L  L  L+L  N+L     +  QL+ L VL+L 
Sbjct: 112 EIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLD 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP +IG++  L+ L   GN L T    +  G    L                  
Sbjct: 172 LNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEI--GQLQKL------------------ 211

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                           +EL+L    L+ +  E+ +   +  LDL  N +  LP E+   +
Sbjct: 212 ----------------QELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLS 255

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
            LQ L L  N++   P+ I   L  L  L L NNPLR +P    K+I  LQ         
Sbjct: 256 KLQKLYLYGNQLTTLPEEI-GQLKKLQELYLGNNPLRTLP----KEIEQLQ--------- 301

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
                        LQ LYL   Q+   P +I +LQ L+ L+L  N L ++P+    L +L
Sbjct: 302 ------------KLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNL 349

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
            EL+L  N ++ LP E+G L+  L+ L L  NP+ S
Sbjct: 350 QELNLEFNQLATLPKEVGQLQ-KLRKLNLYNNPIAS 384



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 171/355 (48%), Gaps = 43/355 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L+L  +++ ++   I    +L + Y+  N L+ LP E+G+L  L  LDL+SN+L     E
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L+ L VL+L  N L+ LP E+G++  L+ L L  N L                    
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKL-------------------- 152

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           + LPE             I     L V    L+L+   L+ +P +I +   +  L+   N
Sbjct: 153 TILPEK------------IGQLQNLQV----LNLDLNKLTILPEKIGQLQNLQILNSQGN 196

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +   P E+     LQ L L  N++    + ++  L +L  L L +NPL  +P +    +
Sbjct: 197 QLTTFPKEIGQLQKLQELNLGFNRLTTLREEVV-QLQNLQILDLISNPLTTLPKE-IGQL 254

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ L L  N + +LPE      L  LQELYL    LR  P +I +LQ+L+ L L  N 
Sbjct: 255 SKLQKLYLYGNQLTTLPE--EIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQ 312

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           + + P+    L +L EL+L  N ++ LP E+G L+ +LQ L L+ N L ++ + +
Sbjct: 313 ITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQ-NLQELNLEFNQLATLPKEV 366



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 90/154 (58%), Gaps = 4/154 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 59
           + +L++  N+LT L   ++    + + +LI+  N L  +P+ IG LS+L +L L+ N++ 
Sbjct: 211 LQELNLGFNRLTTLREEVVQLQNLQILDLIS--NPLTTLPKEIGQLSKLQKLYLYGNQLT 268

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 118
           ++P  I     L E Y+GNN L  LP E+ +L KL TL L  NQ+  +  E  QL+ L  
Sbjct: 269 TLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQE 328

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L+L  N L+ LP EIG++  L++L L  N L TL
Sbjct: 329 LNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATL 362



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 23/168 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL + GN+LT L    I     L EL    N L  +P+ I  L +L  L L  N+I +
Sbjct: 257 LQKLYLYGNQLTTLPEE-IGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITT 315

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
            P  I    +L E  +G N L+ LP E+G+L  L  L+L  NQ                 
Sbjct: 316 FPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQ----------------- 358

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
                L+ LP E+G++  LRKL L  NP+ + +   +    P  + Y 
Sbjct: 359 -----LATLPKEVGQLQKLRKLNLYNNPIASEKIERIRKLLPKCIIYF 401


>gi|418726611|ref|ZP_13285222.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960521|gb|EKO24275.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 447

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 126/378 (33%), Positives = 179/378 (47%), Gaps = 18/378 (4%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G   T L    I     L EL    N L   P  I  L +L  LDL +NR++ +P+
Sbjct: 53  LNLSGQNFTTLPKE-IEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPN 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  +  N L   P E+G+L  L TL+L  NQL    VE  QL+ L  L+L 
Sbjct: 112 EIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLR 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++  L+ L L  N L TL   +        L+ L++ L  +E+   + 
Sbjct: 172 KNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEI------GQLQNLQT-LGLSENQLTTF 224

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
            KE  I     L    +EL L    L+A+P EI +   +  L+LS N +   P E+    
Sbjct: 225 PKE--IGQLENL----QELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLK 278

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
            LQ L LS N++   P  I   L  L  L L  N L  +P +    +  LQ+LDL YN  
Sbjct: 279 KLQDLGLSYNRLVILPKEI-GQLEKLQDLGLSYNRLVILPKE-IGQLKNLQMLDLCYNQF 336

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
               +     L +L +L L   QL   P +I +L+ L  LDL  N L ++P+    L +L
Sbjct: 337 K-TVSKKIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNL 395

Query: 363 TELDLSDNNISALPPELG 380
             L L  N ++ LP E+G
Sbjct: 396 YNLGLGTNQLTTLPKEIG 413



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 122/251 (48%), Gaps = 30/251 (11%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE---------------------- 214
           D +   T  DL T A +  +  + L+L G N + +P E                      
Sbjct: 30  DEDEPGTYMDL-TKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPA 88

Query: 215 -IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
            I E  ++  LDLS N +  LP E+    +LQ L L +NK+  +P  I   L +L  L L
Sbjct: 89  VIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEI-GQLRNLQTLNL 147

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
            +N L  +P +    +  L+ L+L  N +  LP+      L +LQ L L+  QL   P +
Sbjct: 148 QDNQLATLPVE-IGQLQNLEKLNLRKNRLTVLPK--EIGQLQNLQTLNLQDNQLATLPVE 204

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
           I +LQ L+ L LS+N L + P+    L +L ELDL +N ++ALP E+G L+ +L+ L L 
Sbjct: 205 IGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLK-NLENLELS 263

Query: 393 GNPLRSIRRTI 403
            N L +  + I
Sbjct: 264 ENQLTTFPKEI 274


>gi|350417077|ref|XP_003491245.1| PREDICTED: protein lap4-like isoform 3 [Bombus impatiens]
          Length = 1835

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 181/389 (46%), Gaps = 43/389 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL+   N +  +P+    L +L +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +  L  L   D  SN +        QLR L+VL L++ SL+ LPP+ G +  L+ L 
Sbjct: 99  PENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L++L  SL       L K  R  L +N                            
Sbjct: 159 LRENLLKSLPESLSQ-----LYKLERLDLGDN---------------------------- 185

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
              ++  +P+ I +   + +L L  N +Q LPPE+    +L  L +S N+++D P+ I  
Sbjct: 186 ---DIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEI-G 241

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
            L SL+ L L  N + ++P DG  ++  L IL +  N +++L  N       +LQEL L 
Sbjct: 242 GLESLTDLHLSQNVIEKLP-DGLGELQKLTILKVDQNRLSTLNSN--IGRCENLQELILT 298

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
              L E P  I +L  L  L++ +NSLQS+P    NL  L  L L DN +  LP E+G  
Sbjct: 299 ENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQC 358

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAV 411
             +L  L + GN L+ +  ++++   KAV
Sbjct: 359 T-ALHVLDVSGNRLQYLPYSLINLNLKAV 386



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 5/192 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S + +EL L+  ++  +P   +   ++ KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRSLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D P+ I  +L +L      +NP+ ++P+ GF  +  L +L L+  ++ +LP  P F 
Sbjct: 94  DIPDIPENI-KNLRALQVADFSSNPIPRLPA-GFVQLRNLTVLGLNDMSLTNLP--PDFG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  LQ L LR   L+  P  + +L +L  LDL  N ++ +P     L +L EL L  N 
Sbjct: 150 SLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQ 209

Query: 372 ISALPPELGLLE 383
           +  LPPE+G L+
Sbjct: 210 LQHLPPEIGELK 221



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 151/342 (44%), Gaps = 40/342 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +PE I +L  L   D   N I  +P+      +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LP + G L  L +L+L  N LK       QL +L  LDL +N +  LP  IGK+ 
Sbjct: 139 MSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L++L L  N L+ L   +    T A L    +RL            EDL      L   
Sbjct: 199 ALQELWLDHNQLQHLPPEIGELKTLACLDVSENRL------------EDLPEEIGGLESL 246

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           + +L L    +  +P  + E  ++T L + +N +  L   +  C +LQ LIL+ N + + 
Sbjct: 247 T-DLHLSQNVIEKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLEL 305

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P   +  L +L+ L +D N L+ +P++                           +L  L 
Sbjct: 306 P-VTIGKLHNLNNLNVDRNSLQSLPTE-------------------------IGNLKQLG 339

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            L LR  +L+  P ++ +   L +LD+S N LQ +P    NL
Sbjct: 340 VLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINL 381



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L V+ N+L+ L++N I     L ELI ++N L  +P TIG L  L  L++ +N + S+P+
Sbjct: 272 LKVDQNRLSTLNSN-IGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPT 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I     L    + +N L  LP E+G+ + L  LD+  N+L+        L L  + LS 
Sbjct: 331 EIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINLNLKAVWLSK 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|418701717|ref|ZP_13262639.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759281|gb|EKR25496.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 379

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 167/346 (48%), Gaps = 43/346 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L +L  L L  N L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 113 IEKLQKLQWLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 166

Query: 170 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 167 SLNLSYNQIKTIPKEIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 218

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  +     K+
Sbjct: 219 NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTLS----KE 273

Query: 289 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
           I  LQ                     +L+ L LR  QL   P +I +L+ L++LDL  N 
Sbjct: 274 IEQLQ---------------------NLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQ 312

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           L ++PEG   L +L  L L++N ++ LP E+G L+ +LQ L L+ N
Sbjct: 313 LTTLPEGIGQLQNLKVLFLNNNQLTTLPKEIGQLK-NLQELYLNNN 357



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 156/327 (47%), Gaps = 24/327 (7%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+   L    I     L EL  +KN L  +P+ IG L  L +L+L  N+I +IP 
Sbjct: 53  LDLSANRFKTLPKE-IGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L   Y+  N L+ LP E+G+L KL  L L  NQL     E  QL+ L  L+LS
Sbjct: 112 EIEKLQKLQWLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N +  +P EI K+  L+ L L  N L TL   +              +L   +  + ST
Sbjct: 172 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI-------------GQLQNLQSLDLST 218

Query: 183 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
            +  L T+   +      ++L L    L+ +P+EI +   +  L+L  N +  L  E+  
Sbjct: 219 NR--LTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQ 276

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             +L++L L  N++  +P  I   L +L  L L +N L  +P +G   +  L++L L+ N
Sbjct: 277 LQNLKSLDLRSNQLTIFPKEI-GQLKNLQVLDLGSNQLTTLP-EGIGQLQNLKVLFLNNN 334

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQL 326
            + +LP+      L +LQELYL   Q 
Sbjct: 335 QLTTLPK--EIGQLKNLQELYLNNNQF 359



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 143/288 (49%), Gaps = 21/288 (7%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RL 172
           L++  LDLS N    LP EIGK+  L++L L  N L  L   +        LK LR   L
Sbjct: 48  LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEI------GQLKNLRKLNL 101

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
             N+        E L  +        + L L    L+ +P EI +  ++  L L +N + 
Sbjct: 102 SANQIKTIPKEIEKLQKL--------QWLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLT 153

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            LP E+    +L++L LS N+IK  P  I   L  L  L LDNN L  +P +    +  L
Sbjct: 154 TLPQEIGQLKNLKSLNLSYNQIKTIPKEI-EKLQKLQSLGLDNNQLTTLPQE-IGQLQNL 211

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           Q LDLS N + +LP+      L +LQ+LYL   QL   P +I +L+ L+ L+L  N L +
Sbjct: 212 QSLDLSTNRLTTLPQ--EIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTT 269

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           + +  + L +L  LDL  N ++  P E+G L+ +LQ L L  N L ++
Sbjct: 270 LSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLK-NLQVLDLGSNQLTTL 316



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 113/222 (50%), Gaps = 8/222 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+SE+ T  +    +   L V +  L L       +P EI +   + +L+L++N +  LP
Sbjct: 30  EESESGTYTDLAKALQNPLKVRT--LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +L+ L LS N+IK  P  I   L  L  L L  N L  +P +    +  LQ L
Sbjct: 88  KEIGQLKNLRKLNLSANQIKTIPKEI-EKLQKLQWLYLPKNQLTTLPQE-IGQLQKLQWL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L  N + +LP+      L +L+ L L   Q++  P +I +LQ+L+ L L  N L ++P+
Sbjct: 146 YLPKNQLTTLPQ--EIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQ 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
               L +L  LDLS N ++ LP E+G L+ +LQ L L  N L
Sbjct: 204 EIGQLQNLQSLDLSTNRLTTLPQEIGHLQ-NLQDLYLVSNQL 244



 Score = 43.1 bits (100), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 1/66 (1%)

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
           ++R LDLS N  +++P+    L +L EL+L+ N ++ LP E+G L+ +L+ L L  N ++
Sbjct: 49  KVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLK-NLRKLNLSANQIK 107

Query: 398 SIRRTI 403
           +I + I
Sbjct: 108 TIPKEI 113



 Score = 42.7 bits (99), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT+     I     L  L    N L  +PE IG L  L  L L+ N++ +
Sbjct: 280 LKSLDLRSNQLTIFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLQNLKVLFLNNNQLTT 338

Query: 61  IPSSISGCCSLAEFYMGNNALS 82
           +P  I    +L E Y+ NN  S
Sbjct: 339 LPKEIGQLKNLQELYLNNNQFS 360


>gi|124010573|ref|ZP_01695196.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
 gi|123982251|gb|EAY23831.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
          Length = 519

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 200/455 (43%), Gaps = 81/455 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIA-----------------------SKNLLNG 37
           + +LD+ G KL  +S N I  +T L EL                         S N L  
Sbjct: 37  VYRLDLSGQKLKAISRN-IHVFTRLQELKLAQDQLDSINSEVTALTNLQIVDLSHNQLGK 95

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +PE +  L  L  L+L  N+I  +P+ I+    L    +  N +  LPAEL +LS+L TL
Sbjct: 96  LPEFLFKLRHLHTLNLAHNQIKELPTGIARLNKLKYLNIVGNPIKKLPAELTQLSQLATL 155

Query: 98  DLHSNQLKE------------------------YCVEACQLR------------LSVLDL 121
                 L +                        Y +E   LR            L VL L
Sbjct: 156 KADKKLLVQWEMLRKKNKLFTNLEEALKTPAQVYKLELHSLRQIPVQKLKKLKNLEVLKL 215

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY-LRSRLPENEDSEA 180
           +NN+L  LP E+G + +L++L L  N L+T+   +  G    L K  L+    E    E 
Sbjct: 216 NNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEI--GDLQQLKKLNLKMNRVEGLPKEL 273

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
              K+             ++L L    L  +P E+ +   + KLDLSRN +Q LP EL++
Sbjct: 274 GKLKQ------------LEQLDLYNNRLKTVPKELGKLTALKKLDLSRNRLQNLPQELTN 321

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             +L+ L L  N +   P   L +L  L  L LD N L  +P +    +  L+ LDL  N
Sbjct: 322 AQALEKLNLRGNALTQLPKN-LGNLQQLKRLNLDANRLVGLP-ESLGKLKNLESLDLREN 379

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            +  LPE+     L  L+ L LR+  L + P  I +LQ L  LD   N+L+ +PE    L
Sbjct: 380 ALKKLPES--LGGLEKLKNLQLRKNALTKLPESIGKLQNLESLDSWGNALEGLPESIGGL 437

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
             L +++L+ N ++ LP  LG LE +LQ L L  N
Sbjct: 438 KKLKKMNLAYNQLTELPESLGKLE-NLQTLNLWNN 471



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 183/384 (47%), Gaps = 33/384 (8%)

Query: 46  SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 105
           +++ RLDL   ++ +I  +I     L E  +  + L ++ +E+  L+ L  +DL  NQL 
Sbjct: 35  TKVYRLDLSGQKLKAISRNIHVFTRLQELKLAQDQLDSINSEVTALTNLQIVDLSHNQLG 94

Query: 106 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164
           +      +LR L  L+L++N +  LP  I ++  L+ L + GNP++ L + L      A 
Sbjct: 95  KLPEFLFKLRHLHTLNLAHNQIKELPTGIARLNKLKYLNIVGNPIKKLPAELTQLSQLAT 154

Query: 165 LKYLRSRLPENEDSEASTTKEDLIT-MATRLSVTSKELSLEGMNLSAIP-SEIWEAGEIT 222
           LK  +  L +    E    K  L T +   L   ++   LE  +L  IP  ++ +   + 
Sbjct: 155 LKADKKLLVQ---WEMLRKKNKLFTNLEEALKTPAQVYKLELHSLRQIPVQKLKKLKNLE 211

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--------------------- 261
            L L+ N+++ LP EL S  SL+ L L  N +K  P  I                     
Sbjct: 212 VLKLNNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLKKLNLKMNRVEGLPK 271

Query: 262 -LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
            L  L  L  L L NN L+ VP +    +  L+ LDLS N + +LP+    ++   L++L
Sbjct: 272 ELGKLKQLEQLDLYNNRLKTVPKE-LGKLTALKKLDLSRNRLQNLPQ--ELTNAQALEKL 328

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            LR   L + P ++  LQQL+ L+L  N L  +PE    L +L  LDL +N +  LP  L
Sbjct: 329 NLRGNALTQLPKNLGNLQQLKRLNLDANRLVGLPESLGKLKNLESLDLRENALKKLPESL 388

Query: 380 GLLEPSLQALRLDGNPLRSIRRTI 403
           G LE  L+ L+L  N L  +  +I
Sbjct: 389 GGLE-KLKNLQLRKNALTKLPESI 411



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 145/338 (42%), Gaps = 64/338 (18%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +P+ +GSL  L  L L  N + ++P  I     L +  +  N +  LP ELGKL 
Sbjct: 218 NALRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLKKLNLKMNRVEGLPKELGKLK 277

Query: 93  KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
           +L  LDL++N+LK    E  +L  L  LDLS N L  LP E+     L KL L GN L  
Sbjct: 278 QLEQLDLYNNRLKTVPKELGKLTALKKLDLSRNRLQNLPQELTNAQALEKLNLRGNALTQ 337

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
           L  +L N      L+ L                              K L+L+   L  +
Sbjct: 338 LPKNLGN------LQQL------------------------------KRLNLDANRLVGL 361

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P  + +   +  LDL  N++++LP  L     L+ L L +N +   P++I   L +L  L
Sbjct: 362 PESLGKLKNLESLDLRENALKKLPESLGGLEKLKNLQLRKNALTKLPESI-GKLQNLESL 420

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 331
               N L  +P +    +  L+ ++L+YN                        QL E P 
Sbjct: 421 DSWGNALEGLP-ESIGGLKKLKKMNLAYN------------------------QLTELPE 455

Query: 332 DILRLQQLRILDLSQNS-LQSIPEGFKNLTSLTELDLS 368
            + +L+ L+ L+L  NS LQ +P+   NL +L    + 
Sbjct: 456 SLGKLENLQTLNLWNNSTLQKLPKSLGNLKNLQSFKMQ 493



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 133/290 (45%), Gaps = 17/290 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           + S   L EL    NLL  +P+ IG L +L +L+L  NR+  +P  +     L +  + N
Sbjct: 227 LGSLKSLKELHLQNNLLKTVPKEIGDLQQLKKLNLKMNRVEGLPKELGKLKQLEQLDLYN 286

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L  +P ELGKL+ L  LDL  N+L+    E    + L  L+L  N+L+ LP  +G + 
Sbjct: 287 NRLKTVPKELGKLTALKKLDLSRNRLQNLPQELTNAQALEKLNLRGNALTQLPKNLGNLQ 346

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSV 196
            L++L L  N L  L  SL        LK L S  L EN   +   +   L  +      
Sbjct: 347 QLKRLNLDANRLVGLPESL------GKLKNLESLDLRENALKKLPESLGGLEKL------ 394

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K L L    L+ +P  I +   +  LD   N+++ LP  +     L+ + L+ N++ +
Sbjct: 395 --KNLQLRKNALTKLPESIGKLQNLESLDSWGNALEGLPESIGGLKKLKKMNLAYNQLTE 452

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 306
            P++ L  L +L  L L NN   Q       ++  LQ   + ++   L E
Sbjct: 453 LPES-LGKLENLQTLNLWNNSTLQKLPKSLGNLKNLQSFKMQFDKLPLGE 501


>gi|440801654|gb|ELR22663.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 936

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 188/392 (47%), Gaps = 26/392 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L + GN    + N L  +   L +L    N L  +P  IG+L+ L  L L  N + S
Sbjct: 199 LTNLKLVGNDFKSIGNELSHA-VCLQKLDLRCNFLTTLPPEIGNLTALRHLLLRNNCLTS 257

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P+ +     L E  +GNN L+ +P E+ +LS L  LD   NQ+ E       + L  LD
Sbjct: 258 LPAELGNLSELLELSLGNNKLTWVPPEITRLSNLRNLDFWENQISELPDLGGLVSLQELD 317

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           +S N+L  LP  +  +T+LR+L    N L +L +S+      + L    +R+ E     A
Sbjct: 318 VSFNTLQALPEGLETLTSLRRLWANNNELTSLPASIRGLVGLSELSVTSNRITELPSEIA 377

Query: 181 STTKEDLITMATRLSVTSKELS----------------LEGMNLSAIPSEIWEAGEITKL 224
                  ++  +RLS ++  +S                L   NL   P  ++EA  + +L
Sbjct: 378 Q------LSCLSRLSASANFISELNVDLSNLQHLWCLELGHNNLMEFPVSVFEAPGLLQL 431

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           +L  N +  +P ++     LQ L LS NKI+  P+  +  + +L  L + +N   + P  
Sbjct: 432 NLFGNGLSVVPDDIGRLTKLQRLYLSCNKIEHLPEQ-MKEMVALKDLYIGSNSFTEFPPV 490

Query: 285 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
            F+   + ++   + N + +P  P  S L  L+ L++   +++E P +I  L  L+ LDL
Sbjct: 491 VFELTTLRELSLANSNFSVVP--PHISKLAGLEVLHMNGNEIKELPAEIGALINLKELDL 548

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           S N L ++P  F  L  L ELD+S N +++LP
Sbjct: 549 SHNCLAALPAEFTALRRLAELDISHNELTSLP 580



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 173/381 (45%), Gaps = 43/381 (11%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +LD++   LT L  + I     LT L  + N +  +P  I +L+RL    L  N++ S+P
Sbjct: 41  RLDLKNQNLTDLPKDFIIE--ELTWLSLNHNAIESLPPEIANLTRLTIFRLFGNKLKSLP 98

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
             I     L    +G N LS+LP ++G LS L  L +H N+L+E   E  +L  L  L+L
Sbjct: 99  PEIGALAHLTTLDLGKNLLSSLPPQIGDLSLLKELHVHWNRLEEVPPEVGKLTALHTLNL 158

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
             N L+ LP E+  +T L  L +  N   TL         PA++    S           
Sbjct: 159 YINRLTTLPDELQSLTALENLDIAHNAFSTL---------PAVIAQFSSL---------- 199

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
                              L L G +  +I +E+  A  + KLDL  N +  LPPE+ + 
Sbjct: 200 -----------------TNLKLVGNDFKSIGNELSHAVCLQKLDLRCNFLTTLPPEIGNL 242

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
            +L+ L+L  N +   P A L +LS L  L L NN L  VP +    +  L+ LD   N 
Sbjct: 243 TALRHLLLRNNCLTSLP-AELGNLSELLELSLGNNKLTWVPPE-ITRLSNLRNLDFWEN- 299

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
             + E P    L  LQEL +    L+  P  +  L  LR L  + N L S+P   + L  
Sbjct: 300 -QISELPDLGGLVSLQELDVSFNTLQALPEGLETLTSLRRLWANNNELTSLPASIRGLVG 358

Query: 362 LTELDLSDNNISALPPELGLL 382
           L+EL ++ N I+ LP E+  L
Sbjct: 359 LSELSVTSNRITELPSEIAQL 379



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 181/395 (45%), Gaps = 22/395 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           IA+ T LT      N L  +P  IG+L+ L  LDL +N + S+P  I     L E ++  
Sbjct: 78  IANLTRLTIFRLFGNKLKSLPPEIGALAHLTTLDLGKNLLSSLPPQIGDLSLLKELHVHW 137

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  +P E+GKL+ L TL+L+ N+L     E   L  L  LD+++N+ S LP  I + +
Sbjct: 138 NRLEEVPPEVGKLTALHTLNLYINRLTTLPDELQSLTALENLDIAHNAFSTLPAVIAQFS 197

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALL----KYLRSRLPENEDSEASTTKEDLITMATR 193
           +L  L L GN  +++ + L +      L     +L +  PE  +    T    L+     
Sbjct: 198 SLTNLKLVGNDFKSIGNELSHAVCLQKLDLRCNFLTTLPPEIGN---LTALRHLLLRNNC 254

Query: 194 LSVTSKELS--------LEGMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 244
           L+    EL           G N L+ +P EI     +  LD   N I EL P+L    SL
Sbjct: 255 LTSLPAELGNLSELLELSLGNNKLTWVPPEITRLSNLRNLDFWENQISEL-PDLGGLVSL 313

Query: 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL 304
           Q L +S N ++  P+  L +L+SL  L  +NN L  +P+     + + ++   S  I  L
Sbjct: 314 QELDVSFNTLQALPEG-LETLTSLRRLWANNNELTSLPASIRGLVGLSELSVTSNRITEL 372

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
           P     + L  L  L      + E   D+  LQ L  L+L  N+L   P        L +
Sbjct: 373 PSE--IAQLSCLSRLSASANFISELNVDLSNLQHLWCLELGHNNLMEFPVSVFEAPGLLQ 430

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L+L  N +S +P ++G L   LQ L L  N +  +
Sbjct: 431 LNLFGNGLSVVPDDIGRL-TKLQRLYLSCNKIEHL 464



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 123/256 (48%), Gaps = 17/256 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S+L V  N++T L +  IA  + L+ L AS N ++ +   + +L  L  L+L  N ++ 
Sbjct: 359 LSELSVTSNRITELPSE-IAQLSCLSRLSASANFISELNVDLSNLQHLWCLELGHNNLME 417

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
            P S+     L +  +  N LS +P ++G+L+KL  L L  N++ E+  E  +  +++ D
Sbjct: 418 FPVSVFEAPGLLQLNLFGNGLSVVPDDIGRLTKLQRLYLSCNKI-EHLPEQMKEMVALKD 476

Query: 121 L--SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           L   +NS +  PP + ++TTLR+L L  +       S+V      L       +  NE  
Sbjct: 477 LYIGSNSFTEFPPVVFELTTLRELSLANSNF-----SVVPPHISKLAGLEVLHMNGNEIK 531

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E       LI +        KEL L    L+A+P+E      + +LD+S N +  LP  +
Sbjct: 532 ELPAEIGALINL--------KELDLSHNCLAALPAEFTALRRLAELDISHNELTSLPVGI 583

Query: 239 SSCASLQTLILSRNKI 254
            S   +  L L  N++
Sbjct: 584 KSFQQICQLKLGHNRL 599



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 8/196 (4%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +L++ GN L+V+ ++ I   T L  L  S N +  +PE +  +  L  L +  N     P
Sbjct: 430 QLNLFGNGLSVVPDD-IGRLTKLQRLYLSCNKIEHLPEQMKEMVALKDLYIGSNSFTEFP 488

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
             +    +L E  + N+  S +P  + KL+ L  L ++ N++KE   E   L  L  LDL
Sbjct: 489 PVVFELTTLRELSLANSNFSVVPPHISKLAGLEVLHMNGNEIKELPAEIGALINLKELDL 548

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL-----PENE 176
           S+N L+ LP E   +  L +L ++ N L +L   + +      LK   +RL     P  E
Sbjct: 549 SHNCLAALPAEFTALRRLAELDISHNELTSLPVGIKSFQQICQLKLGHNRLAKSHIPHFE 608

Query: 177 DSEASTTKEDLITMAT 192
           D     + E + T+AT
Sbjct: 609 DPNMWVSSEGM-TVAT 623


>gi|307150709|ref|YP_003886093.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
 gi|306980937|gb|ADN12818.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
          Length = 876

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 121/350 (34%), Positives = 173/350 (49%), Gaps = 46/350 (13%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  IG L+ L  LDL  N++ ++PS I    +L    + +N L+ALP E+GKLS  
Sbjct: 28  LETLPPEIGKLTALRYLDLRNNKLTTLPSEIGKLINLTSLNLTDNQLTALPPEIGKLSN- 86

Query: 95  GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 154
                                LS L LS N L+ LPPEIG++T L +L L+ N L TL  
Sbjct: 87  ---------------------LSRLHLSYNKLTSLPPEIGQLTILCELYLSHNHLETLPF 125

Query: 155 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 214
           ++ N     L+   R  L  N+     TT    I    RLS     L L    L+ +P E
Sbjct: 126 TIEN-----LVHISRLSLSYNQ----LTTLPSAIKGLMRLSW----LDLNNNQLTTLPPE 172

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           I +   + +LD+  N +  LPPE+    +L ++ +S NK+   P  I   L +L  L + 
Sbjct: 173 IGQLNSLNQLDVGYNQLTTLPPEIGQLLNLISIDVSYNKLTSLPPEI-GQLLNLDSLTIS 231

Query: 275 NNPLRQVPSD-GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
           NN L  +P + G+  +  L  L+LSYN ++SLP  P    L  L +L L   QL+E P +
Sbjct: 232 NNQLTILPPEIGY--LSNLISLNLSYNKLSSLP--PEIGQLTKLIQLRLSHNQLQELPAE 287

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTS---LTELDLSDNNISALPPEL 379
           I  L QL  L L  N L ++P     L     LT+LDL +N +S +PPE+
Sbjct: 288 IGHLTQLTSLVLKNNQLLTLPFELIQLVQFFKLTQLDLQENLLS-IPPEI 336



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 161/337 (47%), Gaps = 27/337 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  NKLT L +  I     LT L  + N L  +P  IG LS L RL L  N++ S+P 
Sbjct: 44  LDLRNNKLTTLPSE-IGKLINLTSLNLTDNQLTALPPEIGKLSNLSRLHLSYNKLTSLPP 102

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDL 121
            I     L E Y+ +N L  LP  +  L  +  L L  NQL      ++   +RLS LDL
Sbjct: 103 EIGQLTILCELYLSHNHLETLPFTIENLVHISRLSLSYNQLTTLPSAIKGL-MRLSWLDL 161

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
           +NN L+ LPPEIG++ +L +L +  N L TL   +       LL  +   +  N+ +   
Sbjct: 162 NNNQLTTLPPEIGQLNSLNQLDVGYNQLTTLPPEI-----GQLLNLISIDVSYNKLTSLP 216

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
                L+ + +        L++    L+ +P EI     +  L+LS N +  LPPE+   
Sbjct: 217 PEIGQLLNLDS--------LTISNNQLTILPPEIGYLSNLISLNLSYNKLSSLPPEIGQL 268

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI--LDLSY 299
             L  L LS N++++ P A +  L+ L+ L L NN L  +P +  + +   ++  LDL  
Sbjct: 269 TKLIQLRLSHNQLQELP-AEIGHLTQLTSLVLKNNQLLTLPFELIQLVQFFKLTQLDLQE 327

Query: 300 NIASLP-------ENPPFSSLPHLQELYLRRMQLREA 329
           N+ S+P       + P      +L +L  ++  L EA
Sbjct: 328 NLLSIPPEIIWRKDEPDLIVNFYLHQLVEKKQSLNEA 364



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 135/275 (49%), Gaps = 38/275 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S+L +  NKLT L    I   T+L EL  S N L  +P TI +L  + RL L  N++ +
Sbjct: 87  LSRLHLSYNKLTSLPPE-IGQLTILCELYLSHNHLETLPFTIENLVHISRLSLSYNQLTT 145

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVL 119
           +PS+I G   L+   + NN L+ LP E+G+L+ L  LD+  NQL     E  Q L L  +
Sbjct: 146 LPSAIKGLMRLSWLDLNNNQLTTLPPEIGQLNSLNQLDVGYNQLTTLPPEIGQLLNLISI 205

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+S N L+ LPPEIG++  L  L ++ N L  L         P  + YL           
Sbjct: 206 DVSYNKLTSLPPEIGQLLNLDSLTISNNQLTIL---------PPEIGYL----------- 245

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                 +LI+           L+L    LS++P EI +  ++ +L LS N +QELP E+ 
Sbjct: 246 -----SNLIS-----------LNLSYNKLSSLPPEIGQLTKLIQLRLSHNQLQELPAEIG 289

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
               L +L+L  N++   P  ++  +      +LD
Sbjct: 290 HLTQLTSLVLKNNQLLTLPFELIQLVQFFKLTQLD 324



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 112/348 (32%), Positives = 157/348 (45%), Gaps = 66/348 (18%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL   ++ ++P  I    +L    + NN L+ LP+E+GKL  L +L+L  NQL     E
Sbjct: 21  LDLSFKKLETLPPEIGKLTALRYLDLRNNKLTTLPSEIGKLINLTSLNLTDNQLTALPPE 80

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L  LS L LS N L+ LPPEIG++T L +L L+ N L T                  
Sbjct: 81  IGKLSNLSRLHLSYNKLTSLPPEIGQLTILCELYLSHNHLET------------------ 122

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
             LP         T E+L+ ++         LSL    L+ +PS I     ++ LDL+ N
Sbjct: 123 --LP--------FTIENLVHIS--------RLSLSYNQLTTLPSAIKGLMRLSWLDLNNN 164

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LPPE+    SL  L +  N++   P  I   L+ +S                    
Sbjct: 165 QLTTLPPEIGQLNSLNQLDVGYNQLTTLPPEIGQLLNLIS-------------------- 204

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
                +D+SYN + SLP  P    L +L  L +   QL   P +I  L  L  L+LS N 
Sbjct: 205 -----IDVSYNKLTSLP--PEIGQLLNLDSLTISNNQLTILPPEIGYLSNLISLNLSYNK 257

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           L S+P     LT L +L LS N +  LP E+G L   L +L L  N L
Sbjct: 258 LSSLPPEIGQLTKLIQLRLSHNQLQELPAEIGHL-TQLTSLVLKNNQL 304



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 142/298 (47%), Gaps = 42/298 (14%)

Query: 103 QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 162
           +L++   +A + +   LDLS   L  LPPEIGK+T LR L L  N L TL S +      
Sbjct: 5   ELQQVIQQAIEEKAETLDLSFKKLETLPPEIGKLTALRYLDLRNNKLTTLPSEI------ 58

Query: 163 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 222
                                          +++TS  L+L    L+A+P EI +   ++
Sbjct: 59  ----------------------------GKLINLTS--LNLTDNQLTALPPEIGKLSNLS 88

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           +L LS N +  LPPE+     L  L LS N ++  P  I  +L  +S L L  N L  +P
Sbjct: 89  RLHLSYNKLTSLPPEIGQLTILCELYLSHNHLETLPFTI-ENLVHISRLSLSYNQLTTLP 147

Query: 283 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           S   K +  L  LDL+ N + +LP  P    L  L +L +   QL   P +I +L  L  
Sbjct: 148 S-AIKGLMRLSWLDLNNNQLTTLP--PEIGQLNSLNQLDVGYNQLTTLPPEIGQLLNLIS 204

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           +D+S N L S+P     L +L  L +S+N ++ LPPE+G L  +L +L L  N L S+
Sbjct: 205 IDVSYNKLTSLPPEIGQLLNLDSLTISNNQLTILPPEIGYLS-NLISLNLSYNKLSSL 261


>gi|260788624|ref|XP_002589349.1| hypothetical protein BRAFLDRAFT_77802 [Branchiostoma floridae]
 gi|229274526|gb|EEN45360.1| hypothetical protein BRAFLDRAFT_77802 [Branchiostoma floridae]
          Length = 1364

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 183/408 (44%), Gaps = 44/408 (10%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           LN  P+T+  L   + LDL    + SIP  +     L    +  N L+++P  +G+L KL
Sbjct: 4   LNLQPQTVNGL---LTLDLSNQGLTSIPEEVFDITDLEVLDVSKNKLTSIPEAIGRLRKL 60

Query: 95  GTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
             L    N L   +  + + Q +L+ L ++ N L+ LPP I K+  L  L + GN L  +
Sbjct: 61  SRLHADGNMLTSLQQAIGSLQ-KLTHLYVNRNKLTNLPPGIEKLQKLTLLSICGNQLTEV 119

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
            S +          YL   LP  E    S  K              ++L + G  L+ +P
Sbjct: 120 PSGI----------YL---LPNLEFLVVSNNKLTAFNPGVEKLKKLRKLFINGNQLTEVP 166

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
           + +     +  LD+  N +   PP +     L+ L ++ N++ + P  +  SL +L+ L 
Sbjct: 167 AGVCSLPNLELLDVDNNKLSTFPPGVEKLQKLRELYINDNQLTEAPSGV-CSLPNLAVLN 225

Query: 273 LDNNPLRQVPSD---------------GFKDIPMLQILDLSYNIASLPENPPF------- 310
           + NNP+R++P D                F + P  Q+L L   +        F       
Sbjct: 226 VSNNPIRRLPDDVTQLTRLKTLSVRGCQFDEFPR-QVLQLKTLVVLYAGGCKFDIVPDEV 284

Query: 311 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
            SL HLQ L L +  LR  P+ +  +  LR + L  N   + PE    L ++ +LD+S+N
Sbjct: 285 GSLQHLQVLALDKNLLRTLPSTMSHMHNLREVYLHGNKFNTFPEVLCELPAMEKLDISNN 344

Query: 371 NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           NI+ LP  L   +  L+ L + GNPL      + ++GT A+L +LK K
Sbjct: 345 NITRLPTALHRAD-KLEVLDVSGNPLTYPPHDVCEQGTGAILAFLKQK 391



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 125/497 (25%), Positives = 208/497 (41%), Gaps = 91/497 (18%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV+ NKL+      +     L EL  + N L   P  + SL  L  L++  N I  +P 
Sbjct: 178 LDVDNNKLSTFPPG-VEKLQKLRELYINDNQLTEAPSGVCSLPNLAVLNVSNNPIRRLPD 236

Query: 64  SISG----------CCSLAEF-------------YMGNNALSALPAELGKLSKLGTLDL- 99
            ++            C   EF             Y G      +P E+G L  L  L L 
Sbjct: 237 DVTQLTRLKTLSVRGCQFDEFPRQVLQLKTLVVLYAGGCKFDIVPDEVGSLQHLQVLALD 296

Query: 100 ----------------------HSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 136
                                 H N+   +    C+L  +  LD+SNN+++ LP  + + 
Sbjct: 297 KNLLRTLPSTMSHMHNLREVYLHGNKFNTFPEVLCELPAMEKLDISNNNITRLPTALHRA 356

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L  L ++GNPL      +    T A+L +L+ +    E+ +  T +  L    T   +
Sbjct: 357 DKLEVLDVSGNPLTYPPHDVCEQGTGAILAFLKQKA---ENLQLQTVRGCLQVDLTDQGL 413

Query: 197 TS-----------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 245
           TS           + L +    L++IP  I    ++++L    N +  LP  ++S   L 
Sbjct: 414 TSIPEEVFDITDLEVLDVSNNELTSIPEAIGRLHKLSRLHADGNMLTSLPQAIASMLELT 473

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL-SYNIASL 304
            L ++ NK+  +P  +   L  L+ L +++N LR+VP  G   +P L++L + S N+++ 
Sbjct: 474 HLFINDNKLSTFPPGV-EKLQKLAHLFMNDNQLREVPP-GVCSLPNLEVLCVRSNNLSTF 531

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN------ 358
           P  P    L  L+ELY+   QL E P  +  L  L +  +  N L ++P G         
Sbjct: 532 P--PGVEKLQKLRELYIHDNQLTEVPPGLCSLSNLEVFIVINNELSTLPPGMSQLLKLRE 589

Query: 359 -----------------LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
                            L ++ ELD+ +NNI+ LP  L   +  L+ L + GNPL    +
Sbjct: 590 ILLGNNKFDTFPEVLCELPAMEELDIRNNNITRLPTALHRAD-KLKDLDVSGNPLTYPPQ 648

Query: 402 TILDRGTKAVLKYLKDK 418
            +  +GT A++ +LK +
Sbjct: 649 DVCKQGTGAIMAFLKQE 665



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 177/412 (42%), Gaps = 38/412 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL + GN+LT +    + S   L  L    N L+  P  +  L +L  L ++ N++  
Sbjct: 152 LRKLFINGNQLTEVPAG-VCSLPNLELLDVDNNKLSTFPPGVEKLQKLRELYINDNQLTE 210

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
            PS +    +LA   + NN +  LP ++ +L++L TL +   Q  E+  +  QL+ L VL
Sbjct: 211 APSGVCSLPNLAVLNVSNNPIRRLPDDVTQLTRLKTLSVRGCQFDEFPRQVLQLKTLVVL 270

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL----------VNGPTPALLKYLR 169
                    +P E+G +  L+ L L  N LRTL S++          ++G        + 
Sbjct: 271 YAGGCKFDIVPDEVGSLQHLQVLALDKNLLRTLPSTMSHMHNLREVYLHGNKFNTFPEVL 330

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE--------- 220
             LP  E  + S      +  A   +   + L + G  L+  P ++ E G          
Sbjct: 331 CELPAMEKLDISNNNITRLPTALHRADKLEVLDVSGNPLTYPPHDVCEQGTGAILAFLKQ 390

Query: 221 ------------ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
                         ++DL+   +  +P E+     L+ L +S N++   P+AI   L  L
Sbjct: 391 KAENLQLQTVRGCLQVDLTDQGLTSIPEEVFDITDLEVLDVSNNELTSIPEAI-GRLHKL 449

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLPHLQELYLRRMQLR 327
           S L  D N L  +P        ML++  L  N   L   PP    L  L  L++   QLR
Sbjct: 450 SRLHADGNMLTSLPQ---AIASMLELTHLFINDNKLSTFPPGVEKLQKLAHLFMNDNQLR 506

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
           E P  +  L  L +L +  N+L + P G + L  L EL + DN ++ +PP L
Sbjct: 507 EVPPGVCSLPNLEVLCVRSNNLSTFPPGVEKLQKLRELYIHDNQLTEVPPGL 558



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 79/162 (48%), Gaps = 2/162 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S+L  +GN LT L    IAS   LT L  + N L+  P  +  L +L  L ++ N++  
Sbjct: 449 LSRLHADGNMLTSLPQ-AIASMLELTHLFINDNKLSTFPPGVEKLQKLAHLFMNDNQLRE 507

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  +    +L    + +N LS  P  + KL KL  L +H NQL E     C L  L V 
Sbjct: 508 VPPGVCSLPNLEVLCVRSNNLSTFPPGVEKLQKLRELYIHDNQLTEVPPGLCSLSNLEVF 567

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 161
            + NN LS LPP + ++  LR++LL  N   T    L   P 
Sbjct: 568 IVINNELSTLPPGMSQLLKLREILLGNNKFDTFPEVLCELPA 609



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 10/178 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           + S   L  L    N L+  P  +  L +L  L +H N++  +P  +    +L  F + N
Sbjct: 512 VCSLPNLEVLCVRSNNLSTFPPGVEKLQKLRELYIHDNQLTEVPPGLCSLSNLEVFIVIN 571

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N LS LP  + +L KL  + L +N+   +    C+L  +  LD+ NN+++ LP  + +  
Sbjct: 572 NELSTLPPGMSQLLKLREILLGNNKFDTFPEVLCELPAMEELDIRNNNITRLPTALHRAD 631

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL---------PENEDSEASTTKED 186
            L+ L ++GNPL      +    T A++ +L+            PE + S A    ED
Sbjct: 632 KLKDLDVSGNPLTYPPQDVCKQGTGAIMAFLKQEAEKEGTKKARPEEKGSAAGKATED 689


>gi|403259517|ref|XP_003922256.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Saimiri boliviensis
           boliviensis]
          Length = 582

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 194/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LS+L  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSRLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  ++ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 283 --------------LSSLNR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSRLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLNRLGLRYNRLSAIPRSL 303



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 149/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534


>gi|326921749|ref|XP_003207118.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387 homolog [Meleagris gallopavo]
          Length = 1287

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 192/402 (47%), Gaps = 20/402 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +  +  NKL  L+  L    T L  L A  N L  + + + +L  L  L+L +N   S
Sbjct: 335 LQEFSISHNKLIFLAVQLF-QLTKLKGLRADDNKLEFLSDKVENLRELTFLNLSKNLFKS 393

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           I  ++  C  L    + +N L+ LPA + +L  L  L L+ NQL     +   L+ LS +
Sbjct: 394 ITDNLCNCTMLKHLVLCDNQLTQLPANIHRLKHLKELSLNRNQLHSLVEQISHLKDLSKI 453

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +LS N L+ +P E+     + K  L+ N L    + +      + LKYL   L  N  SE
Sbjct: 454 ELSGNVLTYIPVELKTCIRITKADLSNNKLSQFPNVVC---ALSDLKYLN--LSGNSISE 508

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                 D+  +        + L L+   LS+  + +    ++  LD+S N I  +P  +S
Sbjct: 509 LIPGISDIKDL--------EHLELKKNKLSSFSACLCSLTKLVYLDVSENEINSMPAVVS 560

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +LQ L+L  NK   +P+  L SL  L  L + NN ++ +P     ++ M++ L++S 
Sbjct: 561 EMKALQVLLLHHNKFDSFPEE-LCSLKGLKTLDISNNQIKDIPLK-ISNLEMIKDLNVSN 618

Query: 300 N-IASLP-ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
           N  AS P E    SSL  L    +  ++L + P ++ +L  LR LD+S N+L+ +P+   
Sbjct: 619 NQFASFPSEICLLSSLEKLTVCQVNGLKLTKIPEELSKLVSLRELDISHNALKEMPDSIG 678

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            L  L  L  ++N IS LP  +  L  SLQ L L  N LR +
Sbjct: 679 ELKFLVHLIANNNEISQLPKSITSLR-SLQHLDLSENRLRYL 719



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 182/376 (48%), Gaps = 21/376 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L++  N    +++NL  + TML  L+   N L  +P  I  L  L  L L++N++ S
Sbjct: 381 LTFLNLSKNLFKSITDNL-CNCTMLKHLVLCDNQLTQLPANIHRLKHLKELSLNRNQLHS 439

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +   IS    L++  +  N L+ +P EL    ++   DL +N+L ++    C L  L  L
Sbjct: 440 LVEQISHLKDLSKIELSGNVLTYIPVELKTCIRITKADLSNNKLSQFPNVVCALSDLKYL 499

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +LS NS+S L P I  +  L  L L  N L +  + L      +L K +   + ENE + 
Sbjct: 500 NLSGNSISELIPGISDIKDLEHLELKKNKLSSFSACLC-----SLTKLVYLDVSENEINS 554

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                 ++  +   L        L      + P E+     +  LD+S N I+++P ++S
Sbjct: 555 MPAVVSEMKALQVLL--------LHHNKFDSFPEELCSLKGLKTLDISNNQIKDIPLKIS 606

Query: 240 SCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           +   ++ L +S N+   +P  I  L+SL  L+  +++   L ++P +    +  L+ LD+
Sbjct: 607 NLEMIKDLNVSNNQFASFPSEICLLSSLEKLTVCQVNGLKLTKIPEE-LSKLVSLRELDI 665

Query: 298 SYNIASLPENP-PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
           S+N  +L E P     L  L  L     ++ + P  I  L+ L+ LDLS+N L+ +P G 
Sbjct: 666 SHN--ALKEMPDSIGELKFLVHLIANNNEISQLPKSITSLRSLQHLDLSENRLRYLPAGL 723

Query: 357 KNLTSLTELDLSDNNI 372
           ++L  L +++   N++
Sbjct: 724 RHLYLLKDINFDGNSL 739



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 181/386 (46%), Gaps = 24/386 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++ GNKL  L + +I     L  L    N ++  P  +  L  L+ L L +N I S
Sbjct: 266 LETLELAGNKLKTLPDAMI-DMKNLKVLNIDSNQISIFPRVLCYLPNLVNLSLCENFIQS 324

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I     L EF + +N L  L  +L +L+KL  L    N+L+    +   LR L+ L
Sbjct: 325 LPKDIKELKKLQEFSISHNKLIFLAVQLFQLTKLKGLRADDNKLEFLSDKVENLRELTFL 384

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +LS N    +   +   T L+ L+L  N L  L +++        LK+L+         E
Sbjct: 385 NLSKNLFKSITDNLCNCTMLKHLVLCDNQLTQLPANIHR------LKHLK---------E 429

Query: 180 ASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
            S  +  L ++  ++S      ++ L G  L+ IP E+     ITK DLS N + + P  
Sbjct: 430 LSLNRNQLHSLVEQISHLKDLSKIELSGNVLTYIPVELKTCIRITKADLSNNKLSQFPNV 489

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           + + + L+ L LS N I +    I + +  L  L+L  N L    S     +  L  LD+
Sbjct: 490 VCALSDLKYLNLSGNSISELIPGI-SDIKDLEHLELKKNKLSSF-SACLCSLTKLVYLDV 547

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
           S N I S+P     S +  LQ L L   +    P ++  L+ L+ LD+S N ++ IP   
Sbjct: 548 SENEINSMP--AVVSEMKALQVLLLHHNKFDSFPEELCSLKGLKTLDISNNQIKDIPLKI 605

Query: 357 KNLTSLTELDLSDNNISALPPELGLL 382
            NL  + +L++S+N  ++ P E+ LL
Sbjct: 606 SNLEMIKDLNVSNNQFASFPSEICLL 631



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 157/335 (46%), Gaps = 22/335 (6%)

Query: 47  RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 106
           R   L L    +  +P S S   ++    + NN +  L      LS L  L L  N+L  
Sbjct: 153 RNFTLRLSDKGLQDVPQSASESQNVKTLLLQNNEIKTLRLNTVNLSNLEILILERNRLTL 212

Query: 107 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
              E   L +L VL++S+N LS LP E+ K+  +++L L  N +            P  L
Sbjct: 213 LPPEISLLHKLKVLNVSHNQLSCLPEELSKLVNIKELFLNHNSIDEF---------PFAL 263

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
           K L +   E   ++  T  + +I M        K L+++   +S  P  +     +  L 
Sbjct: 264 KSLETL--ELAGNKLKTLPDAMIDMKNL-----KVLNIDSNQISIFPRVLCYLPNLVNLS 316

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           L  N IQ LP ++     LQ   +S NK+  +    L  L+ L  L+ D+N L +  SD 
Sbjct: 317 LCENFIQSLPKDIKELKKLQEFSISHNKLI-FLAVQLFQLTKLKGLRADDNKL-EFLSDK 374

Query: 286 FKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
            +++  L  L+LS N+  S+ +N    +   L+ L L   QL + P +I RL+ L+ L L
Sbjct: 375 VENLRELTFLNLSKNLFKSITDN--LCNCTMLKHLVLCDNQLTQLPANIHRLKHLKELSL 432

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
           ++N L S+ E   +L  L++++LS N ++ +P EL
Sbjct: 433 NRNQLHSLVEQISHLKDLSKIELSGNVLTYIPVEL 467



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 152/354 (42%), Gaps = 44/354 (12%)

Query: 44  SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 103
           +LS L  L L +NR+  +P  IS    L    + +N LS LP EL KL  +  L L+ N 
Sbjct: 196 NLSNLEILILERNRLTLLPPEISLLHKLKVLNVSHNQLSCLPEELSKLVNIKELFLNHNS 255

Query: 104 LKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 163
           + E+      L    L+L+ N L  LP  +  M  L+ L +  N +            P 
Sbjct: 256 IDEFPFALKSLE--TLELAGNKLKTLPDAMIDMKNLKVLNIDSNQISIF---------PR 304

Query: 164 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 223
           +L YL + +                            LSL    + ++P +I E  ++ +
Sbjct: 305 VLCYLPNLV---------------------------NLSLCENFIQSLPKDIKELKKLQE 337

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
             +S N +  L  +L     L+ L    NK++   D +  +L  L+ L L  N  + + +
Sbjct: 338 FSISHNKLIFLAVQLFQLTKLKGLRADDNKLEFLSDKV-ENLRELTFLNLSKNLFKSI-T 395

Query: 284 DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 342
           D   +  ML+ L L  N +  LP N     L HL+EL L R QL      I  L+ L  +
Sbjct: 396 DNLCNCTMLKHLVLCDNQLTQLPAN--IHRLKHLKELSLNRNQLHSLVEQISHLKDLSKI 453

Query: 343 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           +LS N L  IP   K    +T+ DLS+N +S  P  +  L   L+ L L GN +
Sbjct: 454 ELSGNVLTYIPVELKTCIRITKADLSNNKLSQFPNVVCALS-DLKYLNLSGNSI 506



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 143/317 (45%), Gaps = 53/317 (16%)

Query: 115 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL-- 172
           R   L LS+  L  +P    +   ++ LLL  N ++TLR + VN     +L   R+RL  
Sbjct: 153 RNFTLRLSDKGLQDVPQSASESQNVKTLLLQNNEIKTLRLNTVNLSNLEILILERNRLTL 212

Query: 173 --PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
             PE             I++  +L V    L++    LS +P E+ +   I +L L+ NS
Sbjct: 213 LPPE-------------ISLLHKLKV----LNVSHNQLSCLPEELSKLVNIKELFLNHNS 255

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           I E P  L    SL+TL L+ NK+K  PDA++  + +L  L +D+N +   P      +P
Sbjct: 256 IDEFPFALK---SLETLELAGNKLKTLPDAMI-DMKNLKVLNIDSNQISIFPR-VLCYLP 310

Query: 291 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR--------- 340
            L  L L  N I SLP++     L  LQE  +   +L      + +L +L+         
Sbjct: 311 NLVNLSLCENFIQSLPKD--IKELKKLQEFSISHNKLIFLAVQLFQLTKLKGLRADDNKL 368

Query: 341 --------------ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
                          L+LS+N  +SI +   N T L  L L DN ++ LP  +  L+  L
Sbjct: 369 EFLSDKVENLRELTFLNLSKNLFKSITDNLCNCTMLKHLVLCDNQLTQLPANIHRLK-HL 427

Query: 387 QALRLDGNPLRSIRRTI 403
           + L L+ N L S+   I
Sbjct: 428 KELSLNRNQLHSLVEQI 444



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 1/108 (0%)

Query: 6   VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
           V G KLT +   L +    L EL  S N L  MP++IG L  L+ L  + N I  +P SI
Sbjct: 642 VNGLKLTKIPEEL-SKLVSLRELDISHNALKEMPDSIGELKFLVHLIANNNEISQLPKSI 700

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 113
           +   SL    +  N L  LPA L  L  L  ++   N L E   + C+
Sbjct: 701 TSLRSLQHLDLSENRLRYLPAGLRHLYLLKDINFDGNSLFEPLQDICK 748



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 4/101 (3%)

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           +L +L+ L L R +L   P +I  L +L++L++S N L  +PE    L ++ EL L+ N+
Sbjct: 196 NLSNLEILILERNRLTLLPPEISLLHKLKVLNVSHNQLSCLPEELSKLVNIKELFLNHNS 255

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVL 412
           I   P  L     SL+ L L GN L+++   ++D     VL
Sbjct: 256 IDEFPFAL----KSLETLELAGNKLKTLPDAMIDMKNLKVL 292


>gi|395528204|ref|XP_003766221.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4,
           partial [Sarcophilus harrisii]
          Length = 558

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 176/409 (43%), Gaps = 69/409 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I + T L E+    N     P+ +  L  L  LDL QN+I  IP  IS   +L +F++ +
Sbjct: 167 IVNQTKLKEIYLQNNNFEEFPQELCVLYNLEILDLEQNQISFIPDEISALINLEKFFIAS 226

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N +  LP  LG  SKL                       VLD+SNN L  LP  + ++T 
Sbjct: 227 NCIPLLPDTLGSCSKL----------------------MVLDVSNNFLHNLPSTLKELTE 264

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           + +L L+GN L                     ++P+            LI   T L +  
Sbjct: 265 ITELGLSGNCLE--------------------KVPK------------LICKWTLLHL-- 290

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
             L ++ + L ++         +T LDLS+N ++  P E+ S  +L+ L L  N I   P
Sbjct: 291 --LYMKNICLKSLRRSFKRLLNVTLLDLSQNYLERFPLEVCSLKNLEMLALDDNNICQIP 348

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPS-----DGFKDIPMLQILDLSYNIASLPENPPFSSL 313
             +  +L  L  L L  N     P      D  +++ M Q  D    I SLPE      L
Sbjct: 349 QEVF-NLVKLKGLSLTGNNFSAFPEEILLIDSLEELYMGQ--DQGAKITSLPET--ILKL 403

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
            +L+ELY     L   P  +  L+ L+ILD   N +  +P+    LT L  L+L +N ++
Sbjct: 404 TNLKELYFENNSLDSLPVGLCSLKNLKILDFHNNQITELPDSISQLTGLKTLNLENNLLT 463

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
            LP  +  LE  L+ L L+GNP++     I       + +YLKDK  +N
Sbjct: 464 ILPERMDSLE-HLEVLNLEGNPMQDPSPEICRLDIPEIWQYLKDKRYKN 511



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 170/358 (47%), Gaps = 22/358 (6%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           +D     +  IPSS+     L E ++ NN +  +  E+  L+ L  L L++N+++  C +
Sbjct: 36  MDASNKNLTFIPSSVLELWELEEVHLENNVIEGIAKEIRGLTNLKILYLNNNEIRLICKD 95

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L  L  LDLS N L  +P  +  ++ LR L      LR  +  + N P   + K L 
Sbjct: 96  LGELTNLQSLDLSGNPL--VPSSLLILSHLRSL----RQLRLYKVQMENFPI-QICKCLH 148

Query: 170 S--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
               L  + +   S  KE  I   T+L    KE+ L+  N    P E+     +  LDL 
Sbjct: 149 HLELLGLSHNKLKSLPKE--IVNQTKL----KEIYLQNNNFEEFPQELCVLYNLEILDLE 202

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
           +N I  +P E+S+  +L+   ++ N I   PD  L S S L  L + NN L  +PS   K
Sbjct: 203 QNQISFIPDEISALINLEKFFIASNCIPLLPDT-LGSCSKLMVLDVSNNFLHNLPS-TLK 260

Query: 288 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
           ++  +  L LS N +  +P+     +L HL  LY++ + L+       RL  + +LDLSQ
Sbjct: 261 ELTEITELGLSGNCLEKVPKLICKWTLLHL--LYMKNICLKSLRRSFKRLLNVTLLDLSQ 318

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
           N L+  P    +L +L  L L DNNI  +P E+  L   L+ L L GN   +    IL
Sbjct: 319 NYLERFPLEVCSLKNLEMLALDDNNICQIPQEVFNL-VKLKGLSLTGNNFSAFPEEIL 375



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 1/108 (0%)

Query: 7   EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 66
           +G K+T L    I   T L EL    N L+ +P  + SL  L  LD H N+I  +P SIS
Sbjct: 389 QGAKITSLPET-ILKLTNLKELYFENNSLDSLPVGLCSLKNLKILDFHNNQITELPDSIS 447

Query: 67  GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 114
               L    + NN L+ LP  +  L  L  L+L  N +++   E C+L
Sbjct: 448 QLTGLKTLNLENNLLTILPERMDSLEHLEVLNLEGNPMQDPSPEICRL 495


>gi|340713142|ref|XP_003395107.1| PREDICTED: protein lap4-like isoform 3 [Bombus terrestris]
          Length = 2051

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 181/389 (46%), Gaps = 43/389 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL+   N +  +P+    L +L +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +  L  L   D  SN +        QLR L+VL L++ SL+ LPP+ G +  L+ L 
Sbjct: 99  PENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L++L  SL       L K  R  L +N                            
Sbjct: 159 LRENLLKSLPESLSQ-----LYKLERLDLGDN---------------------------- 185

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
              ++  +P+ I +   + +L L  N +Q LPPE+    +L  L +S N+++D P+ I  
Sbjct: 186 ---DIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEI-G 241

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
            L SL+ L L  N + ++P DG  ++  L IL +  N +++L  N       +LQEL L 
Sbjct: 242 GLESLTDLHLSQNVIEKLP-DGLGELQKLTILKVDQNRLSTLNSN--IGRCENLQELILT 298

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
              L E P  I +L  L  L++ +NSLQS+P    NL  L  L L DN +  LP E+G  
Sbjct: 299 ENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQC 358

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAV 411
             +L  L + GN L+ +  ++++   KAV
Sbjct: 359 T-ALHVLDVSGNRLQYLPYSLINLNLKAV 386



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 5/192 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S + +EL L+  ++  +P   +   ++ KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRSLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D P+ I  +L +L      +NP+ ++P+ GF  +  L +L L+  ++ +LP  P F 
Sbjct: 94  DIPDIPENI-KNLRALQVADFSSNPIPRLPA-GFVQLRNLTVLGLNDMSLTNLP--PDFG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  LQ L LR   L+  P  + +L +L  LDL  N ++ +P     L +L EL L  N 
Sbjct: 150 SLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQ 209

Query: 372 ISALPPELGLLE 383
           +  LPPE+G L+
Sbjct: 210 LQHLPPEIGELK 221



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 151/342 (44%), Gaps = 40/342 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +PE I +L  L   D   N I  +P+      +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LP + G L  L +L+L  N LK       QL +L  LDL +N +  LP  IGK+ 
Sbjct: 139 MSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L++L L  N L+ L   +    T A L    +RL            EDL      L   
Sbjct: 199 ALQELWLDHNQLQHLPPEIGELKTLACLDVSENRL------------EDLPEEIGGLESL 246

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           + +L L    +  +P  + E  ++T L + +N +  L   +  C +LQ LIL+ N + + 
Sbjct: 247 T-DLHLSQNVIEKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLEL 305

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P   +  L +L+ L +D N L+ +P++                           +L  L 
Sbjct: 306 P-VTIGKLHNLNNLNVDRNSLQSLPTE-------------------------IGNLKQLG 339

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            L LR  +L+  P ++ +   L +LD+S N LQ +P    NL
Sbjct: 340 VLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINL 381



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L V+ N+L+ L++N I     L ELI ++N L  +P TIG L  L  L++ +N + S+P+
Sbjct: 272 LKVDQNRLSTLNSN-IGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPT 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I     L    + +N L  LP E+G+ + L  LD+  N+L+        L L  + LS 
Sbjct: 331 EIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINLNLKAVWLSK 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|354497491|ref|XP_003510853.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Cricetulus griseus]
 gi|344249840|gb|EGW05944.1| Leucine-rich repeat protein SHOC-2 [Cricetulus griseus]
          Length = 582

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 195/406 (48%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L   L     ++T L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAELGCLLNLMT-LALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  +    SL   Y+  N ++A+  ++  L KL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPPVVYRLDSLTTLYLRFNRITAVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  ++ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 283 --------------LSSLNR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++ A+P  + E  ++T+L L  N +Q LP EL    +L TL LS N +   
Sbjct: 102 SARLDLSKRSIHALPPSVKELTQLTELYLYSNKLQSLPAELGCLLNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++P   ++ +  L  L L +N  +  E     +LP L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPPVVYR-LDSLTTLYLRFNRITAVEK-DIKNLPKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLNRLGLRYNRLSAIPRSL 303



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 149/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534


>gi|418702924|ref|ZP_13263816.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410767468|gb|EKR38143.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 358

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 162/376 (43%), Gaps = 85/376 (22%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           LI S+  L  +PE IG L  L  LDL  N+++ +P  I    +L E ++  N     P E
Sbjct: 32  LILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKE 91

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 147
           + +L       LH                  L LSNN L+ LP EIG++  L++L L  N
Sbjct: 92  IEQLK-----SLHK-----------------LYLSNNQLTILPVEIGQLQNLQELNLWNN 129

Query: 148 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 207
            L+T+   +                            E L  +        ++L L+   
Sbjct: 130 QLKTISKEI----------------------------EQLKNL--------QKLYLDNNQ 153

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+A P EI +   + +L LS N +   P E+    +LQ L LS N++  +P  I   L  
Sbjct: 154 LTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI-GKLQK 212

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L  L L +N L  +P++                            L  LQEL L   QL 
Sbjct: 213 LQWLGLGDNQLTTIPNE-------------------------IGKLQKLQELNLDVNQLT 247

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
             P +I +LQ L++L LS N  ++IP  F  L +L  L L  N ++ALP E+G L+ +L+
Sbjct: 248 TIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLK-NLK 306

Query: 388 ALRLDGNPLRSIRRTI 403
            L LD N L +I + I
Sbjct: 307 MLNLDANQLITIPKEI 322



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 143/300 (47%), Gaps = 23/300 (7%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N L  +P+ I  L  L  L L+ N+  + P  I    SL + Y+ NN L+ LP E+G+
Sbjct: 58  SDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQ 117

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  L+L +NQLK    E  QL+ L  L L NN L+  P EIGK+  L++L L+ N L
Sbjct: 118 LQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQL 177

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMN 207
            T    +  G    L              E   +   L T    +    K   L L    
Sbjct: 178 TTFPKEI--GKLQNL-------------QELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQ 222

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+ IP+EI +  ++ +L+L  N +  +P E+    +LQ L LS N+ K  P      L +
Sbjct: 223 LTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIP-VEFGQLKN 281

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L LD N L  +P +  K +  L++L+L  N + ++P+      L +LQ LYLR  Q 
Sbjct: 282 LKMLSLDANQLTALPKEIGK-LKNLKMLNLDANQLITIPK--EIGQLQNLQTLYLRNNQF 338



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 128/289 (44%), Gaps = 39/289 (13%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  S N L  +P  IG L  L  L+L  N++ +I   I    +L + Y+ N
Sbjct: 92  IEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDN 151

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+A P E+GKL  L  L L +NQL  +  E  +L+ L  L LSNN L+  P EIGK+ 
Sbjct: 152 NQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQ 211

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L+ L L  N L T+ + +  G    L                                 
Sbjct: 212 KLQWLGLGDNQLTTIPNEI--GKLQKL--------------------------------- 236

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL+L+   L+ IP EI +   +  L LS N  + +P E     +L+ L L  N++   
Sbjct: 237 -QELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTAL 295

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 306
           P  I   L +L  L LD N L  +P +    +  LQ L L  N  S+ E
Sbjct: 296 PKEI-GKLKNLKMLNLDANQLITIPKE-IGQLQNLQTLYLRNNQFSIEE 342



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 114/255 (44%), Gaps = 38/255 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  N+L  +S   I     L +L    N L   P+ IG L  L  L L  N++ +
Sbjct: 121 LQELNLWNNQLKTISKE-IEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTT 179

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
            P  I    +L E Y+ NN L+  P E+GKL KL  L L  NQL     E  +L +L  L
Sbjct: 180 FPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQEL 239

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L  N L+ +P EIG++  L+ L L+ N  +T+         P     L++         
Sbjct: 240 NLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTI---------PVEFGQLKNL-------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              K LSL+   L+A+P EI +   +  L+L  N +  +P E+ 
Sbjct: 283 -------------------KMLSLDANQLTALPKEIGKLKNLKMLNLDANQLITIPKEIG 323

Query: 240 SCASLQTLILSRNKI 254
              +LQTL L  N+ 
Sbjct: 324 QLQNLQTLYLRNNQF 338



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 109/212 (51%), Gaps = 4/212 (1%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L    L A+P +I +   +  LDLS N +  LP E+    +LQ L
Sbjct: 19  LTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 78

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 307
            L+ N+ K +P  I   L SL  L L NN L  +P +    +  LQ L+L +N      +
Sbjct: 79  FLNYNQFKTFPKEI-EQLKSLHKLYLSNNQLTILPVE-IGQLQNLQELNL-WNNQLKTIS 135

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                L +LQ+LYL   QL   P +I +LQ L+ L LS N L + P+    L +L EL L
Sbjct: 136 KEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQNLQELYL 195

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           S+N ++  P E+G L+  LQ L L  N L +I
Sbjct: 196 SNNQLTTFPKEIGKLQ-KLQWLGLGDNQLTTI 226


>gi|350417073|ref|XP_003491243.1| PREDICTED: protein lap4-like isoform 1 [Bombus impatiens]
          Length = 2050

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 181/389 (46%), Gaps = 43/389 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL+   N +  +P+    L +L +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +  L  L   D  SN +        QLR L+VL L++ SL+ LPP+ G +  L+ L 
Sbjct: 99  PENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L++L  SL       L K  R  L +N                            
Sbjct: 159 LRENLLKSLPESLSQ-----LYKLERLDLGDN---------------------------- 185

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
              ++  +P+ I +   + +L L  N +Q LPPE+    +L  L +S N+++D P+ I  
Sbjct: 186 ---DIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEI-G 241

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
            L SL+ L L  N + ++P DG  ++  L IL +  N +++L  N       +LQEL L 
Sbjct: 242 GLESLTDLHLSQNVIEKLP-DGLGELQKLTILKVDQNRLSTLNSN--IGRCENLQELILT 298

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
              L E P  I +L  L  L++ +NSLQS+P    NL  L  L L DN +  LP E+G  
Sbjct: 299 ENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQC 358

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAV 411
             +L  L + GN L+ +  ++++   KAV
Sbjct: 359 T-ALHVLDVSGNRLQYLPYSLINLNLKAV 386



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 5/192 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S + +EL L+  ++  +P   +   ++ KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRSLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D P+ I  +L +L      +NP+ ++P+ GF  +  L +L L+  ++ +LP  P F 
Sbjct: 94  DIPDIPENI-KNLRALQVADFSSNPIPRLPA-GFVQLRNLTVLGLNDMSLTNLP--PDFG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  LQ L LR   L+  P  + +L +L  LDL  N ++ +P     L +L EL L  N 
Sbjct: 150 SLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQ 209

Query: 372 ISALPPELGLLE 383
           +  LPPE+G L+
Sbjct: 210 LQHLPPEIGELK 221



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 151/342 (44%), Gaps = 40/342 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +PE I +L  L   D   N I  +P+      +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LP + G L  L +L+L  N LK       QL +L  LDL +N +  LP  IGK+ 
Sbjct: 139 MSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L++L L  N L+ L   +    T A L    +RL            EDL      L   
Sbjct: 199 ALQELWLDHNQLQHLPPEIGELKTLACLDVSENRL------------EDLPEEIGGLESL 246

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           + +L L    +  +P  + E  ++T L + +N +  L   +  C +LQ LIL+ N + + 
Sbjct: 247 T-DLHLSQNVIEKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLEL 305

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P   +  L +L+ L +D N L+ +P++                           +L  L 
Sbjct: 306 P-VTIGKLHNLNNLNVDRNSLQSLPTE-------------------------IGNLKQLG 339

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            L LR  +L+  P ++ +   L +LD+S N LQ +P    NL
Sbjct: 340 VLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINL 381



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L V+ N+L+ L++N I     L ELI ++N L  +P TIG L  L  L++ +N + S+P+
Sbjct: 272 LKVDQNRLSTLNSN-IGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPT 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I     L    + +N L  LP E+G+ + L  LD+  N+L+        L L  + LS 
Sbjct: 331 EIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINLNLKAVWLSK 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|418668202|ref|ZP_13229605.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756059|gb|EKR17686.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 378

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 163/376 (43%), Gaps = 85/376 (22%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           LI S+  L  +PE IG L  L  LDL  N+++ +P  I    +L E ++  N L+  P E
Sbjct: 52  LILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKE 111

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 147
           + +L       LH                  L LSNN L+ LP EIG++  L++L L  N
Sbjct: 112 IEQLK-----SLHK-----------------LYLSNNQLTILPVEIGQLQNLQELNLWNN 149

Query: 148 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 207
            L+T+   +                            E L  +        ++L L+   
Sbjct: 150 QLKTISKEI----------------------------EQLKNL--------QKLYLDNNQ 173

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+A P EI +   +  L LS N +   P E+    +LQ L LS N++  +P  I   L  
Sbjct: 174 LTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI-GKLQK 232

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L  L L +N L  +P++                            L  LQEL L   QL 
Sbjct: 233 LQWLGLGDNQLTTIPNE-------------------------IGKLQKLQELNLDVNQLT 267

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
             P +I +LQ L++L LS N  ++IP  F  L +L  L L  N ++ALP E+G L+ +L+
Sbjct: 268 TIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLK-NLK 326

Query: 388 ALRLDGNPLRSIRRTI 403
            L LD N L +I + I
Sbjct: 327 MLNLDANQLTTIPKEI 342



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 144/300 (48%), Gaps = 23/300 (7%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N L  +P+ I  L  L  L L+ N++ + P  I    SL + Y+ NN L+ LP E+G+
Sbjct: 78  SDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQ 137

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  L+L +NQLK    E  QL+ L  L L NN L+  P EIGK+  L+ L L+ N L
Sbjct: 138 LQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQL 197

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMN 207
            T    +  G    L              E   +   L T    +    K   L L    
Sbjct: 198 TTFPKEI--GKLQNL-------------QELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQ 242

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+ IP+EI +  ++ +L+L  N +  +P E+    +LQ L LS N+ K  P      L +
Sbjct: 243 LTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIP-VEFGQLKN 301

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L LD N L  +P +  K +  L++L+L  N + ++P+      L +LQ LYLR  QL
Sbjct: 302 LKMLSLDANQLTALPKEIGK-LKNLKMLNLDANQLTTIPK--EIGQLQNLQTLYLRNNQL 358



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 134/300 (44%), Gaps = 43/300 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+LT      I     L +L  S N L  +P  IG L  L  L+L  N++ +
Sbjct: 95  LQELFLNYNQLTTFPKE-IEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKT 153

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           I   I    +L + Y+ NN L+A P E+GKL  L +L L +NQL  +  E  +L+ L  L
Sbjct: 154 ISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQEL 213

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LSNN L+  P EIGK+  L+ L L  N L T+ + +  G    L               
Sbjct: 214 YLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEI--GKLQKL--------------- 256

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              +EL+L+   L+ IP EI +   +  L LS N  + +P E  
Sbjct: 257 -------------------QELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFG 297

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+ L L  N++   P  I   L +L  L LD N L  +P    K+I  LQ L   Y
Sbjct: 298 QLKNLKMLSLDANQLTALPKEI-GKLKNLKMLNLDANQLTTIP----KEIGQLQNLQTLY 352



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 115/255 (45%), Gaps = 38/255 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  N+L  +S   I     L +L    N L   P+ IG L  L  L L  N++ +
Sbjct: 141 LQELNLWNNQLKTISKE-IEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTT 199

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
            P  I    +L E Y+ NN L+  P E+GKL KL  L L  NQL     E  +L +L  L
Sbjct: 200 FPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQEL 259

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L  N L+ +P EIG++  L+ L L+ N  +T+         P     L++         
Sbjct: 260 NLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTI---------PVEFGQLKNL-------- 302

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              K LSL+   L+A+P EI +   +  L+L  N +  +P E+ 
Sbjct: 303 -------------------KMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIG 343

Query: 240 SCASLQTLILSRNKI 254
              +LQTL L  N++
Sbjct: 344 QLQNLQTLYLRNNQL 358



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 108/212 (50%), Gaps = 4/212 (1%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L    L  +P +I +   +  LDLS N +  LP E+    +LQ L
Sbjct: 39  LTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 98

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 307
            L+ N++  +P  I   L SL  L L NN L  +P +    +  LQ L+L +N      +
Sbjct: 99  FLNYNQLTTFPKEI-EQLKSLHKLYLSNNQLTILPVE-IGQLQNLQELNL-WNNQLKTIS 155

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                L +LQ+LYL   QL   P +I +LQ L+ L LS N L + P+    L +L EL L
Sbjct: 156 KEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYL 215

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           S+N ++  P E+G L+  LQ L L  N L +I
Sbjct: 216 SNNQLTTFPKEIGKLQ-KLQWLGLGDNQLTTI 246


>gi|126273103|ref|XP_001368489.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Monodelphis
           domestica]
          Length = 582

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 193/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG    +  L L  N L  L                    PE   + 
Sbjct: 244 DVAHNQLEHLPKEIGTCIQITNLDLQHNELLDL--------------------PETIGNL 283

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
           +S  +                L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 284 SSLNR----------------LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEGLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS  +L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVNLNSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLAKIPEDVSGLVSLEVLILSNNVLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLNNLPRGI 490



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLI 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+       +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGTCIQITNLDLQHNELLDLPE 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLNRLGLRYNRLSAIPRSL 303



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLAKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNVLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLNNLPRGIGHLTNLTHLGLGENLLAHL 509


>gi|242046482|ref|XP_002399506.1| lumican, putative [Ixodes scapularis]
 gi|215497547|gb|EEC07041.1| lumican, putative [Ixodes scapularis]
          Length = 546

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 134/431 (31%), Positives = 205/431 (47%), Gaps = 24/431 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  N LT L + L A    L  L    N LN +PE +  L+ L  L L  NRI  
Sbjct: 110 LQTLALSENSLTSLPDTL-AHLRQLRVLDLRHNKLNEIPEVVYRLTSLTTLFLRFNRIRE 168

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVL 119
           +  +I+   +L    +  N +  LPA +GKL++L T D  +NQLK    E    ++LS L
Sbjct: 169 VGDNIANLTNLTMLSLRENKIRELPAGIGKLTQLITFDASNNQLKHLPTEIGNCVQLSTL 228

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLL--TGNPLRTLRSSL---VNGPTPALLKYLRSRLPE 174
           D+ +N L  +P  IG +  L +L L    N L ++  SL   VN     +   L S+LPE
Sbjct: 229 DVQHNELIDIPETIGNLKVLTRLGLRQVYNQLTSVPKSLSNCVNMTDFNVESNLVSQLPE 288

Query: 175 NEDSEASTTKEDLITMATRLS---------VTSKELSLEGMNLSAIPSEIW-EAGEITKL 224
              S  S      ++     S          +   +++E   ++ IP  I+  A  +TKL
Sbjct: 289 GLLSSFSNLSSLTLSRNNFTSYPVGGPSQFCSVYAINMEHNQINKIPFGIFSRARNLTKL 348

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           ++  N +  LP ++ +  ++  L L  N++   PD I   L SL  L L NN LR++P  
Sbjct: 349 NMKDNQLTSLPLDMGTWTNMVELNLGTNQLSKVPDDI-QYLQSLEVLTLSNNLLRRLPPT 407

Query: 285 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
               +  L++LDL  N + +LP       L  LQ+L  +  QL   P  I  L  L  L 
Sbjct: 408 -IGSLAKLRVLDLEENRLDALPNE--IGMLRELQKLVAQSNQLSSLPRAIGHLSNLTYLG 464

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRT 402
           + +N+L  IPE    L SL  L ++DN N+ +LP EL L   +LQ + ++  PL  I   
Sbjct: 465 VGENNLNFIPEEIGTLDSLESLYINDNPNLHSLPFELALCS-NLQIMSIENCPLSQIPPE 523

Query: 403 ILDRGTKAVLK 413
           I++ G   V++
Sbjct: 524 IVNGGPSLVIQ 534



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 179/404 (44%), Gaps = 44/404 (10%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
           RLDL ++ I  +PSS+     L EFY+  N L+ LP E+G L  L TL L  N L     
Sbjct: 66  RLDLSKSSITVLPSSVRELGHLVEFYLYGNKLATLPGEVGSLVNLQTLALSENSLTSLPD 125

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
               LR L VLDL +N L+ +P  + ++T+L  L L  N +R +  ++ N     +L   
Sbjct: 126 TLAHLRQLRVLDLRHNKLNEIPEVVYRLTSLTTLFLRFNRIREVGDNIANLTNLTMLSLR 185

Query: 169 RSRLPENEDSEASTTK--------EDLITMATRLS--VTSKELSLEGMNLSAIPSEIWEA 218
            +++ E        T+          L  + T +   V    L ++   L  IP  I   
Sbjct: 186 ENKIRELPAGIGKLTQLITFDASNNQLKHLPTEIGNCVQLSTLDVQHNELIDIPETIGNL 245

Query: 219 GEITKLDLSR--NSIQELPPELSSCASLQTLILS------------------------RN 252
             +T+L L +  N +  +P  LS+C ++    +                         RN
Sbjct: 246 KVLTRLGLRQVYNQLTSVPKSLSNCVNMTDFNVESNLVSQLPEGLLSSFSNLSSLTLSRN 305

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
               +P    +   S+  + +++N + ++P   F     L  L++  N + SLP +    
Sbjct: 306 NFTSYPVGGPSQFCSVYAINMEHNQINKIPFGIFSRARNLTKLNMKDNQLTSLPLD--MG 363

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           +  ++ EL L   QL + P DI  LQ L +L LS N L+ +P    +L  L  LDL +N 
Sbjct: 364 TWTNMVELNLGTNQLSKVPDDIQYLQSLEVLTLSNNLLRRLPPTIGSLAKLRVLDLEENR 423

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           + ALP E+G+L   LQ L    N L S+ R I   G  + L YL
Sbjct: 424 LDALPNEIGMLR-ELQKLVAQSNQLSSLPRAI---GHLSNLTYL 463



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 95/187 (50%), Gaps = 5/187 (2%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   +++ +PS + E G + +  L  N +  LP E+ S  +LQTL LS N +   
Sbjct: 64  STRLDLSKSSITVLPSSVRELGHLVEFYLYGNKLATLPGEVGSLVNLQTLALSENSLTSL 123

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           PD  L  L  L  L L +N L ++P   ++ +  L  L L +N I  + +N   ++L +L
Sbjct: 124 PDT-LAHLRQLRVLDLRHNKLNEIPEVVYR-LTSLTTLFLRFNRIREVGDN--IANLTNL 179

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L LR  ++RE P  I +L QL   D S N L+ +P    N   L+ LD+  N +  +P
Sbjct: 180 TMLSLRENKIRELPAGIGKLTQLITFDASNNQLKHLPTEIGNCVQLSTLDVQHNELIDIP 239

Query: 377 PELGLLE 383
             +G L+
Sbjct: 240 ETIGNLK 246



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 15/235 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E N++  +   + +    LT+L    N L  +P  +G+ + ++ L+L  N++  +P 
Sbjct: 324 INMEHNQINKIPFGIFSRARNLTKLNMKDNQLTSLPLDMGTWTNMVELNLGTNQLSKVPD 383

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    SL    + NN L  LP  +G L+KL  LDL  N+L     E   LR L  L   
Sbjct: 384 DIQYLQSLEVLTLSNNLLRRLPPTIGSLAKLRVLDLEENRLDALPNEIGMLRELQKLVAQ 443

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N LS LP  IG ++ L  L +  N L  +   +        L  L S    +  +  S 
Sbjct: 444 SNQLSSLPRAIGHLSNLTYLGVGENNLNFIPEEI------GTLDSLESLYINDNPNLHSL 497

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE--ITKLDLSRNSIQELP 235
             E  + + + L +    +S+E   LS IP EI   G   + ++ LS +S    P
Sbjct: 498 PFE--LALCSNLQI----MSIENCPLSQIPPEIVNGGPSLVIQVSLSASSPPHFP 546


>gi|341886752|gb|EGT42687.1| CBN-LET-413 protein [Caenorhabditis brenneri]
          Length = 711

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 171/370 (46%), Gaps = 47/370 (12%)

Query: 5   DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 64
           DV  N+L+VL  + I   T L EL  ++N +  +PET+ +   L  L L+ N    +P S
Sbjct: 65  DVSDNELSVLPPD-IGHLTQLIELNLNRNTITDIPETLKNCKLLTNLHLNGNPFTRLPES 123

Query: 65  ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 123
           I  C S+    + +  L+ LPA +G L  L  LD   N L+       +L+ L  LDL  
Sbjct: 124 ICECTSITILSLNDTTLTILPANIGLLVNLRVLDARENHLRTIPNSIAELKNLEELDLGQ 183

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEA 180
           N +  LP +IGK+T+LR+  +  N L++L  S+ +      L       SRLP+N  +  
Sbjct: 184 NEIEELPQKIGKLTSLREFYVDTNFLQSLPDSISDCRNLDQLDVSDNRLSRLPDNLGN-- 241

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                  +T  T L+++S E       +  +PS I     +  L   RNS+ +L PE+  
Sbjct: 242 -------MTSLTDLNISSNE-------IIELPSSIGNLKRLQMLKAERNSLTQLAPEIGQ 287

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
           C SL  + L +N + D PD I   L  L+ L +D N L ++P +   +   L +L L  N
Sbjct: 288 CQSLTEMYLGQNYLSDLPDTI-GDLRQLTTLNVDCNNLSEIP-ETIGNCKSLTVLSLRQN 345

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
           I                        L E P  I R + + +LD++ N L ++P   K L 
Sbjct: 346 I------------------------LTELPMTIGRCENMTVLDVASNKLPNLPFTVKVLY 381

Query: 361 SLTELDLSDN 370
            L  L LS+N
Sbjct: 382 KLQALWLSEN 391



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 160/355 (45%), Gaps = 63/355 (17%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
            S N L+ +P  IG L++LI L+L++N I  IP ++  C  L   ++  N  + LP  + 
Sbjct: 66  VSDNELSVLPPDIGHLTQLIELNLNRNTITDIPETLKNCKLLTNLHLNGNPFTRLPESIC 125

Query: 90  KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           + + +                      ++L L++ +L+ LP  IG +  LR L    N L
Sbjct: 126 ECTSI----------------------TILSLNDTTLTILPANIGLLVNLRVLDARENHL 163

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
           RT+ +S+      A LK L                              +EL L    + 
Sbjct: 164 RTIPNSI------AELKNL------------------------------EELDLGQNEIE 187

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P +I +   + +  +  N +Q LP  +S C +L  L +S N++   PD  L +++SL+
Sbjct: 188 ELPQKIGKLTSLREFYVDTNFLQSLPDSISDCRNLDQLDVSDNRLSRLPDN-LGNMTSLT 246

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE-NPPFSSLPHLQELYLRRMQLRE 328
            L + +N + ++PS    ++  LQ+L    N  SL +  P       L E+YL +  L +
Sbjct: 247 DLNISSNEIIELPS-SIGNLKRLQMLKAERN--SLTQLAPEIGQCQSLTEMYLGQNYLSD 303

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            P  I  L+QL  L++  N+L  IPE   N  SLT L L  N ++ LP  +G  E
Sbjct: 304 LPDTIGDLRQLTTLNVDCNNLSEIPETIGNCKSLTVLSLRQNILTELPMTIGRCE 358



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 120/256 (46%), Gaps = 38/256 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD   N L  + N+ IA    L EL   +N +  +P+ IG L+ L    +  N + S+P 
Sbjct: 156 LDARENHLRTIPNS-IAELKNLEELDLGQNEIEELPQKIGKLTSLREFYVDTNFLQSLPD 214

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
           SIS C +L +  + +N LS LP  LG ++ L  L++ SN++ E       L RL +L   
Sbjct: 215 SISDCRNLDQLDVSDNRLSRLPDNLGNMTSLTDLNISSNEIIELPSSIGNLKRLQMLKAE 274

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            NSL+ L PEIG+  +L ++ L  N                   YL S LP+        
Sbjct: 275 RNSLTQLAPEIGQCQSLTEMYLGQN-------------------YL-SDLPD-------- 306

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
           T  DL  + T        L+++  NLS IP  I     +T L L +N + ELP  +  C 
Sbjct: 307 TIGDLRQLTT--------LNVDCNNLSEIPETIGNCKSLTVLSLRQNILTELPMTIGRCE 358

Query: 243 SLQTLILSRNKIKDWP 258
           ++  L ++ NK+ + P
Sbjct: 359 NMTVLDVASNKLPNLP 374



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 4/154 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LDV  N+L+ L +NL  + T LT+L  S N +  +P +IG+L RL  L   +N +  
Sbjct: 222 LDQLDVSDNRLSRLPDNL-GNMTSLTDLNISSNEIIELPSSIGNLKRLQMLKAERNSLTQ 280

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSV 118
           +   I  C SL E Y+G N LS LP  +G L +L TL++  N L E    +  C+  L+V
Sbjct: 281 LAPEIGQCQSLTEMYLGQNYLSDLPDTIGDLRQLTTLNVDCNNLSEIPETIGNCK-SLTV 339

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L L  N L+ LP  IG+   +  L +  N L  L
Sbjct: 340 LSLRQNILTELPMTIGRCENMTVLDVASNKLPNL 373



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 172/381 (45%), Gaps = 20/381 (5%)

Query: 42  IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 101
           +G   ++  +D   + + +IP+ I     L +  +  N +  L   L  L +L  LD+  
Sbjct: 9   MGCQRQVDSVDRSSSNLQAIPTDIFRFRKLEDLNLTMNNIKELDRRLFTLRRLRVLDVSD 68

Query: 102 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 160
           N+L     +   L +L  L+L+ N+++ +P  +     L  L L GNP   L  S+    
Sbjct: 69  NELSVLPPDIGHLTQLIELNLNRNTITDIPETLKNCKLLTNLHLNGNPFTRLPESICECT 128

Query: 161 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 220
           +  +L               + T   ++     L V  + L     +L  IP+ I E   
Sbjct: 129 SITILSL-------------NDTTLTILPANIGLLVNLRVLDARENHLRTIPNSIAELKN 175

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
           + +LDL +N I+ELP ++    SL+   +  N ++  PD+I +   +L  L + +N L +
Sbjct: 176 LEELDLGQNEIEELPQKIGKLTSLREFYVDTNFLQSLPDSI-SDCRNLDQLDVSDNRLSR 234

Query: 281 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
           +P D   ++  L  L++S N I  LP +    +L  LQ L   R  L +   +I + Q L
Sbjct: 235 LP-DNLGNMTSLTDLNISSNEIIELPSS--IGNLKRLQMLKAERNSLTQLAPEIGQCQSL 291

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
             + L QN L  +P+   +L  LT L++  NN+S +P  +G  + SL  L L  N L  +
Sbjct: 292 TEMYLGQNYLSDLPDTIGDLRQLTTLNVDCNNLSEIPETIGNCK-SLTVLSLRQNILTEL 350

Query: 400 RRTILDRGTKAVLKYLKDKIP 420
             TI       VL    +K+P
Sbjct: 351 PMTIGRCENMTVLDVASNKLP 371



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 137/292 (46%), Gaps = 20/292 (6%)

Query: 107 YCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
           +C+   CQ ++  +D S+++L  +P +I +   L  L LT N ++ L   L         
Sbjct: 5   FCLPMGCQRQVDSVDRSSSNLQAIPTDIFRFRKLEDLNLTMNNIKELDRRLF-------- 56

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
              R R+ +  D+E S    D+  +   +     EL+L    ++ IP  +     +T L 
Sbjct: 57  TLRRLRVLDVSDNELSVLPPDIGHLTQLI-----ELNLNRNTITDIPETLKNCKLLTNLH 111

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           L+ N    LP  +  C S+  L L+   +   P A +  L +L  L    N LR +P + 
Sbjct: 112 LNGNPFTRLPESICECTSITILSLNDTTLTILP-ANIGLLVNLRVLDARENHLRTIP-NS 169

Query: 286 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
             ++  L+ LDL  N I  LP+      L  L+E Y+    L+  P  I   + L  LD+
Sbjct: 170 IAELKNLEELDLGQNEIEELPQK--IGKLTSLREFYVDTNFLQSLPDSISDCRNLDQLDV 227

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           S N L  +P+   N+TSLT+L++S N I  LP  +G L+  LQ L+ + N L
Sbjct: 228 SDNRLSRLPDNLGNMTSLTDLNISSNEIIELPSSIGNLK-RLQMLKAERNSL 278


>gi|322784971|gb|EFZ11742.1| hypothetical protein SINV_11435 [Solenopsis invicta]
          Length = 580

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 202/421 (47%), Gaps = 21/421 (4%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  NKLT + + ++   T LT L    N L  + + I +L+RL  L   +N+I  +P+
Sbjct: 173 LDLRHNKLTEIPD-VVYRLTSLTTLYLRFNRLKYVSDNICNLTRLTMLSFRENKIKELPA 231

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I    +L  F + +N L  LP E+GK  +L +LD+  N+L +       L  L+ L L 
Sbjct: 232 GIGELVNLVTFDVSHNHLEHLPVEIGKCVQLSSLDVQHNELLDLPDTIGNLVALTRLGLR 291

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ +P  +     + +  + GN +  L   L+      L     SR   N  S  + 
Sbjct: 292 YNRLTNIPKSLANCRMMDEFSVEGNQVSHLPDGLL-ASLSCLTTITLSR--NNFTSYPAG 348

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSC 241
                        V +  +++E   +  IP  I+  +  +TKL++  N +  LP ++ S 
Sbjct: 349 GPAQF--------VNAYSINVEHNQIDKIPYGIFSRSRNLTKLNMKENLLNALPLDIGSW 400

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 300
            ++  L L  N++   PD I   L SL  L L NN L+++P+    ++  L++LDL  N 
Sbjct: 401 VTMVELNLGTNQLMKLPDDI-QCLQSLEVLILSNNLLKRIPTT-MVNLHKLRVLDLEENR 458

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
           I  LP +     +  LQ+L L+  Q+   P  I  L+ L  L + +N+L  +PE    L 
Sbjct: 459 IDMLPND--IGLMTELQKLILQSNQITVLPRSIGHLKNLTYLSVGENNLSCLPEEVGTLD 516

Query: 361 SLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           SL  L L+DN N+  LP EL L + +L  + ++  PL  I   I+  G   V+++LK + 
Sbjct: 517 SLESLYLNDNPNLHNLPFELALCK-NLGIMSIENCPLSHIPAEIVAGGPSLVVQFLKMQG 575

Query: 420 P 420
           P
Sbjct: 576 P 576



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 174/388 (44%), Gaps = 35/388 (9%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
           RLDL +  I  +PSS+     L EFY+  N L  LP E+G LS L TL L  N L     
Sbjct: 103 RLDLSKASITILPSSVKELKHLREFYLYGNKLVTLPPEIGYLSNLETLALSENALTSLPN 162

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
               L+ L VLDL +N L+ +P  + ++T+L  L L  N L+ +  ++ N     +L + 
Sbjct: 163 TLDNLKLLRVLDLRHNKLTEIPDVVYRLTSLTTLYLRFNRLKYVSDNICNLTRLTMLSFR 222

Query: 169 RSRLPENEDS----------EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 218
            +++ E              + S    + + +     V    L ++   L  +P  I   
Sbjct: 223 ENKIKELPAGIGELVNLVTFDVSHNHLEHLPVEIGKCVQLSSLDVQHNELLDLPDTIGNL 282

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
             +T+L L  N +  +P  L++C  +    +  N++   PD +L SLS L+ + L  N  
Sbjct: 283 VALTRLGLRYNRLTNIPKSLANCRMMDEFSVEGNQVSHLPDGLLASLSCLTTITLSRNNF 342

Query: 279 RQVPSDG---FK-----DIPMLQILDLSYNIASLPENPP--------FSSLP-------H 315
              P+ G   F      ++   QI  + Y I S   N           ++LP        
Sbjct: 343 TSYPAGGPAQFVNAYSINVEHNQIDKIPYGIFSRSRNLTKLNMKENLLNALPLDIGSWVT 402

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           + EL L   QL + P DI  LQ L +L LS N L+ IP    NL  L  LDL +N I  L
Sbjct: 403 MVELNLGTNQLMKLPDDIQCLQSLEVLILSNNLLKRIPTTMVNLHKLRVLDLEENRIDML 462

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P ++GL+   LQ L L  N +  + R+I
Sbjct: 463 PNDIGLMT-ELQKLILQSNQITVLPRSI 489



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 295 LDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           LDLS  +I  LP +     L HL+E YL   +L   P +I  L  L  L LS+N+L S+P
Sbjct: 104 LDLSKASITILPSS--VKELKHLREFYLYGNKLVTLPPEIGYLSNLETLALSENALTSLP 161

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
               NL  L  LDL  N ++ +P  +  L  SL  L L  N L+ +   I +     +L 
Sbjct: 162 NTLDNLKLLRVLDLRHNKLTEIPDVVYRLT-SLTTLYLRFNRLKYVSDNICNLTRLTMLS 220

Query: 414 YLKDKIPE 421
           + ++KI E
Sbjct: 221 FRENKIKE 228


>gi|421090943|ref|ZP_15551732.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000270|gb|EKO50915.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 376

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 177/369 (47%), Gaps = 51/369 (13%)

Query: 39  PETIGSLSRLIR-------LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           P T   L++ I+       L+L  NR  ++P  I    +L E  +  N L+ LP E+G+L
Sbjct: 32  PGTYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQL 91

Query: 92  SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
             L  L+LH NQ      E  +L  L  L L +N L+ LP EIG++  LR L LT N  +
Sbjct: 92  KNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFK 151

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
           T+   +        LK L++                              L+L    L+A
Sbjct: 152 TIPKEI------GQLKNLQT------------------------------LNLGNNQLTA 175

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +P+EI +   +  LDL  N +  LP E+     LQ L LS N++   P+ I   L +L  
Sbjct: 176 LPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEI-GQLQNLQE 234

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 329
           L L +N L  +P++    +  LQ L L  N + +L ++     L +L+ L L   QL   
Sbjct: 235 LYLGSNQLTILPNE-IGQLKNLQTLYLRSNRLTTLSKD--IEQLQNLKSLDLWNNQLTTF 291

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
           P +I +L+ L++LDL  N L ++PE  + L +L  LDL  N ++ +P E+G L+ +LQ L
Sbjct: 292 PKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTTIPKEIGQLQ-NLQ-L 349

Query: 390 RLDGNPLRS 398
            L+ N L S
Sbjct: 350 YLNNNQLSS 358



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 163/357 (45%), Gaps = 64/357 (17%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L EL  +KN L  +P+ IG L  L +L+LH N+   +P  +    +L E  +G+
Sbjct: 65  IGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGS 124

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP E+G+L  L  L L  NQ K    E  QL+ L  L+L NN L+ LP EIG++ 
Sbjct: 125 NRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQ 184

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L+ L L  N L TL + +              +L + +D   ST +             
Sbjct: 185 NLKSLDLGSNRLTTLPNEI-------------GQLQKLQDLYLSTNR------------- 218

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
                     L+ +P+EI +   + +L L  N +  LP E+    +LQTL L  N++   
Sbjct: 219 ----------LTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTL 268

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
              I   L +L  L L NN L   P +  + +  LQ+LDL  N                 
Sbjct: 269 SKDI-EQLQNLKSLDLWNNQLTTFPKE-IEQLKNLQVLDLGSN----------------- 309

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
                  QL   P +I +L+ L++LDL  N L +IP+    L +L +L L++N +S+
Sbjct: 310 -------QLTTLPEEIEQLKNLQVLDLGSNQLTTIPKEIGQLQNL-QLYLNNNQLSS 358



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 144/288 (50%), Gaps = 21/288 (7%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RL 172
           L + VL+LS N    LP EIGK+  L++L L  N L  L   +        LK LR   L
Sbjct: 46  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEI------GQLKNLRKLNL 99

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
            +N+ +      E L  +        KELSL    L+ +P+EI +   +  L L+ N  +
Sbjct: 100 HDNQFTILPKEVEKLENL--------KELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFK 151

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            +P E+    +LQTL L  N++   P+ I   L +L  L L +N L  +P++    +  L
Sbjct: 152 TIPKEIGQLKNLQTLNLGNNQLTALPNEI-GQLQNLKSLDLGSNRLTTLPNE-IGQLQKL 209

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           Q L LS N + +LP       L +LQELYL   QL   P +I +L+ L+ L L  N L +
Sbjct: 210 QDLYLSTNRLTTLPN--EIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTT 267

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           + +  + L +L  LDL +N ++  P E+  L+ +LQ L L  N L ++
Sbjct: 268 LSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLK-NLQVLDLGSNQLTTL 314



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 82/153 (53%), Gaps = 2/153 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++  N+LT L N  I     L  L    N L  +P  IG L +L  L L  NR+ +
Sbjct: 163 LQTLNLGNNQLTALPNE-IGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTT 221

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E Y+G+N L+ LP E+G+L  L TL L SN+L     +  QL+ L  L
Sbjct: 222 LPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSL 281

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           DL NN L+  P EI ++  L+ L L  N L TL
Sbjct: 282 DLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTL 314



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 7/221 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E   T  DL T A +  +  + L+L       +P EI +   + +L+L++N +  LP 
Sbjct: 28  QAEEPGTYRDL-TKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPK 86

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    +L+ L L  N+    P  +   L +L  L L +N L  +P++    +  L++L 
Sbjct: 87  EIGQLKNLRKLNLHDNQFTILPKEV-EKLENLKELSLGSNRLTTLPNE-IGQLKNLRVLK 144

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L++N   ++P+      L +LQ L L   QL   P +I +LQ L+ LDL  N L ++P  
Sbjct: 145 LTHNQFKTIPK--EIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNE 202

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
              L  L +L LS N ++ LP E+G L+ +LQ L L  N L
Sbjct: 203 IGQLQKLQDLYLSTNRLTTLPNEIGQLQ-NLQELYLGSNQL 242


>gi|429961316|gb|ELA40861.1| hypothetical protein VICG_02102 [Vittaforma corneae ATCC 50505]
          Length = 418

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 181/383 (47%), Gaps = 48/383 (12%)

Query: 42  IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 101
           I  L +L +LDL  N + ++P  I     L   Y+  N L  LP E+ +L KL  L L +
Sbjct: 63  IKRLVKLEKLDLSVNNLETLPPEIGELKDLKMLYLNGNELGTLPPEIRRLEKLQCLYLRN 122

Query: 102 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 160
           N+LK   +E  +L+ L  LDL+ N L  LP EIG++  L+ L L GN L TL   +    
Sbjct: 123 NKLKLLPIEIGELKNLQALDLNGNKLETLPAEIGELENLQYLDLNGNELETLPLEI---- 178

Query: 161 TPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 219
               LK LR   L  N+    ST  + L  +   L +++ E  L       +PSEI E  
Sbjct: 179 --GELKNLRYLNLGNNKLGILSTVIKKLKNLEI-LCLSNNEFEL-------LPSEIVELE 228

Query: 220 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
           ++  L L  N ++ LP E+    +LQ L L+ N+++  P A++  L +L  L+   N L 
Sbjct: 229 KLQCLYLHGNKLKLLPIEIEGLENLQELDLNGNELETLP-AVIWKLKNLKTLRFGYNKLE 287

Query: 280 QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
            +P +                            L  LQ LYL   +L+  P +I  L+ L
Sbjct: 288 TLPVE-------------------------IVELEKLQFLYLHGNKLKLLPIEIEGLENL 322

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL--- 396
           + LDL+ N L+++P     L +L  L L  N +  LP E+G L  SLQ L L GN +   
Sbjct: 323 QELDLNGNELETLPLEIGELKNLKTLRLCYNKLETLPVEIGELSGSLQFLDLRGNNILEE 382

Query: 397 RSIRRTILDRGTKAVLKYLKDKI 419
              +RT+   G K + +  +D++
Sbjct: 383 GDGKRTL---GKKELSEIFEDRV 402



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 175/374 (46%), Gaps = 44/374 (11%)

Query: 2   SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 61
           +++D+    +T + ++ I     L +L  S N L  +P  IG L  L  L L+ N + ++
Sbjct: 47  TEIDIYSQGITSIDSD-IKRLVKLEKLDLSVNNLETLPPEIGELKDLKMLYLNGNELGTL 105

Query: 62  PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 120
           P  I     L   Y+ NN L  LP E+G+L  L  LDL+ N+L+    E  +L  L  LD
Sbjct: 106 PPEIRRLEKLQCLYLRNNKLKLLPIEIGELKNLQALDLNGNKLETLPAEIGELENLQYLD 165

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           L+ N L  LP EIG++  LR L L  N L         G    ++K L++          
Sbjct: 166 LNGNELETLPLEIGELKNLRYLNLGNNKL---------GILSTVIKKLKN---------- 206

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                        L +++ E  L       +PSEI E  ++  L L  N ++ LP E+  
Sbjct: 207 ----------LEILCLSNNEFEL-------LPSEIVELEKLQCLYLHGNKLKLLPIEIEG 249

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             +LQ L L+ N+++  P A++  L +L  L+   N L  +P +   ++  LQ L L  N
Sbjct: 250 LENLQELDLNGNELETLP-AVIWKLKNLKTLRFGYNKLETLPVE-IVELEKLQFLYLHGN 307

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            +  LP       L +LQEL L   +L   P +I  L+ L+ L L  N L+++P     L
Sbjct: 308 KLKLLP--IEIEGLENLQELDLNGNELETLPLEIGELKNLKTLRLCYNKLETLPVEIGEL 365

Query: 360 T-SLTELDLSDNNI 372
           + SL  LDL  NNI
Sbjct: 366 SGSLQFLDLRGNNI 379



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 107/203 (52%), Gaps = 6/203 (2%)

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
           V + E+ +    +++I S+I    ++ KLDLS N+++ LPPE+     L+ L L+ N++ 
Sbjct: 44  VDTTEIDIYSQGITSIDSDIKRLVKLEKLDLSVNNLETLPPEIGELKDLKMLYLNGNELG 103

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             P  I   L  L CL L NN L+ +P +   ++  LQ LDL+ N + +LP       L 
Sbjct: 104 TLPPEI-RRLEKLQCLYLRNNKLKLLPIE-IGELKNLQALDLNGNKLETLP--AEIGELE 159

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           +LQ L L   +L   P +I  L+ LR L+L  N L  +    K L +L  L LS+N    
Sbjct: 160 NLQYLDLNGNELETLPLEIGELKNLRYLNLGNNKLGILSTVIKKLKNLEILCLSNNEFEL 219

Query: 375 LPPELGLLEPSLQALRLDGNPLR 397
           LP E+  LE  LQ L L GN L+
Sbjct: 220 LPSEIVELE-KLQCLYLHGNKLK 241



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 3/128 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+ GN+L  L   +I     L  L    N L  +P  I  L +L  L LH N++  
Sbjct: 253 LQELDLNGNELETLPA-VIWKLKNLKTLRFGYNKLETLPVEIVELEKLQFLYLHGNKLKL 311

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSV 118
           +P  I G  +L E  +  N L  LP E+G+L  L TL L  N+L+   VE  +L   L  
Sbjct: 312 LPIEIEGLENLQELDLNGNELETLPLEIGELKNLKTLRLCYNKLETLPVEIGELSGSLQF 371

Query: 119 LDLSNNSL 126
           LDL  N++
Sbjct: 372 LDLRGNNI 379


>gi|424840764|ref|ZP_18265389.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395318962|gb|EJF51883.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 485

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 173/366 (47%), Gaps = 41/366 (11%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +PE IG L  L  L L+   I  +P+SI    +L    +GN  L  LP ELG+L  L
Sbjct: 94  LEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLQILDLGNCQLQELPEELGQLQNL 153

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L+L +NQL+E      QL+ L + DLS+N L  LP E  ++T L +L L  N L  L 
Sbjct: 154 EALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALANNLLSFLP 213

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
           S+   G   AL           +  + S  + D +  +       + L L+  +L  IP+
Sbjct: 214 SNF--GQLQAL-----------KTLQLSENQLDQLPASLGQLKQLELLELQDNDLGQIPA 260

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           +I +   + +LDLS N IQ+LPPE+    +L++L ++ N++   P      L +L  L+L
Sbjct: 261 QIGQLQSLVELDLSDNFIQQLPPEIGQLQALKSLFITENELSQLPPEF-AQLKNLQELQL 319

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
             N L  +P +                         F  L  L+EL L   +L   P  I
Sbjct: 320 QENKLIALPIN-------------------------FGKLSQLEELQLSENKLEALPKSI 354

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
            RL++L  L+L  N +   P+   N+ +L  LDL  N I  LP E+  L+ +L+ L L  
Sbjct: 355 KRLKKLSSLNLGNNEIYLFPKNACNIKNLLALDLEGNYIEELPEEISQLQ-NLEFLILYD 413

Query: 394 NPLRSI 399
           N LR++
Sbjct: 414 NELRNL 419



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 154/340 (45%), Gaps = 42/340 (12%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N L  +P +IG L  L   DL  NR+  +P+  S    L E  + NN LS LP+  G+
Sbjct: 159 SANQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALANNLLSFLPSNFGQ 218

Query: 91  LSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L TL L  NQL +         +L +L+L +N L  +P +IG++ +L +L L+ N +
Sbjct: 219 LQALKTLQLSENQLDQLPASLGQLKQLELLELQDNDLGQIPAQIGQLQSLVELDLSDNFI 278

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
           + L       P    L+ L+S                       L +T  EL       S
Sbjct: 279 QQL------PPEIGQLQALKS-----------------------LFITENEL-------S 302

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P E  +   + +L L  N +  LP      + L+ L LS NK++  P +I   L  LS
Sbjct: 303 QLPPEFAQLKNLQELQLQENKLIALPINFGKLSQLEELQLSENKLEALPKSI-KRLKKLS 361

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
            L L NN +   P +   +I  L  LDL  N I  LPE    S L +L+ L L   +LR 
Sbjct: 362 SLNLGNNEIYLFPKNAC-NIKNLLALDLEGNYIEELPEE--ISQLQNLEFLILYDNELRN 418

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 368
            P  +  L  LR L++S N  ++ PE    +  L +L L+
Sbjct: 419 LPPYLQDLTALRRLEISDNEFETFPEVLYQMRQLNDLILN 458



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 143/299 (47%), Gaps = 21/299 (7%)

Query: 5   DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 64
           D+  N+L  L N   +  T L EL  + NLL+ +P   G L  L  L L +N++  +P+S
Sbjct: 180 DLSSNRLQELPNE-FSQLTQLEELALANNLLSFLPSNFGQLQALKTLQLSENQLDQLPAS 238

Query: 65  ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 123
           +     L    + +N L  +PA++G+L  L  LDL  N +++   E  QL+ L  L ++ 
Sbjct: 239 LGQLKQLELLELQDNDLGQIPAQIGQLQSLVELDLSDNFIQQLPPEIGQLQALKSLFITE 298

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N LS LPPE  ++  L++L L  N L  L  +               +L + E+ + S  
Sbjct: 299 NELSQLPPEFAQLKNLQELQLQENKLIALPINF-------------GKLSQLEELQLSEN 345

Query: 184 K-EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
           K E L     RL   S  L+L    +   P        +  LDL  N I+ELP E+S   
Sbjct: 346 KLEALPKSIKRLKKLSS-LNLGNNEIYLFPKNACNIKNLLALDLEGNYIEELPEEISQLQ 404

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
           +L+ LIL  N++++ P   L  L++L  L++ +N     P   ++   M Q+ DL  N+
Sbjct: 405 NLEFLILYDNELRNLP-PYLQDLTALRRLEISDNEFETFPEVLYQ---MRQLNDLILNV 459


>gi|291240668|ref|XP_002740240.1| PREDICTED: ERBB2 interacting protein-like [Saccoglossus
           kowalevskii]
          Length = 1112

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 187/386 (48%), Gaps = 30/386 (7%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L   + SKN L  +P++IG L++L     H+N++ S+P SI    +L + ++  N+L+++
Sbjct: 146 LETFLISKNSLVSIPDSIGDLNKLQDFQAHRNKLSSLPESIGKLQNLTKLWVSRNSLTSI 205

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVE------ACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           P  +  L+KL  L LH+N L  Y  +       C L +L  L L  N++  LP  IG++ 
Sbjct: 206 PDSICDLNKLQDLRLHTNNL-SYLPDRIVPESICDLHKLHDLQLHGNNIQFLPKRIGQLK 264

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-EDLITMATRLSV 196
            LRKL ++ N L  L  S+ +             L + ED +    K   L +   +L  
Sbjct: 265 WLRKLRMSSNSLTRLPHSICD-------------LNKLEDLQLHMNKLSSLPSQIGKLKH 311

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K LS+ G ++  +P  I +  ++T+L    N I  LP  +    +L T+ +SRN +  
Sbjct: 312 V-KNLSISGNSIKILPDSIGDLQQLTRLYAHGNQISHLPESIWELRNLTTMWISRNSLVT 370

Query: 257 WP--DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSL 313
               +  + + S +  L+L  N L  +P D    +  L+ L +S N+  SLP +     L
Sbjct: 371 VSINNGTIRNCSQIQDLQLHKNSLSYLPED-IGSLHGLKKLSVSGNLFKSLPSS--IGHL 427

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
             L  LY    Q+   P  I  LQ L+ + + +NSL SIP    +L  L +L +  NN+S
Sbjct: 428 TWLTRLYAHDNQITLLPESIGGLQDLKTMWVQENSLVSIPHNIGHLHQLEDLRIHKNNLS 487

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSI 399
           +LP  +G L  +L  L    N L SI
Sbjct: 488 SLPDSVGDLT-NLTTLWASNNKLTSI 512



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 191/402 (47%), Gaps = 35/402 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N LT L ++ I     L +L    N L+ +P  IG L  +  L +  N I  
Sbjct: 266 LRKLRMSSNSLTRLPHS-ICDLNKLEDLQLHMNKLSSLPSQIGKLKHVKNLSISGNSIKI 324

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----L 116
           +P SI     L   Y   N +S LP  + +L  L T+ +  N L    +    +R    +
Sbjct: 325 LPDSIGDLQQLTRLYAHGNQISHLPESIWELRNLTTMWISRNSLVTVSINNGTIRNCSQI 384

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 176
             L L  NSLS LP +IG +  L+KL ++GN  ++L SS+        L +L +RL  ++
Sbjct: 385 QDLQLHKNSLSYLPEDIGSLHGLKKLSVSGNLFKSLPSSI------GHLTWL-TRLYAHD 437

Query: 177 DS-----EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 231
           +      E+    +DL TM            ++  +L +IP  I    ++  L + +N++
Sbjct: 438 NQITLLPESIGGLQDLKTMW-----------VQENSLVSIPHNIGHLHQLEDLRIHKNNL 486

Query: 232 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 291
             LP  +    +L TL  S NK+   PD++   L  L  L+LD N L  +P++  K I  
Sbjct: 487 SSLPDSVGDLTNLTTLWASNNKLTSIPDSV-CELHELQHLQLDTNSLTFLPTNIGK-ISW 544

Query: 292 LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
           L+ L ++ N + +LP+     +L  L++L++   QL + P  I +L+ L  L +S+N+L 
Sbjct: 545 LKTLCVNNNSLTTLPDR--IGNLHTLEKLHVANNQLSQLPESIRKLKNLTTLVVSKNALV 602

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
           S+P     L  L +    +N + +LP  +  L   L  ++ D
Sbjct: 603 SMP-NMSYLHKLEQFRFENNELQSLPRGIDTLR-HLHTIKFD 642



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 184/437 (42%), Gaps = 44/437 (10%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           G  L+     L+ ++T +  +   KN +  +P +I +L +L  L ++ NR+ S+P SI  
Sbjct: 37  GCGLSTFPGILLTTYTCVHNVDLKKNRIAKLPPSISTLKQLRMLHMNSNRLTSLPGSICK 96

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 126
             +L+   +  N+L  LP  +  L +L  L L++NQ+        +LR L    +S NSL
Sbjct: 97  LRNLSTLCLERNSLKTLPNSICNLQQLERLYLNNNQISHLPECIGKLRNLETFLISKNSL 156

Query: 127 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-E 185
             +P  IG +  L+      N L +L  S+        L   R+ L    DS     K +
Sbjct: 157 VSIPDSIGDLNKLQDFQAHRNKLSSLPESIGKLQNLTKLWVSRNSLTSIPDSICDLNKLQ 216

Query: 186 DLITMATRLSVTS--------------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 231
           DL      LS                  +L L G N+  +P  I +   + KL +S NS+
Sbjct: 217 DLRLHTNNLSYLPDRIVPESICDLHKLHDLQLHGNNIQFLPKRIGQLKWLRKLRMSSNSL 276

Query: 232 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 291
             LP  +     L+ L L  NK+   P  I   L  +  L +  N ++ +P D   D+  
Sbjct: 277 TRLPHSICDLNKLEDLQLHMNKLSSLPSQI-GKLKHVKNLSISGNSIKILP-DSIGDLQQ 334

Query: 292 LQILDLSYN-IASLPE------------------------NPPFSSLPHLQELYLRRMQL 326
           L  L    N I+ LPE                        N    +   +Q+L L +  L
Sbjct: 335 LTRLYAHGNQISHLPESIWELRNLTTMWISRNSLVTVSINNGTIRNCSQIQDLQLHKNSL 394

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
              P DI  L  L+ L +S N  +S+P    +LT LT L   DN I+ LP  +G L+  L
Sbjct: 395 SYLPEDIGSLHGLKKLSVSGNLFKSLPSSIGHLTWLTRLYAHDNQITLLPESIGGLQ-DL 453

Query: 387 QALRLDGNPLRSIRRTI 403
           + + +  N L SI   I
Sbjct: 454 KTMWVQENSLVSIPHNI 470



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 196/470 (41%), Gaps = 75/470 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +       NKL+ L  + I     LT+L  S+N L  +P++I  L++L  L LH N +  
Sbjct: 169 LQDFQAHRNKLSSLPES-IGKLQNLTKLWVSRNSLTSIPDSICDLNKLQDLRLHTNNLSY 227

Query: 61  -----IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL- 114
                +P SI     L +  +  N +  LP  +G+L  L  L + SN L       C L 
Sbjct: 228 LPDRIVPESICDLHKLHDLQLHGNNIQFLPKRIGQLKWLRKLRMSSNSLTRLPHSICDLN 287

Query: 115 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR----- 169
           +L  L L  N LS LP +IGK+  ++ L ++GN ++ L  S+  G    L +        
Sbjct: 288 KLEDLQLHMNKLSSLPSQIGKLKHVKNLSISGNSIKILPDSI--GDLQQLTRLYAHGNQI 345

Query: 170 SRLPE------------------------NEDSEASTTKEDLITMATRLSVTS------- 198
           S LPE                        N      +  +DL      LS          
Sbjct: 346 SHLPESIWELRNLTTMWISRNSLVTVSINNGTIRNCSQIQDLQLHKNSLSYLPEDIGSLH 405

Query: 199 --KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K+LS+ G    ++PS I     +T+L    N I  LP  +     L+T+ +  N +  
Sbjct: 406 GLKKLSVSGNLFKSLPSSIGHLTWLTRLYAHDNQITLLPESIGGLQDLKTMWVQENSLVS 465

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
            P  I   L  L  L++  N L  +P D   D+  L  L  S N + S+P++     L  
Sbjct: 466 IPHNI-GHLHQLEDLRIHKNNLSSLP-DSVGDLTNLTTLWASNNKLTSIPDS--VCELHE 521

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           LQ L L    L   PT+I ++  L+ L ++ NSL ++P+   NL +L +L +++N +S L
Sbjct: 522 LQHLQLDTNSLTFLPTNIGKISWLKTLCVNNNSLTTLPDRIGNLHTLEKLHVANNQLSQL 581

Query: 376 P----------------------PELGLLEPSLQALRLDGNPLRSIRRTI 403
           P                      P +  L   L+  R + N L+S+ R I
Sbjct: 582 PESIRKLKNLTTLVVSKNALVSMPNMSYLH-KLEQFRFENNELQSLPRGI 630



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 111/250 (44%), Gaps = 33/250 (13%)

Query: 33   NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
            N L  +PE I    +L  L+++ N++  +P S+    +L +    NN L  LP   G+LS
Sbjct: 856  NYLTTLPEDINYSQKLYYLNINNNKLKCLPESLCELTNLKQLLAKNNELDTLPDNFGELS 915

Query: 93   KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
            KL           EY           L++SNN +  LP  IGK+  L +L    N +  L
Sbjct: 916  KL-----------EY-----------LNISNNKVKSLPESIGKLENLTQLCANNNSISEL 953

Query: 153  RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
                   P    LK L +    N +     +K       + L +T K L + G +L+++P
Sbjct: 954  -------PDIRKLKKLTALYLGNNNKTRPNSK--FSECISNLPITLKTLWMFGNSLTSLP 1004

Query: 213  SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
              I     + +L +  N ++ LP E+    SL  L +  N +K  PD  ++SL  L  L 
Sbjct: 1005 ESISTLRNLEELMIQENKLESLPDEIGKLGSLTKLWVHNNLLKSLPD--ISSLKQLQDLS 1062

Query: 273  LDNNPLRQVP 282
            L +N L ++P
Sbjct: 1063 LTDNKLEKLP 1072



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 136/345 (39%), Gaps = 84/345 (24%)

Query: 27   ELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 85
            E IA K+ L   PE +  +  R+ ++DL  N + ++P  I+    L    + NN L  LP
Sbjct: 826  EYIAVKSDLKEFPEKLLENFQRVRKVDLQSNYLTTLPEDINYSQKLYYLNINNNKLKCLP 885

Query: 86   AELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 144
              L +L+ L  L   +N+L        +L +L  L++SNN +  LP  IGK+  L +L  
Sbjct: 886  ESLCELTNLKQLLAKNNELDTLPDNFGELSKLEYLNISNNKVKSLPESIGKLENLTQLCA 945

Query: 145  TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 204
              N +  L       P    LK L +    N +     +K       + L +T K L   
Sbjct: 946  NNNSISEL-------PDIRKLKKLTALYLGNNNKTRPNSK--FSECISNLPITLKTL--- 993

Query: 205  GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 264
                       W  G         NS+  LP  +S+  +L+ L++  NK++  PD I   
Sbjct: 994  -----------WMFG---------NSLTSLPESISTLRNLEELMIQENKLESLPDEI-GK 1032

Query: 265  LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRM 324
            L SL+ L + NN L+ +P                            SSL  LQ+      
Sbjct: 1033 LGSLTKLWVHNNLLKSLPD--------------------------ISSLKQLQD------ 1060

Query: 325  QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
                             L L+ N L+ +PEG  NL SL  +  +D
Sbjct: 1061 -----------------LSLTDNKLEKLPEGIGNLKSLRSIRFND 1088



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 127/284 (44%), Gaps = 49/284 (17%)

Query: 115  RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
            R+  +DL +N L+ LP +I     L  L +  N L+ L  SL        L  L+  L +
Sbjct: 847  RVRKVDLQSNYLTTLPEDINYSQKLYYLNINNNKLKCLPESLCE------LTNLKQLLAK 900

Query: 175  NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
            N +                              L  +P    E  ++  L++S N ++ L
Sbjct: 901  NNE------------------------------LDTLPDNFGELSKLEYLNISNNKVKSL 930

Query: 235  PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD------ 288
            P  +    +L  L  + N I + PD  +  L  L+ L L NN  +  P+  F +      
Sbjct: 931  PESIGKLENLTQLCANNNSISELPD--IRKLKKLTALYLGNNN-KTRPNSKFSECISNLP 987

Query: 289  IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
            I +  +     ++ SLPE+   S+L +L+EL ++  +L   P +I +L  L  L +  N 
Sbjct: 988  ITLKTLWMFGNSLTSLPES--ISTLRNLEELMIQENKLESLPDEIGKLGSLTKLWVHNNL 1045

Query: 349  LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
            L+S+P+   +L  L +L L+DN +  LP  +G L+ SL+++R +
Sbjct: 1046 LKSLPD-ISSLKQLQDLSLTDNKLEKLPEGIGNLK-SLRSIRFN 1087



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 113/243 (46%), Gaps = 36/243 (14%)

Query: 187  LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQ 245
            +  M +  +   KE      +L   P ++ E  + + K+DL  N +  LP +++    L 
Sbjct: 813  ITKMDSHWNENEKEYIAVKSDLKEFPEKLLENFQRVRKVDLQSNYLTTLPEDINYSQKLY 872

Query: 246  TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASL 304
             L ++ NK+K  P++ L  L++L  L   NN L  +P D F ++  L+ L++S N + SL
Sbjct: 873  YLNINNNKLKCLPES-LCELTNLKQLLAKNNELDTLP-DNFGELSKLEYLNISNNKVKSL 930

Query: 305  PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN----------------- 347
            PE+     L +L +L      + E P DI +L++L  L L  N                 
Sbjct: 931  PES--IGKLENLTQLCANNNSISELP-DIRKLKKLTALYLGNNNKTRPNSKFSECISNLP 987

Query: 348  -----------SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
                       SL S+PE    L +L EL + +N + +LP E+G L  SL  L +  N L
Sbjct: 988  ITLKTLWMFGNSLTSLPESISTLRNLEELMIQENKLESLPDEIGKL-GSLTKLWVHNNLL 1046

Query: 397  RSI 399
            +S+
Sbjct: 1047 KSL 1049



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 118/253 (46%), Gaps = 16/253 (6%)

Query: 152  LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
            ++S L   P   L  + R R  + + +  +T  ED I  + +L      L++    L  +
Sbjct: 830  VKSDLKEFPEKLLENFQRVRKVDLQSNYLTTLPED-INYSQKLYY----LNINNNKLKCL 884

Query: 212  PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
            P  + E   + +L    N +  LP      + L+ L +S NK+K  P++I   L +L+ L
Sbjct: 885  PESLCELTNLKQLLAKNNELDTLPDNFGELSKLEYLNISNNKVKSLPESI-GKLENLTQL 943

Query: 272  KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFS----SLP-HLQELYLRRMQL 326
              +NN + ++P    + +  L  L L  N  + P N  FS    +LP  L+ L++    L
Sbjct: 944  CANNNSISELPD--IRKLKKLTALYLGNNNKTRP-NSKFSECISNLPITLKTLWMFGNSL 1000

Query: 327  REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
               P  I  L+ L  L + +N L+S+P+    L SLT+L + +N + +LP    L +  L
Sbjct: 1001 TSLPESISTLRNLEELMIQENKLESLPDEIGKLGSLTKLWVHNNLLKSLPDISSLKQ--L 1058

Query: 387  QALRLDGNPLRSI 399
            Q L L  N L  +
Sbjct: 1059 QDLSLTDNKLEKL 1071


>gi|418712107|ref|ZP_13272852.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421116140|ref|ZP_15576529.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410012306|gb|EKO70408.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410791374|gb|EKR85050.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 358

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 161/376 (42%), Gaps = 85/376 (22%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           LI S+  L  +PE IG L  L  LDL  N+++ +P  I    +L E ++  N     P E
Sbjct: 32  LILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKE 91

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 147
           + +L       LH                  L LSNN L+ LP EIG++  L++L L  N
Sbjct: 92  IEQLK-----SLHK-----------------LYLSNNQLTILPVEIGQLQNLQELNLWNN 129

Query: 148 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 207
            L+T+   +                            E L  +        ++L L+   
Sbjct: 130 QLKTISKEI----------------------------EQLKNL--------QKLYLDNNQ 153

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+A P EI +   +  L LS N +   P E+    +LQ L LS N++  +P  I   L  
Sbjct: 154 LTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI-GKLQK 212

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L  L L +N L  +P++                            L  LQEL L   QL 
Sbjct: 213 LQWLGLGDNQLTTIPNE-------------------------IGKLQKLQELNLDVNQLT 247

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
             P +I +LQ L++L LS N  ++IP  F  L +L  L L  N ++ALP E+G L+ +L+
Sbjct: 248 TIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLK-NLK 306

Query: 388 ALRLDGNPLRSIRRTI 403
            L LD N L +I + I
Sbjct: 307 MLNLDANQLITIPKEI 322



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 129/289 (44%), Gaps = 39/289 (13%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  S N L  +P  IG L  L  L+L  N++ +I   I    +L + Y+ N
Sbjct: 92  IEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDN 151

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+A P E+GKL  L +L L +NQL  +  E  +L+ L  L LSNN L+  P EIGK+ 
Sbjct: 152 NQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQ 211

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L+ L L  N L T+ + +  G    L                                 
Sbjct: 212 KLQWLGLGDNQLTTIPNEI--GKLQKL--------------------------------- 236

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL+L+   L+ IP EI +   +  L LS N  + +P E     +L+ L L  N++   
Sbjct: 237 -QELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTAL 295

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 306
           P  I   L +L  L LD N L  +P +    +  LQ L L  N  S+ E
Sbjct: 296 PKEI-GKLKNLKMLNLDANQLITIPKE-IGQLQNLQTLYLRNNQFSIEE 342



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 145/325 (44%), Gaps = 43/325 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+L +L    I     L EL  + N     P+ I  L  L +L L  N++  +P 
Sbjct: 55  LDLSDNQLIILPKE-IRQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPV 113

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  + NN L  +  E+ +L  L  L L +NQL  +  E  +L+ L  L LS
Sbjct: 114 EIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLS 173

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN L+  P EIGK+  L++L L+ N L T    +  G    L                  
Sbjct: 174 NNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI--GKLQKL------------------ 213

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                           + L L    L+ IP+EI +  ++ +L+L  N +  +P E+    
Sbjct: 214 ----------------QWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQ 257

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +LQ L LS N+ K  P      L +L  L LD N L  +P +  K +  L++L+L  N +
Sbjct: 258 NLQVLFLSYNQFKTIP-VEFGQLKNLKMLSLDANQLTALPKEIGK-LKNLKMLNLDANQL 315

Query: 302 ASLPENPPFSSLPHLQELYLRRMQL 326
            ++P+      L +LQ LYLR  Q 
Sbjct: 316 ITIPK--EIGQLQNLQTLYLRNNQF 338



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 114/255 (44%), Gaps = 38/255 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  N+L  +S   I     L +L    N L   P+ IG L  L  L L  N++ +
Sbjct: 121 LQELNLWNNQLKTISKE-IEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTT 179

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
            P  I    +L E Y+ NN L+  P E+GKL KL  L L  NQL     E  +L +L  L
Sbjct: 180 FPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQEL 239

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L  N L+ +P EIG++  L+ L L+ N  +T+         P     L++         
Sbjct: 240 NLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTI---------PVEFGQLKNL-------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              K LSL+   L+A+P EI +   +  L+L  N +  +P E+ 
Sbjct: 283 -------------------KMLSLDANQLTALPKEIGKLKNLKMLNLDANQLITIPKEIG 323

Query: 240 SCASLQTLILSRNKI 254
              +LQTL L  N+ 
Sbjct: 324 QLQNLQTLYLRNNQF 338



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 109/212 (51%), Gaps = 4/212 (1%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L    L A+P +I +   +  LDLS N +  LP E+    +LQ L
Sbjct: 19  LTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 78

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 307
            L+ N+ K +P  I   L SL  L L NN L  +P +    +  LQ L+L +N      +
Sbjct: 79  FLNYNQFKTFPKEI-EQLKSLHKLYLSNNQLTILPVE-IGQLQNLQELNL-WNNQLKTIS 135

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                L +LQ+LYL   QL   P +I +LQ L+ L LS N L + P+    L +L EL L
Sbjct: 136 KEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYL 195

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           S+N ++  P E+G L+  LQ L L  N L +I
Sbjct: 196 SNNQLTTFPKEIGKLQ-KLQWLGLGDNQLTTI 226


>gi|355559885|gb|EHH16613.1| hypothetical protein EGK_11920 [Macaca mulatta]
 gi|355746906|gb|EHH51520.1| hypothetical protein EGM_10909 [Macaca fascicularis]
          Length = 560

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 178/416 (42%), Gaps = 62/416 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN L  L    I + T L E+   +N     P+ +  L  L  +DL +N+I +IP 
Sbjct: 147 LGLTGNHLKCLPKE-IVNQTKLREIYLKRNQFEAFPQELCVLYNLEIIDLDENKIGAIPE 205

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L +FY+ +N L  LPA L   S+L  LDL  N L        +LR ++ + LS
Sbjct: 206 EIGHLTGLQKFYVASNNLPVLPASLCHCSQLSVLDLSHNLLHSIPKSLTELRKMTEIGLS 265

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L  +P  I + T+L  L L    L  LR S                           
Sbjct: 266 GNRLEKVPYLICRWTSLHLLYLGNTGLHRLRGSF-------------------------- 299

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                     R  V  + L L   +L   P +I     +  L L  N I +LP EL S +
Sbjct: 300 ----------RHLVNLRCLDLSQNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLS 349

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
            L+ L L+ N+   +P+ +L SL+SL  L +  +        GFK         L+Y   
Sbjct: 350 KLKILGLTGNEFLSFPEEVL-SLASLEKLYIGQD-------QGFK---------LTY--- 389

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
            +PE+     L  L+ELY+    L   P  +  +  L +LD   N L+ +P+      +L
Sbjct: 390 -VPEH--IRKLQSLKELYIENNHLEYLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQAL 446

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
            EL L DN ++ LP  L  L  +L+ L L  NP+    + +   G + + KYLK+K
Sbjct: 447 KELLLEDNLLTHLPENLDSL-VNLKVLTLMDNPMEEPPKEVCAEGNEVIWKYLKEK 501



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 168/359 (46%), Gaps = 45/359 (12%)

Query: 74  FYM--GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 130
           F++   N +L+A+P E+   ++L  + L +NQ++E   E  +L+ + VL L  N+L  L 
Sbjct: 28  FFIDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLC 87

Query: 131 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLIT 189
           P +G +++L +L L+ NP+    SSL+     + L  LR  RL + +       KE  + 
Sbjct: 88  PALGLLSSLERLDLSYNPI--FSSSLL---VVSFLHALRELRLYQTD------LKEIPVV 136

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
           +   L    + L L G +L  +P EI    ++ ++ L RN  +  P EL    +L+ + L
Sbjct: 137 ICKNLH-HLELLGLTGNHLKCLPKEIVNQTKLREIYLKRNQFEAFPQELCVLYNLEIIDL 195

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENP 308
             NKI   P+ I   L+ L    + +N L  +P+        L +LDLS+N+  S+P++ 
Sbjct: 196 DENKIGAIPEEI-GHLTGLQKFYVASNNLPVLPA-SLCHCSQLSVLDLSHNLLHSIPKS- 252

Query: 309 PFSSLPHLQELYLRRMQLREAPTDILR-----------------------LQQLRILDLS 345
             + L  + E+ L   +L + P  I R                       L  LR LDLS
Sbjct: 253 -LTELRKMTEIGLSGNRLEKVPYLICRWTSLHLLYLGNTGLHRLRGSFRHLVNLRCLDLS 311

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
           QN L   P     L +L  L L DN I  LP ELG L   L+ L L GN   S    +L
Sbjct: 312 QNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLS-KLKILGLTGNEFLSFPEEVL 369


>gi|340375357|ref|XP_003386202.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Amphimedon
           queenslandica]
          Length = 635

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 194/409 (47%), Gaps = 43/409 (10%)

Query: 16  NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 75
           N  I +   LT LI  +N +  +P TIGSL+RL  LD+  N + S+P  I+ C  L+   
Sbjct: 261 NPAIGNLRNLTSLILRENKIRDLPSTIGSLTRLTALDVSHNHLESLPDEIANCSQLSFLQ 320

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI- 133
           + +N L+ LP  +G L  L  L L  NQL E     C    L+ + L +N+L+ LP ++ 
Sbjct: 321 LQHNDLTELPVAIGNLKSLKRLGLQYNQLSELPPSLCSCTELNEIGLESNTLTSLPDQLF 380

Query: 134 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 193
           G +T +  + L+       R+S  + P                           I+  + 
Sbjct: 381 GSVTKMSNIQLS-------RNSFTSFP---------------------------ISDPSH 406

Query: 194 LSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           L V+   L +E  +++ +P  I+ +A E+T+L L  N I  LP +  +  +L  L L  N
Sbjct: 407 L-VSVNSLMIEHNHITKVPLGIFSQATELTQLSLRDNQITTLPLDFGTWVTLTELNLGTN 465

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSS 312
           ++   P+ I   L+ L  L L NN +R +P  G   +  L+ LDL  N          S 
Sbjct: 466 QLSSIPEEI-QELTRLEILVLANNTIRTLPK-GISALRNLKELDLEGNKLEYLAT-EISY 522

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-N 371
           L  L +L ++  ++   P  +  L  L+ L   +N+L  IP     L +L EL L+DN N
Sbjct: 523 LRELTKLNVQSNRITNLPRGLGLLVNLKHLSAGENNLLEIPAEIGTLENLEELYLNDNPN 582

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           +  LP EL L +  L  + ++G PL  +   ++D G  A++++LK + P
Sbjct: 583 LQFLPYELALCK-RLALMSVEGCPLSRLPPHVVDGGPSAIIQHLKFQGP 630



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 187/382 (48%), Gaps = 19/382 (4%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  + + VL  N I   + + EL    N ++ +P  +G+L +L +L L++N +  +P+
Sbjct: 158 LDLSKSDIAVLPGN-IKEVSFIEELYLYGNRVSTLPPEVGNLKKLRKLALNENMLTDLPN 216

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +  C SL+   + +N L  +P  + +L+ L TL L  N++         LR L+ L L 
Sbjct: 217 ELKQCVSLSVLDLRHNKLREVPPVVCELASLQTLYLRFNKIVSVNPAIGNLRNLTSLILR 276

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N +  LP  IG +T L  L ++ N L +L   + N    + L+     L  N+ +E   
Sbjct: 277 ENKIRDLPSTIGSLTRLTALDVSHNHLESLPDEIANCSQLSFLQ-----LQHNDLTELPV 331

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL-SSC 241
              +L ++        K L L+   LS +P  +    E+ ++ L  N++  LP +L  S 
Sbjct: 332 AIGNLKSL--------KRLGLQYNQLSELPPSLCSCTELNEIGLESNTLTSLPDQLFGSV 383

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 300
             +  + LSRN    +P +  + L S++ L +++N + +VP   F     L  L L  N 
Sbjct: 384 TKMSNIQLSRNSFTSFPISDPSHLVSVNSLMIEHNHITKVPLGIFSQATELTQLSLRDNQ 443

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
           I +LP +  F +   L EL L   QL   P +I  L +L IL L+ N+++++P+G   L 
Sbjct: 444 ITTLPLD--FGTWVTLTELNLGTNQLSSIPEEIQELTRLEILVLANNTIRTLPKGISALR 501

Query: 361 SLTELDLSDNNISALPPELGLL 382
           +L ELDL  N +  L  E+  L
Sbjct: 502 NLKELDLEGNKLEYLATEISYL 523



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 174/371 (46%), Gaps = 22/371 (5%)

Query: 49  IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 108
           I LDL ++ I  +P +I     + E Y+  N +S LP E+G L KL  L L+ N L +  
Sbjct: 156 IILDLSKSDIAVLPGNIKEVSFIEELYLYGNRVSTLPPEVGNLKKLRKLALNENMLTDLP 215

Query: 109 VEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN--GPTPALL 165
            E  Q + LSVLDL +N L  +PP + ++ +L+ L L  N + ++  ++ N    T  +L
Sbjct: 216 NELKQCVSLSVLDLRHNKLREVPPVVCELASLQTLYLRFNKIVSVNPAIGNLRNLTSLIL 275

Query: 166 KYLRSR-LPENEDSEASTTKEDL-----------ITMATRLSVTSKELSLEGMNLSAIPS 213
           +  + R LP    S    T  D+           I   ++LS     L L+  +L+ +P 
Sbjct: 276 RENKIRDLPSTIGSLTRLTALDVSHNHLESLPDEIANCSQLSF----LQLQHNDLTELPV 331

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
            I     + +L L  N + ELPP L SC  L  + L  N +   PD +  S++ +S ++L
Sbjct: 332 AIGNLKSLKRLGLQYNQLSELPPSLCSCTELNEIGLESNTLTSLPDQLFGSVTKMSNIQL 391

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
             N     P      +  +  L + +N I  +P    FS    L +L LR  Q+   P D
Sbjct: 392 SRNSFTSFPISDPSHLVSVNSLMIEHNHITKVPLG-IFSQATELTQLSLRDNQITTLPLD 450

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
                 L  L+L  N L SIPE  + LT L  L L++N I  LP  +  L  +L+ L L+
Sbjct: 451 FGTWVTLTELNLGTNQLSSIPEEIQELTRLEILVLANNTIRTLPKGISALR-NLKELDLE 509

Query: 393 GNPLRSIRRTI 403
           GN L  +   I
Sbjct: 510 GNKLEYLATEI 520



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 116/242 (47%), Gaps = 30/242 (12%)

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSE 214
           V  PT  + K + S+  E +      +K D+  +   +   S  +EL L G  +S +P E
Sbjct: 136 VQAPTADIKKKI-SKCKEEKSIILDLSKSDIAVLPGNIKEVSFIEELYLYGNRVSTLPPE 194

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           +    ++ KL L+ N + +LP EL  C SL  L L  NK+++ P  ++  L+SL  L L 
Sbjct: 195 VGNLKKLRKLALNENMLTDLPNELKQCVSLSVLDLRHNKLREVP-PVVCELASLQTLYLR 253

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
            N +  V                         NP   +L +L  L LR  ++R+ P+ I 
Sbjct: 254 FNKIVSV-------------------------NPAIGNLRNLTSLILRENKIRDLPSTIG 288

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            L +L  LD+S N L+S+P+   N + L+ L L  N+++ LP  +G L+ SL+ L L  N
Sbjct: 289 SLTRLTALDVSHNHLESLPDEIANCSQLSFLQLQHNDLTELPVAIGNLK-SLKRLGLQYN 347

Query: 395 PL 396
            L
Sbjct: 348 QL 349



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 128/279 (45%), Gaps = 29/279 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD---LHQNR 57
           ++++ +E N LT L + L  S T ++ +  S+N     P  I   S L+ ++   +  N 
Sbjct: 362 LNEIGLESNTLTSLPDQLFGSVTKMSNIQLSRNSFTSFP--ISDPSHLVSVNSLMIEHNH 419

Query: 58  ILSIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-R 115
           I  +P  I S    L +  + +N ++ LP + G    L  L+L +NQL     E  +L R
Sbjct: 420 ITKVPLGIFSQATELTQLSLRDNQITTLPLDFGTWVTLTELNLGTNQLSSIPEEIQELTR 479

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L +L L+NN++  LP  I  +  L++L L GN L  L +          + YLR     N
Sbjct: 480 LEILVLANNTIRTLPKGISALRNLKELDLEGNKLEYLATE---------ISYLRELTKLN 530

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQEL 234
             S   T     +     L V  K LS    NL  IP+EI     + +L L+ N ++Q L
Sbjct: 531 VQSNRITN----LPRGLGLLVNLKHLSAGENNLLEIPAEIGTLENLEELYLNDNPNLQFL 586

Query: 235 PPELSSCA-----SLQTLILSR---NKIKDWPDAILTSL 265
           P EL+ C      S++   LSR   + +   P AI+  L
Sbjct: 587 PYELALCKRLALMSVEGCPLSRLPPHVVDGGPSAIIQHL 625



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 129/281 (45%), Gaps = 42/281 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRIL 59
           + +L ++ N+L+ L  +L  S T L E+    N L  +P+ + GS++++  + L +N   
Sbjct: 339 LKRLGLQYNQLSELPPSL-CSCTELNEIGLESNTLTSLPDQLFGSVTKMSNIQLSRNSFT 397

Query: 60  SIP-SSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVE-ACQLRL 116
           S P S  S   S+    + +N ++ +P     + ++L  L L  NQ+    ++    + L
Sbjct: 398 SFPISDPSHLVSVNSLMIEHNHITKVPLGIFSQATELTQLSLRDNQITTLPLDFGTWVTL 457

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 176
           + L+L  N LS +P EI ++T L  L+L  N +RTL         P  +  LR+      
Sbjct: 458 TELNLGTNQLSSIPEEIQELTRLEILVLANNTIRTL---------PKGISALRNL----- 503

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
                                 KEL LEG  L  + +EI    E+TKL++  N I  LP 
Sbjct: 504 ----------------------KELDLEGNKLEYLATEISYLRELTKLNVQSNRITNLPR 541

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
            L    +L+ L    N + + P  I T L +L  L L++NP
Sbjct: 542 GLGLLVNLKHLSAGENNLLEIPAEIGT-LENLEELYLNDNP 581


>gi|417764090|ref|ZP_12412063.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353922|gb|EJP06075.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 356

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 167/359 (46%), Gaps = 69/359 (19%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L +L  L L  N L+ LP EIG++  L+ L L+ N ++T+   +        L+ L+
Sbjct: 113 IEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEK------LQKLQ 166

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           S                              L L+   L+ +P EI +   +  LDLS N
Sbjct: 167 S------------------------------LGLDNNQLTTLPQEIGQLQNLQSLDLSTN 196

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  +     K+I
Sbjct: 197 RLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTLS----KEI 251

Query: 290 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
             LQ                     +L+ L LR  QL   P +I +L+ L++LDL  N L
Sbjct: 252 EQLQ---------------------NLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQL 290

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS-----IRRTI 403
            ++PEG   L +L  LDL  N ++ LP E+G L+ +LQ L L+ N L S     IR+ I
Sbjct: 291 TTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQ-NLQELFLNNNQLSSQEKKRIRKLI 348



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 157/325 (48%), Gaps = 43/325 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+   L    I     L EL  +KN L  +P+ IG L  L +L+L  N+I +IP 
Sbjct: 53  LDLSANRFKTLPKE-IGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I     L   Y+  N L+ LP E+G+L  L +L+L  NQ+K    E  +L +L  L L 
Sbjct: 112 EIEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLD 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN L+ LP EIG++  L+ L L+ N L TL         P  + +L++            
Sbjct: 172 NNQLTTLPQEIGQLQNLQSLDLSTNRLTTL---------PQEIGHLQNL----------- 211

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
             +DL  ++ +L++              +P+EI +   +  L+L  N +  L  E+    
Sbjct: 212 --QDLYLVSNQLTI--------------LPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQ 255

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +L++L L  N++  +P  I   L +L  L L +N L  +P +G   +  LQ LDL  N +
Sbjct: 256 NLKSLDLRSNQLTIFPKEI-GQLKNLQVLDLGSNQLTTLP-EGIGQLKNLQTLDLDSNQL 313

Query: 302 ASLPENPPFSSLPHLQELYLRRMQL 326
            +LP+      L +LQEL+L   QL
Sbjct: 314 TTLPQ--EIGQLQNLQELFLNNNQL 336


>gi|3252981|gb|AAC40175.1| Ras-binding protein SUR-8 [Mus musculus]
          Length = 582

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 193/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  L KL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  ++ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 283 --------------LSSLNR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLSTLPRGI 490



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 109/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +P  + E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +LP L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLPKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N++  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLNRLGLRYNRLSAIPRSL 303



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN LS LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLSTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 149/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLSTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534


>gi|195110657|ref|XP_001999896.1| GI22824 [Drosophila mojavensis]
 gi|193916490|gb|EDW15357.1| GI22824 [Drosophila mojavensis]
          Length = 471

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 180/378 (47%), Gaps = 48/378 (12%)

Query: 47  RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 106
           R+  LDL ++ I  +P+++  C  L E Y+ +N +  LPAE+G L  L  L L+ N L  
Sbjct: 134 RIKLLDLSKSSITVLPTTVRECVHLTELYLYSNKIVQLPAEIGCLVNLRNLALNENSLTS 193

Query: 107 Y--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164
               +  C  +L VLDL +N L+ +PP I ++ +L  L                      
Sbjct: 194 LPESLRNCT-QLKVLDLRHNKLAEIPPVIYQLRSLTTL---------------------- 230

Query: 165 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
             YLR        +  +   +DL     R  V    LSL    +  + S I     +T L
Sbjct: 231 --YLRF-------NRITAVADDL-----RQLVNLTMLSLRENKIKELGSAIGSLVNLTTL 276

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           D+S N ++ LP ++ +C +L  L L  N++ D PD+I  +L  L    L NN L+++P +
Sbjct: 277 DVSHNHLEHLPDDIGNCVNLNALDLQHNELLDIPDSIGNNLEILI---LSNNMLKKIP-N 332

Query: 285 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
              ++  L+ILDL  N I  LP       L  LQ L L+  Q+   P  I  L  L  L 
Sbjct: 333 TIGNLRKLRILDLEENRIEVLPHE--VGLLHELQRLILQTNQITMLPRSIGHLSNLTHLS 390

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRT 402
           +S+N+LQ +PE   +L SL  L ++ N  +  LP EL L + +L+ L +D  PL +I   
Sbjct: 391 VSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQ-NLKYLNIDKCPLGTIPPE 449

Query: 403 ILDRGTKAVLKYLKDKIP 420
           I   G   VL++LK   P
Sbjct: 450 IQAGGPSLVLQWLKMHSP 467



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 137/295 (46%), Gaps = 14/295 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NK+  L    I     L  L  ++N L  +PE++ + ++L  LDL  N++  
Sbjct: 158 LTELYLYSNKIVQLPAE-IGCLVNLRNLALNENSLTSLPESLRNCTQLKVLDLRHNKLAE 216

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  I    SL   Y+  N ++A+  +L +L  L  L L  N++KE       L  L+ L
Sbjct: 217 IPPVIYQLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIKELGSAIGSLVNLTTL 276

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+S+N L  LP +IG    L  L L  N L  +  S+  G    +L    + L +  ++ 
Sbjct: 277 DVSHNHLEHLPDDIGNCVNLNALDLQHNELLDIPDSI--GNNLEILILSNNMLKKIPNTI 334

Query: 180 ASTTKEDLITM-ATRLSVTSKELS---------LEGMNLSAIPSEIWEAGEITKLDLSRN 229
            +  K  ++ +   R+ V   E+          L+   ++ +P  I     +T L +S N
Sbjct: 335 GNLRKLRILDLEENRIEVLPHEVGLLHELQRLILQTNQITMLPRSIGHLSNLTHLSVSEN 394

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           ++Q LP E+ S  SL+ L +++N   +     L    +L  L +D  PL  +P +
Sbjct: 395 NLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPLGTIPPE 449



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 4/131 (3%)

Query: 292 LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
           +++LDLS + I  LP         HL ELYL   ++ + P +I  L  LR L L++NSL 
Sbjct: 135 IKLLDLSKSSITVLPTT--VRECVHLTELYLYSNKIVQLPAEIGCLVNLRNLALNENSLT 192

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKA 410
           S+PE  +N T L  LDL  N ++ +PP +  L  SL  L L  N + ++   +       
Sbjct: 193 SLPESLRNCTQLKVLDLRHNKLAEIPPVIYQLR-SLTTLYLRFNRITAVADDLRQLVNLT 251

Query: 411 VLKYLKDKIPE 421
           +L   ++KI E
Sbjct: 252 MLSLRENKIKE 262


>gi|344274389|ref|XP_003408999.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Loxodonta africana]
          Length = 581

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 193/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 124 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 182

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 183 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIRENKIKQLPAEIGELCNLITL 242

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG    +  L L  N L  L  ++ N                     
Sbjct: 243 DVAHNQLEHLPKEIGNCIQITNLDLQHNELLDLPDTIGN--------------------- 281

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  S+ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 282 --------------LSSLSR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPETLL 326

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 327 SSLVKLNSLTLARNCFQLYPMGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 386

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 387 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 444

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 445 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 489



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 101 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 160

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 161 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLI 217

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N   +T LDL  N +  LP 
Sbjct: 218 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCIQITNLDLQHNELLDLPD 277

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 278 TIGNLS-SLSRLGLRYNRLSAIPRSL 302



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 359 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 418

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 419 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 478

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 479 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 508


>gi|402861004|ref|XP_003894903.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4,
           partial [Papio anubis]
          Length = 510

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 178/416 (42%), Gaps = 62/416 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN L  L    I + T L E+   +N     P+ +  L  L  +DL +N+I +IP 
Sbjct: 147 LGLTGNHLKCLPKE-IVNQTKLREIYLKRNQFEAFPQELCVLYNLEIIDLDENKIGAIPE 205

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L +FY+ +N L  LPA L   S+L  LDL  N L        +LR ++ + LS
Sbjct: 206 EIGHLTGLQKFYVASNNLPVLPASLCHCSQLSVLDLSHNLLHSIPKSLTELRKMTEIGLS 265

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L  +P  I + T+L  L L    L  LR S                           
Sbjct: 266 GNPLEKVPYLICRWTSLHLLYLGNTGLHRLRGSF-------------------------- 299

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                     R  V  + L L   +L   P +I     +  L L  N I +LP EL S +
Sbjct: 300 ----------RHLVNLRCLDLSQNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLS 349

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
            L+ L L+ N+   +P+ +L SL+SL  L +  +        GFK         L+Y   
Sbjct: 350 KLKILGLTGNEFLSFPEEVL-SLASLEKLYIGQD-------QGFK---------LTY--- 389

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
            +PE+     L  L+ELY+    L   P  +  +  L +LD   N L+ +P+      +L
Sbjct: 390 -VPEH--IRKLQSLKELYIENNHLEYLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQAL 446

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
            EL L DN ++ LP  L  L  +L+ L L  NP+    + +   G + + KYLK+K
Sbjct: 447 KELLLEDNLLTHLPENLDSL-VNLKVLTLMDNPMEEPPKEVCAEGNEVIWKYLKEK 501



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 165/357 (46%), Gaps = 41/357 (11%)

Query: 74  FYM--GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 130
           F++   N +L+A+P E+   ++L  + L +NQ++E   E  +L+ + VL L  N+L  L 
Sbjct: 28  FFIDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLC 87

Query: 131 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLIT 189
           P +G +++L +L L+ NP+    SSL+     + L  LR  RL + +       KE  + 
Sbjct: 88  PALGLLSSLERLDLSYNPI--FSSSLL---VVSFLHALRELRLYQTD------LKEIPVV 136

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
           +   L    + L L G +L  +P EI    ++ ++ L RN  +  P EL    +L+ + L
Sbjct: 137 ICKNLH-HLELLGLTGNHLKCLPKEIVNQTKLREIYLKRNQFEAFPQELCVLYNLEIIDL 195

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPEN- 307
             NKI   P+ I   L+ L    + +N L  +P+        L +LDLS+N+  S+P++ 
Sbjct: 196 DENKIGAIPEEI-GHLTGLQKFYVASNNLPVLPA-SLCHCSQLSVLDLSHNLLHSIPKSL 253

Query: 308 -------------PPFSSLPHL-------QELYLRRMQLREAPTDILRLQQLRILDLSQN 347
                         P   +P+L         LYL    L         L  LR LDLSQN
Sbjct: 254 TELRKMTEIGLSGNPLEKVPYLICRWTSLHLLYLGNTGLHRLRGSFRHLVNLRCLDLSQN 313

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
            L   P     L +L  L L DN I  LP ELG L   L+ L L GN   S    +L
Sbjct: 314 HLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLS-KLKILGLTGNEFLSFPEEVL 369



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 130/285 (45%), Gaps = 13/285 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + K  V  N L VL  +L    + L+ L  S NLL+ +P+++  L ++  + L  N +  
Sbjct: 213 LQKFYVASNNLPVLPASL-CHCSQLSVLDLSHNLLHSIPKSLTELRKMTEIGLSGNPLEK 271

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    SL   Y+GN  L  L      L  L  LDL  N L    ++ C L+ L VL
Sbjct: 272 VPYLICRWTSLHLLYLGNTGLHRLRGSFRHLVNLRCLDLSQNHLDHCPLQICALKNLEVL 331

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +N +  LP E+G ++ L+ L LTGN         ++ P   L      +L   +D  
Sbjct: 332 GLDDNKIGQLPSELGSLSKLKILGLTGN-------EFLSFPEEVLSLASLEKLYIGQDQG 384

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
              T    +    R   + KEL +E  +L  +P  +     +  LD   N +++LP  + 
Sbjct: 385 FKLT---YVPEHIRKLQSLKELYIENNHLEYLPVSLGSMPNLEVLDCRHNLLKQLPDAIC 441

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
              +L+ L+L  N +   P+  L SL +L  L L +NP+ + P +
Sbjct: 442 QAQALKELLLEDNLLTHLPEN-LDSLVNLKVLTLMDNPMEEPPKE 485


>gi|20071327|gb|AAH26364.1| Shoc2 protein [Mus musculus]
          Length = 524

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 184/388 (47%), Gaps = 42/388 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +     L  L  S+N L  +P+++ +L +L  LDL  N++  IPS +    SL   Y+  
Sbjct: 142 VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRF 201

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++ +  ++  L KL  L +  N++K+   E  +L  L  LD+++N L  LP EIG  T
Sbjct: 202 NRITTVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCT 261

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            +  L L  N L  L  ++ N                                   LS  
Sbjct: 262 QITNLDLQHNDLLDLPDTIGN-----------------------------------LSSL 286

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKD 256
           ++ L L    LSAIP  + +   + +L+L  N+I  LP  L SS   L +L L+RN  + 
Sbjct: 287 NR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQL 345

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
           +P    +  S++  L +++N + ++P   F    +L  L++  N + SLP +  F +   
Sbjct: 346 YPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD--FGTWTS 403

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           + EL L   QL + P D+  L  L +L LS N L+ +P G  NL  L ELDL +N + +L
Sbjct: 404 MVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESL 463

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P E+  L+  LQ L L  N L ++ R I
Sbjct: 464 PNEIAYLK-DLQKLVLTNNQLSTLPRGI 490



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 109/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +P  + E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +LP L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLPKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N++  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLNRLGLRYNRLSAIPRSL 303



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN LS LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLSTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 19/285 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P +
Sbjct: 469 YLKDLQKLVLTNNQLSTLPRGI-GHLTNLTHLGLGENLLTHLPEE 512



 Score = 41.6 bits (96), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 24/113 (21%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M +L++  N+LT +  + ++    L  LI S NLL  +P  +G+L +L  LDL +N++ S
Sbjct: 404 MVELNLATNQLTKIPED-VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462

Query: 61  IPSSIS-----------------------GCCSLAEFYMGNNALSALPAELGK 90
           +P+ I+                          +L    +G N L+ LP E+G+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGR 515


>gi|31543701|ref|NP_062632.2| leucine-rich repeat protein SHOC-2 [Mus musculus]
 gi|270341361|ref|NP_001161977.1| leucine-rich repeat protein SHOC-2 [Mus musculus]
 gi|51338746|sp|O88520.2|SHOC2_MOUSE RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|26346735|dbj|BAC37016.1| unnamed protein product [Mus musculus]
 gi|29437101|gb|AAH49775.1| Soc-2 (suppressor of clear) homolog (C. elegans) [Mus musculus]
 gi|52789459|gb|AAH83060.1| Shoc2 protein [Mus musculus]
 gi|74138728|dbj|BAE27179.1| unnamed protein product [Mus musculus]
 gi|94962414|gb|ABF48505.1| Shoc2 [Mus musculus]
 gi|148669769|gb|EDL01716.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_b
           [Mus musculus]
          Length = 582

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 193/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  L KL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  ++ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 283 --------------LSSLNR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLSTLPRGI 490



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 109/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +P  + E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +LP L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLPKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N++  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLNRLGLRYNRLSAIPRSL 303



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN LS LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLSTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 149/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLSTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534


>gi|148669768|gb|EDL01715.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_a
           [Mus musculus]
          Length = 524

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 193/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  L KL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                         LS  ++ L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 283 --------------LSSLNR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLSTLPRGI 490



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 109/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +P  + E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +LP L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLPKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N++  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLNRLGLRYNRLSAIPRSL 303



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN LS LP  IG +T L  L L  N L  L
Sbjct: 480 NNQLSTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 19/285 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  +  
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 422 SGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P +
Sbjct: 469 YLKDLQKLVLTNNQLSTLPRGI-GHLTNLTHLGLGENLLTHLPEE 512



 Score = 41.6 bits (96), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 24/113 (21%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M +L++  N+LT +  + ++    L  LI S NLL  +P  +G+L +L  LDL +N++ S
Sbjct: 404 MVELNLATNQLTKIPED-VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLES 462

Query: 61  IPSSIS-----------------------GCCSLAEFYMGNNALSALPAELGK 90
           +P+ I+                          +L    +G N L+ LP E+G+
Sbjct: 463 LPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGR 515


>gi|392396973|ref|YP_006433574.1| hypothetical protein Fleli_1349 [Flexibacter litoralis DSM 6794]
 gi|390528051|gb|AFM03781.1| leucine-rich repeat (LRR) protein [Flexibacter litoralis DSM 6794]
          Length = 682

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 168/360 (46%), Gaps = 53/360 (14%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           LT L    N  +  P  + ++  L +LD+  N I  I  SI+    L E  +    L+  
Sbjct: 149 LTSLSLRNNKFDVFPVGVTNIKSLKKLDIDTNPIKKIHESIANLIELEELDISGMELTEF 208

Query: 85  PAELGKLSKLGTLDLHSNQLK------EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           P E+  L+KL +L++  NQLK      E   E  +L +   D SN SL      I K+T 
Sbjct: 209 PLEIVGLTKLRSLNVSQNQLKTIPQDIEKLTELEELDIGFNDYSNGSLDA----ISKLTK 264

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L  L +  + L+ +   L N      LK L            S +  +LI    ++S   
Sbjct: 265 LSFLSVVSSELKDISFQLEN------LKKLEW---------LSFSYNELIEFPNQISKLD 309

Query: 199 --KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             KEL L+   ++ IP+EI    ++T+L L  N I ELP ++S   +L+ L LS NK   
Sbjct: 310 SLKELMLDDNQITTIPNEIGNLKKLTRLYLEENKISELPSQISELQNLERLRLSDNKFTS 369

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 316
           +P  I T+L +L  LKL  N + ++PS         QI                S+L  L
Sbjct: 370 FPMQI-TNLENLKELKLSKNKINKLPS---------QI----------------SNLKKL 403

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           ++LYL   +  E PT+IL L +L++L ++ N L+S+P     L  L ELDL  N +++ P
Sbjct: 404 EDLYLNHNKFEELPTEILELNELKVLQINHNKLESLPNTISILDKLEELDLGYNRLTSFP 463



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 203/425 (47%), Gaps = 47/425 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD++ N +  +  + IA+   L EL  S   L   P  I  L++L  L++ QN++ +
Sbjct: 172 LKKLDIDTNPIKKIHES-IANLIELEELDISGMELTEFPLEIVGLTKLRSLNVSQNQLKT 230

Query: 61  IPSSISGCCSLAEFYMGNNALS--ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 117
           IP  I     L E  +G N  S  +L A + KL+KL  L + S++LK+   +   L+ L 
Sbjct: 231 IPQDIEKLTELEELDIGFNDYSNGSLDA-ISKLTKLSFLSVVSSELKDISFQLENLKKLE 289

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            L  S N L   P +I K+ +L++L+L  N + T+ + + N     L K  R  L EN+ 
Sbjct: 290 WLSFSYNELIEFPNQISKLDSLKELMLDDNQITTIPNEIGN-----LKKLTRLYLEENK- 343

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                                         +S +PS+I E   + +L LS N     P +
Sbjct: 344 ------------------------------ISELPSQISELQNLERLRLSDNKFTSFPMQ 373

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           +++  +L+ L LS+NKI   P  I ++L  L  L L++N   ++P++   ++  L++L +
Sbjct: 374 ITNLENLKELKLSKNKINKLPSQI-SNLKKLEDLYLNHNKFEELPTEIL-ELNELKVLQI 431

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
           ++N + SLP     S L  L+EL L   +L   P  IL+ + L  L L ++ L+++P+G 
Sbjct: 432 NHNKLESLPN--TISILDKLEELDLGYNRLTSFPLVILKFENLGRLSLEKSELKTLPKGI 489

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
             L  +  L+L  N     P E+ L    +  L LD N + SI   I       VL   +
Sbjct: 490 TKLKKIRMLNLDSNRFEVFPIEI-LEFQKISYLSLDDNKISSIPNEISKLKRMYVLSLSR 548

Query: 417 DKIPE 421
           +K+ E
Sbjct: 549 NKLSE 553



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 125/274 (45%), Gaps = 25/274 (9%)

Query: 1   MSKLD------VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 54
           +SKLD      ++ N++T + N  I +   LT L   +N ++ +P  I  L  L RL L 
Sbjct: 305 ISKLDSLKELMLDDNQITTIPNE-IGNLKKLTRLYLEENKISELPSQISELQNLERLRLS 363

Query: 55  QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 114
            N+  S P  I+   +L E  +  N ++ LP+++  L KL  L L+ N+ +E   E  +L
Sbjct: 364 DNKFTSFPMQITNLENLKELKLSKNKINKLPSQISNLKKLEDLYLNHNKFEELPTEILEL 423

Query: 115 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
             L VL +++N L  LP  I  +  L +L L  N L +    ++       L   +S L 
Sbjct: 424 NELKVLQINHNKLESLPNTISILDKLEELDLGYNRLTSFPLVILKFENLGRLSLEKSEL- 482

Query: 174 ENEDSEASTTKEDLITM----ATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGE 220
             +      TK   I M    + R  V   E         LSL+   +S+IP+EI +   
Sbjct: 483 --KTLPKGITKLKKIRMLNLDSNRFEVFPIEILEFQKISYLSLDDNKISSIPNEISKLKR 540

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
           +  L LSRN + EL   L     L ++ L  N+I
Sbjct: 541 MYVLSLSRNKLSELSF-LYKFPRLSSVYLDYNRI 573


>gi|126338397|ref|XP_001365516.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like [Monodelphis domestica]
          Length = 570

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 180/400 (45%), Gaps = 59/400 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I + T L E+    N     P+ + +L  L  +DL QNRI  IP  IS    L +F++ +
Sbjct: 168 IVNQTKLKEIYLQDNHFENFPQELCALYNLEIIDLEQNRIPVIPDEISSLTKLEKFFIAS 227

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N ++ LP  LG  +KL                       VLD+SNN L  LP  + ++T 
Sbjct: 228 NVVTVLPDSLGSCNKL----------------------IVLDVSNNYLHNLPSTLKELTE 265

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           +R+L L+GN +  +   L+   T   L Y+++          +  K    +    L+VT 
Sbjct: 266 IRELGLSGNCMEKV-PRLICKWTMLHLLYMKN----------TCLKTLRRSFKRLLNVTI 314

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
            +LS         P EI     +  L L  N I ++PPE+ +   L+ L L+ N    +P
Sbjct: 315 LDLSQNYFEF--FPQEICALKNLELLSLDDNRICQVPPEVVNLVKLKALSLTGNNFMIFP 372

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 318
           + +L  + SL  L L                      D    +  + EN     L +L+E
Sbjct: 373 EEVLL-IESLEQLYLGQ--------------------DQGTKLTYISEN--IMKLTNLKE 409

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           LYL    L   P  +  ++ L +LD   N L+ +P+    +++L  L L +N ++ALP +
Sbjct: 410 LYLENNSLENLPDSLGSIKTLEMLDCHNNQLKELPDSICEISALKTLLLENNQLTALPLK 469

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           +  L+ +LQ L L+GNP+ +    +L  G + + KYLK++
Sbjct: 470 MDELQ-NLQVLNLEGNPMEAPPPEVLHAGIEEIWKYLKER 508



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 3/174 (1%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L  I  EI     +  L L+ N ++ +  +L   ++LQ+L  S N +      ++  L +
Sbjct: 67  LEGIAREIHNLTNLKILYLNNNDMKLICKDLGELSNLQSLDFSNNPLVPTTLPVIAHLRA 126

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L+L    L + P    K +  L++L LS+N +  LP+     +   L+E+YL+    
Sbjct: 127 LRQLRLYKIQLEKFPIQICKCLHHLELLGLSHNKLKDLPKE--IVNQTKLKEIYLQDNHF 184

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
              P ++  L  L I+DL QN +  IP+   +LT L +  ++ N ++ LP  LG
Sbjct: 185 ENFPQELCALYNLEIIDLEQNRIPVIPDEISSLTKLEKFFIASNVVTVLPDSLG 238



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 1/96 (1%)

Query: 7   EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 66
           +G KLT +S N I   T L EL    N L  +P+++GS+  L  LD H N++  +P SI 
Sbjct: 390 QGTKLTYISEN-IMKLTNLKELYLENNSLENLPDSLGSIKTLEMLDCHNNQLKELPDSIC 448

Query: 67  GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 102
              +L    + NN L+ALP ++ +L  L  L+L  N
Sbjct: 449 EISALKTLLLENNQLTALPLKMDELQNLQVLNLEGN 484


>gi|326428302|gb|EGD73872.1| leucine rich repeat containing protein 40 [Salpingoeca sp. ATCC
           50818]
          Length = 535

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 188/392 (47%), Gaps = 66/392 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N L  L  + IA  +++TEL    N L  +P ++ +++ L RLDL  N++ +
Sbjct: 181 LRRLALNKNNLQTLPQS-IAQLSLITELEIIHNSLTAVPLSLENMASLTRLDLRYNKLTA 239

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKL-SKLGTLDLHSNQLKEYCVEACQLR-LSV 118
           +P  +    +L E  +G N+++ L      L S L  LD+  N+L++       L+ L  
Sbjct: 240 LPR-LCNLKALRELSLGFNSITTLGDIRATLPSGLCILDVRDNKLRDLSPSIVHLQALER 298

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE-- 176
           LD++NN L+ LPPE+G +  L+ ++L GNP+R+LR  ++   T  +LKYLRSR+ E +  
Sbjct: 299 LDVTNNDLATLPPELGVLPKLKSIVLDGNPMRSLRRDIIARGTQGILKYLRSRMTEEQLA 358

Query: 177 -------DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDL 226
                   SEAS  +++ +  A   +  + +LS + + L  +PS+  EA +   I+KL L
Sbjct: 359 ELTSGSVQSEASAQRQEAVAKAEMKASATLDLSEQKLQL--VPSKQLEAAQGAGISKLVL 416

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
            +N +Q LP                       D + ++L+ L                GF
Sbjct: 417 RKNLLQNLPA--------------------GTDCLASTLTELDL--------------GF 442

Query: 287 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
             I  L              +P  + L +L  L L+  QL   P++++ L  LR L LS 
Sbjct: 443 NKIDTL--------------SPSIALLGNLTVLDLQGNQLTSLPSELISLASLRDLILSF 488

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           N  + +PE   +L +L  L ++DN I  L P 
Sbjct: 489 NRFRQLPECVYDLLALENLVVNDNAIDTLDPH 520



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 153/314 (48%), Gaps = 56/314 (17%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L++LD  NN L  +  ++G +  L+ L    N LR +   +        L++L+S     
Sbjct: 89  LTLLDAHNNQLERVSDKLGALQELKALNFAHNKLRAIPDGVYA------LRHLKS----- 137

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                    L L G  +  +   I    ++ +LDL+ N ++ LP
Sbjct: 138 -------------------------LRLTGNQIQDVDERIGALTDLEELDLAENQLRSLP 172

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
             L   A L+ L L++N ++  P +I   LS ++ L++ +N L  VP    +++  L  L
Sbjct: 173 ESLGRLAQLRRLALNKNNLQTLPQSI-AQLSLITELEIIHNSLTAVPL-SLENMASLTRL 230

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR--------ILDLSQN 347
           DL YN   L   P   +L  L+EL L           I  L  +R        ILD+  N
Sbjct: 231 DLRYN--KLTALPRLCNLKALRELSL-------GFNSITTLGDIRATLPSGLCILDVRDN 281

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
            L+ +     +L +L  LD+++N+++ LPPELG+L P L+++ LDGNP+RS+RR I+ RG
Sbjct: 282 KLRDLSPSIVHLQALERLDVTNNDLATLPPELGVL-PKLKSIVLDGNPMRSLRRDIIARG 340

Query: 408 TKAVLKYLKDKIPE 421
           T+ +LKYL+ ++ E
Sbjct: 341 TQGILKYLRSRMTE 354



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 184/414 (44%), Gaps = 39/414 (9%)

Query: 22  W--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W  T L  LI + N +  +P+ +  L  L  LD H N++  +   +     L      +N
Sbjct: 61  WESTDLQRLIVASNEIREIPDDVELLGALTLLDAHNNQLERVSDKLGALQELKALNFAHN 120

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
            L A+P  +  L  L +L L  NQ+++       L  L  LDL+ N L  LP  +G++  
Sbjct: 121 KLRAIPDGVYALRHLKSLRLTGNQIQDVDERIGALTDLEELDLAENQLRSLPESLGRLAQ 180

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL---PENEDSEASTTKEDL----ITMA 191
           LR+L L  N L+TL  S+        L+ + + L   P + ++ AS T+ DL    +T  
Sbjct: 181 LRRLALNKNNLQTLPQSIAQLSLITELEIIHNSLTAVPLSLENMASLTRLDLRYNKLTAL 240

Query: 192 TRLSVTS--KELSLEGMNLSAIPSEIWEA--GEITKLDLSRNSIQELPPELSSCASLQTL 247
            RL      +ELSL G N      +I       +  LD+  N +++L P +    +L+ L
Sbjct: 241 PRLCNLKALRELSL-GFNSITTLGDIRATLPSGLCILDVRDNKLRDLSPSIVHLQALERL 299

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD----GFKDI-PMLQILDLSYNIA 302
            ++ N +   P   L  L  L  + LD NP+R +  D    G + I   L+       +A
Sbjct: 300 DVTNNDLATLPPE-LGVLPKLKSIVLDGNPMRSLRRDIIARGTQGILKYLRSRMTEEQLA 358

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI----------------LDLSQ 346
            L      S     ++  + + +++ + T  L  Q+L++                L L +
Sbjct: 359 ELTSGSVQSEASAQRQEAVAKAEMKASATLDLSEQKLQLVPSKQLEAAQGAGISKLVLRK 418

Query: 347 NSLQSIPEGFKNLTS-LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           N LQ++P G   L S LTELDL  N I  L P + LL  +L  L L GN L S+
Sbjct: 419 NLLQNLPAGTDCLASTLTELDLGFNKIDTLSPSIALL-GNLTVLDLQGNQLTSL 471


>gi|358339444|dbj|GAA47507.1| leucine-rich repeat protein soc-2 homolog [Clonorchis sinensis]
          Length = 620

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 211/495 (42%), Gaps = 99/495 (20%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+   +L  L N +      LTEL    N L  +P +IG L+ L RL + QN +  +P 
Sbjct: 138 LDLSHCELQQLPNGIFDDLPGLTELYLYTNKLTSLPASIGQLAHLRRLSIQQNMLARLPK 197

Query: 64  SISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEY----------CVEAC 112
            ++    L    + +N L   LP  L  L +L +L L  N+L             C+   
Sbjct: 198 EMAKLTGLEVLDLRHNRLEGNLPECLPSLKQLKSLFLKFNKLSNISGIENLKHLTCLVLG 257

Query: 113 Q--------------LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
           Q                L+ LDLSNN ++ LP  IG  T L+ L L  N L+ L +S+ N
Sbjct: 258 QNSLKNDLPDVIGQLTCLTTLDLSNNQITSLPENIGNCTALKSLNLQHNQLQRLPNSIGN 317

Query: 159 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKELSLEGMNLSAIPSE-I 215
                 L+ L         S+ S     L+ +   L+  V   E ++E   LS++P E +
Sbjct: 318 ------LRNL---------SKLSIKYNQLVEIPQSLANCVLLDEFNVESNQLSSLPDELL 362

Query: 216 WEAGEITKLDLSRNSIQELPP----ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
                +  + LSRN   + P     +  +C SL    +  N+I   P +I +  + L+ L
Sbjct: 363 LSLPNLVNITLSRNHFTDFPTGGPGQFKNCISLN---VDYNQITTIPQSIFSEATRLNRL 419

Query: 272 KL-DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 330
            L DNN    VPSD      ++++   S  + SLP       L HL+ L L   QLR  P
Sbjct: 420 NLCDNNITCLVPSDLHHWSSVVELNLGSNRLTSLPAE--IGELQHLEVLELNFNQLRVLP 477

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL----------------------- 367
            +I +L +LRIL L  N L+S+PE    L SL EL++                       
Sbjct: 478 DEITKLSKLRILGLDSNELESLPEDLSGLVSLQELNVLSNRLTTFPRSVENLPKLKVIKA 537

Query: 368 SDNNISALPPELGLLEP-----------------------SLQALRLDGNPLRSIRRTIL 404
            +N+I  LPPELG +                         +L+ L L+  PLR I R ++
Sbjct: 538 GENDIQRLPPELGNMSALQELHLNDNLNLNSLPVELSLCKNLKILSLENCPLRDIERNVV 597

Query: 405 DRGTKAVLKYLKDKI 419
           + G+  ++ +L+  I
Sbjct: 598 EGGSAMIIYFLQQVI 612



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 50/98 (51%), Gaps = 5/98 (5%)

Query: 294 ILDLSY-NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
           +LDLS+  +  LP N  F  LP L ELYL   +L   P  I +L  LR L + QN L  +
Sbjct: 137 VLDLSHCELQQLP-NGIFDDLPGLTELYLYTNKLTSLPASIGQLAHLRRLSIQQNMLARL 195

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
           P+    LT L  LDL  N +    PE     PSL+ L+
Sbjct: 196 PKEMAKLTGLEVLDLRHNRLEGNLPE---CLPSLKQLK 230


>gi|299470923|emb|CBN79907.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
          Length = 744

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 205/512 (40%), Gaps = 149/512 (29%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           GN +  L    + +   L  L+ S N L+ +P ++GSL  L  L+L  N I S+P SI G
Sbjct: 169 GNAIRELPEEGLGAAVALKGLLLSGNRLSRLPSSVGSLHGLETLELSDNTIRSLPESIDG 228

Query: 68  CCSLAEFYMGNNALSALPAELG------------------------KLSKLGTLDLHSNQ 103
              LA   + NN L++LP  +G                        +L  L +LDL  N+
Sbjct: 229 LKRLATLTVSNNGLASLPESVGGLRSVKLLDFSRNGIETVPKNGLARLGALTSLDLRENK 288

Query: 104 LKEY-------------------------CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           L E                           +      L+ L + +N +  LP E+G +  
Sbjct: 289 LTEVPPLPEGGRLAQVFLGFNLLTSLDGAALLGVSAGLTELHVQSNRIGQLPEEVGSLAR 348

Query: 139 LR-----------------------KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP-- 173
           L+                       +L + GNPLRT+R SL++G   +L KYLR+R P  
Sbjct: 349 LKTLDVSNNDLGELPAALGYLPHLHRLAVDGNPLRTIRRSLLSGGASSLKKYLRTRGPCP 408

Query: 174 -------------ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-- 218
                            S      ED +   +R ++ +  L +EG  ++++P  +++   
Sbjct: 409 DYPGLEAADEDDDAAASSGGGGLSEDAVQAVSRSALETGTLDVEGRGMTSLPPGLFQDDR 468

Query: 219 --GEITKLDLSRNSIQEL--PPELSSCASL------QTLILSRNKIKDWPDAILTSLSSL 268
               +T+  LS N +Q    PP ++   SL      + L LS N + + P AI  +   L
Sbjct: 469 TLSAVTRAKLSGNKLQAFLAPPAIAPPGSLPLSISIRELDLSSNDLGEVPPAIF-ACRGL 527

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE 328
             L L  NPL  V    +  +  L+ LDLS N                    LR +    
Sbjct: 528 QTLVLAYNPLSDVSGLPWAALGSLETLDLSNN-------------------RLRCL---- 564

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
              D++ +  LR L+L  N                       +IS +P ELGL    L++
Sbjct: 565 --GDVVLMTWLRRLNLENN-----------------------DISPVPLELGLCT-GLES 598

Query: 389 LRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           L L GNP R I  ++L RGT A L YL+D++P
Sbjct: 599 LLLAGNPQRQISPSLLQRGTVATLAYLRDRLP 630



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 168/395 (42%), Gaps = 92/395 (23%)

Query: 33  NLLNGMPETIGS----LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 88
           NLL+G+    G        L RLDL  N+I  +P+++S    L    +  N LS++P EL
Sbjct: 97  NLLDGVDAADGEKFWEACELQRLDLSFNQITELPAAVSNLSVLVSLKLRKNRLSSVPPEL 156

Query: 89  GKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 146
             L  L  LDL  N ++E   E     + L  L LS N LS LP  +G +  L  L L+ 
Sbjct: 157 FSLESLSLLDLTGNAIRELPEEGLGAAVALKGLLLSGNRLSRLPSSVGSLHGLETLELSD 216

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
           N +R+                    LPE+ D         L  +AT        L++   
Sbjct: 217 NTIRS--------------------LPESIDG--------LKRLAT--------LTVSNN 240

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            L+++P  +     +  LD SRN I+ +P               +N         L  L 
Sbjct: 241 GLASLPESVGGLRSVKLLDFSRNGIETVP---------------KNG--------LARLG 277

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
           +L+ L L  N L +VP     +   L  + L +N + SL           L EL+++  +
Sbjct: 278 ALTSLDLRENKLTEVPP--LPEGGRLAQVFLGFNLLTSLDGAALLGVSAGLTELHVQSNR 335

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           + + P ++  L +L+ LD                       +S+N++  LP  LG L P 
Sbjct: 336 IGQLPEEVGSLARLKTLD-----------------------VSNNDLGELPAALGYL-PH 371

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           L  L +DGNPLR+IRR++L  G  ++ KYL+ + P
Sbjct: 372 LHRLAVDGNPLRTIRRSLLSGGASSLKKYLRTRGP 406



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 130/288 (45%), Gaps = 49/288 (17%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP---------------------- 62
           L  L  S N +  +P  + +LS L+ L L +NR+ S+P                      
Sbjct: 116 LQRLDLSFNQITELPAAVSNLSVLVSLKLRKNRLSSVPPELFSLESLSLLDLTGNAIREL 175

Query: 63  --SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSV 118
               +    +L    +  N LS LP+ +G L  L TL+L  N ++     ++  + RL+ 
Sbjct: 176 PEEGLGAAVALKGLLLSGNRLSRLPSSVGSLHGLETLELSDNTIRSLPESIDGLK-RLAT 234

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENED 177
           L +SNN L+ LP  +G + +++ L  + N + T+  + +     A L  L S  L EN+ 
Sbjct: 235 LTVSNNGLASLPESVGGLRSVKLLDFSRNGIETVPKNGL-----ARLGALTSLDLRENKL 289

Query: 178 SEASTTKEDLITMATRLSVTSKEL----SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
           +E     E       RL+          SL+G  L  +      AG +T+L +  N I +
Sbjct: 290 TEVPPLPE-----GGRLAQVFLGFNLLTSLDGAALLGV-----SAG-LTELHVQSNRIGQ 338

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
           LP E+ S A L+TL +S N + + P A L  L  L  L +D NPLR +
Sbjct: 339 LPEEVGSLARLKTLDVSNNDLGELP-AALGYLPHLHRLAVDGNPLRTI 385


>gi|345324055|ref|XP_001513272.2| PREDICTED: leucine-rich repeat protein SHOC-2 [Ornithorhynchus
           anatinus]
          Length = 537

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 177/380 (46%), Gaps = 62/380 (16%)

Query: 49  IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 108
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G                   
Sbjct: 103 MRLDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVG------------------- 143

Query: 109 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    +   L YL
Sbjct: 144 ---CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTL-YL 199

Query: 169 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
           R        +  +T ++D+  ++  +      LS+    +  +P+EI E   +  LD++ 
Sbjct: 200 RF-------NRMTTVEKDIKNLSKLIM-----LSIRENKIKQLPAEIGELCNLITLDVAH 247

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N ++ LP E+ +C  +  L L  N++ D P+ I  +LSSL+ L L  N L  +P    K 
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNELLDLPETI-GNLSSLNRLGLRYNRLSAIPRSLAKC 306

Query: 289 IPMLQILDLSYNIASLPE------------------NPPFSSLP-------HLQELYLRR 323
             + ++   + NI++LPE                  +   +SLP        + EL L  
Sbjct: 307 SALEELNLENNNISTLPEXXFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLAT 366

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            QL + P D+  L  L +L LS N L+ +P G  NL  L ELDL +N + +LP E+  L+
Sbjct: 367 NQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLK 426

Query: 384 PSLQALRLDGNPLRSIRRTI 403
             LQ L L  N L ++ R I
Sbjct: 427 -DLQKLVLTNNQLTTLPRGI 445



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 202/437 (46%), Gaps = 46/437 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRMTTVEKDIKNLSKLIMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N  +   L    +RL     S 
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLSSLNRLGLRYNRLSAIPRSL 303

Query: 180 A---------------STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
           A               ST  E    + +R  V SK L+++   L+++P +      + +L
Sbjct: 304 AKCSALEELNLENNNISTLPEXXFGIFSRAKVLSK-LNMKDNQLTSLPLDFGTWTSMVEL 362

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           +L+ N + ++P ++S   SL+ LILS N +K  P   L +L  L  L L+ N L  +P++
Sbjct: 363 NLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHG-LGNLRKLRELDLEENKLESLPNE 421

Query: 285 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
                                     + L  LQ+L L   QL   P  I  L  L  L L
Sbjct: 422 -------------------------IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGL 456

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            +N L  +PE    L +L EL L+DN N+ +LP EL L    L  + ++  PL  +   I
Sbjct: 457 GENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCS-KLSIMSIENCPLSHLPPQI 515

Query: 404 LDRGTKAVLKYLKDKIP 420
           +  G   ++++LK + P
Sbjct: 516 VAGGPSFIIQFLKMQGP 532



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRMTTVEK-DIKNLSKLI 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPE 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLNRLGLRYNRLSAIPRSL 303


>gi|395540076|ref|XP_003771986.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Sarcophilus harrisii]
          Length = 908

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 196/445 (44%), Gaps = 66/445 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP- 62
           LD+  N+ ++  N ++   T L +L  SKNL++ +P+ I  L  L  L L+ N++  +P 
Sbjct: 333 LDLNSNQFSIFPN-IVCYLTKLIKLSVSKNLISSLPKEIKQLKNLEELFLNHNKLTFLPV 391

Query: 63  ---------------------------------------------SSISGCCSLAEFYMG 77
                                                          I  C  L    + 
Sbjct: 392 QIFRLLKLKRLHLLDNKLESLSHNIENFKELKVLQLDKNLLKQLNKEIYSCAKLECLSLS 451

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           +NAL  +P  + +L  L  L ++ N++    V    ++ L VL+ S N++ G+P EI   
Sbjct: 452 DNALEIIPGNIHRLRNLRALYINRNKIMAINVNISHMKYLKVLEFSGNAIKGIPIEIKNC 511

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             +RK+ L+ N ++     L      + L+YL   L  N+ SE        I +    S 
Sbjct: 512 NQIRKMDLSFNKIQDFPVGLC---ALSFLEYL--NLNGNDLSE--------IPLDLSFSR 558

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
               L L   NLS     I     +  L+LS+N I ++PP +S+  SL+ LIL+ N  + 
Sbjct: 559 QLIHLELSQNNLSFFSDYICRLFNLDYLNLSKNKISQVPPSISNMTSLRVLILNGNNFEI 618

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP-ENPPFSSLP 314
           +P  + T L +L  L L  N ++ VPS+  +++  +Q LD S N   S P E    S+L 
Sbjct: 619 FPKELCT-LENLQILDLSENQIQYVPSE-IRNLQAIQNLDFSSNRFGSFPIELCHLSTLK 676

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
            LQ       +L + P ++  L QL ILD+S N+++ +P+    L +L     ++N I  
Sbjct: 677 ELQLCQKNGSKLTQVPDELSNLTQLEILDISHNTIKELPKNIGELKNLVTFKANNNLIGL 736

Query: 375 LPPELGLLEPSLQALRLDGNPLRSI 399
           LP     L   LQ L + GN L ++
Sbjct: 737 LPLSFESLN-KLQHLNMSGNRLTTL 760



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 196/457 (42%), Gaps = 88/457 (19%)

Query: 27  ELIASK-NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 85
           EL++ K N L  +P  I  LS L  L++  N I S+P+ IS    L + ++ NN     P
Sbjct: 239 ELLSMKENELIALPPEIKLLSNLCVLNVCHNHIASLPTEISQLVWLRQLFLDNNKFLEFP 298

Query: 86  AELGKLSKLGT-----------------------LDLHSNQLKEYCVEACQL-RLSVLDL 121
             LG L KL T                       LDL+SNQ   +    C L +L  L +
Sbjct: 299 TILGSLEKLETLSLSGNGLKRLPEMMANMKNLMVLDLNSNQFSIFPNIVCYLTKLIKLSV 358

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTG-----------------------NPLRTLRSSLVN 158
           S N +S LP EI ++  L +L L                         N L +L  ++ N
Sbjct: 359 SKNLISSLPKEIKQLKNLEELFLNHNKLTFLPVQIFRLLKLKRLHLLDNKLESLSHNIEN 418

Query: 159 GPTPALLKYLRSRLPENEDSEASTTKEDLITMA-----------TRLSVTSKELSLEGMN 207
                +L+  ++ L +      S  K + ++++            RL    + L +    
Sbjct: 419 FKELKVLQLDKNLLKQLNKEIYSCAKLECLSLSDNALEIIPGNIHRLR-NLRALYINRNK 477

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           + AI   I     +  L+ S N+I+ +P E+ +C  ++ + LS NKI+D+P   L +LS 
Sbjct: 478 IMAINVNISHMKYLKVLEFSGNAIKGIPIEIKNCNQIRKMDLSFNKIQDFPVG-LCALSF 536

Query: 268 LSCLKLDNNPLRQVPSD------------------GFKD----IPMLQILDLSYN-IASL 304
           L  L L+ N L ++P D                   F D    +  L  L+LS N I+ +
Sbjct: 537 LEYLNLNGNDLSEIPLDLSFSRQLIHLELSQNNLSFFSDYICRLFNLDYLNLSKNKISQV 596

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
           P  P  S++  L+ L L        P ++  L+ L+ILDLS+N +Q +P   +NL ++  
Sbjct: 597 P--PSISNMTSLRVLILNGNNFEIFPKELCTLENLQILDLSENQIQYVPSEIRNLQAIQN 654

Query: 365 LDLSDNNISALPPELGLLE--PSLQALRLDGNPLRSI 399
           LD S N   + P EL  L     LQ  + +G+ L  +
Sbjct: 655 LDFSSNRFGSFPIELCHLSTLKELQLCQKNGSKLTQV 691



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 174/368 (47%), Gaps = 20/368 (5%)

Query: 16  NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 75
           N  I S   L  L  S N L  +P  I  L  L  L +++N+I++I  +IS    L    
Sbjct: 436 NKEIYSCAKLECLSLSDNALEIIPGNIHRLRNLRALYINRNKIMAINVNISHMKYLKVLE 495

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 134
              NA+  +P E+   +++  +DL  N+++++ V  C L  L  L+L+ N LS +P ++ 
Sbjct: 496 FSGNAIKGIPIEIKNCNQIRKMDLSFNKIQDFPVGLCALSFLEYLNLNGNDLSEIPLDLS 555

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
               L  L L+ N L      +        L YL   L +N+ S+   +    I+  T L
Sbjct: 556 FSRQLIHLELSQNNLSFFSDYICRLFN---LDYLN--LSKNKISQVPPS----ISNMTSL 606

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
            V    L L G N    P E+     +  LDLS N IQ +P E+ +  ++Q L  S N+ 
Sbjct: 607 RV----LILNGNNFEIFPKELCTLENLQILDLSENQIQYVPSEIRNLQAIQNLDFSSNRF 662

Query: 255 KDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
             +P  +  L++L  L   + + + L QVP D   ++  L+ILD+S+N I  LP+N    
Sbjct: 663 GSFPIELCHLSTLKELQLCQKNGSKLTQVP-DELSNLTQLEILDISHNTIKELPKN--IG 719

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
            L +L         +   P     L +L+ L++S N L ++P    NL+SL E++  +N 
Sbjct: 720 ELKNLVTFKANNNLIGLLPLSFESLNKLQHLNMSGNRLTTLPNSLNNLSSLREINFDENP 779

Query: 372 ISALPPEL 379
           +   P E+
Sbjct: 780 LVKPPAEI 787



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 157/358 (43%), Gaps = 49/358 (13%)

Query: 81  LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 140
           L   P  L K   +  L L  N++K + VE     L +L +  N L  LPPEI  ++ L 
Sbjct: 203 LQKFPKGLFKTQDVKYLYLDKNKIKTFEVEPNMASLELLSMKENELIALPPEIKLLSNLC 262

Query: 141 KLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMAT------- 192
            L +  N + +L + +      + L +LR   L  N+  E  T    L  + T       
Sbjct: 263 VLNVCHNHIASLPTEI------SQLVWLRQLFLDNNKFLEFPTILGSLEKLETLSLSGNG 316

Query: 193 -----RLSVTSKELSLEGMN---LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 244
                 +    K L +  +N    S  P+ +    ++ KL +S+N I  LP E+    +L
Sbjct: 317 LKRLPEMMANMKNLMVLDLNSNQFSIFPNIVCYLTKLIKLSVSKNLISSLPKEIKQLKNL 376

Query: 245 QTLILSRNKIKDWP---------------DAILTSLSS-------LSCLKLDNNPLRQVP 282
           + L L+ NK+   P               D  L SLS        L  L+LD N L+Q+ 
Sbjct: 377 EELFLNHNKLTFLPVQIFRLLKLKRLHLLDNKLESLSHNIENFKELKVLQLDKNLLKQLN 436

Query: 283 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
            + +     L+ L LS N +  +P N     L +L+ LY+ R ++     +I  ++ L++
Sbjct: 437 KEIY-SCAKLECLSLSDNALEIIPGN--IHRLRNLRALYINRNKIMAINVNISHMKYLKV 493

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L+ S N+++ IP   KN   + ++DLS N I   P  L  L   L+ L L+GN L  I
Sbjct: 494 LEFSGNAIKGIPIEIKNCNQIRKMDLSFNKIQDFPVGLCAL-SFLEYLNLNGNDLSEI 550



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 1/106 (0%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           G+KLT + + L ++ T L  L  S N +  +P+ IG L  L+    + N I  +P S   
Sbjct: 685 GSKLTQVPDEL-SNLTQLEILDISHNTIKELPKNIGELKNLVTFKANNNLIGLLPLSFES 743

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 113
              L    M  N L+ LP  L  LS L  ++   N L +   E C+
Sbjct: 744 LNKLQHLNMSGNRLTTLPNSLNNLSSLREINFDENPLVKPPAEICK 789


>gi|341884210|gb|EGT40145.1| hypothetical protein CAEBREN_23247 [Caenorhabditis brenneri]
          Length = 559

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 216/466 (46%), Gaps = 71/466 (15%)

Query: 19  IASWTMLTELIASKNLLNGMPETIG-----------------------SLSRLIRLDLHQ 55
           I   T LTEL   KN L  +P  IG                       SL  L  LDL  
Sbjct: 92  IKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRH 151

Query: 56  NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE--------- 106
           N++  +P  I    SL   ++  N + A+  ++G L KL  LD+  N+++E         
Sbjct: 152 NKLTEVPPVIYKITSLETLWLRYNRIVAVDEQIGNLVKLKMLDVRENKIRELPSAIGKLT 211

Query: 107 ---YC-------------VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
               C             +  CQ  L+ LDL +N LS LP  IGK+T+L ++ +  N +R
Sbjct: 212 SLVVCLVSYNHLTRVPEEIGECQ-SLTQLDLQHNDLSELPYSIGKLTSLVRIGIRYNKIR 270

Query: 151 TLRSSLVNGPTPALLKYLRSR-----LPEN------EDSEASTTKEDLITM---ATRLSV 196
            + S L N     L +++        LP N      +    + ++ +L        +  V
Sbjct: 271 CIPSELEN--CQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFV 328

Query: 197 TSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
           ++  +++E   +S IP  I+ +A  +TKL+L  N +  LP ++ S  S+  L LS N++K
Sbjct: 329 STVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLK 388

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 315
             P+ I   L +L  L L NN L+++P+       + ++      + ++P    F  L H
Sbjct: 389 VLPEDI-EKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEENELETVPTEIGF--LQH 445

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISA 374
           L +L+++  ++   P  I  L  L+ L L +N+L +IPE   +L SL  L L+DN ++  
Sbjct: 446 LTKLWVQSNKIVSLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHN 505

Query: 375 LPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           LP EL L + SL+ + ++ +PL  I   I   G   V++YLK + P
Sbjct: 506 LPFELALCQ-SLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGP 550



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 111/202 (54%), Gaps = 6/202 (2%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           + L L  + +++IPS I E  ++T+L L +N +  LP E+    +L+ L LS N +   P
Sbjct: 76  QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 135

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
           D+ L SL SL  L L +N L +VP   +K I  L+ L L YN I ++ E     +L  L+
Sbjct: 136 DS-LASLESLETLDLRHNKLTEVPPVIYK-ITSLETLWLRYNRIVAVDEQ--IGNLVKLK 191

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++RE P+ I +L  L +  +S N L  +PE      SLT+LDL  N++S LP 
Sbjct: 192 MLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECQSLTQLDLQHNDLSELPY 251

Query: 378 ELGLLEPSLQALRLDGNPLRSI 399
            +G L  SL  + +  N +R I
Sbjct: 252 SIGKLT-SLVRIGIRYNKIRCI 272



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 30/181 (16%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E N+++ +   + +  T LT+L   +N L  +P  +GS + +  L+L  N++  +P 
Sbjct: 333 INMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPE 392

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSK-----------------------LGTLDLH 100
            I    +L    + NN L  LP ++G L K                       L  L + 
Sbjct: 393 DIEKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEENELETVPTEIGFLQHLTKLWVQ 452

Query: 101 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 159
           SN++         L  L  L L  N+L+ +P EIG + +L+ L L  N      SSL N 
Sbjct: 453 SNKIVSLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDN------SSLHNL 506

Query: 160 P 160
           P
Sbjct: 507 P 507


>gi|429961331|gb|ELA40876.1| hypothetical protein VICG_02090, partial [Vittaforma corneae ATCC
           50505]
          Length = 728

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 173/369 (46%), Gaps = 42/369 (11%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N+L +L +  I     L EL  S N L  +P  +  L  L +LDL +NR    P+ +   
Sbjct: 102 NRLKLLPDE-IGKLVSLQELCLSCNELKLLPAKMVELKSLQKLDLWKNRFEKFPNVVGEL 160

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 127
            SL E  +  N L +LPA +G L  L  LDLH N LK    E  +L+ L  L+L NN   
Sbjct: 161 KSLQELDLSGNKLESLPAVIGNLINLQDLDLHENSLKTLPTEIEKLKSLQKLNLQNNRFE 220

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            LP  IG +T L++L L  N L+TL  ++       +L ++ +              E L
Sbjct: 221 SLPAVIGNLTNLQELDLDHNKLKTLPDTIGELKDLRILSFIHNEF------------ESL 268

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
            T    L    +EL+ +   L  +P EI E   + KL LS N+++ LP  +     L+ L
Sbjct: 269 PTKVIELR-NLRELNFDDNKLKLLPVEIGELKNLQKLYLSGNNLKTLPDTIGGLKDLREL 327

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 307
            LS N+++  P A++ +L +L  L LD+N L+ +P                         
Sbjct: 328 SLSGNELESLP-AVIGNLVNLQYLNLDHNKLKTLPD------------------------ 362

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT-SLTELD 366
                L +L++LYL   +L   P  I  L+ L+ L LS N L+++P   + L+ SL  L+
Sbjct: 363 -TIGELKNLRKLYLGGSKLEILPVAIGELENLQKLHLSGNKLETLPIEIEKLSGSLRLLN 421

Query: 367 LSDNNISAL 375
           L  NNIS +
Sbjct: 422 LRGNNISEV 430



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 185/407 (45%), Gaps = 68/407 (16%)

Query: 20  ASWTMLTELIAS-KNLLNGM-PETIGSLSRLIR----LDLHQNRILSIPSSISGCCS--L 71
           A W++L  + A+ ++  NG  P+ IGS  R  R    + +H   I  I S I G     +
Sbjct: 12  AIWSLLVLMGATLQSSDNGANPDGIGSFERHSRNERKISIHSKDIEYIDSYIRGSVKSEI 71

Query: 72  AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPP 131
            E  + NN L  LP  + +L  L  L L+ N+LK                       LP 
Sbjct: 72  KELVLSNNNLETLPPVMEELENLKVLFLNVNRLKL----------------------LPD 109

Query: 132 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 191
           EIGK+ +L++L L+ N L+ L + +V   +   L   ++R             E    + 
Sbjct: 110 EIGKLVSLQELCLSCNELKLLPAKMVELKSLQKLDLWKNRF------------EKFPNVV 157

Query: 192 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 251
             L  + +EL L G  L ++P+ I     +  LDL  NS++ LP E+    SLQ L L  
Sbjct: 158 GELK-SLQELDLSGNKLESLPAVIGNLINLQDLDLHENSLKTLPTEIEKLKSLQKLNLQN 216

Query: 252 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP-- 308
           N+ +  P A++ +L++L  L LD+N L+ +P D   ++  L+IL   +N   SLP     
Sbjct: 217 NRFESLP-AVIGNLTNLQELDLDHNKLKTLP-DTIGELKDLRILSFIHNEFESLPTKVIE 274

Query: 309 -------------------PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
                                  L +LQ+LYL    L+  P  I  L+ LR L LS N L
Sbjct: 275 LRNLRELNFDDNKLKLLPVEIGELKNLQKLYLSGNNLKTLPDTIGGLKDLRELSLSGNEL 334

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           +S+P    NL +L  L+L  N +  LP  +G L+ +L+ L L G+ L
Sbjct: 335 ESLPAVIGNLVNLQYLNLDHNKLKTLPDTIGELK-NLRKLYLGGSKL 380



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 149/311 (47%), Gaps = 45/311 (14%)

Query: 97  LDLHSNQLK---EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
           + +HS  ++    Y   + +  +  L LSNN+L  LPP + ++  L+ L L  N L+ L 
Sbjct: 49  ISIHSKDIEYIDSYIRGSVKSEIKELVLSNNNLETLPPVMEELENLKVLFLNVNRLKLL- 107

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
                   P  +  L                           V+ +EL L    L  +P+
Sbjct: 108 --------PDEIGKL---------------------------VSLQELCLSCNELKLLPA 132

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           ++ E   + KLDL +N  ++ P  +    SLQ L LS NK++  P A++ +L +L  L L
Sbjct: 133 KMVELKSLQKLDLWKNRFEKFPNVVGELKSLQELDLSGNKLESLP-AVIGNLINLQDLDL 191

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
             N L+ +P++  + +  LQ L+L  N   SLP      +L +LQEL L   +L+  P  
Sbjct: 192 HENSLKTLPTE-IEKLKSLQKLNLQNNRFESLP--AVIGNLTNLQELDLDHNKLKTLPDT 248

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
           I  L+ LRIL    N  +S+P     L +L EL+  DN +  LP E+G L+ +LQ L L 
Sbjct: 249 IGELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDNKLKLLPVEIGELK-NLQKLYLS 307

Query: 393 GNPLRSIRRTI 403
           GN L+++  TI
Sbjct: 308 GNNLKTLPDTI 318



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 147/315 (46%), Gaps = 43/315 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+  N+     N ++     L EL  S N L  +P  IG+L  L  LDLH+N + +
Sbjct: 140 LQKLDLWKNRFEKFPN-VVGELKSLQELDLSGNKLESLPAVIGNLINLQDLDLHENSLKT 198

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK--------------- 105
           +P+ I    SL +  + NN   +LPA +G L+ L  LDL  N+LK               
Sbjct: 199 LPTEIEKLKSLQKLNLQNNRFESLPAVIGNLTNLQELDLDHNKLKTLPDTIGELKDLRIL 258

Query: 106 -----EYC---VEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
                E+     +  +LR L  L+  +N L  LP EIG++  L+KL L+GN L+TL  ++
Sbjct: 259 SFIHNEFESLPTKVIELRNLRELNFDDNKLKLLPVEIGELKNLQKLYLSGNNLKTLPDTI 318

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKELSLEGMNLSAIPSE 214
                   LK LR         E S +  +L ++   +   V  + L+L+   L  +P  
Sbjct: 319 ------GGLKDLR---------ELSLSGNELESLPAVIGNLVNLQYLNLDHNKLKTLPDT 363

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           I E   + KL L  + ++ LP  +    +LQ L LS NK++  P  I     SL  L L 
Sbjct: 364 IGELKNLRKLYLGGSKLEILPVAIGELENLQKLHLSGNKLETLPIEIEKLSGSLRLLNLR 423

Query: 275 NNPLRQVPSDGFKDI 289
            N + +V  DG + +
Sbjct: 424 GNNISEV-GDGERTV 437



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 131/259 (50%), Gaps = 11/259 (4%)

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE-DLITMATRLSVTS--KELSLEGMN 207
           TL+SS  NG  P  +     R   NE   +  +K+ + I    R SV S  KEL L   N
Sbjct: 23  TLQSS-DNGANPDGIGSF-ERHSRNERKISIHSKDIEYIDSYIRGSVKSEIKELVLSNNN 80

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L  +P  + E   +  L L+ N ++ LP E+    SLQ L LS N++K  P A +  L S
Sbjct: 81  LETLPPVMEELENLKVLFLNVNRLKLLPDEIGKLVSLQELCLSCNELKLLP-AKMVELKS 139

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L L  N   + P +   ++  LQ LDLS N + SLP      +L +LQ+L L    L
Sbjct: 140 LQKLDLWKNRFEKFP-NVVGELKSLQELDLSGNKLESLP--AVIGNLINLQDLDLHENSL 196

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
           +  PT+I +L+ L+ L+L  N  +S+P    NLT+L ELDL  N +  LP  +G L+  L
Sbjct: 197 KTLPTEIEKLKSLQKLNLQNNRFESLPAVIGNLTNLQELDLDHNKLKTLPDTIGELK-DL 255

Query: 387 QALRLDGNPLRSIRRTILD 405
           + L    N   S+   +++
Sbjct: 256 RILSFIHNEFESLPTKVIE 274


>gi|255071329|ref|XP_002507746.1| predicted protein [Micromonas sp. RCC299]
 gi|226523021|gb|ACO69004.1| predicted protein [Micromonas sp. RCC299]
          Length = 348

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/325 (33%), Positives = 153/325 (47%), Gaps = 65/325 (20%)

Query: 77  GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGK 135
           G   + ALPAE+G+L+ L TL+L SN+L+    E  QL  L  L+LS+N L+ +P EIG 
Sbjct: 71  GFGLIGALPAEIGRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAEIGL 130

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           +T+LR+L L  N L ++         PA +  L S                         
Sbjct: 131 LTSLRQLHLICNQLTSV---------PAEIGQLTSL------------------------ 157

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              KELSL G  L ++P+EIW+   +  L+L  N +  +P E+    SL+ L L  N   
Sbjct: 158 ---KELSLAGTELRSLPAEIWQLTSLEVLELQNNHLTSVPAEIGQLTSLRELHLGGN--- 211

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
            W                    L  VP++    +  LQ+LDLS N + S P       L 
Sbjct: 212 -W-------------------RLTSVPAE-IGQLTSLQVLDLSRNQLTSAPAE--IGQLA 248

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
            L EL+L   Q    P +I +L  LR L L  N L S+P     LTSL EL L DN +++
Sbjct: 249 SLTELFLHDNQFTSVPAEIGQLTSLRELRLGGNQLTSVPSEIGQLTSLKELWLFDNRLTS 308

Query: 375 LPPELGLLEPSLQALRLDGNPLRSI 399
           +P E+G L  SL+ L L  N L S+
Sbjct: 309 VPAEMGQL-TSLKKLYLRDNLLTSV 332



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 143/286 (50%), Gaps = 22/286 (7%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +L++EG  L       I     L+ L  + N L  +P  IG L+ L RL+L  N++ S+P
Sbjct: 66  ELELEGFGLIGALPAEIGRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVP 125

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
           + I    SL + ++  N L+++PAE+G+L+ L  L L   +L+    E  QL  L VL+L
Sbjct: 126 AEIGLLTSLRQLHLICNQLTSVPAEIGQLTSLKELSLAGTELRSLPAEIWQLTSLEVLEL 185

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPENED 177
            NN L+ +P EIG++T+LR+L L GN   T          PA +  L S     L  N+ 
Sbjct: 186 QNNHLTSVPAEIGQLTSLRELHLGGNWRLT--------SVPAEIGQLTSLQVLDLSRNQL 237

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
           + A      L ++         EL L     +++P+EI +   + +L L  N +  +P E
Sbjct: 238 TSAPAEIGQLASLT--------ELFLHDNQFTSVPAEIGQLTSLRELRLGGNQLTSVPSE 289

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           +    SL+ L L  N++   P A +  L+SL  L L +N L  VP+
Sbjct: 290 IGQLTSLKELWLFDNRLTSVP-AEMGQLTSLKKLYLRDNLLTSVPT 334



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 31/152 (20%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   T L  L  S+N L   P  IG L+ L  L LH N+  S+P+ I    SL E  +G 
Sbjct: 221 IGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHDNQFTSVPAEIGQLTSLRELRLGG 280

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N L+++P+E+G+L+           LKE            L L +N L+ +P E+G++T+
Sbjct: 281 NQLTSVPSEIGQLTS----------LKE------------LWLFDNRLTSVPAEMGQLTS 318

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 170
           L+KL L  N L ++         P +++ LR+
Sbjct: 319 LKKLYLRDNLLTSV---------PTVVRELRA 341


>gi|109044385|ref|XP_001085657.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like [Macaca mulatta]
          Length = 560

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 178/416 (42%), Gaps = 62/416 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN L  L    I + T L E+   +N     P+ +  L  L  +DL +N+I +IP 
Sbjct: 147 LGLTGNHLKCLPKE-IVNQTKLREIYLKRNQFEAFPQELCVLYNLEIIDLDENKIGAIPE 205

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L +FY+ +N L  LPA L   S+L  LDL  N L        +LR ++ + LS
Sbjct: 206 EIGHLTGLQKFYVASNNLPVLPASLCHCSQLSVLDLSHNLLHSIPKSLTELRKMTEIGLS 265

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L  +P  I + T+L  L L    L  LR S                           
Sbjct: 266 GNRLEKVPYLICRWTSLHLLYLGNTGLHRLRGSF-------------------------- 299

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                     R  V  + L L   +L   P +I     +  L L  N I +LP EL S +
Sbjct: 300 ----------RRLVNLRCLDLSQNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLS 349

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
            L+ L L+ N+   +P+ +L SL+SL  L +  +        GFK         L+Y   
Sbjct: 350 KLKILGLTGNEFLSFPEEVL-SLASLEKLYIGQD-------QGFK---------LTY--- 389

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
            +PE+     L  L+ELY+    L   P  +  +  L +LD   N L+ +P+      +L
Sbjct: 390 -VPEH--IRKLQSLKELYIENNHLEYLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQAL 446

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
            EL L DN ++ LP  L  L  +L+ L L  NP+    + +   G + + KYLK+K
Sbjct: 447 KELLLEDNLLTHLPENLDSL-VNLKVLTLMDNPMEEPPKEVCAEGNEVIWKYLKEK 501



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 156/378 (41%), Gaps = 43/378 (11%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
           AS   L  +P  I + + L  + L  N+I  IP  I    ++   Y+  N L +L   LG
Sbjct: 32  ASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPALG 91

Query: 90  KLSKLGTLDLHSNQL--KEYCVEACQLRLSVLDLSNNSLSGLPPEIGK-MTTLRKLLLTG 146
            LS L  LDL  N +      V +    L  L L    L  +P  I K +  L  L LTG
Sbjct: 92  LLSSLERLDLSYNPIFSSSLLVVSFLHALRELRLYQTDLKEIPVVICKNLHHLELLGLTG 151

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
           N L+ L   +VN         LR    +    EA   +   + +   L +    + L+  
Sbjct: 152 NHLKCLPKEIVNQTK------LREIYLKRNQFEAFPQE---LCVLYNLEI----IDLDEN 198

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            + AIP EI     + K  ++ N++  LP  L  C+ L  L LS N +   P + LT L 
Sbjct: 199 KIGAIPEEIGHLTGLQKFYVASNNLPVLPASLCHCSQLSVLDLSHNLLHSIPKS-LTELR 257

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
            ++ + L  N L +VP                Y I        ++SL HL  LYL    L
Sbjct: 258 KMTEIGLSGNRLEKVP----------------YLICR------WTSL-HL--LYLGNTGL 292

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
                   RL  LR LDLSQN L   P     L +L  L L DN I  LP ELG L   L
Sbjct: 293 HRLRGSFRRLVNLRCLDLSQNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLS-KL 351

Query: 387 QALRLDGNPLRSIRRTIL 404
           + L L GN   S    +L
Sbjct: 352 KILGLTGNEFLSFPEEVL 369


>gi|428173352|gb|EKX42255.1| hypothetical protein GUITHDRAFT_74163 [Guillardia theta CCMP2712]
          Length = 643

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 191/409 (46%), Gaps = 40/409 (9%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL----------- 71
           T L  L   KN L  +P +IG+L+ L  + L +N++  IPS I  C SL           
Sbjct: 37  TALQSLKLGKNRLIALPPSIGNLTNLQVISLEENKLKEIPSQIENCGSLRTIDVSHNNLR 96

Query: 72  --------------AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 116
                          E  + +N + ++P  +  L+ L  LD+ SN L  +      + +L
Sbjct: 97  RLPIPRKISRLKLLKELRVAHNQIDSIPYTMSLLNNLKILDVSSNHLTSFDTVLTDIPQL 156

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 176
            VL+ + N+ + LP EI KMT LR+L + GN +R++       P  A L  L +      
Sbjct: 157 VVLNFAKNAATELPVEIAKMTNLRELSVQGNQIRSI-------PDIAALFQLTNLEVLYL 209

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
                T     I+  T L    +EL     +L   P +I E   + ++D S NS++ +PP
Sbjct: 210 RYNQVTFLPGSISKFTNL----RELDCAYNSLVDTPPDIRELKRLKRIDFSHNSLRGIPP 265

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           ++ +   ++ L LS N++++ P  +   ++SL  L   NN +  +P +       L +L 
Sbjct: 266 DIGTLEEVEYLDLSYNQLQELPREV-GFMTSLQSLDFSNNQIVFLPVELEALETSLTLLS 324

Query: 297 LSYNIASLPENP-PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
              N  + P  P    +L +L+   L    L   P+ I RL+ L   +++ N L +IP  
Sbjct: 325 ADNNAITDPTLPVELGNLRNLERFDLSSNLLSRLPSSIKRLESLVYFNVNSNRLTTIPPE 384

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
            K L SL EL L DN + ++PPE+G L  SL  L LDGN   SI  T++
Sbjct: 385 VKGLKSLIELHLKDNLLISMPPEIGSLS-SLTTLSLDGNQFMSIPTTMI 432



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 171/368 (46%), Gaps = 46/368 (12%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L   P  I  +  L  +   +N I  +P+ +    +L    +G N L ALP  +G L+ L
Sbjct: 3   LTVFPGLICDIFILSNISATKNEIKELPAEVGLLTALQSLKLGKNRLIALPPSIGNLTNL 62

Query: 95  GTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLP--PEIGKMTTLRKLLLTGNPLR 150
             + L  N+LKE    +E C   L  +D+S+N+L  LP   +I ++  L++L +  N + 
Sbjct: 63  QVISLEENKLKEIPSQIENCG-SLRTIDVSHNNLRRLPIPRKISRLKLLKELRVAHNQID 121

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
           ++  ++      +LL  L+                        L V+S  L+     L+ 
Sbjct: 122 SIPYTM------SLLNNLKI-----------------------LDVSSNHLTSFDTVLTD 152

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD-AILTSLSSLS 269
           IP       ++  L+ ++N+  ELP E++   +L+ L +  N+I+  PD A L  L++L 
Sbjct: 153 IP-------QLVVLNFAKNAATELPVEIAKMTNLRELSVQGNQIRSIPDIAALFQLTNLE 205

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLPHLQELYLRRMQLRE 328
            L L  N +  +P         L+ LD +YN  SL + PP    L  L+ +      LR 
Sbjct: 206 VLYLRYNQVTFLPG-SISKFTNLRELDCAYN--SLVDTPPDIRELKRLKRIDFSHNSLRG 262

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
            P DI  L+++  LDLS N LQ +P     +TSL  LD S+N I  LP EL  LE SL  
Sbjct: 263 IPPDIGTLEEVEYLDLSYNQLQELPREVGFMTSLQSLDFSNNQIVFLPVELEALETSLTL 322

Query: 389 LRLDGNPL 396
           L  D N +
Sbjct: 323 LSADNNAI 330



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 182/417 (43%), Gaps = 46/417 (11%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N++T L  + I+ +T L EL  + N L   P  I  L RL R+D   N +  IP  I   
Sbjct: 212 NQVTFLPGS-ISKFTNLRELDCAYNSLVDTPPDIRELKRLKRIDFSHNSLRGIPPDIGTL 270

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSL 126
             +    +  N L  LP E+G ++ L +LD  +NQ+    VE  A +  L++L   NN++
Sbjct: 271 EEVEYLDLSYNQLQELPREVGFMTSLQSLDFSNNQIVFLPVELEALETSLTLLSADNNAI 330

Query: 127 SG--LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 184
           +   LP E+G +  L +  L+ N L  L         P+ +K L S +  N +S   TT 
Sbjct: 331 TDPTLPVELGNLRNLERFDLSSNLLSRL---------PSSIKRLESLVYFNVNSNRLTT- 380

Query: 185 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 244
                                     IP E+     + +L L  N +  +PPE+ S +SL
Sbjct: 381 --------------------------IPPEVKGLKSLIELHLKDNLLISMPPEIGSLSSL 414

Query: 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL-SYNIAS 303
            TL L  N+    P  ++  L +L  L+  +N LR V S     +  L +L L + N+  
Sbjct: 415 TTLSLDGNQFMSIPTTMIFQLFTLEKLEAGDNRLRSV-SPSISQLSCLTLLSLKNNNLRV 473

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
           LP          L+ L L    +   P  +  L +LR L L +N L  +P+    L +L 
Sbjct: 474 LPRE--LGRCTGLKTLSLNANDIIAIPDQLCGLARLRRLTLDKNGLCFLPDTIGCLVNLR 531

Query: 364 ELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            L   DN I  LPP    L  SL+ L +  N   +I +++LD      L+   + IP
Sbjct: 532 SLRFRDNLIMRLPPSFSSLT-SLRELDMSKNKFTNIPQSLLDLTGLTRLRCGHNPIP 587



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 138/324 (42%), Gaps = 37/324 (11%)

Query: 81  LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 139
           L+  P  +  +  L  +    N++KE   E   L  L  L L  N L  LPP IG +T L
Sbjct: 3   LTVFPGLICDIFILSNISATKNEIKELPAEVGLLTALQSLKLGKNRLIALPPSIGNLTNL 62

Query: 140 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 199
           + + L  N L+ + S + N                                    S+ + 
Sbjct: 63  QVISLEENKLKEIPSQIENCG----------------------------------SLRTI 88

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           ++S   +    IP +I     + +L ++ N I  +P  +S   +L+ L +S N +  + D
Sbjct: 89  DVSHNNLRRLPIPRKISRLKLLKELRVAHNQIDSIPYTMSLLNNLKILDVSSNHLTSF-D 147

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 319
            +LT +  L  L    N   ++P +  K   + ++      I S+P+      L +L+ L
Sbjct: 148 TVLTDIPQLVVLNFAKNAATELPVEIAKMTNLRELSVQGNQIRSIPDIAALFQLTNLEVL 207

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
           YLR  Q+   P  I +   LR LD + NSL   P   + L  L  +D S N++  +PP++
Sbjct: 208 YLRYNQVTFLPGSISKFTNLRELDCAYNSLVDTPPDIRELKRLKRIDFSHNSLRGIPPDI 267

Query: 380 GLLEPSLQALRLDGNPLRSIRRTI 403
           G LE  ++ L L  N L+ + R +
Sbjct: 268 GTLE-EVEYLDLSYNQLQELPREV 290


>gi|296227601|ref|XP_002759487.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Callithrix jacchus]
          Length = 560

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 180/420 (42%), Gaps = 62/420 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN L  L    I + T L E+   +N L   P+ +  L  L  +DL +N+I +IP 
Sbjct: 147 LGLTGNHLKCLPKE-IVNQTKLREIYLKRNQLEVFPQELCVLYNLEIIDLDENKIGAIPE 205

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L +F++ +N L  LP  L + S+L  LDL  N L        +LR ++ + LS
Sbjct: 206 EIGHLTQLQKFFLASNNLPVLPVSLCQCSQLSVLDLSHNLLHSIPNSLAELREMTEIGLS 265

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L  +P  I + T+L  L L    LR LR S                           
Sbjct: 266 GNRLEKVPHLICRWTSLHLLYLRNTGLRRLRGSF-------------------------- 299

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                     R  V  + L L   +L   P +I     +  L L  N I +LP EL+S +
Sbjct: 300 ----------RRLVNLRCLDLSQNHLDHCPPQICVLKNLEVLALDDNKIGQLPSELNSLS 349

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
            L+ L L+ N+   +P+ +L SL SL  L +                      D    + 
Sbjct: 350 KLKILGLTGNEFLSFPEEVL-SLESLEKLYIGQ--------------------DQGSKLT 388

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
            +PE+     L  L+ELY+   +L   P  +  +  L +LD   NSL+ +P+      +L
Sbjct: 389 YVPEH--IGKLQSLKELYIENNRLEYLPMSLGSIPNLEVLDCRHNSLKQLPDAICQAQAL 446

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
            EL L DN ++ LP  L  L  +++ L L  NP++   + +   G +A+ KYLK+K   N
Sbjct: 447 KELLLEDNLLTHLPENLDSL-VNIKVLTLMDNPMKEPPKEVCAEGNEAIWKYLKEKRKRN 505



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 165/357 (46%), Gaps = 41/357 (11%)

Query: 74  FYM--GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLP 130
           F++   N +L+A+P E+   +++  + L +NQ++E   E  C  ++ VL L  N+L  L 
Sbjct: 28  FFIDASNQSLTAIPLEIFTFTEVEEVHLENNQIEEIPQEIQCLKKIRVLYLDKNNLRSLC 87

Query: 131 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLIT 189
           P +G +++L  L L+ NP+    SSL+     + L+ LR  RL + +       KE  +T
Sbjct: 88  PALGLLSSLESLDLSYNPI--FSSSLL---VVSFLRALRELRLYQTD------LKEIPVT 136

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
           +   L    + L L G +L  +P EI    ++ ++ L RN ++  P EL    +L+ + L
Sbjct: 137 ICKNLH-HLELLGLTGNHLKCLPKEIVNQTKLREIYLKRNQLEVFPQELCVLYNLEIIDL 195

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENP 308
             NKI   P+ I   L+ L    L +N L  +P         L +LDLS+N+  S+P + 
Sbjct: 196 DENKIGAIPEEI-GHLTQLQKFFLASNNLPVLPV-SLCQCSQLSVLDLSHNLLHSIPNSL 253

Query: 309 P--------------FSSLPHL-------QELYLRRMQLREAPTDILRLQQLRILDLSQN 347
                             +PHL         LYLR   LR       RL  LR LDLSQN
Sbjct: 254 AELREMTEIGLSGNRLEKVPHLICRWTSLHLLYLRNTGLRRLRGSFRRLVNLRCLDLSQN 313

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
            L   P     L +L  L L DN I  LP EL  L   L+ L L GN   S    +L
Sbjct: 314 HLDHCPPQICVLKNLEVLALDDNKIGQLPSELNSLS-KLKILGLTGNEFLSFPEEVL 369


>gi|28317202|gb|AAO39608.1| GH22674p, partial [Drosophila melanogaster]
          Length = 647

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 191/420 (45%), Gaps = 61/420 (14%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP-AELGK 90
            N L  +PE +G L +L  L L  N IL +P    G  +L E +  NN +  +P A    
Sbjct: 257 HNDLTSLPEDMGLLRKLDCLYLQHNDILELPE-FEGNEALNELHASNNFIKIIPKAMCSN 315

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL  N++ E   E C LR     D+SNN++S LP  +  +  L  L + GNP+
Sbjct: 316 LPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPI 375

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT------------ 197
           +T+R  ++   T  +LK L  R       E      D  + +  +SVT            
Sbjct: 376 KTIRRDILQCGTTRILKTLHDRAVAKAKEEGGGV--DDASTSAGISVTRLRGGQMDDGDI 433

Query: 198 ------------SKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCA 242
                       ++ L++    L+++P ++++      +  +D +RN +  LP  L    
Sbjct: 434 PGNFPDRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMK 493

Query: 243 SLQT-LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
            L T L+LS N I   P  I +  + +S L L NN L  +P++                 
Sbjct: 494 DLVTELVLSNNVIGYVPQFI-SQFTRISFLNLSNNLLNDLPTE----------------- 535

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLT 360
                   F  L  L+EL +   +    P  +  LQ L IL  S+N ++ +   G +N+ 
Sbjct: 536 --------FGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHIKMLNVSGLQNMR 587

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            L+ LDL +N+I  +PP LG L  ++  L L GNP R  R  IL +GT A++ YL+D+IP
Sbjct: 588 RLSTLDLRNNDIETVPPILGNLT-NITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRIP 646



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 157/326 (48%), Gaps = 41/326 (12%)

Query: 94  LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L  LDL SN L     +   L+ L+VL L +N+L  LPPEIGK+  L +L ++ N L  L
Sbjct: 112 LNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQL 171

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
             ++ + P    L++L   +  NE  E +    DL  +        + L     N+ ++P
Sbjct: 172 PRAMYSLPE---LRHLN--ISYNEFVELNPDISDLHML--------EFLDGGHNNIQSLP 218

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
             I     +T L L  N I+ELPP+L +  SLQ + L  N +   P+  +  L  L CL 
Sbjct: 219 GGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPED-MGLLRKLDCLY 277

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
           L +N + ++P   F+    L  L  S N   +      S+LPHL+               
Sbjct: 278 LQHNDILELPE--FEGNEALNELHASNNFIKIIPKAMCSNLPHLK--------------- 320

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
                   ILDL  N +  +P+    L +L  LD+S+N IS LP  L  L   L +L+++
Sbjct: 321 --------ILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLA-HLISLQVE 371

Query: 393 GNPLRSIRRTILDRGTKAVLKYLKDK 418
           GNP+++IRR IL  GT  +LK L D+
Sbjct: 372 GNPIKTIRRDILQCGTTRILKTLHDR 397



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 2/172 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D   N+L+ L N L     ++TEL+ S N++  +P+ I   +R+  L+L  N +  +P+
Sbjct: 475 VDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPT 534

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDL 121
                 +L E  + NN    +P  + +L  L  L    N +K   V   Q   RLS LDL
Sbjct: 535 EFGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDL 594

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            NN +  +PP +G +T +  L L GNP R  R  ++   T A++ YLR R+P
Sbjct: 595 RNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRIP 646



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 182/420 (43%), Gaps = 65/420 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N LT +S   I +   LT L    N L  +P  IG L +L+RL++  N++  
Sbjct: 112 LNNLDLSSNTLTHISPK-IENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQ 170

Query: 61  IPSSISGC-------CSLAEF----------YM------GNNALSALPAELGKLSKLGTL 97
           +P ++           S  EF          +M      G+N + +LP  +G L +L  L
Sbjct: 171 LPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTAL 230

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            L  N +KE   +   +R L  +DL +N L+ LP ++G +  L  L L  N +       
Sbjct: 231 LLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLYLQHNDIL------ 284

Query: 157 VNGPTPALLKYLRSRLPENEDSEAST---TKEDLITMATRLSVTS----KELSLEGMNLS 209
                          LPE E +EA        + I +  +   ++    K L L    ++
Sbjct: 285 --------------ELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKIT 330

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P E+     + +LD+S N+I  LP  LSS A L +L +  N IK     IL   ++  
Sbjct: 331 ELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRI 390

Query: 270 CLKLDNNPLRQVPSDGF--------KDIPMLQILDLSYNIASLPEN-PPFSSLPHLQELY 320
              L +  + +   +G           I + ++     +   +P N P    L H + L 
Sbjct: 391 LKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTLA 450

Query: 321 LRRMQLREAPTDILRL---QQLRILDLSQNSLQSIPEGFKNLTSL-TELDLSDNNISALP 376
           +   +L   P  + ++   + + ++D ++N L ++P G +++  L TEL LS+N I  +P
Sbjct: 451 VNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVP 510



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 98/225 (43%), Gaps = 31/225 (13%)

Query: 178 SEASTTKEDL---ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
           SE  T  EDL   +         SK ++LE + +       W    +  LDLS N++  +
Sbjct: 67  SEPPTRAEDLPKRLYDINEADADSKAVNLEQLTIKE-EDAWWNQVPLNNLDLSSNTLTHI 125

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
            P++ +  SL  L L  N + + P  I   L  L  L + +N L Q+P   +  +P L+ 
Sbjct: 126 SPKIENLQSLTVLTLHDNALVELPPEI-GKLEKLVRLNVSHNKLSQLPRAMYS-LPELRH 183

Query: 295 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           L++SYN                        +  E   DI  L  L  LD   N++QS+P 
Sbjct: 184 LNISYN------------------------EFVELNPDISDLHMLEFLDGGHNNIQSLPG 219

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           G   L  LT L L  N+I  LPP+L  +  SLQ + L  N L S+
Sbjct: 220 GIGFLVRLTALLLPYNHIKELPPDLVNMR-SLQKIDLMHNDLTSL 263


>gi|21358045|ref|NP_650306.1| flyers-cup, isoform B [Drosophila melanogaster]
 gi|5911290|gb|AAD55737.1|AF184226_1 BcDNA.GH09045 [Drosophila melanogaster]
 gi|7299797|gb|AAF54976.1| flyers-cup, isoform B [Drosophila melanogaster]
 gi|220952870|gb|ACL88978.1| CG9611-PB [synthetic construct]
          Length = 650

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 191/420 (45%), Gaps = 61/420 (14%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP-AELGK 90
            N L  +PE +G L +L  L L  N IL +P    G  +L E +  NN +  +P A    
Sbjct: 260 HNDLTSLPEDMGLLRKLDCLYLQHNDILELPE-FEGNEALNELHASNNFIKIIPKAMCSN 318

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL  N++ E   E C LR     D+SNN++S LP  +  +  L  L + GNP+
Sbjct: 319 LPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPI 378

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT------------ 197
           +T+R  ++   T  +LK L  R       E      D  + +  +SVT            
Sbjct: 379 KTIRRDILQCGTTRILKTLHDRAVAKAKEEGGGV--DDASTSAGISVTRLRGGQMDDGDI 436

Query: 198 ------------SKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCA 242
                       ++ L++    L+++P ++++      +  +D +RN +  LP  L    
Sbjct: 437 PGNFPDRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMK 496

Query: 243 SLQT-LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
            L T L+LS N I   P  I +  + +S L L NN L  +P++                 
Sbjct: 497 DLVTELVLSNNVIGYVPQFI-SQFTRISFLNLSNNLLNDLPTE----------------- 538

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLT 360
                   F  L  L+EL +   +    P  +  LQ L IL  S+N ++ +   G +N+ 
Sbjct: 539 --------FGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHIKMLNVSGLQNMR 590

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            L+ LDL +N+I  +PP LG L  ++  L L GNP R  R  IL +GT A++ YL+D+IP
Sbjct: 591 RLSTLDLRNNDIETVPPILGNLT-NITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRIP 649



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 157/326 (48%), Gaps = 41/326 (12%)

Query: 94  LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L  LDL SN L     +   L+ L+VL L +N+L  LPPEIGK+  L +L ++ N L  L
Sbjct: 115 LNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQL 174

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
             ++ + P    L++L   +  NE  E +    DL  +        + L     N+ ++P
Sbjct: 175 PRAMYSLPE---LRHLN--ISYNEFVELNPDISDLHML--------EFLDGGHNNIQSLP 221

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
             I     +T L L  N I+ELPP+L +  SLQ + L  N +   P+  +  L  L CL 
Sbjct: 222 GGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPED-MGLLRKLDCLY 280

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
           L +N + ++P   F+    L  L  S N   +      S+LPHL+               
Sbjct: 281 LQHNDILELPE--FEGNEALNELHASNNFIKIIPKAMCSNLPHLK--------------- 323

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
                   ILDL  N +  +P+    L +L  LD+S+N IS LP  L  L   L +L+++
Sbjct: 324 --------ILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLA-HLISLQVE 374

Query: 393 GNPLRSIRRTILDRGTKAVLKYLKDK 418
           GNP+++IRR IL  GT  +LK L D+
Sbjct: 375 GNPIKTIRRDILQCGTTRILKTLHDR 400



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 2/172 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D   N+L+ L N L     ++TEL+ S N++  +P+ I   +R+  L+L  N +  +P+
Sbjct: 478 VDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPT 537

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDL 121
                 +L E  + NN    +P  + +L  L  L    N +K   V   Q   RLS LDL
Sbjct: 538 EFGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDL 597

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            NN +  +PP +G +T +  L L GNP R  R  ++   T A++ YLR R+P
Sbjct: 598 RNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRIP 649



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 182/420 (43%), Gaps = 65/420 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N LT +S   I +   LT L    N L  +P  IG L +L+RL++  N++  
Sbjct: 115 LNNLDLSSNTLTHISPK-IENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQ 173

Query: 61  IPSSISGC-------CSLAEF----------YM------GNNALSALPAELGKLSKLGTL 97
           +P ++           S  EF          +M      G+N + +LP  +G L +L  L
Sbjct: 174 LPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTAL 233

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            L  N +KE   +   +R L  +DL +N L+ LP ++G +  L  L L  N +       
Sbjct: 234 LLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLYLQHNDIL------ 287

Query: 157 VNGPTPALLKYLRSRLPENEDSEAST---TKEDLITMATRLSVTS----KELSLEGMNLS 209
                          LPE E +EA        + I +  +   ++    K L L    ++
Sbjct: 288 --------------ELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKIT 333

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P E+     + +LD+S N+I  LP  LSS A L +L +  N IK     IL   ++  
Sbjct: 334 ELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRI 393

Query: 270 CLKLDNNPLRQVPSDGF--------KDIPMLQILDLSYNIASLPEN-PPFSSLPHLQELY 320
              L +  + +   +G           I + ++     +   +P N P    L H + L 
Sbjct: 394 LKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTLA 453

Query: 321 LRRMQLREAPTDILRL---QQLRILDLSQNSLQSIPEGFKNLTSL-TELDLSDNNISALP 376
           +   +L   P  + ++   + + ++D ++N L ++P G +++  L TEL LS+N I  +P
Sbjct: 454 VNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVP 513



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 28/202 (13%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           SK ++LE + +       W    +  LDLS N++  + P++ +  SL  L L  N + + 
Sbjct: 93  SKAVNLEQLTIKE-EDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVEL 151

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P  I   L  L  L + +N L Q+P   +  +P L+ L++SYN                 
Sbjct: 152 PPEI-GKLEKLVRLNVSHNKLSQLPRAMYS-LPELRHLNISYN----------------- 192

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
                  +  E   DI  L  L  LD   N++QS+P G   L  LT L L  N+I  LPP
Sbjct: 193 -------EFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPP 245

Query: 378 ELGLLEPSLQALRLDGNPLRSI 399
           +L  +  SLQ + L  N L S+
Sbjct: 246 DLVNMR-SLQKIDLMHNDLTSL 266


>gi|220942590|gb|ACL83838.1| CG9611-PB [synthetic construct]
          Length = 651

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 191/420 (45%), Gaps = 61/420 (14%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP-AELGK 90
            N L  +PE +G L +L  L L  N IL +P    G  +L E +  NN +  +P A    
Sbjct: 260 HNDLTSLPEDMGLLRKLDCLYLQHNDILELPE-FEGNEALNELHASNNFIKIIPKAMCSN 318

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL  N++ E   E C LR     D+SNN++S LP  +  +  L  L + GNP+
Sbjct: 319 LPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPI 378

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT------------ 197
           +T+R  ++   T  +LK L  R       E      D  + +  +SVT            
Sbjct: 379 KTIRRDILQCGTTRILKTLHDRAVAKAKEEGGGV--DDASTSAGISVTRLRGGQMDDGDI 436

Query: 198 ------------SKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCA 242
                       ++ L++    L+++P ++++      +  +D +RN +  LP  L    
Sbjct: 437 PGNFPDRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMK 496

Query: 243 SLQT-LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
            L T L+LS N I   P  I +  + +S L L NN L  +P++                 
Sbjct: 497 DLVTELVLSNNVIGYVPQFI-SQFTRISFLNLSNNLLNDLPTE----------------- 538

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLT 360
                   F  L  L+EL +   +    P  +  LQ L IL  S+N ++ +   G +N+ 
Sbjct: 539 --------FGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHIKMLNVSGLQNMR 590

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            L+ LDL +N+I  +PP LG L  ++  L L GNP R  R  IL +GT A++ YL+D+IP
Sbjct: 591 RLSTLDLRNNDIETVPPILGNLT-NITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRIP 649



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 157/326 (48%), Gaps = 41/326 (12%)

Query: 94  LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L  LDL SN L     +   L+ L+VL L +N+L  LPPEIGK+  L +L ++ N L  L
Sbjct: 115 LNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQL 174

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
             ++ + P    L++L   +  NE  E +    DL  +        + L     N+ ++P
Sbjct: 175 PRAMYSLPE---LRHLN--ISYNEFVELNPDISDLHML--------EFLDGGHNNIQSLP 221

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
             I     +T L L  N I+ELPP+L +  SLQ + L  N +   P+  +  L  L CL 
Sbjct: 222 GGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPED-MGLLRKLDCLY 280

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
           L +N + ++P   F+    L  L  S N   +      S+LPHL+               
Sbjct: 281 LQHNDILELPE--FEGNEALNELHASNNFIKIIPKAMCSNLPHLK--------------- 323

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
                   ILDL  N +  +P+    L +L  LD+S+N IS LP  L  L   L +L+++
Sbjct: 324 --------ILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLA-HLISLQVE 374

Query: 393 GNPLRSIRRTILDRGTKAVLKYLKDK 418
           GNP+++IRR IL  GT  +LK L D+
Sbjct: 375 GNPIKTIRRDILQCGTTRILKTLHDR 400



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 2/172 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D   N+L+ L N L     ++TEL+ S N++  +P+ I   +R+  L+L  N +  +P+
Sbjct: 478 VDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPT 537

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDL 121
                 +L E  + NN    +P  + +L  L  L    N +K   V   Q   RLS LDL
Sbjct: 538 EFGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDL 597

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            NN +  +PP +G +T +  L L GNP R  R  ++   T A++ YLR R+P
Sbjct: 598 RNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRIP 649



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 182/420 (43%), Gaps = 65/420 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N LT +S   I +   LT L    N L  +P  IG L +L+RL++  N++  
Sbjct: 115 LNNLDLSSNTLTHISPK-IENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQ 173

Query: 61  IPSSISGC-------CSLAEF----------YM------GNNALSALPAELGKLSKLGTL 97
           +P ++           S  EF          +M      G+N + +LP  +G L +L  L
Sbjct: 174 LPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTAL 233

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            L  N +KE   +   +R L  +DL +N L+ LP ++G +  L  L L  N +       
Sbjct: 234 LLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLYLQHNDIL------ 287

Query: 157 VNGPTPALLKYLRSRLPENEDSEAST---TKEDLITMATRLSVTS----KELSLEGMNLS 209
                          LPE E +EA        + I +  +   ++    K L L    ++
Sbjct: 288 --------------ELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKIT 333

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P E+     + +LD+S N+I  LP  LSS A L +L +  N IK     IL   ++  
Sbjct: 334 ELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRI 393

Query: 270 CLKLDNNPLRQVPSDGF--------KDIPMLQILDLSYNIASLPEN-PPFSSLPHLQELY 320
              L +  + +   +G           I + ++     +   +P N P    L H + L 
Sbjct: 394 LKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTLA 453

Query: 321 LRRMQLREAPTDILRL---QQLRILDLSQNSLQSIPEGFKNLTSL-TELDLSDNNISALP 376
           +   +L   P  + ++   + + ++D ++N L ++P G +++  L TEL LS+N I  +P
Sbjct: 454 VNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVP 513



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 28/202 (13%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           SK ++LE + +       W    +  LDLS N++  + P++ +  SL  L L  N + + 
Sbjct: 93  SKAVNLEQLTIKE-EDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVEL 151

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P  I   L  L  L + +N L Q+P   +  +P L+ L++SYN                 
Sbjct: 152 PPEI-GKLEKLVRLNVSHNKLSQLPRAMYS-LPELRHLNISYN----------------- 192

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
                  +  E   DI  L  L  LD   N++QS+P G   L  LT L L  N+I  LPP
Sbjct: 193 -------EFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPP 245

Query: 378 ELGLLEPSLQALRLDGNPLRSI 399
           +L  +  SLQ + L  N L S+
Sbjct: 246 DLVNMR-SLQKIDLMHNDLTSL 266


>gi|312373148|gb|EFR20955.1| hypothetical protein AND_18230 [Anopheles darlingi]
          Length = 606

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 193/392 (49%), Gaps = 24/392 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+LT L N+ I +   L +L  SKN L  +P  +G L +L    +  N I  
Sbjct: 227 LQQLTLNNNRLTELPND-IVNLRNLHKLDLSKNDLKRLPPVMGELRKLECFYVQHNDIDE 285

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQL-RLSV 118
           +P   +GC +L E +M NN +  LPA+  + L +L  LDL  N+++    E   L  L+ 
Sbjct: 286 LPD-FTGCEALKELHMANNFIRTLPADFCENLPQLRVLDLRDNKIERLPDEIALLASLTR 344

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LDLSNN++S LP  +  +  L  L + GNP+R++R  ++   T  +LK LR R       
Sbjct: 345 LDLSNNTISSLPSCLSTLAHLVSLQVDGNPIRSIRRDIIQCGTQRILKTLRER------- 397

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                K+         + +SK         +  P ++++  +   L +S  ++ ++P ++
Sbjct: 398 --DGPKQSNSRSTETSTTSSKGTGGFFEEAATFP-DVYQMRKGRALIVSSKALVDMPEQV 454

Query: 239 ---SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              +  A++  + +S+NK+ + P  +    S L+ L +  N LR VPS  F     +  L
Sbjct: 455 FCDAREAAVYNVDVSKNKLAEVPAGLALLASQLTELNVSFNLLRTVPS-FFSQFDKIAYL 513

Query: 296 DLSYNIASLPENPPFSS-LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           +LS N  SL E P     L  L+EL +   QLR   + +  L+ L IL  S N ++ I  
Sbjct: 514 NLSNN--SLEELPEVVGLLVTLRELNVVNNQLRCLSSSVYELKGLEILLASGNRIEEIDA 571

Query: 355 ---GFKNLTSLTELDLSDNNISALPPELGLLE 383
              G   L  L  LDL++NNI  +PP LG L+
Sbjct: 572 SETGLGALKRLATLDLANNNIKHVPPVLGTLK 603



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 145/364 (39%), Gaps = 114/364 (31%)

Query: 113 QLRLSVLDLS-----------------------NNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           Q  L+ LDLS                       +N+L+ LP  IG +T L KL +  N L
Sbjct: 90  QKSLTTLDLSSNTLTVISENIQNLADLTVLNLQDNALTSLPEGIGALTKLSKLNVARNKL 149

Query: 150 RTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMAT----------RLS--- 195
             L  S         LK L+   L  NE  E      DLI + T          RL    
Sbjct: 150 AELPDSFFG------LKELKHLNLSHNEFPEVHPNISDLIMLETLKGTNLYFHSRLRSRG 203

Query: 196 ---------------------VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
                                V  ++L+L    L+ +P++I     + KLDLS+N ++ L
Sbjct: 204 HEPQDISFNSINLLPGGIGFLVRLQQLTLNNNRLTELPNDIVNLRNLHKLDLSKNDLKRL 263

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           PP +     L+   +  N I + PD   T   +L  L + NN +R +P+D  +++P L++
Sbjct: 264 PPVMGELRKLECFYVQHNDIDELPD--FTGCEALKELHMANNFIRTLPADFCENLPQLRV 321

Query: 295 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           LDL  N                        ++   P +I  L  L  LDLS N++ S+P 
Sbjct: 322 LDLRDN------------------------KIERLPDEIALLASLTRLDLSNNTISSLPS 357

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
               L  L                         +L++DGNP+RSIRR I+  GT+ +LK 
Sbjct: 358 CLSTLAHLV------------------------SLQVDGNPIRSIRRDIIQCGTQRILKT 393

Query: 415 LKDK 418
           L+++
Sbjct: 394 LRER 397



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 190/428 (44%), Gaps = 49/428 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N LTV+S N I +   LT L    N L  +PE IG+L++L +L++ +N++  
Sbjct: 93  LTTLDLSSNTLTVISEN-IQNLADLTVLNLQDNALTSLPEGIGALTKLSKLNVARNKLAE 151

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD-----LHS------NQLKEYCV 109
           +P S  G   L    + +N    +   +  L  L TL       HS      ++ ++   
Sbjct: 152 LPDSFFGLKELKHLNLSHNEFPEVHPNISDLIMLETLKGTNLYFHSRLRSRGHEPQDISF 211

Query: 110 EACQL---------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 160
            +  L         RL  L L+NN L+ LP +I  +  L KL L+ N L+ L       P
Sbjct: 212 NSINLLPGGIGFLVRLQQLTLNNNRLTELPNDIVNLRNLHKLDLSKNDLKRL------PP 265

Query: 161 TPALLKYLRSRLPENEDSEA---STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 217
               L+ L     ++ D +     T  E L           KEL +    +  +P++  E
Sbjct: 266 VMGELRKLECFYVQHNDIDELPDFTGCEAL-----------KELHMANNFIRTLPADFCE 314

Query: 218 A-GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
              ++  LDL  N I+ LP E++  ASL  L LS N I   P + L++L+ L  L++D N
Sbjct: 315 NLPQLRVLDLRDNKIERLPDEIALLASLTRLDLSNNTISSLP-SCLSTLAHLVSLQVDGN 373

Query: 277 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT--DIL 334
           P+R +  D  +     +IL          ++   S+               EA T  D+ 
Sbjct: 374 PIRSIRRDIIQ-CGTQRILKTLRERDGPKQSNSRSTETSTTSSKGTGGFFEEAATFPDVY 432

Query: 335 RLQQLRILDLSQNSLQSIPEGF---KNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           ++++ R L +S  +L  +PE         ++  +D+S N ++ +P  L LL   L  L +
Sbjct: 433 QMRKGRALIVSSKALVDMPEQVFCDAREAAVYNVDVSKNKLAEVPAGLALLASQLTELNV 492

Query: 392 DGNPLRSI 399
             N LR++
Sbjct: 493 SFNLLRTV 500



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +DV  NKL  +   L    + LTEL  S NLL  +P       ++  L+L  N +  +P 
Sbjct: 466 VDVSKNKLAEVPAGLALLASQLTELNVSFNLLRTVPSFFSQFDKIAYLNLSNNSLEELPE 525

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVL 119
            +    +L E  + NN L  L + + +L  L  L    N+++E       L    RL+ L
Sbjct: 526 VVGLLVTLRELNVVNNQLRCLSSSVYELKGLEILLASGNRIEEIDASETGLGALKRLATL 585

Query: 120 DLSNNSLSGLPPEIGKMTTL 139
           DL+NN++  +PP +G +  +
Sbjct: 586 DLANNNIKHVPPVLGTLKNI 605


>gi|161078264|ref|NP_001097774.1| flyers-cup, isoform E [Drosophila melanogaster]
 gi|158030248|gb|ABW08664.1| flyers-cup, isoform E [Drosophila melanogaster]
          Length = 620

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 191/420 (45%), Gaps = 61/420 (14%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP-AELGK 90
            N L  +PE +G L +L  L L  N IL +P    G  +L E +  NN +  +P A    
Sbjct: 230 HNDLTSLPEDMGLLRKLDCLYLQHNDILELPE-FEGNEALNELHASNNFIKIIPKAMCSN 288

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL  N++ E   E C LR     D+SNN++S LP  +  +  L  L + GNP+
Sbjct: 289 LPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPI 348

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT------------ 197
           +T+R  ++   T  +LK L  R       E      D  + +  +SVT            
Sbjct: 349 KTIRRDILQCGTTRILKTLHDRAVAKAKEEGGGV--DDASTSAGISVTRLRGGQMDDGDI 406

Query: 198 ------------SKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCA 242
                       ++ L++    L+++P ++++      +  +D +RN +  LP  L    
Sbjct: 407 PGNFPDRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMK 466

Query: 243 SLQT-LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
            L T L+LS N I   P  I +  + +S L L NN L  +P++                 
Sbjct: 467 DLVTELVLSNNVIGYVPQFI-SQFTRISFLNLSNNLLNDLPTE----------------- 508

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLT 360
                   F  L  L+EL +   +    P  +  LQ L IL  S+N ++ +   G +N+ 
Sbjct: 509 --------FGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHIKMLNVSGLQNMR 560

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            L+ LDL +N+I  +PP LG L  ++  L L GNP R  R  IL +GT A++ YL+D+IP
Sbjct: 561 RLSTLDLRNNDIETVPPILGNLT-NITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRIP 619



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 157/326 (48%), Gaps = 41/326 (12%)

Query: 94  LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L  LDL SN L     +   L+ L+VL L +N+L  LPPEIGK+  L +L ++ N L  L
Sbjct: 85  LNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQL 144

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
             ++ + P    L++L   +  NE  E +    DL  +        + L     N+ ++P
Sbjct: 145 PRAMYSLPE---LRHLN--ISYNEFVELNPDISDLHML--------EFLDGGHNNIQSLP 191

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
             I     +T L L  N I+ELPP+L +  SLQ + L  N +   P+  +  L  L CL 
Sbjct: 192 GGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPED-MGLLRKLDCLY 250

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
           L +N + ++P   F+    L  L  S N   +      S+LPHL+               
Sbjct: 251 LQHNDILELPE--FEGNEALNELHASNNFIKIIPKAMCSNLPHLK--------------- 293

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
                   ILDL  N +  +P+    L +L  LD+S+N IS LP  L  L   L +L+++
Sbjct: 294 --------ILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLA-HLISLQVE 344

Query: 393 GNPLRSIRRTILDRGTKAVLKYLKDK 418
           GNP+++IRR IL  GT  +LK L D+
Sbjct: 345 GNPIKTIRRDILQCGTTRILKTLHDR 370



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 2/172 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D   N+L+ L N L     ++TEL+ S N++  +P+ I   +R+  L+L  N +  +P+
Sbjct: 448 VDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPT 507

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDL 121
                 +L E  + NN    +P  + +L  L  L    N +K   V   Q   RLS LDL
Sbjct: 508 EFGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDL 567

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            NN +  +PP +G +T +  L L GNP R  R  ++   T A++ YLR R+P
Sbjct: 568 RNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRIP 619



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 182/420 (43%), Gaps = 65/420 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N LT +S   I +   LT L    N L  +P  IG L +L+RL++  N++  
Sbjct: 85  LNNLDLSSNTLTHISPK-IENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQ 143

Query: 61  IPSSISGC-------CSLAEF----------YM------GNNALSALPAELGKLSKLGTL 97
           +P ++           S  EF          +M      G+N + +LP  +G L +L  L
Sbjct: 144 LPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTAL 203

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            L  N +KE   +   +R L  +DL +N L+ LP ++G +  L  L L  N +       
Sbjct: 204 LLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLYLQHNDIL------ 257

Query: 157 VNGPTPALLKYLRSRLPENEDSEAST---TKEDLITMATRLSVTS----KELSLEGMNLS 209
                          LPE E +EA        + I +  +   ++    K L L    ++
Sbjct: 258 --------------ELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKIT 303

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P E+     + +LD+S N+I  LP  LSS A L +L +  N IK     IL   ++  
Sbjct: 304 ELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRI 363

Query: 270 CLKLDNNPLRQVPSDGF--------KDIPMLQILDLSYNIASLPEN-PPFSSLPHLQELY 320
              L +  + +   +G           I + ++     +   +P N P    L H + L 
Sbjct: 364 LKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTLA 423

Query: 321 LRRMQLREAPTDILRL---QQLRILDLSQNSLQSIPEGFKNLTSL-TELDLSDNNISALP 376
           +   +L   P  + ++   + + ++D ++N L ++P G +++  L TEL LS+N I  +P
Sbjct: 424 VNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVP 483



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 98/225 (43%), Gaps = 31/225 (13%)

Query: 178 SEASTTKEDL---ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
           SE  T  EDL   +         SK ++LE + +       W    +  LDLS N++  +
Sbjct: 40  SEPPTRAEDLPKRLYDINEADADSKAVNLEQLTIKE-EDAWWNQVPLNNLDLSSNTLTHI 98

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
            P++ +  SL  L L  N + + P  I   L  L  L + +N L Q+P   +  +P L+ 
Sbjct: 99  SPKIENLQSLTVLTLHDNALVELPPEI-GKLEKLVRLNVSHNKLSQLPRAMYS-LPELRH 156

Query: 295 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           L++SYN                        +  E   DI  L  L  LD   N++QS+P 
Sbjct: 157 LNISYN------------------------EFVELNPDISDLHMLEFLDGGHNNIQSLPG 192

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           G   L  LT L L  N+I  LPP+L  +  SLQ + L  N L S+
Sbjct: 193 GIGFLVRLTALLLPYNHIKELPPDLVNMR-SLQKIDLMHNDLTSL 236


>gi|260788632|ref|XP_002589353.1| hypothetical protein BRAFLDRAFT_218172 [Branchiostoma floridae]
 gi|229274530|gb|EEN45364.1| hypothetical protein BRAFLDRAFT_218172 [Branchiostoma floridae]
          Length = 343

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 175/397 (44%), Gaps = 64/397 (16%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T L  L  SKN L  +PE IG L +L RL ++ N++  +P  +    +L    + NN LS
Sbjct: 3   TDLEFLNVSKNKLTSIPEAIGRLQKLSRLYIYGNQLTEVPPGVCSLPNLEVLDVSNNNLS 62

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 141
             P  + KL KL  L ++ NQL E     C L  L VL++ NN LS  PP + K+  LR 
Sbjct: 63  TFPPGVEKLQKLRELHINDNQLTEVPSGVCSLPNLEVLNVRNNKLSTFPPGVEKLQKLRD 122

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 201
           L +  N L  +   + + P                + EA                    L
Sbjct: 123 LGIHDNQLTEVPPGVCSLP----------------NLEA--------------------L 146

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
           ++   NLS  P  + +  ++TKL +  N + E+P  + S  +L+ L +  NK+  +P  +
Sbjct: 147 NVSNNNLSTFPPGVEKLQKLTKLGIYGNQLTEVPSGVCSLPNLELLRVDNNKLSTFPPGV 206

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYL 321
              L  L  L +++N L +VPS G   +P  ++L+++ N                     
Sbjct: 207 -EKLQKLRELHINSNQLTEVPS-GVLSLPNHEVLNVAKN--------------------- 243

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGL 381
               +R  P+D+ RL +++ L ++       P     L +L +L         +P E+G 
Sbjct: 244 ---PIRRLPSDVTRLARVKTLGINDCQFDEFPRQVLQLKTLEKLYAGGCKFDIVPDEVGN 300

Query: 382 LEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           L+  L  L + GNPL    + +  +GT A++ +LK +
Sbjct: 301 LQ-HLWDLDVSGNPLTYPPQDVCKQGTGAIMAFLKQE 336



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 146/306 (47%), Gaps = 17/306 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S+L + GN+LT +    + S   L  L  S N L+  P  +  L +L  L ++ N++  
Sbjct: 28  LSRLYIYGNQLTEVPPG-VCSLPNLEVLDVSNNNLSTFPPGVEKLQKLRELHINDNQLTE 86

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +PS +    +L    + NN LS  P  + KL KL  L +H NQL E     C L  L  L
Sbjct: 87  VPSGVCSLPNLEVLNVRNNKLSTFPPGVEKLQKLRDLGIHDNQLTEVPPGVCSLPNLEAL 146

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           ++SNN+LS  PP + K+  L KL + GN L  + S + + P   LL     R+  N+ S 
Sbjct: 147 NVSNNNLSTFPPGVEKLQKLTKLGIYGNQLTEVPSGVCSLPNLELL-----RVDNNKLST 201

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        +EL +    L+ +PS +        L++++N I+ LP +++
Sbjct: 202 FPPGVEKLQKL--------RELHINSNQLTEVPSGVLSLPNHEVLNVAKNPIRRLPSDVT 253

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
             A ++TL ++  +  ++P  +L  L +L  L         VP D   ++  L  LD+S 
Sbjct: 254 RLARVKTLGINDCQFDEFPRQVL-QLKTLEKLYAGGCKFDIVP-DEVGNLQHLWDLDVSG 311

Query: 300 NIASLP 305
           N  + P
Sbjct: 312 NPLTYP 317



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 5/181 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++KL + GN+LT + +  + S   L  L    N L+  P  +  L +L  L ++ N++  
Sbjct: 166 LTKLGIYGNQLTEVPSG-VCSLPNLELLRVDNNKLSTFPPGVEKLQKLRELHINSNQLTE 224

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +PS +    +     +  N +  LP+++ +L+++ TL ++  Q  E+  +  QL+ L  L
Sbjct: 225 VPSGVLSLPNHEVLNVAKNPIRRLPSDVTRLARVKTLGINDCQFDEFPRQVLQLKTLEKL 284

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
                    +P E+G +  L  L ++GNPL      +    T A++ +L+    E E  E
Sbjct: 285 YAGGCKFDIVPDEVGNLQHLWDLDVSGNPLTYPPQDVCKQGTGAIMAFLKQ---EAEKGE 341

Query: 180 A 180
           A
Sbjct: 342 A 342


>gi|380015498|ref|XP_003691738.1| PREDICTED: LOW QUALITY PROTEIN: protein lap4-like [Apis florea]
          Length = 2046

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 182/389 (46%), Gaps = 43/389 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL+   N +  +P+    L +L +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +  L  L   D  SN +        QLR L+VL L++ SL+ LPP+ G +  L+ L 
Sbjct: 99  PENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L++L  SL       L K  R  L +N                            
Sbjct: 159 LRENLLKSLPESLSQ-----LYKLERLDLGDN---------------------------- 185

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
              ++  +P+ I E   + +L L  N +Q LPPE+    +L  L +S N+++D P+ I  
Sbjct: 186 ---DIEVLPAHIGELPALQELWLDHNQLQHLPPEIGELKTLVCLDVSENRLEDLPEEI-G 241

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
            L SL+ L L  N + ++P DG  ++  L IL +  N +++L  NP      +LQEL L 
Sbjct: 242 GLESLTDLHLSQNVIEKLP-DGLGELKKLTILKVDQNRLSTL--NPNIGRCENLQELILT 298

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
              L E P  I +L  L  L++ +NSLQS+P    NL  L  L L DN +  LP E+G  
Sbjct: 299 ENFLLELPVSIGKLLNLNNLNVDRNSLQSLPTETGNLKQLGVLSLRDNKLQYLPIEVGQC 358

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAV 411
             +L  L + GN L+ +  ++++   KAV
Sbjct: 359 T-ALHVLDVSGNRLQYLPYSLINLNLKAV 386



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 5/192 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S + +EL L+  ++  +P   +   ++ KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRSLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D P+ I  +L +L      +NP+ ++P+ GF  +  L +L L+  ++ +LP  P F 
Sbjct: 94  DIPDIPENI-KNLRALQVADFSSNPIPRLPA-GFVQLRNLTVLGLNDMSLTNLP--PDFG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  LQ L LR   L+  P  + +L +L  LDL  N ++ +P     L +L EL L  N 
Sbjct: 150 SLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGELPALQELWLDHNQ 209

Query: 372 ISALPPELGLLE 383
           +  LPPE+G L+
Sbjct: 210 LQHLPPEIGELK 221



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 152/342 (44%), Gaps = 40/342 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +PE I +L  L   D   N I  +P+      +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LP + G L  L +L+L  N LK       QL +L  LDL +N +  LP  IG++ 
Sbjct: 139 MSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGELP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L++L L  N L+ L   +    T   L    +RL            EDL      L   
Sbjct: 199 ALQELWLDHNQLQHLPPEIGELKTLVCLDVSENRL------------EDLPEEIGGLESL 246

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           + +L L    +  +P  + E  ++T L + +N +  L P +  C +LQ LIL+ N + + 
Sbjct: 247 T-DLHLSQNVIEKLPDGLGELKKLTILKVDQNRLSTLNPNIGRCENLQELILTENFLLEL 305

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P +I   L +L+ L +D N L+ +P++                           +L  L 
Sbjct: 306 PVSI-GKLLNLNNLNVDRNSLQSLPTE-------------------------TGNLKQLG 339

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            L LR  +L+  P ++ +   L +LD+S N LQ +P    NL
Sbjct: 340 VLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINL 381



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L V+ N+L+ L+ N I     L ELI ++N L  +P +IG L  L  L++ +N + S+P+
Sbjct: 272 LKVDQNRLSTLNPN-IGRCENLQELILTENFLLELPVSIGKLLNLNNLNVDRNSLQSLPT 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
                  L    + +N L  LP E+G+ + L  LD+  N+L+        L L  + LS 
Sbjct: 331 ETGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINLNLKAVWLSK 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|417765366|ref|ZP_12413328.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352303|gb|EJP04499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 385

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 167/344 (48%), Gaps = 44/344 (12%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S++ L  +P+ IG L  L  L+   N++ ++P  I    +L E ++ NN L+ LP E+G+
Sbjct: 60  SRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQ 119

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  L L++NQL     E  +L+ L  L+L  N L+ LP EIG++  L++L L+ N L
Sbjct: 120 LQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRL 179

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN-- 207
                               + LPE      S  K                LSL G N  
Sbjct: 180 --------------------TILPEEIGQLESLRK----------------LSLGGKNKP 203

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
            + +P EI +   + +L L  N +  LP E+    +L+ L L +N++   P  I   L +
Sbjct: 204 FTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEI-GQLKN 262

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L L  N L  +P +    +  LQ+LDL  N + +LP+      L +LQ+L+L R QL
Sbjct: 263 LLVLDLSGNQLTILPKE-ITQLQNLQVLDLYQNRLTTLPK--EIGQLQNLQKLHLSRNQL 319

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
              P +I RLQ+L  L L  N L ++PE  K L +L +L L +N
Sbjct: 320 TTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNN 363



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 168/344 (48%), Gaps = 32/344 (9%)

Query: 68  CCSLAEFYMGNNALSA------LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 120
            CSL +F+   N  +       L   L   +++  LDL  ++LK    E  QL+ L +L+
Sbjct: 22  VCSLTQFHAEENHTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILN 81

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
             NN L+ LP EIGK+  L++L L  N L TL   +       +L           +++ 
Sbjct: 82  SENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHL--------NNNQL 133

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
           +T  E++  +        +EL+L    L+ +P EI     + +L LS N +  LP E+  
Sbjct: 134 TTLPEEIGKLQN-----LQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQ 188

Query: 241 CASLQTLILSRNKIKDWPDAIL----TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
             SL+ L L     K+ P  IL    T L +L  L L  N L  +P +    +  L+ILD
Sbjct: 189 LESLRKLSLGG---KNKPFTILPKEITQLQNLQELHLKFNRLTVLPKE-IGQLQNLRILD 244

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N +  LP+      L +L  L L   QL   P +I +LQ L++LDL QN L ++P+ 
Sbjct: 245 LYQNRLTILPK--EIGQLKNLLVLDLSGNQLTILPKEITQLQNLQVLDLYQNRLTTLPKE 302

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
              L +L +L LS N ++ LP E+G L+  L++L LD N L ++
Sbjct: 303 IGQLQNLQKLHLSRNQLTTLPKEIGRLQ-KLESLGLDHNQLATL 345



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 69/135 (51%), Gaps = 1/135 (0%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L EL    N L  +P+ IG L  L  LDL+QNR+  +P  I    +L    +  
Sbjct: 211 ITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSG 270

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP E+ +L  L  LDL+ N+L     E  QL+ L  L LS N L+ LP EIG++ 
Sbjct: 271 NQLTILPKEITQLQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQ 330

Query: 138 TLRKLLLTGNPLRTL 152
            L  L L  N L TL
Sbjct: 331 KLESLGLDHNQLATL 345



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 85/169 (50%), Gaps = 2/169 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L ++ N+LTVL    I     L  L   +N L  +P+ IG L  L+ LDL  N++  
Sbjct: 217 LQELHLKFNRLTVLPKE-IGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTI 275

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I+   +L    +  N L+ LP E+G+L  L  L L  NQL     E  +L +L  L
Sbjct: 276 LPKEITQLQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESL 335

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
            L +N L+ LP EI ++  L+KL L  NPL + +   +    P  + Y 
Sbjct: 336 GLDHNQLATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRKLLPQCIIYF 384


>gi|410976091|ref|XP_003994459.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Felis
           catus]
          Length = 536

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 179/358 (50%), Gaps = 19/358 (5%)

Query: 49  IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 108
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G L  L TL L+ N L    
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLP 162

Query: 109 VEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 167
                L+ L +LDL +N L  +P  + ++ +L  L L  N + T+   + N    ++L  
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSI 222

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
             +++            + L      LS  S+ L L    LSAIP  + +   + +L+L 
Sbjct: 223 RENKI------------KQLPAEIGNLSSLSR-LGLRYNRLSAIPRSLAKCSALEELNLE 269

Query: 228 RNSIQELPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
            N+I  LP  L SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F
Sbjct: 270 NNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 329

Query: 287 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
               +L  L++  N + SLP +  F +   + EL L   QL + P D+  L  L +L LS
Sbjct: 330 SRAKVLSKLNMKDNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILS 387

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            N L+ +P G  NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 388 NNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 444



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 214/437 (48%), Gaps = 28/437 (6%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +LD+    + +L ++ I   T LTEL    N L  +P  +G L  L+ L L++N + S+P
Sbjct: 104 RLDLSKRSIHILPSS-IKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLP 162

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
            S+     L    + +N L  +P+ + +L  L TL L  N++     +   L +LS+L +
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSI 222

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDS 178
             N +  LP EIG +++L +L L  N L  +  SL        L       S LPE+  S
Sbjct: 223 RENKIKQLPAEIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISALPESLLS 282

Query: 179 EASTTKEDLITMA------------TRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLD 225
             S  K + +T+A            ++ S T   L++E   ++ IP  I+   ++ +KL+
Sbjct: 283 --SLVKLNSLTLARNCFQLYPVGGPSQFS-TIYSLNMEHNRINKIPFGIFSRAKVLSKLN 339

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           +  N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G
Sbjct: 340 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HG 397

Query: 286 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
             ++  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L L
Sbjct: 398 LGNLRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGL 455

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            +N L  +PE    L +L EL L+DN N+ +LP EL L    L  + ++  PL  +   I
Sbjct: 456 GENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCS-KLSIMSIENCPLSHLPPQI 514

Query: 404 LDRGTKAVLKYLKDKIP 420
           +  G   ++++LK + P
Sbjct: 515 VAGGPSFIIQFLKMQGP 531



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 26/183 (14%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL L+ N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++                         L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-------------------------LDSLT 195

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            LYLR  ++     DI  L +L +L + +N ++ +P    NL+SL+ L L  N +SA+P 
Sbjct: 196 TLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGNLSSLSRLGLRYNRLSAIPR 255

Query: 378 ELG 380
            L 
Sbjct: 256 SLA 258



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 152/318 (47%), Gaps = 27/318 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L +  N++T +  + I + + L+ L   +N +  +P  IG+LS L RL L  NR+ +
Sbjct: 194 LTTLYLRFNRITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGNLSSLSRLGLRYNRLSA 252

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV- 118
           IP S++ C +L E  + NN +SALP   L  L KL +L L  N  + Y V       ++ 
Sbjct: 253 IPRSLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIY 312

Query: 119 -LDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 176
            L++ +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  
Sbjct: 313 SLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIP 372

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
           +  +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP 
Sbjct: 373 EDVSGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPN 419

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E++    LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+
Sbjct: 420 EIAYLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLE 474

Query: 297 LSYNIASLPENPPFSSLP 314
             Y    L +NP   SLP
Sbjct: 475 ELY----LNDNPNLHSLP 488


>gi|405958960|gb|EKC25038.1| hypothetical protein CGI_10020952 [Crassostrea gigas]
          Length = 779

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 178/374 (47%), Gaps = 45/374 (12%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
            +   N L  +P+TI  L  L  +DL  N + ++P +I    +L E   GNN L  LPA 
Sbjct: 67  FLGENNRLKKLPKTISDLDNLEFIDLRNNSLGALPGTIFKIKALKELQCGNNGLKTLPAT 126

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 147
           + K   L           EY           L   NN +  LP  I K   L  + LT N
Sbjct: 127 INKAPSL-----------EY-----------LYAQNNKIKALPKTINKCPALVLIDLTEN 164

Query: 148 PLRTLRSSLVN-GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
            +R+++ ++   G T  L K     LP+                AT  +   K+L + G 
Sbjct: 165 VIRSVKKTIYEVGATLILSKNRLVELPD----------------ATVKNPALKKLIVSGN 208

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
           ++S IP  I     +T LDLS N + ELP ++     L  L +S+NKI   P+ I T   
Sbjct: 209 SISHIPDNINNVLTLTYLDLSDNDLTELPNQIGYLKYLHYLNISKNKIGYLPEEITTLHF 268

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
           +L+ L   +N ++++P +  K +  LQ+L+L+ N I +LP+N  F  L +++ L L   +
Sbjct: 269 ALTFLHASDNQIKRLPKEIHK-LQRLQVLELADNQIETLPDN--FYQLKNIKRLDLSGNK 325

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L  A   I +L+ +  + L++NSL ++PE   NL SL  +D++ N I  +P  L  +  +
Sbjct: 326 LSTA-AGISKLKSVEHIGLARNSLTALPEDLPNLKSLVSIDVTGNYIKVIPENLHKV-GT 383

Query: 386 LQALRLDGNPLRSI 399
           L++ +   N + +I
Sbjct: 384 LKSFKASDNKISNI 397



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 203/435 (46%), Gaps = 76/435 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+ GNKL+  +   I+    +  +  ++N L  +PE + +L  L+ +D+  N I  
Sbjct: 316 IKRLDLSGNKLSTAAG--ISKLKSVEHIGLARNSLTALPEDLPNLKSLVSIDVTGNYIKV 373

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           IP ++    +L  F   +N +S +P  LG+   +  L +  N+L+    +  +LR L V 
Sbjct: 374 IPENLHKVGTLKSFKASDNKISNIPESLGENQLITELCVSKNRLQGLPQDMKKLRSLEVF 433

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDS 178
           ++++N ++ LP     +  LR L + GN L  L           L K L S  L  N  S
Sbjct: 434 EMADNDINALPKTFDFLKFLRVLDVAGNGLNEL----------MLPKTLTSLNLSSNPIS 483

Query: 179 EASTTKEDLITM------ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
             S   + ++T+      A++++V    L LE + L  +PS +     + KL++  N I+
Sbjct: 484 LPSVDPKSVLTILGEKTWASQMTV----LELESIKLEEVPSTLSHMKLLKKLNMRSNLIK 539

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            +P EL     L+ L +S N++ D PD+ ++++ +L  L    N ++     G   +  L
Sbjct: 540 VIPDELCKLRLLEELDVSNNELADLPDS-MSNMKNLRKLNASENKIQHF-CPGLCLLHQL 597

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQEL-------------------------------- 319
           + ++LSYN I  LPEN  F  L  +  L                                
Sbjct: 598 EEINLSYNNIMELPEN--FGELNKVIRLDLSNNELMGLPEDKWDVLASMLFLDVSKNHIN 655

Query: 320 -------YLRRMQLREA--------PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
                  YL R+Q+ +A        P DI+++  L +LD+S N L+S+P+    L +LTE
Sbjct: 656 VVPTDLPYLYRIQVLKAACNDLTCLPGDIIKMVGLEVLDVSDNLLESLPDSICKLPNLTE 715

Query: 365 LDLSDNNISALPPEL 379
           L++SDN I + P ++
Sbjct: 716 LNVSDNKIKSFPGKM 730



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 171/384 (44%), Gaps = 50/384 (13%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L +LI S N ++ +P+ I ++  L  LDL  N +  +P+ I     L    +  N +  L
Sbjct: 200 LKKLIVSGNSISHIPDNINNVLTLTYLDLSDNDLTELPNQIGYLKYLHYLNISKNKIGYL 259

Query: 85  PAELGKLS-KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKL 142
           P E+  L   L  L    NQ+K    E  +L RL VL+L++N +  LP    ++  +++L
Sbjct: 260 PEEITTLHFALTFLHASDNQIKRLPKEIHKLQRLQVLELADNQIETLPDNFYQLKNIKRL 319

Query: 143 LLTGNPLRTLR--SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 200
            L+GN L T    S L +     L +   + LP           EDL  + + +S+    
Sbjct: 320 DLSGNKLSTAAGISKLKSVEHIGLARNSLTALP-----------EDLPNLKSLVSI---- 364

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
             + G  +  IP  + + G +     S N I  +P  L     +  L +S+N+++  P  
Sbjct: 365 -DVTGNYIKVIPENLHKVGTLKSFKASDNKISNIPESLGENQLITELCVSKNRLQGLPQD 423

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD-------------------LSYNI 301
            +  L SL   ++ +N +  +P   F  +  L++LD                   LS N 
Sbjct: 424 -MKKLRSLEVFEMADNDINALPK-TFDFLKFLRVLDVAGNGLNELMLPKTLTSLNLSSNP 481

Query: 302 ASLPENPPFSSLPHLQE---------LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            SLP   P S L  L E         L L  ++L E P+ +  ++ L+ L++  N ++ I
Sbjct: 482 ISLPSVDPKSVLTILGEKTWASQMTVLELESIKLEEVPSTLSHMKLLKKLNMRSNLIKVI 541

Query: 353 PEGFKNLTSLTELDLSDNNISALP 376
           P+    L  L ELD+S+N ++ LP
Sbjct: 542 PDELCKLRLLEELDVSNNELADLP 565



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 179/399 (44%), Gaps = 25/399 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D+  N L  L    I     L EL    N L  +P TI     L  L    N+I ++P 
Sbjct: 90  IDLRNNSLGALPGT-IFKIKALKELQCGNNGLKTLPATINKAPSLEYLYAQNNKIKALPK 148

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
           +I+ C +L    +  N + ++   + ++    TL L  N+L E      +   L  L +S
Sbjct: 149 TINKCPALVLIDLTENVIRSVKKTIYEVG--ATLILSKNRLVELPDATVKNPALKKLIVS 206

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAS 181
            NS+S +P  I  + TL  L L+ N L  L + +        LKYL    + +N   +  
Sbjct: 207 GNSISHIPDNINNVLTLTYLDLSDNDLTELPNQI------GYLKYLHYLNISKN---KIG 257

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
              E++ T+   L+     L      +  +P EI +   +  L+L+ N I+ LP      
Sbjct: 258 YLPEEITTLHFALTF----LHASDNQIKRLPKEIHKLQRLQVLELADNQIETLPDNFYQL 313

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 300
            +++ L LS NK+     A ++ L S+  + L  N L  +P D   ++  L  +D++ N 
Sbjct: 314 KNIKRLDLSGNKLSTA--AGISKLKSVEHIGLARNSLTALPED-LPNLKSLVSIDVTGNY 370

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
           I  +PEN     +  L+       ++   P  +   Q +  L +S+N LQ +P+  K L 
Sbjct: 371 IKVIPEN--LHKVGTLKSFKASDNKISNIPESLGENQLITELCVSKNRLQGLPQDMKKLR 428

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           SL   +++DN+I+ALP     L+  L+ L + GN L  +
Sbjct: 429 SLEVFEMADNDINALPKTFDFLK-FLRVLDVAGNGLNEL 466



 Score = 45.4 bits (106), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 1/103 (0%)

Query: 310 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
            S L +L+ + LR   L   P  I +++ L+ L    N L+++P       SL  L   +
Sbjct: 81  ISDLDNLEFIDLRNNSLGALPGTIFKIKALKELQCGNNGLKTLPATINKAPSLEYLYAQN 140

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVL 412
           N I ALP  +    P+L  + L  N +RS+++TI + G   +L
Sbjct: 141 NKIKALPKTINKC-PALVLIDLTENVIRSVKKTIYEVGATLIL 182


>gi|398341370|ref|ZP_10526073.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 398

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 171/373 (45%), Gaps = 48/373 (12%)

Query: 39  PETIGSLSRLIR-------LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           P+T   L+  I+       LDL Q ++ ++P+ I    +L   Y+  N L  LP E+G+L
Sbjct: 30  PKTYMDLTEAIQNPLDVRVLDLSQQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQL 89

Query: 92  SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
             L  L+L  NQL+    E  QL+ L  L LS N L  LP EI ++  L++L L  N L 
Sbjct: 90  QNLRVLELIHNQLETLPNEIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLT 149

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
           TL + +        LK L+                               L L    L  
Sbjct: 150 TLPTEI------GQLKNLQR------------------------------LQLWNNQLMT 173

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +P EI +   +  L+L  N +  LP E+    +LQ L L  N++   P+ I   L  L  
Sbjct: 174 LPEEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQELYLGSNQLTALPNEI-GQLQKLQE 232

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 330
           L L  N L  +P++    +  LQ L L  N  ++  N     L +LQ LYLR  +L    
Sbjct: 233 LSLSTNRLTTLPNE-IGQLQNLQDLYLGSNQLTILPNE-IGQLKNLQTLYLRSNRLTTLS 290

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
            DI +LQ L+ LDL  N L + P+  + L +L  LDL  N ++ LP E+G L+ +LQ   
Sbjct: 291 KDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLK-NLQVFE 349

Query: 391 LDGNPLRSIRRTI 403
           L+ N L ++ + I
Sbjct: 350 LNNNQLTTLPKEI 362



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 176/396 (44%), Gaps = 65/396 (16%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+   KL  L N  I     L  L  S N L  +P+ IG L  L  L+L  N++ ++P+
Sbjct: 49  LDLSQQKLKTLPNE-IEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLETLPN 107

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L   Y+  N L  LP E+ +L  L  L L  NQL     E  QL+ L  L L 
Sbjct: 108 EIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLQLW 167

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN L  LP EIG++  L+ L L  N L  L + +  G    L                  
Sbjct: 168 NNQLMTLPEEIGQLKNLQTLNLGYNQLTALPNEI--GQLQNL------------------ 207

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                           +EL L    L+A+P+EI +  ++ +L LS N +  LP E+    
Sbjct: 208 ----------------QELYLGSNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQ 251

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           +LQ L L  N++   P+ I   L +L  L L +N L  +     KDI  LQ         
Sbjct: 252 NLQDLYLGSNQLTILPNEI-GQLKNLQTLYLRSNRLTTLS----KDIEQLQ--------- 297

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
                       +L+ L L   QL   P +I +L+ L++LDL  N L ++P+    L +L
Sbjct: 298 ------------NLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNL 345

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
              +L++N ++ LP E+G L+ +LQ L L  N L S
Sbjct: 346 QVFELNNNQLTTLPKEIGQLQ-NLQELYLIDNQLSS 380



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 125/279 (44%), Gaps = 39/279 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+LT L    I     L  L    N L  +PE IG L  L  L+L  N++ +
Sbjct: 138 LQELYLRDNQLTTLPTE-IGQLKNLQRLQLWNNQLMTLPEEIGQLKNLQTLNLGYNQLTA 196

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E Y+G+N L+ALP E+G+L KL  L L +N+L     E  QL+ L  L
Sbjct: 197 LPNEIGQLQNLQELYLGSNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDL 256

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +N L+ LP EIG++  L+ L L  N L TL   +                       
Sbjct: 257 YLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDI----------------------- 293

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        K L L    L+  P EI +   +  LDL  N +  LP E+ 
Sbjct: 294 -----EQLQNL--------KSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIG 340

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
              +LQ   L+ N++   P  I   L +L  L L +N L
Sbjct: 341 QLKNLQVFELNNNQLTTLPKEI-GQLQNLQELYLIDNQL 378


>gi|124008815|ref|ZP_01693503.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123985606|gb|EAY25491.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 614

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 165/366 (45%), Gaps = 24/366 (6%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N L+ +P  +  L  L  L+L+QNR+  +P ++    +L    +G N     P    K
Sbjct: 101 SSNFLSTIPFGLTHLRNLKVLNLYQNRLGKLPDAVLNLRNLEVLNLGKNGFHRFPDHFDK 160

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L+ L +LDL  N L E   E   L  L  L++S N +  LPPE+G+++ L+ L +  N +
Sbjct: 161 LTSLKSLDLGDNFLTEIPPEVGNLTLLEELNVSVNQIKHLPPELGRLSALKWLKIQQNQI 220

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENE---------------DSEASTTKEDLITMATRL 194
             L  +         L+  R++  +                 D+E      ++  M T  
Sbjct: 221 VELPETFDQLENLEELRLERNKFTQFPAALLKLPKLKKLYIFDNEIEALPPEVSQMTTL- 279

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
               + L + G  L ++PSEI    ++    L  N I ELPPE+S   +L+ L L  NK+
Sbjct: 280 ----EHLQMSGNQLKSLPSEIGSLPQLKIAYLEYNEIAELPPEISQLENLEYLSLEHNKL 335

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 314
              P   L  L  L  L L +N L ++P+     +  L+ LD+  N   L     F SL 
Sbjct: 336 TGLPQG-LEKLEKLEFLHLHHNNLTELPA-SIAQMKGLKELDVRNN-EGLDLANVFKSLE 392

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           H++ ++++  Q    P D    Q L  L L Q  L  +P+  +    LT+L + DN ++ 
Sbjct: 393 HIETVHVQAKQFSSIPVDADHWQYLPFLTLDQQGLTQLPKALEQTVLLTDLSMGDNELTT 452

Query: 375 LPPELG 380
           LP  LG
Sbjct: 453 LPETLG 458



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 154/356 (43%), Gaps = 40/356 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           ++  T L  L  S N L  +P  IGSL +L    L  N I  +P  IS   +L    + +
Sbjct: 273 VSQMTTLEHLQMSGNQLKSLPSEIGSLPQLKIAYLEYNEIAELPPEISQLENLEYLSLEH 332

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP  L KL KL  L LH N L E      Q++ L  LD+ NN    L      + 
Sbjct: 333 NKLTGLPQGLEKLEKLEFLHLHHNNLTELPASIAQMKGLKELDVRNNEGLDLANVFKSLE 392

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            +  + +     +   S  V+      L +L        D +  T     +  A   +V 
Sbjct: 393 HIETVHVQA---KQFSSIPVDADHWQYLPFLTL------DQQGLTQ----LPKALEQTVL 439

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             +LS+    L+ +P  +    ++ + ++ +N + +LP  L +C +++ L +  N + + 
Sbjct: 440 LTDLSMGDNELTTLPETLGNLVKLERFNVQKNKLGKLPDALGNCKAMKWLHVGSNALTEL 499

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P  ++  L  L  + LDNN L  +P +  KD+  L +++L+ N                 
Sbjct: 500 P-TVIGELEDLQEVYLDNNQLMALPKE-IKDLKKLMVVNLANN----------------- 540

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
                  QL   PT+I  +  ++ L L+ N L  +PEG +N   L EL+L  N +S
Sbjct: 541 -------QLTTLPTEITEIPYIQYLYLNNNQLTDLPEGIENWVVLQELNLKGNPMS 589



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 157/358 (43%), Gaps = 50/358 (13%)

Query: 56  NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 115
           N I ++P  +S   +L    M  N L +LP+E+G L +L    L  N++ E   E  QL 
Sbjct: 264 NEIEALPPEVSQMTTLEHLQMSGNQLKSLPSEIGSLPQLKIAYLEYNEIAELPPEISQLE 323

Query: 116 -LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
            L  L L +N L+GLP  + K+  L  L L  N L  L +S+        LK L  R   
Sbjct: 324 NLEYLSLEHNKLTGLPQGLEKLEKLEFLHLHHNNLTELPASIAQMKG---LKELDVR--N 378

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELS----------------LEGMNLSAIPSEIWEA 218
           NE  + +   + L  + T + V +K+ S                L+   L+ +P  + + 
Sbjct: 379 NEGLDLANVFKSLEHIET-VHVQAKQFSSIPVDADHWQYLPFLTLDQQGLTQLPKALEQT 437

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
             +T L +  N +  LP  L +   L+   + +NK+   PDA L +  ++  L + +N L
Sbjct: 438 VLLTDLSMGDNELTTLPETLGNLVKLERFNVQKNKLGKLPDA-LGNCKAMKWLHVGSNAL 496

Query: 279 RQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
            ++P+                             L  LQE+YL   QL   P +I  L++
Sbjct: 497 TELPT-------------------------VIGELEDLQEVYLDNNQLMALPKEIKDLKK 531

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           L +++L+ N L ++P     +  +  L L++N ++ LP  +      LQ L L GNP+
Sbjct: 532 LMVVNLANNQLTTLPTEITEIPYIQYLYLNNNQLTDLPEGIENW-VVLQELNLKGNPM 588



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 175/387 (45%), Gaps = 24/387 (6%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T L  L    N L  +P  +G+L+ L  L++  N+I  +P  +    +L    +  N + 
Sbjct: 162 TSLKSLDLGDNFLTEIPPEVGNLTLLEELNVSVNQIKHLPPELGRLSALKWLKIQQNQIV 221

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD-LSNNSLSGLPPEIGKMTTLRK 141
            LP    +L  L  L L  N+  ++     +L       + +N +  LPPE+ +MTTL  
Sbjct: 222 ELPETFDQLENLEELRLERNKFTQFPAALLKLPKLKKLYIFDNEIEALPPEVSQMTTLEH 281

Query: 142 LLLTGNPLRTLRSSLVNGPTPAL-LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 200
           L ++GN L++L S +  G  P L + YL      NE +E       L  +          
Sbjct: 282 LQMSGNQLKSLPSEI--GSLPQLKIAYLEY----NEIAELPPEISQLENLEY-------- 327

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           LSLE   L+ +P  + +  ++  L L  N++ ELP  ++    L+ L +  N+  D  + 
Sbjct: 328 LSLEHNKLTGLPQGLEKLEKLEFLHLHHNNLTELPASIAQMKGLKELDVRNNEGLDLAN- 386

Query: 261 ILTSLSSLSCLKLDNNPLRQVP--SDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 318
           +  SL  +  + +       +P  +D ++ +P L  LD    +  LP+    + L  L +
Sbjct: 387 VFKSLEHIETVHVQAKQFSSIPVDADHWQYLPFL-TLD-QQGLTQLPKALEQTVL--LTD 442

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L +   +L   P  +  L +L   ++ +N L  +P+   N  ++  L +  N ++ LP  
Sbjct: 443 LSMGDNELTTLPETLGNLVKLERFNVQKNKLGKLPDALGNCKAMKWLHVGSNALTELPTV 502

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTILD 405
           +G LE  LQ + LD N L ++ + I D
Sbjct: 503 IGELE-DLQEVYLDNNQLMALPKEIKD 528



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 9/127 (7%)

Query: 292 LQILDLSYNIASLPENPPF--SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
           L+ ++LS N  S     PF  + L +L+ L L + +L + P  +L L+ L +L+L +N  
Sbjct: 95  LEKINLSSNFLS---TIPFGLTHLRNLKVLNLYQNRLGKLPDAVLNLRNLEVLNLGKNGF 151

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTK 409
              P+ F  LTSL  LDL DN ++ +PPE+G L   L+ L +  N ++ +   +   G  
Sbjct: 152 HRFPDHFDKLTSLKSLDLGDNFLTEIPPEVGNL-TLLEELNVSVNQIKHLPPEL---GRL 207

Query: 410 AVLKYLK 416
           + LK+LK
Sbjct: 208 SALKWLK 214


>gi|45551891|ref|NP_731852.2| flyers-cup, isoform A [Drosophila melanogaster]
 gi|45446477|gb|AAF54977.3| flyers-cup, isoform A [Drosophila melanogaster]
          Length = 693

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 191/420 (45%), Gaps = 61/420 (14%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP-AELGK 90
            N L  +PE +G L +L  L L  N IL +P    G  +L E +  NN +  +P A    
Sbjct: 303 HNDLTSLPEDMGLLRKLDCLYLQHNDILELPE-FEGNEALNELHASNNFIKIIPKAMCSN 361

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL  N++ E   E C LR     D+SNN++S LP  +  +  L  L + GNP+
Sbjct: 362 LPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPI 421

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT------------ 197
           +T+R  ++   T  +LK L  R       E      D  + +  +SVT            
Sbjct: 422 KTIRRDILQCGTTRILKTLHDRAVAKAKEEGGGV--DDASTSAGISVTRLRGGQMDDGDI 479

Query: 198 ------------SKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCA 242
                       ++ L++    L+++P ++++      +  +D +RN +  LP  L    
Sbjct: 480 PGNFPDRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMK 539

Query: 243 SLQT-LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
            L T L+LS N I   P  I +  + +S L L NN L  +P++                 
Sbjct: 540 DLVTELVLSNNVIGYVPQFI-SQFTRISFLNLSNNLLNDLPTE----------------- 581

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLT 360
                   F  L  L+EL +   +    P  +  LQ L IL  S+N ++ +   G +N+ 
Sbjct: 582 --------FGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHIKMLNVSGLQNMR 633

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            L+ LDL +N+I  +PP LG L  ++  L L GNP R  R  IL +GT A++ YL+D+IP
Sbjct: 634 RLSTLDLRNNDIETVPPILGNLT-NITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRIP 692



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 157/326 (48%), Gaps = 41/326 (12%)

Query: 94  LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L  LDL SN L     +   L+ L+VL L +N+L  LPPEIGK+  L +L ++ N L  L
Sbjct: 158 LNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQL 217

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
             ++ + P    L++L   +  NE  E +    DL  +        + L     N+ ++P
Sbjct: 218 PRAMYSLPE---LRHLN--ISYNEFVELNPDISDLHML--------EFLDGGHNNIQSLP 264

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
             I     +T L L  N I+ELPP+L +  SLQ + L  N +   P+  +  L  L CL 
Sbjct: 265 GGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPED-MGLLRKLDCLY 323

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
           L +N + ++P   F+    L  L  S N   +      S+LPHL+               
Sbjct: 324 LQHNDILELPE--FEGNEALNELHASNNFIKIIPKAMCSNLPHLK--------------- 366

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
                   ILDL  N +  +P+    L +L  LD+S+N IS LP  L  L   L +L+++
Sbjct: 367 --------ILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSL-AHLISLQVE 417

Query: 393 GNPLRSIRRTILDRGTKAVLKYLKDK 418
           GNP+++IRR IL  GT  +LK L D+
Sbjct: 418 GNPIKTIRRDILQCGTTRILKTLHDR 443



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 2/172 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D   N+L+ L N L     ++TEL+ S N++  +P+ I   +R+  L+L  N +  +P+
Sbjct: 521 VDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPT 580

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDL 121
                 +L E  + NN    +P  + +L  L  L    N +K   V   Q   RLS LDL
Sbjct: 581 EFGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDL 640

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            NN +  +PP +G +T +  L L GNP R  R  ++   T A++ YLR R+P
Sbjct: 641 RNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRIP 692



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 182/420 (43%), Gaps = 65/420 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N LT +S   I +   LT L    N L  +P  IG L +L+RL++  N++  
Sbjct: 158 LNNLDLSSNTLTHISPK-IENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQ 216

Query: 61  IPSSISGC-------CSLAEF----------YM------GNNALSALPAELGKLSKLGTL 97
           +P ++           S  EF          +M      G+N + +LP  +G L +L  L
Sbjct: 217 LPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTAL 276

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            L  N +KE   +   +R L  +DL +N L+ LP ++G +  L  L L  N +       
Sbjct: 277 LLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLDCLYLQHNDIL------ 330

Query: 157 VNGPTPALLKYLRSRLPENEDSEAST---TKEDLITMATRLSVTS----KELSLEGMNLS 209
                          LPE E +EA        + I +  +   ++    K L L    ++
Sbjct: 331 --------------ELPEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKIT 376

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P E+     + +LD+S N+I  LP  LSS A L +L +  N IK     IL   ++  
Sbjct: 377 ELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRI 436

Query: 270 CLKLDNNPLRQVPSDGF--------KDIPMLQILDLSYNIASLPEN-PPFSSLPHLQELY 320
              L +  + +   +G           I + ++     +   +P N P    L H + L 
Sbjct: 437 LKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTLA 496

Query: 321 LRRMQLREAPTDILRL---QQLRILDLSQNSLQSIPEGFKNLTSL-TELDLSDNNISALP 376
           +   +L   P  + ++   + + ++D ++N L ++P G +++  L TEL LS+N I  +P
Sbjct: 497 VNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVP 556



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 28/202 (13%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           SK ++LE + +       W    +  LDLS N++  + P++ +  SL  L L  N + + 
Sbjct: 136 SKAVNLEQLTIKE-EDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVEL 194

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P  I   L  L  L + +N L Q+P   +  +P L+ L++SYN                 
Sbjct: 195 PPEI-GKLEKLVRLNVSHNKLSQLPRAMYS-LPELRHLNISYN----------------- 235

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
                  +  E   DI  L  L  LD   N++QS+P G   L  LT L L  N+I  LPP
Sbjct: 236 -------EFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPP 288

Query: 378 ELGLLEPSLQALRLDGNPLRSI 399
           +L  +  SLQ + L  N L S+
Sbjct: 289 DLVNMR-SLQKIDLMHNDLTSL 309


>gi|443734386|gb|ELU18388.1| hypothetical protein CAPTEDRAFT_137734 [Capitella teleta]
          Length = 725

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 193/422 (45%), Gaps = 69/422 (16%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS----- 82
           LI   N L+ +P  +G L +L  LDL  N +  +P  ISG   L +  + NN L+     
Sbjct: 60  LILQSNKLHEIPSVLGVLQKLQLLDLSDNFLTELPVEISGLRRLTQLVLNNNKLTEIAPQ 119

Query: 83  ------------------ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 123
                              +P+ + KL  L  L L  N+L    VE C +  L  L +S 
Sbjct: 120 IIDLTQLEVLGLNGNNIHEIPSAISKLQNLQVLALECNELDFLSVEVCHIHGLQKLQVSG 179

Query: 124 NSLSGLPP-----------------------EIGKMTTLRKLLLTGNPLRTLRSSLVNGP 160
           N+++ LP                        +I  + +L++L L+ N ++ L+     GP
Sbjct: 180 NNITNLPYGIENLVCLQQLLLDDNDLDFIPIQIFWLESLQELALSSNKIKALQ-----GP 234

Query: 161 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 220
             A LK L+  L  N +       E  I     L +    L LEG ++S IP EI     
Sbjct: 235 EMAKLKNLKI-LGLNNNFIVEIPGE--IGQMEMLEI----LGLEGNSISVIPVEIGNLAN 287

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD--AILTSLSSLSCLKLDNNPL 278
           + +L L  N ++ LP ELS C ++  L L++N + D P    ILT + SLS   L++N +
Sbjct: 288 LEELYLGNNCLESLPEELSLCCAMNILNLAKNHLCDVPVELKILTQMISLS---LEDNDI 344

Query: 279 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
            ++PS     +  L++L+L  N ++SLP +   ++L +LQ + L R      P  + +L 
Sbjct: 345 SELPS-CVCALAELEVLNLDGNSLSSLPND--IANLENLQHVTLSRNSFGTFPMPLTQLS 401

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
            +  L +  NS+  +PE F NL +L   ++S N +   P +L  + P L+ + L  N L 
Sbjct: 402 TIETLRMCHNSIAQLPEEFTNLQNLKLFEMSHNVMQEFPVQLCFI-PGLETVNLANNKLE 460

Query: 398 SI 399
           S+
Sbjct: 461 SV 462



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 173/359 (48%), Gaps = 16/359 (4%)

Query: 57  RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-CVEACQLR 115
            + SI   I  C +L    + +N ++++P ELG L  L  L L SN+L E   V     +
Sbjct: 20  HLTSISPKIVDCETLNCLILASNEITSIPVELGNLINLEILILQSNKLHEIPSVLGVLQK 79

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV----------NGPTPALL 165
           L +LDLS+N L+ LP EI  +  L +L+L  N L  +   ++          NG     +
Sbjct: 80  LQLLDLSDNFLTELPVEISGLRRLTQLVLNNNKLTEIAPQIIDLTQLEVLGLNGNNIHEI 139

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
               S+L   +       + D +++        ++L + G N++ +P  I     + +L 
Sbjct: 140 PSAISKLQNLQVLALECNELDFLSVEVCHIHGLQKLQVSGNNITNLPYGIENLVCLQQLL 199

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           L  N +  +P ++    SLQ L LS NKIK      +  L +L  L L+NN + ++P + 
Sbjct: 200 LDDNDLDFIPIQIFWLESLQELALSSNKIKALQGPEMAKLKNLKILGLNNNFIVEIPGE- 258

Query: 286 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
              + ML+IL L  N I+ +P      +L +L+ELYL    L   P ++     + IL+L
Sbjct: 259 IGQMEMLEILGLEGNSISVIP--VEIGNLANLEELYLGNNCLESLPEELSLCCAMNILNL 316

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           ++N L  +P   K LT +  L L DN+IS LP  +  L   L+ L LDGN L S+   I
Sbjct: 317 AKNHLCDVPVELKILTQMISLSLEDNDISELPSCVCAL-AELEVLNLDGNSLSSLPNDI 374



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 182/406 (44%), Gaps = 30/406 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  NK+  L    +A    L  L  + N +  +P  IG +  L  L L  N I  
Sbjct: 218 LQELALSSNKIKALQGPEMAKLKNLKILGLNNNFIVEIPGEIGQMEMLEILGLEGNSISV 277

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  I    +L E Y+GNN L +LP EL     +  L+L  N L +  VE   L ++  L
Sbjct: 278 IPVEIGNLANLEELYLGNNCLESLPEELSLCCAMNILNLAKNHLCDVPVELKILTQMISL 337

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +N +S LP  +  +  L  L L GN L +L + + N      L+ L+          
Sbjct: 338 SLEDNDISELPSCVCALAELEVLNLDGNSLSSLPNDIAN------LENLQ---------H 382

Query: 180 ASTTKEDLITMA---TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            + ++    T     T+LS T + L +   +++ +P E      +   ++S N +QE P 
Sbjct: 383 VTLSRNSFGTFPMPLTQLS-TIETLRMCHNSIAQLPEEFTNLQNLKLFEMSHNVMQEFPV 441

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           +L     L+T+ L+ NK++     +   L+ L+ L + NN    +P +    IP ++ L 
Sbjct: 442 QLCFIPGLETVNLANNKLESVAVEV-NKLNKLTELDISNNNFDSLPLE-VCSIPKIEKLI 499

Query: 297 LSYN----IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
           LS      + ++PE        H   L+L    +RE P  + +   L  L +S N L S+
Sbjct: 500 LSQEEGLRLKNIPEEFARCRAEH---LHLDYNDIRELPAFLAKSNNLTSLTMSHNRLTSL 556

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           P+       L    ++DN I+ LP   G +   L  LRL  NPL++
Sbjct: 557 PDEICKSQKLRTFHVNDNQITKLPEMFGKMH-HLTDLRLHDNPLKN 601



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 9/179 (5%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           LSL G +L++I  +I +   +  L L+ N I  +P EL +  +L+ LIL  NK+ + P +
Sbjct: 14  LSLIGKHLTSISPKIVDCETLNCLILASNEITSIPVELGNLINLEILILQSNKLHEIP-S 72

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYNIASLPE-NPPFSSLPHLQ 317
           +L  L  L  L L +N L ++P +  G +     ++  L  N   L E  P    L  L+
Sbjct: 73  VLGVLQKLQLLDLSDNFLTELPVEISGLR-----RLTQLVLNNNKLTEIAPQIIDLTQLE 127

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
            L L    + E P+ I +LQ L++L L  N L  +     ++  L +L +S NNI+ LP
Sbjct: 128 VLGLNGNNIHEIPSAISKLQNLQVLALECNELDFLSVEVCHIHGLQKLQVSGNNITNLP 186


>gi|421118980|ref|ZP_15579307.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348320|gb|EKO99146.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 377

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 164/350 (46%), Gaps = 43/350 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L VLDLSNN L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 111 IEQLKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI------------- 157

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 158 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 195 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 252

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L+ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L LS N 
Sbjct: 253 KNLKSLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 310

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L  +P+    L +L  L L  N ++ LP E+  L+ +LQ L L+ N   S
Sbjct: 311 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK-NLQTLYLNNNQFSS 359



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 164/345 (47%), Gaps = 40/345 (11%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+  L  +P  IG L  L RL LH N++  +P  I    +L   Y+ +N L+ LP E+ +
Sbjct: 54  SRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQ 113

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL +NQL     E  QL+ L +L L +N L+ L  +I ++  L+ L L+ N L
Sbjct: 114 LKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQL 173

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
            TL + +        LK L+S L  +E+  A+  KE  I     L V    L L    ++
Sbjct: 174 TTLPNEIEQ------LKNLKS-LYLSENQFATFPKE--IGQLQNLKV----LFLNNNQIT 220

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P+EI +  ++  L LS N +  LP E+    +L++L LS N++   P  +   L +L 
Sbjct: 221 ILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEV-GQLENLQ 279

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 329
            L L NN L+ +P +                            L +LQ L+L   QL   
Sbjct: 280 TLDLRNNQLKTLPKE-------------------------IEQLKNLQTLFLSNNQLTIL 314

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           P +I +L+ L  L L  N L ++P   + L +L  L L++N  S+
Sbjct: 315 PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 359



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 139/310 (44%), Gaps = 19/310 (6%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L  L    N L  +P+ I  L  L  L L  NR+ ++P  I    +L    + N
Sbjct: 65  IGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLSN 124

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP E+ +L  L  L LHSN+L     +  QL+ L  LDLSNN L+ LP EI ++ 
Sbjct: 125 NQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 184

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L+ L L+ N   T    +        L+ L+     N      T   + I    +L   
Sbjct: 185 NLKSLYLSENQFATFPKEI------GQLQNLKVLFLNNNQ---ITILPNEIAKLKKLQY- 234

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L L    L  +P EI +   +  LDLS N +  LP E+    +LQTL L  N++K  
Sbjct: 235 ---LYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTL 291

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P  I   L +L  L L NN L  +P +  K +  L  L L YN + +LP       L +L
Sbjct: 292 PKEI-EQLKNLQTLFLSNNQLTILPQEIGK-LKNLLWLSLVYNQLTTLPN--EIEQLKNL 347

Query: 317 QELYLRRMQL 326
           Q LYL   Q 
Sbjct: 348 QTLYLNNNQF 357



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 138/291 (47%), Gaps = 42/291 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS   L  LP EIGK+  L++L L  N L  L   +       LL YLRS   
Sbjct: 46  LEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL-YLRSN-- 102

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                             L+ +P EI +   +  LDLS N +  
Sbjct: 103 ---------------------------------RLTTLPKEIEQLKNLQVLDLSNNQLTV 129

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQ L L  N++      I   L +L  L L NN L  +P++  + +  L+
Sbjct: 130 LPQEIEQLKNLQLLYLHSNRLTTLSKDI-EQLQNLKSLDLSNNQLTTLPNE-IEQLKNLK 187

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L LS N  A+ P+      L +L+ L+L   Q+   P +I +L++L+ L LS N L ++
Sbjct: 188 SLYLSENQFATFPK--EIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITL 245

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P+  + L +L  LDLS N ++ LP E+G LE +LQ L L  N L+++ + I
Sbjct: 246 PKEIEQLKNLKSLDLSYNQLTILPKEVGQLE-NLQTLDLRNNQLKTLPKEI 295



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 83/176 (47%), Gaps = 25/176 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  
Sbjct: 163 LKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI 221

Query: 61  IPSSISGCCSLAEFYMGNNAL-----------------------SALPAELGKLSKLGTL 97
           +P+ I+    L   Y+ +N L                       + LP E+G+L  L TL
Sbjct: 222 LPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTL 281

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           DL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  L L  N L TL
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTL 337



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L  L    I     L  L  S N L  +P+ IG L  L+ L L  N++ +
Sbjct: 278 LQTLDLRNNQLKTLPKE-IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTT 336

Query: 61  IPSSISGCCSLAEFYMGNNALSA 83
           +P+ I    +L   Y+ NN  S+
Sbjct: 337 LPNEIEQLKNLQTLYLNNNQFSS 359


>gi|256090463|ref|XP_002581209.1| cell polarity protein; leucine-rich repeat protein; scribble
           complex protein [Schistosoma mansoni]
          Length = 1456

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 130/382 (34%), Positives = 184/382 (48%), Gaps = 49/382 (12%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           L  S N L  +P  IGS S L+ LD+ +N I  +P+SI  C SL    + NN L +LPA 
Sbjct: 73  LTLSDNELTRLPTGIGSFSNLVELDISRNDISELPASIRFCDSLQSLDVSNNPLQSLPAG 132

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 146
                                   CQLR L VL L++ S++ LP EIG +  L KL L  
Sbjct: 133 F-----------------------CQLRNLRVLCLNDISIAELPEEIGSLQLLEKLELRD 169

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
           N L+++  S  +     L+      L  NE  E S     +I   ++LS    EL ++  
Sbjct: 170 NCLKSIPDSFAD-----LIHLEFLDLGANEFQELSP----VIGQLSQLS----ELWIDDN 216

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            L ++P E+   G + +LDLS N I  LP  +S   SL  L LS+N I   P+  L  L 
Sbjct: 217 ELRSLPKELGNLGNLQQLDLSENLISTLPESISGLVSLSDLNLSQNSITHLPNG-LGDLD 275

Query: 267 SLSCLKLDNNPLRQV-PSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHLQELYLRRM 324
            L  LKL+ N L  V P+ G  +   LQ L L+ N  S LP +    +L  +  L + + 
Sbjct: 276 KLIILKLNQNRLLTVTPTIG--NCSSLQELYLTENFLSKLPSS--IGNLVSMFHLNVDQN 331

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
           QL E P++I +   L IL L +N+L  +P+   N T L  LD+S N +  LP    L   
Sbjct: 332 QLTELPSEIGQCTSLNILSLRENNLHRLPDEIGNCTRLRVLDVSGNRLDRLP--FSLSRC 389

Query: 385 SLQALRLDGN---PLRSIRRTI 403
           SL AL L  N   P+ +++R +
Sbjct: 390 SLTALWLSQNQSQPVITLQRDV 411



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 90/157 (57%), Gaps = 2/157 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N ++ L  + I+    L++L  S+N +  +P  +G L +LI L L+QNR+L+
Sbjct: 231 LQQLDLSENLISTLPES-ISGLVSLSDLNLSQNSITHLPNGLGDLDKLIILKLNQNRLLT 289

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +  +I  C SL E Y+  N LS LP+ +G L  +  L++  NQL E   E  Q   L++L
Sbjct: 290 VTPTIGNCSSLQELYLTENFLSKLPSSIGNLVSMFHLNVDQNQLTELPSEIGQCTSLNIL 349

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            L  N+L  LP EIG  T LR L ++GN L  L  SL
Sbjct: 350 SLRENNLHRLPDEIGNCTRLRVLDVSGNRLDRLPFSL 386



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 124/250 (49%), Gaps = 37/250 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+   LS  +I   + L+EL    N L  +P+ +G+L  L +LDL +N I ++P 
Sbjct: 188 LDLGANEFQELSP-VIGQLSQLSELWIDDNELRSLPKELGNLGNLQQLDLSENLISTLPE 246

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
           SISG  SL++  +  N+++ LP  LG L KL  L L+ N+L           L+V     
Sbjct: 247 SISGLVSLSDLNLSQNSITHLPNGLGDLDKLIILKLNQNRL-----------LTVT---- 291

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
                  P IG  ++L++L LT N L  L SS+ N     L+      + +N+ +E  + 
Sbjct: 292 -------PTIGNCSSLQELYLTENFLSKLPSSIGN-----LVSMFHLNVDQNQLTELPSE 339

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
               I   T L++    LSL   NL  +P EI     +  LD+S N +  LP  LS C S
Sbjct: 340 ----IGQCTSLNI----LSLRENNLHRLPDEIGNCTRLRVLDVSGNRLDRLPFSLSRC-S 390

Query: 244 LQTLILSRNK 253
           L  L LS+N+
Sbjct: 391 LTALWLSQNQ 400


>gi|418727702|ref|ZP_13286290.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959060|gb|EKO22837.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 378

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 161/376 (42%), Gaps = 85/376 (22%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           LI S+  L  +PE IG L  L  L+L  N+++ +P  I    +L E ++  N     P E
Sbjct: 52  LILSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKE 111

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 147
           + +L       LH                  L LSNN L+ LP EIG++  L++L L  N
Sbjct: 112 IEQLK-----SLHK-----------------LYLSNNQLTILPVEIGQLQNLQELNLWNN 149

Query: 148 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 207
            L+T+   +                            E L  +        ++L L+   
Sbjct: 150 QLKTISKEI----------------------------EQLKNL--------QKLYLDNNQ 173

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+A P EI +   +  L LS N +   P E+    +LQ L LS N++  +P  I   L  
Sbjct: 174 LTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI-GKLQK 232

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L  L L +N L  +P++                            L  LQEL L   QL 
Sbjct: 233 LQWLGLGDNQLTTIPNE-------------------------IGKLQKLQELNLDVNQLT 267

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
             P +I +LQ L++L LS N  ++IP  F  L +L  L L  N ++ALP E+G L+ +L+
Sbjct: 268 TIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLK-NLK 326

Query: 388 ALRLDGNPLRSIRRTI 403
            L LD N L +I + I
Sbjct: 327 MLNLDANQLITIPKEI 342



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 142/300 (47%), Gaps = 23/300 (7%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N L  +P+ I  L  L  L L+ N+  + P  I    SL + Y+ NN L+ LP E+G+
Sbjct: 78  SDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQ 137

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  L+L +NQLK    E  QL+ L  L L NN L+  P EIGK+  L+ L L+ N L
Sbjct: 138 LQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQL 197

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMN 207
            T    +  G    L              E   +   L T    +    K   L L    
Sbjct: 198 TTFPKEI--GKLQNL-------------QELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQ 242

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+ IP+EI +  ++ +L+L  N +  +P E+    +LQ L LS N+ K  P      L +
Sbjct: 243 LTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIP-VEFGQLKN 301

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L LD N L  +P +  K +  L++L+L  N + ++P+      L +LQ LYLR  Q 
Sbjct: 302 LKMLSLDANQLTALPKEIGK-LKNLKMLNLDANQLITIPK--EIGQLQNLQTLYLRNNQF 358



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 129/289 (44%), Gaps = 39/289 (13%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  S N L  +P  IG L  L  L+L  N++ +I   I    +L + Y+ N
Sbjct: 112 IEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDN 171

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+A P E+GKL  L +L L +NQL  +  E  +L+ L  L LSNN L+  P EIGK+ 
Sbjct: 172 NQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQ 231

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L+ L L  N L T+ + +  G    L                                 
Sbjct: 232 KLQWLGLGDNQLTTIPNEI--GKLQKL--------------------------------- 256

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL+L+   L+ IP EI +   +  L LS N  + +P E     +L+ L L  N++   
Sbjct: 257 -QELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTAL 315

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 306
           P  I   L +L  L LD N L  +P +    +  LQ L L  N  S+ E
Sbjct: 316 PKEI-GKLKNLKMLNLDANQLITIPKE-IGQLQNLQTLYLRNNQFSIEE 362



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 114/255 (44%), Gaps = 38/255 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  N+L  +S   I     L +L    N L   P+ IG L  L  L L  N++ +
Sbjct: 141 LQELNLWNNQLKTISKE-IEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTT 199

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
            P  I    +L E Y+ NN L+  P E+GKL KL  L L  NQL     E  +L +L  L
Sbjct: 200 FPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQEL 259

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L  N L+ +P EIG++  L+ L L+ N  +T+         P     L++         
Sbjct: 260 NLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTI---------PVEFGQLKNL-------- 302

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              K LSL+   L+A+P EI +   +  L+L  N +  +P E+ 
Sbjct: 303 -------------------KMLSLDANQLTALPKEIGKLKNLKMLNLDANQLITIPKEIG 343

Query: 240 SCASLQTLILSRNKI 254
              +LQTL L  N+ 
Sbjct: 344 QLQNLQTLYLRNNQF 358



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 109/212 (51%), Gaps = 4/212 (1%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L    L A+P +I +   +  L+LS N +  LP E+    +LQ L
Sbjct: 39  LTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQEL 98

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 307
            L+ N+ K +P  I   L SL  L L NN L  +P +    +  LQ L+L +N      +
Sbjct: 99  FLNYNQFKTFPKEI-EQLKSLHKLYLSNNQLTILPVE-IGQLQNLQELNL-WNNQLKTIS 155

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                L +LQ+LYL   QL   P +I +LQ L+ L LS N L + P+    L +L EL L
Sbjct: 156 KEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYL 215

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           S+N ++  P E+G L+  LQ L L  N L +I
Sbjct: 216 SNNQLTTFPKEIGKLQ-KLQWLGLGDNQLTTI 246


>gi|258545585|ref|ZP_05705819.1| small GTP-binding protein [Cardiobacterium hominis ATCC 15826]
 gi|258519285|gb|EEV88144.1| small GTP-binding protein [Cardiobacterium hominis ATCC 15826]
          Length = 430

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 164/344 (47%), Gaps = 19/344 (5%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +PET+G L+ L  LDL  N + S+P+SI     L    +  N L  LP    KL+ L
Sbjct: 64  LQSLPETLGELALLTELDLRGNELKSLPASIGDLSLLRRLDLKWNQLETLPDSFAKLTGL 123

Query: 95  GTLDLHSNQLKEYC-VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L+L  N++     V      ++ LDLS+N L  +P  +G  T L KL L  N L  L 
Sbjct: 124 TKLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPLFLGNFTRLTKLNLARNKLENLP 183

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
               N     L +  R  L  NE  +      D I   ++LS    EL + G  L ++P 
Sbjct: 184 PVCAN-----LTQLTRLNLSGNELKQLP----DFIANFSQLS----ELEISGNQLGSLPE 230

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
            I    E+  LD+S N +  LP  L    +L  L +  N++   P A   +L  L  L L
Sbjct: 231 YIGRLKELHHLDISGNMLTTLPETLGDLQNLSILDIHNNRLTSLP-ANFGNLGQLHRLSL 289

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPF-SSLPHLQELYLRRMQLREAPTD 332
            +N L  +P    + +  L +LDLS+N   L + P F     HL +L+L   +L E P D
Sbjct: 290 AHNQLSLLPPPAAQ-MQRLAVLDLSHN--RLMQLPNFICQFSHLNDLHLGYNELTELPDD 346

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           I  L +L +L+++ N++ ++P    NLT +T LDLS   I  LP
Sbjct: 347 IGLLTELEVLNIAHNNIGALPPSVANLTKMTRLDLSSTQIPYLP 390



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 125/256 (48%), Gaps = 38/256 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L++ GN+L  L +  IA+++ L+EL  S N L  +PE IG L  L  LD+  N + +
Sbjct: 192 LTRLNLSGNELKQLPD-FIANFSQLSELEISGNQLGSLPEYIGRLKELHHLDISGNMLTT 250

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P ++    +L+   + NN L++LPA  G L +L  L L  NQL      A Q+ RL+VL
Sbjct: 251 LPETLGDLQNLSILDIHNNRLTSLPANFGNLGQLHRLSLAHNQLSLLPPPAAQMQRLAVL 310

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DLS+N L  LP  I + + L  L L  N L                    + LP++    
Sbjct: 311 DLSHNRLMQLPNFICQFSHLNDLHLGYNEL--------------------TELPDD---- 346

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                   I + T L V    L++   N+ A+P  +    ++T+LDLS   I  LP  +S
Sbjct: 347 --------IGLLTELEV----LNIAHNNIGALPPSVANLTKMTRLDLSSTQIPYLPKFIS 394

Query: 240 SCASLQTLILSRNKIK 255
           +   L  L +   ++K
Sbjct: 395 NLNRLCILDVRNTRMK 410



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 159/347 (45%), Gaps = 42/347 (12%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P     L  L RLDL   R+ S+P ++     L E  +  N L +LPA +G LS L  L
Sbjct: 44  IPREPSELIGLNRLDLSFRRLQSLPETLGELALLTELDLRGNELKSLPASIGDLSLLRRL 103

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL  NQL+       +L  L+ L+L  N ++ LP  +     + +L L+ N  R LR  L
Sbjct: 104 DLKWNQLETLPDSFAKLTGLTKLELGYNKMTSLPEVLTAFNHITELDLSDN--RLLRVPL 161

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
             G                                TRL+    +L+L    L  +P    
Sbjct: 162 FLGN------------------------------FTRLT----KLNLARNKLENLPPVCA 187

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
              ++T+L+LS N +++LP  +++ + L  L +S N++   P+ I   L  L  L +  N
Sbjct: 188 NLTQLTRLNLSGNELKQLPDFIANFSQLSELEISGNQLGSLPEYI-GRLKELHHLDISGN 246

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            L  +P +   D+  L ILD+  N + SLP N  F +L  L  L L   QL   P    +
Sbjct: 247 MLTTLP-ETLGDLQNLSILDIHNNRLTSLPAN--FGNLGQLHRLSLAHNQLSLLPPPAAQ 303

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
           +Q+L +LDLS N L  +P      + L +L L  N ++ LP ++GLL
Sbjct: 304 MQRLAVLDLSHNRLMQLPNFICQFSHLNDLHLGYNELTELPDDIGLL 350



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 136/280 (48%), Gaps = 16/280 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++LD+  N+L  +    + ++T LT+L  ++N L  +P    +L++L RL+L  N +  
Sbjct: 146 ITELDLSDNRLLRVPL-FLGNFTRLTKLNLARNKLENLPPVCANLTQLTRLNLSGNELKQ 204

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I+    L+E  +  N L +LP  +G+L +L  LD+  N L         L+ LS+L
Sbjct: 205 LPDFIANFSQLSELEISGNQLGSLPEYIGRLKELHHLDISGNMLTTLPETLGDLQNLSIL 264

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+ NN L+ LP   G +  L +L L  N L  L          A+L    +RL +     
Sbjct: 265 DIHNNRLTSLPANFGNLGQLHRLSLAHNQLSLLPPPAAQMQRLAVLDLSHNRLMQ----- 319

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                 + I   + L+    +L L    L+ +P +I    E+  L+++ N+I  LPP ++
Sbjct: 320 ----LPNFICQFSHLN----DLHLGYNELTELPDDIGLLTELEVLNIAHNNIGALPPSVA 371

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
           +   +  L LS  +I   P  I ++L+ L  L + N  ++
Sbjct: 372 NLTKMTRLDLSSTQIPYLPKFI-SNLNRLCILDVRNTRMK 410



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 10/245 (4%)

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
           +E +   ED I       +    L L    L ++P  + E   +T+LDL  N ++ LP  
Sbjct: 34  AEDNNIGEDRIPREPSELIGLNRLDLSFRRLQSLPETLGELALLTELDLRGNELKSLPAS 93

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS--DGFKDIPMLQIL 295
           +   + L+ L L  N+++  PD+    L+ L+ L+L  N +  +P     F  I     L
Sbjct: 94  IGDLSLLRRLDLKWNQLETLPDSF-AKLTGLTKLELGYNKMTSLPEVLTAFNHITE---L 149

Query: 296 DLSYNIASLPENPPF-SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           DLS N   L   P F  +   L +L L R +L   P     L QL  L+LS N L+ +P+
Sbjct: 150 DLSDN--RLLRVPLFLGNFTRLTKLNLARNKLENLPPVCANLTQLTRLNLSGNELKQLPD 207

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
              N + L+EL++S N + +LP  +G L+  L  L + GN L ++  T+ D    ++L  
Sbjct: 208 FIANFSQLSELEISGNQLGSLPEYIGRLK-ELHHLDISGNMLTTLPETLGDLQNLSILDI 266

Query: 415 LKDKI 419
             +++
Sbjct: 267 HNNRL 271


>gi|440802431|gb|ELR23360.1| protein phosphatase 2C domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 895

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 181/384 (47%), Gaps = 49/384 (12%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L +L   +N L  +P  I   + L  LDL  NRI   P+++    +LAE  +  N + + 
Sbjct: 147 LKKLYLFQNHLATIPAEIAEFTELQALDLKYNRIKEWPTALCSVTTLAELLLAGNRVRSF 206

Query: 85  PA--ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 141
           P   ++ KL+ L  LDL  N L+E+    C L  L+ L L  N L GL P IG +++L +
Sbjct: 207 PPADDMAKLAALKKLDLSQNGLREFPEALCSLPALADLALDRNYLEGLSPAIGHLSSLTR 266

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 201
           L +  N L++L   L +      L+YL                              +EL
Sbjct: 267 LSIKANSLKSLPEELCD------LEYL------------------------------QEL 290

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
            +    ++++P  + +   + KLD+S N+I  LP ++S   +LQ L   RNKI+  P++ 
Sbjct: 291 CIADNQVTSLPEGLGKLVNLQKLDISENAITALPADVSGLTALQKLNAKRNKIECIPESA 350

Query: 262 LTS----LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLPHL 316
             +      SL+ L L +N L    S        LQ+++L+ N   LPE P   S L +L
Sbjct: 351 TVTETGGFYSLTELNLAHNQLESW-SSALWTSEALQVVNLTAN--RLPEVPAEISYLYNL 407

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L+L   ++     ++ +L  L  L+LS N L+++P     L +L  L L  N +S   
Sbjct: 408 THLHLNANRITVVANELGQLAALDTLELSFNDLEAVPADLGYLAALRVLSLGYNRLSGEA 467

Query: 377 -PELGLLEPSLQALRLDGNPLRSI 399
            P+L  L  +L+ L L GNPL+ +
Sbjct: 468 LPDLSALS-ALEQLFLAGNPLQHV 490



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 181/423 (42%), Gaps = 43/423 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+  N L      L  S   L +L   +N L G+   IG LS L RL +  N + S
Sbjct: 218 LKKLDLSQNGLREFPEAL-CSLPALADLALDRNYLEGLSPAIGHLSSLTRLSIKANSLKS 276

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  +     L E  + +N +++LP  LGKL  L  LD+  N +     +   L  L  L
Sbjct: 277 LPEELCDLEYLQELCIADNQVTSLPEGLGKLVNLQKLDISENAITALPADVSGLTALQKL 336

Query: 120 DLSNNSLSGLPP-----EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           +   N +  +P      E G   +L +L L  N L +  S+L       ++    +RLPE
Sbjct: 337 NAKRNKIECIPESATVTETGGFYSLTELNLAHNQLESWSSALWTSEALQVVNLTANRLPE 396

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
                        +            L L    ++ + +E+ +   +  L+LS N ++ +
Sbjct: 397 -------------VPAEISYLYNLTHLHLNANRITVVANELGQLAALDTLELSFNDLEAV 443

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P +L   A+L+ L L  N++       L++LS+L  L L  NPL+ VP      +P L  
Sbjct: 444 PADLGYLAALRVLSLGYNRLSGEALPDLSALSALEQLFLAGNPLQHVPG-WVGSLPALSQ 502

Query: 295 LDLSY----NIASLPENPP---------------FSSLPHLQELYLRRMQLREAPTDILR 335
           L L      ++    EN P                  LP LQ L +   +L+  P  +  
Sbjct: 503 LHLHLVRPSSLLFTGENAPGHGLYLAELEELPEELCGLPSLQYLDVSGNKLKALPAKLPE 562

Query: 336 LQQLRILDLSQNSLQS--IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
           L  L+ L    N+L++  +P+G  +L  L E+DLS N +  +P  +  L+     L L G
Sbjct: 563 LSGLQRLIACHNALETEGVPDGVDDLRELEEIDLSYNQLKTVPESVHYLKDRAHIL-LQG 621

Query: 394 NPL 396
           NPL
Sbjct: 622 NPL 624



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 90/189 (47%), Gaps = 27/189 (14%)

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P EI     + KL L +N +  +P E++    LQ L L  N+IK+WP A L S+++L+ L
Sbjct: 138 PVEILGKKWLKKLYLFQNHLATIPAEIAEFTELQALDLKYNRIKEWPTA-LCSVTTLAEL 196

Query: 272 KLDNNPLRQVP-SDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 330
            L  N +R  P +D    +  L+ LDLS N                         LRE P
Sbjct: 197 LLAGNRVRSFPPADDMAKLAALKKLDLSQN------------------------GLREFP 232

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
             +  L  L  L L +N L+ +     +L+SLT L +  N++ +LP EL  LE  LQ L 
Sbjct: 233 EALCSLPALADLALDRNYLEGLSPAIGHLSSLTRLSIKANSLKSLPEELCDLE-YLQELC 291

Query: 391 LDGNPLRSI 399
           +  N + S+
Sbjct: 292 IADNQVTSL 300


>gi|124005686|ref|ZP_01690525.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988754|gb|EAY28360.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 439

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 164/349 (46%), Gaps = 37/349 (10%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +P     L  +I L L  N   + P  I    SL +  +G+  LS+LP+ +G+L 
Sbjct: 99  NNLTTLPTEFKLLQNVINLHLDHNPFSTFPDEIFSLASLQDLALGDTGLSSLPSGIGRLR 158

Query: 93  KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
           +L  LDL +NQL     +   L+ L  L+LS N  + LP E+  +  L  L ++ NP+ T
Sbjct: 159 RLQKLDLRNNQLAYLPTKITHLKNLRHLNLSGNQFTTLPKEVNSLKELVYLNISDNPITT 218

Query: 152 LR---SSLVNGPTPALLKYLRSRLP----ENEDSEA-STTKEDLITMATRLSVTS--KEL 201
           L    SSL N  + +L     + LP    E ++ E    +K  +  +   +      +EL
Sbjct: 219 LSLNPSSLQNLRSLSLGNNNLTELPPEIFELKNLEVLWLSKNQIKNLPPEIKKLKHLEEL 278

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
            L    LSA+P EI E  E+  L L +N + +LPPE+    +LQ L + +NK+   P+ I
Sbjct: 279 YLYSNQLSALPPEIGELKELFMLGLDKNQLSDLPPEIGQLKNLQGLYVPKNKLALLPNEI 338

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYL 321
           + +L  L  L+L +N L  +P + +K                           HL+ LYL
Sbjct: 339 V-NLKDLRELRLSDNQLTYLPEEKWKT-------------------------KHLKVLYL 372

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
              QL+  P  I  L+ L  L+LS N L+ +P    NL SL  LDL  N
Sbjct: 373 DSNQLKTLPIGICSLKNLETLNLSFNELEELPSEVSNLKSLRWLDLEGN 421



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 134/282 (47%), Gaps = 40/282 (14%)

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            L LS+  +  LPPE+G++  ++ + L GN L TL         P   K L++ +  + D
Sbjct: 70  TLGLSSKGVEYLPPEVGQLQQMKYIGLDGNNLTTL---------PTEFKLLQNVINLHLD 120

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
               +T  D I     L    ++L+L    LS++PS I     + KLDL  N +  LP +
Sbjct: 121 HNPFSTFPDEIFSLASL----QDLALGDTGLSSLPSGIGRLRRLQKLDLRNNQLAYLPTK 176

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           ++   +L+ L LS N+    P  +  SL  L  L + +NP                    
Sbjct: 177 ITHLKNLRHLNLSGNQFTTLPKEV-NSLKELVYLNISDNP-------------------- 215

Query: 298 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
              I +L  NP  SSL +L+ L L    L E P +I  L+ L +L LS+N ++++P   K
Sbjct: 216 ---ITTLSLNP--SSLQNLRSLSLGNNNLTELPPEIFELKNLEVLWLSKNQIKNLPPEIK 270

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            L  L EL L  N +SALPPE+G L+  L  L LD N L  +
Sbjct: 271 KLKHLEELYLYSNQLSALPPEIGELK-ELFMLGLDKNQLSDL 311



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 139/281 (49%), Gaps = 24/281 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+  N+L  L    I     L  L  S N    +P+ + SL  L+ L++  N I +
Sbjct: 160 LQKLDLRNNQLAYLPTK-ITHLKNLRHLNLSGNQFTTLPKEVNSLKELVYLNISDNPITT 218

Query: 61  I---PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 116
           +   PSS+    SL+   +GNN L+ LP E+ +L  L  L L  NQ+K    E  +L+ L
Sbjct: 219 LSLNPSSLQNLRSLS---LGNNNLTELPPEIFELKNLEVLWLSKNQIKNLPPEIKKLKHL 275

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPEN 175
             L L +N LS LPPEIG++  L  L L  N L  L       P    LK L+   +P+N
Sbjct: 276 EELYLYSNQLSALPPEIGELKELFMLGLDKNQLSDL------PPEIGQLKNLQGLYVPKN 329

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
              + +    +++ +        +EL L    L+ +P E W+   +  L L  N ++ LP
Sbjct: 330 ---KLALLPNEIVNLKDL-----RELRLSDNQLTYLPEEKWKTKHLKVLYLDSNQLKTLP 381

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
             + S  +L+TL LS N++++ P  + ++L SL  L L+ N
Sbjct: 382 IGICSLKNLETLNLSFNELEELPSEV-SNLKSLRWLDLEGN 421



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 164/360 (45%), Gaps = 52/360 (14%)

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-------------------- 115
           + +  +  LP E+G+L ++  + L  N L     E   L+                    
Sbjct: 73  LSSKGVEYLPPEVGQLQQMKYIGLDGNNLTTLPTEFKLLQNVINLHLDHNPFSTFPDEIF 132

Query: 116 ----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS- 170
               L  L L +  LS LP  IG++  L+KL L  N L  L + + +      LK LR  
Sbjct: 133 SLASLQDLALGDTGLSSLPSGIGRLRRLQKLDLRNNQLAYLPTKITH------LKNLRHL 186

Query: 171 RLPENEDS----EASTTKEDLITMATRLSVTS-----------KELSLEGMNLSAIPSEI 215
            L  N+ +    E ++ KE +    +   +T+           + LSL   NL+ +P EI
Sbjct: 187 NLSGNQFTTLPKEVNSLKELVYLNISDNPITTLSLNPSSLQNLRSLSLGNNNLTELPPEI 246

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
           +E   +  L LS+N I+ LPPE+     L+ L L  N++   P  I   L  L  L LD 
Sbjct: 247 FELKNLEVLWLSKNQIKNLPPEIKKLKHLEELYLYSNQLSALPPEI-GELKELFMLGLDK 305

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N L  +P +    +  LQ L +  N +A LP      +L  L+EL L   QL   P +  
Sbjct: 306 NQLSDLPPE-IGQLKNLQGLYVPKNKLALLPNE--IVNLKDLRELRLSDNQLTYLPEEKW 362

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           + + L++L L  N L+++P G  +L +L  L+LS N +  LP E+  L+ SL+ L L+GN
Sbjct: 363 KTKHLKVLYLDSNQLKTLPIGICSLKNLETLNLSFNELEELPSEVSNLK-SLRWLDLEGN 421


>gi|392841224|ref|NP_001255968.1| leucine-rich repeat protein SHOC-2 isoform 2 [Homo sapiens]
 gi|296221218|ref|XP_002756643.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Callithrix
           jacchus]
          Length = 536

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 178/358 (49%), Gaps = 19/358 (5%)

Query: 49  IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 108
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G L  L TL L  N L    
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 109 VEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 167
                L+ L +LDL +N L  +P  + ++ +L  L L  N + T+   + N    ++L  
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSI 222

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
             +++            + L      LS  S+ L L    LSAIP  + +   + +L+L 
Sbjct: 223 RENKI------------KQLPAEIGNLSSLSR-LGLRYNRLSAIPRSLAKCSALEELNLE 269

Query: 228 RNSIQELPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
            N+I  LP  L SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F
Sbjct: 270 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 329

Query: 287 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
               +L  L++  N + SLP +  F +   + EL L   QL + P D+  L  L +L LS
Sbjct: 330 SRAKVLSKLNMKDNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILS 387

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            N L+ +P G  NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 388 NNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 444



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 213/437 (48%), Gaps = 28/437 (6%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +LD+    + +L ++ I   T LTEL    N L  +P  +G L  L+ L L +N + S+P
Sbjct: 104 RLDLSKRSIHILPSS-IKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
            S+     L    + +N L  +P+ + +L  L TL L  N++     +   L +LS+L +
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSI 222

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDS 178
             N +  LP EIG +++L +L L  N L  +  SL        L       S LPE+  S
Sbjct: 223 RENKIKQLPAEIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 282

Query: 179 EASTTKEDLITMA------------TRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLD 225
             S  K + +T+A            ++ S T   L++E   ++ IP  I+   ++ +KL+
Sbjct: 283 --SLVKLNSLTLARNCFQLYPVGGPSQFS-TIYSLNMEHNRINKIPFGIFSRAKVLSKLN 339

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           +  N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G
Sbjct: 340 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HG 397

Query: 286 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
             ++  L+ LDL  N + SLP    +  L  LQ+L L   QL   P  I  L  L  L L
Sbjct: 398 LGNLRKLRELDLEENKLESLPNEIAY--LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGL 455

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            +N L  +PE    L +L EL L+DN N+ +LP EL L    L  + ++  PL  +   I
Sbjct: 456 GENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCS-KLSIMSIENCPLSHLPPQI 514

Query: 404 LDRGTKAVLKYLKDKIP 420
           +  G   ++++LK + P
Sbjct: 515 VAGGPSFIIQFLKMQGP 531



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 87/183 (47%), Gaps = 26/183 (14%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++                         L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-------------------------LDSLT 195

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            LYLR  ++     DI  L +L +L + +N ++ +P    NL+SL+ L L  N +SA+P 
Sbjct: 196 TLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGNLSSLSRLGLRYNRLSAIPR 255

Query: 378 ELG 380
            L 
Sbjct: 256 SLA 258


>gi|301764090|ref|XP_002917472.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and IQ
           domain-containing protein 4-like [Ailuropoda
           melanoleuca]
          Length = 560

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 173/414 (41%), Gaps = 66/414 (15%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           GN L  L    I + T L E+   +N     P  +  L  L  +DL +NR+ ++P  I  
Sbjct: 151 GNDLKSLPKE-IENQTKLREIYLKQNQFEVFPPELCVLYDLEVIDLDKNRLTAVPEEIGN 209

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 127
              L +FY+ +N+L  LP  LG+ S                      R SVLDLS N L 
Sbjct: 210 LTRLQKFYVAHNSLPVLPESLGRCS----------------------RXSVLDLSYNRLH 247

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            +P  + ++T + ++ L+GNPL                     ++P             L
Sbjct: 248 SIPHTLAELTGMTEIGLSGNPL--------------------EKVPR------------L 275

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           I   T + +    L L    L  +       G +  LDLS+N ++  P E+S+   L+ L
Sbjct: 276 ICRWTSVHL----LYLCNTGLRGLRRSFRRLGNLRFLDLSQNHLERCPSEVSALKHLEIL 331

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQI-LDLSYNIASL 304
            L  NKI   P +   SLS L  L L  N     P +    + +  L I  D      SL
Sbjct: 332 ALDDNKIWQLP-SDFGSLSKLKMLGLTGNQFLSFPEEILPLESLEKLYIGQDQGAKFTSL 390

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
           PE+   S L  L+ELY+    L   PT +  +  L ILD   N L+ +P+      +L E
Sbjct: 391 PEH--ISKLQSLKELYIENNHLEYLPTSLGSMPNLEILDCRHNRLKQLPDSICQAQALKE 448

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           L L DN I+ LP  L  L  +L+ L L  NPL    R +   G +A+    K K
Sbjct: 449 LLLEDNLITCLPENLDSL-VNLKVLTLVDNPLEDPPREVCAEGIQAIWANFKKK 501



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 110/254 (43%), Gaps = 49/254 (19%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD-WPDAILTSLS 266
           L+ IPS+I E  E+ +  L  N I+ +P  +    +++ L L+ NK++   P+  L  LS
Sbjct: 37  LTTIPSQILELEELEEAHLENNRIEAIPRGIQRLKNVRILYLNENKLRALCPE--LGRLS 94

Query: 267 SLSCLKLDNNPL----------------RQVPSDGFKDIPMLQILDLSYNIASLPENPPF 310
           SL  L L +NPL                 ++   G  +IP+     L +           
Sbjct: 95  SLEGLDLSHNPLLRSSLPVLGGLRRLRELRLYHTGLAEIPVGLCKLLHHLELLGLSGNDL 154

Query: 311 SSLPH-------LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
            SLP        L+E+YL++ Q    P ++  L  L ++DL +N L ++PE   NLT L 
Sbjct: 155 KSLPKEIENQTKLREIYLKQNQFEVFPPELCVLYDLEVIDLDKNRLTAVPEEIGNLTRLQ 214

Query: 364 ELDLSDNNISALPPELG------LLEPSLQALR----------------LDGNPLRSIRR 401
           +  ++ N++  LP  LG      +L+ S   L                 L GNPL  + R
Sbjct: 215 KFYVAHNSLPVLPESLGRCSRXSVLDLSYNRLHSIPHTLAELTGMTEIGLSGNPLEKVPR 274

Query: 402 TILDRGTKAVLKYL 415
            I  R T   L YL
Sbjct: 275 LIC-RWTSVHLLYL 287



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 5/111 (4%)

Query: 7   EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 66
           +G K T L  + I+    L EL    N L  +P ++GS+  L  LD   NR+  +P SI 
Sbjct: 383 QGAKFTSLPEH-ISKLQSLKELYIENNHLEYLPTSLGSMPNLEILDCRHNRLKQLPDSIC 441

Query: 67  GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL----KEYCVEACQ 113
              +L E  + +N ++ LP  L  L  L  L L  N L    +E C E  Q
Sbjct: 442 QAQALKELLLEDNLITCLPENLDSLVNLKVLTLVDNPLEDPPREVCAEGIQ 492


>gi|291223723|ref|XP_002731858.1| PREDICTED: leucine rich repeat containing 40-like, partial
            [Saccoglossus kowalevskii]
          Length = 1212

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 201/470 (42%), Gaps = 83/470 (17%)

Query: 18   LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
            +I+ +  + +L    N L+ +P+ + +L++L  LD+  N++ +IP S+    +L    + 
Sbjct: 747  IISEYGHIKKLNLQNNRLSDLPDEMRNLTQLEVLDVSGNKLENIPPSLYKLTNLQHLILS 806

Query: 78   NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 136
               +S + + +  L+KL  LD+  N + +   E   L +L VLDL +N +  LP E+  +
Sbjct: 807  GTRISIVDSNICNLTKLELLDVKGNVITKLPPELGALDKLEVLDLQDNDIHNLPRELTSL 866

Query: 137  TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
              L KL +  NP+      +      A   Y                  D+I M  +   
Sbjct: 867  KKLTKLCVERNPIEEPPYDICCKGFKAFNHYW-----------------DIIGMMEKNGE 909

Query: 197  TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
            + +E+ L    L  IPS I +   + KL+L  N +  LP E+     L+ L LSRNK  +
Sbjct: 910  SCEEMDLSSKQLVYIPSMISQYTHLKKLNLHNNYLSALPEEVGKLTDLEELNLSRNKFPE 969

Query: 257  WPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPM-----------------LQILDL 297
             P  IL +LS LS L + +N L  V SD    K++ +                 L  LD+
Sbjct: 970  LPSIIL-NLSKLSMLDVSDNQLSVVSSDIGNIKEVDLSHNSISIITNETNHSYKLTKLDV 1028

Query: 298  SYN-IASLPEN--------------------PPFSSLPHLQELYLRRMQLREAPTDILRL 336
            S N + S  EN                         L  L  L +    +++ P +I +L
Sbjct: 1029 SKNRLTSFRENVGMFEKLQQLNISINEIKSIDGIHQLCMLTYLNIENNPIKQIPQEISKL 1088

Query: 337  QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE------------- 383
            + L +L  S N L ++P    +L  L ++DLS N ++ +P E+  LE             
Sbjct: 1089 KTLTVLKASNNYLTALPSSIAHLVELLDVDLSHNEVTRIPKEIESLEKLTTLNLCSNKLE 1148

Query: 384  ---------PSLQALRLDGNP--LRSIRRTILDRGTKAVLKYLKDKIPEN 422
                     P+L+ +RLDGNP  +  +   I   G   + +Y +D   EN
Sbjct: 1149 SLPRELGQLPALKDIRLDGNPDYIGDVPSAIYLHGIDKIKRYWRDIDTEN 1198



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 208/467 (44%), Gaps = 90/467 (19%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I  +  + ++  S N L+ +P+ +  + +L  +DL  N+++  P S+     L+   +  
Sbjct: 228 IGQYGHIKKIRLSGNNLSTLPDEVKDMEQLQEIDLSCNKLVHFPPSLMKLTRLSVLDLSE 287

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           NA+++LP E+  LS L  L++  N +    +   ++  L+ L++    +  LPPE+G ++
Sbjct: 288 NAMTSLPNEICSLSHLQKLNISGNNIGVLPLAMGEMTELTSLEMRRIGIEFLPPELGNVS 347

Query: 138 TLRKLLLTGNPLRTL----------RSSLVNGPTPALLKYLRSRLPENEDSEASTTKE-- 185
            L  L LTGN + ++          +  +++G +        +  P ++    +  ++  
Sbjct: 348 NLEVLDLTGNHITSIPRELKKLSKLKELIIDGNSI-------TEPPMDKCGSVADFRQYW 400

Query: 186 DLITMATRLSVTSK-ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS- 243
            +I M       S+ E++  G  L  +P+ I +   I KL LS N +  LP E+   +  
Sbjct: 401 QIIEMLEEYQDESRVEMNFTGRRLFYLPNCIGDYKHIKKLRLSGNELTTLPDEMKYMSEE 460

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--- 300
           L  L LS NK+ + P  +L  L++L+ L L+ N +  +  D  K +  LQ LDL+ N   
Sbjct: 461 LDELDLSCNKLDEIPRCVL-QLTNLTYLNLNGNVIHNISPD-IKRLRKLQTLDLNGNKVM 518

Query: 301 -----IASLP------------ENPP---------------------------------- 309
                +A LP            E PP                                  
Sbjct: 519 RLIRELAELPILETLQVGGNPIEEPPLTICEKGVPEFKQYWQIIGMLEKYKDTSLDEMNL 578

Query: 310 ----FSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
               F  LP       H++++ L   +L E P  I  L QL ILDLS N L+ IP    +
Sbjct: 579 SGNGFICLPASVGEYRHIKKIILGGNKLSELPETISELTQLEILDLSHNKLKEIPSSLFD 638

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
           L++L+ LD+  N IS +PP +G L+  L+ L +  N L ++ R I D
Sbjct: 639 LSNLSHLDIRGNQISLIPPNIGSLQ-RLETLDVSENCLSTLPREIKD 684



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 189/420 (45%), Gaps = 57/420 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + K+ + GNKL+ L    I+  T L  L  S N L  +P ++  LS L  LD+  N+I  
Sbjct: 596 IKKIILGGNKLSELPET-ISELTQLEILDLSHNKLKEIPSSLFDLSNLSHLDIRGNQISL 654

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK----EYC---VEACQ 113
           IP +I     L    +  N LS LP E+  L+ L  LD+  N +K    + C   V+A +
Sbjct: 655 IPPNIGSLQRLETLDVSENCLSTLPREIKDLTNLKILDIGGNDIKCPPMDICSKGVDAFK 714

Query: 114 LRLSV--------------LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 159
               +              +DL+N +L  LP  I +   ++KL L  N L  L   + N 
Sbjct: 715 RYWQIIELMEKSKNKDNKEMDLNNQNLEYLPCIISEYGHIKKLNLQNNRLSDLPDEMRN- 773

Query: 160 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 219
                       L + E  + S  K + I  +       + L L G  +S + S I    
Sbjct: 774 ------------LTQLEVLDVSGNKLENIPPSLYKLTNLQHLILSGTRISIVDSNICNLT 821

Query: 220 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
           ++  LD+  N I +LPPEL +   L+ L L  N I + P   LTSL  L+ L ++ NP+ 
Sbjct: 822 KLELLDVKGNVITKLPPELGALDKLEVLDLQDNDIHNLPRE-LTSLKKLTKLCVERNPIE 880

Query: 280 QVPSD----GFKD-------IPMLQI-------LDL-SYNIASLPENPPFSSLPHLQELY 320
           + P D    GFK        I M++        +DL S  +  +P     S   HL++L 
Sbjct: 881 EPPYDICCKGFKAFNHYWDIIGMMEKNGESCEEMDLSSKQLVYIPS--MISQYTHLKKLN 938

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L    L   P ++ +L  L  L+LS+N    +P    NL+ L+ LD+SDN +S +  ++G
Sbjct: 939 LHNNYLSALPEEVGKLTDLEELNLSRNKFPELPSIILNLSKLSMLDVSDNQLSVVSSDIG 998



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 141/539 (26%), Positives = 221/539 (41%), Gaps = 137/539 (25%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP--------------------- 39
           ++K+ ++ NKLT   +  I S T L EL  S N L  +P                     
Sbjct: 32  VTKIRLDDNKLTTFPD--IKSLTQLEELSVSGNELKEIPMCVYELVNLVLLNLNDNNIKS 89

Query: 40  --ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
               IG LS+L  L +  N + S+P  IS   SL    + NN++  +P  LG L +L  L
Sbjct: 90  MSSKIGKLSQLKCLQMKGNDLSSVPDEISELLSLQSLELSNNSMLQVPTSLGNLKELKVL 149

Query: 98  DLHSN-------QLKEY--------------------CVEACQLR-----LSVL------ 119
           DL  N       QLK+                     C    + R     + +L      
Sbjct: 150 DLQDNNIRVLPRQLKDIELLEDLLVKNNPIEDPPPDRCSGVEEFRRYWELVEILEKYKDT 209

Query: 120 -----DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL----------------RSSLVN 158
                DL +  L+ +P  IG+   ++K+ L+GN L TL                 + LV+
Sbjct: 210 TCIEIDLRDKGLTYIPATIGQYGHIKKIRLSGNNLSTLPDEVKDMEQLQEIDLSCNKLVH 269

Query: 159 GPTPALLKYLR-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 217
            P P+L+K  R S L  +E++  S   E  I   + L    ++L++ G N+  +P  + E
Sbjct: 270 FP-PSLMKLTRLSVLDLSENAMTSLPNE--ICSLSHL----QKLNISGNNIGVLPLAMGE 322

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
             E+T L++ R  I+ LPPEL + ++L+ L L+ N I   P  +         + +D N 
Sbjct: 323 MTELTSLEMRRIGIEFLPPELGNVSNLEVLDLTGNHITSIPRELKKLSKLKELI-IDGNS 381

Query: 278 LRQVPSD------GFK-----------------------------------DIPMLQILD 296
           + + P D       F+                                   D   ++ L 
Sbjct: 382 ITEPPMDKCGSVADFRQYWQIIEMLEEYQDESRVEMNFTGRRLFYLPNCIGDYKHIKKLR 441

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           LS N + +LP+   + S   L EL L   +L E P  +L+L  L  L+L+ N + +I   
Sbjct: 442 LSGNELTTLPDEMKYMS-EELDELDLSCNKLDEIPRCVLQLTNLTYLNLNGNVIHNISPD 500

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
            K L  L  LDL+ N +  L  EL  L P L+ L++ GNP+     TI ++G     +Y
Sbjct: 501 IKRLRKLQTLDLNGNKVMRLIRELAEL-PILETLQVGGNPIEEPPLTICEKGVPEFKQY 558



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 177/364 (48%), Gaps = 26/364 (7%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D+ G+  T +    I  +  +T++    N L   P+ I SL++L  L +  N +  IP 
Sbjct: 12  MDLSGHGFTYIGTG-ICEYNHVTKIRLDDNKLTTFPD-IKSLTQLEELSVSGNELKEIPM 69

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLS 122
            +    +L    + +N + ++ +++GKLS+L  L +  N L     E +  L L  L+LS
Sbjct: 70  CVYELVNLVLLNLNDNNIKSMSSKIGKLSQLKCLQMKGNDLSSVPDEISELLSLQSLELS 129

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN---ED-- 177
           NNS+  +P  +G +  L+ L L  N +R L   L +      ++ L   L +N   ED  
Sbjct: 130 NNSMLQVPTSLGNLKELKVLDLQDNNIRVLPRQLKD------IELLEDLLVKNNPIEDPP 183

Query: 178 -SEASTTKE-----DLITMATRL-SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
               S  +E     +L+ +  +    T  E+ L    L+ IP+ I + G I K+ LS N+
Sbjct: 184 PDRCSGVEEFRRYWELVEILEKYKDTTCIEIDLRDKGLTYIPATIGQYGHIKKIRLSGNN 243

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           +  LP E+     LQ + LS NK+  +P +++  L+ LS L L  N +  +P++    + 
Sbjct: 244 LSTLPDEVKDMEQLQEIDLSCNKLVHFPPSLM-KLTRLSVLDLSENAMTSLPNE-ICSLS 301

Query: 291 MLQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
            LQ L++S  NI  LP       +  L  L +RR+ +   P ++  +  L +LDL+ N +
Sbjct: 302 HLQKLNISGNNIGVLP--LAMGEMTELTSLEMRRIGIEFLPPELGNVSNLEVLDLTGNHI 359

Query: 350 QSIP 353
            SIP
Sbjct: 360 TSIP 363



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 45/206 (21%)

Query: 1    MSKLDVEGNKLTVLSNNL---------------------IASWTMLTELIASKNLLNGMP 39
            ++KLDV  N+LT    N+                     I    MLT L    N +  +P
Sbjct: 1023 LTKLDVSKNRLTSFRENVGMFEKLQQLNISINEIKSIDGIHQLCMLTYLNIENNPIKQIP 1082

Query: 40   ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 99
            + I  L  L  L    N + ++PSSI+    L +  + +N ++ +P E+  L KL TL+L
Sbjct: 1083 QEISKLKTLTVLKASNNYLTALPSSIAHLVELLDVDLSHNEVTRIPKEIESLEKLTTLNL 1142

Query: 100  HSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP--LRTLRSSLV 157
             SN+L+                       LP E+G++  L+ + L GNP  +  + S++ 
Sbjct: 1143 CSNKLE----------------------SLPRELGQLPALKDIRLDGNPDYIGDVPSAIY 1180

Query: 158  NGPTPALLKYLRSRLPENEDSEASTT 183
                  + +Y R    EN   E S +
Sbjct: 1181 LHGIDKIKRYWRDIDTENSKEERSIS 1206


>gi|426253114|ref|XP_004020245.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Ovis
           aries]
          Length = 536

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 178/358 (49%), Gaps = 19/358 (5%)

Query: 49  IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 108
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G L  L TL L  N L    
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 109 VEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 167
                L+ L +LDL +N L  +P  + ++ +L  L L  N + T+   + N    ++L  
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSI 222

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
             +++            + L      LS  S+ L L    LSAIP  + +   + +L+L 
Sbjct: 223 RENKI------------KQLPAEIGNLSSLSR-LGLRYNRLSAIPRSLAKCSALEELNLE 269

Query: 228 RNSIQELPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
            N+I  LP  L SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F
Sbjct: 270 NNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIF 329

Query: 287 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
               +L  L++  N + SLP +  F +   + EL L   QL + P D+  L  L +L LS
Sbjct: 330 SRAKVLSKLNMKDNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILS 387

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            N L+ +P G  NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 388 NNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 444



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 213/437 (48%), Gaps = 28/437 (6%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +LD+    + +L ++ I   T LTEL    N L  +P  +G L  L+ L L +N + S+P
Sbjct: 104 RLDLSKRSIHILPSS-IKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
            S+     L    + +N L  +P+ + +L  L TL L  N++     +   L +LS+L +
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSI 222

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDS 178
             N +  LP EIG +++L +L L  N L  +  SL        L       S LPE+  S
Sbjct: 223 RENKIKQLPAEIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 282

Query: 179 EASTTKEDLITMA------------TRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLD 225
             S  K + +T+A            ++ S T   L++E   ++ IP  I+   ++ +KL+
Sbjct: 283 --SLVKLNSLTLARNCFQLYPVGGPSQFS-TIYSLNMEHNRINKIPFGIFSRAKVLSKLN 339

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           +  N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G
Sbjct: 340 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HG 397

Query: 286 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
             ++  L+ LDL  N + SLP    +  L  LQ+L L   QL   P  I  L  L  L L
Sbjct: 398 LGNLRKLRELDLEENKLESLPNEIAY--LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGL 455

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            +N L  +PE    L +L EL L+DN N+ +LP EL L    L  + ++  PL  +   I
Sbjct: 456 GENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCS-KLSIMSIENCPLSHLPPQI 514

Query: 404 LDRGTKAVLKYLKDKIP 420
           +  G   ++++LK + P
Sbjct: 515 VAGGPSFIIQFLKMQGP 531



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 87/183 (47%), Gaps = 26/183 (14%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++                         L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-------------------------LDSLT 195

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            LYLR  ++     DI  L +L +L + +N ++ +P    NL+SL+ L L  N +SA+P 
Sbjct: 196 TLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGNLSSLSRLGLRYNRLSAIPR 255

Query: 378 ELG 380
            L 
Sbjct: 256 SLA 258


>gi|330793753|ref|XP_003284947.1| leucine-rich repeat-containing protein [Dictyostelium purpureum]
 gi|325085163|gb|EGC38576.1| leucine-rich repeat-containing protein [Dictyostelium purpureum]
          Length = 509

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 210/452 (46%), Gaps = 66/452 (14%)

Query: 27  ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP- 85
           EL+ S+N L  +PE IG LS++  +D  +NRI  IP  I    +L + ++ NN L   P 
Sbjct: 41  ELLLSENDLITIPEEIGKLSKVEIIDFSKNRINYIPPEIGSLSTLKQLFLSNNKLFYTPL 100

Query: 86  -AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
              LG L  L  LDL +NQL +  VE  +L  L  LD+S+N L   P E GK+  L+   
Sbjct: 101 TPNLGSLKSLTRLDLSANQLDDLPVELSKLEALEYLDISDNQLQSFPLEFGKLYNLQVFN 160

Query: 144 LTGNPLRTL----------------RSSLVNGPTPALLKYLRS----------RLPENED 177
            + N L++L                 + L   P    L  L S          ++PE   
Sbjct: 161 CSKNSLKSLPGEISGWVKLQELNVSNNQLTFLPNQICLLGLLSTLNVGFNKLQQVPEELS 220

Query: 178 SEASTTKEDL-----ITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRN- 229
           S  S T  DL     +    +LS     K+LS+  + ++ +P  +    E+ +LD+  N 
Sbjct: 221 SMVSLTDLDLKVNPPLQYVPQLSNLRQLKKLSIRNLQITHLPLGLGLLSELIELDIRDNP 280

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR--QVPSDGFK 287
            ++E+P ++++  +LQ L L  N ++  P  I  +L +L  L L  N L    +PS+  K
Sbjct: 281 QLKEIPYDIATLINLQKLDLFGNNMRIVPREI-GNLINLQHLDLRQNKLTIDNIPSEIGK 339

Query: 288 DIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
            + + ++L  +  + +LP  P  SS+  L+E      QL+  P +I  L  L  ++LS N
Sbjct: 340 LVNLKKLLLSNNLLVALP--PEISSMKALKEFEASNNQLQSVPAEIGELTGLTKINLSGN 397

Query: 348 SLQSIPEGFKNLTSL-----------------------TELDLSDNNISALPPELGLLEP 384
            L SIP  F NL+ L                       T+ DLS N ++ LP E G L  
Sbjct: 398 KLTSIPPSFGNLSELVICDLKSNEIAELPNTLNGLKACTKFDLSHNMLTELPWEFGDLT- 456

Query: 385 SLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
            L  L +  NPL      I+ +GT+ ++++LK
Sbjct: 457 GLTILDVGHNPLTIPPNPIVMKGTETIIQWLK 488



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 165/356 (46%), Gaps = 57/356 (16%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           +DL +  I  +P ++ G     E  +  N L  +P E+GKLSK                 
Sbjct: 20  VDLRKMNIDKLPPTV-GALQCKELLLSENDLITIPEEIGKLSK----------------- 61

Query: 111 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 170
                + ++D S N ++ +PPEIG ++TL++L L+ N                  K   +
Sbjct: 62  -----VEIIDFSKNRINYIPPEIGSLSTLKQLFLSNN------------------KLFYT 98

Query: 171 RLPENEDSEASTTKEDLITMATRLSVTSKELS----LEGMNLS-----AIPSEIWEAGEI 221
            L  N  S  S T+ DL   A +L     ELS    LE +++S     + P E  +   +
Sbjct: 99  PLTPNLGSLKSLTRLDL--SANQLDDLPVELSKLEALEYLDISDNQLQSFPLEFGKLYNL 156

Query: 222 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
              + S+NS++ LP E+S    LQ L +S N++   P+ I   L  LS L +  N L+QV
Sbjct: 157 QVFNCSKNSLKSLPGEISGWVKLQELNVSNNQLTFLPNQICL-LGLLSTLNVGFNKLQQV 215

Query: 282 PSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           P +    +  L  LDL  N   L   P  S+L  L++L +R +Q+   P  +  L +L  
Sbjct: 216 PEE-LSSMVSLTDLDLKVN-PPLQYVPQLSNLRQLKKLSIRNLQITHLPLGLGLLSELIE 273

Query: 342 LDLSQN-SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           LD+  N  L+ IP     L +L +LDL  NN+  +P E+G L  +LQ L L  N L
Sbjct: 274 LDIRDNPQLKEIPYDIATLINLQKLDLFGNNMRIVPREIGNL-INLQHLDLRQNKL 328



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 14/189 (7%)

Query: 1   MSKLDVEGNKLTVLSNNL---IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 57
           +  LD+  NKLT+  +N+   I     L +L+ S NLL  +P  I S+  L   +   N+
Sbjct: 318 LQHLDLRQNKLTI--DNIPSEIGKLVNLKKLLLSNNLLVALPPEISSMKALKEFEASNNQ 375

Query: 58  ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-----CVEAC 112
           + S+P+ I     L +  +  N L+++P   G LS+L   DL SN++ E       ++AC
Sbjct: 376 LQSVPAEIGELTGLTKINLSGNKLTSIPPSFGNLSELVICDLKSNEIAELPNTLNGLKAC 435

Query: 113 QLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 172
               +  DLS+N L+ LP E G +T L  L +  NPL    + +V   T  ++++L+   
Sbjct: 436 ----TKFDLSHNMLTELPWEFGDLTGLTILDVGHNPLTIPPNPIVMKGTETIIQWLKKNE 491

Query: 173 PENEDSEAS 181
            E    + S
Sbjct: 492 KEGRKGKVS 500


>gi|418727618|ref|ZP_13286206.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958976|gb|EKO22753.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 377

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 164/350 (46%), Gaps = 43/350 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI------------- 157

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 158 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 195 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 252

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L LS N 
Sbjct: 253 KNLQTLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 310

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L  +P+    L +L  L L  N ++ LP E+  L+ +LQ L L+ N L S
Sbjct: 311 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK-NLQTLYLNNNQLSS 359



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 165/345 (47%), Gaps = 40/345 (11%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+  L  +P  IG L  L RL LH N++  +P  I    +L   Y+ +N L+ LP E+ +
Sbjct: 54  SRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQ 113

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL SNQL     E  QL+ L +L L +N L+ L  +I ++  L+ L L+ N L
Sbjct: 114 LKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQL 173

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
            TL + +        LK L+S L  +E+  A+  KE  I     L V    L L    ++
Sbjct: 174 TTLPNEIEQ------LKNLKS-LYLSENQFATFPKE--IGQLQNLKV----LFLNNNQIT 220

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P+EI +  ++  L LS N +  LP E+    +LQTL LS N++   P  +   L +L 
Sbjct: 221 ILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEV-GQLENLQ 279

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 329
            L L NN L+ +P +                            L +LQ L+L   QL   
Sbjct: 280 TLDLRNNQLKTLPKE-------------------------IEQLKNLQTLFLSNNQLTIL 314

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           P +I +L+ L  L L  N L ++P   + L +L  L L++N +S+
Sbjct: 315 PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQLSS 359



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 137/291 (47%), Gaps = 42/291 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS   L  LP EIGK+  L++L L  N L  L   +       LL YLRS   
Sbjct: 46  LDVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL-YLRSN-- 102

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                             L+ +P EI +   +  LDL  N +  
Sbjct: 103 ---------------------------------RLTTLPKEIEQLKNLQVLDLGSNQLTV 129

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQ L L  N++      I   L +L  L L NN L  +P++  + +  L+
Sbjct: 130 LPQEIEQLKNLQLLYLHSNRLTTLSKDI-EQLQNLKSLDLSNNQLTTLPNE-IEQLKNLK 187

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L LS N  A+ P+      L +L+ L+L   Q+   P +I +L++L+ L LS N L ++
Sbjct: 188 SLYLSENQFATFPK--EIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITL 245

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P+  + L +L  LDLS N ++ LP E+G LE +LQ L L  N L+++ + I
Sbjct: 246 PKEIEQLKNLQTLDLSYNQLTILPKEVGQLE-NLQTLDLRNNQLKTLPKEI 295



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 83/176 (47%), Gaps = 25/176 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  
Sbjct: 163 LKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI 221

Query: 61  IPSSISGCCSLAEFYMGNNAL-----------------------SALPAELGKLSKLGTL 97
           +P+ I+    L   Y+ +N L                       + LP E+G+L  L TL
Sbjct: 222 LPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTL 281

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           DL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  L L  N L TL
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTL 337



 Score = 42.0 bits (97), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 1/83 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L  L    I     L  L  S N L  +P+ IG L  L+ L L  N++ +
Sbjct: 278 LQTLDLRNNQLKTLPKE-IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTT 336

Query: 61  IPSSISGCCSLAEFYMGNNALSA 83
           +P+ I    +L   Y+ NN LS+
Sbjct: 337 LPNEIEQLKNLQTLYLNNNQLSS 359


>gi|198429521|ref|XP_002125267.1| PREDICTED: similar to Suppressor Of Clr family member (soc-2)
           [Ciona intestinalis]
          Length = 733

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 191/407 (46%), Gaps = 46/407 (11%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +PE++  L  L  L+   N+I S+P  I    +L + Y   N L+ LP  +  L 
Sbjct: 70  NALTSLPESLCDLKYLEYLECSDNQIKSLPHRIGNLKNLIQLYANRNCLTELPVGISYLW 129

Query: 93  KLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
           +L  L L+ N++    +E  Q   ++ +L LSNN L+ LP  I +M  L KL L+GN + 
Sbjct: 130 QLEVLGLNGNRITHLPIEMGQFLEQIRILGLSNNCLNALPTAICRMRKLVKLGLSGNKIS 189

Query: 151 TLRSSLVNGPT-------PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           +L S++    +          L++L S+L   +  E      + +            L  
Sbjct: 190 SLPSTIRRLESLIDLRLDDNRLRFLPSQLFTLKSLEELALSRNFLRRVHSHVSRLPSLRC 249

Query: 204 EGMN---LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK------- 253
            GMN   +S +P +I +  ++  L L  N + +LPPEL    +L+ L + +N+       
Sbjct: 250 LGMNHNQISFVPHQIGDCSKLEILGLESNHLTQLPPELGKLFTLRELYIGKNRFSGARCI 309

Query: 254 -------------------IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
                              +KD P  + T+ SSL+ +KL  N L  +P      + ++ +
Sbjct: 310 PESLSRLRNLTVLDVAGNQVKDLPLELKTA-SSLNEVKLSKNVLNHLPVALCSLVDVI-L 367

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           LD+S N +  +P +    +L  L+++ L R   ++ PT++  + QL  ++ S N + +IP
Sbjct: 368 LDVSDNKLKCIPRD--IRNLSSLRKIILSRNNFKQFPTELCHVTQLEEINFSNNLISTIP 425

Query: 354 EGFKNLTSLTELDLSDNNISALPPEL-GLLEPSLQALRLDGNPLRSI 399
                L  LTE+D+S N     P EL G++   L+AL + GN L  I
Sbjct: 426 REISFLKRLTEIDISHNKFQQFPRELCGVV--GLRALDVSGNQLTDI 470



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 187/394 (47%), Gaps = 23/394 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN++T L   +      +  L  S N LN +P  I  + +L++L L  N+I S+PS
Sbjct: 134 LGLNGNRITHLPIEMGQFLEQIRILGLSNNCLNALPTAICRMRKLVKLGLSGNKISSLPS 193

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
           +I    SL +  + +N L  LP++L  L  L  L L  N L+       +L  L  L ++
Sbjct: 194 TIRRLESLIDLRLDDNRLRFLPSQLFTLKSLEELALSRNFLRRVHSHVSRLPSLRCLGMN 253

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPENEDSE 179
           +N +S +P +IG  + L  L L  N L  L         P L K    R   + +N  S 
Sbjct: 254 HNQISFVPHQIGDCSKLEILGLESNHLTQL--------PPELGKLFTLRELYIGKNRFSG 305

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           A    E L  +   L+V    L + G  +  +P E+  A  + ++ LS+N +  LP  L 
Sbjct: 306 ARCIPESLSRLRN-LTV----LDVAGNQVKDLPLELKTASSLNEVKLSKNVLNHLPVALC 360

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           S   +  L +S NK+K  P  I  +LSSL  + L  N  +Q P++    +  L+ ++ S 
Sbjct: 361 SLVDVILLDVSDNKLKCIPRDI-RNLSSLRKIILSRNNFKQFPTE-LCHVTQLEEINFSN 418

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N I+++P    F  L  L E+ +   + ++ P ++  +  LR LD+S N L  IP  FK 
Sbjct: 419 NLISTIPREISF--LKRLTEIDISHNKFQQFPRELCGVVGLRALDVSGNQLTDIPYEFKF 476

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
             +L  L+LSDN     P  +  +  +L+ L  D
Sbjct: 477 FENLERLNLSDNQFDEFPIRVCFV-TTLKELHFD 509



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 198/433 (45%), Gaps = 26/433 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L + L  +   L EL  S+N L  +   +  L  L  L ++ N+I  +P 
Sbjct: 204 LRLDDNRLRFLPSQLF-TLKSLEELALSRNFLRRVHSHVSRLPSLRCLGMNHNQISFVPH 262

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK-EYCV--EACQLR-LSVL 119
            I  C  L    + +N L+ LP ELGKL  L  L +  N+     C+     +LR L+VL
Sbjct: 263 QIGDCSKLEILGLESNHLTQLPPELGKLFTLRELYIGKNRFSGARCIPESLSRLRNLTVL 322

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL---PENE 176
           D++ N +  LP E+   ++L ++ L+ N L  L  +L +     LL    ++L   P + 
Sbjct: 323 DVAGNQVKDLPLELKTASSLNEVKLSKNVLNHLPVALCSLVDVILLDVSDNKLKCIPRDI 382

Query: 177 DSEASTTK-----EDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
            + +S  K      +     T L   ++  E++     +S IP EI     +T++D+S N
Sbjct: 383 RNLSSLRKIILSRNNFKQFPTELCHVTQLEEINFSNNLISTIPREISFLKRLTEIDISHN 442

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN-----PLRQVPSD 284
             Q+ P EL     L+ L +S N++ D P        +L  L L +N     P+R     
Sbjct: 443 KFQQFPRELCGVVGLRALDVSGNQLTDIPYE-FKFFENLERLNLSDNQFDEFPIRVCFVT 501

Query: 285 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
             K++   Q       +  +PE+     L HL+ + L   Q++  P  I   + LR L +
Sbjct: 502 TLKELHFDQ--KCGRKLELVPEH--ICELEHLENISLDHNQIQNLPESISNCRSLRKLSV 557

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
             N L+ +PE    L +L  LDL  N ++ LP ++  LE  L  + L  NPL+   + + 
Sbjct: 558 VGNVLEKLPESICELPNLKSLDLKGNQLTELPTQIHRLEKQLSHISLGENPLKDPLKVVA 617

Query: 405 DRG-TKAVLKYLK 416
             G    + KY+K
Sbjct: 618 MTGDINPIGKYVK 630



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 179/386 (46%), Gaps = 30/386 (7%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           LN +P+ +  ++ L  L  + N++  IPS +     L    +  NAL++LP  L  L  L
Sbjct: 26  LNEVPKEVFDITELQCLVANNNKLKEIPSDVRKLSCLQAISLRGNALTSLPESLCDLKYL 85

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L+   NQ+K        L+ L  L  + N L+ LP  I  +  L  L L GN +  L 
Sbjct: 86  EYLECSDNQIKSLPHRIGNLKNLIQLYANRNCLTELPVGISYLWQLEVLGLNGNRITHLP 145

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
             +        L+ +R     N    A      L T   R+    K L L G  +S++PS
Sbjct: 146 IEM-----GQFLEQIRILGLSNNCLNA------LPTAICRMRKLVK-LGLSGNKISSLPS 193

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
            I     +  L L  N ++ LP +L +  SL+ L LSRN ++     + + L SL CL +
Sbjct: 194 TIRRLESLIDLRLDDNRLRFLPSQLFTLKSLEELALSRNFLRRVHSHV-SRLPSLRCLGM 252

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL---REA 329
           ++N +  VP     D   L+IL L  N +  LP  P    L  L+ELY+ + +    R  
Sbjct: 253 NHNQISFVPHQ-IGDCSKLEILGLESNHLTQLP--PELGKLFTLRELYIGKNRFSGARCI 309

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG------LLE 383
           P  + RL+ L +LD++ N ++ +P   K  +SL E+ LS N ++ LP  L       LL+
Sbjct: 310 PESLSRLRNLTVLDVAGNQVKDLPLELKTASSLNEVKLSKNVLNHLPVALCSLVDVILLD 369

Query: 384 PS---LQALRLDGNPLRSIRRTILDR 406
            S   L+ +  D   L S+R+ IL R
Sbjct: 370 VSDNKLKCIPRDIRNLSSLRKIILSR 395



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 7/199 (3%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           ++L+  NL+ +P E+++  E+  L  + N ++E+P ++   + LQ + L  N +   P++
Sbjct: 19  VTLDIRNLNEVPKEVFDITELQCLVANNNKLKEIPSDVRKLSCLQAISLRGNALTSLPES 78

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENP-PFSSLPHLQEL 319
            L  L  L  L+  +N ++ +P    +   +  ++ L  N   L E P   S L  L+ L
Sbjct: 79  -LCDLKYLEYLECSDNQIKSLPH---RIGNLKNLIQLYANRNCLTELPVGISYLWQLEVL 134

Query: 320 YLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
            L   ++   P ++ + L+Q+RIL LS N L ++P     +  L +L LS N IS+LP  
Sbjct: 135 GLNGNRITHLPIEMGQFLEQIRILGLSNNCLNALPTAICRMRKLVKLGLSGNKISSLPST 194

Query: 379 LGLLEPSLQALRLDGNPLR 397
           +  LE SL  LRLD N LR
Sbjct: 195 IRRLE-SLIDLRLDDNRLR 212


>gi|358336649|dbj|GAA32880.2| leucine-rich repeat protein soc-2 homolog [Clonorchis sinensis]
          Length = 586

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 200/419 (47%), Gaps = 23/419 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  NKL  +   +I S   LT L+   N +  + + I  L++L  L + +N+I S+PS
Sbjct: 177 LDIRHNKLCEIPP-VIYSLVNLTHLLMRFNRIRVVDDDISKLTKLQVLSVRENKIRSLPS 235

Query: 64  S--ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRL-SVLD 120
           +  I     L    + +N L  +P E+    KL TL+L  N+L+       +LRL   + 
Sbjct: 236 NPGIEKLTQLMTLDVSHNHLEQVPEEIQHCQKLTTLNLQHNELRSLPESIGELRLLERVG 295

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           L  N L  LP  + +   L +L + GN +  L   L+     A L+ L S +       A
Sbjct: 296 LRYNHLECLPASMAQCDNLLELNIEGNNIVQLPEGLL-----AHLRKLSSLVVSRNYFRA 350

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELS 239
                       +   + + L+++   +S IP  I+  A  + KL++  N +  LPP++ 
Sbjct: 351 FPPG------GPQQFTSIQSLNMDHNQISKIPFGIFSRASHLAKLNMKDNQLASLPPDIK 404

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           S   L  L L  N++   PD +   L +L  L L NN L+++P    +++  LQ+LDL  
Sbjct: 405 SWEVLVELNLGTNQLTKLPDDV-EHLVNLEVLILSNNQLKRIPPT-IQELKKLQLLDLEE 462

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +  LP       L  LQ L ++  +L E P  I  LQ L  L + +N LQ +P    +
Sbjct: 463 NHLECLPLE--IGQLSELQRLIVQSNRLTELPRTIGMLQSLIHLAVGENDLQRLPPEIGD 520

Query: 359 LTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
           L  L  L L+DN N++ LP ELG+   SLQ + ++  PL  I   +   G   V++YL+
Sbjct: 521 LHKLETLYLNDNPNLNDLPTELGMCF-SLQIMSIENCPLSQIPVEVTAGGPSLVIQYLR 578



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 170/394 (43%), Gaps = 44/394 (11%)

Query: 50  RLDLHQNRILSIPSSISGCCS-LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY- 107
           RLDL + ++ S+P SI      L E Y+  N L +LP E+G L  L  L L  N L    
Sbjct: 106 RLDLSKGQLHSLPPSIRDLAGHLRELYLYCNKLVSLPPEIGLLPHLEILMLQENSLSRLP 165

Query: 108 -CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
             +  C   L +LD+ +N L  +PP I  +  L  LL+  N +R +   +       +L 
Sbjct: 166 DSLAGCT-NLRMLDIRHNKLCEIPPVIYSLVNLTHLLMRFNRIRVVDDDISKLTKLQVLS 224

Query: 167 YLRSR---LPENEDSEASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSE 214
              ++   LP N   E  T    L      L    +E         L+L+   L ++P  
Sbjct: 225 VRENKIRSLPSNPGIEKLTQLMTLDVSHNHLEQVPEEIQHCQKLTTLNLQHNELRSLPES 284

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           I E   + ++ L  N ++ LP  ++ C +L  L +  N I   P+ +L  L  LS L + 
Sbjct: 285 IGELRLLERVGLRYNHLECLPASMAQCDNLLELNIEGNNIVQLPEGLLAHLRKLSSLVVS 344

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYN-------------------------IASLPENPP 309
            N  R  P  G +    +Q L++ +N                         +ASLP  P 
Sbjct: 345 RNYFRAFPPGGPQQFTSIQSLNMDHNQISKIPFGIFSRASHLAKLNMKDNQLASLP--PD 402

Query: 310 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
             S   L EL L   QL + P D+  L  L +L LS N L+ IP   + L  L  LDL +
Sbjct: 403 IKSWEVLVELNLGTNQLTKLPDDVEHLVNLEVLILSNNQLKRIPPTIQELKKLQLLDLEE 462

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           N++  LP E+G L   LQ L +  N L  + RTI
Sbjct: 463 NHLECLPLEIGQLS-ELQRLIVQSNRLTELPRTI 495



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 189/397 (47%), Gaps = 26/397 (6%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           L+  +N L+ +P+++   + L  LD+  N++  IP  I    +L    M  N +  +  +
Sbjct: 154 LMLQENSLSRLPDSLAGCTNLRMLDIRHNKLCEIPPVIYSLVNLTHLLMRFNRIRVVDDD 213

Query: 88  LGKLSKLGTLDLHSNQLKEY----CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           + KL+KL  L +  N+++       +E    +L  LD+S+N L  +P EI     L  L 
Sbjct: 214 ISKLTKLQVLSVRENKIRSLPSNPGIEKLT-QLMTLDVSHNHLEQVPEEIQHCQKLTTLN 272

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N LR+L  S+       LL+ +  R    E   AS  + D +           EL++
Sbjct: 273 LQHNELRSLPESIGEL---RLLERVGLRYNHLECLPASMAQCDNLL----------ELNI 319

Query: 204 EGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKDWPDAI 261
           EG N+  +P  +     +++ L +SRN  +  PP       S+Q+L +  N+I   P  I
Sbjct: 320 EGNNIVQLPEGLLAHLRKLSSLVVSRNYFRAFPPGGPQQFTSIQSLNMDHNQISKIPFGI 379

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 320
            +  S L+ L + +N L  +P D  K   +L  L+L  N +  LP++     L +L+ L 
Sbjct: 380 FSRASHLAKLNMKDNQLASLPPD-IKSWEVLVELNLGTNQLTKLPDD--VEHLVNLEVLI 436

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L   QL+  P  I  L++L++LDL +N L+ +P     L+ L  L +  N ++ LP  +G
Sbjct: 437 LSNNQLKRIPPTIQELKKLQLLDLEENHLECLPLEIGQLSELQRLIVQSNRLTELPRTIG 496

Query: 381 LLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           +L+ SL  L +  N L+ +   I D      L YL D
Sbjct: 497 MLQ-SLIHLAVGENDLQRLPPEIGDLHKLETL-YLND 531



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 24/172 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L+++ N+++ +   + +  + L +L    N L  +P  I S   L+ L+L  N++  
Sbjct: 362 IQSLNMDHNQISKIPFGIFSRASHLAKLNMKDNQLASLPPDIKSWEVLVELNLGTNQLTK 421

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RL 116
           +P  +    +L    + NN L  +P  + +L KL  LDL  N L+   +E  QL    RL
Sbjct: 422 LPDDVEHLVNLEVLILSNNQLKRIPPTIQELKKLQLLDLEENHLECLPLEIGQLSELQRL 481

Query: 117 SV--------------------LDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
            V                    L +  N L  LPPEIG +  L  L L  NP
Sbjct: 482 IVQSNRLTELPRTIGMLQSLIHLAVGENDLQRLPPEIGDLHKLETLYLNDNP 533


>gi|260806259|ref|XP_002598002.1| hypothetical protein BRAFLDRAFT_134756 [Branchiostoma floridae]
 gi|229283272|gb|EEN54014.1| hypothetical protein BRAFLDRAFT_134756 [Branchiostoma floridae]
          Length = 489

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 200/482 (41%), Gaps = 100/482 (20%)

Query: 13  VLSNNL-------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
           VLSNN        I     L EL    NLL  +P+ I +L  L R+++  N++ ++P  I
Sbjct: 28  VLSNNRLTSIPKEIGQLQKLRELNLDHNLLTQLPQAITTLPNLQRINVSYNKLEALPDGI 87

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 124
           S   +L    +  N L +LP  +G+L +L  L +  N+          L  +  LDLS N
Sbjct: 88  SRLKNLQYLDLSWNGLESLPDGVGELEQLTCLHITGNRFTSVPDTIMNLSNIEKLDLSRN 147

Query: 125 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 184
            +S LP  + ++  L+ + +TGNPL                 Y  +      D   S   
Sbjct: 148 RISRLPLTLSRLAKLKDMNITGNPL----------------TYPSTDFENLTDVRLSNFL 191

Query: 185 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 244
            + + +  ++      + L G  L+++P+E+++A ++ +L LS N +  +P E+     L
Sbjct: 192 LNFLGLKPKVVNGFLTIDLNGKGLTSVPAEVFDATDVERLVLSNNRLTSIPEEIGQLQKL 251

Query: 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR--------------QVPSDGFKDIP 290
           + L L  N +   P  I ++L +L  + + +N L                VP++ FK IP
Sbjct: 252 RELKLKNNLLTQLPQVI-STLPNLQHIDVTDNKLETLPGGISRLQLHELYVPNNRFKKIP 310

Query: 291 -------MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ----- 337
                   L    + YN +   P+    S L  L+++++ R Q  E P  +L+LQ     
Sbjct: 311 EEVCSLLQLNTFYVGYNPLKCFPDK--ISQLTGLRKMHMSRCQFDEFPRQVLQLQGLEEL 368

Query: 338 ---------------------------------------------QLRILDLSQNSLQSI 352
                                                        QLR LD+  N   S+
Sbjct: 369 YMADWAWEGKPSPVPEGIGRLKNLQVLDLRESGLECLPDSVGELVQLRYLDIKGNRFTSV 428

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVL 412
           PE   NL+++ +L LS N IS LP  L  L   L+ + + GNPL      +  +GT A++
Sbjct: 429 PEQVMNLSNIKKLILSHNRISCLPLNLSRLA-QLEDMNITGNPLTYPPPDVRKKGTAAIM 487

Query: 413 KY 414
            +
Sbjct: 488 DF 489



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 26/153 (16%)

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           +DLS   +  +P E+     ++ L+LS N++   P  I   L  L  L LD+N L Q+P 
Sbjct: 4   IDLSGKGLTSVPAEVFDATDIECLVLSNNRLTSIPKEI-GQLQKLRELNLDHNLLTQLPQ 62

Query: 284 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
                +P LQ +++SYN                        +L   P  I RL+ L+ LD
Sbjct: 63  -AITTLPNLQRINVSYN------------------------KLEALPDGISRLKNLQYLD 97

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           LS N L+S+P+G   L  LT L ++ N  +++P
Sbjct: 98  LSWNGLESLPDGVGELEQLTCLHITGNRFTSVP 130


>gi|410917031|ref|XP_003971990.1| PREDICTED: leucine-rich repeat protein SHOC-2-like isoform 2
           [Takifugu rubripes]
          Length = 536

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 170/380 (44%), Gaps = 63/380 (16%)

Query: 49  IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 108
           +RLDL +  I  +P+SI     LAE Y+ +N L +LPAELG LS L T            
Sbjct: 103 MRLDLSKRSIHMLPTSIKELTQLAELYLYSNKLQSLPAELGCLSSLVT------------ 150

Query: 109 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
                     L LS NSL+ LP  +  +  L+ L L  N LR +         PA++  L
Sbjct: 151 ----------LALSENSLTSLPDSLDSLKKLQMLDLRHNKLREI---------PAVVYRL 191

Query: 169 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
            +           TT E  I   ++L++    LS+    +  +P+EI     I +L L  
Sbjct: 192 TTLTTLYLRFNRITTVEKDIRHLSKLTM----LSIRENKIKQLPAEIGNLASINRLGLRY 247

Query: 229 NSIQELPPELSSC------------------------ASLQTLILSRNKIKDWPDAILTS 264
           N +  +P  L+ C                          L +L L+RN  + +P    + 
Sbjct: 248 NRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQ 307

Query: 265 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRR 323
            S++  L +++N + ++P   F    +L  L++  N + SLP +  F +   + EL L  
Sbjct: 308 FSTIYSLNMEHNCINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD--FGTWTSMVELNLAT 365

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            QL + P D+  L  L +L LS N L+ +P G  NL  L ELDL +N +  LP E+  L+
Sbjct: 366 NQLTKIPEDVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLK 425

Query: 384 PSLQALRLDGNPLRSIRRTI 403
             LQ L L  N L ++ R I
Sbjct: 426 -DLQKLVLTNNQLTTLPRGI 444



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 202/421 (47%), Gaps = 27/421 (6%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   T L EL    N L  +P  +G LS L+ L L +N + S+P S+     L    + +
Sbjct: 119 IKELTQLAELYLYSNKLQSLPAELGCLSSLVTLALSENSLTSLPDSLDSLKKLQMLDLRH 178

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  +PA + +L+ L TL L  N++     +   L +L++L +  N +  LP EIG + 
Sbjct: 179 NKLREIPAVVYRLTTLTTLYLRFNRITTVEKDIRHLSKLTMLSIRENKIKQLPAEIGNLA 238

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMA--- 191
           ++ +L L  N L  +  SL        L       S LPE   S  S  K   +T+A   
Sbjct: 239 SINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLS--SLVKLTSLTLARNC 296

Query: 192 ---------TRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSRNSIQELPPELSSC 241
                    ++ S T   L++E   ++ IP  I+   ++ +KL++  N +  LP +  + 
Sbjct: 297 FQSYPVGGPSQFS-TIYSLNMEHNCINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTW 355

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 300
            S+  L L+ N++   P+ +   L SL  L L NN L+++P  G  ++  L+ LDL  N 
Sbjct: 356 TSMVELNLATNQLTKIPEDV-CGLVSLEVLILSNNLLKKLP-HGIGNLRKLRELDLEENK 413

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
           +  LP     + L  LQ+L L   QL   P  I  L  L  L L +N LQ++PE    L 
Sbjct: 414 LECLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLQNLPEEIGTLE 471

Query: 361 SLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           +L EL L+DN N+ +LP EL L    L  + ++  PL  +   I+  G   ++++LK + 
Sbjct: 472 NLEELYLNDNPNLHSLPFELALCS-KLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 530

Query: 420 P 420
           P
Sbjct: 531 P 531



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N +  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 314 LNMEHNCINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 373

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            + G  SL    + NN L  LP  +G L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 374 DVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLT 433

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L+ L
Sbjct: 434 NNQLTTLPRGIGHLTNLTHLGLGENLLQNL 463



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 26/183 (14%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +P+ I E  ++ +L L  N +Q LP EL   +SL TL LS N +   
Sbjct: 102 SMRLDLSKRSIHMLPTSIKELTQLAELYLYSNKLQSLPAELGCLSSLVTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L SL  L  L L +N LR++P+  ++   +  +      I ++ +           
Sbjct: 162 PDS-LDSLKKLQMLDLRHNKLREIPAVVYRLTTLTTLYLRFNRITTVEK----------- 209

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
                         DI  L +L +L + +N ++ +P    NL S+  L L  N +SA+P 
Sbjct: 210 --------------DIRHLSKLTMLSIRENKIKQLPAEIGNLASINRLGLRYNRLSAIPR 255

Query: 378 ELG 380
            L 
Sbjct: 256 SLA 258


>gi|256072891|ref|XP_002572767.1| shoc2 [Schistosoma mansoni]
 gi|360043065|emb|CCD78477.1| putative shoc2 [Schistosoma mansoni]
          Length = 532

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 184/430 (42%), Gaps = 67/430 (15%)

Query: 2   SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 61
           ++LD+   +L  L  ++      L EL    N L  +P  IG+L  L  L + +N +  +
Sbjct: 105 TRLDLTKGQLHFLPPSIRDVAHHLKELYLYCNKLVNLPNEIGTLFALEILMVQENSLSDL 164

Query: 62  PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 120
           P +++ C  L    + +N L  +P  + KL  L  L L  N+++    E   L +L VL 
Sbjct: 165 PETLAQCTQLRVLDIRHNKLCEIPQVVYKLHNLTHLFLRFNRIRVVDEEIKYLTKLQVLS 224

Query: 121 LSNNSLSGLP--PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           L  N +  LP  P IG++T L  L ++ N L  L                         S
Sbjct: 225 LRENKIHTLPADPGIGQLTNLITLDVSHNHLEQL-------------------------S 259

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E     + L T           LSL+   L ++P+ I +   +  + L  N ++ LP  L
Sbjct: 260 EKIGHCQKLCT-----------LSLQHNELRSLPNTIGDLKMLENIGLKYNHLESLPDSL 308

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           + C +L  L +  N I   P+ +LT L  +SC+ L  N     PS G +    +Q L++ 
Sbjct: 309 ALCTNLLELNIEGNNIWQLPEGLLTHLKKVSCVTLSRNYFNIFPSGGPQQFTSIQSLNME 368

Query: 299 YN-------------------------IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
           YN                         I + P  P   S   L EL +   QL + P DI
Sbjct: 369 YNQITRIPFGIFSRASNLTKLNMKDNQIGAFP--PDIKSWTSLVELNVGTNQLTKLPDDI 426

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
             L  L +L LS N L+ IP   + L  L  LDL +N++ +LPP++G L   LQ L +  
Sbjct: 427 EYLINLEVLILSNNQLKQIPVTIRELQKLQVLDLEENHLESLPPDIGYL-GELQRLVVQS 485

Query: 394 NPLRSIRRTI 403
           N L S+ R I
Sbjct: 486 NRLTSLPREI 495



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 204/428 (47%), Gaps = 38/428 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  NKL  L N  I +   L  L+  +N L+ +PET+   ++L  LD+  N++  
Sbjct: 128 LKELYLYCNKLVNLPNE-IGTLFALEILMVQENSLSDLPETLAQCTQLRVLDIRHNKLCE 186

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS--- 117
           IP  +    +L   ++  N +  +  E+  L+KL  L L  N++     +    +L+   
Sbjct: 187 IPQVVYKLHNLTHLFLRFNRIRVVDEEIKYLTKLQVLSLRENKIHTLPADPGIGQLTNLI 246

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL----LKYLR-SRL 172
            LD+S+N L  L  +IG    L  L L  N LR+L +++  G    L    LKY     L
Sbjct: 247 TLDVSHNHLEQLSEKIGHCQKLCTLSLQHNELRSLPNTI--GDLKMLENIGLKYNHLESL 304

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSI 231
           P            D + + T L     EL++EG N+  +P  +     +++ + LSRN  
Sbjct: 305 P------------DSLALCTNLL----ELNIEGNNIWQLPEGLLTHLKKVSCVTLSRNYF 348

Query: 232 QELP---PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
              P   P+     S+Q+L +  N+I   P  I +  S+L+ L + +N +   P D  K 
Sbjct: 349 NIFPSGGPQ--QFTSIQSLNMEYNQITRIPFGIFSRASNLTKLNMKDNQIGAFPPD-IKS 405

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
              L  L++  N +  LP++  +  L +L+ L L   QL++ P  I  LQ+L++LDL +N
Sbjct: 406 WTSLVELNVGTNQLTKLPDDIEY--LINLEVLILSNNQLKQIPVTIRELQKLQVLDLEEN 463

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
            L+S+P     L  L  L +  N +++LP E+G L  +L  L +  N L+SI   I+   
Sbjct: 464 HLESLPPDIGYLGELQRLVVQSNRLTSLPREIGRLY-NLIYLAVGENELQSIPNEIVSTS 522

Query: 408 TKAVLKYL 415
           T     Y+
Sbjct: 523 TGLFQSYI 530


>gi|410917029|ref|XP_003971989.1| PREDICTED: leucine-rich repeat protein SHOC-2-like isoform 1
           [Takifugu rubripes]
          Length = 582

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 194/406 (47%), Gaps = 43/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L   L    + L  L  S+N L  +P+++ SL +L  LDL  N++  
Sbjct: 125 LAELYLYSNKLQSLPAEL-GCLSSLVTLALSENSLTSLPDSLDSLKKLQMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP+ +    +L   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPAVVYRLTTLTTLYLRFNRITTVEKDIRHLSKLTMLSIRENKIKQLPAEIGELCSLVTL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L                      LPE   + 
Sbjct: 244 DVAHNQLEHLPKEIGNCTKITNLDLQHNELLD--------------------LPETIGNL 283

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-L 238
           AS  +                L L    LSAIP  + +  E+ +L+L  N+I  LP   L
Sbjct: 284 ASINR----------------LGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNCINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVCGLVSLEVLILSNNLLKKLPHGIG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N +  LP E+  L+  LQ L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENKLECLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 188/396 (47%), Gaps = 28/396 (7%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N +  + + I  LS+L  L + +N+I  +P+ I   CSL    + +N L  LP E+G  +
Sbjct: 202 NRITTVEKDIRHLSKLTMLSIRENKIKQLPAEIGELCSLVTLDVAHNQLEHLPKEIGNCT 261

Query: 93  KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
           K+  LDL  N+L +       L  ++ L L  N LS +P  + K   L +L L  N +  
Sbjct: 262 KITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISV 321

Query: 152 ----LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 207
               L SSLV   +  L +      P    S+ ST                  L++E   
Sbjct: 322 LPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTI---------------YSLNMEHNC 366

Query: 208 LSAIPSEIWEAGEI-TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
           ++ IP  I+   ++ +KL++  N +  LP +  +  S+  L L+ N++   P+ +   L 
Sbjct: 367 INKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-CGLV 425

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
           SL  L L NN L+++P  G  ++  L+ LDL  N +  LP     + L  LQ+L L   Q
Sbjct: 426 SLEVLILSNNLLKKLP-HGIGNLRKLRELDLEENKLECLPNE--IAYLKDLQKLVLTNNQ 482

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELGLLEP 384
           L   P  I  L  L  L L +N LQ++PE    L +L EL L+DN N+ +LP EL L   
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLQNLPEEIGTLENLEELYLNDNPNLHSLPFELALCS- 541

Query: 385 SLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            L  + ++  PL  +   I+  G   ++++LK + P
Sbjct: 542 KLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGP 577



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +P+ I E  ++ +L L  N +Q LP EL   +SL TL LS N +   
Sbjct: 102 SMRLDLSKRSIHMLPTSIKELTQLAELYLYSNKLQSLPAELGCLSSLVTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L SL  L  L L +N LR++P+  ++   +  +      I ++ ++     L  L 
Sbjct: 162 PDS-LDSLKKLQMLDLRHNKLREIPAVVYRLTTLTTLYLRFNRITTVEKD--IRHLSKLT 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCSLVTLDVAHNQLEHLPKEIGNCTKITNLDLQHNELLDLPE 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  S+  L L  N L +I R++
Sbjct: 279 TIGNL-ASINRLGLRYNRLSAIPRSL 303



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N +  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 360 LNMEHNCINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            + G  SL    + NN L  LP  +G L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 420 DVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLT 479

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L+ L
Sbjct: 480 NNQLTTLPRGIGHLTNLTHLGLGENLLQNL 509


>gi|326926190|ref|XP_003209287.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like [Meleagris gallopavo]
          Length = 565

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 192/394 (48%), Gaps = 21/394 (5%)

Query: 41  TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY-MGNNALSALPAELGKLSKLGTLDL 99
            I +L  L +L L+Q  +  IP  I     L E   + +N L  LP E+  L KL  + L
Sbjct: 142 VISNLQSLHQLRLYQINLHEIPVQICKYLHLIELLGLSDNNLQCLPKEIVNLKKLKEIYL 201

Query: 100 HSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
            +N+ +++ +E C+ + L ++DL  N +S +P EIG +T L KL L  N L ++  +L +
Sbjct: 202 KNNRFEKFPIELCKNVSLEIIDLEQNLISHIPEEIGSLTNLVKLFLAFNNLSSIPPTLQH 261

Query: 159 GPTPALLKYLRS---RLPE-----NEDSEASTTKEDLITM-ATRLSVTS-KELSLEGMNL 208
               A+L    +   +LP       E SE   +   L  + A   S TS   L L    L
Sbjct: 262 CQKLAVLDLSHNPLHKLPPVLNSLTEKSELGLSDNSLEELPAQTGSWTSLTHLYLRNSGL 321

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
             +         +  LDLS N   E+P  + S  +L+ L L  N+I++ P A +  L++L
Sbjct: 322 HRVHMSFTSLTSVRVLDLSENCFDEIPKGICSMKNLEILNLDDNQIQEIP-AEIQELTNL 380

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN----IASLPENPPFSSLPHLQELYLRRM 324
            CL L  N     P + F  +  L+ L L  N    + SLPE+     L +L+EL++   
Sbjct: 381 KCLSLSKNQFNNFPVEIFL-VGSLEKLYLGQNKGVKLTSLPED--IIKLQNLKELHIENN 437

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
            L   P  +  L  LRILD   N L+ +PE    +  L +L L +N +S+LP +L  L+ 
Sbjct: 438 CLEYLPPAVGSLTHLRILDCHNNLLKKLPESLGQMQGLQQLLLQNNQLSSLPEDLNSLK- 496

Query: 385 SLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
            LQ + +DGNP+      +  +GT A+L+YL  K
Sbjct: 497 QLQVILVDGNPMTDPPIELCCQGTSAILQYLWQK 530



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 174/383 (45%), Gaps = 44/383 (11%)

Query: 29  IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 88
           +A+K+L   +P  + SL  L  L + +N I++IP  I    ++   Y+ +N +  +  EL
Sbjct: 61  LANKHL-QIIPPEVFSLEHLEELHMEKNLIVNIPKEIKLLKNMKVLYLDHNRIRDICDEL 119

Query: 89  GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL-LT 145
           G L  + +LDL +N L      V +    L  L L   +L  +P +I K   L +LL L+
Sbjct: 120 GMLKSILSLDLSNNPLSYSSLLVISNLQSLHQLRLYQINLHEIPVQICKYLHLIELLGLS 179

Query: 146 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 205
            N L+ L   +VN      LK L+    +N   E        I +   +S+  + + LE 
Sbjct: 180 DNNLQCLPKEIVN------LKKLKEIYLKNNRFEKFP-----IELCKNVSL--EIIDLEQ 226

Query: 206 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 265
             +S IP EI     + KL L+ N++  +PP L  C  L  L LS N +   P  +L SL
Sbjct: 227 NLISHIPEEIGSLTNLVKLFLAFNNLSSIPPTLQHCQKLAVLDLSHNPLHKLP-PVLNSL 285

Query: 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQ 325
           +  S L L +N L ++P+                      +   ++SL HL   YLR   
Sbjct: 286 TEKSELGLSDNSLEELPA----------------------QTGSWTSLTHL---YLRNSG 320

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L         L  +R+LDLS+N    IP+G  ++ +L  L+L DN I  +P E+  L  +
Sbjct: 321 LHRVHMSFTSLTSVRVLDLSENCFDEIPKGICSMKNLEILNLDDNQIQEIPAEIQEL-TN 379

Query: 386 LQALRLDGNPLRSIRRTILDRGT 408
           L+ L L  N   +    I   G+
Sbjct: 380 LKCLSLSKNQFNNFPVEIFLVGS 402



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 110/224 (49%), Gaps = 29/224 (12%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           + L   +L  IP E++    + +L + +N I  +P E+    +++ L L  N+I+D  D 
Sbjct: 59  IDLANKHLQIIPPEVFSLEHLEELHMEKNLIVNIPKEIKLLKNMKVLYLDHNRIRDICDE 118

Query: 261 ILTSLSSLSCLKLDNNPL------------------------RQVPSDGFKDIPMLQILD 296
            L  L S+  L L NNPL                         ++P    K + ++++L 
Sbjct: 119 -LGMLKSILSLDLSNNPLSYSSLLVISNLQSLHQLRLYQINLHEIPVQICKYLHLIELLG 177

Query: 297 LS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           LS  N+  LP+     +L  L+E+YL+  +  + P ++ +   L I+DL QN +  IPE 
Sbjct: 178 LSDNNLQCLPKE--IVNLKKLKEIYLKNNRFEKFPIELCKNVSLEIIDLEQNLISHIPEE 235

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
             +LT+L +L L+ NN+S++PP L   +  L  L L  NPL  +
Sbjct: 236 IGSLTNLVKLFLAFNNLSSIPPTLQHCQ-KLAVLDLSHNPLHKL 278



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 129/286 (45%), Gaps = 54/286 (18%)

Query: 115 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP-ALLK-----YL 168
           R+  +DL+N  L  +PPE+  +  L +L +  N        +VN P    LLK     YL
Sbjct: 55  RIFFIDLANKHLQIIPPEVFSLEHLEELHMEKN-------LIVNIPKEIKLLKNMKVLYL 107

Query: 169 RSRLPENEDSEASTTKEDL--------ITMATRLSVTS----KELSLEGMNLSAIPSEIW 216
                 +   E    K  L        ++ ++ L +++     +L L  +NL  IP +I 
Sbjct: 108 DHNRIRDICDELGMLKSILSLDLSNNPLSYSSLLVISNLQSLHQLRLYQINLHEIPVQIC 167

Query: 217 EAGEITKL-DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
           +   + +L  LS N++Q LP E+ +   L+ + L  N+ + +P  +  ++S         
Sbjct: 168 KYLHLIELLGLSDNNLQCLPKEIVNLKKLKEIYLKNNRFEKFPIELCKNVS--------- 218

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
                           L+I+DL  N I+ +PE     SL +L +L+L    L   P  + 
Sbjct: 219 ----------------LEIIDLEQNLISHIPEE--IGSLTNLVKLFLAFNNLSSIPPTLQ 260

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
             Q+L +LDLS N L  +P    +LT  +EL LSDN++  LP + G
Sbjct: 261 HCQKLAVLDLSHNPLHKLPPVLNSLTEKSELGLSDNSLEELPAQTG 306



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 67/163 (41%), Gaps = 27/163 (16%)

Query: 20  ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
            SWT LT L    + L+ +  +  SL+ +  LDL +N    IP  I    +L    + +N
Sbjct: 306 GSWTSLTHLYLRNSGLHRVHMSFTSLTSVRVLDLSENCFDEIPKGICSMKNLEILNLDDN 365

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------------------------- 114
            +  +PAE+ +L+ L  L L  NQ   + VE   +                         
Sbjct: 366 QIQEIPAEIQELTNLKCLSLSKNQFNNFPVEIFLVGSLEKLYLGQNKGVKLTSLPEDIIK 425

Query: 115 --RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
              L  L + NN L  LPP +G +T LR L    N L+ L  S
Sbjct: 426 LQNLKELHIENNCLEYLPPAVGSLTHLRILDCHNNLLKKLPES 468


>gi|66799847|ref|XP_628849.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
           AX4]
 gi|122056492|sp|Q54AX5.1|LRRA_DICDI RecName: Full=Leucine-rich repeat protein lrrA
 gi|7673365|gb|AAF66828.1| leucine-rich-repeat protein lrrA [Dictyostelium discoideum]
 gi|60462184|gb|EAL60413.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
           AX4]
          Length = 510

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 212/453 (46%), Gaps = 68/453 (15%)

Query: 27  ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 86
           EL+ S+N L  +PE IG LS++  +D  +NRI  IP  I    +L + ++ NN L   P 
Sbjct: 41  ELLLSENDLITIPEEIGKLSKVEIIDFAKNRINYIPPEIGSLATLKQLFLSNNKLFYTPI 100

Query: 87  --ELGKLSKLGTLDLHSNQLKEYCVEA--CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 142
              +G L  L  LDL SNQL +  VE   C+  L  LD+S+N L   P E GK+  L+  
Sbjct: 101 TPNIGALKNLTRLDLSSNQLDDLPVEISNCE-ALEYLDISDNQLQSFPLEFGKLYNLQVF 159

Query: 143 LLTGNPLRTLRSSLVNG----------------PTPALLKYLRS----------RLPENE 176
             + N L++L S +                   P    L  L S          +LPE  
Sbjct: 160 NCSKNSLKSLPSEISGWVKLEELNVSNNQLAFLPNQICLLGLLSTLNVGFNKLQQLPEEL 219

Query: 177 DSEASTTKEDL-----ITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
            S  S T  DL     +    +LS     K LS+  + ++ +P  +    E+ +LD+  N
Sbjct: 220 SSMVSLTNLDLKVNPPLQYVPQLSNLRQLKILSIRNLQITHLPLGLGLLSELIELDIRDN 279

Query: 230 -SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR--QVPSDGF 286
             ++E+P ++++  +LQ L L  N ++  P  +  +L +L  L L  N L    +PS+  
Sbjct: 280 PQLKEIPYDIATLINLQKLDLFGNNMRIVPREV-GNLINLQTLDLRQNKLTIDNIPSEIG 338

Query: 287 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
           K + + ++L  +  + +LP  P  +S+  L+E      QL+  PT+I  L  L  ++LS 
Sbjct: 339 KLVNLKKLLLSNNLLIALP--PEIASMKALKEFEASNNQLQAIPTEIGELSGLTKINLSG 396

Query: 347 NSLQSIPEGFKNLTSL-----------------------TELDLSDNNISALPPELGLLE 383
           N L SIP  F NL+ L                       T++DLS N ++ LP E G L 
Sbjct: 397 NKLTSIPASFGNLSELQICDLKSNEIAELPTTLDGLKSCTKIDLSHNMLTELPWEFGDL- 455

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
             L  L +  NPL      I+ +GT++++++LK
Sbjct: 456 IGLTILDVGHNPLTIPPNPIVMKGTESIIQWLK 488



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 161/347 (46%), Gaps = 39/347 (11%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           +DL +  I  +P +I G     E  +  N L  +P E+GKLSK                 
Sbjct: 20  VDLRKMNIDKLPPTI-GALQCKELLLSENDLITIPEEIGKLSK----------------- 61

Query: 111 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 170
                + ++D + N ++ +PPEIG + TL++L L+ N L     +    P    LK L +
Sbjct: 62  -----VEIIDFAKNRINYIPPEIGSLATLKQLFLSNNKLFYTPIT----PNIGALKNL-T 111

Query: 171 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
           RL      + S+ + D + +        + L +    L + P E  +   +   + S+NS
Sbjct: 112 RL------DLSSNQLDDLPVEISNCEALEYLDISDNQLQSFPLEFGKLYNLQVFNCSKNS 165

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           ++ LP E+S    L+ L +S N++   P+ I   L  LS L +  N L+Q+P +    + 
Sbjct: 166 LKSLPSEISGWVKLEELNVSNNQLAFLPNQICL-LGLLSTLNVGFNKLQQLPEE-LSSMV 223

Query: 291 MLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN-SL 349
            L  LDL  N   L   P  S+L  L+ L +R +Q+   P  +  L +L  LD+  N  L
Sbjct: 224 SLTNLDLKVN-PPLQYVPQLSNLRQLKILSIRNLQITHLPLGLGLLSELIELDIRDNPQL 282

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           + IP     L +L +LDL  NN+  +P E+G L  +LQ L L  N L
Sbjct: 283 KEIPYDIATLINLQKLDLFGNNMRIVPREVGNL-INLQTLDLRQNKL 328



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 1/146 (0%)

Query: 37  GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 96
            +P  I S+  L   +   N++ +IP+ I     L +  +  N L+++PA  G LS+L  
Sbjct: 355 ALPPEIASMKALKEFEASNNQLQAIPTEIGELSGLTKINLSGNKLTSIPASFGNLSELQI 414

Query: 97  LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
            DL SN++ E       L+  + +DLS+N L+ LP E G +  L  L +  NPL    + 
Sbjct: 415 CDLKSNEIAELPTTLDGLKSCTKIDLSHNMLTELPWEFGDLIGLTILDVGHNPLTIPPNP 474

Query: 156 LVNGPTPALLKYLRSRLPENEDSEAS 181
           +V   T +++++L+    E    + S
Sbjct: 475 IVMKGTESIIQWLKKNEKEGRKGKVS 500



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 7/107 (6%)

Query: 293 QILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           +I+DL   NI  LP  P   +L   +EL L    L   P +I +L ++ I+D ++N +  
Sbjct: 18  EIVDLRKMNIDKLP--PTIGAL-QCKELLLSENDLITIPEEIGKLSKVEIIDFAKNRINY 74

Query: 352 IPEGFKNLTSLTELDLSDNNISALP--PELGLLEPSLQALRLDGNPL 396
           IP    +L +L +L LS+N +   P  P +G L+ +L  L L  N L
Sbjct: 75  IPPEIGSLATLKQLFLSNNKLFYTPITPNIGALK-NLTRLDLSSNQL 120


>gi|86264151|gb|ABC87809.1| leucine-rich repeat protein [Penaeus monodon]
          Length = 561

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 180/403 (44%), Gaps = 42/403 (10%)

Query: 49  IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 108
           +RLDL  + I  IPSS+     L EFY+ +N L+ LP E+G L  L TL L  N L    
Sbjct: 83  LRLDLSNSSISQIPSSVHNLTHLVEFYLYSNKLTTLPPEIGCLVNLQTLGLSENSLTSLP 142

Query: 109 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN--GPTPALL 165
                L +L VLDL +N L  +P  + K+T+L  L L  N +R +   + N        L
Sbjct: 143 DTLANLEKLRVLDLRHNKLCEIPDVVYKLTSLITLYLRFNRIRVVGEDIRNLKNLITLSL 202

Query: 166 KYLRSRLPENEDSE--------ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 217
           +  + R P     E        A+    + ++      +  + L L+   L  +P  I  
Sbjct: 203 RGNKIRQPPAGIGELTGLATLDAAHNHSEHLSEEIGNCMCLQTLHLQHNELLDLPQSIGY 262

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT-------------- 263
              +T L L  N +  +P  LS C  L    +  N+I   P+ +L+              
Sbjct: 263 LRNLTCLGLKYNRLTAVPRSLSKCIHLDEFNVEGNQISQLPEGLLSSLSNLSSLTLSRNA 322

Query: 264 ----------SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 312
                       +++  + L++N + ++P   F     L  L+++YN + SLP +    S
Sbjct: 323 FNSYPVGGPSQFTNVHSINLEHNQVDRIPYGIFSRARHLTKLNMNYNGLTSLPLD--IGS 380

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             ++ EL L    L + P DI  LQ L +L LS N+L+ IP    NL  L  LDL +N +
Sbjct: 381 WQNMVELNLGTNHLTKVPDDISCLQSLEVLILSNNNLRKIPSSIGNLRKLRVLDLEENRL 440

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
             LPPE+G L+  LQ L +  N L ++ R +   G    L YL
Sbjct: 441 EGLPPEIGFLK-DLQRLIVQSNQLSALPRAL---GHLVNLTYL 479



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 164/390 (42%), Gaps = 84/390 (21%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P ++ +L+ L+   L+ N++ ++P  I    +L    +  N+L++LP  L  L KL  L
Sbjct: 95  IPSSVHNLTHLVEFYLYSNKLTTLPPEIGCLVNLQTLGLSENSLTSLPDTLANLEKLRVL 154

Query: 98  DLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
           DL  N+L E                      +P  + K+T+L  L L  N +R +   + 
Sbjct: 155 DLRHNKLCE----------------------IPDVVYKLTSLITLYLRFNRIRVVGEDIR 192

Query: 158 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 217
           N                          ++LIT           LSL G  +   P+ I E
Sbjct: 193 N-------------------------LKNLIT-----------LSLRGNKIRQPPAGIGE 216

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              +  LD + N  + L  E+ +C  LQTL L  N++ D P +I   L +L+CL L  N 
Sbjct: 217 LTGLATLDAAHNHSEHLSEEIGNCMCLQTLHLQHNELLDLPQSI-GYLRNLTCLGLKYNR 275

Query: 278 LRQVPSDGFKDIPMLQILDLSYNIASLPENP---------------PFSSLP-------- 314
           L  VP    K I + +       I+ LPE                  F+S P        
Sbjct: 276 LTAVPRSLSKCIHLDEFNVEGNQISQLPEGLLSSLSNLSSLTLSRNAFNSYPVGGPSQFT 335

Query: 315 HLQELYLRRMQLREAPTDIL-RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
           ++  + L   Q+   P  I  R + L  L+++ N L S+P    +  ++ EL+L  N+++
Sbjct: 336 NVHSINLEHNQVDRIPYGIFSRARHLTKLNMNYNGLTSLPLDIGSWQNMVELNLGTNHLT 395

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            +P ++  L+ SL+ L L  N LR I  +I
Sbjct: 396 KVPDDISCLQ-SLEVLILSNNNLRKIPSSI 424



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 138/300 (46%), Gaps = 45/300 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR---LDLHQNR 57
           + + +VEGN+++ L   L++S + L+ L  S+N  N  P  +G  S+      ++L  N+
Sbjct: 289 LDEFNVEGNQISQLPEGLLSSLSNLSSLTLSRNAFNSYP--VGGPSQFTNVHSINLEHNQ 346

Query: 58  ILSIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLR 115
           +  IP  I S    L +  M  N L++LP ++G    +  L+L +N L +   + +C   
Sbjct: 347 VDRIPYGIFSRARHLTKLNMNYNGLTSLPLDIGSWQNMVELNLGTNHLTKVPDDISCLQS 406

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L VL LSNN+L  +P  IG +  LR L L  N L  L       P    LK L+      
Sbjct: 407 LEVLILSNNNLRKIPSSIGNLRKLRVLDLEENRLEGL------PPEIGFLKDLQ------ 454

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                            RL V S +       LSA+P  +     +T L +  N++  LP
Sbjct: 455 -----------------RLIVQSNQ-------LSALPRALGHLVNLTYLSVGENNLSYLP 490

Query: 236 PELSSCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
            E+ +  SL+TL ++ N ++ + P   L   ++L  + ++N PL Q+P +     P   I
Sbjct: 491 EEIGTLESLETLYINDNPQLHNLPFE-LALCTNLQIMSIENCPLSQIPPEIVAGGPSFVI 549


>gi|456985860|gb|EMG21570.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Copenhageni str. LT2050]
          Length = 368

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 163/350 (46%), Gaps = 43/350 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI------------- 157

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 158 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 195 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 252

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L LS N 
Sbjct: 253 KNLQTLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 310

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L  +P+    L +L  L L  N ++ LP E+  L+ +LQ L L+ N   S
Sbjct: 311 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK-NLQTLYLNNNQFSS 359



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 164/345 (47%), Gaps = 40/345 (11%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+  L  +P  IG L  L RL LH N++  +P  I    +L   Y+ +N L+ LP E+ +
Sbjct: 54  SRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQ 113

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL SNQL     E  QL+ L +L L +N L+ L  +I ++  L+ L L+ N L
Sbjct: 114 LKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQL 173

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
            TL + +        LK L+S L  +E+  A+  KE  I     L V    L L    ++
Sbjct: 174 TTLPNEI------EQLKNLKS-LYLSENQFATFPKE--IGQLQNLKV----LFLNNNQIT 220

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P+EI +  ++  L LS N +  LP E+    +LQTL LS N++   P  +   L +L 
Sbjct: 221 ILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEV-GQLENLQ 279

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 329
            L L NN L+ +P +                            L +LQ L+L   QL   
Sbjct: 280 TLDLRNNQLKTLPKE-------------------------IEQLKNLQTLFLSNNQLTIL 314

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           P +I +L+ L  L L  N L ++P   + L +L  L L++N  S+
Sbjct: 315 PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 359



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 137/291 (47%), Gaps = 42/291 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS   L  LP EIGK+  L++L L  N L  L   +       LL YLRS   
Sbjct: 46  LEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL-YLRSN-- 102

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                             L+ +P EI +   +  LDL  N +  
Sbjct: 103 ---------------------------------RLTTLPKEIEQLKNLQVLDLGSNQLTV 129

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQ L L  N++      I   L +L  L L NN L  +P++  + +  L+
Sbjct: 130 LPQEIEQLKNLQLLYLHSNRLTTLSKDI-EQLQNLKSLDLSNNQLTTLPNE-IEQLKNLK 187

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L LS N  A+ P+      L +L+ L+L   Q+   P +I +L++L+ L LS N L ++
Sbjct: 188 SLYLSENQFATFPK--EIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITL 245

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P+  + L +L  LDLS N ++ LP E+G LE +LQ L L  N L+++ + I
Sbjct: 246 PKEIEQLKNLQTLDLSYNQLTILPKEVGQLE-NLQTLDLRNNQLKTLPKEI 295



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 83/176 (47%), Gaps = 25/176 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  
Sbjct: 163 LKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI 221

Query: 61  IPSSISGCCSLAEFYMGNNAL-----------------------SALPAELGKLSKLGTL 97
           +P+ I+    L   Y+ +N L                       + LP E+G+L  L TL
Sbjct: 222 LPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTL 281

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           DL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  L L  N L TL
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTL 337


>gi|359462332|ref|ZP_09250895.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
           5410]
          Length = 407

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 193/392 (49%), Gaps = 29/392 (7%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L+ +P++IGSLS+L  L L +N ++ +P ++     L    +  N L  L   LG LS+L
Sbjct: 32  LSDLPDSIGSLSQLKSLYLSENELMRLPKALGQLTQLQVLDLARNRLPILTDVLGYLSQL 91

Query: 95  GTLDLHSN---QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
            +LDL  N   +L E+     QLR   L+L++N L  LP  IGK+  L++L L+ N +  
Sbjct: 92  QSLDLTGNALVELPEFIGAFSQLR--SLNLASNQLVHLPSSIGKLKNLQELQLSYNSMAQ 149

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
               L       LL  LRS        E ++T  + I  A R     + L+L   +L  +
Sbjct: 150 WPEEL------GLLTGLRSL-------EITSTGLNEIPPAWRSLEGLESLNLSFNHLKTL 196

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P  +    ++  LDLS N + ELP  L S   L +L +  N+++  P  I  +L +L+ L
Sbjct: 197 PEWLGTLTDLRSLDLSFNQLSELPAALGSLTPLTSLDIQSNQLQSLPPQI-CNLVNLTSL 255

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL-----RRMQ 325
              NN L  +P + +  +  L  L ++ N I  LPE+     L +L++        + + 
Sbjct: 256 LAYNNQLTHLP-EAWGRLAALTTLGIAGNRIRQLPES--IGELQNLKQFIFNLDPDQPVP 312

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L+  P  +   + L  L      L+S+P     LT L  L++S NN++ LP  LG L+ +
Sbjct: 313 LQVFPAALRGCRLLEQLTFVACELRSLPPWIGELTQLKSLNVSHNNLTDLPLSLGTLD-N 371

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           L+ L L  NPLRS    + +RG  A+  YL++
Sbjct: 372 LKTLNLSNNPLRSELEVLWERGPNAIKNYLQN 403



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 118/263 (44%), Gaps = 43/263 (16%)

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LDLS+  LS LP  IG ++ L+ L L+ N L  L  +L       +L   R+RLP     
Sbjct: 25  LDLSDIGLSDLPDSIGSLSQLKSLYLSENELMRLPKALGQLTQLQVLDLARNRLP----- 79

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                  D++   ++L    + L L G  L  +P  I    ++  L+L+ N +  LP  +
Sbjct: 80  ----ILTDVLGYLSQL----QSLDLTGNALVELPEFIGAFSQLRSLNLASNQLVHLPSSI 131

Query: 239 SSCASLQTLILSRNKIKDWPD--AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
               +LQ L LS N +  WP+   +LT L SL           ++ S G  +IP      
Sbjct: 132 GKLKNLQELQLSYNSMAQWPEELGLLTGLRSL-----------EITSTGLNEIP------ 174

Query: 297 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
                      P + SL  L+ L L    L+  P  +  L  LR LDLS N L  +P   
Sbjct: 175 -----------PAWRSLEGLESLNLSFNHLKTLPEWLGTLTDLRSLDLSFNQLSELPAAL 223

Query: 357 KNLTSLTELDLSDNNISALPPEL 379
            +LT LT LD+  N + +LPP++
Sbjct: 224 GSLTPLTSLDIQSNQLQSLPPQI 246



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 54/255 (21%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++  N L  L    + + T L  L  S N L+ +P  +GSL+ L  LD+  N++ S
Sbjct: 183 LESLNLSFNHLKTLPE-WLGTLTDLRSLDLSFNQLSELPAALGSLTPLTSLDIQSNQLQS 241

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P  I    +L      NN L+ LP   G+L+ L TL +  N++++              
Sbjct: 242 LPPQICNLVNLTSLLAYNNQLTHLPEAWGRLAALTTLGIAGNRIRQ-------------- 287

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
                   LP  IG++  L++ +   +P         + P P                  
Sbjct: 288 --------LPESIGELQNLKQFIFNLDP---------DQPVPL----------------- 313

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                 +   A R     ++L+     L ++P  I E  ++  L++S N++ +LP  L +
Sbjct: 314 -----QVFPAALRGCRLLEQLTFVACELRSLPPWIGELTQLKSLNVSHNNLTDLPLSLGT 368

Query: 241 CASLQTLILSRNKIK 255
             +L+TL LS N ++
Sbjct: 369 LDNLKTLNLSNNPLR 383


>gi|418728131|ref|ZP_13286711.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777176|gb|EKR57144.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 377

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 163/350 (46%), Gaps = 43/350 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI------------- 157

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 158 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 195 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 252

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L LS N 
Sbjct: 253 KNLQTLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 310

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L  +P+    L +L  L L  N ++ LP E+  L+ +LQ L L+ N   S
Sbjct: 311 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK-NLQTLYLNNNQFSS 359



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 164/345 (47%), Gaps = 40/345 (11%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+  L  +P  IG L  L RL LH N++  +P  I    +L   Y+ +N L+ LP E+ +
Sbjct: 54  SRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQ 113

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL SNQL     E  QL+ L +L L +N L+ L  +I ++  L+ L L+ N L
Sbjct: 114 LKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQL 173

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
            TL + +        LK L+S L  +E+  A+  KE  I     L V    L L    ++
Sbjct: 174 TTLPNEIEQ------LKNLKS-LYLSENQFATFPKE--IGQLQNLKV----LFLNNNQIT 220

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P+EI +  ++  L LS N +  LP E+    +LQTL LS N++   P  +   L +L 
Sbjct: 221 ILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEV-GQLENLQ 279

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 329
            L L NN L+ +P +                            L +LQ L+L   QL   
Sbjct: 280 TLDLRNNQLKTLPKE-------------------------IEQLKNLQTLFLSNNQLTIL 314

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           P +I +L+ L  L L  N L ++P   + L +L  L L++N  S+
Sbjct: 315 PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 359



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 137/291 (47%), Gaps = 42/291 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS   L  LP EIGK+  L++L L  N L  L   +       LL YLRS   
Sbjct: 46  LEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL-YLRSN-- 102

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                             L+ +P EI +   +  LDL  N +  
Sbjct: 103 ---------------------------------RLTTLPKEIEQLKNLQVLDLGSNQLTV 129

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQ L L  N++      I   L +L  L L NN L  +P++  + +  L+
Sbjct: 130 LPQEIEQLKNLQLLYLHSNRLTTLSKDI-EQLQNLKSLDLSNNQLTTLPNE-IEQLKNLK 187

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L LS N  A+ P+      L +L+ L+L   Q+   P +I +L++L+ L LS N L ++
Sbjct: 188 SLYLSENQFATFPK--EIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITL 245

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P+  + L +L  LDLS N ++ LP E+G LE +LQ L L  N L+++ + I
Sbjct: 246 PKEIEQLKNLQTLDLSYNQLTILPKEVGQLE-NLQTLDLRNNQLKTLPKEI 295



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 83/176 (47%), Gaps = 25/176 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  
Sbjct: 163 LKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI 221

Query: 61  IPSSISGCCSLAEFYMGNNAL-----------------------SALPAELGKLSKLGTL 97
           +P+ I+    L   Y+ +N L                       + LP E+G+L  L TL
Sbjct: 222 LPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTL 281

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           DL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  L L  N L TL
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTL 337



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L  L    I     L  L  S N L  +P+ IG L  L+ L L  N++ +
Sbjct: 278 LQTLDLRNNQLKTLPKE-IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTT 336

Query: 61  IPSSISGCCSLAEFYMGNNALSA 83
           +P+ I    +L   Y+ NN  S+
Sbjct: 337 LPNEIEQLKNLQTLYLNNNQFSS 359


>gi|428175990|gb|EKX44877.1| hypothetical protein GUITHDRAFT_87300 [Guillardia theta CCMP2712]
          Length = 618

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 186/425 (43%), Gaps = 62/425 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++++D++ N++  + N  I     L   +   N L+ +PE+IG L  L  LDL  N I  
Sbjct: 227 LARVDLDSNQIGKIPNT-IGRLQSLEIFLMQNNALDSIPESIGQLKSLQELDLSDNNIQL 285

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P SI     L E  +  N++SALP E+  L++L T    SN L       C+L  L+ L
Sbjct: 286 LPLSIGSISDLTELNLSANSISALPREIVVLTRLVTFRYSSNNLLTLPSIVCKLTTLTSL 345

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPENE 176
           DL  N L+ LP    ++           PL ++   R++    P P        R+   E
Sbjct: 346 DLQENKLNSLPSNFSEL-----------PLMSINLSRNNFEIFPPPL------ERMTNLE 388

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE--ITKLDLSRNSIQEL 234
             + +  +   +       V +  + L G  +S +P  +   GE  +  ++LS+N + +L
Sbjct: 389 HIDLTDNRLTRLPFMIGRFVYATAILLGGNQVSVLPDSLGAMGEASLQVINLSKNGLFDL 448

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P  L +   L+ + LS N +++ P+  L  L  L  L LD+N L  +PS           
Sbjct: 449 PSALFNIKRLERICLSGNNLRELPNQ-LCVLKKLKELWLDHNQLTYLPSR---------- 497

Query: 295 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
                             L  L  LYL   +L+  P +++ L+ L++L LS N L+ +P 
Sbjct: 498 ---------------LGELVSLSALYLHSNRLKMIPKNLVELKGLKVLTLSGNELRELPW 542

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
            F  L+ L EL L DN   AL  E  L  P LQ L    NPL           TK V K 
Sbjct: 543 DFHRLSELEELWLDDNQFEALQLERSLF-PRLQFLTFRHNPL-----------TKEVFKR 590

Query: 415 LKDKI 419
           LK+  
Sbjct: 591 LKENF 595



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 182/399 (45%), Gaps = 22/399 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+EGN    + N ++ S T LT L  S+N L+  P  +  L+ L  L L  N+I  
Sbjct: 66  LVRLDLEGNLFETMPN-ILTSLTSLTVLNLSRNQLSDCPVHLCKLTLLEELILDHNKISV 124

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVL 119
           +P+ I  C +L  F + +NAL +LPA +    +L   DL  N L     E      L  L
Sbjct: 125 LPNKIGNCGALRHFSISHNALRSLPASIKDFKRLLNFDLSHNHLTILPAEVGMLPLLDAL 184

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +N L+ +  E+G    L  + L GN +  L         PA L  LRS    + DS 
Sbjct: 185 LLPDNMLTTIVKELGGCVNLSHIDLIGNQVTYL---------PAELGKLRSLARVDLDSN 235

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                 + I     L +      ++   L +IP  I +   + +LDLS N+IQ LP  + 
Sbjct: 236 QIGKIPNTIGRLQSLEI----FLMQNNALDSIPESIGQLKSLQELDLSDNNIQLLPLSIG 291

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           S + L  L LS N I   P  I+  L+ L   +  +N L  +PS   K +  L  LDL  
Sbjct: 292 SISDLTELNLSANSISALPREIVV-LTRLVTFRYSSNNLLTLPSIVCK-LTTLTSLDLQE 349

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N + SLP N  FS LP L  + L R      P  + R+  L  +DL+ N L  +P     
Sbjct: 350 NKLNSLPSN--FSELP-LMSINLSRNNFEIFPPPLERMTNLEHIDLTDNRLTRLPFMIGR 406

Query: 359 LTSLTELDLSDNNISALPPELGLL-EPSLQALRLDGNPL 396
               T + L  N +S LP  LG + E SLQ + L  N L
Sbjct: 407 FVYATAILLGGNQVSVLPDSLGAMGEASLQVINLSKNGL 445



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 161/363 (44%), Gaps = 56/363 (15%)

Query: 58  ILSIPSSISGCCSL-AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 115
           ++++PS I+G CS   +    +N +S + +E+G      TL  + N+L+     AC+LR 
Sbjct: 6   LIAVPSEIAGFCSQPYKVSFAHNHISTISSEIGLFENAQTLCFNDNKLESI---ACELRN 62

Query: 116 --------------------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
                                     L+VL+LS N LS  P  + K+T L +L+L  N +
Sbjct: 63  LTRLVRLDLEGNLFETMPNILTSLTSLTVLNLSRNQLSDCPVHLCKLTLLEELILDHNKI 122

Query: 150 RTLRSSLVNGPTPALLKY------LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
             L + +  G   AL  +      LRS LP +          DL      L++   E+ +
Sbjct: 123 SVLPNKI--GNCGALRHFSISHNALRS-LPASIKDFKRLLNFDL--SHNHLTILPAEVGM 177

Query: 204 EGMN---------LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
             +          L+ I  E+     ++ +DL  N +  LP EL    SL  + L  N+I
Sbjct: 178 LPLLDALLLPDNMLTTIVKELGGCVNLSHIDLIGNQVTYLPAELGKLRSLARVDLDSNQI 237

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFSSL 313
              P+ I   L SL    + NN L  +P +    +  LQ LDLS  NI  LP +    S+
Sbjct: 238 GKIPNTI-GRLQSLEIFLMQNNALDSIP-ESIGQLKSLQELDLSDNNIQLLPLS--IGSI 293

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
             L EL L    +   P +I+ L +L     S N+L ++P     LT+LT LDL +N ++
Sbjct: 294 SDLTELNLSANSISALPREIVVLTRLVTFRYSSNNLLTLPSIVCKLTTLTSLDLQENKLN 353

Query: 374 ALP 376
           +LP
Sbjct: 354 SLP 356


>gi|45656722|ref|YP_000808.1| hypothetical protein LIC10831 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084319|ref|ZP_15545182.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102944|ref|ZP_15563546.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599958|gb|AAS69445.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367259|gb|EKP22645.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433219|gb|EKP77567.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 377

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 163/350 (46%), Gaps = 43/350 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI------------- 157

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 158 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 195 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 252

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L LS N 
Sbjct: 253 KNLQTLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 310

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L  +P+    L +L  L L  N ++ LP E+  L+ +LQ L L+ N   S
Sbjct: 311 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK-NLQTLYLNNNQFSS 359



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 164/345 (47%), Gaps = 40/345 (11%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+  L  +P  IG L  L RL LH N++  +P  I    +L   Y+ +N L+ LP E+ +
Sbjct: 54  SRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQ 113

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL SNQL     E  QL+ L +L L +N L+ L  +I ++  L+ L L+ N L
Sbjct: 114 LKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQL 173

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
            TL + +        LK L+S L  +E+  A+  KE  I     L V    L L    ++
Sbjct: 174 TTLPNEIEQ------LKNLKS-LYLSENQFATFPKE--IGQLQNLKV----LFLNNNQIT 220

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P+EI +  ++  L LS N +  LP E+    +LQTL LS N++   P  +   L +L 
Sbjct: 221 ILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEV-GQLENLQ 279

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 329
            L L NN L+ +P +                            L +LQ L+L   QL   
Sbjct: 280 TLDLRNNQLKTLPKE-------------------------IEQLKNLQTLFLSNNQLTIL 314

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           P +I +L+ L  L L  N L ++P   + L +L  L L++N  S+
Sbjct: 315 PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 359



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 137/291 (47%), Gaps = 42/291 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS   L  LP EIGK+  L++L L  N L  L   +       LL YLRS   
Sbjct: 46  LEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL-YLRSN-- 102

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                             L+ +P EI +   +  LDL  N +  
Sbjct: 103 ---------------------------------RLTTLPKEIEQLKNLQVLDLGSNQLTV 129

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQ L L  N++      I   L +L  L L NN L  +P++  + +  L+
Sbjct: 130 LPQEIEQLKNLQLLYLHSNRLTTLSKDI-EQLQNLKSLDLSNNQLTTLPNE-IEQLKNLK 187

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L LS N  A+ P+      L +L+ L+L   Q+   P +I +L++L+ L LS N L ++
Sbjct: 188 SLYLSENQFATFPK--EIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITL 245

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P+  + L +L  LDLS N ++ LP E+G LE +LQ L L  N L+++ + I
Sbjct: 246 PKEIEQLKNLQTLDLSYNQLTILPKEVGQLE-NLQTLDLRNNQLKTLPKEI 295



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 83/176 (47%), Gaps = 25/176 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  
Sbjct: 163 LKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI 221

Query: 61  IPSSISGCCSLAEFYMGNNAL-----------------------SALPAELGKLSKLGTL 97
           +P+ I+    L   Y+ +N L                       + LP E+G+L  L TL
Sbjct: 222 LPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTL 281

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           DL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  L L  N L TL
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTL 337



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L  L    I     L  L  S N L  +P+ IG L  L+ L L  N++ +
Sbjct: 278 LQTLDLRNNQLKTLPKE-IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTT 336

Query: 61  IPSSISGCCSLAEFYMGNNALSA 83
           +P+ I    +L   Y+ NN  S+
Sbjct: 337 LPNEIEQLKNLQTLYLNNNQFSS 359


>gi|124007624|ref|ZP_01692328.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
 gi|123986922|gb|EAY26687.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
          Length = 440

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 178/379 (46%), Gaps = 41/379 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +     L +L  S N +  + + I  L +L +LDL  N +  +P  +     L E  +G 
Sbjct: 83  VTQLVTLQQLDLSNNNIEHLSQKIRQLKQLKKLDLQGNELAQLPPIVEQLTGLEELILGY 142

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N L+ LP  +G L++L  L++H                      NN L  LP  IGK+T+
Sbjct: 143 NYLTQLPGSVGNLTQLKVLEVH----------------------NNDLFRLPSTIGKLTS 180

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L KL L+ N L  L        T  L+   +  L  N+ S+        + MA       
Sbjct: 181 LIKLNLSYNQLSELSKM-----TENLVNLQQLNLQHNQLSQ--------LPMAIGQLTAL 227

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L L G N++ +P+ I +   +  L L  N++++LPP +    SL  L L  N ++  P
Sbjct: 228 QKLVLSGNNMNVLPANIEQLTSLKHLSLGGNTLEQLPPTICKLKSLTELFLDYNYLQQLP 287

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQ 317
             I   L  L  L+L  N L+++P++    +  L+ L+L  N+   LP  P    L  L+
Sbjct: 288 IEI-KYLKHLQKLELSYNELKELPAE-IGQLTQLKQLNLGQNLLTKLP--PEIGQLNCLE 343

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L++ + +L   P  + +L  L+   LS N L S+P    +L+ L+ L L +N ++ LP 
Sbjct: 344 NLWVYQNKLTNIPPTVGQLTALQRFMLSNNQLTSLPIEIGHLSHLSTLSLENNQLATLPL 403

Query: 378 ELGLLEPSLQALRLDGNPL 396
           E+  L   L++L+L GNP+
Sbjct: 404 EIKQLS-KLKSLQLTGNPM 421



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 168/357 (47%), Gaps = 46/357 (12%)

Query: 52  DLHQNRILSIPSS---ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 108
           +L +N ILS   +   +  C +L    + +  L  LP E+ +L  L  LDL +N ++   
Sbjct: 44  ELRENHILSCLKNNLEVLYCQTLIACDLSDKNLDRLPDEVTQLVTLQQLDLSNNNIEHLS 103

Query: 109 VEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 167
            +  QL+ L  LDL  N L+ LPP + ++T L +L+L  N L  L  S+ N         
Sbjct: 104 QKIRQLKQLKKLDLQGNELAQLPPIVEQLTGLEELILGYNYLTQLPGSVGN--------- 154

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
                                   T+L V    L +   +L  +PS I +   + KL+LS
Sbjct: 155 -----------------------LTQLKV----LEVHNNDLFRLPSTIGKLTSLIKLNLS 187

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            N + EL     +  +LQ L L  N++   P AI   L++L  L L  N +  +P++  +
Sbjct: 188 YNQLSELSKMTENLVNLQQLNLQHNQLSQLPMAI-GQLTALQKLVLSGNNMNVLPAN-IE 245

Query: 288 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
            +  L+ L L  N +  LP  P    L  L EL+L    L++ P +I  L+ L+ L+LS 
Sbjct: 246 QLTSLKHLSLGGNTLEQLP--PTICKLKSLTELFLDYNYLQQLPIEIKYLKHLQKLELSY 303

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           N L+ +P     LT L +L+L  N ++ LPPE+G L   L+ L +  N L +I  T+
Sbjct: 304 NELKELPAEIGQLTQLKQLNLGQNLLTKLPPEIGQLN-CLENLWVYQNKLTNIPPTV 359



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 114/230 (49%), Gaps = 15/230 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L+++ N+L+ L    I   T L +L+ S N +N +P  I  L+ L  L L  N +  
Sbjct: 204 LQQLNLQHNQLSQLPMA-IGQLTALQKLVLSGNNMNVLPANIEQLTSLKHLSLGGNTLEQ 262

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P +I    SL E ++  N L  LP E+  L  L  L+L  N+LKE   E  QL +L  L
Sbjct: 263 LPPTICKLKSLTELFLDYNYLQQLPIEIKYLKHLQKLELSYNELKELPAEIGQLTQLKQL 322

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L  N L+ LPPEIG++  L  L +  N L  +  ++  G   AL +++ S    N+ + 
Sbjct: 323 NLGQNLLTKLPPEIGQLNCLENLWVYQNKLTNIPPTV--GQLTALQRFMLSN---NQLTS 377

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                  L  ++T        LSLE   L+ +P EI +  ++  L L+ N
Sbjct: 378 LPIEIGHLSHLST--------LSLENNQLATLPLEIKQLSKLKSLQLTGN 419



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 23/149 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL++  N+L  L    I   T L +L   +NLL  +P  IG L+ L  L ++QN++ +
Sbjct: 296 LQKLELSYNELKELPAE-IGQLTQLKQLNLGQNLLTKLPPEIGQLNCLENLWVYQNKLTN 354

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IP ++    +L  F + NN L++LP E+G LS                       LS L 
Sbjct: 355 IPPTVGQLTALQRFMLSNNQLTSLPIEIGHLS----------------------HLSTLS 392

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L NN L+ LP EI +++ L+ L LTGNP+
Sbjct: 393 LENNQLATLPLEIKQLSKLKSLQLTGNPM 421


>gi|418712104|ref|ZP_13272849.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791371|gb|EKR85047.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|455791547|gb|EMF43354.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 377

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 163/350 (46%), Gaps = 43/350 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI------------- 157

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 158 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 195 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 252

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L LS N 
Sbjct: 253 KNLQTLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 310

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L  +P+    L +L  L L  N ++ LP E+  L+ +LQ L L+ N   S
Sbjct: 311 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK-NLQTLYLNNNQFSS 359



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 165/349 (47%), Gaps = 40/349 (11%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+  L  +P  IG L  L RL LH N++  +P  I    +L   Y+ +N L+ LP E+ +
Sbjct: 54  SRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQ 113

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL SNQL     E  QL+ L +L L +N L+ L  +I ++  L+ L L+ N L
Sbjct: 114 LKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQL 173

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
            TL + +        LK L+S L  +E+  A+  KE  I     L V    L L    ++
Sbjct: 174 TTLPNEIEQ------LKNLKS-LYLSENQFATFPKE--IGQLQNLKV----LFLNNNQIT 220

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P+EI +  ++  L LS N +  LP E+    +LQTL LS N++   P  +   L +L 
Sbjct: 221 ILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEV-GQLENLQ 279

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 329
            L L NN L+ +P +                            L +LQ L+L   QL   
Sbjct: 280 TLDLRNNQLKTLPKE-------------------------IEQLKNLQTLFLSNNQLTIL 314

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           P +I +L+ L  L L  N L ++P   + L +L  L L++N  S+   E
Sbjct: 315 PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSSQEKE 363



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 137/291 (47%), Gaps = 42/291 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS   L  LP EIGK+  L++L L  N L  L   +       LL YLRS   
Sbjct: 46  LEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL-YLRSN-- 102

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                             L+ +P EI +   +  LDL  N +  
Sbjct: 103 ---------------------------------RLTTLPKEIEQLKNLQVLDLGSNQLTV 129

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQ L L  N++      I   L +L  L L NN L  +P++  + +  L+
Sbjct: 130 LPQEIEQLKNLQLLYLHSNRLTTLSKDI-EQLQNLKSLDLSNNQLTTLPNE-IEQLKNLK 187

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L LS N  A+ P+      L +L+ L+L   Q+   P +I +L++L+ L LS N L ++
Sbjct: 188 SLYLSENQFATFPK--EIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITL 245

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P+  + L +L  LDLS N ++ LP E+G LE +LQ L L  N L+++ + I
Sbjct: 246 PKEIEQLKNLQTLDLSYNQLTILPKEVGQLE-NLQTLDLRNNQLKTLPKEI 295



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 83/176 (47%), Gaps = 25/176 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  
Sbjct: 163 LKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI 221

Query: 61  IPSSISGCCSLAEFYMGNNAL-----------------------SALPAELGKLSKLGTL 97
           +P+ I+    L   Y+ +N L                       + LP E+G+L  L TL
Sbjct: 222 LPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTL 281

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           DL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  L L  N L TL
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTL 337



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 6/114 (5%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N L  +P+ +G L  L  LDL  N++ ++P  I    +L   ++ NN L+ LP E+GK
Sbjct: 261 SYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGK 320

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           L  L  L L  NQL     E  QL+ L  L L+NN  S    E      +RKLL
Sbjct: 321 LKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSSQEKE-----KIRKLL 369


>gi|418688837|ref|ZP_13249972.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361995|gb|EJP17948.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 377

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 163/350 (46%), Gaps = 43/350 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDI------------- 157

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 158 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 195 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 252

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L LS N 
Sbjct: 253 KNLQTLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 310

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L  +P+    L +L  L L  N ++ LP E+  L+ +LQ L L+ N   S
Sbjct: 311 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK-NLQTLYLNNNQFSS 359



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 164/345 (47%), Gaps = 40/345 (11%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+  L  +P  IG L  L RL LH N++  +P  I    +L   Y+ +N L+ LP E+ +
Sbjct: 54  SRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQ 113

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL SNQL     E  QL+ L +L L +N L+ L  +I ++  L+ L L+ N L
Sbjct: 114 LKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQL 173

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
            TL + +        LK L+S L  +E+  A+  KE  I     L V    L L    ++
Sbjct: 174 TTLPNEIEQ------LKNLKS-LYLSENQFATFPKE--IGQLQNLKV----LFLNNNQIT 220

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P+EI +  ++  L LS N +  LP E+    +LQTL LS N++   P  +   L +L 
Sbjct: 221 ILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEV-GQLENLQ 279

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 329
            L L NN L+ +P +                            L +LQ L+L   QL   
Sbjct: 280 TLDLRNNQLKTLPKE-------------------------IEQLKNLQTLFLSNNQLTIL 314

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           P +I +L+ L  L L  N L ++P   + L +L  L L++N  S+
Sbjct: 315 PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 359



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 137/291 (47%), Gaps = 42/291 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS   L  LP EIGK+  L++L L  N L  L   +       LL YLRS   
Sbjct: 46  LEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL-YLRSN-- 102

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                             L+ +P EI +   +  LDL  N +  
Sbjct: 103 ---------------------------------RLTTLPKEIEQLKNLQVLDLGSNQLTV 129

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQ L L  N++      I   L +L  L L NN L  +P++  + +  L+
Sbjct: 130 LPQEIEQLKNLQLLYLRSNRLTTLSKDI-EQLQNLKSLDLSNNQLTTLPNE-IEQLKNLK 187

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L LS N  A+ P+      L +L+ L+L   Q+   P +I +L++L+ L LS N L ++
Sbjct: 188 SLYLSENQFATFPK--EIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITL 245

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P+  + L +L  LDLS N ++ LP E+G LE +LQ L L  N L+++ + I
Sbjct: 246 PKEIEQLKNLQTLDLSYNQLTILPKEVGQLE-NLQTLDLRNNQLKTLPKEI 295



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 83/176 (47%), Gaps = 25/176 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  
Sbjct: 163 LKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI 221

Query: 61  IPSSISGCCSLAEFYMGNNAL-----------------------SALPAELGKLSKLGTL 97
           +P+ I+    L   Y+ +N L                       + LP E+G+L  L TL
Sbjct: 222 LPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTL 281

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           DL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  L L  N L TL
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTL 337



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 115/253 (45%), Gaps = 17/253 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+LTVL    I     L  L    N L  + + I  L  L  LDL  N++ ++P+
Sbjct: 120 LDLGSNQLTVLPQE-IEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPN 178

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I    +L   Y+  N  +  P E+G+L  L  L L++NQ+     E  +L +L  L LS
Sbjct: 179 EIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLS 238

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAS 181
           +N L  LP EI ++  L+ L L+ N L  L   +        L+ L++  L  N+     
Sbjct: 239 DNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEV------GQLENLQTLDLRNNQLKTLP 292

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
              E L  + T        L L    L+ +P EI +   +  L L  N +  LP E+   
Sbjct: 293 KEIEQLKNLQT--------LFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344

Query: 242 ASLQTLILSRNKI 254
            +LQTL L+ N+ 
Sbjct: 345 KNLQTLYLNNNQF 357



 Score = 41.2 bits (95), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L  L    I     L  L  S N L  +P+ IG L  L+ L L  N++ +
Sbjct: 278 LQTLDLRNNQLKTLPKE-IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTT 336

Query: 61  IPSSISGCCSLAEFYMGNNALSA 83
           +P+ I    +L   Y+ NN  S+
Sbjct: 337 LPNEIEQLKNLQTLYLNNNQFSS 359


>gi|395843935|ref|XP_003794726.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Otolemur garnettii]
          Length = 635

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 185/414 (44%), Gaps = 60/414 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN L +L   ++ + T L E+   +N  N  P  +  L +L  +DL +NR+ +IP 
Sbjct: 215 LGLTGNHLRLLPKEVV-NLTKLREIYLGQNQFNAFPAELCVLDQLRTIDLDKNRVAAIPE 273

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            +    +L + Y+ +N+L  LP  LG+                         +SVLD+S+
Sbjct: 274 EVGHLAALHKLYVAHNSLPCLPEALGRCGG----------------------MSVLDVSH 311

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N L G+P  + ++  + ++ L+GN L  +   L +  +  LL YL         S+A   
Sbjct: 312 NLLRGIPHGMAELAEMTEVGLSGNRLDKVPHLLCHWSSLHLL-YL---------SDAGLR 361

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
           +   +  + R  V  + L L    L   P ++    ++  L L  N I +LP EL S + 
Sbjct: 362 R---LRGSFRRLVNLRFLDLSRNLLDHCPRQLCALRKLEVLSLDDNRIGQLPSELCSLSK 418

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 303
           L+ L L+ N+   +P+ +  SL SL  L +                      D    +  
Sbjct: 419 LKILGLTGNEFVSFPEEVF-SLESLEKLYIGQ--------------------DQGSKLTY 457

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
           +PEN     L  L+ELY+    L   P  +  +  L +LD   N L+ +P+   +  +L 
Sbjct: 458 VPEN--IGKLQSLKELYIENNYLETLPAALGSMPHLEVLDCRHNLLKVLPDAICHAQALR 515

Query: 364 ELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           E  L DN ++ LP +L  L  +L+ L L  NP+    + +  +GT+AV  YLK+
Sbjct: 516 EFLLDDNLLTHLPEDLDFLV-NLKVLTLSENPMEEPPKDVCAQGTEAVWDYLKE 568



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 161/383 (42%), Gaps = 63/383 (16%)

Query: 56  NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQ 113
           N+I  +P  I    ++   Y+ NN L +L  +LG LS+L  LDL  + +      V +  
Sbjct: 126 NQIEELPPDIRHLQNIVTLYLHNNKLRSLCPQLGLLSRLQRLDLSHSSIPAAALPVLSRL 185

Query: 114 LRLSVLDLSNNSLSGLPPEIGK-MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 172
             L  L L +  L+ LP  I K +  L  L LTGN LR L   +VN              
Sbjct: 186 RALRELRLYHAGLAELPAVICKNLHHLELLGLTGNHLRLLPKEVVN-------------- 231

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
                              T+L    +E+ L     +A P+E+    ++  +DL +N + 
Sbjct: 232 ------------------LTKL----REIYLGQNQFNAFPAELCVLDQLRTIDLDKNRVA 269

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            +P E+   A+L  L ++ N +   P+A L     +S L + +N LR +P  G  ++  +
Sbjct: 270 AIPEEVGHLAALHKLYVAHNSLPCLPEA-LGRCGGMSVLDVSHNLLRGIPH-GMAELAEM 327

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
             + LS N +  +P      S  HL  LYL    LR       RL  LR LDLS+N L  
Sbjct: 328 TEVGLSGNRLDKVPHLLCHWSSLHL--LYLSDAGLRRLRGSFRRLVNLRFLDLSRNLLDH 385

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL------- 404
            P     L  L  L L DN I  LP EL  L   L+ L L GN   S    +        
Sbjct: 386 CPRQLCALRKLEVLSLDDNRIGQLPSELCSLS-KLKILGLTGNEFVSFPEEVFSLESLEK 444

Query: 405 -----DRGTKAVLKYLKDKIPEN 422
                D+G+K  L Y    +PEN
Sbjct: 445 LYIGQDQGSK--LTY----VPEN 461


>gi|425460335|ref|ZP_18839816.1| Leucine-rich-repeat protein (fragment) [Microcystis aeruginosa PCC
           9808]
 gi|389826964|emb|CCI22115.1| Leucine-rich-repeat protein (fragment) [Microcystis aeruginosa PCC
           9808]
          Length = 834

 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/232 (37%), Positives = 126/232 (54%), Gaps = 16/232 (6%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           ++EL+L G NL+ IP EI +   +  L+LS N I E+P  L+   SLQ L L  N+I++ 
Sbjct: 18  ARELNLSGRNLTEIPPEIAQLTSLQYLNLSNNQISEIPEALAHLTSLQHLNLYNNQIREI 77

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P+A    L+SL  L L +N + ++P +    +  LQ L L  N I+ +PE    + L  L
Sbjct: 78  PEA-FAHLTSLQFLDLGHNQISEIP-EALAYLTSLQGLYLRNNQISEIPE--ALTHLTSL 133

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           QELYL   Q+RE P  +  L  L+ LDL  N ++ IPE   +LTSL  L LS+N IS  P
Sbjct: 134 QELYLYNNQIREIPEALSHLTSLQSLDLRNNQIREIPEALAHLTSLQYLYLSNNQISETP 193

Query: 377 PELGLLEPSLQALRLDGNPLRSIRRTILDRGT----------KAVLKYLKDK 418
             L  L  +L+ L L  NP+ ++   I+ RG           +A+  YLK K
Sbjct: 194 EALAHL-VNLKRLVLQNNPITNVPPEIIRRGWGETISDDGNPQAIFNYLKYK 244



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 107/239 (44%), Gaps = 38/239 (15%)

Query: 47  RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 106
           R   L+L    +  IP  I+   SL    + NN +S +P  L  L+ L  L+L++NQ++E
Sbjct: 17  RARELNLSGRNLTEIPPEIAQLTSLQYLNLSNNQISEIPEALAHLTSLQHLNLYNNQIRE 76

Query: 107 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
                  L  L  LDL +N +S +P  +  +T+L+ L L  N +                
Sbjct: 77  IPEAFAHLTSLQFLDLGHNQISEIPEALAYLTSLQGLYLRNNQI---------------- 120

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
               S +PE             +T  T L    +EL L    +  IP  +     +  LD
Sbjct: 121 ----SEIPE------------ALTHLTSL----QELYLYNNQIREIPEALSHLTSLQSLD 160

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           L  N I+E+P  L+   SLQ L LS N+I + P+A L  L +L  L L NNP+  VP +
Sbjct: 161 LRNNQIREIPEALAHLTSLQYLYLSNNQISETPEA-LAHLVNLKRLVLQNNPITNVPPE 218



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 19/213 (8%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
            A  T L  L    N ++ +PE +  L+ L  L L  N+I  IP +++   SL E Y+ N
Sbjct: 81  FAHLTSLQFLDLGHNQISEIPEALAYLTSLQGLYLRNNQISEIPEALTHLTSLQELYLYN 140

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N +  +P  L  L+ L +LDL +NQ++E       L  L  L LSNN +S  P  +  + 
Sbjct: 141 NQIREIPEALSHLTSLQSLDLRNNQIREIPEALAHLTSLQYLYLSNNQISETPEALAHLV 200

Query: 138 TLRKLLLTGNPLRTLRSSLV----------NGPTPALLKYLR---SRLPENE-----DSE 179
            L++L+L  NP+  +   ++          +G   A+  YL+    + P NE       E
Sbjct: 201 NLKRLVLQNNPITNVPPEIIRRGWGETISDDGNPQAIFNYLKYKGEKRPLNELKVLLVGE 260

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
               K  L+      +  S E    G+N+   P
Sbjct: 261 GDVGKTSLLKRLLHNTFNSGEPKTPGINIEKWP 293



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 8/144 (5%)

Query: 14  LSNNLI-------ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 66
           LSNN I       A  T L  L    N +  +PE    L+ L  LDL  N+I  IP +++
Sbjct: 46  LSNNQISEIPEALAHLTSLQHLNLYNNQIREIPEAFAHLTSLQFLDLGHNQISEIPEALA 105

Query: 67  GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNS 125
              SL   Y+ NN +S +P  L  L+ L  L L++NQ++E       L  L  LDL NN 
Sbjct: 106 YLTSLQGLYLRNNQISEIPEALTHLTSLQELYLYNNQIREIPEALSHLTSLQSLDLRNNQ 165

Query: 126 LSGLPPEIGKMTTLRKLLLTGNPL 149
           +  +P  +  +T+L+ L L+ N +
Sbjct: 166 IREIPEALAHLTSLQYLYLSNNQI 189



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 14/202 (6%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           IA  T L  L  S N ++ +PE +  L+ L  L+L+ N+I  IP + +   SL    +G+
Sbjct: 35  IAQLTSLQYLNLSNNQISEIPEALAHLTSLQHLNLYNNQIREIPEAFAHLTSLQFLDLGH 94

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N +S +P  L  L+ L  L L +NQ+ E       L  L  L L NN +  +P  +  +T
Sbjct: 95  NQISEIPEALAYLTSLQGLYLRNNQISEIPEALTHLTSLQELYLYNNQIREIPEALSHLT 154

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +L+ L L  N +R +  +L +  +   L+YL   L  N+ SE       L+ +       
Sbjct: 155 SLQSLDLRNNQIREIPEALAHLTS---LQYL--YLSNNQISETPEALAHLVNL------- 202

Query: 198 SKELSLEGMNLSAIPSEIWEAG 219
            K L L+   ++ +P EI   G
Sbjct: 203 -KRLVLQNNPITNVPPEIIRRG 223


>gi|418741977|ref|ZP_13298350.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410750335|gb|EKR07315.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 379

 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 167/349 (47%), Gaps = 41/349 (11%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L+L  +++ ++   I    +L + Y+  N L+ LP E+G+L  L  LDL+SN+L     E
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L+ L VL+L  N L+ LP E+G++  L+ L L  N L  L         P  +  L+
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL---------PEKIGQLQ 163

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           +    N      TT    I    +L    +EL+L    L+ +  E+ +   +  LDL  N
Sbjct: 164 NLQILNSQGNQLTTFPKEIGQLQKL----QELNLGFNRLTTLREEVVQLQNLQILDLISN 219

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP E+   + LQ L L  N++   P+ I   L  L  L L NNPLR +P    K+I
Sbjct: 220 PLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEI-GQLKKLQELYLGNNPLRTLP----KEI 274

Query: 290 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
             LQ                      LQ LYL   Q+   P +I +LQ L+ L+L  N L
Sbjct: 275 EQLQ---------------------KLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQL 313

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
            ++P+    L +L EL+L  N ++ LP E+G L+  L+ L L  NP+ S
Sbjct: 314 TTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQ-KLRKLNLYNNPIAS 361



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 160/350 (45%), Gaps = 43/350 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G+KL  LS   I     L +L  + N L  +P  IG L  L  LDL+ N +  +P 
Sbjct: 53  LNLSGSKLATLSKE-IGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPK 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    +G N L+ LP E+G+L  L  L+L  N+L     +  QL+ L +L+  
Sbjct: 112 EIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQ 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+  P EIG++  L++L L  N L TLR  +V      +L                 
Sbjct: 172 GNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQIL----------------- 214

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
              DLI+                  L+ +P EI +  ++ KL L  N +  LP E+    
Sbjct: 215 ---DLISNP----------------LTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLK 255

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
            LQ L L  N ++  P  I   L  L  L L+ N +   P +    +  LQ L+L +N +
Sbjct: 256 KLQELYLGNNPLRTLPKEI-EQLQKLQTLYLEGNQITTFPKE-IGQLQNLQELNLGFNQL 313

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
            +LP+      L +LQEL L   QL   P ++ +LQ+LR L+L  N + S
Sbjct: 314 TTLPQ--EIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIAS 361



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 154/326 (47%), Gaps = 43/326 (13%)

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
            L+ L  E+GKL  L  L L+ NQL     E  QL+ L VLDL +N L+ LP EIGK+  
Sbjct: 59  KLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQN 118

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L+ L L  N L                    + LP            D +     L V  
Sbjct: 119 LQVLNLGFNRL--------------------TILP------------DEVGQLQNLQV-- 144

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
             L+L+   L+ +P +I +   +  L+   N +   P E+     LQ L L  N++    
Sbjct: 145 --LNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLR 202

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
           + ++  L +L  L L +NPL  +P +    +  LQ L L  N + +LPE      L  LQ
Sbjct: 203 EEVV-QLQNLQILDLISNPLTTLPKE-IGQLSKLQKLYLYGNQLTTLPE--EIGQLKKLQ 258

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           ELYL    LR  P +I +LQ+L+ L L  N + + P+    L +L EL+L  N ++ LP 
Sbjct: 259 ELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQ 318

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
           E+G L+ +LQ L L+ N L ++ + +
Sbjct: 319 EIGQLQ-NLQELNLEFNQLATLPKEV 343



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 90/154 (58%), Gaps = 4/154 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 59
           + +L++  N+LT L   ++    + + +LI+  N L  +P+ IG LS+L +L L+ N++ 
Sbjct: 188 LQELNLGFNRLTTLREEVVQLQNLQILDLIS--NPLTTLPKEIGQLSKLQKLYLYGNQLT 245

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 118
           ++P  I     L E Y+GNN L  LP E+ +L KL TL L  NQ+  +  E  QL+ L  
Sbjct: 246 TLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQE 305

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L+L  N L+ LP EIG++  L++L L  N L TL
Sbjct: 306 LNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATL 339



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 23/168 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL + GN+LT L    I     L EL    N L  +P+ I  L +L  L L  N+I +
Sbjct: 234 LQKLYLYGNQLTTLPEE-IGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITT 292

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
            P  I    +L E  +G N L+ LP E+G+L  L  L+L  NQ                 
Sbjct: 293 FPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQ----------------- 335

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
                L+ LP E+G++  LRKL L  NP+ + +   +    P  + Y 
Sbjct: 336 -----LATLPKEVGQLQKLRKLNLYNNPIASEKIERIRKLLPKCIIYF 378


>gi|351713627|gb|EHB16546.1| Leucine-rich repeat-containing protein 40 [Heterocephalus glaber]
          Length = 488

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 93/268 (34%), Positives = 143/268 (53%), Gaps = 51/268 (19%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L +    L+++PS I E   + KL++S N ++ LP E+++  +L+ L L  N++   P+ 
Sbjct: 32  LKIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEVTNLKNLKGLYLQHNELSCLPEG 91

Query: 261 ILTSLSSLSCLKLDNNPLRQVP---------------SDGFKDIPM-------LQILDLS 298
               LSSL  L L NN L  VP               S+  K++P        L+ LD +
Sbjct: 92  -FEQLSSLEDLDLSNNLLTAVPGSFSSLSSLMRLNLSSNQLKNLPAEISRMKKLKHLDCN 150

Query: 299 YNI-ASLPENPPFSSLPHLQELYLRRMQLREAP-----------------TDILRLQQLR 340
            N+  ++P  P F+ +  L+ LYLRR +LR  P                  ++L  + L+
Sbjct: 151 SNLLETIP--PEFAGMESLELLYLRRNKLRFLPEFLSCRLLKELHVGENQIEMLGAEHLK 208

Query: 341 ------ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
                 +LDL  N L+S+P+    L SL  LDLS+N+IS+LP  LG L   L+ L L+GN
Sbjct: 209 HLSSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGNL--PLKFLALEGN 266

Query: 395 PLRSIRRTILDRGTKAVLKYLKDKIPEN 422
           PLR+IRR I+++GT+ VLKYL+ KI ++
Sbjct: 267 PLRTIRREIINKGTQEVLKYLRSKIKDD 294



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 200/454 (44%), Gaps = 69/454 (15%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +P  I  L  L +L++  N++  +P  ++   +L   Y+ +N LS LP    +LS
Sbjct: 37  NQLTSLPSAIRELENLQKLNVSHNKLKILPEEVTNLKNLKGLYLQHNELSCLPEGFEQLS 96

Query: 93  KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
            L  LDL +N L         L  L  L+LS+N L  LP EI +M  L+ L    N L T
Sbjct: 97  SLEDLDLSNNLLTAVPGSFSSLSSLMRLNLSSNQLKNLPAEISRMKKLKHLDCNSNLLET 156

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE----------L 201
           +        +  LL   R++L    +  +    ++L     ++ +   E          L
Sbjct: 157 IPPEFAGMESLELLYLRRNKLRFLPEFLSCRLLKELHVGENQIEMLGAEHLKHLSSILVL 216

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP----------------------PELS 239
            L    L ++P EI     + +LDLS N I  LP                       E+ 
Sbjct: 217 DLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGNLPLKFLALEGNPLRTIRREII 276

Query: 240 SCASLQTLILSRNKIKD--------WPDAILTSLSSLS--------CLKLDNNPLRQ--- 280
           +  + + L   R+KIKD         PD    +L S S         LKL +   +Q   
Sbjct: 277 NKGTQEVLKYLRSKIKDDGPTHNDSAPDTTAMTLPSESRVNVHAIVALKLLDYSDKQTTL 336

Query: 281 VPSDGFKDIP--MLQILDLSYN-----------IASLPENPPFSSLPHLQELYLRRMQLR 327
           +P + F  +   ++  ++ S N           + SLPE+    SL  LQ + L   + +
Sbjct: 337 IPDEVFDAVKSNVVTSVNFSKNQLCEIPKRNNFLNSLPED--MKSLIRLQTINLSFNRFK 394

Query: 328 EAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
             P  +  +  L  + +S N + S+ P+  K + +L  LDL +N++  +PPELG    SL
Sbjct: 395 VLPEVLYHIPTLESILISNNQVGSLDPQKMKMMENLMTLDLQNNDLLQIPPELGNC-VSL 453

Query: 387 QALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           + L LDGNP R  R  IL +GT AVL+YL+D+IP
Sbjct: 454 RTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 487



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 166/390 (42%), Gaps = 93/390 (23%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL+V  NKL +L    + +   L  L    N L+ +PE    LS L  LDL  N + +
Sbjct: 52  LQKLNVSHNKLKILPEE-VTNLKNLKGLYLQHNELSCLPEGFEQLSSLEDLDLSNNLLTA 110

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN------------------ 102
           +P S S   SL    + +N L  LPAE+ ++ KL  LD +SN                  
Sbjct: 111 VPGSFSSLSSLMRLNLSSNQLKNLPAEISRMKKLKHLDCNSNLLETIPPEFAGMESLELL 170

Query: 103 -----------------QLKEYCVEACQLRL------------SVLDLSNNSLSGLPPEI 133
                             LKE  V   Q+ +             VLDL +N L  +P EI
Sbjct: 171 YLRRNKLRFLPEFLSCRLLKELHVGENQIEMLGAEHLKHLSSILVLDLRDNKLKSVPDEI 230

Query: 134 GKMTTLRK----------------------LLLTGNPLRTLRSSLVNGPTPALLKYLRSR 171
             + +L +                      L L GNPLRT+R  ++N  T  +LKYLRS+
Sbjct: 231 TLLQSLERLDLSNNDISSLPCSLGNLPLKFLALEGNPLRTIRREIINKGTQEVLKYLRSK 290

Query: 172 L----PENEDSEASTTKEDLITMATRLSVTS----KELSLEGMNLSAIPSEIWEAGE--- 220
           +    P + DS   TT   L +  +R++V +    K L       + IP E+++A +   
Sbjct: 291 IKDDGPTHNDSAPDTTAMTLPS-ESRVNVHAIVALKLLDYSDKQTTLIPDEVFDAVKSNV 349

Query: 221 ITKLDLSRNSIQE----------LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +T ++ S+N + E          LP ++ S   LQT+ LS N+ K  P+ +L  + +L  
Sbjct: 350 VTSVNFSKNQLCEIPKRNNFLNSLPEDMKSLIRLQTINLSFNRFKVLPE-VLYHIPTLES 408

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
           + + NN +  +     K +  L  LDL  N
Sbjct: 409 ILISNNQVGSLDPQKMKMMENLMTLDLQNN 438



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 76/153 (49%), Gaps = 21/153 (13%)

Query: 21  SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 80
           S   L E+    N LN +PE + SL RL  ++L  NR   +P  +    +L    + NN 
Sbjct: 356 SKNQLCEIPKRNNFLNSLPEDMKSLIRLQTINLSFNRFKVLPEVLYHIPTLESILISNN- 414

Query: 81  LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 140
                       ++G+LD    ++ E         L  LDL NN L  +PPE+G   +LR
Sbjct: 415 ------------QVGSLDPQKMKMME--------NLMTLDLQNNDLLQIPPELGNCVSLR 454

Query: 141 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 455 TLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 487



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 116/259 (44%), Gaps = 44/259 (16%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L +H N++ S+PS+I    +L +  + +N L  LP E+  L  L  L L  N+L   C+ 
Sbjct: 32  LKIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEVTNLKNLKGLYLQHNELS--CLP 89

Query: 111 ACQLRLSV---LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 167
               +LS    LDLSNN L+ +P     +++L +L L+ N L+ L         PA    
Sbjct: 90  EGFEQLSSLEDLDLSNNLLTAVPGSFSSLSSLMRLNLSSNQLKNL---------PA---- 136

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
                      E S  K+             K L      L  IP E      +  L L 
Sbjct: 137 -----------EISRMKK------------LKHLDCNSNLLETIPPEFAGMESLELLYLR 173

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
           RN ++ L PE  SC  L+ L +  N+I+      L  LSS+  L L +N L+ VP D   
Sbjct: 174 RNKLRFL-PEFLSCRLLKELHVGENQIEMLGAEHLKHLSSILVLDLRDNKLKSVP-DEIT 231

Query: 288 DIPMLQILDLSYN-IASLP 305
            +  L+ LDLS N I+SLP
Sbjct: 232 LLQSLERLDLSNNDISSLP 250


>gi|334348870|ref|XP_001378202.2| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387-like [Monodelphis domestica]
          Length = 1009

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 214/484 (44%), Gaps = 104/484 (21%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN L VL     A+   L  L  S N  +  P  +  LS+L++L + +N I S+P 
Sbjct: 307 LSLSGNYLQVLPQT-TANMKNLKILNLSSNQFSIFPNILCYLSKLVKLRISKNFISSLPK 365

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL------------------- 104
            I    +L E ++ +N L+ LP ++ +L KL  LDL  N+L                   
Sbjct: 366 EIKQLKNLEELFLDHNQLTFLPVQIFRLIKLRKLDLVHNKLDILSHNIENFKDLKALLLD 425

Query: 105 --------KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
                   KE  + +C  +L  L L++N L  +P  I ++  LR+L +  N +  L   +
Sbjct: 426 NNLLKNLGKE--IYSCA-QLEYLSLNDNFLEKIPNNIYRLKNLRELHINRNKMTVLSEDI 482

Query: 157 VNGPTPALLKYLR---------SRLPENEDSEASTTKEDL-----ITMATRLSVTS--KE 200
                 + LKY+R           +P    + +   K DL      +    L   S  + 
Sbjct: 483 ------SHLKYIRVLNFSGNIIKEVPVELKNCSQMRKVDLSFNKIYSFPVGLCALSFLEY 536

Query: 201 LSLEGMNLSAIPSEI-----------------WEAGEITKL------DLSRNSIQELPPE 237
           L+L G  LS IP ++                 + +  I KL      +LS+N I  +P  
Sbjct: 537 LNLNGNELSEIPVDLSYSKQLIHLELNQNDFAYFSHHICKLKNLNFLNLSKNKIHHIPSS 596

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           +S+  SLQ L+LS NK + +P  + T L +L  L +  N ++ +PS+   ++ ++Q LD+
Sbjct: 597 ISNMTSLQVLLLSDNKFEIFPQELCT-LGNLQILDISENQVQFIPSE-ISNLQVIQKLDI 654

Query: 298 SYN-IASLPE------------------------NPPFSSLPHLQELYLRRMQLREAPTD 332
           S N   S P                         +   ++L HL+ L +    ++E P +
Sbjct: 655 SSNRFESFPNELCQLSTLTELKLCQKNGWKLNQVSEELTNLIHLKILDISHNNIKEIPKN 714

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
           I  L++L   + S N +  +P  F +L  L +LD+S+N ++ LP  L  L PSL+ +  D
Sbjct: 715 IGELKRLATFNASNNLIHILPPSFGSLNKLQQLDMSENRLTTLPTNLSSL-PSLKEINFD 773

Query: 393 GNPL 396
           GNPL
Sbjct: 774 GNPL 777



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 177/406 (43%), Gaps = 44/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNL----------------------IASWTMLTELIASKNLLNGM 38
           + KLD+  NKL +LS+N+                      I S   L  L  + N L  +
Sbjct: 396 LRKLDLVHNKLDILSHNIENFKDLKALLLDNNLLKNLGKEIYSCAQLEYLSLNDNFLEKI 455

Query: 39  PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 98
           P  I  L  L  L +++N++  +   IS    +       N +  +P EL   S++  +D
Sbjct: 456 PNNIYRLKNLRELHINRNKMTVLSEDISHLKYIRVLNFSGNIIKEVPVELKNCSQMRKVD 515

Query: 99  LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
           L  N++  + V  C L  L  L+L+ N LS +P ++     L  L L  N        + 
Sbjct: 516 LSFNKIYSFPVGLCALSFLEYLNLNGNELSEIPVDLSYSKQLIHLELNQNDFAYFSHHIC 575

Query: 158 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 217
                  L   ++++     S         I+  T L V    L L        P E+  
Sbjct: 576 KLKNLNFLNLSKNKIHHIPSS---------ISNMTSLQV----LLLSDNKFEIFPQELCT 622

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL---D 274
            G +  LD+S N +Q +P E+S+   +Q L +S N+ + +P+  L  LS+L+ LKL   +
Sbjct: 623 LGNLQILDISENQVQFIPSEISNLQVIQKLDISSNRFESFPNE-LCQLSTLTELKLCQKN 681

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
              L QV S+   ++  L+ILD+S+N I  +P+N     L  L         +   P   
Sbjct: 682 GWKLNQV-SEELTNLIHLKILDISHNNIKEIPKN--IGELKRLATFNASNNLIHILPPSF 738

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
             L +L+ LD+S+N L ++P    +L SL E++   N +   PPE+
Sbjct: 739 GSLNKLQQLDMSENRLTTLPTNLSSLPSLKEINFDGNPLIRPPPEV 784



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 170/414 (41%), Gaps = 71/414 (17%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L+ L  S N L  +P  +  L +L +L L  N     P+ +     L    +  N L  L
Sbjct: 258 LSVLSVSHNQLASLPAQLSQLVKLRQLFLDYNNFWEFPAILERLTMLELLSLSGNYLQVL 317

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P     +  L  L+L SNQ   +    C L +L  L +S N +S LP EI ++  L +L 
Sbjct: 318 PQTTANMKNLKILNLSSNQFSIFPNILCYLSKLVKLRISKNFISSLPKEIKQLKNLEELF 377

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL------ITMATRLSVT 197
           L  N L  L   +       L+K  +  L  N+    S   E+       +     L   
Sbjct: 378 LDHNQLTFLPVQIF-----RLIKLRKLDLVHNKLDILSHNIENFKDLKALLLDNNLLKNL 432

Query: 198 SKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNS------------------ 230
            KE         LSL    L  IP+ I+    + +L ++RN                   
Sbjct: 433 GKEIYSCAQLEYLSLNDNFLEKIPNNIYRLKNLRELHINRNKMTVLSEDISHLKYIRVLN 492

Query: 231 -----IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
                I+E+P EL +C+ ++ + LS NKI  +P   L +LS L  L L+ N L ++P   
Sbjct: 493 FSGNIIKEVPVELKNCSQMRKVDLSFNKIYSFPVG-LCALSFLEYLNLNGNELSEIP--- 548

Query: 286 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
                    +DLSY+            L HL+   L +         I +L+ L  L+LS
Sbjct: 549 ---------VDLSYS----------KQLIHLE---LNQNDFAYFSHHICKLKNLNFLNLS 586

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           +N +  IP    N+TSL  L LSDN     P EL  L  +LQ L +  N ++ I
Sbjct: 587 KNKIHHIPSSISNMTSLQVLLLSDNKFEIFPQELCTL-GNLQILDISENQVQFI 639


>gi|345310727|ref|XP_001521360.2| PREDICTED: leucine-rich repeat and death domain-containing protein
           1-like, partial [Ornithorhynchus anatinus]
          Length = 746

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 194/418 (46%), Gaps = 54/418 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L+++ N++  L    +     L +L    NLL   P  +G L  L  LDL  N + S+P 
Sbjct: 246 LNIDHNQIASLPKE-VGRLVGLRQLFCGHNLLEEFPAVLGGLENLDILDLAGNNLKSVPE 304

Query: 64  SIS--------------------GCCSLAEFY---MGNNALSALPAELGKLSKLGTLDLH 100
           SI+                      C L +     +  NA+S+LP ++ +L  L  L ++
Sbjct: 305 SITRLQRLQVLHLDSNQLEIFPKALCYLPKLTGLSLSGNAISSLPKDIKELRNLEELAMN 364

Query: 101 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 159
            NQL     +  QL +L  + L +N L  L P IG +  LR LLL  N  +T+   +   
Sbjct: 365 HNQLTFLPGQFFQLLKLREVHLGSNKLESLSPSIGNLQELRVLLLWDNLFKTITEKIG-- 422

Query: 160 PTPALLKYLRSR------LPEN-----EDSEASTTK------EDLITMATRLSVTSKELS 202
            T +LL+ L  R      LP N     +  E    +      E+ I+    LSV    L 
Sbjct: 423 -TCSLLEKLDLRGNGLTQLPPNFRRLQKLKELYVGRNQLGRLEEHISRLKDLSV----LE 477

Query: 203 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 262
           + G  ++ +P EI   G++T++DLS N + + P  L++ A+L  L L+ N+I + P+ I 
Sbjct: 478 ISGNGIAHVPVEIKNCGQLTRVDLSANELGQFPLGLTALAALNYLNLNGNEISEIPEEI- 536

Query: 263 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 321
           + +  L  L+L  N L    S+    +  L  LDL  N I+ +P  P  S++  L++L L
Sbjct: 537 SEMERLIHLELRQNRLTSF-SNYLCRLRKLSYLDLGKNGISGIP--PAVSNMLSLRDLIL 593

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
              +    P ++  L+ L  LDLS+N +Q IP    NL  +  LD S+N   + P EL
Sbjct: 594 DYNRFSAFPKELCSLKGLETLDLSENQIQCIPLKICNLQRIRRLDFSNNQFGSFPVEL 651



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 164/385 (42%), Gaps = 66/385 (17%)

Query: 21  SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 80
           S + L EL   +  L  +P  IG L+ L  L++  N+I S+P  +     L + + G+N 
Sbjct: 216 SLSGLEELCLERIDLTCLPPEIGQLANLRVLNIDHNQIASLPKEVGRLVGLRQLFCGHNL 275

Query: 81  LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL 139
           L   PA LG L  L  LDL  N LK       +L RL VL L +N L   P  +  +  L
Sbjct: 276 LEEFPAVLGGLENLDILDLAGNNLKSVPESITRLQRLQVLHLDSNQLEIFPKALCYLPKL 335

Query: 140 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 199
             L L+GN + +L         P  +K LR+                            +
Sbjct: 336 TGLSLSGNAISSL---------PKDIKELRNL---------------------------E 359

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           EL++    L+ +P + ++  ++ ++ L  N ++ L P + +   L+ L+L  N  K   +
Sbjct: 360 ELAMNHNQLTFLPGQFFQLLKLREVHLGSNKLESLSPSIGNLQELRVLLLWDNLFKTITE 419

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 319
            I T  S L  L L  N L Q+P                         P F  L  L+EL
Sbjct: 420 KIGTC-SLLEKLDLRGNGLTQLP-------------------------PNFRRLQKLKEL 453

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
           Y+ R QL      I RL+ L +L++S N +  +P   KN   LT +DLS N +   P  L
Sbjct: 454 YVGRNQLGRLEEHISRLKDLSVLEISGNGIAHVPVEIKNCGQLTRVDLSANELGQFP--L 511

Query: 380 GLLE-PSLQALRLDGNPLRSIRRTI 403
           GL    +L  L L+GN +  I   I
Sbjct: 512 GLTALAALNYLNLNGNEISEIPEEI 536



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 176/396 (44%), Gaps = 20/396 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+LT L          L E+    N L  +  +IG+L  L  L L  N   +
Sbjct: 358 LEELAMNHNQLTFLPGQFF-QLLKLREVHLGSNKLESLSPSIGNLQELRVLLLWDNLFKT 416

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           I   I  C  L +  +  N L+ LP    +L KL  L +  NQL        +L+ LSVL
Sbjct: 417 ITEKIGTCSLLEKLDLRGNGLTQLPPNFRRLQKLKELYVGRNQLGRLEEHISRLKDLSVL 476

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           ++S N ++ +P EI     L ++ L+ N L      L      A L YL   L  NE SE
Sbjct: 477 EISGNGIAHVPVEIKNCGQLTRVDLSANELGQFPLGLT---ALAALNYLN--LNGNEISE 531

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E++  M   +      L L    L++  + +    +++ LDL +N I  +PP +S
Sbjct: 532 ---IPEEISEMERLI-----HLELRQNRLTSFSNYLCRLRKLSYLDLGKNGISGIPPAVS 583

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  SL+ LIL  N+   +P   L SL  L  L L  N ++ +P     ++  ++ LD S 
Sbjct: 584 NMLSLRDLILDYNRFSAFPKE-LCSLKGLETLDLSENQIQCIPLK-ICNLQRIRRLDFSN 641

Query: 300 N-IASLP-ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
           N   S P E    ++L  L     R  +    P  +  L  L+ LD+S N+++ +P    
Sbjct: 642 NQFGSFPVELCALTTLEELLLSQNRGRKFTHLPEQLTALTGLKELDISDNAIKELPRNIG 701

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
            L SL  L   +N +  LPP   LL   LQ L + G
Sbjct: 702 ELRSLVRLLARNNAVGCLPPSFRLLH-GLQQLDMSG 736



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 6/184 (3%)

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           +++  G    L   RNSI+  PP L S + L+ L L R  +   P  I   L++L  L +
Sbjct: 190 QVFPEGISESLYAKRNSIRGFPPNLDSLSGLEELCLERIDLTCLPPEI-GQLANLRVLNI 248

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLPHLQELYLRRMQLREAPTD 332
           D+N +  +P +  + + + Q+    +N+  L E P     L +L  L L    L+  P  
Sbjct: 249 DHNQIASLPKEVGRLVGLRQLF-CGHNL--LEEFPAVLGGLENLDILDLAGNNLKSVPES 305

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
           I RLQ+L++L L  N L+  P+    L  LT L LS N IS+LP ++  L  +L+ L ++
Sbjct: 306 ITRLQRLQVLHLDSNQLEIFPKALCYLPKLTGLSLSGNAISSLPKDIKELR-NLEELAMN 364

Query: 393 GNPL 396
            N L
Sbjct: 365 HNQL 368



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
           P   SL  L+EL L R+ L   P +I +L  LR+L++  N + S+P+    L  L +L  
Sbjct: 212 PNLDSLSGLEELCLERIDLTCLPPEIGQLANLRVLNIDHNQIASLPKEVGRLVGLRQLFC 271

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             N +   P  LG LE +L  L L GN L+S+  +I
Sbjct: 272 GHNLLEEFPAVLGGLE-NLDILDLAGNNLKSVPESI 306


>gi|417760264|ref|ZP_12408290.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774468|ref|ZP_12422333.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418675383|ref|ZP_13236674.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943831|gb|EKN89422.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410575801|gb|EKQ38818.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410577545|gb|EKQ45415.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 384

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 165/344 (47%), Gaps = 44/344 (12%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S++ L  +P+ IG L  L  L+   N++ ++P  I    +L E ++ NN L+ LP E+G+
Sbjct: 59  SRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQ 118

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  L L++NQL     E  +L+ L  L+L  N L+ LP EIG++  L++L L+ N L
Sbjct: 119 LQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRL 178

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN-- 207
                               + LPE      S  K                LSL G N  
Sbjct: 179 --------------------TILPEEIGQLESLRK----------------LSLGGKNKP 202

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
            + +P EI +   + +L L  N +  LP E+    +L+ L L +N++   P  I   L +
Sbjct: 203 FTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEI-GQLKN 261

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L L  N L  +P +    +  LQ L+L YN   + P+    +   +LQ+L+L R QL
Sbjct: 262 LLVLDLSGNQLTILPKE-ITQLQNLQELNLEYNRFEAFPKE--ITQFQNLQKLHLSRNQL 318

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
              P +I RLQ+L  L L  N L ++PE  K L +L +L L +N
Sbjct: 319 TTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNN 362



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 158/333 (47%), Gaps = 42/333 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  +KL +L    I     L  L +  N L  +P+ IG L  L  L L  N++ ++P 
Sbjct: 56  LDLSRSKLKILPKE-IGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPE 114

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L   ++ NN L+ LP E+GKL  L  L+L  N+L     E  +L+ L  L LS
Sbjct: 115 EIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLS 174

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++ +LRKL L G           N P   L K         E ++   
Sbjct: 175 LNRLTILPEEIGQLESLRKLSLGGK----------NKPFTILPK---------EITQLQN 215

Query: 183 TKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
            +E L     RL+V  KE         L L    L+ +P EI +   +  LDLS N +  
Sbjct: 216 LQE-LHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTI 274

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E++   +LQ L L  N+ + +P  I T   +L  L L  N L  +P    K+I  LQ
Sbjct: 275 LPKEITQLQNLQELNLEYNRFEAFPKEI-TQFQNLQKLHLSRNQLTTLP----KEIGRLQ 329

Query: 294 ILD---LSYN-IASLPENPPFSSLPHLQELYLR 322
            L+   L +N +A+LPE      L +L++LYL 
Sbjct: 330 KLESLGLDHNQLATLPEE--IKQLKNLKKLYLH 360



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 154/345 (44%), Gaps = 72/345 (20%)

Query: 68  CCSLAEFYMGNNA------LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 120
            CSL +F+   N        + L   L   +++  LDL  ++LK    E  QL+ L +L+
Sbjct: 21  VCSLTQFHAEENYTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILN 80

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
             NN L+ LP EIGK+  L++L L  N L T                    LPE      
Sbjct: 81  SENNQLTTLPKEIGKLQNLQELHLQNNQLTT--------------------LPEE----- 115

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                  I     L V    L L    L+ +P EI +   + +L+L  N +  LP E+  
Sbjct: 116 -------IGQLQNLKV----LHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGR 164

Query: 241 CASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
             +LQ L LS N++   P+ I  L SL  LS L   N P   +P    K+I  LQ     
Sbjct: 165 LQNLQELYLSLNRLTILPEEIGQLESLRKLS-LGGKNKPFTILP----KEITQLQ----- 214

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
                           +LQEL+L+  +L   P +I +LQ LRILDL QN L  +P+    
Sbjct: 215 ----------------NLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 258

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L +L  LDLS N ++ LP E+  L+ +LQ L L+ N   +  + I
Sbjct: 259 LKNLLVLDLSGNQLTILPKEITQLQ-NLQELNLEYNRFEAFPKEI 302



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 2/169 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L ++ N+LTVL    I     L  L   +N L  +P+ IG L  L+ LDL  N++  
Sbjct: 216 LQELHLKFNRLTVLPKE-IGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTI 274

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I+   +L E  +  N   A P E+ +   L  L L  NQL     E  +L +L  L
Sbjct: 275 LPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQKLHLSRNQLTTLPKEIGRLQKLESL 334

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
            L +N L+ LP EI ++  L+KL L  NPL + +   +    P  + Y 
Sbjct: 335 GLDHNQLATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRKLLPQCIIYF 383


>gi|24215148|ref|NP_712629.1| hypothetical protein LA_2448 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074467|ref|YP_005988784.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|417776841|ref|ZP_12424673.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672944|ref|ZP_13234274.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|24196218|gb|AAN49647.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458256|gb|AER02801.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|410573337|gb|EKQ36387.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580051|gb|EKQ47882.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 428

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 175/367 (47%), Gaps = 41/367 (11%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ I  L  L +L L  NR+ ++P  I    +L E  + +N L+ LP E+GKL  L  L
Sbjct: 63  LPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRL 122

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL+ N+L    +E  +L+ L  L LS+N L+ LP E GK+  L++L L+ N L TL    
Sbjct: 123 DLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTL---- 178

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                P  +  L++    N  S   TT    I     L      L+L    L+ +P EI 
Sbjct: 179 -----PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQT----LNLSDNQLTTLPIEIG 229

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           +   +  L+LS N +  LP E+    +L TL LS N++   P  I   L +L  L L  N
Sbjct: 230 KLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEI-GKLQNLHTLNLSGN 288

Query: 277 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
                           Q+  LS  I           L +LQ+L L   QL     +I +L
Sbjct: 289 ----------------QLTTLSIEIG---------KLQNLQDLNLHSNQLTTLSKEIEQL 323

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           + L+ L LS N L  +P+    L +L EL+L +N ++ALP E+G L+ +LQ L L  N L
Sbjct: 324 KNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQ-NLQTLSLYKNRL 382

Query: 397 RSIRRTI 403
            +  + I
Sbjct: 383 MTFPKEI 389



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 120/373 (32%), Positives = 171/373 (45%), Gaps = 43/373 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+L  L    I     L EL  S N L  +P+ IG L  L RLDL+ NR+  
Sbjct: 73  LQKLYLFDNRLKTLPKE-IGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L   Y+ +N L+ LP E GKL  L  L+L  NQL     E  QL+ L  L
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTL 191

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L +N L+ L  EI ++  L+ L L+ N L TL         P  +  L++         
Sbjct: 192 NLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTL---------PIEIGKLQNL-------- 234

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                L+L    L+ +P EI +   +  L+LS N +  LP E+ 
Sbjct: 235 -------------------HTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIG 275

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L TL LS N++      I   L +L  L L +N L  + S   + +  LQ L LSY
Sbjct: 276 KLQNLHTLNLSGNQLTTLSIEI-GKLQNLQDLNLHSNQLTTL-SKEIEQLKNLQTLSLSY 333

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +  LP+      L +LQEL L   QL   P +I +LQ L+ L L +N L + P+    
Sbjct: 334 NRLVILPK--EIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQ 391

Query: 359 LTSLTELDLSDNN 371
           L +L  L L  +N
Sbjct: 392 LKNLQTLYLGGHN 404



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 137/287 (47%), Gaps = 42/287 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS  + + LP EI ++  L+KL L  N L+TL         P  +  L++   
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTL---------PKEIGQLKNL-- 96

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                    +EL+L    L+ +P EI +   + +LDL  N +  
Sbjct: 97  -------------------------QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQTL LS N++   P      L +L  L L +N L  +P +    +  LQ
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRES-GKLENLQELNLSDNQLTTLPQE-IGQLQNLQ 189

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L+L  N + +L +      L +LQ L L   QL   P +I +LQ L  L+LS N L ++
Sbjct: 190 TLNLKSNQLTTLFK--EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTL 247

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           P     L +L  L+LSDN ++ LP E+G L+ +L  L L GN L ++
Sbjct: 248 PIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQ-NLHTLNLSGNQLTTL 293



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 113/213 (53%), Gaps = 6/213 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L G N + +P EI +   + KL L  N ++ LP E+    +LQ L
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            LS N++   P  I   L +L  L L +N L  +P +  K +  LQ L LS N + +LP 
Sbjct: 100 NLSSNQLTILPKEI-GKLENLQRLDLYDNRLTILPIEIGK-LQNLQTLYLSSNQLTTLPR 157

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +LQEL L   QL   P +I +LQ L+ L+L  N L ++ +  + L +L  L+
Sbjct: 158 ES--GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLN 215

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LSDN ++ LP E+G L+ +L  L L  N L ++
Sbjct: 216 LSDNQLTTLPIEIGKLQ-NLHTLNLSDNQLTTL 247



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 85/180 (47%), Gaps = 27/180 (15%)

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           LDLS  +   LP E+    +LQ L L  N++K  P  I   L +L  L L +N L  +P 
Sbjct: 53  LDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEI-GQLKNLQELNLSSNQLTILPK 111

Query: 284 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
           +                            L +LQ L L   +L   P +I +LQ L+ L 
Sbjct: 112 E-------------------------IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLY 146

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           LS N L ++P     L +L EL+LSDN ++ LP E+G L+ +LQ L L  N L ++ + I
Sbjct: 147 LSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQ-NLQTLNLKSNQLTTLFKEI 205



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 4/111 (3%)

Query: 292 LQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
           +++LDLS  N  +LP+      L +LQ+LYL   +L+  P +I +L+ L+ L+LS N L 
Sbjct: 50  VRVLDLSGQNFTTLPK--EIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLT 107

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
            +P+    L +L  LDL DN ++ LP E+G L+ +LQ L L  N L ++ R
Sbjct: 108 ILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQ-NLQTLYLSSNQLTTLPR 157


>gi|260826692|ref|XP_002608299.1| hypothetical protein BRAFLDRAFT_89276 [Branchiostoma floridae]
 gi|229293650|gb|EEN64309.1| hypothetical protein BRAFLDRAFT_89276 [Branchiostoma floridae]
          Length = 2303

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 197/402 (49%), Gaps = 23/402 (5%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
            +  L++  N L  L  NL+   + L  L AS N L  +PE  G LSRL  LDL +N I S
Sbjct: 631  LETLNIGSNGLYSLPGNLV-ELSQLKHLRASHNRLTSLPEQFGKLSRLKVLDLTKNNIES 689

Query: 61   IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
            +P S S   +L+   + +N +S+ P E+  ++ L  +DL SN++         L  +  L
Sbjct: 690  LPDSFSSLNALSVLRLASNDMSSFPTEVCGINTLTDIDLSSNKIPSLPFGVGLLENVEAL 749

Query: 120  DLSNNSL-SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
            +LS N L   +   I +MT+L+ L L+   +  +  ++             SRL E E  
Sbjct: 750  NLSKNKLPDDMHDFISQMTSLKHLDLSQTGMTKVPETI-------------SRLEELEYL 796

Query: 179  EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
              S+ K   I          +EL      L  +P +  +  ++ +L L  N + EL   +
Sbjct: 797  NISSNKLQYIPSEMFELPFLEELDASDNVLKELPVDAVQESDVERLLLGGNHLDELSRNI 856

Query: 239  SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
            ++   L+ L LSRN ++D P++ L+ L  L  L L  N LR  P + F  + ML++LDLS
Sbjct: 857  NTLMYLERLDLSRNNLRDLPES-LSFLPCLEILNLSGNRLRHFPPE-FSGL-MLEVLDLS 913

Query: 299  YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
             N +  +P     + +  LQ L + R +++     + +L  L  LD+S+NS+ SIPE   
Sbjct: 914  DNGLRFVPRE--VTDMLSLQTLNISRNRIKVIGDRMCQLDSLVDLDISRNSVTSIPENIC 971

Query: 358  NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
             L ++  L  S NNIS++  ++  L P+L+ L L  N L  +
Sbjct: 972  LLANMERLTASHNNISSIIRDVCEL-PNLEYLDLRHNQLEKV 1012



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 184/412 (44%), Gaps = 42/412 (10%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +P  +    +L+ L    NRI  +P  I+G   +    + NN +  +  ++ +L 
Sbjct: 341 NKLTAIPTCVYQAQKLVCLSAEGNRIRVLPEEIAGLKDIRVLKLKNNRIRQVADDVAELC 400

Query: 93  KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
           ++  LDL  N+L        ++R +  LDLS N +  +P EI  +  L+ L L G  LR 
Sbjct: 401 EIRHLDLSENRLNGIHPSILEMRHMESLDLSKNRVIKIPREISHLRRLQTLKLRGTDLRE 460

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLS 209
           +   L        +  LR         E    +   + ++ ++S     K LSL+G  LS
Sbjct: 461 VNEELFT------IDDLR---------ELDIGQNPRMFISEKVSKLRCLKTLSLDGCRLS 505

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P E++E   +  LD+S N I+ +P  + +   L+ L  +R  +   P +IL  L  L 
Sbjct: 506 GLPRELFELPNLEVLDISDNDIRTIPTAIENLKKLKVLRANRLFLDSVPYSIL-GLCKLR 564

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN--------------------P 308
           CL L  N ++++ S+    +  LQ+LDLS N I  +P                       
Sbjct: 565 CLFLQGNRIQKI-SESISMLKELQVLDLSDNKIRRIPAQLGEISTLQSVNVERNWVTDLT 623

Query: 309 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 368
           P   L +L+ L +    L   P +++ L QL+ L  S N L S+PE F  L+ L  LDL+
Sbjct: 624 PICRLKYLETLNIGSNGLYSLPGNLVELSQLKHLRASHNRLTSLPEQFGKLSRLKVLDLT 683

Query: 369 DNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
            NNI +LP     L  +L  LRL  N + S    +    T   +    +KIP
Sbjct: 684 KNNIESLPDSFSSLN-ALSVLRLASNDMSSFPTEVCGINTLTDIDLSSNKIP 734



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 187/418 (44%), Gaps = 62/418 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV GN+++      I++   L EL  S+  L  +PE + +L  L  LD+          
Sbjct: 153 LDVSGNRISSFP---ISTLGTLKELYISRVQLQTIPEEVFALEELEVLDI---------- 199

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
                         NN +  LP +LGKL +L  L L  N +  + V      L  LDLS+
Sbjct: 200 -------------SNNKVKYLPVKLGKLYRLRVLKLGGNNVCSFEVMPALQCLEELDLSD 246

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL---------------VNGPTPAL--LK 166
             L  +P E   +T L+ L L  N +RT+ + +               ++  +  L  +K
Sbjct: 247 MRLKSIPKEAFYLTNLKTLKLNNNKIRTIPADIERPMALQTLLLDNNKISSVSEVLDKMK 306

Query: 167 YLRSRLPENE---DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 223
           +LR     N    DS       D+I++        + L+L+G  L+AIP+ +++A ++  
Sbjct: 307 FLRHLSLSNNNLTDSGFPVDDVDIISL--------EHLNLDGNKLTAIPTCVYQAQKLVC 358

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV-P 282
           L    N I+ LP E++    ++ L L  N+I+   D +   L  +  L L  N L  + P
Sbjct: 359 LSAEGNRIRVLPEEIAGLKDIRVLKLKNNRIRQVADDV-AELCEIRHLDLSENRLNGIHP 417

Query: 283 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           S    ++  ++ LDLS N +  +P     S L  LQ L LR   LRE   ++  +  LR 
Sbjct: 418 S--ILEMRHMESLDLSKNRVIKIPRE--ISHLRRLQTLKLRGTDLREVNEELFTIDDLRE 473

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LD+ QN    I E    L  L  L L    +S LP EL  L P+L+ L +  N +R+I
Sbjct: 474 LDIGQNPRMFISEKVSKLRCLKTLSLDGCRLSGLPRELFEL-PNLEVLDISDNDIRTI 530



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 168/409 (41%), Gaps = 86/409 (21%)

Query: 42  IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 101
           +  L  L+ LDL    + SIP  +    SL    + NN ++ +P  + KL  L  LD+  
Sbjct: 98  LSKLRTLVELDLSNQNLRSIPEEVFNIHSLEILRVANNGITEIPKSILKLKGLRILDVSG 157

Query: 102 NQ-----------LKEYCVEACQLR-----------LSVLDLSNNSLSGLPPEIGKMTTL 139
           N+           LKE  +   QL+           L VLD+SNN +  LP ++GK+  L
Sbjct: 158 NRISSFPISTLGTLKELYISRVQLQTIPEEVFALEELEVLDISNNKVKYLPVKLGKLYRL 217

Query: 140 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 199
           R L L GN + +          PAL                                  +
Sbjct: 218 RVLKLGGNNVCSFEV------MPAL-------------------------------QCLE 240

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           EL L  M L +IP E +    +  L L+ N I+ +P ++    +LQTL+L  NKI    +
Sbjct: 241 ELDLSDMRLKSIPKEAFYLTNLKTLKLNNNKIRTIPADIERPMALQTLLLDNNKISSVSE 300

Query: 260 AI-----LTSLS-------------------SLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            +     L  LS                   SL  L LD N L  +P+  ++   ++ + 
Sbjct: 301 VLDKMKFLRHLSLSNNNLTDSGFPVDDVDIISLEHLNLDGNKLTAIPTCVYQAQKLVCLS 360

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
                I  LPE    + L  ++ L L+  ++R+   D+  L ++R LDLS+N L  I   
Sbjct: 361 AEGNRIRVLPEE--IAGLKDIRVLKLKNNRIRQVADDVAELCEIRHLDLSENRLNGIHPS 418

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
              +  +  LDLS N +  +P E+  L   LQ L+L G  LR +   + 
Sbjct: 419 ILEMRHMESLDLSKNRVIKIPREISHLR-RLQTLKLRGTDLREVNEELF 466



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 191/416 (45%), Gaps = 21/416 (5%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
            +  L++  NKL  + + +      L EL AS N+L  +P      S + RL L  N +  
Sbjct: 793  LEYLNISSNKLQYIPSEMF-ELPFLEELDASDNVLKELPVDAVQESDVERLLLGGNHLDE 851

Query: 61   IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
            +  +I+    L    +  N L  LP  L  L  L  L+L  N+L+ +  E   L L VLD
Sbjct: 852  LSRNINTLMYLERLDLSRNNLRDLPESLSFLPCLEILNLSGNRLRHFPPEFSGLMLEVLD 911

Query: 121  LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
            LS+N L  +P E+  M +L+ L ++ N ++ +   +    +   L   R        +  
Sbjct: 912  LSDNGLRFVPREVTDMLSLQTLNISRNRIKVIGDRMCQLDSLVDLDISR--------NSV 963

Query: 181  STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
            ++  E++  +A    +T+        N+S+I  ++ E   +  LDL  N ++++P ++ S
Sbjct: 964  TSIPENICLLANMERLTASH-----NNISSIIRDVCELPNLEYLDLRHNQLEKVPTDIGS 1018

Query: 241  CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             + L+ L+LS NKI       L     L  L L  N L  +PS   +    L++L L+ N
Sbjct: 1019 LSQLRVLLLSGNKIAYVTTIDLAKAVELVLLDLSRNLLTSIPSSVCQSAS-LRVLKLNEN 1077

Query: 301  -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
             I  +P     S    L EL LR  ++     ++  L  LR +DLS N L ++P    ++
Sbjct: 1078 KIEGVPTY--ISRATGLTELQLRGNRIFVVCREVSELHNLRKVDLSYNHLSTLPLSICHM 1135

Query: 360  TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI--LDRGTKAVLK 413
            ++L  LD+S N I  L  ++  ++  ++  R  GN +  +   I  LDR    VL 
Sbjct: 1136 SNLEALDISHNRIYYLSSDVQKMK-KIRTFRAVGNKIHQLPEQILKLDRLEHVVLH 1190



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 196/433 (45%), Gaps = 52/433 (12%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
            +++L + GN++ V+    ++    L ++  S N L+ +P +I  +S L  LD+  NRI  
Sbjct: 1092 LTELQLRGNRIFVVCRE-VSELHNLRKVDLSYNHLSTLPLSICHMSNLEALDISHNRIYY 1150

Query: 61   IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
            + S +     +  F    N +  LP ++ KL +L  + LH N +      A    +  LD
Sbjct: 1151 LSSDVQKMKKIRTFRAVGNKIHQLPEQILKLDRLEHVVLHDNNIN-LLPSAMPPNVVTLD 1209

Query: 121  LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL---------------L 165
            LS N +S L   +G+M  L  L L  N + + R        P+L               +
Sbjct: 1210 LSCNGISRLGSSLGQMQNLEVLNLADNRVDSCRGVFGPNTFPSLRVLNVRNNAIMALPNI 1269

Query: 166  KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
             +LRS    +  + + +   DL   A+ L V   + +L    ++ +P EI +   I  L 
Sbjct: 1270 GHLRSLTSLDATANSISDLVDLCN-ASDLRVLKADNNL----ITEVPDEIAKLEHIELLS 1324

Query: 226  LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
            LS N + +L P LS  + ++ L+ +   + + P  +   L +L  ++L +N L   P   
Sbjct: 1325 LSGNWLDDLSPHLSELSKIRRLVFNSCMLTEVPPEV-GELRTLRSIELKDNELADFP--- 1380

Query: 286  FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
              D+ +                     LPHL  + L   +L   P ++ R + L+I+ LS
Sbjct: 1381 --DVLLY--------------------LPHLANVALDGNKLDIIPDEVRRFESLKIMSLS 1418

Query: 346  QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE-PSLQALRLDGNPLRSIRRTIL 404
            +N+++++P    ++ +L  LD+  N ++ LP ++  LE P++      GN L S  + + 
Sbjct: 1419 RNNIETLPSTLCHVNNLQWLDVRKNKLTTLPADIVRLEDPTILT---SGNCLVSPPQEVC 1475

Query: 405  DRGTKAVLKYLKD 417
            D+G  A+  + ++
Sbjct: 1476 DQGFSAITSFFEE 1488



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 148/339 (43%), Gaps = 50/339 (14%)

Query: 67  GCCSLAEFY---MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
           G C + +     + +N L+++P ++  L  L  L+L  N++ EY   +    L  LDLSN
Sbjct: 52  GVCKMEDIQSLDLRSNYLTSIPDDIENLRNLKVLNLSGNRIVEYSFLSKLRTLVELDLSN 111

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
            +L  +P E+  + +L  L +  N +  +  S++      +L    +R+     S   T 
Sbjct: 112 QNLRSIPEEVFNIHSLEILRVANNGITEIPKSILKLKGLRILDVSGNRISSFPISTLGTL 171

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
                          KEL +  + L  IP E++   E+  LD+S N ++ LP +L     
Sbjct: 172 ---------------KELYISRVQLQTIPEEVFALEELEVLDISNNKVKYLPVKLGKLYR 216

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 303
           L+ L L  N +  +   ++ +L  L  L L +  L+ +P + F                 
Sbjct: 217 LRVLKLGGNNVCSF--EVMPALQCLEELDLSDMRLKSIPKEAF----------------- 257

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
                    L +L+ L L   ++R  P DI R   L+ L L  N + S+ E    +  L 
Sbjct: 258 --------YLTNLKTLKLNNNKIRTIPADIERPMALQTLLLDNNKISSVSEVLDKMKFLR 309

Query: 364 ELDLSDNNI--SALP-PELGLLEPSLQALRLDGNPLRSI 399
            L LS+NN+  S  P  ++ ++  SL+ L LDGN L +I
Sbjct: 310 HLSLSNNNLTDSGFPVDDVDII--SLEHLNLDGNKLTAI 346



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 69/291 (23%)

Query: 155 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK-ELSLEGMNLSAIPS 213
           ++VNG T            ++ D+E  + +E+    + + S+ S     L    LS +  
Sbjct: 8   TMVNGDT------------DDSDAEVQSLEEE----SGKPSIPSHLHFDLSDRCLSHLSV 51

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
            + +  +I  LDL  N +  +P ++ +  +L+ L LS N+I ++  + L+ L +L  L L
Sbjct: 52  GVCKMEDIQSLDLRSNYLTSIPDDIENLRNLKVLNLSGNRIVEY--SFLSKLRTLVELDL 109

Query: 274 DNNPLRQVP---------------SDGFKDIPM-------LQILDLSYN-IASLPENPPF 310
            N  LR +P               ++G  +IP        L+ILD+S N I+S     P 
Sbjct: 110 SNQNLRSIPEEVFNIHSLEILRVANNGITEIPKSILKLKGLRILDVSGNRISSF----PI 165

Query: 311 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP----------------- 353
           S+L  L+ELY+ R+QL+  P ++  L++L +LD+S N ++ +P                 
Sbjct: 166 STLGTLKELYISRVQLQTIPEEVFALEELEVLDISNNKVKYLPVKLGKLYRLRVLKLGGN 225

Query: 354 -----EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
                E    L  L ELDLSD  + ++P E   L  +L+ L+L+ N +R+I
Sbjct: 226 NVCSFEVMPALQCLEELDLSDMRLKSIPKEAFYL-TNLKTLKLNNNKIRTI 275



 Score = 38.1 bits (87), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 23/131 (17%)

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           D    + SL E     S+P      L    L      + +++ ++ LDL  N L SIP+ 
Sbjct: 16  DSDAEVQSLEEESGKPSIPSHLHFDLSDRCLSHLSVGVCKMEDIQSLDLRSNYLTSIPDD 75

Query: 356 FKN----------------------LTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
            +N                      L +L ELDLS+ N+ ++P E+  +  SL+ LR+  
Sbjct: 76  IENLRNLKVLNLSGNRIVEYSFLSKLRTLVELDLSNQNLRSIPEEVFNIH-SLEILRVAN 134

Query: 394 NPLRSIRRTIL 404
           N +  I ++IL
Sbjct: 135 NGITEIPKSIL 145


>gi|456823117|gb|EMF71587.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 389

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 163/350 (46%), Gaps = 43/350 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDI------------- 157

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 158 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 195 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 252

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L LS N 
Sbjct: 253 KNLQTLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 310

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L  +P+    L +L  L L  N ++ LP E+  L+ +LQ L L+ N   S
Sbjct: 311 LIILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK-NLQTLYLNNNQFSS 359



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 164/345 (47%), Gaps = 40/345 (11%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+  L  +P  IG L  L RL LH N++  +P  I    +L   Y+ +N L+ LP E+ +
Sbjct: 54  SRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQ 113

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL SNQL     E  QL+ L +L L +N L+ L  +I ++  L+ L L+ N L
Sbjct: 114 LKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQL 173

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
            TL + +        LK L+S L  +E+  A+  KE  I     L V    L L    ++
Sbjct: 174 TTLPNEIEQ------LKNLKS-LYLSENQFATFPKE--IGQLQNLKV----LFLNNNQIT 220

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P+EI +  ++  L LS N +  LP E+    +LQTL LS N++   P  +   L +L 
Sbjct: 221 ILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEV-GQLENLQ 279

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 329
            L L NN L+ +P +                            L +LQ L+L   QL   
Sbjct: 280 TLDLRNNQLKTLPKE-------------------------IEQLKNLQTLFLSNNQLIIL 314

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           P +I +L+ L  L L  N L ++P   + L +L  L L++N  S+
Sbjct: 315 PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 359



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 137/291 (47%), Gaps = 42/291 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS   L  LP EIGK+  L++L L  N L  L   +       LL YLRS   
Sbjct: 46  LEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL-YLRSN-- 102

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                             L+ +P EI +   +  LDL  N +  
Sbjct: 103 ---------------------------------RLTTLPKEIEQLKNLQVLDLGSNQLTV 129

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQ L L  N++      I   L +L  L L NN L  +P++  + +  L+
Sbjct: 130 LPQEIEQLKNLQLLYLHSNRLTTLSKDI-EQLQNLKSLDLSNNQLTTLPNE-IEQLKNLK 187

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L LS N  A+ P+      L +L+ L+L   Q+   P +I +L++L+ L LS N L ++
Sbjct: 188 SLYLSENQFATFPK--EIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITL 245

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P+  + L +L  LDLS N ++ LP E+G LE +LQ L L  N L+++ + I
Sbjct: 246 PKEIEQLKNLQTLDLSYNQLTILPKEVGQLE-NLQTLDLRNNQLKTLPKEI 295



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 82/176 (46%), Gaps = 25/176 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  
Sbjct: 163 LKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI 221

Query: 61  IPSSISGCCSLAEFYMGNNAL-----------------------SALPAELGKLSKLGTL 97
           +P+ I+    L   Y+ +N L                       + LP E+G+L  L TL
Sbjct: 222 LPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTL 281

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           DL +NQLK    E  QL+ L  L LSNN L  LP EIGK+  L  L L  N L TL
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLIILPQEIGKLKNLLWLSLVYNQLTTL 337


>gi|91091582|ref|XP_968188.1| PREDICTED: similar to shoc2 [Tribolium castaneum]
 gi|270001034|gb|EEZ97481.1| hypothetical protein TcasGA2_TC011315 [Tribolium castaneum]
          Length = 565

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 198/421 (47%), Gaps = 21/421 (4%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  NKL  + + ++   T LT L    N +  + + I  L+ L  L L +N+I  +P+
Sbjct: 158 LDLRHNKLNDIPD-VVYKLTSLTTLFLRFNRIRYVDDEIRFLTSLTMLSLRENKIKELPA 216

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I    +L  F + +N L  LP E+G+   L TLDL  N+L +      +L +L+ L L 
Sbjct: 217 GIGKLVNLVTFDVSHNHLEHLPEEIGQCINLSTLDLQHNELLDIPDTIGELQQLTRLGLR 276

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N LS +P  +     + +  + GN +    S L  G   +L +     L  N  +   +
Sbjct: 277 YNRLSFIPSSLSNCRHMDEFNVEGNAI----SQLPEGLLSSLSELTSITLSRNNFAAYPS 332

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSC 241
                 T           ++LE   +  IP  I+  A  +TKL++  N +  LP ++ + 
Sbjct: 333 GGPSQFT-------NVDSINLEHNQIDKIPYGIFSRAKHLTKLNMKENQLTSLPLDVGTW 385

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 300
            ++  L L  N++   PD I  +L +L  L L NN LR++P     ++  L++LDL  N 
Sbjct: 386 TNMVELNLGTNQLGKLPDDI-QALQALEVLVLSNNLLRRIPP-SVGNLRKLRVLDLEENR 443

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
           +  LP       L  LQ L ++  QL   P  I  L  L  L + +N+L  +PE    L 
Sbjct: 444 LEQLPNE--IGYLRDLQRLIVQSNQLTSLPRAIGHLANLVFLSVGENNLAYLPEEIGTLE 501

Query: 361 SLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           +L  L ++DN ++  LP EL L   +LQ + ++  PL  I   I+  G   V++YLK + 
Sbjct: 502 NLESLYVNDNPSLHNLPFELALCS-NLQIMSIENCPLSQIPAEIVAGGPSLVIQYLKMQG 560

Query: 420 P 420
           P
Sbjct: 561 P 561



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 182/401 (45%), Gaps = 57/401 (14%)

Query: 48  LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 107
           L RLDL ++ I  +P ++     L+E Y+  N L  LP E+G L+ L TL L  N L   
Sbjct: 86  LKRLDLSKSNITHLPPTVRDLIHLSELYLYGNKLVYLPLEIGCLTNLQTLALSENSLTSL 145

Query: 108 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
                 L+ L VLDL +N L+ +P  + K+T+L  L L  N +R +   +         +
Sbjct: 146 PDSLMSLKSLKVLDLRHNKLNDIPDVVYKLTSLTTLFLRFNRIRYVDDEI---------R 196

Query: 167 YLRS----RLPENEDSEASTTKEDLITMATRLSVTSKELSL------EGMNLSA------ 210
           +L S     L EN+  E       L+ + T   V+   L        + +NLS       
Sbjct: 197 FLTSLTMLSLRENKIKELPAGIGKLVNLVT-FDVSHNHLEHLPEEIGQCINLSTLDLQHN 255

Query: 211 ----IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
               IP  I E  ++T+L L  N +  +P  LS+C  +    +  N I   P+ +L+SLS
Sbjct: 256 ELLDIPDTIGELQQLTRLGLRYNRLSFIPSSLSNCRHMDEFNVEGNAISQLPEGLLSSLS 315

Query: 267 SLSCLKLDNNPLRQVPSDG---FKDIPML-----QILDLSYNIAS---------LPENPP 309
            L+ + L  N     PS G   F ++  +     QI  + Y I S         + EN  
Sbjct: 316 ELTSITLSRNNFAAYPSGGPSQFTNVDSINLEHNQIDKIPYGIFSRAKHLTKLNMKEN-Q 374

Query: 310 FSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
            +SLP       ++ EL L   QL + P DI  LQ L +L LS N L+ IP    NL  L
Sbjct: 375 LTSLPLDVGTWTNMVELNLGTNQLGKLPDDIQALQALEVLVLSNNLLRRIPPSVGNLRKL 434

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             LDL +N +  LP E+G L   LQ L +  N L S+ R I
Sbjct: 435 RVLDLEENRLEQLPNEIGYLR-DLQRLIVQSNQLTSLPRAI 474



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 17/222 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  +++E N++  +   + +    LT+L   +N L  +P  +G+ + ++ L+L  N++  
Sbjct: 341 VDSINLEHNQIDKIPYGIFSRAKHLTKLNMKENQLTSLPLDVGTWTNMVELNLGTNQLGK 400

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    + NN L  +P  +G L KL  LDL  N+L++   E   LR L  L
Sbjct: 401 LPDDIQALQALEVLVLSNNLLRRIPPSVGNLRKLRVLDLEENRLEQLPNEIGYLRDLQRL 460

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            + +N L+ LP  IG +  L  L +  N L  L         P  +  L     EN +S 
Sbjct: 461 IVQSNQLTSLPRAIGHLANLVFLSVGENNLAYL---------PEEIGTL-----ENLESL 506

Query: 180 ASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAG 219
                  L  +   L++ S  + +S+E   LS IP+EI   G
Sbjct: 507 YVNDNPSLHNLPFELALCSNLQIMSIENCPLSQIPAEIVAGG 548


>gi|418702929|ref|ZP_13263821.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410767473|gb|EKR38148.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 328

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 161/349 (46%), Gaps = 64/349 (18%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL  NR  ++P  I    +L +  +  N +  +P E+ KL KL +L L +NQL     E
Sbjct: 25  LDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQE 84

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL +L  L L  N L+ LP EIG++  L+ L L+ N ++T+   +        L+ L+
Sbjct: 85  IGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEK------LQKLQ 138

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           S                              L L+   L+ +P EI +   +  LDLS N
Sbjct: 139 S------------------------------LGLDNNQLTTLPQEIGQLQNLQSLDLSTN 168

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP E+    +LQ L L  N++   P+ I   L +L  L L NN L  +     K+I
Sbjct: 169 RLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-GQLKNLQTLNLRNNRLTTLS----KEI 223

Query: 290 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
             LQ                     +L+ L LR  QL   P +I +L+ L++LDL  N L
Sbjct: 224 EQLQ---------------------NLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQL 262

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
            ++PEG   L +L  LDL  N ++ LP E+G L+ +LQ L L+ N L S
Sbjct: 263 TTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQ-NLQELFLNNNQLSS 310



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 145/300 (48%), Gaps = 23/300 (7%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N    +P+ IG L  L +L+L  N+I +IP  I     L   Y+ NN L+ LP E+G+
Sbjct: 28  SANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQ 87

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L KL  L L  NQL     E  QL+ L  L+LS N +  +P +I K+  L+ L L  N L
Sbjct: 88  LQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQL 147

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMN 207
            TL   +              +L   +  + ST +  L T+   +      ++L L    
Sbjct: 148 TTLPQEI-------------GQLQNLQSLDLSTNR--LTTLPQEIGHLQNLQDLYLVSNQ 192

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+ +P+EI +   +  L+L  N +  L  E+    +L++L L  N++  +P  I   L +
Sbjct: 193 LTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEI-GQLKN 251

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L L +N L  +P +G   +  LQ LDL  N + +LP+      L +LQEL+L   QL
Sbjct: 252 LQVLDLGSNQLTTLP-EGIGQLKNLQTLDLDSNQLTTLPQ--EIGQLQNLQELFLNNNQL 308



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 117/272 (43%), Gaps = 39/272 (14%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
            N+LT L    I     L  L   KN L  +P+ IG L  L  L+L  N+I +IP  I  
Sbjct: 75  NNQLTTLPQE-IGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEK 133

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 126
              L    + NN L+ LP E+G+L  L +LDL +N+L     E   L+ L  L L +N L
Sbjct: 134 LQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQL 193

Query: 127 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 186
           + LP EIG++  L+ L L  N L TL   +                            E 
Sbjct: 194 TILPNEIGQLKNLQTLNLRNNRLTTLSKEI----------------------------EQ 225

Query: 187 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
           L  +        K L L    L+  P EI +   +  LDL  N +  LP  +    +LQT
Sbjct: 226 LQNL--------KSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQT 277

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
           L L  N++   P  I   L +L  L L+NN L
Sbjct: 278 LDLDSNQLTTLPQEI-GQLQNLQELFLNNNQL 308



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 117/228 (51%), Gaps = 7/228 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E   T +DL T A +  +  + L L       +P EI +   + KL+LS N I+ +P 
Sbjct: 2   QAEEPGTYQDL-TKALQNPLKVRTLDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPK 60

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+     LQ+L L  N++   P  I   L  L  L L  N L  +P +    +  L+ L+
Sbjct: 61  EIEKLQKLQSLYLPNNQLTTLPQEI-GQLQKLQWLYLPKNQLTTLPQE-IGQLKNLKSLN 118

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           LSYN I ++P+      L  LQ L L   QL   P +I +LQ L+ LDLS N L ++P+ 
Sbjct: 119 LSYNQIKTIPK--KIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE 176

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             +L +L +L L  N ++ LP E+G L+ +LQ L L  N L ++ + I
Sbjct: 177 IGHLQNLQDLYLVSNQLTILPNEIGQLK-NLQTLNLRNNRLTTLSKEI 223


>gi|410939195|ref|ZP_11371030.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410785700|gb|EKR74656.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 410

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 173/371 (46%), Gaps = 64/371 (17%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G++LT L    I     L  L  + N L+ +P+ IG L  L RL L  N++ S+P 
Sbjct: 77  LELTGSQLTSLPKE-IGRLQNLQGLFLNINRLSSLPQEIGQLQNLKRLFLSLNQLTSLPK 135

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  + +N  + LP E+G+L  L  LDL  NQ      E  QL+ L  LDLS
Sbjct: 136 EIGQLQNLQELDLSSNRFTTLPKEIGQLQNLQELDLSGNQFTTLPKEIGQLQNLQKLDLS 195

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN  + LP E+G++ +L +L L+GN   TL       P     K +R R           
Sbjct: 196 NNRFTTLPKEVGQLQSLEELDLSGNQFTTL-------P-----KEIRRR----------- 232

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                           + L+L G  L+++  EI +   +  LDLS+N    LP E+    
Sbjct: 233 -------------QNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTTLPKEIGQLQ 279

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           +L+TL LS N+   +P  +     +++ L LD+N L+ +P    K+I   Q         
Sbjct: 280 NLETLNLSGNRFTTFPKEVRRQ-ENITWLYLDDNQLKALP----KEIGQFQ--------- 325

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
                       HL+ L+L+  QL   P +I +LQ L+ LDLS+N   + P+  + L +L
Sbjct: 326 ------------HLEGLFLKGNQLTSLPKEIEQLQNLQQLDLSKNRFTTFPKEIEQLQNL 373

Query: 363 TELDLSDNNIS 373
             L L  N+ S
Sbjct: 374 KLLRLYSNSFS 384



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 149/331 (45%), Gaps = 41/331 (12%)

Query: 74  FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE 132
           F      L+++P  +G+L  L  L+L  +QL     E  +L+ L  L L+ N LS LP E
Sbjct: 54  FLFNREQLTSIPNAIGRLQNLRILELTGSQLTSLPKEIGRLQNLQGLFLNINRLSSLPQE 113

Query: 133 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 192
           IG++  L++L L+ N L +L         P  +  L++    +  S   TT    I    
Sbjct: 114 IGQLQNLKRLFLSLNQLTSL---------PKEIGQLQNLQELDLSSNRFTTLPKEIGQLQ 164

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
            L    +EL L G   + +P EI +   + KLDLS N    LP E+    SL+ L LS N
Sbjct: 165 NL----QELDLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQSLEELDLSGN 220

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSS 312
           +    P  I     ++  L L  N L  + S        LQ LDLS N         F++
Sbjct: 221 QFTTLPKEI-RRRQNIRWLNLAGNQLTSL-SKEIGQFQNLQGLDLSKN--------RFTT 270

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           LP                 +I +LQ L  L+LS N   + P+  +   ++T L L DN +
Sbjct: 271 LPK----------------EIGQLQNLETLNLSGNRFTTFPKEVRRQENITWLYLDDNQL 314

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            ALP E+G  +  L+ L L GN L S+ + I
Sbjct: 315 KALPKEIGQFQ-HLEGLFLKGNQLTSLPKEI 344



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 27/199 (13%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L++IP+ I     +  L+L+ + +  LP E+    +LQ L L+ N++   P  I   L +
Sbjct: 61  LTSIPNAIGRLQNLRILELTGSQLTSLPKEIGRLQNLQGLFLNINRLSSLPQEI-GQLQN 119

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L  L L  N L  +P    K+I  LQ                     +LQEL L   +  
Sbjct: 120 LKRLFLSLNQLTSLP----KEIGQLQ---------------------NLQELDLSSNRFT 154

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
             P +I +LQ L+ LDLS N   ++P+    L +L +LDLS+N  + LP E+G L+ SL+
Sbjct: 155 TLPKEIGQLQNLQELDLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQ-SLE 213

Query: 388 ALRLDGNPLRSIRRTILDR 406
            L L GN   ++ + I  R
Sbjct: 214 ELDLSGNQFTTLPKEIRRR 232



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 87/159 (54%), Gaps = 6/159 (3%)

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASL 304
           + + +R ++   P+AI   L +L  L+L  + L  +P +    +  LQ L L+ N ++SL
Sbjct: 53  SFLFNREQLTSIPNAI-GRLQNLRILELTGSQLTSLPKE-IGRLQNLQGLFLNINRLSSL 110

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
           P+      L +L+ L+L   QL   P +I +LQ L+ LDLS N   ++P+    L +L E
Sbjct: 111 PQ--EIGQLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFTTLPKEIGQLQNLQE 168

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           LDLS N  + LP E+G L+ +LQ L L  N   ++ + +
Sbjct: 169 LDLSGNQFTTLPKEIGQLQ-NLQKLDLSNNRFTTLPKEV 206


>gi|353230339|emb|CCD76510.1| cell polarity protein [Schistosoma mansoni]
          Length = 1450

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 130/409 (31%), Positives = 201/409 (49%), Gaps = 28/409 (6%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
            +D   +KL  + +++I ++  L E     N +  +P+    L+R+  L L  N +  +P
Sbjct: 17  HIDRRHSKLEQVPDDVIRNFRTLEECRLDANQIKELPKNSLRLTRIRLLTLSDNELTRLP 76

Query: 63  SSISGCCSLAEFYMGNNAL--SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           + I    +L E  +  N +  + LPA +     L +LD+ +N L+      CQLR L VL
Sbjct: 77  TGIGSFSNLVELDISRNGMISAELPASIRFCDSLQSLDVSNNPLQSLPAGFCQLRNLRVL 136

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++ S++ LP EIG +  L KL L  N L+++  S  +     L+      L  NE  E
Sbjct: 137 CLNDISIAELPEEIGSLQLLEKLELRDNCLKSIPDSFAD-----LIHLEFLDLGANEFQE 191

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            S     +I   ++LS    EL ++   L ++P E+   G + +LDLS N I  LP  +S
Sbjct: 192 LSP----VIGQLSQLS----ELWIDDNELRSLPKELGNLGNLQQLDLSENLISTLPESIS 243

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV-PSDGFKDIPMLQILDLS 298
              SL  L LS+N I   P+  L  L  L  LKL+ N L  V P+ G  +   LQ L L+
Sbjct: 244 GLVSLSDLNLSQNSITHLPNG-LGDLDKLIILKLNQNRLLTVTPTIG--NCSSLQELYLT 300

Query: 299 YNIAS-LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N  S LP +    +L  +  L + + QL E P++I +   L IL L +N+L  +P+   
Sbjct: 301 ENFLSKLPSS--IGNLVSMFHLNVDQNQLTELPSEIGQCTSLNILSLRENNLHRLPDEIG 358

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN---PLRSIRRTI 403
           N T L  LD+S N +  LP    L   SL AL L  N   P+ +++R +
Sbjct: 359 NCTRLRVLDVSGNRLDRLP--FSLSRCSLTALWLSQNQSQPVITLQRDV 405



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 90/157 (57%), Gaps = 2/157 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N ++ L  + I+    L++L  S+N +  +P  +G L +LI L L+QNR+L+
Sbjct: 225 LQQLDLSENLISTLPES-ISGLVSLSDLNLSQNSITHLPNGLGDLDKLIILKLNQNRLLT 283

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +  +I  C SL E Y+  N LS LP+ +G L  +  L++  NQL E   E  Q   L++L
Sbjct: 284 VTPTIGNCSSLQELYLTENFLSKLPSSIGNLVSMFHLNVDQNQLTELPSEIGQCTSLNIL 343

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            L  N+L  LP EIG  T LR L ++GN L  L  SL
Sbjct: 344 SLRENNLHRLPDEIGNCTRLRVLDVSGNRLDRLPFSL 380


>gi|379728469|ref|YP_005320665.1| putative lipoprotein [Saprospira grandis str. Lewin]
 gi|378574080|gb|AFC23081.1| putative lipoprotein [Saprospira grandis str. Lewin]
          Length = 484

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 168/354 (47%), Gaps = 16/354 (4%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +PE IG L  L  L L+   I  +P+SI    +L    +GN  L  LP  LG+L  L
Sbjct: 94  LEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLRILDLGNCQLQQLPEGLGQLQAL 153

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L+L +NQL+E      QL+ L + DLS+N L  LP E  ++T L +L L  N L  L 
Sbjct: 154 EALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALENNLLSFLP 213

Query: 154 SS---LVNGPTPALLKYLRSRLPEN-----EDSEASTTKEDLITMATRLSVTSK--ELSL 203
           S+   LV   T  L +    +LP +     +         DL  +  ++       EL L
Sbjct: 214 SNFGGLVALKTLVLAENQLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELDL 273

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
               L  +P EI +   +  L ++ N +Q+LP E +   +LQ L L  NK+   P     
Sbjct: 274 SDNFLQQLPPEIGQLQALKSLFITENELQQLPAEFAQLKNLQELQLQENKLTALPRNF-G 332

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
            LS L  L+L  N L  +P    K +  L  L+LS N I   P+N   S + +L  L L 
Sbjct: 333 KLSQLEELQLSENKLEALPK-SIKRLKKLSSLNLSNNEIYLFPKNA--SGIKNLIALDLE 389

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
              + E P +I  LQ L  L L  N L+++P   ++L++L  LD+SDN   A P
Sbjct: 390 GNYIEELPEEIQELQNLEFLILYDNELRNLPPYLQDLSALRRLDISDNEFEAFP 443



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 153/349 (43%), Gaps = 45/349 (12%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N L  +P +IG L  L   DL  NR+  +P+  S    L E  + NN LS LP+  G 
Sbjct: 159 SANQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALENNLLSFLPSNFGG 218

Query: 91  LSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L TL L  NQL +         +L +L+L +N L  LP +IG++ +L +L L+ N L
Sbjct: 219 LVALKTLVLAENQLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELDLSDNFL 278

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
           + L       P    L+ L+S                       L +T  EL        
Sbjct: 279 QQL------PPEIGQLQALKS-----------------------LFITENEL-------Q 302

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P+E  +   + +L L  N +  LP      + L+ L LS NK++  P +I   L  LS
Sbjct: 303 QLPAEFAQLKNLQELQLQENKLTALPRNFGKLSQLEELQLSENKLEALPKSI-KRLKKLS 361

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
            L L NN +   P +    I  L  LDL  N I  LPE      L +L+ L L   +LR 
Sbjct: 362 SLNLSNNEIYLFPKNA-SGIKNLIALDLEGNYIEELPEE--IQELQNLEFLILYDNELRN 418

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            P  +  L  LR LD+S N  ++ PE    +  L +L L   N+    P
Sbjct: 419 LPPYLQDLSALRRLDISDNEFEAFPEVLYQMRQLKDLIL---NVDQFEP 464



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 146/329 (44%), Gaps = 43/329 (13%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYM-GNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
           L L +  + S+P++I     L    + G  AL  LP E+G+L  L  L L+S  +K    
Sbjct: 63  LVLEEEELSSLPATIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPA 122

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
              QL+ L +LDL N  L  LP  +G++  L  L L+ N L  L  S+  G   AL    
Sbjct: 123 SIGQLQNLRILDLGNCQLQQLPEGLGQLQALEALNLSANQLEELPPSI--GQLQAL---- 176

Query: 169 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
                                         K   L    L  +P+E  +  ++ +L L  
Sbjct: 177 ------------------------------KMADLSSNRLQELPNEFSQLTQLEELALEN 206

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +  LP       +L+TL+L+ N++   P ++            DN+ L Q+P+     
Sbjct: 207 NLLSFLPSNFGGLVALKTLVLAENQLDQLPASLGQLKQLELLELQDND-LGQLPAQ-IGQ 264

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  L  LDLS N +  LP  P    L  L+ L++   +L++ P +  +L+ L+ L L +N
Sbjct: 265 LQSLVELDLSDNFLQQLP--PEIGQLQALKSLFITENELQQLPAEFAQLKNLQELQLQEN 322

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALP 376
            L ++P  F  L+ L EL LS+N + ALP
Sbjct: 323 KLTALPRNFGKLSQLEELQLSENKLEALP 351



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 144/302 (47%), Gaps = 42/302 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +E N L+ L +N       L  L+ ++N L+ +P ++G L +L  L+L  N +  
Sbjct: 199 LEELALENNLLSFLPSN-FGGLVALKTLVLAENQLDQLPASLGQLKQLELLELQDNDLGQ 257

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    SL E  + +N L  LP E+G+L  L +L +  N+L++   E  QL+ L  L
Sbjct: 258 LPAQIGQLQSLVELDLSDNFLQQLPPEIGQLQALKSLFITENELQQLPAEFAQLKNLQEL 317

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N L+ LP   GK++ L +L L+ N L  L         P  +K L+          
Sbjct: 318 QLQENKLTALPRNFGKLSQLEELQLSENKLEAL---------PKSIKRLKK--------- 359

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                       + L++++ E+ L   N S I +       +  LDL  N I+ELP E+ 
Sbjct: 360 -----------LSSLNLSNNEIYLFPKNASGIKN-------LIALDLEGNYIEELPEEIQ 401

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+ LIL  N++++ P   L  LS+L  L + +N     P   ++   M Q+ DL  
Sbjct: 402 ELQNLEFLILYDNELRNLP-PYLQDLSALRRLDISDNEFEAFPEVLYQ---MRQLKDLIL 457

Query: 300 NI 301
           N+
Sbjct: 458 NV 459



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 141/306 (46%), Gaps = 45/306 (14%)

Query: 5   DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 64
           D+  N+L  L N   +  T L EL    NLL+ +P   G L  L  L L +N++  +P+S
Sbjct: 180 DLSSNRLQELPNE-FSQLTQLEELALENNLLSFLPSNFGGLVALKTLVLAENQLDQLPAS 238

Query: 65  ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 124
           +     L    + +N L  LPA++G+L  L              VE        LDLS+N
Sbjct: 239 LGQLKQLELLELQDNDLGQLPAQIGQLQSL--------------VE--------LDLSDN 276

Query: 125 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTT 183
            L  LPPEIG++  L+ L +T N L+ L +        A LK L+  +L EN+       
Sbjct: 277 FLQQLPPEIGQLQALKSLFITENELQQLPAEF------AQLKNLQELQLQENK------- 323

Query: 184 KEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
              L  +       S+  EL L    L A+P  I    +++ L+LS N I   P   S  
Sbjct: 324 ---LTALPRNFGKLSQLEELQLSENKLEALPKSIKRLKKLSSLNLSNNEIYLFPKNASGI 380

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 300
            +L  L L  N I++ P+ I   L +L  L L +N LR +P    +D+  L+ LD+S N 
Sbjct: 381 KNLIALDLEGNYIEELPEEI-QELQNLEFLILYDNELRNLPP-YLQDLSALRRLDISDNE 438

Query: 301 IASLPE 306
             + PE
Sbjct: 439 FEAFPE 444



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 148/322 (45%), Gaps = 43/322 (13%)

Query: 81  LSALPAELGKLSKLGTLDLHSNQ--LKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           +SA P+   K  K   LDL   +  L+   +    +    L L    LS LP  IG+ + 
Sbjct: 23  MSAAPSGQAKAVKEQYLDLEDGRRLLQAERLADLDISYQALVLEEEELSSLPATIGQYSE 82

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           LR L L G                AL       LPE             I     L V  
Sbjct: 83  LRYLSLWG--------------QEAL-----EELPEE------------IGQLQNLEV-- 109

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
             L L    +  +P+ I +   +  LDL    +Q+LP  L    +L+ L LS N++++ P
Sbjct: 110 --LILNSTGIKRLPASIGQLQNLRILDLGNCQLQQLPEGLGQLQALEALNLSANQLEELP 167

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHLQ 317
            +I   L +L    L +N L+++P++ F  +  L+ L L  N+ S LP N  F  L  L+
Sbjct: 168 PSI-GQLQALKMADLSSNRLQELPNE-FSQLTQLEELALENNLLSFLPSN--FGGLVALK 223

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L L   QL + P  + +L+QL +L+L  N L  +P     L SL ELDLSDN +  LPP
Sbjct: 224 TLVLAENQLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELDLSDNFLQQLPP 283

Query: 378 ELGLLEPSLQALRLDGNPLRSI 399
           E+G L+ +L++L +  N L+ +
Sbjct: 284 EIGQLQ-ALKSLFITENELQQL 304


>gi|418668203|ref|ZP_13229606.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756060|gb|EKR17687.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 378

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 163/350 (46%), Gaps = 43/350 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 52  LDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE 111

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 112 IEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDI------------- 158

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 159 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 195

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 196 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 253

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L LS N 
Sbjct: 254 KNLQTLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 311

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L  +P+    L +L  L L  N ++ LP E+  L+ +LQ L L+ N   S
Sbjct: 312 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK-NLQTLYLNNNQFSS 360



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 164/345 (47%), Gaps = 40/345 (11%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+  L  +P  IG L  L RL LH N++  +P  I    +L   Y+ +N L+ LP E+ +
Sbjct: 55  SRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQ 114

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL SNQL     E  QL+ L +L L +N L+ L  +I ++  L+ L L+ N L
Sbjct: 115 LKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQL 174

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
            TL + +        LK L+S L  +E+  A+  KE  I     L V    L L    ++
Sbjct: 175 TTLPNEIEQ------LKNLKS-LYLSENQFATFPKE--IGQLQNLKV----LFLNNNQIT 221

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P+EI +  ++  L LS N +  LP E+    +LQTL LS N++   P  +   L +L 
Sbjct: 222 ILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEV-GQLENLQ 280

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 329
            L L NN L+ +P +                            L +LQ L+L   QL   
Sbjct: 281 TLDLRNNQLKTLPKE-------------------------IEQLKNLQTLFLSNNQLTIL 315

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           P +I +L+ L  L L  N L ++P   + L +L  L L++N  S+
Sbjct: 316 PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 360



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 138/291 (47%), Gaps = 42/291 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS   L  LP EIG++  L++L L  N L  L   +       LL YLRS   
Sbjct: 47  LEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL-YLRSN-- 103

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                             L+ +P+EI +   +  LDL  N +  
Sbjct: 104 ---------------------------------RLTTLPNEIEQLKNLQVLDLGSNQLTI 130

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQ L L  N++      I   L +L  L L NN L  +P++  + +  L+
Sbjct: 131 LPQEIEQLKNLQLLYLHSNRLTTLSKDI-EQLQNLKSLDLSNNQLTTLPNE-IEQLKNLK 188

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L LS N  A+ P+      L +L+ L+L   Q+   P +I +L++L+ L LS N L ++
Sbjct: 189 SLYLSENQFATFPK--EIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITL 246

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P+  + L +L  LDLS N ++ LP E+G LE +LQ L L  N L+++ + I
Sbjct: 247 PKEIEQLKNLQTLDLSYNQLTILPKEVGQLE-NLQTLDLRNNQLKTLPKEI 296



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 133/301 (44%), Gaps = 40/301 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L +  N+LT L N  I     L  L    N L  +P+ I  L  L  L LH NR+ ++  
Sbjct: 98  LYLRSNRLTTLPNE-IEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSK 156

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    + NN L+ LP E+ +L  L +L L  NQ   +  E  QL+ L VL L+
Sbjct: 157 DIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLN 216

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN ++ LP EI K+  L+ L L+ N L TL   +                          
Sbjct: 217 NNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI-------------------------- 250

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
             E L  + T        L L    L+ +P E+ +   +  LDL  N ++ LP E+    
Sbjct: 251 --EQLKNLQT--------LDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLK 300

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           +LQTL LS N++   P  I   L +L  L L  N L  +P++  + +  LQ L L+ N  
Sbjct: 301 NLQTLFLSNNQLTILPQEI-GKLKNLLWLSLVYNQLTTLPNE-IEQLKNLQTLYLNNNQF 358

Query: 303 S 303
           S
Sbjct: 359 S 359



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 83/176 (47%), Gaps = 25/176 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  
Sbjct: 164 LKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI 222

Query: 61  IPSSISGCCSLAEFYMGNNAL-----------------------SALPAELGKLSKLGTL 97
           +P+ I+    L   Y+ +N L                       + LP E+G+L  L TL
Sbjct: 223 LPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTL 282

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           DL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  L L  N L TL
Sbjct: 283 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTL 338



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L  L    I     L  L  S N L  +P+ IG L  L+ L L  N++ +
Sbjct: 279 LQTLDLRNNQLKTLPKE-IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTT 337

Query: 61  IPSSISGCCSLAEFYMGNNALSA 83
           +P+ I    +L   Y+ NN  S+
Sbjct: 338 LPNEIEQLKNLQTLYLNNNQFSS 360


>gi|444709489|gb|ELW50501.1| Leucine-rich repeat protein SHOC-2 [Tupaia chinensis]
          Length = 535

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 191/398 (47%), Gaps = 43/398 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 124 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 182

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  L KL  L +  N++K+   E  +L  L  L
Sbjct: 183 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLIMLSIRENKIKQLPAEIGELCNLITL 242

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 243 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 281

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 238
                  L ++          L L    LSAIP  + +   + +L+L  N+I  LP  L 
Sbjct: 282 -------LCSL--------NRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 326

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 327 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 386

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L  L L+ N L ++P G  
Sbjct: 387 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLISLEKLVLTNNQLTTLPRGIG 444

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           +LT+LT L L +N ++ LP E+G LE +L+ L L+ NP
Sbjct: 445 HLTNLTHLGLGENLLTHLPEEIGTLE-NLEELYLNDNP 481



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 109/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +P+ I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 101 SMRLDLSKRSIHILPTSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 160

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +LP L 
Sbjct: 161 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLPKLI 217

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 218 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 277

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 278 TIGNL-CSLNRLGLRYNRLSAIPRSL 302



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 5/156 (3%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +SKL+++ N+LT L  +   +WT + EL  + N L  +PE +  L  L +L L  N++ +
Sbjct: 380 LSKLNMKDNQLTSLPLDF-GTWTSMVELNLATNQLTKIPEDVSGLISLEKLVLTNNQLTT 438

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN-QLKEYCVE-ACQLRLSV 118
           +P  I    +L    +G N L+ LP E+G L  L  L L+ N  L     E A   +LS+
Sbjct: 439 LPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 498

Query: 119 LDLSNNSLSGLPPEI--GKMTTLRKLLLTGNPLRTL 152
           + + N  LS LPP+I  G  + + + L    P R +
Sbjct: 499 MSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAM 534



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 134/298 (44%), Gaps = 45/298 (15%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L  L  + N L  +P+ IG+ +++  LDL  N +L +P +I   CSL    +  
Sbjct: 233 IGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLCSLNRLGLRY 292

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKM 136
           N LSA+P  L K S L  L+L +N +      + +  ++L+ L L+ N     P      
Sbjct: 293 NRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYP------ 346

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
                               V GP+     Y       + + E +   +    + +R  V
Sbjct: 347 --------------------VGGPSQFSTIY-------SLNMEHNRINKIPFGIFSRAKV 379

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
            SK L+++   L+++P +      + +L+L+ N + ++P ++S   SL+ L+L+ N++  
Sbjct: 380 LSK-LNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLISLEKLVLTNNQLTT 438

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 314
            P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y    L +NP   SLP
Sbjct: 439 LPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY----LNDNPNLHSLP 487



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 123/289 (42%), Gaps = 71/289 (24%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+L  L RL L  NR+ +IP 
Sbjct: 242 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLCSLNRLGLRYNRLSAIPR 300

Query: 64  SISGCCSLAEFYMGNNALSALPAEL-------------------------GKLSKLGTLD 98
           S++ C +L E  + NN +S LP  L                          + S + +L+
Sbjct: 301 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 360

Query: 99  LHSNQLKE--YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT------------------ 138
           +  N++ +  + + +    LS L++ +N L+ LP + G  T+                  
Sbjct: 361 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 420

Query: 139 -----LRKLLLTGNPLRTLR---SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 190
                L KL+LT N L TL      L N     L + L + LPE        T E+L   
Sbjct: 421 SGLISLEKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPE-----EIGTLENL--- 472

Query: 191 ATRLSVTSKELSL-EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                   +EL L +  NL ++P E+    +++ + +    +  LPP++
Sbjct: 473 --------EELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQI 513


>gi|440894992|gb|ELR47302.1| Leucine-rich repeat and IQ domain-containing protein 4, partial
           [Bos grunniens mutus]
          Length = 585

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 180/411 (43%), Gaps = 60/411 (14%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           GN L  L    I + T L E+    N     P  +  L  L  +DL +N++  IP  I  
Sbjct: 177 GNHLKSLPKE-IVNQTKLREIHLKHNQFAAFPLELCDLYNLEIIDLDKNKLTVIPEEIGN 235

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 127
              L +FY+  N+L+ LP  LG+ +                      RLSVLD+S N L 
Sbjct: 236 LTKLKKFYVSYNSLAVLPESLGRCT----------------------RLSVLDVSYNRLH 273

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            LP  +G+++ + ++ L+GN L  +   L+   T   L YL +            T   +
Sbjct: 274 ALPHTLGELSQMTEVGLSGNHLEKI-PRLLCRWTSLFLLYLHN------------TGLRV 320

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +  + R  V  + L L    L   P +I     +  L L  N I +LP +  S + L+ L
Sbjct: 321 LRRSFRRLVNLQFLDLSQNFLEHCPLQICSLKNLEVLALDDNKICQLPSDFGSLSKLKIL 380

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 307
            L+ N+   +P  IL SL+SL  L +  +       +G K             +  LPE 
Sbjct: 381 GLTGNQFSSFPKEIL-SLASLEKLYIGQD-------EGAK-------------LTHLPE- 418

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                L +L+ELY+    L   P  +  +  L ILD   N ++ +P+      +L EL  
Sbjct: 419 -CIKRLQNLKELYIENNHLEYLPVSLGSMPNLEILDCHCNLIKQLPDAICQAQALKELRF 477

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
            DN I+ LP  L  L  +L+ L L GNP+     ++  +GT+AV +YL+++
Sbjct: 478 EDNLITYLPENLDSL-VNLEVLTLTGNPMEEPPMSVCAKGTEAVWEYLRER 527



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 98/183 (53%), Gaps = 3/183 (1%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           +E+ LE   ++ IP +I    +I  L L++N ++ L PE+   ++L+ L LS N ++   
Sbjct: 77  EEVHLENNLIAEIPKDIQHLRKIRVLYLNKNKLKNLCPEMGRLSNLEGLDLSDNPLEASS 136

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
             +L+ +  L  L+L    L  +P    K +  L++L L+ N + SLP+     +   L+
Sbjct: 137 LPVLSGIRQLRELRLYRTDLADIPVVICKLLHHLELLGLAGNHLKSLPKE--IVNQTKLR 194

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           E++L+  Q    P ++  L  L I+DL +N L  IPE   NLT L +  +S N+++ LP 
Sbjct: 195 EIHLKHNQFAAFPLELCDLYNLEIIDLDKNKLTVIPEEIGNLTKLKKFYVSYNSLAVLPE 254

Query: 378 ELG 380
            LG
Sbjct: 255 SLG 257



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 1/106 (0%)

Query: 7   EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 66
           EG KLT L    I     L EL    N L  +P ++GS+  L  LD H N I  +P +I 
Sbjct: 409 EGAKLTHLPE-CIKRLQNLKELYIENNHLEYLPVSLGSMPNLEILDCHCNLIKQLPDAIC 467

Query: 67  GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 112
              +L E    +N ++ LP  L  L  L  L L  N ++E  +  C
Sbjct: 468 QAQALKELRFEDNLITYLPENLDSLVNLEVLTLTGNPMEEPPMSVC 513



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 40/63 (63%)

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           +L  L+E++L    + E P DI  L+++R+L L++N L+++      L++L  LDLSDN 
Sbjct: 72  ALRELEEVHLENNLIAEIPKDIQHLRKIRVLYLNKNKLKNLCPEMGRLSNLEGLDLSDNP 131

Query: 372 ISA 374
           + A
Sbjct: 132 LEA 134


>gi|410971089|ref|XP_003992006.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Felis catus]
          Length = 559

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 174/413 (42%), Gaps = 62/413 (15%)

Query: 7   EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 66
           +GN L  L   ++ + T L E+   +N     P  + +LS L  +DL  N++ +IP  I 
Sbjct: 150 DGNHLKSLPKEVV-NHTKLREIYLKQNQFEVFPPELCALSNLEIVDLDDNKLTAIPPEIG 208

Query: 67  GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNS 125
               L +FY+  N L  LP  L + SKL  LDL  N+L        +L  ++ + LS N 
Sbjct: 209 NLTRLQKFYVARNNLLLLPESLCQCSKLSVLDLSHNRLHSLPHSLAELSGMTEIGLSGNH 268

Query: 126 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 185
           L  +P  I K T+L  L L    LR LR S                              
Sbjct: 269 LEKVPRLICKWTSLHLLYLRDTGLRALRRSF----------------------------- 299

Query: 186 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 245
                  R  V  + L L   +L   P +I     +  L L  N I +LPP+  S + L+
Sbjct: 300 -------RRLVNLRFLDLSQNHLERFPLQICALRNLEILALDDNKICQLPPDFVSLSKLK 352

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 305
            L L+ N++  +P+ IL SL SL  L +                      D    +  +P
Sbjct: 353 MLGLTGNQLASFPEEIL-SLQSLEKLYIGQ--------------------DQGAKLTYMP 391

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
           E+   S L +L+ELY+    L   PT +  +  L IL+   N L+ +P+      +L EL
Sbjct: 392 ED--ISKLQNLKELYIENNHLEYLPTSLGSMPNLEILNCCHNLLKQLPDSICQAQALKEL 449

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
            L DN I+ LP  L  L  +L+ L L  NP+      +   G +A+  YLK K
Sbjct: 450 LLEDNLITCLPENLDSLM-NLKVLTLMSNPMEDPPGEVCAEGNQAIWTYLKTK 501



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 156/361 (43%), Gaps = 18/361 (4%)

Query: 46  SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 105
           +R   +D     + +IP  I G   L E ++ NN +  +P  +  L  +  L L+ N+L+
Sbjct: 25  ARTFFIDASNQGLPTIPPEIFGFEELEEVHLENNQIEEIPRGIQHLKNVRILYLNKNKLR 84

Query: 106 EYCVEACQL-RLSVLDLSNNS-LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 163
           + C E   L  L  LDLS+N  LS   P +  +  LR+       LR   + L   P   
Sbjct: 85  KLCPELGTLSSLEGLDLSDNPLLSSALPVLRGLRGLRE-------LRLYHTDLAEIPVDL 137

Query: 164 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 223
                   L   + +   +  ++++   T+L    +E+ L+       P E+     +  
Sbjct: 138 CKLLHHLELLGLDGNHLKSLPKEVVN-HTKL----REIYLKQNQFEVFPPELCALSNLEI 192

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           +DL  N +  +PPE+ +   LQ   ++RN +   P++ L   S LS L L +N L  +P 
Sbjct: 193 VDLDDNKLTAIPPEIGNLTRLQKFYVARNNLLLLPES-LCQCSKLSVLDLSHNRLHSLPH 251

Query: 284 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
              +   M +I     ++  +P          L  LYLR   LR       RL  LR LD
Sbjct: 252 SLAELSGMTEIGLSGNHLEKVPR--LICKWTSLHLLYLRDTGLRALRRSFRRLVNLRFLD 309

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           LSQN L+  P     L +L  L L DN I  LPP+   L   L+ L L GN L S    I
Sbjct: 310 LSQNHLERFPLQICALRNLEILALDDNKICQLPPDFVSLS-KLKMLGLTGNQLASFPEEI 368

Query: 404 L 404
           L
Sbjct: 369 L 369


>gi|260802102|ref|XP_002595932.1| hypothetical protein BRAFLDRAFT_235470 [Branchiostoma floridae]
 gi|229281184|gb|EEN51944.1| hypothetical protein BRAFLDRAFT_235470 [Branchiostoma floridae]
          Length = 467

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 201/398 (50%), Gaps = 24/398 (6%)

Query: 29  IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 88
           +++ + L  +P+ +G+  +L  + L    +  IP+ +     L    +  N L ++P ++
Sbjct: 47  VSNNHRLEDLPDEVGNAQKLAHISLIHCSLQQIPAVVLSLKGLDILDLDRNKLQSIPDDI 106

Query: 89  GKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 147
             L  L  L L  NQL+         + L  L LS N L+ LP E+G +  LR+L L  N
Sbjct: 107 SNLQVLRELWLTGNQLESLPDSIGLLMNLQKLGLSRNKLTSLPDELGNLLFLRELWLRDN 166

Query: 148 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 207
            L TL +S+       ++  LR  L EN   + +   E++  M + L      L LEG N
Sbjct: 167 KLMTLPASI-----GEMVNLLRLNLEEN---KLTYLPEEMGKMESLLV-----LRLEGNN 213

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L +IP++I +   + +L LS N + +LP ++ +  +L+ L + +N+I+++P+  L+ LS+
Sbjct: 214 LRSIPAQIGQLSNLEELGLSENKLVKLPEDVCNLENLKELAMGKNRIEEFPEG-LSRLSN 272

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRM--- 324
           L  L  + N +  +P D  K   + ++   S      PE      L  L++LYL +    
Sbjct: 273 LESLFANQNRIAFLPRDIGKLRYLRELSIASNEFEDFPEE--VLDLTSLEKLYLGQWGGG 330

Query: 325 -QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            +    P +I  L +LR+L L  N+ +++P+  +NL  L EL L  N + ALP  +  L 
Sbjct: 331 EKFTVIPEEIGTLVRLRVLGLDSNAFRNVPDSIENLRHLRELYLDHNKLEALPDNISFLR 390

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
            +L++L +  N L+ +  T LD+ T+ + K+  +K P+
Sbjct: 391 -NLRSLDVGTNRLKRL-PTCLDKLTR-LKKFNVEKNPQ 425



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 177/393 (45%), Gaps = 86/393 (21%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  + SL  L  LDL +N++ SIP  IS    L E ++  N L +LP  +G L   
Sbjct: 76  LQQIPAVVLSLKGLDILDLDRNKLQSIPDDISNLQVLRELWLTGNQLESLPDSIGLL--- 132

Query: 95  GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 154
                              + L  L LS N L+ LP E+G +  LR+L L  N L TL +
Sbjct: 133 -------------------MNLQKLGLSRNKLTSLPDELGNLLFLRELWLRDNKLMTLPA 173

Query: 155 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 214
           S+       ++  LR  L EN+    +   E++  M + L      L LEG NL +IP++
Sbjct: 174 SI-----GEMVNLLRLNLEENK---LTYLPEEMGKMESLLV-----LRLEGNNLRSIPAQ 220

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           I +   + +L LS N + +LP ++ +  +L+ L + +N+I+++P+  L+ LS+L  L  +
Sbjct: 221 IGQLSNLEELGLSENKLVKLPEDVCNLENLKELAMGKNRIEEFPEG-LSRLSNLESLFAN 279

Query: 275 NNPLRQVPSD---------------GFKDIPMLQILDLS-------------YNIASLPE 306
            N +  +P D                F+D P  ++LDL+                  +PE
Sbjct: 280 QNRIAFLPRDIGKLRYLRELSIASNEFEDFPE-EVLDLTSLEKLYLGQWGGGEKFTVIPE 338

Query: 307 -------------------NPPFS--SLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
                              N P S  +L HL+ELYL   +L   P +I  L+ LR LD+ 
Sbjct: 339 EIGTLVRLRVLGLDSNAFRNVPDSIENLRHLRELYLDHNKLEALPDNISFLRNLRSLDVG 398

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
            N L+ +P     LT L + ++  N     PP+
Sbjct: 399 TNRLKRLPTCLDKLTRLKKFNVEKNPQLVYPPQ 431



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 116/222 (52%), Gaps = 30/222 (13%)

Query: 203 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAI 261
           L   NL  IP E++E  EI  L L  N ++ LP E+ +  +L+ L +S N +++D PD +
Sbjct: 1   LSNKNLETIPQEVFEIKEIEGLLLQDNDLESLPGEIGTLPNLRYLNVSNNHRLEDLPDEV 60

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 320
             +   L+ + L +  L+Q+P+     +  L ILDL  N + S+P++   S+L  L+EL+
Sbjct: 61  -GNAQKLAHISLIHCSLQQIPAVVLS-LKGLDILDLDRNKLQSIPDD--ISNLQVLRELW 116

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE---------------- 364
           L   QL   P  I  L  L+ L LS+N L S+P+   NL  L E                
Sbjct: 117 LTGNQLESLPDSIGLLMNLQKLGLSRNKLTSLPDELGNLLFLRELWLRDNKLMTLPASIG 176

Query: 365 -------LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
                  L+L +N ++ LP E+G +E SL  LRL+GN LRSI
Sbjct: 177 EMVNLLRLNLEENKLTYLPEEMGKME-SLLVLRLEGNNLRSI 217



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 154/332 (46%), Gaps = 19/332 (5%)

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNS-LSGLPPEI 133
           + N  L  +P E+ ++ ++  L L  N L+    E   L  L  L++SNN  L  LP E+
Sbjct: 1   LSNKNLETIPQEVFEIKEIEGLLLQDNDLESLPGEIGTLPNLRYLNVSNNHRLEDLPDEV 60

Query: 134 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 193
           G    L  + L    L+ + + +++     +L   R++L         +  +D+  +   
Sbjct: 61  GNAQKLAHISLIHCSLQQIPAVVLSLKGLDILDLDRNKL--------QSIPDDISNLQV- 111

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
                +EL L G  L ++P  I     + KL LSRN +  LP EL +   L+ L L  NK
Sbjct: 112 ----LRELWLTGNQLESLPDSIGLLMNLQKLGLSRNKLTSLPDELGNLLFLRELWLRDNK 167

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 313
           +   P +I   + +L  L L+ N L  +P +  K   +L +     N+ S+P       L
Sbjct: 168 LMTLPASI-GEMVNLLRLNLEENKLTYLPEEMGKMESLLVLRLEGNNLRSIPAQ--IGQL 224

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
            +L+EL L   +L + P D+  L+ L+ L + +N ++  PEG   L++L  L  + N I+
Sbjct: 225 SNLEELGLSENKLVKLPEDVCNLENLKELAMGKNRIEEFPEGLSRLSNLESLFANQNRIA 284

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
            LP ++G L   L+ L +  N        +LD
Sbjct: 285 FLPRDIGKLR-YLRELSIASNEFEDFPEEVLD 315


>gi|124286820|ref|NP_080944.2| leucine-rich repeat and IQ domain-containing protein 4 [Mus
           musculus]
 gi|187659940|sp|A6H6A4.1|LRIQ4_MOUSE RecName: Full=Leucine-rich repeat and IQ domain-containing protein
           4
 gi|148703018|gb|EDL34965.1| RIKEN cDNA 4930558O21, isoform CRA_b [Mus musculus]
 gi|148878288|gb|AAI45807.1| Leucine-rich repeats and IQ motif containing 4 [Mus musculus]
          Length = 596

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 184/402 (45%), Gaps = 65/402 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I + T L E+   +N     P  +  L  L  +DL +N++ SIP  I     L +FY+ +
Sbjct: 197 IVNQTKLREIYLKQNHFEVFPCDLCVLYNLEVIDLDENKLKSIPGDIGHLVRLQKFYVAS 256

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N L +LP  L + SKL                      SVLDL++NS+  LP  +  +T 
Sbjct: 257 NHLMSLPESLSQCSKL----------------------SVLDLTHNSIHSLPSSLELLTE 294

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L ++ L+GN L  +   L +  +  LL YLR+           T+   L     RL    
Sbjct: 295 LTEVGLSGNRLEKVPRLLCSWVSLHLL-YLRN-----------TSLHGLRDSFKRL---- 338

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
                  +NL               LDLS+N I+  P ++ +  +L+ L L  NK++  P
Sbjct: 339 -------INLRF-------------LDLSQNHIEHFPVQICALKNLEILALDDNKVRQLP 378

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL---DLSYNIASLPENPPFSSLPH 315
            +I + LS+L  L L  N L   P + F  I + ++    D    ++SLPEN     L +
Sbjct: 379 PSI-SLLSNLKILGLTGNDLLSFPEEIFSLISLEKLYIGQDQGSKLSSLPEN--IKRLMN 435

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           L+ELY+   +L + P  +  +  L +LD   N L+ +P+      +L EL L DN +  L
Sbjct: 436 LKELYIENNRLEQLPASLGLMPNLEVLDCRHNLLKQLPDAICRTRNLRELLLEDNLLCCL 495

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           P  L  L  +L+ L L  NP+      + ++G +A+ K+LK+
Sbjct: 496 PENLDHL-VNLKVLTLMNNPMVDPPIYVCNQGNEAIWKHLKE 536



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 158/370 (42%), Gaps = 64/370 (17%)

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 119
           +IPS I     L E ++ NN ++ +P  + +L     L LH+N L++ C           
Sbjct: 75  TIPSEILALKELEEVHLENNQIAEIPQGIQQLQNTKVLYLHNNSLQDLC----------- 123

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
                      PE+G +++L  L L+GNPL  + SSL          ++ SRL    +  
Sbjct: 124 -----------PELGALSSLESLDLSGNPL--VISSL----------HVVSRLRTLRELR 160

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMN---LSAIPSEIWEAGEITKLDLSRNSIQELPP 236
              T   L  + T +  +   L L G++   L ++P EI    ++ ++ L +N  +  P 
Sbjct: 161 LYRT--GLTEIPTGICKSLHHLELFGLSENFLESLPEEIVNQTKLREIYLKQNHFEVFPC 218

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           +L    +L+ + L  NK+K  P  I   L  L    + +N L  +P +       L +LD
Sbjct: 219 DLCVLYNLEVIDLDENKLKSIPGDI-GHLVRLQKFYVASNHLMSLP-ESLSQCSKLSVLD 276

Query: 297 LSYN-IASLP-------------------ENPP--FSSLPHLQELYLRRMQLREAPTDIL 334
           L++N I SLP                   E  P    S   L  LYLR   L        
Sbjct: 277 LTHNSIHSLPSSLELLTELTEVGLSGNRLEKVPRLLCSWVSLHLLYLRNTSLHGLRDSFK 336

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           RL  LR LDLSQN ++  P     L +L  L L DN +  LPP + LL  +L+ L L GN
Sbjct: 337 RLINLRFLDLSQNHIEHFPVQICALKNLEILALDDNKVRQLPPSISLLS-NLKILGLTGN 395

Query: 395 PLRSIRRTIL 404
            L S    I 
Sbjct: 396 DLLSFPEEIF 405



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 5/160 (3%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++++ + GN+L  +   L+ SW  L  L      L+G+ ++   L  L  LDL QN I  
Sbjct: 295 LTEVGLSGNRLEKVPR-LLCSWVSLHLLYLRNTSLHGLRDSFKRLINLRFLDLSQNHIEH 353

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RL 116
            P  I    +L    + +N +  LP  +  LS L  L L  N L  +  E   L    +L
Sbjct: 354 FPVQICALKNLEILALDDNKVRQLPPSISLLSNLKILGLTGNDLLSFPEEIFSLISLEKL 413

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            +     + LS LP  I ++  L++L +  N L  L +SL
Sbjct: 414 YIGQDQGSKLSSLPENIKRLMNLKELYIENNRLEQLPASL 453


>gi|328773976|gb|EGF84013.1| hypothetical protein BATDEDRAFT_21667 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 485

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 209/438 (47%), Gaps = 37/438 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET--IGSLSRLIRLDLHQNRILSI 61
           LD+ GN +    +NL  S T++    AS N L   P T  IG L  L RLD+  N+I  +
Sbjct: 61  LDISGNNINNFPHNLPPSITIIN---ASHNKLFISPLTPKIGMLKNLQRLDISHNQIEEL 117

Query: 62  PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRL-SVLD 120
           P  ++    L    + +N L+A+PA + KLS L  L+L  N++ E   +   L L   L+
Sbjct: 118 PIEVADLSRLKTLELHHNMLTAIPAGVLKLSGLEKLNLSFNRITEIDNQFGMLSLLKNLN 177

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           +SNN L  +  EIG +T+L  L L  N +  L   L N  +        +R   N  S  
Sbjct: 178 VSNNLLVNVSAEIGTLTSLVYLNLASNQITMLPDELGNLLSLEEFYIQDNRFLANIPSTM 237

Query: 181 STTKEDLITMATRLSVTSKELSL-----------------EGMNLSAIPSEIWEAGEITK 223
           S      +TM  ++++ + +LS                  +  N++ IP  I +   +  
Sbjct: 238 SN-----LTMLKKVNLGNLKLSTYPSAMATWANMTDFVVRQNANITEIPDTIGKLTGLKT 292

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDW--PDAILTSLSSLSCLKLDNNPLRQV 281
           L+    SI+ L  ++    +L  L L +N++  +  P  I T   S++ L+L NN    +
Sbjct: 293 LESQNCSIRILADDIGQLRNLTRLDLRKNQLSSFAIPYTI-TDWKSITHLQLGNNSFEII 351

Query: 282 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
           P +  +   ++  LD SYN +  LP+      L  L +L L   ++    T+I  L+ L+
Sbjct: 352 PEEICQLYSLID-LDFSYNMLVGLPKQ--IGKLTQLVKLCLNNNKIESLTTEIALLKSLQ 408

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIR 400
            L++  N+L  +P     L+SL +LD+S+N +  LPPEL LLE     L L GN   ++ 
Sbjct: 409 TLEIRFNALSRLPPEIGELSSLLKLDISENQLVDLPPELYLLEGV--TLELKGNHFDAVL 466

Query: 401 RTILDRGTKAVLKYLKDK 418
           +  + +G + ++K L+ K
Sbjct: 467 QQHILKGPEHLMKVLRKK 484



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 83/174 (47%), Gaps = 5/174 (2%)

Query: 1   MSKLDVEGNKLTVLSN-NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 59
           +++LD+  N+L+  +    I  W  +T L    N    +PE I  L  LI LD   N ++
Sbjct: 313 LTRLDLRKNQLSSFAIPYTITDWKSITHLQLGNNSFEIIPEEICQLYSLIDLDFSYNMLV 372

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 118
            +P  I     L +  + NN + +L  E+  L  L TL++  N L     E  +L  L  
Sbjct: 373 GLPKQIGKLTQLVKLCLNNNKIESLTTEIALLKSLQTLEIRFNALSRLPPEIGELSSLLK 432

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL-RTLRSSLVNGPTPALLKYLRSR 171
           LD+S N L  LPPE+  +  +  L L GN     L+  ++ GP   L+K LR +
Sbjct: 433 LDISENQLVDLPPELYLLEGV-TLELKGNHFDAVLQQHILKGP-EHLMKVLRKK 484



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 10/201 (4%)

Query: 217 EAGEITKLDLSRNSIQELPPELSSCA-SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
           +   +++L++S   + E+ P +      L  L   +N++ D P  I+  LS L  L +  
Sbjct: 7   KVDNLSELNISNQQLLEIKPAMLKIHPDLVKLSAHKNQLVDIPSDIVL-LSKLQILDISG 65

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYNIASL-PENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N +   P +     P + I++ S+N   + P  P    L +LQ L +   Q+ E P ++ 
Sbjct: 66  NNINNFPHNL---PPSITIINASHNKLFISPLTPKIGMLKNLQRLDISHNQIEELPIEVA 122

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            L +L+ L+L  N L +IP G   L+ L +L+LS N I+ +  + G+L   L+ L +  N
Sbjct: 123 DLSRLKTLELHHNMLTAIPAGVLKLSGLEKLNLSFNRITEIDNQFGMLS-LLKNLNVSNN 181

Query: 395 PLRSIRRTILDRGTKAVLKYL 415
            L ++   I   GT   L YL
Sbjct: 182 LLVNVSAEI---GTLTSLVYL 199


>gi|260841659|ref|XP_002614028.1| hypothetical protein BRAFLDRAFT_67388 [Branchiostoma floridae]
 gi|229299418|gb|EEN70037.1| hypothetical protein BRAFLDRAFT_67388 [Branchiostoma floridae]
          Length = 1609

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 199/456 (43%), Gaps = 93/456 (20%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 93
           L  +P  +G+L++L RL +  NR L ++P  +    ++    + N  L  LP E+G L++
Sbjct: 329 LRTLPPEVGTLTQLERLKVANNRALQTLPGELWQVTNIKRLDLSNCQLHTLPPEVGTLTQ 388

Query: 94  LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L  LDL  N L+    E   +  +  LDLS+  L  LPP++GK+T L+ L +  NPL+TL
Sbjct: 389 LEWLDLSFNTLQTLPRELGHVTNIKRLDLSHCQLHTLPPQVGKLTHLKWLKVKNNPLQTL 448

Query: 153 RSSLVNGPTPALLK----YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 208
              L    +   L     +L +  PE             +T   RL V +  L       
Sbjct: 449 PGELGQVASIKHLDLSNCWLHTLPPE----------VGTLTQLERLKVANNPLQ------ 492

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI------- 261
             +P E+W+   I +LDLS   +  LPPE+ +   L+ L L  N ++  P  I       
Sbjct: 493 -TLPGELWKVTNIKRLDLSSCWLDTLPPEVGTLTQLEWLSLQGNPLQMLPKQIGQLTAIK 551

Query: 262 ---------------LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY-NIASLP 305
                          + +L  L  L L  NPL+ +P    +++  ++ ++LS+  +  LP
Sbjct: 552 HLNLSFCQLHTLPPEMGTLKQLEWLSLQGNPLQMLPKQ-VENLTHIKWMNLSHCRLQMLP 610

Query: 306 ENPPFSSLPHLQELYL-----------RRM-----------QLREAPTDILRLQQLRILD 343
             P F  L  L+ LYL           R++            L+  P ++  L+ +  L 
Sbjct: 611 --PEFGKLTQLERLYLSCNGELQTLPTRQLTNIKHLDLSNCSLQTLPPEVGELKHVEYLR 668

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL--------------------- 382
           LS N LQ +P   ++LT++  LD+S+  ++ LP E+G +                     
Sbjct: 669 LSSNPLQKLPPEVRHLTNIKHLDMSNCRLNELPIEVGTMTQLRQLDLRYNQLQMLPVEIT 728

Query: 383 -EPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
              +L  L + GNPL      +  +G  AV +Y ++
Sbjct: 729 QHINLYHLDVRGNPLIRPPAEVCSQGMVAVRQYFEE 764



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 191/441 (43%), Gaps = 88/441 (19%)

Query: 11  LTVLSNNLIASWTMLTELIASKNL-----------------------LNGMPETIGSLSR 47
           L  +   +    + L EL  S N+                       +  +P  +  LS+
Sbjct: 190 LVTIGRQIFQQESQLEELDLSGNMQIDLPDELRTLKNIRVLRLNRAGMTTVPPAVLELSQ 249

Query: 48  LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 107
           L +LDL  N+ + +   + G  +L    +    ++++P  + KL+ L  L L SN L+  
Sbjct: 250 LEKLDLSGNKQIKLSDQLLGLTNLKVLRLSRTEMASVPEVVWKLTHLEELHLLSNPLQTL 309

Query: 108 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN-PLRTLRSSLVNGPTPALL 165
            V+  QL R+  LDLSN  L  LPPE+G +T L +L +  N  L+TL   L         
Sbjct: 310 SVKVGQLSRIKRLDLSNCHLRTLPPEVGTLTQLERLKVANNRALQTLPGEL--------- 360

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTS-KELSLEGMNLSAIPSEIWEAGEITKL 224
                                         VT+ K L L    L  +P E+    ++  L
Sbjct: 361 ----------------------------WQVTNIKRLDLSNCQLHTLPPEVGTLTQLEWL 392

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           DLS N++Q LP EL    +++ L LS  ++   P  +   L+ L  LK+ NNPL+ +P +
Sbjct: 393 DLSFNTLQTLPRELGHVTNIKRLDLSHCQLHTLPPQV-GKLTHLKWLKVKNNPLQTLPGE 451

Query: 285 GFKDIPMLQILDLS-YNIASLP--------------ENPPFSSLP-------HLQELYLR 322
               +  ++ LDLS   + +LP               N P  +LP       +++ L L 
Sbjct: 452 -LGQVASIKHLDLSNCWLHTLPPEVGTLTQLERLKVANNPLQTLPGELWKVTNIKRLDLS 510

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
              L   P ++  L QL  L L  N LQ +P+    LT++  L+LS   +  LPPE+G L
Sbjct: 511 SCWLDTLPPEVGTLTQLEWLSLQGNPLQMLPKQIGQLTAIKHLNLSFCQLHTLPPEMGTL 570

Query: 383 EPSLQALRLDGNPLRSIRRTI 403
           +  L+ L L GNPL+ + + +
Sbjct: 571 K-QLEWLSLQGNPLQMLPKQV 590



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 202/459 (44%), Gaps = 91/459 (19%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+ GNK   LS+ L+                         L+ L  L L +  + S
Sbjct: 250 LEKLDLSGNKQIKLSDQLLG------------------------LTNLKVLRLSRTEMAS 285

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RL 116
           +P  +     L E ++ +N L  L  ++G+LS++  LDL +  L+    E   L    RL
Sbjct: 286 VPEVVWKLTHLEELHLLSNPLQTLSVKVGQLSRIKRLDLSNCHLRTLPPEVGTLTQLERL 345

Query: 117 SV---------------------LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL--- 152
            V                     LDLSN  L  LPPE+G +T L  L L+ N L+TL   
Sbjct: 346 KVANNRALQTLPGELWQVTNIKRLDLSNCQLHTLPPEVGTLTQLEWLDLSFNTLQTLPRE 405

Query: 153 --------RSSLVNGPTPAL---------LKYLRSR------LPENEDSEASTTKED--- 186
                   R  L +     L         LK+L+ +      LP      AS    D   
Sbjct: 406 LGHVTNIKRLDLSHCQLHTLPPQVGKLTHLKWLKVKNNPLQTLPGELGQVASIKHLDLSN 465

Query: 187 --LITMATRLSVTSKELSLEGMN--LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
             L T+   +   ++   L+  N  L  +P E+W+   I +LDLS   +  LPPE+ +  
Sbjct: 466 CWLHTLPPEVGTLTQLERLKVANNPLQTLPGELWKVTNIKRLDLSSCWLDTLPPEVGTLT 525

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
            L+ L L  N ++  P  I   L+++  L L    L  +P +    +  L+ L L  N +
Sbjct: 526 QLEWLSLQGNPLQMLPKQI-GQLTAIKHLNLSFCQLHTLPPE-MGTLKQLEWLSLQGNPL 583

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS-LQSIPEGFKNLT 360
             LP+     +L H++ + L   +L+  P +  +L QL  L LS N  LQ++P   + LT
Sbjct: 584 QMLPKQ--VENLTHIKWMNLSHCRLQMLPPEFGKLTQLERLYLSCNGELQTLPT--RQLT 639

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           ++  LDLS+ ++  LPPE+G L+  ++ LRL  NPL+ +
Sbjct: 640 NIKHLDLSNCSLQTLPPEVGELK-HVEYLRLSSNPLQKL 677



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 31/239 (12%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L L    ++ +P  + E  ++ KLDLS N   +L  +L    +L+ L LSR ++   P+ 
Sbjct: 230 LRLNRAGMTTVPPAVLELSQLEKLDLSGNKQIKLSDQLLGLTNLKVLRLSRTEMASVPEV 289

Query: 261 I----------------------LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           +                      +  LS +  L L N  LR +P +    +  L+ L ++
Sbjct: 290 VWKLTHLEELHLLSNPLQTLSVKVGQLSRIKRLDLSNCHLRTLPPE-VGTLTQLERLKVA 348

Query: 299 YNIA--SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
            N A  +LP       + +++ L L   QL   P ++  L QL  LDLS N+LQ++P   
Sbjct: 349 NNRALQTLPGE--LWQVTNIKRLDLSNCQLHTLPPEVGTLTQLEWLDLSFNTLQTLPREL 406

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
            ++T++  LDLS   +  LPP++G L   L+ L++  NPL+++   +   G  A +K+L
Sbjct: 407 GHVTNIKRLDLSHCQLHTLPPQVGKLT-HLKWLKVKNNPLQTLPGEL---GQVASIKHL 461


>gi|426342830|ref|XP_004038035.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Gorilla gorilla gorilla]
          Length = 560

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 183/414 (44%), Gaps = 60/414 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN L  L    I + T L E+   +N     P+ +  L  L  +DL +N+I +IP 
Sbjct: 147 LGLTGNHLKCLPKE-IVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPE 205

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I     L +F+M +N L  LPA L + S+L                      SVLDLS+
Sbjct: 206 EIGHLTGLQKFHMASNNLPVLPASLCQCSQL----------------------SVLDLSH 243

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N L  +P  + ++  + ++ L+GN L  +   L+   T   L YL              T
Sbjct: 244 NLLHSIPKSLAELRKMTEIGLSGNRLEKV-PRLICRWTSLHLLYL------------GNT 290

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
               +  + R  +  + L L   +L   P +I     +  L L  N I +LP EL S + 
Sbjct: 291 GLHRLPGSFRCLINLRFLDLSQNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLSK 350

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 303
           L+ L L+ N+   +P+ +L SL+SL  L +  +        GFK         L+Y    
Sbjct: 351 LKILGLTGNEFLSFPEEVL-SLASLEKLYIGQD-------QGFK---------LTY---- 389

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
           +PE+     L  L+ELY+    L   P  +  +  L +LD   N L+ +P+      +L 
Sbjct: 390 VPEH--IRKLQSLKELYIENNHLEYLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQALK 447

Query: 364 ELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           EL L DN ++ LP  L  L  +L+ L L  NP+    + +   G +A+ KYLK+
Sbjct: 448 ELRLEDNLLTHLPENLDSL-VNLKVLTLMDNPMEEPPKEVCAEGNEAIWKYLKE 500



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 161/357 (45%), Gaps = 41/357 (11%)

Query: 74  FYM--GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 130
           F++   N +L+A+P E+   ++L  + L +NQ++E   E  +L+ + VL L  N+L  L 
Sbjct: 28  FFIDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLC 87

Query: 131 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLIT 189
           P +G +++L  L L+ NP+    SSLV     + L  LR  RL + +       KE  + 
Sbjct: 88  PALGLLSSLESLDLSYNPI--FSSSLV---VVSFLHALRELRLYQTD------LKEIPVV 136

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
           +   L    + L L G +L  +P EI    ++ ++ L RN  +  P EL    +L+ + L
Sbjct: 137 ICKNLH-HLELLGLTGNHLKCLPKEIVNQTKLREIYLKRNQFEVFPQELCVLYTLEIIDL 195

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLP--- 305
             NKI   P+ I   L+ L    + +N L  +P+        L +LDLS+N+  S+P   
Sbjct: 196 DENKIGAIPEEI-GHLTGLQKFHMASNNLPVLPA-SLCQCSQLSVLDLSHNLLHSIPKSL 253

Query: 306 ----------------ENPP--FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
                           E  P        L  LYL    L   P     L  LR LDLSQN
Sbjct: 254 AELRKMTEIGLSGNRLEKVPRLICRWTSLHLLYLGNTGLHRLPGSFRCLINLRFLDLSQN 313

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
            L   P     L +L  L L DN I  LP ELG L   L+ L L GN   S    +L
Sbjct: 314 HLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLS-KLKILGLTGNEFLSFPEEVL 369



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 179/423 (42%), Gaps = 71/423 (16%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL-PAE- 87
           AS   L  +P  I + + L  + L  N+I  IP  I    ++   Y+  N L +L PA  
Sbjct: 32  ASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPALG 91

Query: 88  ----------------------LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSN 123
                                 +  L  L  L L+   LKE  V  C+    L +L L+ 
Sbjct: 92  LLSSLESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVICKNLHHLELLGLTG 151

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N L  LP EI   T LR++ L  N            P    + Y    +  +E+   +  
Sbjct: 152 NHLKCLPKEIVNQTKLREIYLKRNQFEVF-------PQELCVLYTLEIIDLDENKIGAIP 204

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
           +E  I   T L    ++  +   NL  +P+ + +  +++ LDLS N +  +P  L+    
Sbjct: 205 EE--IGHLTGL----QKFHMASNNLPVLPASLCQCSQLSVLDLSHNLLHSIPKSLAELRK 258

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 303
           +  + LS N+++  P  ++   +SL  L L N  L ++P   F+ +  L+ LDLS N   
Sbjct: 259 MTEIGLSGNRLEKVP-RLICRWTSLHLLYLGNTGLHRLPG-SFRCLINLRFLDLSQN--H 314

Query: 304 LPENP-PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE-------- 354
           L   P    +L +L+ L L   ++ + P+++  L +L+IL L+ N   S PE        
Sbjct: 315 LDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLSKLKILGLTGNEFLSFPEEVLSLASL 374

Query: 355 ---------GFK---------NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
                    GFK          L SL EL + +N++  LP  LG + P+L+ L    N L
Sbjct: 375 EKLYIGQDQGFKLTYVPEHIRKLQSLKELYIENNHLEYLPVSLGSM-PNLEVLDCRHNLL 433

Query: 397 RSI 399
           + +
Sbjct: 434 KQL 436


>gi|12853204|dbj|BAB29680.1| unnamed protein product [Mus musculus]
 gi|148703017|gb|EDL34964.1| RIKEN cDNA 4930558O21, isoform CRA_a [Mus musculus]
          Length = 581

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 184/402 (45%), Gaps = 65/402 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I + T L E+   +N     P  +  L  L  +DL +N++ SIP  I     L +FY+ +
Sbjct: 182 IVNQTKLREIYLKQNHFEVFPCDLCVLYNLEVIDLDENKLKSIPGDIGHLVRLQKFYVAS 241

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N L +LP  L + SKL                      SVLDL++NS+  LP  +  +T 
Sbjct: 242 NHLMSLPESLSQCSKL----------------------SVLDLTHNSIHSLPSSLELLTE 279

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L ++ L+GN L  +   L +  +  LL YLR+           T+   L     RL    
Sbjct: 280 LTEVGLSGNRLEKVPRLLCSWVSLHLL-YLRN-----------TSLHGLRDSFKRL---- 323

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
                  +NL               LDLS+N I+  P ++ +  +L+ L L  NK++  P
Sbjct: 324 -------INLRF-------------LDLSQNHIEHFPVQICALKNLEILALDDNKVRQLP 363

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL---DLSYNIASLPENPPFSSLPH 315
            +I + LS+L  L L  N L   P + F  I + ++    D    ++SLPEN     L +
Sbjct: 364 PSI-SLLSNLKILGLTGNDLLSFPEEIFSLISLEKLYIGQDQGSKLSSLPEN--IKRLMN 420

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           L+ELY+   +L + P  +  +  L +LD   N L+ +P+      +L EL L DN +  L
Sbjct: 421 LKELYIENNRLEQLPASLGLMPNLEVLDCRHNLLKQLPDAICRTRNLRELLLEDNLLCCL 480

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           P  L  L  +L+ L L  NP+      + ++G +A+ K+LK+
Sbjct: 481 PENLDHL-VNLKVLTLMNNPMVDPPIYVCNQGNEAIWKHLKE 521



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 158/370 (42%), Gaps = 64/370 (17%)

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 119
           +IPS I     L E ++ NN ++ +P  + +L     L LH+N L++ C           
Sbjct: 60  TIPSEILALKELEEVHLENNQIAEIPQGIQQLQNTKVLYLHNNSLQDLC----------- 108

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
                      PE+G +++L  L L+GNPL  + SSL          ++ SRL    +  
Sbjct: 109 -----------PELGALSSLESLDLSGNPL--VISSL----------HVVSRLRTLRELR 145

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMN---LSAIPSEIWEAGEITKLDLSRNSIQELPP 236
              T   L  + T +  +   L L G++   L ++P EI    ++ ++ L +N  +  P 
Sbjct: 146 LYRT--GLTEIPTGICKSLHHLELFGLSENFLESLPEEIVNQTKLREIYLKQNHFEVFPC 203

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           +L    +L+ + L  NK+K  P  I   L  L    + +N L  +P +       L +LD
Sbjct: 204 DLCVLYNLEVIDLDENKLKSIPGDI-GHLVRLQKFYVASNHLMSLP-ESLSQCSKLSVLD 261

Query: 297 LSYN-IASLP-------------------ENPP--FSSLPHLQELYLRRMQLREAPTDIL 334
           L++N I SLP                   E  P    S   L  LYLR   L        
Sbjct: 262 LTHNSIHSLPSSLELLTELTEVGLSGNRLEKVPRLLCSWVSLHLLYLRNTSLHGLRDSFK 321

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           RL  LR LDLSQN ++  P     L +L  L L DN +  LPP + LL  +L+ L L GN
Sbjct: 322 RLINLRFLDLSQNHIEHFPVQICALKNLEILALDDNKVRQLPPSISLLS-NLKILGLTGN 380

Query: 395 PLRSIRRTIL 404
            L S    I 
Sbjct: 381 DLLSFPEEIF 390



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 5/160 (3%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++++ + GN+L  +   L+ SW  L  L      L+G+ ++   L  L  LDL QN I  
Sbjct: 280 LTEVGLSGNRLEKVPR-LLCSWVSLHLLYLRNTSLHGLRDSFKRLINLRFLDLSQNHIEH 338

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RL 116
            P  I    +L    + +N +  LP  +  LS L  L L  N L  +  E   L    +L
Sbjct: 339 FPVQICALKNLEILALDDNKVRQLPPSISLLSNLKILGLTGNDLLSFPEEIFSLISLEKL 398

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            +     + LS LP  I ++  L++L +  N L  L +SL
Sbjct: 399 YIGQDQGSKLSSLPENIKRLMNLKELYIENNRLEQLPASL 438


>gi|359323789|ref|XP_003640188.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and IQ
           domain-containing protein 4 [Canis lupus familiaris]
          Length = 561

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 177/412 (42%), Gaps = 62/412 (15%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           GN L  L    I + T L E+    N     P  +  L  L  +DL +N++ +IP  I  
Sbjct: 152 GNHLRSLPKE-IVNQTQLREIYLGHNQFAVFPPELCVLCNLEIIDLDENQLTAIPEEIGN 210

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 126
              L +FY+ +N L+ LP  LG  + L  LDL  N+L+       QL  L+ + LS N L
Sbjct: 211 LARLQKFYVADNGLAGLPEALGLCAGLAVLDLSRNRLRSLPRGLAQLAALTEVGLSGNHL 270

Query: 127 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 186
             LP  + + +++  L L    LR LR S                               
Sbjct: 271 ERLPRLVCRWSSVHLLYLRDTGLRALRRSF------------------------------ 300

Query: 187 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
                 R  V  + L L   +L   P+E+     +  L L  N I++LP + SS + L+ 
Sbjct: 301 ------RRLVHLRLLDLSQNHLERGPAELCALRHLQVLALDDNRIRQLPSDFSSLSKLKM 354

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 306
           L L+ N+   +P+ IL SL SL  L +  +                Q + L+Y    +PE
Sbjct: 355 LGLTGNQFPSFPEEIL-SLESLEKLYIGQD----------------QGMKLTY----IPE 393

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
           +   S L  L+ELY+    L   PT +  +  L ILD   N L+ +P       +L EL 
Sbjct: 394 H--ISKLQSLKELYVENNHLEYLPTSLGSMPNLEILDCRHNWLKKLPNSICQAQALKELL 451

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           L DN I+ LP  L  L  +L+ L L  NP+    + +   G++A+  YLK K
Sbjct: 452 LEDNLITCLPENLDNL-VNLKVLTLMDNPMEDPPKEVCIEGSQAIWTYLKIK 502



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 170/401 (42%), Gaps = 50/401 (12%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
           AS   L  +P  I  L  L  +   +N+I  IP  I    +L   Y+  N L  L  ELG
Sbjct: 33  ASSQSLTTVPREITDLEELEEVHXEKNQIEEIPQDIQHLKNLRILYLNKNRLGKLCPELG 92

Query: 90  KLSKLGTLDLHSNQL--KEYCVEACQLRLSVLDLSNNSLSGLP-PEIGKMTTLRKLLLTG 146
           +L  L  LDL  N L      V     RL  L L +  L  +P      +  L  L LTG
Sbjct: 93  RLGSLEGLDLSHNPLLSSSLPVLGGLRRLRELRLYHTHLGEIPNVLCKLLHHLELLGLTG 152

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLE 204
           N LR+L   +VN               + +  E              L V    + + L+
Sbjct: 153 NHLRSLPKEIVN---------------QTQLREIYLGHNQFAVFPPELCVLCNLEIIDLD 197

Query: 205 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 264
              L+AIP EI     + K  ++ N +  LP  L  CA L  L LSRN+++  P   L  
Sbjct: 198 ENQLTAIPEEIGNLARLQKFYVADNGLAGLPEALGLCAGLAVLDLSRNRLRSLPRG-LAQ 256

Query: 265 LSSLSCLKLDNNPLRQVP----------------------SDGFKDIPMLQILDLSYNIA 302
           L++L+ + L  N L ++P                         F+ +  L++LDLS N  
Sbjct: 257 LAALTEVGLSGNHLERLPRLVCRWSSVHLLYLRDTGLRALRRSFRRLVHLRLLDLSQN-- 314

Query: 303 SLPENPP-FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
            L   P    +L HLQ L L   ++R+ P+D   L +L++L L+ N   S PE   +L S
Sbjct: 315 HLERGPAELCALRHLQVLALDDNRIRQLPSDFSSLSKLKMLGLTGNQFPSFPEEILSLES 374

Query: 362 LTELDLSDNN---ISALPPELGLLEPSLQALRLDGNPLRSI 399
           L +L +  +    ++ +P  +  L+ SL+ L ++ N L  +
Sbjct: 375 LEKLYIGQDQGMKLTYIPEHISKLQ-SLKELYVENNHLEYL 414



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 27/220 (12%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI-KDWPDAILTSLS 266
           L+ +P EI +  E+ ++   +N I+E+P ++    +L+ L L++N++ K  P+  L  L 
Sbjct: 38  LTTVPREITDLEELEEVHXEKNQIEEIPQDIQHLKNLRILYLNKNRLGKLCPE--LGRLG 95

Query: 267 SLSCLKLDNNPL----------------RQVPSDGFKDIPMLQILDLSYNIASLPENPPF 310
           SL  L L +NPL                 ++      +IP +    L +           
Sbjct: 96  SLEGLDLSHNPLLSSSLPVLGGLRRLRELRLYHTHLGEIPNVLCKLLHHLELLGLTGNHL 155

Query: 311 SSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
            SLP        L+E+YL   Q    P ++  L  L I+DL +N L +IPE   NL  L 
Sbjct: 156 RSLPKEIVNQTQLREIYLGHNQFAVFPPELCVLCNLEIIDLDENQLTAIPEEIGNLARLQ 215

Query: 364 ELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           +  ++DN ++ LP  LGL    L  L L  N LRS+ R +
Sbjct: 216 KFYVADNGLAGLPEALGLC-AGLAVLDLSRNRLRSLPRGL 254



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 5/122 (4%)

Query: 7   EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 66
           +G KLT +  + I+    L EL    N L  +P ++GS+  L  LD   N +  +P+SI 
Sbjct: 384 QGMKLTYIPEH-ISKLQSLKELYVENNHLEYLPTSLGSMPNLEILDCRHNWLKKLPNSIC 442

Query: 67  GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL----KEYCVEACQLRLSVLDLS 122
              +L E  + +N ++ LP  L  L  L  L L  N +    KE C+E  Q   + L + 
Sbjct: 443 QAQALKELLLEDNLITCLPENLDNLVNLKVLTLMDNPMEDPPKEVCIEGSQAIWTYLKIK 502

Query: 123 NN 124
            N
Sbjct: 503 RN 504


>gi|443690437|gb|ELT92575.1| hypothetical protein CAPTEDRAFT_148907, partial [Capitella teleta]
          Length = 600

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 181/397 (45%), Gaps = 41/397 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D     LT +  +++     L EL+   N +  +P     L++L +L L  N I  +P 
Sbjct: 18  IDKRHCNLTQIPEDILRYVRTLEELLLDANQIRELPRGFFRLAQLRKLTLSDNEIARLPP 77

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    SL E  +  N ++ +P  +     L   D   N L        QLR L+ L L+
Sbjct: 78  DIGNFMSLQELDISRNDITDIPENIKFCRNLQVADFSCNPLSRLPDGFTQLRNLTHLGLN 137

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           + SL+ LPP+IG ++ L  L L  N L+ L SSL      + L  L++          S 
Sbjct: 138 DVSLARLPPDIGSLSNLESLELRENLLKYLPSSL------SFLVKLKTL------DLGSN 185

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
             EDL      L  + +EL L+   LS +P EI     +T++D+S N ++ LP E+S   
Sbjct: 186 VLEDLPETIGSLP-SLEELWLDCNELSELPPEIGNLKRLTQIDVSENKLERLPDEMSGLL 244

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
            L  LILS+N I+  P+ I  +L  LS LK+D N                Q+L L+    
Sbjct: 245 HLTDLILSQNSIEYLPEGI-GNLRKLSILKMDQN----------------QLLHLT---- 283

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
                P   +   +QEL L    L + PT I R++ L   ++ +N L  IP+     + L
Sbjct: 284 -----PAIGNCIAMQELILTENLLSDVPTSIGRMKLLANFNVDRNRLTEIPKEIGQCSKL 338

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
             L L DN +  LP E+G L+  L  L + GN L+ +
Sbjct: 339 GVLSLRDNRVLYLPSEIGNLK-ELHVLDVSGNRLQHL 374



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 117/246 (47%), Gaps = 15/246 (6%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P  IGSLS L  L+L +N +  +PSS+S    L    +G+N L  LP  +G L  L  L
Sbjct: 144 LPPDIGSLSNLESLELRENLLKYLPSSLSFLVKLKTLDLGSNVLEDLPETIGSLPSLEEL 203

Query: 98  DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            L  N+L E   E   L RL+ +D+S N L  LP E+  +  L  L+L+ N +  L   +
Sbjct: 204 WLDCNELSELPPEIGNLKRLTQIDVSENKLERLPDEMSGLLHLTDLILSQNSIEYLPEGI 263

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
            N    ++LK  +++L               +T A    +  +EL L    LS +P+ I 
Sbjct: 264 GNLRKLSILKMDQNQLLH-------------LTPAIGNCIAMQELILTENLLSDVPTSIG 310

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
               +   ++ RN + E+P E+  C+ L  L L  N++   P  I  +L  L  L +  N
Sbjct: 311 RMKLLANFNVDRNRLTEIPKEIGQCSKLGVLSLRDNRVLYLPSEI-GNLKELHVLDVSGN 369

Query: 277 PLRQVP 282
            L+ +P
Sbjct: 370 RLQHLP 375



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 121/261 (46%), Gaps = 38/261 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I S + L  L   +NLL  +P ++  L +L  LDL  N +  +P +I    SL E ++  
Sbjct: 148 IGSLSNLESLELRENLLKYLPSSLSFLVKLKTLDLGSNVLEDLPETIGSLPSLEELWLDC 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLK----------------------EYCVEACQ--L 114
           N LS LP E+G L +L  +D+  N+L+                      EY  E      
Sbjct: 208 NELSELPPEIGNLKRLTQIDVSENKLERLPDEMSGLLHLTDLILSQNSIEYLPEGIGNLR 267

Query: 115 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           +LS+L +  N L  L P IG    +++L+LT N L  + +S+      A     R+RL E
Sbjct: 268 KLSILKMDQNQLLHLTPAIGNCIAMQELILTENLLSDVPTSIGRMKLLANFNVDRNRLTE 327

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
                    KE  I   ++L V    LSL    +  +PSEI    E+  LD+S N +Q L
Sbjct: 328 -------IPKE--IGQCSKLGV----LSLRDNRVLYLPSEIGNLKELHVLDVSGNRLQHL 374

Query: 235 PPELSSCASLQTLILSRNKIK 255
           P  + SC +L+ L LS N+ +
Sbjct: 375 PITMGSC-NLKALWLSENQAQ 394



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 87/153 (56%), Gaps = 2/153 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++++DV  NKL  L + + +    LT+LI S+N +  +PE IG+L +L  L + QN++L 
Sbjct: 223 LTQIDVSENKLERLPDEM-SGLLHLTDLILSQNSIEYLPEGIGNLRKLSILKMDQNQLLH 281

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +  +I  C ++ E  +  N LS +P  +G++  L   ++  N+L E   E  Q  +L VL
Sbjct: 282 LTPAIGNCIAMQELILTENLLSDVPTSIGRMKLLANFNVDRNRLTEIPKEIGQCSKLGVL 341

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
            L +N +  LP EIG +  L  L ++GN L+ L
Sbjct: 342 SLRDNRVLYLPSEIGNLKELHVLDVSGNRLQHL 374


>gi|348578841|ref|XP_003475190.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat protein
           SHOC-2-like [Cavia porcellus]
          Length = 584

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 188/407 (46%), Gaps = 43/407 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E   L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGDLCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-L 238
                         LS  S+ L L    LSAIP  + +   + +L+L  N+I  LP   L
Sbjct: 283 --------------LSSLSR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 445

Query: 358 NLTSLTELDLSDNNISALPPELGLLEP-SLQALRLDGNPLRSIRRTI 403
           NL  L ELDL +N     P E+  L+      L L  N L ++ R I
Sbjct: 446 NLRKLRELDLEENXFDHCPNEIAYLKDLQXNKLVLTNNQLTTLPRGI 492



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGDLCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPRSL 303



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 187/425 (44%), Gaps = 67/425 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S L +  NK+  L    I     L  L  + N L  +P+ IG+ +++  LDL  N +L 
Sbjct: 217 LSMLSIRENKIKQLPAE-IGDLCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLD 275

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P +I    SL+   +  N LSA+P  L K S                       L  L+
Sbjct: 276 LPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSA----------------------LEELN 313

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL----VNGPTPALLKYLRSRLPENE 176
           L NN++S LP  +  +++L KL    N L   R+      V GP+     Y       + 
Sbjct: 314 LENNNISTLPESL--LSSLVKL----NSLTLARNCFQLYPVGGPSQFSTIY-------SL 360

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
           + E +   +    + +R  V SK L+++   L+++P +      + +L+L+ N + ++P 
Sbjct: 361 NMEHNRINKIPFGIFSRAKVLSK-LNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           ++S   SL+ LILS N +K  P   L +L  L  L L+ N     P++      +  + D
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHG-LGNLRKLRELDLEENXFDHCPNE------IAYLKD 472

Query: 297 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
           L  N                 +L L   QL   P  I  L  L  L L +N L  +PE  
Sbjct: 473 LQXN-----------------KLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEI 515

Query: 357 KNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
             L +L EL L+DN N+ +LP EL L    L  + ++  PL  +   I+  G   ++++L
Sbjct: 516 GTLENLEELYLNDNPNLHSLPFELALCS-KLSIMSIENCPLSHLPPQIVAGGPSFIIQFL 574

Query: 416 KDKIP 420
           K + P
Sbjct: 575 KMQGP 579


>gi|55733633|emb|CAH93493.1| hypothetical protein [Pongo abelii]
          Length = 582

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 193/404 (47%), Gaps = 20/404 (4%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +LD+    + +L ++ I   T LTEL    N L  +P  +G L  L+ L L +N + S+P
Sbjct: 104 RLDLSKRSIHILPSS-IKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
            S+     L    + +N L  +P+ + +L  L TL L  N++     +   L +LS+L +
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSI 222

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
             N +  LP EIG++  L  L +  N L  L   + N      L    + L         
Sbjct: 223 RENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNEL--------- 273

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-LSS 240
               DL      LS  S+ L L    LSAIP  + +   + +L+L  N+I  LP   LSS
Sbjct: 274 ---LDLPDTIGNLSSLSR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSS 329

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
              L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++  N
Sbjct: 330 LVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDN 389

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            + SLP +  F +   + EL L   Q  + P D+  L  L +L LS N L+ +P G  NL
Sbjct: 390 QLTSLPLD--FGTWTSMVELNLATNQPTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNL 447

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 448 RELRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 198/432 (45%), Gaps = 65/432 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N  + + L    +RL     S 
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSL 303

Query: 180 A---------------STTKEDLITMATRLSV--------------------TSKELSLE 204
           A               ST  E L++   +L+                     T   L++E
Sbjct: 304 AKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNME 363

Query: 205 GMNLSAIPSEIWEAGEI-TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
              ++ IP  I+   ++ +KL++  N +  LP +  +  S+  L L+ N+    P+ + +
Sbjct: 364 HNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQPTKIPEDV-S 422

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            L SL  L L NN L+++P                             +L  L+EL L  
Sbjct: 423 GLVSLEVLILSNNLLKKLPHG-------------------------LGNLRELRELDLEE 457

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            +L   P +I  L+ L+ L L+ N L ++P G  +LT+LT L L +N ++ LP E+G LE
Sbjct: 458 NKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLE 517

Query: 384 PSLQALRLDGNP 395
            +L+ L L+ NP
Sbjct: 518 -NLEELYLNDNP 528



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPRSL 303



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 152/315 (48%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L +L   L  G   ++++     L  N+ ++
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL--PLDFGTWTSMVEL---NLATNQPTK 416

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                  L+++          L L    L  +P  +    E+ +LDL  N ++ LP E++
Sbjct: 417 IPEDVSGLVSLEV--------LILSNNLLKKLPHGLGNLRELRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP   SLP
Sbjct: 524 ----LNDNPNLHSLP 534


>gi|324509731|gb|ADY44080.1| Protein lap1, partial [Ascaris suum]
          Length = 634

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 175/365 (47%), Gaps = 21/365 (5%)

Query: 21  SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 80
           S + L EL    N +  +PE +    +L  L L QN+IL +P +I    +L E ++ +N 
Sbjct: 35  SASCLEELYLDCNQICEIPEGLCRCKKLRSLSLGQNKILRVPPAIGSLIALEELHLEDNE 94

Query: 81  LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL 139
           LS LP EL K S L  LDL  N L        +L  L+ L L   SL+ LPP+I ++  L
Sbjct: 95  LSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQNL 154

Query: 140 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTS 198
           R L +  N LR L       P    LK+LR   L  NE S        L  +        
Sbjct: 155 RSLDVRENQLRIL------PPAICQLKHLRELDLGRNELSHLPLNMGSLEVL-------- 200

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L ++   LSA+P  +   G +  LD+S+N +  LP E+     L  L ++ N+I   P
Sbjct: 201 EDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALP 260

Query: 259 DAILTSLSSLSCLKLDNNPLRQ-VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           ++I   L +L  LK D+N L + VP+ G +   +L++   +  + +LP       L  L 
Sbjct: 261 NSI-GRLKNLVTLKADSNALTELVPTIG-ECSSLLELYLFNNQLTTLPAT--IGGLKELS 316

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +   QL E P+ I    +L IL L  N L+ +P     L +L  LDL DN ++ LP 
Sbjct: 317 VLSIDENQLEEIPSAIGGCSKLSILTLRGNRLRELPLEVGRLANLRVLDLCDNILAFLPF 376

Query: 378 ELGLL 382
            + +L
Sbjct: 377 TINVL 381



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 158/362 (43%), Gaps = 44/362 (12%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I S   L EL    N L+ +PE +   S L  LDL  N +  +P  ++   SL   Y+  
Sbjct: 79  IGSLIALEELHLEDNELSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTHLYLFE 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LP ++ +L  L +LD+  NQL+      CQL+ L  LDL  N LS LP  +G + 
Sbjct: 139 TSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLRELDLGRNELSHLPLNMGSLE 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L +  N L  +  SL +        +LR+            ++ DL  +   +   
Sbjct: 199 VLEDLYVDHNVLSAVPDSLTS------CGHLRT---------LDVSQNDLTALPKEIGDL 243

Query: 198 SK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
            +  ELS+    ++A+P+ I     +  L    N++ EL P +  C+SL  L L  N++ 
Sbjct: 244 EQLCELSIAENRIAALPNSIGRLKNLVTLKADSNALTELVPTIGECSSLLELYLFNNQLT 303

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 315
             P A +  L  LS L +D N L ++PS                                
Sbjct: 304 TLP-ATIGGLKELSVLSIDENQLEEIPS-------------------------AIGGCSK 337

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           L  L LR  +LRE P ++ RL  LR+LDL  N L  +P     L +L  L LS +  S L
Sbjct: 338 LSILTLRGNRLRELPLEVGRLANLRVLDLCDNILAFLPFTINVLFNLRALWLSVDQTSPL 397

Query: 376 PP 377
            P
Sbjct: 398 VP 399



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/214 (36%), Positives = 111/214 (51%), Gaps = 11/214 (5%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWE-AGEITKLDLSRNSIQELPPELSSCASLQT 246
            T + R+ V  K       NL  +P+E+   A  + +L L  N I E+P  L  C  L++
Sbjct: 9   FTCSGRVDVIEKR----QCNLHELPAEVERSASCLEELYLDCNQICEIPEGLCRCKKLRS 64

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLP 305
           L L +NKI   P AI  SL +L  L L++N L  +P +  K    L+ILDL  N+   LP
Sbjct: 65  LSLGQNKILRVPPAI-GSLIALEELHLEDNELSDLPEELVK-CSNLKILDLRLNLLTRLP 122

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
           +    + L  L  LYL    L + P DI +LQ LR LD+ +N L+ +P     L  L EL
Sbjct: 123 D--VVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLREL 180

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           DL  N +S LP  +G LE  L+ L +D N L ++
Sbjct: 181 DLGRNELSHLPLNMGSLE-VLEDLYVDHNVLSAV 213



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 156/345 (45%), Gaps = 29/345 (8%)

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQLR-LSV 118
           +P + SG   + E    N  L  LPAE+ +  S L  L L  NQ+ E     C+ + L  
Sbjct: 7   VPFTCSGRVDVIEKRQCN--LHELPAEVERSASCLEELYLDCNQICEIPEGLCRCKKLRS 64

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY---LRSRLPEN 175
           L L  N +  +PP IG +  L +L L  N L  L   LV      +L     L +RLP+ 
Sbjct: 65  LSLGQNKILRVPPAIGSLIALEELHLEDNELSDLPEELVKCSNLKILDLRLNLLTRLPD- 123

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                         + TRLS  +  L L   +L+ +P +I +   +  LD+  N ++ LP
Sbjct: 124 --------------VVTRLSSLT-HLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILP 168

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
           P +     L+ L L RN++   P   + SL  L  L +D+N L  VP D       L+ L
Sbjct: 169 PAICQLKHLRELDLGRNELSHLP-LNMGSLEVLEDLYVDHNVLSAVP-DSLTSCGHLRTL 226

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           D+S N + +LP+      L  L EL +   ++   P  I RL+ L  L    N+L  +  
Sbjct: 227 DVSQNDLTALPKE--IGDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADSNALTELVP 284

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
                +SL EL L +N ++ LP  +G L+  L  L +D N L  I
Sbjct: 285 TIGECSSLLELYLFNNQLTTLPATIGGLK-ELSVLSIDENQLEEI 328



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 4/151 (2%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N LT L    I     L EL  ++N +  +P +IG L  L+ L    N +  +  
Sbjct: 226 LDVSQNDLTALPKE-IGDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADSNALTELVP 284

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDL 121
           +I  C SL E Y+ NN L+ LPA +G L +L  L +  NQL+E    +  C  +LS+L L
Sbjct: 285 TIGECSSLLELYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAIGGCS-KLSILTL 343

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
             N L  LP E+G++  LR L L  N L  L
Sbjct: 344 RGNRLRELPLEVGRLANLRVLDLCDNILAFL 374



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 137/295 (46%), Gaps = 22/295 (7%)

Query: 112 CQLRLSVLDLSNNSLSGLPPEIGK-MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 170
           C  R+ V++    +L  LP E+ +  + L +L L  N +  +   L         K LRS
Sbjct: 11  CSGRVDVIEKRQCNLHELPAEVERSASCLEELYLDCNQICEIPEGLCR------CKKLRS 64

Query: 171 -RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
             L +N+          LI +        +EL LE   LS +P E+ +   +  LDL  N
Sbjct: 65  LSLGQNKILRVPPAIGSLIAL--------EELHLEDNELSDLPEELVKCSNLKILDLRLN 116

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP  ++  +SL  L L    +   P  I   L +L  L +  N LR +P      +
Sbjct: 117 LLTRLPDVVTRLSSLTHLYLFETSLTQLPPDI-DQLQNLRSLDVRENQLRILPP-AICQL 174

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L+ LDL  N ++ LP N    SL  L++LY+    L   P  +     LR LD+SQN 
Sbjct: 175 KHLRELDLGRNELSHLPLN--MGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQND 232

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L ++P+   +L  L EL +++N I+ALP  +G L+ +L  L+ D N L  +  TI
Sbjct: 233 LTALPKEIGDLEQLCELSIAENRIAALPNSIGRLK-NLVTLKADSNALTELVPTI 286



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 130/281 (46%), Gaps = 18/281 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N LT L + ++   + LT L   +  L  +P  I  L  L  LD+ +N++  +P 
Sbjct: 111 LDLRLNLLTRLPD-VVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPP 169

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDL 121
           +I     L E  +G N LS LP  +G L  L  L +  N L      + +C   L  LD+
Sbjct: 170 AICQLKHLRELDLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAVPDSLTSCG-HLRTLDV 228

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
           S N L+ LP EIG +  L +L +  N +  L         P  +  L++ +    DS A 
Sbjct: 229 SQNDLTALPKEIGDLEQLCELSIAENRIAAL---------PNSIGRLKNLVTLKADSNAL 279

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
           T     I   + L     EL L    L+ +P+ I    E++ L +  N ++E+P  +  C
Sbjct: 280 TELVPTIGECSSL----LELYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAIGGC 335

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           + L  L L  N++++ P  +   L++L  L L +N L  +P
Sbjct: 336 SKLSILTLRGNRLRELPLEV-GRLANLRVLDLCDNILAFLP 375


>gi|24216019|ref|NP_713500.1| hypothetical protein LA_3320 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075100|ref|YP_005989419.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24197247|gb|AAN50518.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458891|gb|AER03436.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 377

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 163/350 (46%), Gaps = 43/350 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL +  + ++P  I    +L   Y+  N L+ LP E+ +L  L  L L SN+L     E
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE 110

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L VLDL +N L+ LP EI ++  L+ L L  N L TL   +             
Sbjct: 111 IEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDI------------- 157

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                          E L  +        K L L    L+ +P+EI +   +  L LS N
Sbjct: 158 ---------------EQLQNL--------KSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
                P E+    +L+ L L+ N+I   P+ I   L  L  L L +N L  +P +  + +
Sbjct: 195 QFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKKLQYLYLSDNQLITLPKE-IEQL 252

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ LDLSYN +  LP+      L +LQ L LR  QL+  P +I +L+ L+ L L+ N 
Sbjct: 253 KNLQTLDLSYNQLTILPK--EVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLNNNQ 310

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L  +P+    L +L  L L  N ++ LP E+  L+ +LQ L L+ N   S
Sbjct: 311 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK-NLQTLYLNNNQFSS 359



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 164/345 (47%), Gaps = 40/345 (11%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+  L  +P  IG L  L RL LH N++  +P  I    +L   Y+ +N L+ LP E+ +
Sbjct: 54  SRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQ 113

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL SNQL     E  QL+ L +L L +N L+ L  +I ++  L+ L L+ N L
Sbjct: 114 LKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQL 173

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
            TL + +        LK L+S L  +E+  A+  KE  I     L V    L L    ++
Sbjct: 174 TTLPNEI------EQLKNLKS-LYLSENQFATFPKE--IGQLQNLKV----LFLNNNQIT 220

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P+EI +  ++  L LS N +  LP E+    +LQTL LS N++   P  +   L +L 
Sbjct: 221 ILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEV-GQLENLQ 279

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 329
            L L NN L+ +P +                            L +LQ L+L   QL   
Sbjct: 280 TLDLRNNQLKTLPKE-------------------------IEQLKNLQTLFLNNNQLTIL 314

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           P +I +L+ L  L L  N L ++P   + L +L  L L++N  S+
Sbjct: 315 PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 359



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 138/291 (47%), Gaps = 42/291 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS   L  LP EIGK+  L++L L  N L  L   +       LL YLRS   
Sbjct: 46  LEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL-YLRSN-- 102

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                             L+ +P+EI +   +  LDL  N +  
Sbjct: 103 ---------------------------------RLTTLPNEIEQLKNLQVLDLGSNQLTI 129

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQ L L  N++      I   L +L  L L NN L  +P++  + +  L+
Sbjct: 130 LPQEIEQLKNLQLLYLHSNRLTTLSKDI-EQLQNLKSLDLSNNQLTTLPNE-IEQLKNLK 187

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L LS N  A+ P+      L +L+ L+L   Q+   P +I +L++L+ L LS N L ++
Sbjct: 188 SLYLSENQFATFPK--EIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITL 245

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P+  + L +L  LDLS N ++ LP E+G LE +LQ L L  N L+++ + I
Sbjct: 246 PKEIEQLKNLQTLDLSYNQLTILPKEVGQLE-NLQTLDLRNNQLKTLPKEI 295



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 133/301 (44%), Gaps = 40/301 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L +  N+LT L N  I     L  L    N L  +P+ I  L  L  L LH NR+ ++  
Sbjct: 97  LYLRSNRLTTLPNE-IEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSK 155

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    + NN L+ LP E+ +L  L +L L  NQ   +  E  QL+ L VL L+
Sbjct: 156 DIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLN 215

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN ++ LP EI K+  L+ L L+ N L TL   +                          
Sbjct: 216 NNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI-------------------------- 249

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
             E L  + T        L L    L+ +P E+ +   +  LDL  N ++ LP E+    
Sbjct: 250 --EQLKNLQT--------LDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLK 299

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           +LQTL L+ N++   P  I   L +L  L L  N L  +P++  + +  LQ L L+ N  
Sbjct: 300 NLQTLFLNNNQLTILPQEI-GKLKNLLWLSLVYNQLTTLPNE-IEQLKNLQTLYLNNNQF 357

Query: 303 S 303
           S
Sbjct: 358 S 358



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 83/176 (47%), Gaps = 25/176 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  
Sbjct: 163 LKSLDLSNNQLTTLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI 221

Query: 61  IPSSISGCCSLAEFYMGNNAL-----------------------SALPAELGKLSKLGTL 97
           +P+ I+    L   Y+ +N L                       + LP E+G+L  L TL
Sbjct: 222 LPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTL 281

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           DL +NQLK    E  QL+ L  L L+NN L+ LP EIGK+  L  L L  N L TL
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLNNNQLTILPQEIGKLKNLLWLSLVYNQLTTL 337



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L  L    I     L  L  + N L  +P+ IG L  L+ L L  N++ +
Sbjct: 278 LQTLDLRNNQLKTLPKE-IEQLKNLQTLFLNNNQLTILPQEIGKLKNLLWLSLVYNQLTT 336

Query: 61  IPSSISGCCSLAEFYMGNNALSA 83
           +P+ I    +L   Y+ NN  S+
Sbjct: 337 LPNEIEQLKNLQTLYLNNNQFSS 359


>gi|12860109|dbj|BAB31849.1| unnamed protein product [Mus musculus]
          Length = 590

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 184/402 (45%), Gaps = 65/402 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I + T L E+   +N     P  +  L  L  +DL +N++ SIP  I     L +FY+ +
Sbjct: 197 IVNQTKLREIYLKQNHFEVFPCDLCVLYNLEVIDLDENKLKSIPGDIGHLVRLQKFYVAS 256

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N L +LP  L + SKL                      SVLDL++NS+  LP  +  +T 
Sbjct: 257 NHLMSLPESLSQCSKL----------------------SVLDLTHNSIHSLPSSLELLTE 294

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L ++ L+GN L  +   L +  +  LL YLR+           T+   L     RL    
Sbjct: 295 LTEVGLSGNRLEKVPRLLCSWVSLHLL-YLRN-----------TSLHGLRDSFKRL---- 338

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
                  +NL               LDLS+N I+  P ++ +  +L+ L L  NK++  P
Sbjct: 339 -------INLRF-------------LDLSQNHIEHFPVQICALKNLEILALDDNKVRQLP 378

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL---DLSYNIASLPENPPFSSLPH 315
            +I + LS+L  L L  N L   P + F  I + ++    D    ++SLPEN     L +
Sbjct: 379 PSI-SLLSNLKILGLTGNDLLSFPEEIFSLISLEKLYIGQDQGSKLSSLPEN--IKRLMN 435

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           L+ELY+   +L + P  +  +  L +LD   N L+ +P+      +L EL L DN +  L
Sbjct: 436 LKELYIENNRLEQLPASLGLMPNLEVLDCRHNLLKQLPDAICRTRNLRELLLEDNLLCCL 495

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           P  L  L  +L+ L L  NP+      + ++G +A+ K+LK+
Sbjct: 496 PENLDHL-VNLKVLTLMNNPMVDPPIYVCNQGNEAIWKHLKE 536



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 158/370 (42%), Gaps = 64/370 (17%)

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 119
           +IPS I     L E ++ NN ++ +P  + +L     L LH+N L++ C           
Sbjct: 75  TIPSEILALKELEEVHLENNQIAEIPQGIQQLQNTKVLYLHNNSLQDLC----------- 123

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
                      PE+G +++L  L L+GNPL  + SSL          ++ SRL    +  
Sbjct: 124 -----------PELGALSSLESLDLSGNPL--VISSL----------HVVSRLRTLRELR 160

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMN---LSAIPSEIWEAGEITKLDLSRNSIQELPP 236
              T   L  + T +  +   L L G++   L ++P EI    ++ ++ L +N  +  P 
Sbjct: 161 LYRT--GLTEIPTGICKSLHHLELFGLSENFLESLPEEIVNQTKLREIYLKQNHFEVFPC 218

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           +L    +L+ + L  NK+K  P  I   L  L    + +N L  +P +       L +LD
Sbjct: 219 DLCVLYNLEVIDLDENKLKSIPGDI-GHLVRLQKFYVASNHLMSLP-ESLSQCSKLSVLD 276

Query: 297 LSYN-IASLP-------------------ENPP--FSSLPHLQELYLRRMQLREAPTDIL 334
           L++N I SLP                   E  P    S   L  LYLR   L        
Sbjct: 277 LTHNSIHSLPSSLELLTELTEVGLSGNRLEKVPRLLCSWVSLHLLYLRNTSLHGLRDSFK 336

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           RL  LR LDLSQN ++  P     L +L  L L DN +  LPP + LL  +L+ L L GN
Sbjct: 337 RLINLRFLDLSQNHIEHFPVQICALKNLEILALDDNKVRQLPPSISLLS-NLKILGLTGN 395

Query: 395 PLRSIRRTIL 404
            L S    I 
Sbjct: 396 DLLSFPEEIF 405



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 5/160 (3%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++++ + GN+L  +   L+ SW  L  L      L+G+ ++   L  L  LDL QN I  
Sbjct: 295 LTEVGLSGNRLEKVPR-LLCSWVSLHLLYLRNTSLHGLRDSFKRLINLRFLDLSQNHIEH 353

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RL 116
            P  I    +L    + +N +  LP  +  LS L  L L  N L  +  E   L    +L
Sbjct: 354 FPVQICALKNLEILALDDNKVRQLPPSISLLSNLKILGLTGNDLLSFPEEIFSLISLEKL 413

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            +     + LS LP  I ++  L++L +  N L  L +SL
Sbjct: 414 YIGQDQGSKLSSLPENIKRLMNLKELYIENNRLEQLPASL 453


>gi|89271872|emb|CAJ81921.1| erbb2 interacting protein [Xenopus (Silurana) tropicalis]
          Length = 504

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 188/405 (46%), Gaps = 72/405 (17%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTI 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKTM-----NRLTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  +    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEMVEDGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C SLQ L+LS N I+  P++I  +L  L+ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 GCESLQDLLLSSNAIQQLPESI-GALKKLTTLKVDENQLMYLP-DSIGGLTAIEDLDCSF 308

Query: 300 N-IASLPENPPFSSLPHLQE--------------------------LYLRRMQLREAPTD 332
           N I +LP     SS+ HL +                          L+L   +L   P +
Sbjct: 309 NEIEALP-----SSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVLFLHSNKLESLPEE 363

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +  +Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 364 MGDMQKLKVINLSDNRLRNLPFSFTRLQQLTAMWLSDNQSKPLIP 408



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 20/246 (8%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R LL+   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRNLLVRLVPCRCLRGE---EETVTSLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTILPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLP 314
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P  F  L 
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLDFLPANFGRLT 161

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
            LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N ++ 
Sbjct: 162 KLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTY 221

Query: 375 LPPELG 380
           +P  LG
Sbjct: 222 IPGFLG 227



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 146/310 (47%), Gaps = 28/310 (9%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTILPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF  ++  L  LD+S N   + E+   S 
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDGNKLTYIP--GFLGNLKQLTYLDVSKNNIEMVEDG-ISG 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
              LQ+L L    +++ P  I  L++L  L + +N L  +P+    LT++ +LD S N I
Sbjct: 252 CESLQDLLLSSNAIQQLPESIGALKKLTTLKVDENQLMYLPDSIGGLTAIEDLDCSFNEI 311

Query: 373 SALPPELGLL 382
            ALP  +G L
Sbjct: 312 EALPSSIGHL 321



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 40/257 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T +   ++   + L E     N L  +P  +G+L +L  LD+ +N I  
Sbjct: 186 LERLDLGSNEFTEVPE-VLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEM 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-- 118
           +   ISGC SL +  + +NA+  LP  +G L KL TL +  NQL  Y  ++     ++  
Sbjct: 245 VEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDENQLM-YLPDSIGGLTAIED 303

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LD S N +  LP  IG +  +R      N L                    ++LP     
Sbjct: 304 LDCSFNEIEALPSSIGHLIQIRTFAADHNFL--------------------TQLP----P 339

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E  T K            ++  L L    L ++P E+ +  ++  ++LS N ++ LP   
Sbjct: 340 EIGTWK------------SATVLFLHSNKLESLPEEMGDMQKLKVINLSDNRLRNLPFSF 387

Query: 239 SSCASLQTLILSRNKIK 255
           +    L  + LS N+ K
Sbjct: 388 TRLQQLTAMWLSDNQSK 404


>gi|242006348|ref|XP_002424013.1| leucine-rich repeat protein SHOC-2, putative [Pediculus humanus
           corporis]
 gi|212507305|gb|EEB11275.1| leucine-rich repeat protein SHOC-2, putative [Pediculus humanus
           corporis]
          Length = 608

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 138/430 (32%), Positives = 201/430 (46%), Gaps = 26/430 (6%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N LT L  +L+ S   L  L    N LN +PE +  L+ L  L L  NRI  +   I   
Sbjct: 179 NSLTSLPESLV-SLKSLKVLDLRHNKLNEIPEVVYKLTTLTTLFLRFNRIRVVDDDIRNL 237

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLS 127
            +L    +  N +  LP  +G L  L T D+  NQL+   +E  Q ++LS LDL +N L 
Sbjct: 238 SNLTMLSLRENKIKELPPGIGCLINLTTFDVSHNQLEHLPIEIGQCVQLSTLDLQHNELL 297

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPEN-----EDSE 179
            +P  IG +  L +L L  N L T+  SL N              S LPE       D  
Sbjct: 298 DIPETIGNLQLLTRLGLRYNRLVTVPKSLCNCSRMDEFNVEGNSISNLPEGLLASLSDLT 357

Query: 180 ASTTKEDLITM------ATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQ 232
           A T   + +T       A   +V S  ++LE   +  IP  I+  A  + KL++  N + 
Sbjct: 358 AITISRNNMTSYPSGGPAQFTNVHS--INLEHNLIDKIPYGIFTRAKNLAKLNMKENQLT 415

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            LP ++ +  ++  L L+ NK+   P+ I   L SL  L L NN L+++P+ G  ++  L
Sbjct: 416 SLPLDIGTWTNMVELNLATNKLTKIPEDI-QCLESLEVLILSNNMLKRIPA-GMGNLRKL 473

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           +ILDL  N I  LP    F  L  L +L +   Q+   P  I  L  L  L +  N+L S
Sbjct: 474 RILDLEENRIEVLPNEIGF--LRDLTKLIIHSNQISVLPRAIGHLSSLVYLSVGDNNLTS 531

Query: 352 IPEGFKNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKA 410
           +PE    L  L  L ++DN N+  LP EL L + +L  + ++  PL  I   I+  G   
Sbjct: 532 LPEEIGTLEKLESLYVNDNLNLHHLPFELALCK-NLHIMSIENCPLSQIPAEIVQGGPSL 590

Query: 411 VLKYLKDKIP 420
           V+ YLK + P
Sbjct: 591 VIHYLKMQGP 600



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 181/401 (45%), Gaps = 40/401 (9%)

Query: 50  RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
           RLDL ++ I  +PSS+     L EFY+  N L +LP+E+G L  L TL L  N L     
Sbjct: 127 RLDLSKSSITQLPSSVRDLTHLEEFYLYGNKLYSLPSEIGCLVNLQTLALSENSLTSLPE 186

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
               L+ L VLDL +N L+ +P  + K+TTL  L L  N +R +   + N     +L   
Sbjct: 187 SLVSLKSLKVLDLRHNKLNEIPEVVYKLTTLTTLFLRFNRIRVVDDDIRNLSNLTMLSLR 246

Query: 169 RSRLPEN----------EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 218
            +++ E              + S  + + + +     V    L L+   L  IP  I   
Sbjct: 247 ENKIKELPPGIGCLINLTTFDVSHNQLEHLPIEIGQCVQLSTLDLQHNELLDIPETIGNL 306

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
             +T+L L  N +  +P  L +C+ +    +  N I + P+ +L SLS L+ + +  N +
Sbjct: 307 QLLTRLGLRYNRLVTVPKSLCNCSRMDEFNVEGNSISNLPEGLLASLSDLTAITISRNNM 366

Query: 279 RQVPSDGFKDIPMLQILDLSYNIA-----------------SLPENPPFSSLP------- 314
              PS G      +  ++L +N+                  ++ EN   +SLP       
Sbjct: 367 TSYPSGGPAQFTNVHSINLEHNLIDKIPYGIFTRAKNLAKLNMKEN-QLTSLPLDIGTWT 425

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           ++ EL L   +L + P DI  L+ L +L LS N L+ IP G  NL  L  LDL +N I  
Sbjct: 426 NMVELNLATNKLTKIPEDIQCLESLEVLILSNNMLKRIPAGMGNLRKLRILDLEENRIEV 485

Query: 375 LPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           LP E+G L   L  L +  N +  + R I   G  + L YL
Sbjct: 486 LPNEIGFLR-DLTKLIIHSNQISVLPRAI---GHLSSLVYL 522



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 13/220 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  +++E N +  +   +      L +L   +N L  +P  IG+ + ++ L+L  N++  
Sbjct: 380 VHSINLEHNLIDKIPYGIFTRAKNLAKLNMKENQLTSLPLDIGTWTNMVELNLATNKLTK 439

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           IP  I    SL    + NN L  +PA +G L KL  LDL  N+++    E   LR L+ L
Sbjct: 440 IPEDIQCLESLEVLILSNNMLKRIPAGMGNLRKLRILDLEENRIEVLPNEIGFLRDLTKL 499

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            + +N +S LP  IG +++L  L +  N L +L   +        L+ L S L  N++  
Sbjct: 500 IIHSNQISVLPRAIGHLSSLVYLSVGDNNLTSLPEEI------GTLEKLES-LYVNDNLN 552

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 219
                 +L  +   L +    +S+E   LS IP+EI + G
Sbjct: 553 LHHLPFEL-ALCKNLHI----MSIENCPLSQIPAEIVQGG 587


>gi|417765306|ref|ZP_12413270.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352488|gb|EJP04673.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 405

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 165/336 (49%), Gaps = 19/336 (5%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ I  L  L +L L  NR+ ++P  I    +L E  + +N L+ LP E+GKL  L  L
Sbjct: 63  LPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRL 122

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL+ N+L    +E  +L+ L  L LS+N L+ LP E GK+  L++L L+ N L TL    
Sbjct: 123 DLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTL---- 178

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                P  +  L++    N  S   TT    I     L      L+L    L+ +P EI 
Sbjct: 179 -----PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQT----LNLSDNQLTTLPIEIG 229

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           +   +  L+LS N +  LP E+    +L TL LS N++      I   L +L  L L +N
Sbjct: 230 KLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI-GKLQNLQDLNLHSN 288

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            L  + S   + +  LQ L LSYN +  LP+      L +LQEL L   QL   P +I +
Sbjct: 289 QLTTL-SKEIEQLKNLQTLSLSYNRLVILPK--EIGQLQNLQELNLWNNQLTALPIEIGQ 345

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           LQ L+ L L +N L + P+    L +L  L L  +N
Sbjct: 346 LQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 381



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 169/355 (47%), Gaps = 43/355 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL      ++P  I    +L + Y+ +N L  LP E+G+L  L  L+L SNQL     E
Sbjct: 53  LDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKE 112

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L  L  LDL +N L+ LP EIGK+  L+ L L+ N L TL                 
Sbjct: 113 IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL----------------- 155

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                      S   E+L           +EL+L    L+ +P EI +   +  L+L  N
Sbjct: 156 --------PRESGKLENL-----------QELNLSDNQLTTLPQEIGQLQNLQTLNLKSN 196

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  L  E+    +LQTL LS N++   P  I   L +L  L L +N L  +P +  K +
Sbjct: 197 QLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEI-GKLQNLHTLNLSDNQLTTLPIEIGK-L 254

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L  L+LS N + +L        L +LQ+L L   QL     +I +L+ L+ L LS N 
Sbjct: 255 QNLHTLNLSGNQLTTLS--IEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNR 312

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L  +P+    L +L EL+L +N ++ALP E+G L+ +LQ L L  N L +  + I
Sbjct: 313 LVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQ-NLQTLSLYKNRLMTFPKEI 366



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 136/304 (44%), Gaps = 53/304 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+L  L    I     L EL  S N L  +P+ IG L  L RLDL+ NR+  
Sbjct: 73  LQKLYLFDNRLKTLPKE-IGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 61  IPSSISGCCSLAEFY-----------------------MGNNALSALPAELGKLSKLGTL 97
           +P  I    +L   Y                       + +N L+ LP E+G+L  L TL
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTL 191

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           +L SNQL     E  QL+ L  L+LS+N L+ LP EIGK+  L  L L+ N L TL    
Sbjct: 192 NLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTL---- 247

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTT----------KEDLITMATRLSVTSKE------ 200
                P  +  L++    N      TT           +DL   + +L+  SKE      
Sbjct: 248 -----PIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKN 302

Query: 201 ---LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              LSL    L  +P EI +   + +L+L  N +  LP E+    +LQTL L +N++  +
Sbjct: 303 LQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTF 362

Query: 258 PDAI 261
           P  I
Sbjct: 363 PKEI 366



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 137/291 (47%), Gaps = 42/291 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS  + + LP +I K+  L+KL L  N L+TL         P  +  L++   
Sbjct: 48  LNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTL---------PKEIGQLKNL-- 96

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                    +EL+L    L+ +P EI +   + +LDL  N +  
Sbjct: 97  -------------------------QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQTL LS N++   P      L +L  L L +N L  +P +    +  LQ
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRES-GKLENLQELNLSDNQLTTLPQE-IGQLQNLQ 189

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L+L  N + +L +      L +LQ L L   QL   P +I +LQ L  L+LS N L ++
Sbjct: 190 TLNLKSNQLTTLFK--EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTL 247

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P     L +L  L+LS N ++ L  E+G L+ +LQ L L  N L ++ + I
Sbjct: 248 PIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQ-NLQDLNLHSNQLTTLSKEI 297



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 113/213 (53%), Gaps = 6/213 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L G N + +P +I +   + KL L  N ++ LP E+    +LQ L
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            LS N++   P  I   L +L  L L +N L  +P +  K +  LQ L LS N + +LP 
Sbjct: 100 NLSSNQLTILPKEI-GKLENLQRLDLYDNRLTILPIEIGK-LQNLQTLYLSSNQLTTLPR 157

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +LQEL L   QL   P +I +LQ L+ L+L  N L ++ +  + L +L  L+
Sbjct: 158 ES--GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLN 215

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LSDN ++ LP E+G L+ +L  L L  N L ++
Sbjct: 216 LSDNQLTTLPIEIGKLQ-NLHTLNLSDNQLTTL 247


>gi|313224282|emb|CBY20071.1| unnamed protein product [Oikopleura dioica]
          Length = 529

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 201/443 (45%), Gaps = 69/443 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR--- 57
           + +LD+  NKL      +I   + L EL  + N L  +   +G+L  L+ LD  QN+   
Sbjct: 116 LKRLDLRHNKLEGDVPLVIYQLSSLMELYMTHNKLTRLMSGLGNLRNLVHLDFSQNKLTE 175

Query: 58  --------------------ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
                               + SIP +IS C SL+   M +N L +LP ++G    L +L
Sbjct: 176 VPSELGELKALQKLMLKSNHLTSIPEAISQCTSLSILDMSHNQLKSLPEKIGNCENLTSL 235

Query: 98  DLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
            L  N+L+     ++ C+ +L   ++ +N +S  PP   K  T+ ++L         R++
Sbjct: 236 SLKYNRLQVIPDSIDQCK-KLVHFNVESNQISCFPPSFLKKCTMIQVLTIS------RNT 288

Query: 156 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 215
             + P  + L  L +   +   ++ S+ +  +  +   L V      L    +  IP EI
Sbjct: 289 FKDIPDLSKLDNLTAF--DGSFNKISSLRPKVFALPKILKVL-----LHNNLIKIIPPEI 341

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
                +T+LD+S N ++ +   + +   LQ L +S N+++  PD I  S+ +L  L+LD 
Sbjct: 342 AIWKTVTELDISSNLLESVSVGIGNLDQLQELKISNNRLEFLPDTI-GSMKALRVLELDE 400

Query: 276 NPLRQVPSD-GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N +  VPSD GF     L++L+L+ N                        ++ + PTDI 
Sbjct: 401 NKIEYVPSDIGF--CTNLEVLNLTSN------------------------KIEQLPTDIG 434

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDG 393
            LQ+LR L L +N L  IP     L SL EL ++ N N+  LP  L     SLQ L +D 
Sbjct: 435 SLQRLRKLLLGENDLLQIPPHIGMLDSLQELFINSNLNLHNLPEHLANCR-SLQILSIDK 493

Query: 394 NPLRSIRRTILDRGTKAVLKYLK 416
            PL  I      RG   V++YLK
Sbjct: 494 CPLSEIPDEYRLRGPSFVVQYLK 516



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 177/399 (44%), Gaps = 44/399 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+       +S N+      L  L   KN ++ +P  IG L  +      +N+I S+P 
Sbjct: 49  LDLSDQNNHSMSANISELAKTLQNLYVQKNKIHTLPREIGCLREMQIFAASENQISSLPE 108

Query: 64  SISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 121
           S++   SL    + +N L   +P  + +LS L  L +  N+L         LR L  LD 
Sbjct: 109 SLANLTSLKRLDLRHNKLEGDVPLVIYQLSSLMELYMTHNKLTRLMSGLGNLRNLVHLDF 168

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
           S N L+ +P E+G++  L+KL+L  N L                    + +PE       
Sbjct: 169 SQNKLTEVPSELGELKALQKLMLKSNHL--------------------TSIPE------- 201

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
                 I+  T LS+    L +    L ++P +I     +T L L  N +Q +P  +  C
Sbjct: 202 -----AISQCTSLSI----LDMSHNQLKSLPEKIGNCENLTSLSLKYNRLQVIPDSIDQC 252

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 300
             L    +  N+I  +P + L   + +  L +  N  + +P      +  L   D S+N 
Sbjct: 253 KKLVHFNVESNQISCFPPSFLKKCTMIQVLTISRNTFKDIPD--LSKLDNLTAFDGSFNK 310

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
           I+SL   P   +LP + ++ L    ++  P +I   + +  LD+S N L+S+  G  NL 
Sbjct: 311 ISSL--RPKVFALPKILKVLLHNNLIKIIPPEIAIWKTVTELDISSNLLESVSVGIGNLD 368

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            L EL +S+N +  LP  +G ++ +L+ L LD N +  +
Sbjct: 369 QLQELKISNNRLEFLPDTIGSMK-ALRVLELDENKIEYV 406


>gi|390177720|ref|XP_003736468.1| GA26616, isoform D [Drosophila pseudoobscura pseudoobscura]
 gi|388859165|gb|EIM52541.1| GA26616, isoform D [Drosophila pseudoobscura pseudoobscura]
          Length = 616

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 194/396 (48%), Gaps = 21/396 (5%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK- 90
           +N L  +PE +G L +L  L +  N I+ + S   G  +L E +  NN +S +P  + + 
Sbjct: 234 QNDLTCLPEDMGLLRKLQFLYIQHNDIMEL-SDFEGNETLTELHASNNYISNIPISMCEN 292

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL  N++ +   E C LR     D+SNNS+  LP  +  +  L  L + GNP+
Sbjct: 293 LPHLKVLDLRDNKITQLPDELCLLRNLNRLDVSNNSIDTLPVSLSALAHLISLQVEGNPI 352

Query: 150 RTLRSSLVNGPTPALLKYLRSR-LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 208
           +++R  ++   T  +L+ L+ R + +++D   S +         RL          G + 
Sbjct: 353 KSIRRDILQCGTSRILRTLQERSMVKSKDEVESDSG-----AGARLCGGQA-----GNDT 402

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA---SLQTLILSRNKIKDWPDAILTSL 265
           +A   + ++      L ++   I ++P E+   A    +  +  +RN+++  PD +    
Sbjct: 403 AANYPDRYKLRHTRTLAVNLEEITDVPEEVFQLAQKEGVHVVDFARNQLRTVPDGLQHMQ 462

Query: 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQ 325
           + ++ L L +N + QVP    +   +  +   +  +  LP+   F  L  L+EL +   +
Sbjct: 463 NIVTELVLAHNRIGQVPQFISQFTRITLLNLSNNLLTDLPKE--FGVLNTLRELNIANNR 520

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
               P+ +  LQ L IL  S N +  +   G + +  L+ LDL +N+I  +PP LG L  
Sbjct: 521 FSFLPSGLYDLQGLEILIASDNHINELNVAGLQRMPRLSTLDLRNNDIDFIPPILGTLT- 579

Query: 385 SLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           ++  L L GNP R  R  IL +GT++++ YL+D++P
Sbjct: 580 NITHLELVGNPFRQPRHQILMKGTESIMSYLRDRVP 615



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 154/330 (46%), Gaps = 65/330 (19%)

Query: 113 QLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 172
           Q+ L+ LDLS+N+LS + P+I  + +L  L+L  N L  L         PA +  L   +
Sbjct: 86  QVPLTNLDLSSNALSHISPKIENLQSLTVLILHDNALVAL---------PAEIGKLEKLM 136

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
                               RL+V+  +       LS +P E++   E+  L++S N   
Sbjct: 137 --------------------RLNVSRNK-------LSDLPRELYSLPELRHLNISYNEFS 169

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
           EL P++S    L+ L    N IK  P  I   L  L+ L L  N ++ +P D   ++  L
Sbjct: 170 ELNPDISDLHMLEFLDAGHNSIKSLPGGI-GFLVRLTALLLPYNHIKDLPPD-LVNMRSL 227

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE--------------APTDIL--- 334
           Q LDL  N +  LPE+     L  LQ LY++   + E              A  + +   
Sbjct: 228 QRLDLMQNDLTCLPED--MGLLRKLQFLYIQHNDIMELSDFEGNETLTELHASNNYISNI 285

Query: 335 ------RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
                  L  L++LDL  N +  +P+    L +L  LD+S+N+I  LP  L  L   L +
Sbjct: 286 PISMCENLPHLKVLDLRDNKITQLPDELCLLRNLNRLDVSNNSIDTLPVSLSAL-AHLIS 344

Query: 389 LRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           L+++GNP++SIRR IL  GT  +L+ L+++
Sbjct: 345 LQVEGNPIKSIRRDILQCGTSRILRTLQER 374



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 2/172 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D   N+L  + + L     ++TEL+ + N +  +P+ I   +R+  L+L  N +  +P 
Sbjct: 444 VDFARNQLRTVPDGLQHMQNIVTELVLAHNRIGQVPQFISQFTRITLLNLSNNLLTDLPK 503

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDL 121
                 +L E  + NN  S LP+ L  L  L  L    N + E  V   Q   RLS LDL
Sbjct: 504 EFGVLNTLRELNIANNRFSFLPSGLYDLQGLEILIASDNHINELNVAGLQRMPRLSTLDL 563

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            NN +  +PP +G +T +  L L GNP R  R  ++   T +++ YLR R+P
Sbjct: 564 RNNDIDFIPPILGTLTNITHLELVGNPFRQPRHQILMKGTESIMSYLRDRVP 615



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 176/402 (43%), Gaps = 49/402 (12%)

Query: 20  ASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           A W    LT L  S N L+ +   I +L  L  L LH N ++++P+ I     L    + 
Sbjct: 82  AWWNQVPLTNLDLSSNALSHISPKIENLQSLTVLILHDNALVALPAEIGKLEKLMRLNVS 141

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
            N LS LP EL  L +L  L++  N+  E   +   L  L  LD  +NS+  LP  IG +
Sbjct: 142 RNKLSDLPRELYSLPELRHLNISYNEFSELNPDISDLHMLEFLDAGHNSIKSLPGGIGFL 201

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPEN------------------ 175
             L  LLL  N ++ L   LVN  +   L  +++    LPE+                  
Sbjct: 202 VRLTALLLPYNHIKDLPPDLVNMRSLQRLDLMQNDLTCLPEDMGLLRKLQFLYIQHNDIM 261

Query: 176 --EDSEASTTKEDL-----------ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 222
              D E + T  +L           I+M   L    K L L    ++ +P E+     + 
Sbjct: 262 ELSDFEGNETLTELHASNNYISNIPISMCENLPHL-KVLDLRDNKITQLPDELCLLRNLN 320

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL---- 278
           +LD+S NSI  LP  LS+ A L +L +  N IK     IL   +S     L    +    
Sbjct: 321 RLDVSNNSIDTLPVSLSALAHLISLQVEGNPIKSIRRDILQCGTSRILRTLQERSMVKSK 380

Query: 279 RQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
            +V SD      +      +   A+ P+      L H + L +   ++ + P ++ +L Q
Sbjct: 381 DEVESDSGAGARLCGGQAGNDTAANYPDR---YKLRHTRTLAVNLEEITDVPEEVFQLAQ 437

Query: 339 ---LRILDLSQNSLQSIPEGFKNLTSL-TELDLSDNNISALP 376
              + ++D ++N L+++P+G +++ ++ TEL L+ N I  +P
Sbjct: 438 KEGVHVVDFARNQLRTVPDGLQHMQNIVTELVLAHNRIGQVP 479



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 82/181 (45%), Gaps = 27/181 (14%)

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
           W    +T LDLS N++  + P++ +  SL  LIL  N +   P A +  L  L  L +  
Sbjct: 84  WNQVPLTNLDLSSNALSHISPKIENLQSLTVLILHDNALVALP-AEIGKLEKLMRLNVSR 142

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
           N L  +P + +  +P L+ L++SYN                        +  E   DI  
Sbjct: 143 NKLSDLPRELYS-LPELRHLNISYN------------------------EFSELNPDISD 177

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L  L  LD   NS++S+P G   L  LT L L  N+I  LPP+L  +  SLQ L L  N 
Sbjct: 178 LHMLEFLDAGHNSIKSLPGGIGFLVRLTALLLPYNHIKDLPPDLVNMR-SLQRLDLMQND 236

Query: 396 L 396
           L
Sbjct: 237 L 237


>gi|260825680|ref|XP_002607794.1| hypothetical protein BRAFLDRAFT_275098 [Branchiostoma floridae]
 gi|229293143|gb|EEN63804.1| hypothetical protein BRAFLDRAFT_275098 [Branchiostoma floridae]
          Length = 553

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 168/373 (45%), Gaps = 45/373 (12%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L G+P+ +  L+ L  L L +N +  +P +I    +L   Y+  N L  LP E+G+L  L
Sbjct: 35  LEGLPDRLWELTDLEELHLEKNHLKELPDNIKLLKNLTTLYLHGNDLETLPPEVGQLGHL 94

Query: 95  GTLDLHSN-QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK-MTTLRKLLLTGNPLRT 151
            +LD+ +N + K       QLR L VL L N  L  +P +I K +  L  L L GN L  
Sbjct: 95  ESLDVSNNPEFKIPLEHLLQLRQLKVLRLHNLHLGQVPEDILKWLLNLEILGLNGNQLV- 153

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
                                             DL     RL+   KEL L   N S +
Sbjct: 154 ----------------------------------DLPIYTVRLN-KLKELHLRNNNFSTL 178

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P  +     +T LDL  N + +LP E+    +LQ + L  N     P   L +L +++ L
Sbjct: 179 PVHVCSLSALTTLDLEGNKLHDLPNEIVQLVNLQEVYLQNNFFHHLP-VQLCALGNIAVL 237

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
           +L  N ++++P D  + +  L+ ++ S N I  LP+     +L +L+ LY +   L+  P
Sbjct: 238 ELHGNHVKEIPPDICR-LAKLREVNFSNNKIEKLPKE--VGALVNLEVLYAKSNFLKSLP 294

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
               RLQ+LR +D +QN  + +P     L +L  L + DNN+  +P E+  L   L+ L 
Sbjct: 295 KAFGRLQRLRFVDFAQNRFEEMPVSLCMLGNLAVLAMDDNNLYHIPKEVANLR-KLKELG 353

Query: 391 LDGNPLRSIRRTI 403
           L GN        I
Sbjct: 354 LSGNVFEKFPEAI 366



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 160/355 (45%), Gaps = 40/355 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N  + +P  + SLS L  LDL  N++  +P+ I    +L E Y+ NN    L
Sbjct: 165 LKELHLRNNNFSTLPVHVCSLSALTTLDLEGNKLHDLPNEIVQLVNLQEVYLQNNFFHHL 224

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P +L  L  +  L+LH N +KE   + C+L +L  ++ SNN +  LP E+G +  L  L 
Sbjct: 225 PVQLCALGNIAVLELHGNHVKEIPPDICRLAKLREVNFSNNKIEKLPKEVGALVNLEVLY 284

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
              N L++L  +         + + ++R  E   S         + M   L+V    L++
Sbjct: 285 AKSNFLKSLPKAFGRLQRLRFVDFAQNRFEEMPVS---------LCMLGNLAV----LAM 331

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +  NL  IP E+    ++ +L LS N  ++ P  + +  SL+ L L ++           
Sbjct: 332 DDNNLYHIPKEVANLRKLKELGLSGNVFEKFPEAICNLPSLEKLFLGQDH---------- 381

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
                         L  VPS     +  LQ L L YN + +LP++   S LP L  L   
Sbjct: 382 -----------GQQLTSVPST-ISKLTSLQDLCLEYNALTTLPDS--ISQLPALSRLSCH 427

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
              L++ P  I  L+ L+ L L  N L ++P  F  LT+L EL + D    A PP
Sbjct: 428 DNYLQKLPDSICELKALKYLYLHNNLLTALPSDFDFLTTLKELRI-DAEKFAYPP 481



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 183/429 (42%), Gaps = 69/429 (16%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T L EL   KN L  +P+ I  L  L  L LH N + ++P  +     L    + NN   
Sbjct: 46  TDLEELHLEKNHLKELPDNIKLLKNLTTLYLHGNDLETLPPEVGQLGHLESLDVSNNPEF 105

Query: 83  ALPAE-LGKLSKLGTLDLHS------------------------NQLKEYCVEACQL-RL 116
            +P E L +L +L  L LH+                        NQL +  +   +L +L
Sbjct: 106 KIPLEHLLQLRQLKVLRLHNLHLGQVPEDILKWLLNLEILGLNGNQLVDLPIYTVRLNKL 165

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 176
             L L NN+ S LP  +  ++ L  L L GN L  L + +V      L+      L  N 
Sbjct: 166 KELHLRNNNFSTLPVHVCSLSALTTLDLEGNKLHDLPNEIVQ-----LVNLQEVYLQNNF 220

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
                     L  +A         L L G ++  IP +I    ++ +++ S N I++LP 
Sbjct: 221 FHHLPVQLCALGNIAV--------LELHGNHVKEIPPDICRLAKLREVNFSNNKIEKLPK 272

Query: 237 ELSSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLD 274
           E+ +  +L+ L    N +K  P A                       L  L +L+ L +D
Sbjct: 273 EVGALVNLEVLYAKSNFLKSLPKAFGRLQRLRFVDFAQNRFEEMPVSLCMLGNLAVLAMD 332

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQELYLRR---MQLREAP 330
           +N L  +P +   ++  L+ L LS N+    PE     +LP L++L+L +    QL   P
Sbjct: 333 DNNLYHIPKE-VANLRKLKELGLSGNVFEKFPE--AICNLPSLEKLFLGQDHGQQLTSVP 389

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
           + I +L  L+ L L  N+L ++P+    L +L+ L   DN +  LP  +  L+ +L+ L 
Sbjct: 390 STISKLTSLQDLCLEYNALTTLPDSISQLPALSRLSCHDNYLQKLPDSICELK-ALKYLY 448

Query: 391 LDGNPLRSI 399
           L  N L ++
Sbjct: 449 LHNNLLTAL 457



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 187/445 (42%), Gaps = 70/445 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +E N L  L +N I     LT L    N L  +P  +G L  L  LD+  N    
Sbjct: 48  LEELHLEKNHLKELPDN-IKLLKNLTTLYLHGNDLETLPPEVGQLGHLESLDVSNNPEFK 106

Query: 61  IP-SSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQL-RLS 117
           IP   +     L    + N  L  +P ++ K L  L  L L+ NQL +  +   +L +L 
Sbjct: 107 IPLEHLLQLRQLKVLRLHNLHLGQVPEDILKWLLNLEILGLNGNQLVDLPIYTVRLNKLK 166

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            L L NN+ S LP  +  ++ L  L L GN L  L + +V      L+      L  N  
Sbjct: 167 ELHLRNNNFSTLPVHVCSLSALTTLDLEGNKLHDLPNEIVQ-----LVNLQEVYLQNNFF 221

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                    L  +A         L L G ++  IP +I    ++ +++ S N I++LP E
Sbjct: 222 HHLPVQLCALGNIAV--------LELHGNHVKEIPPDICRLAKLREVNFSNNKIEKLPKE 273

Query: 238 LSSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDN 275
           + +  +L+ L    N +K  P A                       L  L +L+ L +D+
Sbjct: 274 VGALVNLEVLYAKSNFLKSLPKAFGRLQRLRFVDFAQNRFEEMPVSLCMLGNLAVLAMDD 333

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQELYLRR---MQLREAPT 331
           N L  +P +   ++  L+ L LS N+    PE     +LP L++L+L +    QL   P+
Sbjct: 334 NNLYHIPKE-VANLRKLKELGLSGNVFEKFPE--AICNLPSLEKLFLGQDHGQQLTSVPS 390

Query: 332 DILRLQQLRILDLSQNSL-----------------------QSIPEGFKNLTSLTELDLS 368
            I +L  L+ L L  N+L                       Q +P+    L +L  L L 
Sbjct: 391 TISKLTSLQDLCLEYNALTTLPDSISQLPALSRLSCHDNYLQKLPDSICELKALKYLYLH 450

Query: 369 DNNISALPPELGLLEPSLQALRLDG 393
           +N ++ALP +   L  +L+ LR+D 
Sbjct: 451 NNLLTALPSDFDFL-TTLKELRIDA 474



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 4/215 (1%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L  +P  +WE  ++ +L L +N ++ELP  +    +L TL L  N ++  P  +   L  
Sbjct: 35  LEGLPDRLWELTDLEELHLEKNHLKELPDNIKLLKNLTTLYLHGNDLETLPPEV-GQLGH 93

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQL 326
           L  L + NNP  ++P +    +  L++L L + ++  +PE+     L +L+ L L   QL
Sbjct: 94  LESLDVSNNPEFKIPLEHLLQLRQLKVLRLHNLHLGQVPED-ILKWLLNLEILGLNGNQL 152

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
            + P   +RL +L+ L L  N+  ++P    +L++LT LDL  N +  LP E+  L  +L
Sbjct: 153 VDLPIYTVRLNKLKELHLRNNNFSTLPVHVCSLSALTTLDLEGNKLHDLPNEIVQL-VNL 211

Query: 387 QALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
           Q + L  N    +   +   G  AVL+   + + E
Sbjct: 212 QEVYLQNNFFHHLPVQLCALGNIAVLELHGNHVKE 246



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 1/108 (0%)

Query: 7   EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 66
            G +LT + +  I+  T L +L    N L  +P++I  L  L RL  H N +  +P SI 
Sbjct: 381 HGQQLTSVPST-ISKLTSLQDLCLEYNALTTLPDSISQLPALSRLSCHDNYLQKLPDSIC 439

Query: 67  GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 114
              +L   Y+ NN L+ALP++   L+ L  L + + +      + C++
Sbjct: 440 ELKALKYLYLHNNLLTALPSDFDFLTTLKELRIDAEKFAYPPADVCRI 487



 Score = 38.1 bits (87), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 1/95 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +E N LT L ++ I+    L+ L    N L  +P++I  L  L  L LH N + +
Sbjct: 398 LQDLCLEYNALTTLPDS-ISQLPALSRLSCHDNYLQKLPDSICELKALKYLYLHNNLLTA 456

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 95
           +PS      +L E  +     +  PA++ ++  LG
Sbjct: 457 LPSDFDFLTTLKELRIDAEKFAYPPADVCRIGFLG 491


>gi|320166208|gb|EFW43107.1| tyrosine-protein kinase Src42A [Capsaspora owczarzaki ATCC 30864]
          Length = 1869

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 199/468 (42%), Gaps = 73/468 (15%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET-IGSLSRLIRLDLHQNRILSIP 62
           L +  N++T +S++     T LT L  + N L+ +P +    L+ L +L L+ N+I ++P
Sbjct: 64  LYLSSNQITSISSSAFTGLTALTYLQLNNNWLSAIPSSAFTGLTALTQLQLYNNQITTVP 123

Query: 63  SS-ISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSV 118
           SS  +G  +L   Y+ NN ++ +       L+ L  L L++NQ+      A     +L+ 
Sbjct: 124 SSAFTGLTALQTLYLYNNQIATVAINAFSGLTALVQLYLYNNQITSISANAFSGLSKLNT 183

Query: 119 LDLSNNSLSGLPPE-IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
           L L+NN LS +P      +T L +LLL  N + T+ SS   G T     YL +       
Sbjct: 184 LQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTVPSSAFTGLTALQTLYLYNNQIATVA 243

Query: 178 SEASTTKEDLITM-----------ATRLSVTSKELSLEGMN--LSAIPSEIWEA-GEITK 223
             A +    L+ +           A   S  SK  +L   N  LSAIPS  +     +T+
Sbjct: 244 INAFSGLTALVQLRLDTNQITTVPANAFSGLSKLNTLHLYNNWLSAIPSSAFTGLTALTQ 303

Query: 224 LDLSRNSIQELPPE-------------------------LSSCASLQTLILSRNKIKDWP 258
           L L  N I  +P                            S  A+LQ L L  N+I   P
Sbjct: 304 LRLDTNQITTVPSSAFTGLTALQTLYLYNNQIITVATNAFSGLAALQVLRLDTNQITTVP 363

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
               + LS+L+ L+L NN L  +PS  F  +  L  L L  N I ++P +  F+ L  LQ
Sbjct: 364 ANAFSGLSALNTLQLSNNWLSAIPSSAFTGLTALTQLQLYNNQITTVPSS-AFTGLTALQ 422

Query: 318 ELYLRRMQLREAPTDILR-------------------------LQQLRILDLSQNSLQSI 352
            LYL   Q+     +                            L +L  L L+ N L +I
Sbjct: 423 TLYLYNNQIATVAINAFSGLTALVQLYLYNNQITSISANAFSGLSKLNTLQLNNNWLSAI 482

Query: 353 P-EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           P   F  LT+LT+L L +N I+ +P        +LQ L L  N + ++
Sbjct: 483 PSSAFTGLTALTQLLLYNNQITTVPSSAFTGLTALQFLYLYNNQIATV 530



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 181/420 (43%), Gaps = 71/420 (16%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET-IGSLSRLIRLDLHQNRILSIP 62
           L ++ N++T +  N  +  + L  L  S N L+ +P +    L+ L +L L+ N+I ++P
Sbjct: 352 LRLDTNQITTVPANAFSGLSALNTLQLSNNWLSAIPSSAFTGLTALTQLQLYNNQITTVP 411

Query: 63  SS-ISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSV 118
           SS  +G  +L   Y+ NN ++ +       L+ L  L L++NQ+      A     +L+ 
Sbjct: 412 SSAFTGLTALQTLYLYNNQIATVAINAFSGLTALVQLYLYNNQITSISANAFSGLSKLNT 471

Query: 119 LDLSNNSLSGLPPE-IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
           L L+NN LS +P      +T L +LLL  N + T+ SS   G T     YL +       
Sbjct: 472 LQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTVPSSAFTGLTALQFLYLYNNQIATVA 531

Query: 178 SEASTTKEDLITM-----------ATRLSVTSKELSLEGMN--LSAIPSEIWEA-GEITK 223
             A +    L+ +           A   S  SK  +L   N  LSAIPS  +     +T+
Sbjct: 532 INAFSGLTALVQLRLDTNQITTVPANAFSGLSKLNTLHLYNNWLSAIPSSAFTGLTALTQ 591

Query: 224 LDLSRNSIQELPPE-------------------------LSSCASLQTLILSRNKIKDWP 258
           L L  N I  +P                            S   +L  L L  N+I   P
Sbjct: 592 LRLDTNQITTVPANAFSGLTALLYLYLYNNQITTVPANAFSGLTALVQLQLYGNQITTIP 651

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
            + LT LS+L+ L L NN +  VP++GF  +  L  L L  N I S+  N          
Sbjct: 652 SSALTGLSALTQLLLYNNRITSVPANGFSGLTALTDLRLFNNTITSILANA--------- 702

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG-FKNLTSLTELDLSDNNISALP 376
                             L +L  LDLS N L SIP G F  LT+LT+L L +N +SA+P
Sbjct: 703 ---------------FTGLTKLTYLDLSLNQLTSIPAGAFSGLTALTQLLLYNNWLSAVP 747



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 185/407 (45%), Gaps = 41/407 (10%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET-IGSLSRLIRLDLHQNRIL 59
            ++ LD+  N+LT +     +  T LT+L+   N L+ +P +    L+ L+ L L+ N+I 
Sbjct: 709  LTYLDLSLNQLTSIPAGAFSGLTALTQLLLYNNWLSAVPSSAFTGLTALLYLYLYNNQIT 768

Query: 60   SIPS-SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQ--LR 115
            ++ + + +G  +L +  +  N ++ + A     +S L  L L+SN++    V A      
Sbjct: 769  TVAANAFTGLTALVQLQLYGNQITTISASAFAGMSSLVQLYLYSNRITAIFVNAFTGLTH 828

Query: 116  LSVLDLSNNSLSGLPPE-IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
            LS+LD+SNN ++ LP      +T + +L L  N L  + SS   G T     +L +    
Sbjct: 829  LSLLDISNNQITSLPANAFTGLTAMTQLSLYNNSLSAVPSSAFTGLTALQALWLYNNQIT 888

Query: 175  NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
            +    A T+   L+           +L L G  ++ IP+  +    ++KL L        
Sbjct: 889  SVVVNAFTSLTALV-----------QLQLYGNQITTIPASAFSG--LSKLSL-------- 927

Query: 235  PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
                        L L+ N +   P +  T L++L+ L+L NN +  VPS  F  +  L  
Sbjct: 928  ------------LQLNNNWLSAIPSSAFTGLTALTQLQLYNNQITTVPSSAFTGLTALTQ 975

Query: 295  LDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE-APTDILRLQQLRILDLSQNSLQSIP 353
            L L  N  +      F+ L  LQ LYL    +   A      L  L  LDLS + + SIP
Sbjct: 976  LSLYGNQITTISASAFAGLTALQALYLNNNTITTIAANAFAGLTALNWLDLSGSQITSIP 1035

Query: 354  EG-FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
               F +L +L +L+L +N +SA+P        +L  L + GN + +I
Sbjct: 1036 ANVFSSLPALAQLNLYNNWLSAVPTSAFTGLTALTQLTMYGNRITTI 1082



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 189/448 (42%), Gaps = 73/448 (16%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET-IGSLSRLIRLDLHQNRILSI 61
           +L +  N++T +S N  +  + L  L  + N L+ +P +    L+ L +L L+ N+I ++
Sbjct: 159 QLYLYNNQITSISANAFSGLSKLNTLQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTV 218

Query: 62  PSS-ISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLS 117
           PSS  +G  +L   Y+ NN ++ +       L+ L  L L +NQ+      A     +L+
Sbjct: 219 PSSAFTGLTALQTLYLYNNQIATVAINAFSGLTALVQLRLDTNQITTVPANAFSGLSKLN 278

Query: 118 VLDLSNNSLSGLPPE-IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR--LPE 174
            L L NN LS +P      +T L +L L  N + T+ SS   G T     YL +   +  
Sbjct: 279 TLHLYNNWLSAIPSSAFTGLTALTQLRLDTNQITTVPSSAFTGLTALQTLYLYNNQIITV 338

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMN-----------LSAIPSEIWEA-GEIT 222
             ++ +      ++ + T    T    +  G++           LSAIPS  +     +T
Sbjct: 339 ATNAFSGLAALQVLRLDTNQITTVPANAFSGLSALNTLQLSNNWLSAIPSSAFTGLTALT 398

Query: 223 KLDLSRNSIQELPPE-LSSCASLQTLILSRNKIK-------------------------- 255
           +L L  N I  +P    +   +LQTL L  N+I                           
Sbjct: 399 QLQLYNNQITTVPSSAFTGLTALQTLYLYNNQIATVAINAFSGLTALVQLYLYNNQITSI 458

Query: 256 ------------------DW----PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
                             +W    P +  T L++L+ L L NN +  VPS  F  +  LQ
Sbjct: 459 SANAFSGLSKLNTLQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTVPSSAFTGLTALQ 518

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQS 351
            L L  N IA++  N  FS L  L +L L   Q+   P +    L +L  L L  N L +
Sbjct: 519 FLYLYNNQIATVAIN-AFSGLTALVQLRLDTNQITTVPANAFSGLSKLNTLHLYNNWLSA 577

Query: 352 IP-EGFKNLTSLTELDLSDNNISALPPE 378
           IP   F  LT+LT+L L  N I+ +P  
Sbjct: 578 IPSSAFTGLTALTQLRLDTNQITTVPAN 605



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 180/423 (42%), Gaps = 63/423 (14%)

Query: 3    KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
            +L + GN++T + ++ +   + LT+L+                       L+ NRI S+P
Sbjct: 639  QLQLYGNQITTIPSSALTGLSALTQLL-----------------------LYNNRITSVP 675

Query: 63   S-SISGCCSLAEFYMGNNALSALPA-ELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
            +   SG  +L +  + NN ++++ A     L+KL  LDL  NQL                
Sbjct: 676  ANGFSGLTALTDLRLFNNTITSILANAFTGLTKLTYLDLSLNQLTS-------------- 721

Query: 121  LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
            +   + SGL       T L +LLL  N L  + SS   G T  L            +++ 
Sbjct: 722  IPAGAFSGL-------TALTQLLLYNNWLSAVPSSAFTGLTALLYL-------YLYNNQI 767

Query: 181  STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQEL-PPEL 238
            +T   +  T  T L     +L L G  ++ I +  +     + +L L  N I  +     
Sbjct: 768  TTVAANAFTGLTAL----VQLQLYGNQITTISASAFAGMSSLVQLYLYSNRITAIFVNAF 823

Query: 239  SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
            +    L  L +S N+I   P    T L++++ L L NN L  VPS  F  +  LQ L L 
Sbjct: 824  TGLTHLSLLDISNNQITSLPANAFTGLTAMTQLSLYNNSLSAVPSSAFTGLTALQALWLY 883

Query: 299  YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP-EG 355
             N I S+  N  F+SL  L +L L   Q+   P      L +L +L L+ N L +IP   
Sbjct: 884  NNQITSVVVN-AFTSLTALVQLQLYGNQITTIPASAFSGLSKLSLLQLNNNWLSAIPSSA 942

Query: 356  FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
            F  LT+LT+L L +N I+ +P        +L  L L GN + +I  +     T     YL
Sbjct: 943  FTGLTALTQLQLYNNQITTVPSSAFTGLTALTQLSLYGNQITTISASAFAGLTALQALYL 1002

Query: 416  KDK 418
             + 
Sbjct: 1003 NNN 1005



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 183/388 (47%), Gaps = 23/388 (5%)

Query: 3    KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM-PETIGSLSRLIRLDLHQNRILSI 61
            +L + GN++T +S +  A  + L +L    N +  +       L+ L  LD+  N+I S+
Sbjct: 783  QLQLYGNQITTISASAFAGMSSLVQLYLYSNRITAIFVNAFTGLTHLSLLDISNNQITSL 842

Query: 62   PS-SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLS 117
            P+ + +G  ++ +  + NN+LSA+P+     L+ L  L L++NQ+    V A      L 
Sbjct: 843  PANAFTGLTAMTQLSLYNNSLSAVPSSAFTGLTALQALWLYNNQITSVVVNAFTSLTALV 902

Query: 118  VLDLSNNSLSGLPPE-IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 176
             L L  N ++ +P      ++ L  L L  N L  + SS   G T AL +       +  
Sbjct: 903  QLQLYGNQITTIPASAFSGLSKLSLLQLNNNWLSAIPSSAFTGLT-ALTQL------QLY 955

Query: 177  DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELP 235
            +++ +T      T  T L+    +LSL G  ++ I +  +     +  L L+ N+I  + 
Sbjct: 956  NNQITTVPSSAFTGLTALT----QLSLYGNQITTISASAFAGLTALQALYLNNNTITTIA 1011

Query: 236  PE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
                +   +L  L LS ++I   P  + +SL +L+ L L NN L  VP+  F  +  L  
Sbjct: 1012 ANAFAGLTALNWLDLSGSQITSIPANVFSSLPALAQLNLYNNWLSAVPTSAFTGLTALTQ 1071

Query: 295  LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE-APTDILRLQQLRILDLSQNSLQSI 352
            L +  N I ++  N  F+ L  L +L+L+  Q+   + +    L  L  L LS N + +I
Sbjct: 1072 LTMYGNRITTISAN-AFTGLNALVQLFLQSNQITTISASAFTGLSLLTQLYLSNNQITTI 1130

Query: 353  -PEGFKNLTSLTELDLSDNNISALPPEL 379
                F  LT LT L L+DN  + LPP L
Sbjct: 1131 SANAFTGLTLLTTLTLNDNPATTLPPGL 1158



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 82/185 (44%), Gaps = 28/185 (15%)

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 300
           A+   L LS N+I     +  T L++L+ L+L+NN L  +PS  F  +  L  L L  N 
Sbjct: 59  ATTTILYLSSNQITSISSSAFTGLTALTYLQLNNNWLSAIPSSAFTGLTALTQLQLYNNQ 118

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR------------------------- 335
           I ++P +  F+ L  LQ LYL   Q+     +                            
Sbjct: 119 ITTVPSS-AFTGLTALQTLYLYNNQIATVAINAFSGLTALVQLYLYNNQITSISANAFSG 177

Query: 336 LQQLRILDLSQNSLQSIP-EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           L +L  L L+ N L +IP   F  LT+LT+L L +N I+ +P        +LQ L L  N
Sbjct: 178 LSKLNTLQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTVPSSAFTGLTALQTLYLYNN 237

Query: 395 PLRSI 399
            + ++
Sbjct: 238 QIATV 242



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 142/345 (41%), Gaps = 67/345 (19%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET------------------- 41
            +S LD+  N++T L  N     T +T+L    N L+ +P +                   
Sbjct: 829  LSLLDISNNQITSLPANAFTGLTAMTQLSLYNNSLSAVPSSAFTGLTALQALWLYNNQIT 888

Query: 42   ------IGSLSRLIRLDLHQNRILSIPSS-ISGCCSLAEFYMGNNALSALPAE-LGKLSK 93
                    SL+ L++L L+ N+I +IP+S  SG   L+   + NN LSA+P+     L+ 
Sbjct: 889  SVVVNAFTSLTALVQLQLYGNQITTIPASAFSGLSKLSLLQLNNNWLSAIPSSAFTGLTA 948

Query: 94   LGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPE-IGKMTTLRKLLLTGNPLR 150
            L  L L++NQ+      A      L+ L L  N ++ +       +T L+ L L  N + 
Sbjct: 949  LTQLQLYNNQITTVPSSAFTGLTALTQLSLYGNQITTISASAFAGLTALQALYLNNNTIT 1008

Query: 151  TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
            T+ ++   G T   L +L     +   S+ ++   ++ +    L+    +L+L    LSA
Sbjct: 1009 TIAANAFAGLTA--LNWL-----DLSGSQITSIPANVFSSLPALA----QLNLYNNWLSA 1057

Query: 211  IPSEIWEA-GEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
            +P+  +     +T+L +  N I  +     +   +L  L L  N+I     +  T LS L
Sbjct: 1058 VPTSAFTGLTALTQLTMYGNRITTISANAFTGLNALVQLFLQSNQITTISASAFTGLSLL 1117

Query: 269  SCLKL------------------------DNNPLRQVPSDGFKDI 289
            + L L                        ++NP   +P   FK +
Sbjct: 1118 TQLYLSNNQITTISANAFTGLTLLTTLTLNDNPATTLPPGLFKGL 1162


>gi|428176053|gb|EKX44939.1| hypothetical protein GUITHDRAFT_71659, partial [Guillardia theta
           CCMP2712]
          Length = 331

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 177/381 (46%), Gaps = 66/381 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL V+ N +  L +  I S TML E+ AS N +  +  +IG+LS L+ L+L +N IL 
Sbjct: 15  LQKLRVDSNSIAELPHA-IGSLTMLREIRASDNAIASVARSIGNLSCLVGLNLQRNMILR 73

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-L 119
           +P  I  CC L +  +  N ++ LP+ L KL+ L  L   SN+L+    +A +L   V L
Sbjct: 74  LPLEIGDCCLLEKLILSQNRIARLPSSLSKLASLKVLKADSNKLQVVGFDASRLSCLVKL 133

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++N+L+ L   +G+  +L +L L  N L TL  SL   P    LK +  RL EN    
Sbjct: 134 ALNHNNLTMLHLSVGQAPSLSELFLQRNQLVTLPPSLAFTP----LKII--RLDENP--- 184

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                       L   P E+  AG +T+L L  NS+ ELP E+ 
Sbjct: 185 ----------------------------LLRPPVEVTRAGSLTRLSLEGNSLLELPVEIE 216

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
             + L TL L  N++   P  I   +S+L  L + +N L+ +P+   K++          
Sbjct: 217 ILSLLVTLDLQYNQLSMLPPGI-GGMSNLEVLDIASNRLQALPAQMRKNV---------- 265

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                           LQEL L   +  + P+ I RL  +  L L+ N +  +P     +
Sbjct: 266 ---------------MLQELLLENNRFIQIPS-IGRLSNITQLKLNNNLVARLPRSIAFM 309

Query: 360 TSLTELDLSDNNISALPPELG 380
           T L +L LS N ++ +P E+G
Sbjct: 310 TQLKDLQLSTNLLADVPSEVG 330



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 89/190 (46%), Gaps = 7/190 (3%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L   PS +     + KL +  NSI ELP  + S   L+ +  S N I     +I  +LS 
Sbjct: 2   LQEFPSCLASLRLLQKLRVDSNSIAELPHAIGSLTMLREIRASDNAIASVARSI-GNLSC 60

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L L  N + ++P +   D  +L+ L LS N IA LP +   S L  L+ L     +L
Sbjct: 61  LVGLNLQRNMILRLPLE-IGDCCLLEKLILSQNRIARLPSS--LSKLASLKVLKADSNKL 117

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
           +    D  RL  L  L L+ N+L  +        SL+EL L  N +  LPP L      L
Sbjct: 118 QVVGFDASRLSCLVKLALNHNNLTMLHLSVGQAPSLSELFLQRNQLVTLPPSLAF--TPL 175

Query: 387 QALRLDGNPL 396
           + +RLD NPL
Sbjct: 176 KIIRLDENPL 185


>gi|357625551|gb|EHJ75953.1| putative Erbb2 interacting protein isoform 2 [Danaus plexippus]
          Length = 722

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 185/404 (45%), Gaps = 41/404 (10%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +LD   + LT +   +      L  L+   N +  +P  +     L  LDL  N + +IP
Sbjct: 18  ELDYSHHSLTDVPTEVFVYERTLETLLCQSNRITELPRQLFMCHGLKYLDLSDNELQAIP 77

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
           ++IS   +L    +  N L+++P  +  L  L  LDL  N L++       L  +  L L
Sbjct: 78  TAISSLVNLQHLNLSRNTLASIPDNMKSLKNLMFLDLSVNPLEKLPETITNLIAMQDLYL 137

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
           ++  L  LP   G++  LR L L  N L  L  SL           LR  + +NE  +  
Sbjct: 138 NDTYLEYLPGNFGRLANLRILELRDNYLMILPKSLSRS-----TDLLRLDIGQNEFQQFP 192

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
               ++I   ++L    KEL ++  + + IP+ I     +  L+ S N I+EL PE+  C
Sbjct: 193 ----EVIGRFSKL----KELWIDSNSFTIIPAVIKPLDNLIHLEASNNMIEELAPEIGYC 244

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
           + L+ L LS N +   PD I   LS+L+ LKLDNN L  +P                   
Sbjct: 245 SRLEDLTLSVNSLTQLPDTI-GQLSNLTALKLDNNRLYSIPES----------------- 286

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
                      L +L+EL L    + + P+ I  L++L+ L++ +N L+ IP    +   
Sbjct: 287 --------IGQLKNLEELMLMSNYIDKLPSSIGLLRKLQYLNVDENMLRVIPPEIGSCAK 338

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
           L+ L +  N ++ +PPE+G L  SL+ L L  N L  + +++L+
Sbjct: 339 LSVLSVRSNKLTKIPPEIGHLT-SLRVLNLVRNSLSYLPQSLLN 381


>gi|428186142|gb|EKX54993.1| hypothetical protein GUITHDRAFT_62926 [Guillardia theta CCMP2712]
          Length = 495

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 178/370 (48%), Gaps = 25/370 (6%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           SKN L  + E I +L  L +L LH+N I  +P  IS   SL EF +  N L  LP  L +
Sbjct: 89  SKNGLVAIHEEISNLVNLEQLKLHENEITEVPECISALQSLKEFSLSQNNLVQLPNSLPQ 148

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L+ L  L +  N L E      +++ L+ L L  N ++ +P E+G +T L  L+LT N L
Sbjct: 149 LTGLKNLLVAKNNLSEIPDLIFKIQTLTKLILVENHITKVPKELGLLTNLTDLVLTYNKL 208

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
           +TL   +       L K     L EN  +E   + E L ++        KELS     ++
Sbjct: 209 KTLPKEI-----GELWKLDYLVLDENMITELPDSIEHLTSL--------KELSFNDNRIT 255

Query: 210 AIPSEIWEAG--EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSL 265
             P  +      EI +L LS N I  + P L     L  L L+ N+++  P++I  L  L
Sbjct: 256 RFPLSLGALTQLEILELSLSENRISRMHPALFKLTQLTILNLNSNRLQKIPESIRNLEQL 315

Query: 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQ 325
            + SC    +N +  +P +  +   + Q++    NI  +   P    L  L+ L L + Q
Sbjct: 316 VTFSC---GSNFIEDIPPEICELDNLRQLVLFGNNIRHVC--PELGGLTGLEVLSLSQNQ 370

Query: 326 LREAPTDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
           L + P  +L+ L  L+ L L+ N L SIP     L  L +L L DN + +LPP++G L+ 
Sbjct: 371 LTDIPKQMLKTLTNLKELWLAFNHLHSIPSSIGYLKHLEQLWLQDNELESLPPQIGSLK- 429

Query: 385 SLQALRLDGN 394
           +L  L L GN
Sbjct: 430 NLNVLTLTGN 439



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 160/361 (44%), Gaps = 45/361 (12%)

Query: 43  GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 102
           G+L  L  + L  N I  +P+ IS    L       N +  LPA +G L  L +LDL  N
Sbjct: 32  GNLKYLQEVVLDHNNIQILPAVISQMPCLESLNASANLIQTLPASVGNLISLKSLDLSKN 91

Query: 103 QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 161
            L     E   L  L  L L  N ++ +P  I  + +L++  L+ N L  L +SL     
Sbjct: 92  GLVAIHEEISNLVNLEQLKLHENEITEVPECISALQSLKEFSLSQNNLVQLPNSL----- 146

Query: 162 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 221
           P L                                  K L +   NLS IP  I++   +
Sbjct: 147 PQL-------------------------------TGLKNLLVAKNNLSEIPDLIFKIQTL 175

Query: 222 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
           TKL L  N I ++P EL    +L  L+L+ NK+K  P  I   L  L  L LD N + ++
Sbjct: 176 TKLILVENHITKVPKELGLLTNLTDLVLTYNKLKTLPKEI-GELWKLDYLVLDENMITEL 234

Query: 282 PSDGFKDIPMLQILDLSYNIASLPENP-PFSSLPHLQ--ELYLRRMQLREAPTDILRLQQ 338
           P D  + +  L+  +LS+N   +   P    +L  L+  EL L   ++      + +L Q
Sbjct: 235 P-DSIEHLTSLK--ELSFNDNRITRFPLSLGALTQLEILELSLSENRISRMHPALFKLTQ 291

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L IL+L+ N LQ IPE  +NL  L       N I  +PPE+  L+ +L+ L L GN +R 
Sbjct: 292 LTILNLNSNRLQKIPESIRNLEQLVTFSCGSNFIEDIPPEICELD-NLRQLVLFGNNIRH 350

Query: 399 I 399
           +
Sbjct: 351 V 351



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 163/362 (45%), Gaps = 42/362 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +  +  N L  L N+L    T L  L+ +KN L+ +P+ I  +  L +L L +N I  
Sbjct: 129 LKEFSLSQNNLVQLPNSL-PQLTGLKNLLVAKNNLSEIPDLIFKIQTLTKLILVENHITK 187

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  +    +L +  +  N L  LP E+G+L KL  L L  N + E       L  L  L
Sbjct: 188 VPKELGLLTNLTDLVLTYNKLKTLPKEIGELWKLDYLVLDENMITELPDSIEHLTSLKEL 247

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
             ++N ++  P  +G +T L  L L+ +  R  R        PAL K             
Sbjct: 248 SFNDNRITRFPLSLGALTQLEILELSLSENRISRMH------PALFKL------------ 289

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                       T+L++    L+L    L  IP  I    ++       N I+++PPE+ 
Sbjct: 290 ------------TQLTI----LNLNSNRLQKIPESIRNLEQLVTFSCGSNFIEDIPPEIC 333

Query: 240 SCASLQTLILSRNKIKD-WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
              +L+ L+L  N I+   P+  L  L+ L  L L  N L  +P    K +  L+ L L+
Sbjct: 334 ELDNLRQLVLFGNNIRHVCPE--LGGLTGLEVLSLSQNQLTDIPKQMLKTLTNLKELWLA 391

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
           +N + S+P +  +  L HL++L+L+  +L   P  I  L+ L +L L+ N +  +P+  K
Sbjct: 392 FNHLHSIPSSIGY--LKHLEQLWLQDNELESLPPQIGSLKNLNVLTLTGNRISELPDSLK 449

Query: 358 NL 359
            L
Sbjct: 450 RL 451



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 11/266 (4%)

Query: 125 SLSGLPPEI-------GKMTTLRKLLLTGNP-LRTLRSSLVNGPTPALLKYLRSRLPENE 176
            L   PPE+        + +  R + LTG   L+ L+  +++     +L  + S++P  E
Sbjct: 2   GLRQFPPELVTALSSFWEYSEARGVFLTGEGNLKYLQEVVLDHNNIQILPAVISQMPCLE 61

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
              AS      +  +    ++ K L L    L AI  EI     + +L L  N I E+P 
Sbjct: 62  SLNASANLIQTLPASVGNLISLKSLDLSKNGLVAIHEEISNLVNLEQLKLHENEITEVPE 121

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
            +S+  SL+   LS+N +   P++ L  L+ L  L +  N L ++P   FK   + +++ 
Sbjct: 122 CISALQSLKEFSLSQNNLVQLPNS-LPQLTGLKNLLVAKNNLSEIPDLIFKIQTLTKLIL 180

Query: 297 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
           +  +I  +P+      L +L +L L   +L+  P +I  L +L  L L +N +  +P+  
Sbjct: 181 VENHITKVPKE--LGLLTNLTDLVLTYNKLKTLPKEIGELWKLDYLVLDENMITELPDSI 238

Query: 357 KNLTSLTELDLSDNNISALPPELGLL 382
           ++LTSL EL  +DN I+  P  LG L
Sbjct: 239 EHLTSLKELSFNDNRITRFPLSLGAL 264


>gi|111307791|gb|AAI21268.1| LOC734027 protein [Xenopus (Silurana) tropicalis]
          Length = 635

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 188/405 (46%), Gaps = 72/405 (17%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTI 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKTM-----NRLTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  +    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEMVEDGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C SLQ L+LS N I+  P++I  +L  L+ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 GCESLQDLLLSSNAIQQLPESI-GALKKLTTLKVDENQLMYLP-DSIGGLTAIEDLDCSF 308

Query: 300 N-IASLPENPPFSSLPHLQE--------------------------LYLRRMQLREAPTD 332
           N I +LP     SS+ HL +                          L+L   +L   P +
Sbjct: 309 NEIEALP-----SSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVLFLHSNKLESLPEE 363

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +  +Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 364 MGDMQKLKVINLSDNRLRNLPFSFTRLQQLTAMWLSDNQSKPLIP 408



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 20/246 (8%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R LL+   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRNLLVRLVPCRCLRGE---EETVTSLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTILPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLP 314
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P  F  L 
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLDFLPANFGRLT 161

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
            LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N ++ 
Sbjct: 162 KLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTY 221

Query: 375 LPPELG 380
           +P  LG
Sbjct: 222 IPGFLG 227



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 40/257 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T +   ++   + L E     N L  +P  +G+L +L  LD+ +N I  
Sbjct: 186 LERLDLGSNEFTEVPE-VLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEM 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-- 118
           +   ISGC SL +  + +NA+  LP  +G L KL TL +  NQL  Y  ++     ++  
Sbjct: 245 VEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDENQLM-YLPDSIGGLTAIED 303

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LD S N +  LP  IG +  +R      N L                    ++LP     
Sbjct: 304 LDCSFNEIEALPSSIGHLIQIRTFAADHNFL--------------------TQLP----P 339

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E  T K   +            L L    L ++P E+ +  ++  ++LS N ++ LP   
Sbjct: 340 EIGTWKSATV------------LFLHSNKLESLPEEMGDMQKLKVINLSDNRLRNLPFSF 387

Query: 239 SSCASLQTLILSRNKIK 255
           +    L  + LS N+ K
Sbjct: 388 TRLQQLTAMWLSDNQSK 404


>gi|456888996|gb|EMF99923.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 347

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 170/338 (50%), Gaps = 21/338 (6%)

Query: 36  NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 95
           N + +++ + S +  LDL    + ++P  I    +L +  +  N L+A+P E+GKL  L 
Sbjct: 7   NNLEKSLQNPSEVRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEIGKLRNLE 66

Query: 96  TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 154
           TL L  N+LK    E  QL+ L  LDL  N LS LP  IGK+  L++L L+GN L  L  
Sbjct: 67  TLILAENRLKTIPNEIEQLQNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVL-- 124

Query: 155 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 214
            +       +L+  R++          TT    IT    L +    L+L    +  +P E
Sbjct: 125 PIAQLQNLEILELFRNQF---------TTLPKEITELKNLQI----LNLFENKIKILPKE 171

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           I +   +  LDL +N I+ L  +     +L++L L  NK++    A +  L SL  L L+
Sbjct: 172 ISQLSNLIWLDLGKNKIERLSLDFKGFQNLKSLNLLDNKLEHL-SADIAQLKSLEFLNLN 230

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
            N  + +P +  + +  LQ+L+L+ N + SLPE      L  L+ L++   +L   P  I
Sbjct: 231 YNRFKILPEEILQ-LENLQVLELTGNQLTSLPE--EIGKLEKLESLFVEGNRLTTLPNGI 287

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
             L+ L+IL L QN L ++PE  + L +L EL L ++N
Sbjct: 288 GHLRNLKILHLEQNRLTTLPEEMRALQNLKELYLQNSN 325



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 161/335 (48%), Gaps = 40/335 (11%)

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 134
           M ++  + L   L   S++  LDL S +L+    E    + L  L L  N L+ +P EIG
Sbjct: 1   MNHSTHNNLEKSLQNPSEVRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEIG 60

Query: 135 KMTTLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 191
           K+  L  L+L  N L+T+ +    L N  T  L +   S LP           E+L    
Sbjct: 61  KLRNLETLILAENRLKTIPNEIEQLQNLKTLDLYENKLSNLPN-----GIGKLENL---- 111

Query: 192 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 251
                  KEL+L G  LS +P  I +   +  L+L RN    LP E++   +LQ L L  
Sbjct: 112 -------KELNLSGNQLSVLP--IAQLQNLEILELFRNQFTTLPKEITELKNLQILNLFE 162

Query: 252 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILD-----LSYNIASL 304
           NKIK  P  I + LS+L  L L  N + ++  D  GF+++  L +LD     LS +IA L
Sbjct: 163 NKIKILPKEI-SQLSNLIWLDLGKNKIERLSLDFKGFQNLKSLNLLDNKLEHLSADIAQL 221

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
                      L+ L L   + +  P +IL+L+ L++L+L+ N L S+PE    L  L  
Sbjct: 222 K---------SLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEEIGKLEKLES 272

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L +  N ++ LP  +G L  +L+ L L+ N L ++
Sbjct: 273 LFVEGNRLTTLPNGIGHLR-NLKILHLEQNRLTTL 306



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 147/305 (48%), Gaps = 19/305 (6%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L +LI  +N L  +P+ IG L  L  L L +NR+ +IP+ I    +L    +  
Sbjct: 36  IGTFQNLEKLILFRNRLTAIPKEIGKLRNLETLILAENRLKTIPNEIEQLQNLKTLDLYE 95

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N LS LP  +GKL  L  L+L  NQL    +   Q  L +L+L  N  + LP EI ++  
Sbjct: 96  NKLSNLPNGIGKLENLKELNLSGNQLSVLPIAQLQ-NLEILELFRNQFTTLPKEITELKN 154

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L+ L L  N ++ L   +        L   ++++             + +++  +     
Sbjct: 155 LQILNLFENKIKILPKEISQLSNLIWLDLGKNKI-------------ERLSLDFKGFQNL 201

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           K L+L    L  + ++I +   +  L+L+ N  + LP E+    +LQ L L+ N++   P
Sbjct: 202 KSLNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLP 261

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
           + I   L  L  L ++ N L  +P +G   +  L+IL L  N + +LPE     +L +L+
Sbjct: 262 EEI-GKLEKLESLFVEGNRLTTLP-NGIGHLRNLKILHLEQNRLTTLPE--EMRALQNLK 317

Query: 318 ELYLR 322
           ELYL+
Sbjct: 318 ELYLQ 322



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 52/200 (26%)

Query: 220 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
           E+  LDLS   ++ LP E+ +  +L+ LIL RN++   P  I                  
Sbjct: 18  EVRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEI------------------ 59

Query: 280 QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
                                            L +L+ L L   +L+  P +I +LQ L
Sbjct: 60  -------------------------------GKLRNLETLILAENRLKTIPNEIEQLQNL 88

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           + LDL +N L ++P G   L +L EL+LS N +S LP  +  L+ +L+ L L  N   ++
Sbjct: 89  KTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVLP--IAQLQ-NLEILELFRNQFTTL 145

Query: 400 RRTILDRGTKAVLKYLKDKI 419
            + I +     +L   ++KI
Sbjct: 146 PKEITELKNLQILNLFENKI 165



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 36/69 (52%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +PE IG L +L  L +  NR+ ++P+ I    +L   ++  N L+ LP E+  L 
Sbjct: 255 NQLTSLPEEIGKLEKLESLFVEGNRLTTLPNGIGHLRNLKILHLEQNRLTTLPEEMRALQ 314

Query: 93  KLGTLDLHS 101
            L  L L +
Sbjct: 315 NLKELYLQN 323


>gi|418719131|ref|ZP_13278331.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|418738815|ref|ZP_13295208.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|421095752|ref|ZP_15556462.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410361414|gb|EKP12457.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410744284|gb|EKQ93025.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410745513|gb|EKQ98423.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 344

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 170/339 (50%), Gaps = 23/339 (6%)

Query: 36  NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 95
           N + +++ + S +  LDL    + ++P  I    +L +  +  N L+A+P E+GKL  L 
Sbjct: 7   NNLEKSLQNPSEVRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEIGKLRNLE 66

Query: 96  TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL-R 153
           TL L  N+LK    E  QL+ L  LDL  N LS LP  IGK+  L++L L+GN L  L  
Sbjct: 67  TLILAENRLKTIPNEIEQLQNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVLPI 126

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
           + L N     L +   + LP+             IT    L +    L+L    +  +P 
Sbjct: 127 AQLQNLEILELFRNQFTTLPKE------------ITELKNLQI----LNLFENKIKILPK 170

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           EI +   +  LDL +N I+ L  +     +L++L L  NK++    A +  L SL  L L
Sbjct: 171 EISQLSNLIWLDLGKNKIERLSLDFKGFQNLKSLNLLDNKLEHL-SADIAQLKSLEFLNL 229

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
           + N  + +P +  + +  LQ+L+L+ N + SLPE      L  L+ L++   +L   P  
Sbjct: 230 NYNRFKILPEEILQ-LENLQVLELTGNQLTSLPE--EIGKLEKLESLFVEGNRLTTLPNG 286

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           I  L+ L+IL L QN L ++PE  + L +L EL L ++N
Sbjct: 287 IGHLRNLKILHLEQNRLTTLPEEMRALQNLKELYLQNSN 325



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 161/335 (48%), Gaps = 40/335 (11%)

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 134
           M ++  + L   L   S++  LDL S +L+    E    + L  L L  N L+ +P EIG
Sbjct: 1   MNHSTHNNLEKSLQNPSEVRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEIG 60

Query: 135 KMTTLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 191
           K+  L  L+L  N L+T+ +    L N  T  L +   S LP           E+L    
Sbjct: 61  KLRNLETLILAENRLKTIPNEIEQLQNLKTLDLYENKLSNLPN-----GIGKLENL---- 111

Query: 192 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 251
                  KEL+L G  LS +P  I +   +  L+L RN    LP E++   +LQ L L  
Sbjct: 112 -------KELNLSGNQLSVLP--IAQLQNLEILELFRNQFTTLPKEITELKNLQILNLFE 162

Query: 252 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILD-----LSYNIASL 304
           NKIK  P  I + LS+L  L L  N + ++  D  GF+++  L +LD     LS +IA L
Sbjct: 163 NKIKILPKEI-SQLSNLIWLDLGKNKIERLSLDFKGFQNLKSLNLLDNKLEHLSADIAQL 221

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
                      L+ L L   + +  P +IL+L+ L++L+L+ N L S+PE    L  L  
Sbjct: 222 K---------SLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEEIGKLEKLES 272

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L +  N ++ LP  +G L  +L+ L L+ N L ++
Sbjct: 273 LFVEGNRLTTLPNGIGHLR-NLKILHLEQNRLTTL 306



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 147/305 (48%), Gaps = 19/305 (6%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L +LI  +N L  +P+ IG L  L  L L +NR+ +IP+ I    +L    +  
Sbjct: 36  IGTFQNLEKLILFRNRLTAIPKEIGKLRNLETLILAENRLKTIPNEIEQLQNLKTLDLYE 95

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N LS LP  +GKL  L  L+L  NQL    +   Q  L +L+L  N  + LP EI ++  
Sbjct: 96  NKLSNLPNGIGKLENLKELNLSGNQLSVLPIAQLQ-NLEILELFRNQFTTLPKEITELKN 154

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L+ L L  N ++ L   +        L   ++++             + +++  +     
Sbjct: 155 LQILNLFENKIKILPKEISQLSNLIWLDLGKNKI-------------ERLSLDFKGFQNL 201

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           K L+L    L  + ++I +   +  L+L+ N  + LP E+    +LQ L L+ N++   P
Sbjct: 202 KSLNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLP 261

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
           + I   L  L  L ++ N L  +P +G   +  L+IL L  N + +LPE     +L +L+
Sbjct: 262 EEI-GKLEKLESLFVEGNRLTTLP-NGIGHLRNLKILHLEQNRLTTLPE--EMRALQNLK 317

Query: 318 ELYLR 322
           ELYL+
Sbjct: 318 ELYLQ 322



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 52/200 (26%)

Query: 220 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
           E+  LDLS   ++ LP E+ +  +L+ LIL RN++   P  I                  
Sbjct: 18  EVRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEI------------------ 59

Query: 280 QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
                                            L +L+ L L   +L+  P +I +LQ L
Sbjct: 60  -------------------------------GKLRNLETLILAENRLKTIPNEIEQLQNL 88

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           + LDL +N L ++P G   L +L EL+LS N +S LP  +  L+ +L+ L L  N   ++
Sbjct: 89  KTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVLP--IAQLQ-NLEILELFRNQFTTL 145

Query: 400 RRTILDRGTKAVLKYLKDKI 419
            + I +     +L   ++KI
Sbjct: 146 PKEITELKNLQILNLFENKI 165



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 36/69 (52%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +PE IG L +L  L +  NR+ ++P+ I    +L   ++  N L+ LP E+  L 
Sbjct: 255 NQLTSLPEEIGKLEKLESLFVEGNRLTTLPNGIGHLRNLKILHLEQNRLTTLPEEMRALQ 314

Query: 93  KLGTLDLHS 101
            L  L L +
Sbjct: 315 NLKELYLQN 323


>gi|418726603|ref|ZP_13285214.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960513|gb|EKO24267.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 405

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 165/336 (49%), Gaps = 19/336 (5%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ I  L  L +L L  NR+ ++P  I    +L E  + +N L+ LP E+GKL  L  L
Sbjct: 63  LPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRL 122

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL+ N+L    +E  +L+ L  L LS+N L+ LP E GK+  L++L L+ N L TL    
Sbjct: 123 DLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTL---- 178

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                P  +  L++    N  S   TT    I     L      L+L    L+ +P EI 
Sbjct: 179 -----PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQT----LNLSDNQLTTLPIEIG 229

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           +   +  L+LS N +  LP E+    +L TL LS N++      I   L +L  L L +N
Sbjct: 230 KLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI-GKLQNLQDLNLHSN 288

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            L  + S   + +  LQ L LSYN +  LP+      L +LQEL L   QL   P +I +
Sbjct: 289 QLTTL-SKEIEQLKNLQTLSLSYNRLVILPK--EIGQLQNLQELNLWNNQLTALPIEIGQ 345

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           LQ L+ L L +N L + P+    L +L  L L  +N
Sbjct: 346 LQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 381



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 169/355 (47%), Gaps = 43/355 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL      ++P  I    +L + Y+ +N L  LP E+G+L  L  L+L SNQL     E
Sbjct: 53  LDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKE 112

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L  L  LDL +N L+ LP EIGK+  L+ L L+ N L TL                 
Sbjct: 113 IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL----------------- 155

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                      S   E+L           +EL+L    L+ +P EI +   +  L+L  N
Sbjct: 156 --------PRESGKLENL-----------QELNLSDNQLTTLPQEIGQLQNLQTLNLKSN 196

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  L  E+    +LQTL LS N++   P  I   L +L  L L +N L  +P +  K +
Sbjct: 197 QLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEI-GKLQNLHTLNLSDNQLTTLPIEIGK-L 254

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L  L+LS N + +L        L +LQ+L L   QL     +I +L+ L+ L LS N 
Sbjct: 255 QNLHTLNLSGNQLTTLS--IEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNR 312

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L  +P+    L +L EL+L +N ++ALP E+G L+ +LQ L L  N L +  + I
Sbjct: 313 LVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQ-NLQTLSLYKNRLMTFPKEI 366



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 136/304 (44%), Gaps = 53/304 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+L  L    I     L EL  S N L  +P+ IG L  L RLDL+ NR+  
Sbjct: 73  LQKLYLFDNRLKTLPKE-IGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 61  IPSSISGCCSLAEFY-----------------------MGNNALSALPAELGKLSKLGTL 97
           +P  I    +L   Y                       + +N L+ LP E+G+L  L TL
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTL 191

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           +L SNQL     E  QL+ L  L+LS+N L+ LP EIGK+  L  L L+ N L TL    
Sbjct: 192 NLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTL---- 247

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTT----------KEDLITMATRLSVTSKE------ 200
                P  +  L++    N      TT           +DL   + +L+  SKE      
Sbjct: 248 -----PIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKN 302

Query: 201 ---LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              LSL    L  +P EI +   + +L+L  N +  LP E+    +LQTL L +N++  +
Sbjct: 303 LQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTF 362

Query: 258 PDAI 261
           P  I
Sbjct: 363 PKEI 366



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 135/287 (47%), Gaps = 42/287 (14%)

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
           VLDLS  + + LP EI K+  L+KL L  N L+TL         P  +  L++       
Sbjct: 52  VLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTL---------PKEIGQLKNL------ 96

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                                +EL+L    L+ +P EI +   + +LDL  N +  LP E
Sbjct: 97  ---------------------QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIE 135

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           +    +LQTL LS N++   P      L +L  L L +N L  +P +    +  LQ L+L
Sbjct: 136 IGKLQNLQTLYLSSNQLTTLPRES-GKLENLQELNLSDNQLTTLPQE-IGQLQNLQTLNL 193

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
             N + +L +      L +LQ L L   QL   P +I +LQ L  L+LS N L ++P   
Sbjct: 194 KSNQLTTLFK--EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEI 251

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             L +L  L+LS N ++ L  E+G L+ +LQ L L  N L ++ + I
Sbjct: 252 GKLQNLHTLNLSGNQLTTLSIEIGKLQ-NLQDLNLHSNQLTTLSKEI 297



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 113/213 (53%), Gaps = 6/213 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L G N + +P EI +   + KL L  N ++ LP E+    +LQ L
Sbjct: 40  LTKALQNPMDVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            LS N++   P  I   L +L  L L +N L  +P +  K +  LQ L LS N + +LP 
Sbjct: 100 NLSSNQLTILPKEI-GKLENLQRLDLYDNRLTILPIEIGK-LQNLQTLYLSSNQLTTLPR 157

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +LQEL L   QL   P +I +LQ L+ L+L  N L ++ +  + L +L  L+
Sbjct: 158 ES--GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLN 215

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LSDN ++ LP E+G L+ +L  L L  N L ++
Sbjct: 216 LSDNQLTTLPIEIGKLQ-NLHTLNLSDNQLTTL 247



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 27/184 (14%)

Query: 220 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
           ++  LDLS  +   LP E+    +LQ L L  N++K  P  I   L +L  L L +N L 
Sbjct: 49  DVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEI-GQLKNLQELNLSSNQLT 107

Query: 280 QVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
            +P +                            L +LQ L L   +L   P +I +LQ L
Sbjct: 108 ILPKE-------------------------IGKLENLQRLDLYDNRLTILPIEIGKLQNL 142

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           + L LS N L ++P     L +L EL+LSDN ++ LP E+G L+ +LQ L L  N L ++
Sbjct: 143 QTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQ-NLQTLNLKSNQLTTL 201

Query: 400 RRTI 403
            + I
Sbjct: 202 FKEI 205



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 69/114 (60%), Gaps = 5/114 (4%)

Query: 290 PM-LQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           PM +++LDLS  N  +LP+      L +LQ+LYL   +L+  P +I +L+ L+ L+LS N
Sbjct: 47  PMDVRVLDLSGQNFTTLPK--EIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSN 104

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
            L  +P+    L +L  LDL DN ++ LP E+G L+ +LQ L L  N L ++ R
Sbjct: 105 QLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQ-NLQTLYLSSNQLTTLPR 157


>gi|328716327|ref|XP_003245897.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Acyrthosiphon
           pisum]
          Length = 559

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 193/420 (45%), Gaps = 43/420 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L + GNKL  L +  I   T L  L  S+N L  +P+++ +L+ L  LDL  N++  
Sbjct: 104 LTELYLYGNKLITLPSE-IGCLTNLQTLALSENSLTCLPDSLANLTSLKVLDLRHNKLTE 162

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  +    +L   ++  N +  +  ++ KL  L  L L  N++KE      +L ++   
Sbjct: 163 VPDVVYKLDTLTTLFLRFNRIRTVSDDISKLVNLVMLSLRENKIKELSSGIGKLDKVVTF 222

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+S+N L  LP EIG    L  L L  N L  +  ++ N      L    +RL    +S 
Sbjct: 223 DVSHNHLEHLPEEIGNCIQLSTLDLQHNELVDIPETIGNLTLLTRLGLRYNRLKNLPNSL 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPEL 238
           ++  + D             E ++EG  LS +P  +     E+  + L+RNS    P   
Sbjct: 283 SNCNRMD-------------EFNVEGNMLSCLPDGLLVNLKEMNSITLARNSFTAYPTGG 329

Query: 239 -SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
            +   ++ ++    NKI   P  I +  + L+ L + +N L  +P D      M+++   
Sbjct: 330 PAQFIAVDSINFEHNKIDKIPYGIFSKANYLTKLNMKDNALTSLPLDVGSWTNMVELNVA 389

Query: 298 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ------- 350
           +  I  LP++  +  L  L+ L L    L+  P  I  LQ+LR+LDL +N L+       
Sbjct: 390 TNMITKLPDDIQY--LQSLEVLILSNNLLKRLPATIGNLQKLRVLDLEENKLETLPQEIG 447

Query: 351 ----------------SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
                           S+P    +LT+L  L + +N +S LP E+G LE +L+AL ++ N
Sbjct: 448 YLRELQKLILQSNQLLSLPRAIGHLTNLAYLSVGENKLSTLPEEIGTLE-NLEALYINDN 506



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 175/397 (44%), Gaps = 38/397 (9%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           SK+ L  +P TI   ++L  L L+ N+++++PS I    +L    +  N+L+ LP  L  
Sbjct: 87  SKSGLTKVPITIRDATQLTELYLYGNKLITLPSEIGCLTNLQTLALSENSLTCLPDSLAN 146

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L+ L  LDL  N+L E      +L  L+ L L  N +  +  +I K+  L  L L  N +
Sbjct: 147 LTSLKVLDLRHNKLTEVPDVVYKLDTLTTLFLRFNRIRTVSDDISKLVNLVMLSLRENKI 206

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
           + L S +       L K +   +  N          + I ++T        L L+   L 
Sbjct: 207 KELSSGI-----GKLDKVVTFDVSHNHLEHLPEEIGNCIQLST--------LDLQHNELV 253

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            IP  I     +T+L L  N ++ LP  LS+C  +    +  N +   PD +L +L  ++
Sbjct: 254 DIPETIGNLTLLTRLGLRYNRLKNLPNSLSNCNRMDEFNVEGNMLSCLPDGLLVNLKEMN 313

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP---------------ENPPFSSL 313
            + L  N     P+ G      +  ++  +N I  +P               ++   +SL
Sbjct: 314 SITLARNSFTAYPTGGPAQFIAVDSINFEHNKIDKIPYGIFSKANYLTKLNMKDNALTSL 373

Query: 314 P-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
           P       ++ EL +    + + P DI  LQ L +L LS N L+ +P    NL  L  LD
Sbjct: 374 PLDVGSWTNMVELNVATNMITKLPDDIQYLQSLEVLILSNNLLKRLPATIGNLQKLRVLD 433

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L +N +  LP E+G L   LQ L L  N L S+ R I
Sbjct: 434 LEENKLETLPQEIGYLR-ELQKLILQSNQLLSLPRAI 469



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 174/414 (42%), Gaps = 85/414 (20%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
            DV  N L  L    I +   L+ L    N L  +PETIG+L+ L RL L  NR+ ++P+
Sbjct: 222 FDVSHNHLEHLPEE-IGNCIQLSTLDLQHNELVDIPETIGNLTLLTRLGLRYNRLKNLPN 280

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
           S+S C  + EF +  N LS LP  L               LKE         ++ + L+ 
Sbjct: 281 SLSNCNRMDEFNVEGNMLSCLPDGLLV------------NLKE---------MNSITLAR 319

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           NS +  P              TG P + +    +N     +      ++P    S+A+  
Sbjct: 320 NSFTAYP--------------TGGPAQFIAVDSINFEHNKI-----DKIPYGIFSKAN-- 358

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
                   T+L++    L+       ++P ++     + +L+++ N I +LP ++    S
Sbjct: 359 ------YLTKLNMKDNALT-------SLPLDVGSWTNMVELNVATNMITKLPDDIQYLQS 405

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 303
           L+ LILS N +K  P A + +L  L  L L+ N L  +P +                   
Sbjct: 406 LEVLILSNNLLKRLP-ATIGNLQKLRVLDLEENKLETLPQE------------------- 445

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
                    L  LQ+L L+  QL   P  I  L  L  L + +N L ++PE    L +L 
Sbjct: 446 ------IGYLRELQKLILQSNQLLSLPRAIGHLTNLAYLSVGENKLSTLPEEIGTLENLE 499

Query: 364 ELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
            L ++DN ++  LP EL L    LQ L ++  PL  +   +   G   V+ YLK
Sbjct: 500 ALYINDNQSLHHLPFELALCS-KLQLLGIENCPLSQLGDAV-KGGPSLVMTYLK 551



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 122/267 (45%), Gaps = 21/267 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD---LHQNR 57
           M + +VEGN L+ L + L+ +   +  +  ++N     P   G  ++ I +D      N+
Sbjct: 288 MDEFNVEGNMLSCLPDGLLVNLKEMNSITLARNSFTAYP--TGGPAQFIAVDSINFEHNK 345

Query: 58  ILSIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 115
           I  IP  I S    L +  M +NAL++LP ++G  + +  L++ +N + +   +   L+ 
Sbjct: 346 IDKIPYGIFSKANYLTKLNMKDNALTSLPLDVGSWTNMVELNVATNMITKLPDDIQYLQS 405

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L VL LSNN L  LP  IG +  LR L L  N L TL         P  + YLR      
Sbjct: 406 LEVLILSNNLLKRLPATIGNLQKLRVLDLEENKLETL---------PQEIGYLRELQKLI 456

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQEL 234
             S    +    I   T L+     LS+    LS +P EI     +  L ++ N S+  L
Sbjct: 457 LQSNQLLSLPRAIGHLTNLAY----LSVGENKLSTLPEEIGTLENLEALYINDNQSLHHL 512

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAI 261
           P EL+ C+ LQ L +    +    DA+
Sbjct: 513 PFELALCSKLQLLGIENCPLSQLGDAV 539



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 29/168 (17%)

Query: 13  VLSNNL-------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
           +LSNNL       I +   L  L   +N L  +P+ IG L  L +L L  N++LS+P +I
Sbjct: 410 ILSNNLLKRLPATIGNLQKLRVLDLEENKLETLPQEIGYLRELQKLILQSNQLLSLPRAI 469

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 125
               +LA   +G N LS LP E+G L  L  L ++ NQ                     S
Sbjct: 470 GHLTNLAYLSVGENKLSTLPEEIGTLENLEALYINDNQ---------------------S 508

Query: 126 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L  LP E+   + L+ L +   PL  L  ++  GP+  ++ YL+   P
Sbjct: 509 LHHLPFELALCSKLQLLGIENCPLSQLGDAVKGGPS-LVMTYLKVNGP 555


>gi|421088197|ref|ZP_15549025.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003182|gb|EKO53628.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 354

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 147/294 (50%), Gaps = 20/294 (6%)

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV---NGPTPALLKYLRSRLPE 174
           VLDLS  +L+  P EIG+   L+KL L+GN L  L   +V   N    +L     + LP+
Sbjct: 45  VLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNLPK 104

Query: 175 NEDSEASTTKEDLITMATRLSVTSKEL----SLEGMNLS-----AIPSEIWEAGEITKLD 225
             +   S    DL     +L    KE+    +LE +NLS     A+P EI +   +  L 
Sbjct: 105 EIEQLKSLKNLDL--FRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILK 162

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           L  N I  LP E+     L+ LIL  N+ K+ P   L  L +L  L L  N L  +P + 
Sbjct: 163 LDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEAL-QLKNLQKLNLSENQLVSIPKEI 221

Query: 286 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
            + +  L+ L L +N I  LP       L +LQELYL   Q    P +I +L+ LR L L
Sbjct: 222 LQ-LQNLRDLVLDHNQITILP--TEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSL 278

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
             N L ++P+    L +L  L+L +N ++ LP E+G L+ +LQ L LD NPL S
Sbjct: 279 KNNRLSTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQLK-NLQRLELDSNPLSS 331



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 24/283 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+ GN+LTVLS   I     L EL    N L  +P+ I  L  L  LDL +N++++
Sbjct: 66  LQKLDLSGNELTVLSKE-IVQLQNLQELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLMT 124

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL----KEYCVEACQLRL 116
           +P  +    +L +  +  N L+A+P E+G+L  L  L L  NQ+    KE  +E  Q  L
Sbjct: 125 VPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVSLPKE--IEGLQ-EL 181

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL-LKYLRSRLPEN 175
             L L NN    +P E  ++  L+KL L+ N        LV+ P   L L+ LR  + ++
Sbjct: 182 KELILENNRFKNVPGEALQLKNLQKLNLSEN-------QLVSIPKEILQLQNLRDLVLDH 234

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
             ++ +    +++ +        +EL L     +++P EI +   +  L L  N +  LP
Sbjct: 235 --NQITILPTEVLQLQNL-----QELYLSENQFTSLPKEIDKLKNLRWLSLKNNRLSTLP 287

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
            E+    +LQ L L  N++ + P  I   L +L  L+LD+NPL
Sbjct: 288 KEIGQLKNLQRLELGNNQLTNLPKEI-GQLKNLQRLELDSNPL 329



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 142/319 (44%), Gaps = 42/319 (13%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L   P+ IG    L +LDL  N +  +   I    +L E  + +N L+ LP E+ +L  L
Sbjct: 53  LTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNLPKEIEQLKSL 112

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDL  NQL     E   L+ L  L+LS N L+ +P EIG++  L+ L L  N + +L 
Sbjct: 113 KNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVSL- 171

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
                   P  ++ L+                             KEL LE      +P 
Sbjct: 172 --------PKEIEGLQEL---------------------------KELILENNRFKNVPG 196

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           E  +   + KL+LS N +  +P E+    +L+ L+L  N+I   P  +L  L +L  L L
Sbjct: 197 EALQLKNLQKLNLSENQLVSIPKEILQLQNLRDLVLDHNQITILPTEVL-QLQNLQELYL 255

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
             N    +P +    +  L+ L L  N +++LP+      L +LQ L L   QL   P +
Sbjct: 256 SENQFTSLPKE-IDKLKNLRWLSLKNNRLSTLPK--EIGQLKNLQRLELGNNQLTNLPKE 312

Query: 333 ILRLQQLRILDLSQNSLQS 351
           I +L+ L+ L+L  N L S
Sbjct: 313 IGQLKNLQRLELDSNPLSS 331



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 115/239 (48%), Gaps = 27/239 (11%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A + S   + L L   NL++ P EI +   + KLDLS N +  L  E+    +LQ L
Sbjct: 33  LTKALQNSSNVRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQEL 92

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-------------------KD 288
            L  NK+ + P  I   L SL  L L  N L  VP +                     K+
Sbjct: 93  SLHSNKLTNLPKEI-EQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKE 151

Query: 289 IPM---LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
           I     LQIL L +N I SLP+      L  L+EL L   + +  P + L+L+ L+ L+L
Sbjct: 152 IGQLKNLQILKLDHNQIVSLPK--EIEGLQELKELILENNRFKNVPGEALQLKNLQKLNL 209

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           S+N L SIP+    L +L +L L  N I+ LP E+  L+ +LQ L L  N   S+ + I
Sbjct: 210 SENQLVSIPKEILQLQNLRDLVLDHNQITILPTEVLQLQ-NLQELYLSENQFTSLPKEI 267


>gi|268551887|ref|XP_002633925.1| C. briggsae CBR-SOC-2 protein [Caenorhabditis briggsae]
 gi|261277879|sp|A8XWW4.1|SHOC2_CAEBR RecName: Full=Leucine-rich repeat protein soc-2; AltName:
           Full=Suppressor of Clr protein 2; AltName:
           Full=Suppressor of activated let-60 Ras protein 8
          Length = 559

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 214/466 (45%), Gaps = 71/466 (15%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRL-----------------------DLHQ 55
           I   T LTEL   KN L  +P  IG L  L +L                       DL  
Sbjct: 92  IKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALSSLPDSLSSLESLETLDLRH 151

Query: 56  NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE--------- 106
           N++  +P+ I    SL   ++  N + A+  ++G L KL  LD+  N+++E         
Sbjct: 152 NKLTEVPAVIYKITSLETLWLRYNRIVAVDEQIGNLQKLKMLDVRENKIRELPSAIGKLS 211

Query: 107 ---YC-------------VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
               C             +  C   L+ LDL +N LS LP  IGK+T L ++ +  N +R
Sbjct: 212 SLVVCLVSYNHLTRVPEEIGECH-ALTQLDLQHNDLSELPYSIGKLTNLVRIGIRYNKIR 270

Query: 151 TLRSSLVNGPTPALLKYLRSR-----LPEN------EDSEASTTKEDLITM---ATRLSV 196
            + S L +     L +++        LP N      +    + ++ +L        +  V
Sbjct: 271 CIPSELES--CQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFV 328

Query: 197 TSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
            +  +++E   +S IP  I+ +A  +TKL+L  N +  LP ++ S  S+  L LS N++K
Sbjct: 329 PTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLK 388

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 315
             P+ I   L +L  L L NN L+++P+       + ++      + ++P    F  L H
Sbjct: 389 VLPEDI-EKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEENELETVPTEIGF--LQH 445

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISA 374
           L +L+++  ++   P  I  L  L+ L L +N+L +IPE   +L SL  L L+DN ++  
Sbjct: 446 LTKLWVQSNKIVTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHN 505

Query: 375 LPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           LP EL L + SL+ + ++ +PL  I   I   G   V++YLK + P
Sbjct: 506 LPFELALCQ-SLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGP 550



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 110/202 (54%), Gaps = 6/202 (2%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           + L L  + +++IPS I E  ++T+L L +N +  LP E+    +L+ L LS N +    
Sbjct: 76  QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALSSL- 134

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
              L+SL SL  L L +N L +VP+  +K I  L+ L L YN I ++ E     +L  L+
Sbjct: 135 PDSLSSLESLETLDLRHNKLTEVPAVIYK-ITSLETLWLRYNRIVAVDEQ--IGNLQKLK 191

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++RE P+ I +L  L +  +S N L  +PE      +LT+LDL  N++S LP 
Sbjct: 192 MLDVRENKIRELPSAIGKLSSLVVCLVSYNHLTRVPEEIGECHALTQLDLQHNDLSELPY 251

Query: 378 ELGLLEPSLQALRLDGNPLRSI 399
            +G L  +L  + +  N +R I
Sbjct: 252 SIGKLT-NLVRIGIRYNKIRCI 272



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 113/284 (39%), Gaps = 60/284 (21%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E N+++ +   + +  T LT+L   +N L  +P  +GS + +  L+L  N++  +P 
Sbjct: 333 INMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPE 392

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I    +L    + NN L  LP ++G L K                      L  LDL  
Sbjct: 393 DIEKLVNLEILVLSNNQLKKLPNQIGNLKK----------------------LRELDLEE 430

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N L  +P EIG +  L KL +  N + TL  S+ N     L      RL EN        
Sbjct: 431 NELETVPTEIGFLQHLTKLWVQSNKIVTLPRSIGN-----LCSLQDLRLGEN-------- 477

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCA 242
                                  NL+AIP EI     +  L L+ N S+  LP EL+ C 
Sbjct: 478 -----------------------NLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQ 514

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLD-NNPLRQVPSDG 285
           SL+ + +  + +   P  I     SL    L    P R V   G
Sbjct: 515 SLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGPYRGVVMTG 558


>gi|359683883|ref|ZP_09253884.1| lipoprotein, partial [Leptospira santarosai str. 2000030832]
          Length = 332

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 153/355 (43%), Gaps = 64/355 (18%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L L  N++ ++P  I    +L +  + NN L  LP E+G L  L +L+L +N+L     E
Sbjct: 2   LRLAYNQLTTLPEEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKE 61

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
              L +L  L L+NN L+ LP EIGK+  L  L LT N LR L         P  +  L+
Sbjct: 62  IGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLTNNQLRIL---------PQEIGKLQ 112

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           +                            KEL LE   L + P EI     + +L L  N
Sbjct: 113 N---------------------------LKELILENNRLESFPKEIGTLSNLQRLHLEYN 145

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
               LP E+ +   L  L L  N++   P  I   L  L  L L NN L  +P +     
Sbjct: 146 RFTTLPKEIGTLHRLPWLNLEHNQLTTLPQEI-GRLERLEWLNLYNNRLATLPKE----- 199

Query: 290 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
                                 +L  LQ LYL   QL   P +I +LQ L+ LDLS N L
Sbjct: 200 --------------------IGTLQKLQHLYLANNQLATLPQEIGQLQNLKDLDLSDNQL 239

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
            ++PE    L  L  L L +N +  LP E+G L+ +L+ L L GNP  +  + I+
Sbjct: 240 VTLPEEIGTLQRLEWLSLKNNQLRTLPQEIGQLQ-NLKDLDLSGNPFTTFPQEIV 293



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 147/309 (47%), Gaps = 27/309 (8%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N+LT L    I     L +L    N L  +P+ IG+L  L  L+L  NR++++P  I   
Sbjct: 7   NQLTTLPEE-IGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGTL 65

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 127
             L   Y+ NN L+ LP E+GKL +L  L L +NQL+    E  +L+ L  L L NN L 
Sbjct: 66  QKLEWLYLTNNQLATLPKEIGKLQRLEWLGLTNNQLRILPQEIGKLQNLKELILENNRLE 125

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NEDSEASTTKED 186
             P EIG ++ L++L L  N   TL         P  +  L  RLP  N +    TT   
Sbjct: 126 SFPKEIGTLSNLQRLHLEYNRFTTL---------PKEIGTLH-RLPWLNLEHNQLTTLPQ 175

Query: 187 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
            I    RL      L+L    L+ +P EI    ++  L L+ N +  LP E+    +L+ 
Sbjct: 176 EIGRLERLEW----LNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPQEIGQLQNLKD 231

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 306
           L LS N++   P+ I T L  L  L L NN LR +P +    +  L+ LDLS N      
Sbjct: 232 LDLSDNQLVTLPEEIGT-LQRLEWLSLKNNQLRTLPQE-IGQLQNLKDLDLSGN------ 283

Query: 307 NPPFSSLPH 315
             PF++ P 
Sbjct: 284 --PFTTFPQ 290



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 82/158 (51%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +E N+ T L    I +   L  L    N L  +P+ IG L RL  L+L+ NR+ +
Sbjct: 137 LQRLHLEYNRFTTLPKE-IGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLAT 195

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I     L   Y+ NN L+ LP E+G+L  L  LDL  NQL     E   L RL  L
Sbjct: 196 LPKEIGTLQKLQHLYLANNQLATLPQEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWL 255

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L NN L  LP EIG++  L+ L L+GNP  T    +V
Sbjct: 256 SLKNNQLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEIV 293


>gi|386392500|ref|ZP_10077281.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
 gi|385733378|gb|EIG53576.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
          Length = 1279

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 190/405 (46%), Gaps = 21/405 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++ G  L  L    I     L  L  S+  L  +P +I  LS L RLD+  +  ++
Sbjct: 84  LETLNISGTSLKKLPE-FIGELVGLQSLYVSRTALTTLPNSIRQLSNLRRLDISFSGFIN 142

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI    +L +  + +  L+ LPA +G+L++L  LD+ S  L        QL  L  L
Sbjct: 143 LPDSIGEMPNLQDLNVSSTDLTTLPASIGQLTRLQHLDVSSTGLTSLPDSIGQLSMLKHL 202

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+S   L+ LP  IG++T L+ L ++   L TL         P  +  L S    +    
Sbjct: 203 DVSGTDLATLPDSIGQLTNLKHLDVSSTSLNTL---------PDSIGQLSSLQHLDVSGT 253

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +  T  D I   + L    + L + G  L  +P  I +   +  LD+S  SI  LP  + 
Sbjct: 254 SLQTLPDSIGQLSSL----QHLDVSGTRLQILPDSIVQLSSLQHLDVSDTSINNLPDSIG 309

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS- 298
             ++LQ L +S   +   PD+I   LS+L  L++ +  L  +P   ++ +  LQ L+LS 
Sbjct: 310 QLSNLQHLDVSDTSLNTLPDSI-GQLSNLQHLEVSDASLNTLPETIWR-LSSLQDLNLSG 367

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
             + +LPE      L  LQ+L L    L   P  I +L  L+ L+LS   L ++PE    
Sbjct: 368 TGLTTLPE--ALCQLSSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTLPEAICQ 425

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L SL +L+LS   ++ LP  +  L  SLQ L L G  L ++   I
Sbjct: 426 LNSLQDLNLSGTGLTTLPEAICQLN-SLQDLNLSGTGLTTLPGAI 469



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 199/419 (47%), Gaps = 26/419 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LDV    L  L ++ I   + L  L  S   L  +P++IG LS L  LD+   R+  
Sbjct: 222 LKHLDVSSTSLNTLPDS-IGQLSSLQHLDVSGTSLQTLPDSIGQLSSLQHLDVSGTRLQI 280

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P SI    SL    + + +++ LP  +G+LS L  LD+    L        QL  L  L
Sbjct: 281 LPDSIVQLSSLQHLDVSDTSINNLPDSIGQLSNLQHLDVSDTSLNTLPDSIGQLSNLQHL 340

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN------------GPT--PALL 165
           ++S+ SL+ LP  I ++++L+ L L+G  L TL  +L              G T  P  +
Sbjct: 341 EVSDASLNTLPETIWRLSSLQDLNLSGTGLTTLPEALCQLSSLQDLNLSGTGLTTLPEAI 400

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
             L S    N      TT  + I     L    ++L+L G  L+ +P  I +   +  L+
Sbjct: 401 CQLNSLQDLNLSGTGLTTLPEAICQLNSL----QDLNLSGTGLTTLPEAICQLNSLQDLN 456

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           LS   +  LP  +    SLQ L LS   +   P+ I   L++L+ L   N  L  +P D 
Sbjct: 457 LSGTGLTTLPGAICQLNSLQDLNLSGTGLTTLPETI-GQLTNLNNLMASNTALTTLP-DT 514

Query: 286 FKDIPMLQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
              +  L+ L++S  ++ +LP++     L HLQ L++    L   P  I +L  L IL++
Sbjct: 515 LGQLSNLEFLNISNTSLVTLPDS--IGLLSHLQILFVSDTDLVTLPESIGQLTSLEILNV 572

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           S   L S+PE    LT+L  L++S+ ++++LP  +G L+ SL  L +    L S+  +I
Sbjct: 573 SNTGLTSLPESIGRLTNLQILNVSNTDLTSLPESIGQLK-SLIKLNVSNTGLTSLPMSI 630



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 185/385 (48%), Gaps = 24/385 (6%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T L  L  + N +  +P+ +  L+ L  L++    +  +P  I     L   Y+   AL+
Sbjct: 59  TNLKSLTIASNPITILPKWLECLTGLETLNISGTSLKKLPEFIGELVGLQSLYVSRTALT 118

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 141
            LP  + +LS L  LD+  +          ++  L  L++S+  L+ LP  IG++T L+ 
Sbjct: 119 TLPNSIRQLSNLRRLDISFSGFINLPDSIGEMPNLQDLNVSSTDLTTLPASIGQLTRLQH 178

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--K 199
           L ++   L +L  S+      ++LK+L              +  DL T+   +   +  K
Sbjct: 179 LDVSSTGLTSLPDSI---GQLSMLKHL------------DVSGTDLATLPDSIGQLTNLK 223

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
            L +   +L+ +P  I +   +  LD+S  S+Q LP  +   +SLQ L +S  +++  PD
Sbjct: 224 HLDVSSTSLNTLPDSIGQLSSLQHLDVSGTSLQTLPDSIGQLSSLQHLDVSGTRLQILPD 283

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFSSLPHLQE 318
           +I+  LSSL  L + +  +  +P D    +  LQ LD+S  ++ +LP++     L +LQ 
Sbjct: 284 SIV-QLSSLQHLDVSDTSINNLP-DSIGQLSNLQHLDVSDTSLNTLPDS--IGQLSNLQH 339

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L +    L   P  I RL  L+ L+LS   L ++PE    L+SL +L+LS   ++ LP  
Sbjct: 340 LEVSDASLNTLPETIWRLSSLQDLNLSGTGLTTLPEALCQLSSLQDLNLSGTGLTTLPEA 399

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTI 403
           +  L  SLQ L L G  L ++   I
Sbjct: 400 ICQLN-SLQDLNLSGTGLTTLPEAI 423



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 157/335 (46%), Gaps = 39/335 (11%)

Query: 103 QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL------ 156
           +++E+   A Q + S LDLS   LS LP ++  +T L+ L +  NP+  L   L      
Sbjct: 25  KIREFLTLAKQEKWSCLDLSALELSFLPLDLPPLTNLKSLTIASNPITILPKWLECLTGL 84

Query: 157 ----VNGPT----PALLKYLRSRLPENEDSEASTTKEDLITMAT---RLSVTS------- 198
               ++G +    P  +  L           A TT  + I   +   RL ++        
Sbjct: 85  ETLNISGTSLKKLPEFIGELVGLQSLYVSRTALTTLPNSIRQLSNLRRLDISFSGFINLP 144

Query: 199 ---------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
                    ++L++   +L+ +P+ I +   +  LD+S   +  LP  +   + L+ L +
Sbjct: 145 DSIGEMPNLQDLNVSSTDLTTLPASIGQLTRLQHLDVSSTGLTSLPDSIGQLSMLKHLDV 204

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENP 308
           S   +   PD+I   L++L  L + +  L  +P D    +  LQ LD+S  ++ +LP++ 
Sbjct: 205 SGTDLATLPDSI-GQLTNLKHLDVSSTSLNTLP-DSIGQLSSLQHLDVSGTSLQTLPDS- 261

Query: 309 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 368
               L  LQ L +   +L+  P  I++L  L+ LD+S  S+ ++P+    L++L  LD+S
Sbjct: 262 -IGQLSSLQHLDVSGTRLQILPDSIVQLSSLQHLDVSDTSINNLPDSIGQLSNLQHLDVS 320

Query: 369 DNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           D +++ LP  +G L  +LQ L +    L ++  TI
Sbjct: 321 DTSLNTLPDSIGQLS-NLQHLEVSDASLNTLPETI 354


>gi|292621483|ref|XP_002664664.1| PREDICTED: insulin-like growth factor-binding protein complex acid
           labile subunit-like [Danio rerio]
          Length = 673

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 208/422 (49%), Gaps = 33/422 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLIRLDLHQNRIL 59
           ++KL +  NKL  + N      T L  L    N L G+P  +    S L  L L +N I 
Sbjct: 188 LAKLYLSKNKLKSVGNGSFKGATGLNHLDLGLNGLAGIPTIVLQETSNLTSLYLQKNDIT 247

Query: 60  SIPSSI-SGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLK---EYCVEACQL 114
           SIP ++ S   SL    +  N L ++       LS+L  LDL  NQL+   ++  E    
Sbjct: 248 SIPDNVFSEILSLKHLDLSYNGLVSISNGSFRSLSQLVYLDLSFNQLQTLTQHVFEDLG- 306

Query: 115 RLSVLDLSNNSLSGLPPEIGK-MTTLRKLLLTGN-----------PLRTLRS-SLVNGPT 161
           +L  L+L +N L+ LP  + K +T L++L L  N           PL  L+   L N   
Sbjct: 307 KLENLNLYHNKLTSLPNNMFKNLTMLKELQLDSNNISVIPPDLFHPLSALKDLQLDNNHI 366

Query: 162 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS-KELSLEGMNLSAIPSEIWEA-G 219
             L  +   +L + +  + S+   DL  +   L   + KEL+LE  ++S I    ++   
Sbjct: 367 SKLHSHTFKKLRQLKQLDISS--NDLTKIPNHLFHKNLKELNLENNHISFISKFSFKNLH 424

Query: 220 EITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
            +  L LS N++ +L  EL ++   L+ L+L+ N+I+  P      L +L  L L NN +
Sbjct: 425 RLQSLKLSHNNLSKLYRELLTNLTRLRELLLNENQIETIPVGFFKGLENLRVLDLSNNKM 484

Query: 279 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-L 336
             +  D F D+  L+ LDLS+N + +LPE+  F+SL +L +L+L+  +LR  P+ +   L
Sbjct: 485 HFILPDAFNDLSALKDLDLSFNFLHNLPED-IFASLRNLTKLHLQNNKLRYLPSRLFSAL 543

Query: 337 QQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEP--SLQALRLDG 393
             L  L L +N +Q I P  F+ L  L ELD+  N + ++  E G L P   L+ + LDG
Sbjct: 544 VGLEELHLDRNYIQRIHPTQFEGLVKLHELDMKSNQLRSM--EDGTLMPLRKLKRIHLDG 601

Query: 394 NP 395
           NP
Sbjct: 602 NP 603



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 191/415 (46%), Gaps = 35/415 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG-SLSRLIRLDLHQNRIL 59
           +  L++  N++  LS  ++     LT+L    N+++ +   +  + + L +L L +N++ 
Sbjct: 140 LQTLNLNINQILSLSYGVLEGPLALTDLQLRDNMIDMIEMNVFENCTYLAKLYLSKNKLK 199

Query: 60  SIPS-SISGCCSLAEFYMGNNALSALPA-ELGKLSKLGTLDLHSNQLKEY--CVEACQLR 115
           S+ + S  G   L    +G N L+ +P   L + S L +L L  N +      V +  L 
Sbjct: 200 SVGNGSFKGATGLNHLDLGLNGLAGIPTIVLQETSNLTSLYLQKNDITSIPDNVFSEILS 259

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLL---LTGNPLRTLRSSLVN--GPTPALLKYLR- 169
           L  LDLS N L  +    G   +L +L+   L+ N L+TL   +    G    L  Y   
Sbjct: 260 LKHLDLSYNGLVSISN--GSFRSLSQLVYLDLSFNQLQTLTQHVFEDLGKLENLNLYHNK 317

Query: 170 -SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE-AGEITKLDLS 227
            + LP N              M   L++  KEL L+  N+S IP +++     +  L L 
Sbjct: 318 LTSLPNN--------------MFKNLTML-KELQLDSNNISVIPPDLFHPLSALKDLQLD 362

Query: 228 RNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
            N I +L          L+ L +S N +   P+ +     +L  L L+NN +  +    F
Sbjct: 363 NNHISKLHSHTFKKLRQLKQLDISSNDLTKIPNHLFHK--NLKELNLENNHISFISKFSF 420

Query: 287 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLS 345
           K++  LQ L LS+N  S       ++L  L+EL L   Q+   P    + L+ LR+LDLS
Sbjct: 421 KNLHRLQSLKLSHNNLSKLYRELLTNLTRLRELLLNENQIETIPVGFFKGLENLRVLDLS 480

Query: 346 QNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            N +  I P+ F +L++L +LDLS N +  LP ++     +L  L L  N LR +
Sbjct: 481 NNKMHFILPDAFNDLSALKDLDLSFNFLHNLPEDIFASLRNLTKLHLQNNKLRYL 535



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 159/381 (41%), Gaps = 66/381 (17%)

Query: 27  ELIASKNLLNGMPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSAL- 84
              A++N +  +P    +   L  LDL +N   LS+ ++      L   ++G N L AL 
Sbjct: 49  HFYATRNKIQALPNE--TFHELRVLDLTKNVFNLSLNTNWQSVRGLTHLHLGGNRLRALT 106

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE-IGKMTTLRKLL 143
           P +   L                      L L VLDLSNN++  LP   +  +  L+ L 
Sbjct: 107 PRQFEGL----------------------LNLQVLDLSNNAIKSLPQMFLYGLINLQTLN 144

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N + +L   ++ GP                                 L++T  +L L
Sbjct: 145 LNINQILSLSYGVLEGP---------------------------------LALT--DLQL 169

Query: 204 EGMNLSAIPSEIWE-AGEITKLDLSRNSIQELP-PELSSCASLQTLILSRNKIKDWPDAI 261
               +  I   ++E    + KL LS+N ++ +          L  L L  N +   P  +
Sbjct: 170 RDNMIDMIEMNVFENCTYLAKLYLSKNKLKSVGNGSFKGATGLNHLDLGLNGLAGIPTIV 229

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYL 321
           L   S+L+ L L  N +  +P + F +I  L+ LDLSYN      N  F SL  L  L L
Sbjct: 230 LQETSNLTSLYLQKNDITSIPDNVFSEILSLKHLDLSYNGLVSISNGSFRSLSQLVYLDL 289

Query: 322 RRMQLREAPTDILR-LQQLRILDLSQNSLQSIPEG-FKNLTSLTELDLSDNNISALPPEL 379
              QL+     +   L +L  L+L  N L S+P   FKNLT L EL L  NNIS +PP+L
Sbjct: 290 SFNQLQTLTQHVFEDLGKLENLNLYHNKLTSLPNNMFKNLTMLKELQLDSNNISVIPPDL 349

Query: 380 GLLEPSLQALRLDGNPLRSIR 400
                +L+ L+LD N +  + 
Sbjct: 350 FHPLSALKDLQLDNNHISKLH 370



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 193/417 (46%), Gaps = 34/417 (8%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLN-GMPETIGSLSRLIRLDLHQNRILSI-PSSIS 66
           NK+  L N    ++  L  L  +KN+ N  +     S+  L  L L  NR+ ++ P    
Sbjct: 55  NKIQALPN---ETFHELRVLDLTKNVFNLSLNTNWQSVRGLTHLHLGGNRLRALTPRQFE 111

Query: 67  GCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKE--YCVEACQLRLSVLDLSN 123
           G  +L    + NNA+ +LP   L  L  L TL+L+ NQ+    Y V    L L+ L L +
Sbjct: 112 GLLNLQVLDLSNNAIKSLPQMFLYGLINLQTLNLNINQILSLSYGVLEGPLALTDLQLRD 171

Query: 124 NSLSGLPPEIGK-MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR------SRLPENE 176
           N +  +   + +  T L KL L+ N L+++ +    G T   L +L       + +P   
Sbjct: 172 NMIDMIEMNVFENCTYLAKLYLSKNKLKSVGNGSFKGATG--LNHLDLGLNGLAGIPTIV 229

Query: 177 DSEAST------TKEDLITMATRLSVTSKELSLEGMNLS-----AIPSEIWEA-GEITKL 224
             E S        K D+ ++    +V S+ LSL+ ++LS     +I +  + +  ++  L
Sbjct: 230 LQETSNLTSLYLQKNDITSIPD--NVFSEILSLKHLDLSYNGLVSISNGSFRSLSQLVYL 287

Query: 225 DLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           DLS N +Q L          L+ L L  NK+   P+ +  +L+ L  L+LD+N +  +P 
Sbjct: 288 DLSFNQLQTLTQHVFEDLGKLENLNLYHNKLTSLPNNMFKNLTMLKELQLDSNNISVIPP 347

Query: 284 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
           D F  +  L+ L L  N  S   +  F  L  L++L +    L + P  +   + L+ L+
Sbjct: 348 DLFHPLSALKDLQLDNNHISKLHSHTFKKLRQLKQLDISSNDLTKIPNHLFH-KNLKELN 406

Query: 344 LSQNSLQSIPE-GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L  N +  I +  FKNL  L  L LS NN+S L  EL      L+ L L+ N + +I
Sbjct: 407 LENNHISFISKFSFKNLHRLQSLKLSHNNLSKLYRELLTNLTRLRELLLNENQIETI 463


>gi|421119254|ref|ZP_15579578.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347884|gb|EKO98735.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 428

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 183/372 (49%), Gaps = 51/372 (13%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ I  L  L +L L  NR+ ++P  I    +L E  + +N L+ LP E+GKL  L  L
Sbjct: 63  LPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRL 122

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL+ N+L    +E  +L+ L  L LS+N L+ LP E GK+  L++L L+ N L TL    
Sbjct: 123 DLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTL---- 178

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                P  +  L++                            + L+L+   L+ +  EI 
Sbjct: 179 -----PQEIGQLQNL---------------------------QTLNLKSNQLTTLFKEIE 206

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL----TSLSSLSCLK 272
           +   +  L+LS N +  LP E+    +L TL LS N++     AIL      L +L  L 
Sbjct: 207 QLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQL-----AILLIEVGKLQNLHTLN 261

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 331
           L +N L  +P +  K +  L  L+LS N + +LP       L +LQ+L L   QL     
Sbjct: 262 LSDNQLTTLPIEIGK-LQNLHTLNLSGNQLTTLP--IEIGKLQNLQDLNLHSNQLTTLSK 318

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           +I +L+ L+ L LS N L  +P+    L +L EL+L +N ++ALP E+G L+ +LQ L L
Sbjct: 319 EIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQ-NLQTLSL 377

Query: 392 DGNPLRSIRRTI 403
             N L +  + I
Sbjct: 378 YKNRLMTFPKEI 389



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 171/373 (45%), Gaps = 43/373 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+L  L    I     L EL  S N L  +P+ IG L  L RLDL+ NR+  
Sbjct: 73  LQKLYLFDNRLKTLPKE-IGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L   Y+ +N L+ LP E GKL  L  L+L  NQL     E  QL+ L  L
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTL 191

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L +N L+ L  EI ++  L+ L L+ N L TL         P  +  L++         
Sbjct: 192 NLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTL---------PIEIGKLQNL-------- 234

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                L+L    L+ +  E+ +   +  L+LS N +  LP E+ 
Sbjct: 235 -------------------HTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIG 275

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L TL LS N++   P  I   L +L  L L +N L  + S   + +  LQ L LSY
Sbjct: 276 KLQNLHTLNLSGNQLTTLPIEI-GKLQNLQDLNLHSNQLTTL-SKEIEQLKNLQTLSLSY 333

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +  LP+      L +LQEL L   QL   P +I +LQ L+ L L +N L + P+    
Sbjct: 334 NRLVILPK--EIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQ 391

Query: 359 LTSLTELDLSDNN 371
           L +L  L L  +N
Sbjct: 392 LKNLQTLYLGGHN 404



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 135/287 (47%), Gaps = 42/287 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS  + + LP EI ++  L+KL L  N L+TL         P  +  L++   
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTL---------PKEIGQLKNL-- 96

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                    +EL+L    L+ +P EI +   + +LDL  N +  
Sbjct: 97  -------------------------QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQTL LS N++   P      L +L  L L +N L  +P +    +  LQ
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRES-GKLENLQELNLSDNQLTTLPQE-IGQLQNLQ 189

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L+L  N + +L +      L +LQ L L   QL   P +I +LQ L  L+LS N L  +
Sbjct: 190 TLNLKSNQLTTLFK--EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAIL 247

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
                 L +L  L+LSDN ++ LP E+G L+ +L  L L GN L ++
Sbjct: 248 LIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQ-NLHTLNLSGNQLTTL 293



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 111/210 (52%), Gaps = 6/210 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L G N + +P EI +   + KL L  N ++ LP E+    +LQ L
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            LS N++   P  I   L +L  L L +N L  +P +  K +  LQ L LS N + +LP 
Sbjct: 100 NLSSNQLTILPKEI-GKLENLQRLDLYDNRLTILPIEIGK-LQNLQTLYLSSNQLTTLPR 157

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +LQEL L   QL   P +I +LQ L+ L+L  N L ++ +  + L +L  L+
Sbjct: 158 ES--GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLN 215

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPL 396
           LSDN ++ LP E+G L+ +L  L L  N L
Sbjct: 216 LSDNQLTTLPIEIGKLQ-NLHTLNLSDNQL 244



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 85/180 (47%), Gaps = 27/180 (15%)

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           LDLS  +   LP E+    +LQ L L  N++K  P  I   L +L  L L +N L  +P 
Sbjct: 53  LDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEI-GQLKNLQELNLSSNQLTILPK 111

Query: 284 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
           +                            L +LQ L L   +L   P +I +LQ L+ L 
Sbjct: 112 E-------------------------IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLY 146

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           LS N L ++P     L +L EL+LSDN ++ LP E+G L+ +LQ L L  N L ++ + I
Sbjct: 147 LSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQ-NLQTLNLKSNQLTTLFKEI 205



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 4/111 (3%)

Query: 292 LQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
           +++LDLS  N  +LP+      L +LQ+LYL   +L+  P +I +L+ L+ L+LS N L 
Sbjct: 50  VRVLDLSGQNFTTLPK--EIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLT 107

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
            +P+    L +L  LDL DN ++ LP E+G L+ +LQ L L  N L ++ R
Sbjct: 108 ILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQ-NLQTLYLSSNQLTTLPR 157


>gi|149173780|ref|ZP_01852409.1| putative lipoprotein [Planctomyces maris DSM 8797]
 gi|148847310|gb|EDL61644.1| putative lipoprotein [Planctomyces maris DSM 8797]
          Length = 470

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 171/391 (43%), Gaps = 44/391 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++  N L+ LS   I +   LT L  S N +  +P+ IG+LS+L  LDL +N+++ +  
Sbjct: 72  LNISDNSLSELSPE-IGNLKNLTWLNVSDNSIRYLPDEIGNLSQLKELDLSENKLMRLDP 130

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
                 SL    + +N L  LP E G L  L  L+L S                      
Sbjct: 131 EFGQLSSLERLNLSSNWLKTLPPEFGMLENLRDLNLDS---------------------- 168

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           NS++ LPP   K+  L  L + GN + T+  S+        L  L++R+      E    
Sbjct: 169 NSIASLPPVFEKLHQLNSLSMNGNEMVTVTDSIGGLKKLRYLYALKNRI-----KELPPQ 223

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
             +L  + T        L L    +  +PSEI     + +LDL +N +  LPPE+    +
Sbjct: 224 IGNLENLET--------LDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLPPEIGKLKN 275

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYNI 301
           L+ L L  N +   P      L+ L  L L NN L  +P+     K IP L +   S  +
Sbjct: 276 LKDLDLMHNDLTSLPKE-FGDLTGLEKLSLQNNNLTSIPASIIRLKKIPELYL--QSNQL 332

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
           +SLP  P F +   L  L+L + Q    P +I +LQ L  L  + N +  +P     L  
Sbjct: 333 SSLP--PEFGNHLSLGGLFLDQNQFTSIPPEIWKLQNLERLSFADNQITELPAEIGRLKK 390

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLD 392
           L  LDL  N I  LPPE+  L  SL +   D
Sbjct: 391 LRSLDLIGNPIKQLPPEISQLT-SLSSFSFD 420



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 129/273 (47%), Gaps = 40/273 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L + GN++  ++++ I     L  L A KN +  +P  IG+L  L  LDL +N+I  
Sbjct: 184 LNSLSMNGNEMVTVTDS-IGGLKKLRYLYALKNRIKELPPQIGNLENLETLDLRENQIEF 242

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +PS I    +L    +  N L++LP E+GKL  L  LDL                     
Sbjct: 243 LPSEIGNLRNLKRLDLFKNHLTSLPPEIGKLKNLKDLDLM-------------------- 282

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN-GPTPALLKYLRSRLPENEDSE 179
             +N L+ LP E G +T L KL L  N L ++ +S++     P L  YL+S      +  
Sbjct: 283 --HNDLTSLPKEFGDLTGLEKLSLQNNNLTSIPASIIRLKKIPEL--YLQS------NQL 332

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           +S   E        LS+    L L+    ++IP EIW+   + +L  + N I ELP E+ 
Sbjct: 333 SSLPPE----FGNHLSLGG--LFLDQNQFTSIPPEIWKLQNLERLSFADNQITELPAEIG 386

Query: 240 SCASLQTLILSRNKIKDWPDAI--LTSLSSLSC 270
               L++L L  N IK  P  I  LTSLSS S 
Sbjct: 387 RLKKLRSLDLIGNPIKQLPPEISQLTSLSSFSF 419



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 136/291 (46%), Gaps = 42/291 (14%)

Query: 115 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           +++ L++S+NSLS L PEIG +  L  L ++ N +R L   + N           S+L  
Sbjct: 68  KVTWLNISDNSLSELSPEIGNLKNLTWLNVSDNSIRYLPDEIGN----------LSQL-- 115

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
                                   KEL L    L  +  E  +   + +L+LS N ++ L
Sbjct: 116 ------------------------KELDLSENKLMRLDPEFGQLSSLERLNLSSNWLKTL 151

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           PPE     +L+ L L  N I   P  +   L  L+ L ++ N +  V +D    +  L+ 
Sbjct: 152 PPEFGMLENLRDLNLDSNSIASLP-PVFEKLHQLNSLSMNGNEMVTV-TDSIGGLKKLRY 209

Query: 295 L-DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           L  L   I  LP  P   +L +L+ L LR  Q+   P++I  L+ L+ LDL +N L S+P
Sbjct: 210 LYALKNRIKELP--PQIGNLENLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLP 267

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
                L +L +LDL  N++++LP E G L   L+ L L  N L SI  +I+
Sbjct: 268 PEIGKLKNLKDLDLMHNDLTSLPKEFGDLT-GLEKLSLQNNNLTSIPASII 317



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 107/199 (53%), Gaps = 6/199 (3%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           +  +P EI    ++ +LDLS N +  L PE    +SL+ L LS N +K  P      L +
Sbjct: 102 IRYLPDEIGNLSQLKELDLSENKLMRLDPEFGQLSSLERLNLSSNWLKTLPPE-FGMLEN 160

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L LD+N +  +P   F+ +  L  L ++ N + ++ ++     L  L+ LY  + ++
Sbjct: 161 LRDLNLDSNSIASLPP-VFEKLHQLNSLSMNGNEMVTVTDS--IGGLKKLRYLYALKNRI 217

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
           +E P  I  L+ L  LDL +N ++ +P    NL +L  LDL  N++++LPPE+G L+ +L
Sbjct: 218 KELPPQIGNLENLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLPPEIGKLK-NL 276

Query: 387 QALRLDGNPLRSIRRTILD 405
           + L L  N L S+ +   D
Sbjct: 277 KDLDLMHNDLTSLPKEFGD 295


>gi|198451552|ref|XP_002137316.1| GA26616, isoform A [Drosophila pseudoobscura pseudoobscura]
 gi|198131539|gb|EDY67874.1| GA26616, isoform A [Drosophila pseudoobscura pseudoobscura]
          Length = 655

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 194/396 (48%), Gaps = 21/396 (5%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK- 90
           +N L  +PE +G L +L  L +  N I+ + S   G  +L E +  NN +S +P  + + 
Sbjct: 273 QNDLTCLPEDMGLLRKLQFLYIQHNDIMEL-SDFEGNETLTELHASNNYISNIPISMCEN 331

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL  N++ +   E C LR     D+SNNS+  LP  +  +  L  L + GNP+
Sbjct: 332 LPHLKVLDLRDNKITQLPDELCLLRNLNRLDVSNNSIDTLPVSLSALAHLISLQVEGNPI 391

Query: 150 RTLRSSLVNGPTPALLKYLRSR-LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 208
           +++R  ++   T  +L+ L+ R + +++D   S +         RL          G + 
Sbjct: 392 KSIRRDILQCGTSRILRTLQERSMVKSKDEVESDSG-----AGARLCGGQA-----GNDT 441

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA---SLQTLILSRNKIKDWPDAILTSL 265
           +A   + ++      L ++   I ++P E+   A    +  +  +RN+++  PD +    
Sbjct: 442 AANYPDRYKLRHTRTLAVNLEEITDVPEEVFQLAQKEGVHVVDFARNQLRTVPDGLQHMQ 501

Query: 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQ 325
           + ++ L L +N + QVP    +   +  +   +  +  LP+   F  L  L+EL +   +
Sbjct: 502 NIVTELVLAHNRIGQVPQFISQFTRITLLNLSNNLLTDLPKE--FGVLNTLRELNIANNR 559

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
               P+ +  LQ L IL  S N +  +   G + +  L+ LDL +N+I  +PP LG L  
Sbjct: 560 FSFLPSGLYDLQGLEILIASDNHINELNVAGLQRMPRLSTLDLRNNDIDFIPPILGTLT- 618

Query: 385 SLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           ++  L L GNP R  R  IL +GT++++ YL+D++P
Sbjct: 619 NITHLELVGNPFRQPRHQILMKGTESIMSYLRDRVP 654



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 172/373 (46%), Gaps = 73/373 (19%)

Query: 76  MGNNALSALPAELGKL------SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGL 129
           + N  L+++P  L  +      SK  TL+  S  +K+      Q+ L+ LDLS+N+LS +
Sbjct: 84  LSNKGLASVPERLYDINEADAESKAATLEQLS--IKDEDAWWNQVPLTNLDLSSNALSHI 141

Query: 130 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 189
            P+I  + +L  L+L  N L  L         PA +  L   +                 
Sbjct: 142 SPKIENLQSLTVLILHDNALVAL---------PAEIGKLEKLM----------------- 175

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
              RL+V+  +       LS +P E++   E+  L++S N   EL P++S    L+ L  
Sbjct: 176 ---RLNVSRNK-------LSDLPRELYSLPELRHLNISYNEFSELNPDISDLHMLEFLDA 225

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 308
             N IK  P  I   L  L+ L L  N ++ +P D   ++  LQ LDL  N +  LPE+ 
Sbjct: 226 GHNSIKSLPGGI-GFLVRLTALLLPYNHIKDLPPD-LVNMRSLQRLDLMQNDLTCLPED- 282

Query: 309 PFSSLPHLQELYLRRMQLRE--------------APTDIL---------RLQQLRILDLS 345
               L  LQ LY++   + E              A  + +          L  L++LDL 
Sbjct: 283 -MGLLRKLQFLYIQHNDIMELSDFEGNETLTELHASNNYISNIPISMCENLPHLKVLDLR 341

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
            N +  +P+    L +L  LD+S+N+I  LP  L  L   L +L+++GNP++SIRR IL 
Sbjct: 342 DNKITQLPDELCLLRNLNRLDVSNNSIDTLPVSLSAL-AHLISLQVEGNPIKSIRRDILQ 400

Query: 406 RGTKAVLKYLKDK 418
            GT  +L+ L+++
Sbjct: 401 CGTSRILRTLQER 413



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 2/172 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D   N+L  + + L     ++TEL+ + N +  +P+ I   +R+  L+L  N +  +P 
Sbjct: 483 VDFARNQLRTVPDGLQHMQNIVTELVLAHNRIGQVPQFISQFTRITLLNLSNNLLTDLPK 542

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDL 121
                 +L E  + NN  S LP+ L  L  L  L    N + E  V   Q   RLS LDL
Sbjct: 543 EFGVLNTLRELNIANNRFSFLPSGLYDLQGLEILIASDNHINELNVAGLQRMPRLSTLDL 602

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            NN +  +PP +G +T +  L L GNP R  R  ++   T +++ YLR R+P
Sbjct: 603 RNNDIDFIPPILGTLTNITHLELVGNPFRQPRHQILMKGTESIMSYLRDRVP 654



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 178/406 (43%), Gaps = 57/406 (14%)

Query: 20  ASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           A W    LT L  S N L+ +   I +L  L  L LH N ++++P+ I     L    + 
Sbjct: 121 AWWNQVPLTNLDLSSNALSHISPKIENLQSLTVLILHDNALVALPAEIGKLEKLMRLNVS 180

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
            N LS LP EL  L +L  L++  N+  E   +   L  L  LD  +NS+  LP  IG +
Sbjct: 181 RNKLSDLPRELYSLPELRHLNISYNEFSELNPDISDLHMLEFLDAGHNSIKSLPGGIGFL 240

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPEN------------------ 175
             L  LLL  N ++ L   LVN  +   L  +++    LPE+                  
Sbjct: 241 VRLTALLLPYNHIKDLPPDLVNMRSLQRLDLMQNDLTCLPEDMGLLRKLQFLYIQHNDIM 300

Query: 176 --EDSEASTTKEDL-----------ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 222
              D E + T  +L           I+M   L    K L L    ++ +P E+     + 
Sbjct: 301 ELSDFEGNETLTELHASNNYISNIPISMCENLPHL-KVLDLRDNKITQLPDELCLLRNLN 359

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKD--------WPDAILTSLSSLSCLKLD 274
           +LD+S NSI  LP  LS+ A L +L +  N IK             IL +L   S +K  
Sbjct: 360 RLDVSNNSIDTLPVSLSALAHLISLQVEGNPIKSIRRDILQCGTSRILRTLQERSMVKSK 419

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           +    +V SD      +      +   A+ P+      L H + L +   ++ + P ++ 
Sbjct: 420 D----EVESDSGAGARLCGGQAGNDTAANYPDR---YKLRHTRTLAVNLEEITDVPEEVF 472

Query: 335 RLQQ---LRILDLSQNSLQSIPEGFKNLTSL-TELDLSDNNISALP 376
           +L Q   + ++D ++N L+++P+G +++ ++ TEL L+ N I  +P
Sbjct: 473 QLAQKEGVHVVDFARNQLRTVPDGLQHMQNIVTELVLAHNRIGQVP 518


>gi|440797010|gb|ELR18105.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 950

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 182/406 (44%), Gaps = 44/406 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LDV  N LT L   ++A  + L  L  S N L  +   +G L  L RLDL  NR+L 
Sbjct: 166 LVELDVATNHLTALPA-MLAHLSSLRRLNVSSNRLVHLGPQLGDLPDLERLDLRFNRLLR 224

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE---------- 110
           +P  +     L    + +N L++LPA L  LS L  L ++ N+L     +          
Sbjct: 225 LPDELGRLAQLNSLLLDHNDLASLPAALSTLSTLKLLSINENRLAHLPPDALALPALAEL 284

Query: 111 ---------------ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
                          A    L  LDL++N L  LPP +G +  L  L L  N L  L + 
Sbjct: 285 SLRANRLTALPPEPLAALTALQTLDLAHNLLPFLPPALGTLPRLTNLFLGANLLTLLPTE 344

Query: 156 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 215
           L       L +     L +N   E       +  +A         L +    L+A+P  I
Sbjct: 345 LC-----GLSQLAELELQDNALEELPAELGQMEKLA--------HLDVRNNQLTALPPSI 391

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
            +  ++  LD   N I +LPPEL + +SL  L LS N+I D P+           L L  
Sbjct: 392 GQLVKLRLLDAGMNLISDLPPELYAVSSLARLSLSGNRISDLPEDFCRLTRLER-LLLGY 450

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N L  +P+ G   +  L +L LS N + +LP  P    L  L+ELY+    L E PT++ 
Sbjct: 451 NQLSTLPA-GLNQLTHLTVLSLSGNRLTTLP--PVVFDLTWLKELYVAANGLTELPTEVG 507

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           RL  L ILDL+ N L ++PE       LTEL+ S N ++++P  LG
Sbjct: 508 RLTTLEILDLTSNHLTALPEELGCCVRLTELEASHNRLASVPASLG 553



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 166/331 (50%), Gaps = 19/331 (5%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
            N+LT L    +A+ T L  L  + NLL  +P  +G+L RL  L L  N +  +P+ + G
Sbjct: 288 ANRLTALPPEPLAALTALQTLDLAHNLLPFLPPALGTLPRLTNLFLGANLLTLLPTELCG 347

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 126
              LAE  + +NAL  LPAELG++ KL  LD+ +NQL        QL +L +LD   N +
Sbjct: 348 LSQLAELELQDNALEELPAELGQMEKLAHLDVRNNQLTALPPSIGQLVKLRLLDAGMNLI 407

Query: 127 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 186
           S LPPE+  +++L +L L+GN +  L            L    ++L         +T   
Sbjct: 408 SDLPPELYAVSSLARLSLSGNRISDLPEDFCRLTRLERLLLGYNQL---------STLPA 458

Query: 187 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
            +   T L+V    LSL G  L+ +P  +++   + +L ++ N + ELP E+    +L+ 
Sbjct: 459 GLNQLTHLTV----LSLSGNRLTTLPPVVFDLTWLKELYVAANGLTELPTEVGRLTTLEI 514

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           L L+ N +   P+  L     L+ L+  +N L  VP+     + +++I DLS N + +LP
Sbjct: 515 LDLTSNHLTALPEE-LGCCVRLTELEASHNRLASVPASLGNLVSLVEI-DLSANELTTLP 572

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
             P  + L  L+ L L   +L+  P ++  L
Sbjct: 573 --PELARLTALRHLKLCHCRLQRLPRELAAL 601



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 120/390 (30%), Positives = 182/390 (46%), Gaps = 17/390 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++KL+V  N L  L   +  +  +L EL    N L  +P  +G    L RL  + N++  
Sbjct: 96  LTKLEVGNNALVALPEGMFEAMPLLEELSCFMNQLQRLPREVGWARSLKRLVAYVNQLQR 155

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  +  C  L E  +  N L+ALPA L  LS L  L++ SN+L     +   L  L  L
Sbjct: 156 LPEELGLCADLVELDVATNHLTALPAMLAHLSSLRRLNVSSNRLVHLGPQLGDLPDLERL 215

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL  N L  LP E+G++  L  LLL  N L +L ++L    T  LL    +RL       
Sbjct: 216 DLRFNRLLRLPDELGRLAQLNSLLLDHNDLASLPAALSTLSTLKLLSINENRLAHLPPDA 275

Query: 180 ASTTKEDLITM-ATRLSVTSKE-----LSLEGMNLSA-----IPSEIWEAGEITKLDLSR 228
            +      +++ A RL+    E      +L+ ++L+      +P  +     +T L L  
Sbjct: 276 LALPALAELSLRANRLTALPPEPLAALTALQTLDLAHNLLPFLPPALGTLPRLTNLFLGA 335

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +  LP EL   + L  L L  N +++ P A L  +  L+ L + NN L  +P      
Sbjct: 336 NLLTLLPTELCGLSQLAELELQDNALEELP-AELGQMEKLAHLDVRNNQLTALPPS-IGQ 393

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  L++LD   N I+ LP  P   ++  L  L L   ++ + P D  RL +L  L L  N
Sbjct: 394 LVKLRLLDAGMNLISDLP--PELYAVSSLARLSLSGNRISDLPEDFCRLTRLERLLLGYN 451

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L ++P G   LT LT L LS N ++ LPP
Sbjct: 452 QLSTLPAGLNQLTHLTVLSLSGNRLTTLPP 481



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 177/410 (43%), Gaps = 71/410 (17%)

Query: 3   KLDVEGNKLTVLSNNLIASWTM-----LTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 57
           KLD+   +LT   N  IA   +     LT L A+ N  + +P  I  L++L RL L +N 
Sbjct: 26  KLDISSRQLT---NAQIAHLKLSCLKSLTFLNANYNRFDRLPPNIAKLAKLQRLMLVKNN 82

Query: 58  ILSIPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQLR- 115
           +  +P  I    +L +  +GNNAL ALP  + + +  L  L    NQL+    E    R 
Sbjct: 83  LTMLPVEICHLRNLTKLEVGNNALVALPEGMFEAMPLLEELSCFMNQLQRLPREVGWARS 142

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L  L    N L  LP E+G    L +L +  N L  L         PA+L +L S     
Sbjct: 143 LKRLVAYVNQLQRLPEELGLCADLVELDVATNHLTAL---------PAMLAHLSS----- 188

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                            RL+V+S  L   G  L  +P       ++ +LDL  N +  LP
Sbjct: 189 ---------------LRRLNVSSNRLVHLGPQLGDLP-------DLERLDLRFNRLLRLP 226

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN-------------------- 275
            EL   A L +L+L  N +   P A+ T  +       +N                    
Sbjct: 227 DELGRLAQLNSLLLDHNDLASLPAALSTLSTLKLLSINENRLAHLPPDALALPALAELSL 286

Query: 276 --NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLPHLQELYLRRMQLREAPTD 332
             N L  +P +    +  LQ LDL++N+  LP  PP   +LP L  L+L    L   PT+
Sbjct: 287 RANRLTALPPEPLAALTALQTLDLAHNL--LPFLPPALGTLPRLTNLFLGANLLTLLPTE 344

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
           +  L QL  L+L  N+L+ +P     +  L  LD+ +N ++ALPP +G L
Sbjct: 345 LCGLSQLAELELQDNALEELPAELGQMEKLAHLDVRNNQLTALPPSIGQL 394



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 36/207 (17%)

Query: 193 RLSVTSKELS---LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
           +L ++S++L+   +  + LS + S       +T L+ + N    LPP ++  A LQ L+L
Sbjct: 26  KLDISSRQLTNAQIAHLKLSCLKS-------LTFLNANYNRFDRLPPNIAKLAKLQRLML 78

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP 309
            +N +   P  I   L +L+ L++ NN L  +P   F+ +P+L+ L    N         
Sbjct: 79  VKNNLTMLPVEI-CHLRNLTKLEVGNNALVALPEGMFEAMPLLEELSCFMN--------- 128

Query: 310 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
                          QL+  P ++   + L+ L    N LQ +PE       L ELD++ 
Sbjct: 129 ---------------QLQRLPREVGWARSLKRLVAYVNQLQRLPEELGLCADLVELDVAT 173

Query: 370 NNISALPPELGLLEPSLQALRLDGNPL 396
           N+++ALP  L  L  SL+ L +  N L
Sbjct: 174 NHLTALPAMLAHLS-SLRRLNVSSNRL 199


>gi|455790003|gb|EMF41899.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 428

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 183/372 (49%), Gaps = 51/372 (13%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ I  L  L +L L  NR+ ++P  I    +L E  + +N L+ LP E+GKL  L  L
Sbjct: 63  LPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRL 122

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL+ N+L    +E  +L+ L  L LS+N L+ LP E GK+  L++L L+ N L TL    
Sbjct: 123 DLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTL---- 178

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                P  +  L++                            + L+L+   L+ +  EI 
Sbjct: 179 -----PQEIGQLQNL---------------------------QTLNLKSNQLTTLFKEIE 206

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL----TSLSSLSCLK 272
           +   +  L+LS N +  LP E+    +L TL LS N++     AIL      L +L  L 
Sbjct: 207 QLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQL-----AILLIEVGKLQNLHTLN 261

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 331
           L +N L  +P +  K +  L  L+LS N + +LP       L +LQ+L L   QL     
Sbjct: 262 LSDNQLTTLPIEIGK-LQNLHTLNLSGNQLTTLP--IEIGKLQNLQDLNLHSNQLTTLSK 318

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           +I +L+ L+ L LS N L  +P+    L +L EL+L +N ++ALP E+G L+ +LQ L L
Sbjct: 319 EIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQ-NLQTLSL 377

Query: 392 DGNPLRSIRRTI 403
             N L +  + I
Sbjct: 378 YKNRLMTFPKEI 389



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 171/373 (45%), Gaps = 43/373 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+L  L    I     L EL  S N L  +P+ IG L  L RLDL+ NR+  
Sbjct: 73  LQKLYLFDNRLKTLPKE-IGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L   Y+ +N L+ LP E GKL  L  L+L  NQL     E  QL+ L  L
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTL 191

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L +N L+ L  EI ++  L+ L L+ N L TL         P  +  L++         
Sbjct: 192 NLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTL---------PIEIGKLQNL-------- 234

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                L+L    L+ +  E+ +   +  L+LS N +  LP E+ 
Sbjct: 235 -------------------HTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIG 275

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L TL LS N++   P  I   L +L  L L +N L  + S   + +  LQ L LSY
Sbjct: 276 KLQNLHTLNLSGNQLTTLPIEI-GKLQNLQDLNLHSNQLTTL-SKEIEQLKNLQTLSLSY 333

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +  LP+      L +LQEL L   QL   P +I +LQ L+ L L +N L + P+    
Sbjct: 334 NRLVILPK--EIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQ 391

Query: 359 LTSLTELDLSDNN 371
           L +L  L L  +N
Sbjct: 392 LKNLQTLYLGGHN 404



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 135/287 (47%), Gaps = 42/287 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS  + + LP +I K+  L+KL L  N L+TL         P  +  L++   
Sbjct: 48  LNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTL---------PKEIGQLKNL-- 96

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                    +EL+L    L+ +P EI +   + +LDL  N +  
Sbjct: 97  -------------------------QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQTL LS N++   P      L +L  L L +N L  +P +    +  LQ
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRES-GKLGNLQELNLSDNQLTTLPQE-IGQLQNLQ 189

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L+L  N + +L +      L +LQ L L   QL   P +I +LQ L  L+LS N L  +
Sbjct: 190 TLNLKSNQLTTLFK--EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAIL 247

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
                 L +L  L+LSDN ++ LP E+G L+ +L  L L GN L ++
Sbjct: 248 LIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQ-NLHTLNLSGNQLTTL 293



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 115/221 (52%), Gaps = 7/221 (3%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
           D +   T  DL T A +  +  + L L G N + +P +I +   + KL L  N ++ LP 
Sbjct: 30  DEDEPGTYMDL-TKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPK 88

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+    +LQ L LS N++   P  I   L +L  L L +N L  +P +  K +  LQ L 
Sbjct: 89  EIGQLKNLQELNLSSNQLTILPKEI-GKLENLQRLDLYDNRLTILPIEIGK-LQNLQTLY 146

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           LS N + +LP       L +LQEL L   QL   P +I +LQ L+ L+L  N L ++ + 
Sbjct: 147 LSSNQLTTLPRES--GKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKE 204

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            + L +L  L+LSDN ++ LP E+G L+ +L  L L  N L
Sbjct: 205 IEQLKNLQTLNLSDNQLTTLPIEIGKLQ-NLHTLNLSDNQL 244



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 27/180 (15%)

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           LDLS  +   LP ++    +LQ L L  N++K  P  I   L +L  L L +N L  +P 
Sbjct: 53  LDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEI-GQLKNLQELNLSSNQLTILPK 111

Query: 284 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
           +                            L +LQ L L   +L   P +I +LQ L+ L 
Sbjct: 112 E-------------------------IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLY 146

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           LS N L ++P     L +L EL+LSDN ++ LP E+G L+ +LQ L L  N L ++ + I
Sbjct: 147 LSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQ-NLQTLNLKSNQLTTLFKEI 205



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 4/111 (3%)

Query: 292 LQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
           +++LDLS  N  +LP+      L +LQ+LYL   +L+  P +I +L+ L+ L+LS N L 
Sbjct: 50  VRVLDLSGQNFTTLPK--KIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLT 107

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
            +P+    L +L  LDL DN ++ LP E+G L+ +LQ L L  N L ++ R
Sbjct: 108 ILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQ-NLQTLYLSSNQLTTLPR 157


>gi|428168746|gb|EKX37687.1| hypothetical protein GUITHDRAFT_77856 [Guillardia theta CCMP2712]
          Length = 648

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 205/406 (50%), Gaps = 30/406 (7%)

Query: 22  WTMLTELIASKNLLNGMP-ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 80
           WT L EL  S N +  +P + +  L  L ++D+  N+++ +   +S    L  F + NN 
Sbjct: 206 WTGLKELDLSHNKITVLPVQILQPLKELSQVDVSSNQLVEVREDVSRLLHLRLFDLRNNL 265

Query: 81  LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           +++LP  LG L +L TL + +N+L E    +  C   L+ L LS N+L+ LPP +G +T+
Sbjct: 266 MTSLPGSLGALKQLDTLLVDNNKLTELTAAISDCS-SLTFLSLSKNNLTSLPPPLGILTS 324

Query: 139 LRKLLLTGNPL-RTLRSSLVNGPTPALLKYLRSR---LPENEDSEASTTKEDLITMATRL 194
           L+ L +  N L  T+ + ++   +  +L   R++   LPE               +  RL
Sbjct: 325 LKTLQVMDNQLLSTMPAEVLLLSSLTVLSLARNKIEHLPEE--------------LGHRL 370

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
           S   + L LE   L  +P  I  AG +  LDL  N    LP  + S   L+ L L+ N +
Sbjct: 371 S-QLRMLDLESNKLKKLPDSIGIAGSLKLLDLESNLFTSLPSVVLSLTRLEELRLAGNDL 429

Query: 255 KDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
              P  +  L S +SL+ + L++N + +VP D  K +  L +L +S N I+ LP++    
Sbjct: 430 SQLPLELGRLVSPASLTSITLNDNAISEVPGDISK-LTSLVLLSMSNNNISQLPKHSFLL 488

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
               L+ L +    L   P  +  L++L  LDL+ N L+ IP     LT L +L + DN 
Sbjct: 489 LS-SLRSLNVAGNPLTVLPVTLGSLKKLEYLDLNDNRLREIPASVCKLTRLRDLSVMDNK 547

Query: 372 ISALPPELGLLEPSLQALRLDGNP-LRSIRRTILDRGTKAVLKYLK 416
           + ++ PE+GL+  +L+ L+L+ N  L+     +  RG +A L YL+
Sbjct: 548 LLSIAPEVGLIT-TLRRLQLENNAKLKCPPVEVYSRGIQATLSYLR 592



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 168/396 (42%), Gaps = 61/396 (15%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           ++ + N L+ L   L AS T LTEL  + N L  +P  +     L+ LD   N + S+PS
Sbjct: 2   INCDKNYLSHLPLQLNAS-TGLTELRVANNQLLDLPSYLDFFGALVLLDARDNVLQSLPS 60

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
           S++   SL    +  N +  LP  LG L  L  LD   N L       C+L +L  + LS
Sbjct: 61  SLTLLSSLTRLRISRNKIEELPEALGSLVSLTELDADENALSRLPQSLCELNKLRTIRLS 120

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            NSLS LP  +G++  L  L L+ N L  +  S  N                        
Sbjct: 121 CNSLSELPLGVGRLVNLETLTLSDNKLTRIPLSFRN------------------------ 156

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                ++M T L V    L+L    L ++P+E      +T   +  N   + P  L    
Sbjct: 157 -----LSMLTNLQV----LNLNRNQLDSLPAEFTGLTNLTSFSIQSNHFLQAPACLQLWT 207

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
            L+ L LS NKI   P  IL  L  LS + + +N L +V  D                  
Sbjct: 208 GLKELDLSHNKITVLPVQILQPLKELSQVDVSSNQLVEVRED------------------ 249

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
                   S L HL+   LR   +   P  +  L+QL  L +  N L  +     + +SL
Sbjct: 250 -------VSRLLHLRLFDLRNNLMTSLPGSLGALKQLDTLLVDNNKLTELTAAISDCSSL 302

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           T L LS NN+++LPP LG+L  SL+ L++  N L S
Sbjct: 303 TFLSLSKNNLTSLPPPLGILT-SLKTLQVMDNQLLS 337



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 104/240 (43%), Gaps = 16/240 (6%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           NK+  L   L    + L  L    N L  +P++IG    L  LDL  N   S+PS +   
Sbjct: 357 NKIEHLPEELGHRLSQLRMLDLESNKLKKLPDSIGIAGSLKLLDLESNLFTSLPSVVLSL 416

Query: 69  CSLAEFYMGNNALSALPAELGKL---SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 124
             L E  +  N LS LP ELG+L   + L ++ L+ N + E   +  +L  L +L +SNN
Sbjct: 417 TRLEELRLAGNDLSQLPLELGRLVSPASLTSITLNDNAISEVPGDISKLTSLVLLSMSNN 476

Query: 125 SLSGLPPEIGKMTTLRKLL-LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           ++S LP     + +  + L + GNPL  L  +L +      L    +RL E   S    T
Sbjct: 477 NISQLPKHSFLLLSSLRSLNVAGNPLTVLPVTLGSLKKLEYLDLNDNRLREIPASVCKLT 536

Query: 184 K-EDLITMATRLSVTSKELSL----------EGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
           +  DL  M  +L   + E+ L              L   P E++  G    L   R+ +Q
Sbjct: 537 RLRDLSVMDNKLLSIAPEVGLITTLRRLQLENNAKLKCPPVEVYSRGIQATLSYLRSIMQ 596


>gi|359726570|ref|ZP_09265266.1| hypothetical protein Lwei2_06132 [Leptospira weilii str.
           2006001855]
          Length = 540

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 185/392 (47%), Gaps = 15/392 (3%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           NKLT L    I     L EL +  N L  +P+ IG L  L  L+L  NR+ ++P  I   
Sbjct: 142 NKLTTLPKE-IGQLQNLQELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQL 200

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 127
            +L    + +N L  LP E+G+L  L TL+L +N+L  +  E  QL+ L  L+L NN L+
Sbjct: 201 QNLQTLDLRDNQLIILPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLT 260

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
             P EIG++  LR L L  NPL       +    P     LR    +      +  +E+ 
Sbjct: 261 TFPKEIGQLQNLRDLELLINPLSLKERKRIQKLFPNSNLDLREVAKDGVYHNLNLAQEEP 320

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           + +   LS+  K  S         P EI +   +  L L       +P E+    +L+ L
Sbjct: 321 LQVL-ELSIAYKSFS------QLFPKEILKFRNLQSLYLYDCGFPTVPKEIGRLKNLKYL 373

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
           +L  N + + P  I   L +L  L L+ N L  +P +    +  L  L L  N + + P+
Sbjct: 374 LLGLNGLHNLPSTI-GQLRNLRGLNLEANLLESLPKE-IARLRNLHTLRLHQNKLKTFPK 431

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L  LQ+L L   +L+  P ++ RLQ L+ LDLS N L  +P+    L +L EL 
Sbjct: 432 E--ILQLGKLQKLDLSANELKILPEELERLQNLQELDLSHNQLTILPKEIAKLQNLQELH 489

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L+ N ++ LP E+G L+  L+ LRL  N   S
Sbjct: 490 LNGNQLTTLPSEIGFLK-KLKILRLYQNEFSS 520



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 192/416 (46%), Gaps = 45/416 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L    I     L  L   KN L  +P+ IG L  L  L    NR+ +
Sbjct: 111 LEMLDLSENRLIILPAE-IGLLQSLQSLSLYKNKLTTLPKEIGQLQNLQELWSPGNRLTT 169

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    + NN L+ALP E+G+L  L TLDL  NQL     E  QL+ L  L
Sbjct: 170 LPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRDNQLIILPKEIGQLQNLQTL 229

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS------------LVNGPTPALLKY 167
           +L NN L+  P EIG++  L+ L L  N L T                L+N  +    K 
Sbjct: 230 NLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLRDLELLINPLSLKERKR 289

Query: 168 LRSRLPENEDSEASTTKEDL---ITMATRLSVTSKELSLEGMNLSAI-PSEIWEAGEITK 223
           ++   P +        K+ +   + +A    +   ELS+   + S + P EI +   +  
Sbjct: 290 IQKLFPNSNLDLREVAKDGVYHNLNLAQEEPLQVLELSIAYKSFSQLFPKEILKFRNLQS 349

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           L L       +P E+    +L+ L+L  N + + P  I   L +L  L L+ N L  +P 
Sbjct: 350 LYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTI-GQLRNLRGLNLEANLLESLPK 408

Query: 284 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
           +                          + L +L  L L + +L+  P +IL+L +L+ LD
Sbjct: 409 E-------------------------IARLRNLHTLRLHQNKLKTFPKEILQLGKLQKLD 443

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LS N L+ +PE  + L +L ELDLS N ++ LP E+  L+ +LQ L L+GN L ++
Sbjct: 444 LSANELKILPEELERLQNLQELDLSHNQLTILPKEIAKLQ-NLQELHLNGNQLTTL 498



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 185/422 (43%), Gaps = 84/422 (19%)

Query: 46  SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 105
           S++  L+L    + ++P  I    +L E Y+  N L A+P E+G+L  L TLDL  NQL 
Sbjct: 40  SKVRVLNLSGQELATLPKEIGQLQNLQELYLQWNQLIAIPKEIGQLQNLQTLDLRDNQLV 99

Query: 106 EYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164
            +  E  +L +L +LDLS N L  LP EIG + +L+ L L  N L TL         P  
Sbjct: 100 TFPKEMVELQKLEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTL---------PKE 150

Query: 165 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEI 215
           +  L++              ++L +   RL+   KE         L+L    L+A+P EI
Sbjct: 151 IGQLQNL-------------QELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEI 197

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
            +   +  LDL  N +  LP E+    +LQTL L  N++  +P  I   L +L  L L N
Sbjct: 198 GQLQNLQTLDLRDNQLIILPKEIGQLQNLQTLNLVNNRLTTFPKEI-GQLQNLQTLNLVN 256

Query: 276 N------------------------------------------PLRQVPSDG-FKDIPM- 291
           N                                           LR+V  DG + ++ + 
Sbjct: 257 NRLTTFPKEIGQLQNLRDLELLINPLSLKERKRIQKLFPNSNLDLREVAKDGVYHNLNLA 316

Query: 292 ----LQILDLSYNIASLPENPPFSSLP--HLQELYLRRMQLREAPTDILRLQQLRILDLS 345
               LQ+L+LS    S  +  P   L   +LQ LYL        P +I RL+ L+ L L 
Sbjct: 317 QEEPLQVLELSIAYKSFSQLFPKEILKFRNLQSLYLYDCGFPTVPKEIGRLKNLKYLLLG 376

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
            N L ++P     L +L  L+L  N + +LP E+  L  +L  LRL  N L++  + IL 
Sbjct: 377 LNGLHNLPSTIGQLRNLRGLNLEANLLESLPKEIARLR-NLHTLRLHQNKLKTFPKEILQ 435

Query: 406 RG 407
            G
Sbjct: 436 LG 437



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 113/228 (49%), Gaps = 6/228 (2%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+ E  T  +  +T A +     + L+L G  L+ +P EI +   + +L L  N +  +P
Sbjct: 22  EEVEQGTYTD--LTKALQNPSKVRVLNLSGQELATLPKEIGQLQNLQELYLQWNQLIAIP 79

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQTL L  N++  +P   +  L  L  L L  N L  +P++      +  + 
Sbjct: 80  KEIGQLQNLQTLDLRDNQLVTFPKE-MVELQKLEMLDLSENRLIILPAEIGLLQSLQSLS 138

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
                + +LP+      L +LQEL+    +L   P +I +L+ L+ L+L+ N L ++P+ 
Sbjct: 139 LYKNKLTTLPKE--IGQLQNLQELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKE 196

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L +L  LDL DN +  LP E+G L+ +LQ L L  N L +  + I
Sbjct: 197 IGQLQNLQTLDLRDNQLIILPKEIGQLQ-NLQTLNLVNNRLTTFPKEI 243


>gi|156375467|ref|XP_001630102.1| predicted protein [Nematostella vectensis]
 gi|156217116|gb|EDO38039.1| predicted protein [Nematostella vectensis]
          Length = 418

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 194/415 (46%), Gaps = 41/415 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L + GN LT L + + A    LTEL  ++N L  +PE++G LS+L  L+L  N++  
Sbjct: 24  LTELYLTGNLLTSLPD-VFARLGNLTELHLNENSLEELPESLGKLSKLRVLNLTGNKLEK 82

Query: 61  IPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 118
           +     +G  SL E  +  N LS L      +  L  L+L  N ++    +   LR L V
Sbjct: 83  LRDDFGAGLASLTELRIDENDLSELSVSFTLMKNLKVLELGDNHIERLPEDFGNLRKLEV 142

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           ++LS N++  LP   G +  L+   +TGN +  L        +   L++L +      D+
Sbjct: 143 VNLSQNNIEKLPESFGFLCCLKSFDITGNHIENLPERF---ESACFLEHLYA------DN 193

Query: 179 EASTTKEDLIT---MATRLSVTSKELSLEGMNLSAIPSEIWE--AGEITKLDLSRNSIQE 233
              T   D          L ++  ELS      SA+P          ++ LDLS N I +
Sbjct: 194 NNITWLPDWFGDLPNIINLCLSDNELSD-----SALPDHFGSISGKTLSSLDLSGNRITK 248

Query: 234 LPPELSSCASLQTLILSR-------------NKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
           LP  +     L+TL L               N +   PD+  + +++L+ L LD N +  
Sbjct: 249 LPDSMGELKELKTLHLGSTINELERRAFQNGNWLSHLPDSF-SQMANLTKLHLDENQVVC 307

Query: 281 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
           +P D F D+  L+ LD+  N I  LP++  F +L  L  L L +  L E P +   L  L
Sbjct: 308 LPDD-FGDLVNLEWLDVGQNRIEMLPDS--FCNLSKLWFLQLSKNHLTELPENFGNLTSL 364

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
             L L  N L S+P  F NLT++  LDL  N +S +P  L  LE +L  L LDGN
Sbjct: 365 VELRLDSNQLSSLPASFANLTNVKTLDLYRNKLSEIPRVLLKLE-NLMRLDLDGN 418



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 180/414 (43%), Gaps = 32/414 (7%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           +T L    N L  +P+ +GSL+ L  L L  N + S+P   +   +L E ++  N+L  L
Sbjct: 1   ITTLKLDFNDLQRLPDDLGSLASLTELYLTGNLLTSLPDVFARLGNLTELHLNENSLEEL 60

Query: 85  PAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 142
           P  LGKLSKL  L+L  N+L++      A    L+ L +  N LS L      M  L+ L
Sbjct: 61  PESLGKLSKLRVLNLTGNKLEKLRDDFGAGLASLTELRIDENDLSELSVSFTLMKNLKVL 120

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 202
            L  N +  L     N     L K     L +N   +   +   L  +        K   
Sbjct: 121 ELGDNHIERLPEDFGN-----LRKLEVVNLSQNNIEKLPESFGFLCCL--------KSFD 167

Query: 203 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD--WPDA 260
           + G ++  +P     A  +  L    N+I  LP       ++  L LS N++ D   PD 
Sbjct: 168 ITGNHIENLPERFESACFLEHLYADNNNITWLPDWFGDLPNIINLCLSDNELSDSALPDH 227

Query: 261 ILT-SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENP----------- 308
             + S  +LS L L  N + ++P D   ++  L+ L L   I  L               
Sbjct: 228 FGSISGKTLSSLDLSGNRITKLP-DSMGELKELKTLHLGSTINELERRAFQNGNWLSHLP 286

Query: 309 -PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
             FS + +L +L+L   Q+   P D   L  L  LD+ QN ++ +P+ F NL+ L  L L
Sbjct: 287 DSFSQMANLTKLHLDENQVVCLPDDFGDLVNLEWLDVGQNRIEMLPDSFCNLSKLWFLQL 346

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
           S N+++ LP   G L  SL  LRLD N L S+  +  +      L   ++K+ E
Sbjct: 347 SKNHLTELPENFGNL-TSLVELRLDSNQLSSLPASFANLTNVKTLDLYRNKLSE 399


>gi|119569935|gb|EAW49550.1| soc-2 suppressor of clear homolog (C. elegans), isoform CRA_c [Homo
           sapiens]
          Length = 434

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 190/405 (46%), Gaps = 64/405 (15%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           L  S+N L  +P+++ +L +L  LDL  N++  IPS +    SL   Y+  N ++ +  +
Sbjct: 3   LALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKD 62

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 146
           +  LSKL  L +  N++K+   E  +L  L  LD+++N L  LP EIG  T +  L L  
Sbjct: 63  IKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQH 122

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA---------------STTKEDLITMA 191
           N L  L  ++ N  + + L    +RL     S A               ST  E L++  
Sbjct: 123 NELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSL 182

Query: 192 TRLSV--------------------TSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSRNS 230
            +L+                     T   L++E   ++ IP  I+   ++ +KL++  N 
Sbjct: 183 VKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQ 242

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  ++ 
Sbjct: 243 LTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGNLR 300

Query: 291 MLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
            L+ LDL  N                        +L   P +I  L+ L+ L L+ N L 
Sbjct: 301 KLRELDLEEN------------------------KLESLPNEIAYLKDLQKLVLTNNQLT 336

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           ++P G  +LT+LT L L +N ++ LP E+G LE +L+ L L+ NP
Sbjct: 337 TLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLE-NLEELYLNDNP 380



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 204/425 (48%), Gaps = 29/425 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  NKL  + + ++     LT L    N +  + + I +LS+L  L + +N+I  +P+
Sbjct: 26  LDLRHNKLREIPS-VVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPA 84

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I   C+L    + +N L  LP E+G  +++  LDL  N+L +       L  LS L L 
Sbjct: 85  EIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLR 144

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRT----LRSSLVNGPTPALLKYLRSRLPENEDS 178
            N LS +P  + K + L +L L  N + T    L SSLV   +  L +      P    S
Sbjct: 145 YNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPS 204

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKLDLSRNSIQELPPE 237
           + ST                  L++E   ++ IP  I+   ++ +KL++  N +  LP +
Sbjct: 205 QFSTI---------------YSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD 249

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
             +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  G  ++  L+ LDL
Sbjct: 250 FGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-HGLGNLRKLRELDL 307

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
             N + SLP    +  L  LQ+L L   QL   P  I  L  L  L L +N L  +PE  
Sbjct: 308 EENKLESLPNEIAY--LKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEI 365

Query: 357 KNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
             L +L EL L+DN N+ +LP EL L    L  + ++  PL  +   I+  G   ++++L
Sbjct: 366 GTLENLEELYLNDNPNLHSLPFELALCS-KLSIMSIENCPLSHLPPQIVAGGPSFIIQFL 424

Query: 416 KDKIP 420
           K + P
Sbjct: 425 KMQGP 429


>gi|418753822|ref|ZP_13310061.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
 gi|409965822|gb|EKO33680.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
          Length = 326

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 119/331 (35%), Positives = 170/331 (51%), Gaps = 21/331 (6%)

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 134
           + +N L+ LP E+G L KL TLDL  NQLK    E  +L +L  L L NN L+ LP EIG
Sbjct: 3   LSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIG 62

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            +  L++L L  N   TL   + N      L    SRL         TT    I     L
Sbjct: 63  NLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRL---------TTLPKEIGNLQNL 113

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
               +EL+L     + +P EI    ++  LDL+ + +  LP E+     LQ L L +N++
Sbjct: 114 ----QELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQL 169

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 313
           K  P  I   L +L  L L+ N L  +P +   ++  LQ L L  N + +LPE     +L
Sbjct: 170 KTLPKEI-GKLQNLKNLSLNGNELTTLPKE-IGNLQNLQELSLGSNQLTTLPE--KIGNL 225

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
             LQEL L   +L+  P +I  LQ L+ L+L+ N L ++P+  +NL SL  L+LS N++ 
Sbjct: 226 QKLQELSLAGNRLKTLPKEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSLI 285

Query: 374 ALPPELGLLEPSLQALRLDGNP-LRSIRRTI 403
           + P E+G L+  L+ L L GNP LRS +  I
Sbjct: 286 SFPEEIGKLQ-KLKWLYLGGNPFLRSQKEKI 315



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 139/281 (49%), Gaps = 20/281 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  N+LT L    I +   L EL  + N    +PE IG+L +L +L L  +R+ +
Sbjct: 44  LEALHLGNNELTTLPKE-IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTT 102

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I    +L E  + +N  + LP E+G L KL TLDL+ ++L     E  +L +L  L
Sbjct: 103 LPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKL 162

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L  N L  LP EIGK+  L+ L L GN L TL   + N      L+ L+         E
Sbjct: 163 NLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGN------LQNLQ---------E 207

Query: 180 ASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
            S     L T+  ++    K  ELSL G  L  +P EI     + +L+L+ N +  LP E
Sbjct: 208 LSLGSNQLTTLPEKIGNLQKLQELSLAGNRLKTLPKEIGNLQNLQELNLNNNQLTTLPKE 267

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
           + +  SL++L LS N +  +P+ I   L  L  L L  NP 
Sbjct: 268 IENLQSLESLNLSGNSLISFPEEI-GKLQKLKWLYLGGNPF 307



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 4/110 (3%)

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           LDLS+N + +LP+     +L  LQ L L + QL+  P +I +LQ+L  L L  N L ++P
Sbjct: 1   LDLSHNRLTTLPK--EIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLP 58

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           +   NL +L EL+L+ N  + LP E+G L+  LQ L L  + L ++ + I
Sbjct: 59  KEIGNLQNLQELNLNSNQFTTLPEEIGNLQ-KLQKLSLAHSRLTTLPKEI 107


>gi|156373929|ref|XP_001629562.1| predicted protein [Nematostella vectensis]
 gi|261277881|sp|A7SFP1.1|SHOC2_NEMVE RecName: Full=Leucine-rich repeat protein soc-2 homolog
 gi|156216565|gb|EDO37499.1| predicted protein [Nematostella vectensis]
          Length = 577

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 199/410 (48%), Gaps = 28/410 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L + GN++ VL    +     L  L  S+N L  +P+ +  L++L  LDL  N+I  
Sbjct: 111 LRELYLYGNRIAVLPPE-VGLLPNLETLALSENNLTTLPDNLVKLTKLKVLDLRHNKIKE 169

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  I    +L   Y+  N +S + + +G L  L  L L  N++K       QL  L  L
Sbjct: 170 IPDVIYKLTTLTTLYLRFNRISVVESGIGNLKLLERLSLRENKIKILPRVIGQLVHLVTL 229

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL--VNGPTPALLKYLR-SRLPENE 176
           D+S+N +  LP EIG    +  L L  N + +L  S+  +   T   L+Y + S LP   
Sbjct: 230 DISHNHIENLPAEIGNCVHMTSLDLQHNDIPSLPDSIGRLTAMTRLGLRYNQLSSLP--- 286

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELP 235
           DS A+ +  D             E ++EG N++ +P ++  +   +T L LSRN  +  P
Sbjct: 287 DSLANCSGID-------------EFNIEGNNIAELPEKLLSSLKNLTSLTLSRNKFEVFP 333

Query: 236 --PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
             P    C  + T I+  N+++  P  +      LS L + +N L  +P D    I +++
Sbjct: 334 AGPPKQFC-QVNTFIMEHNRMQKIPFGVFNKAKYLSKLNVKDNQLTSLPLDFGSWISLVE 392

Query: 294 ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           +   +  I+ LPE+     L +L+ L L    L++ P  I  L++LR+LD+ +N L+SIP
Sbjct: 393 LNVATNQISKLPED--IQWLVNLEVLILSNNLLKKLPRGIGALRKLRVLDIEENKLESIP 450

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              + L SL  L L  N + +LP  +G L  S+  L +  N L S+ + I
Sbjct: 451 TEIEYLRSLERLVLQSNCLGSLPRSIGYLS-SVTYLSVGENELVSVPQEI 499



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 186/404 (46%), Gaps = 42/404 (10%)

Query: 26  TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 85
           T L  SK  +  +P+ +  L+ L  L L+ NRI  +P  +    +L    +  N L+ LP
Sbjct: 89  TRLDLSKAAVTVLPKELKELTSLRELYLYGNRIAVLPPEVGLLPNLETLALSENNLTTLP 148

Query: 86  AELGKLSKLGTLDLHSNQLKEY---------------------CVEACQLRLSVLD---L 121
             L KL+KL  LDL  N++KE                       VE+    L +L+   L
Sbjct: 149 DNLVKLTKLKVLDLRHNKIKEIPDVIYKLTTLTTLYLRFNRISVVESGIGNLKLLERLSL 208

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
             N +  LP  IG++  L  L ++ N +  L + + N      L    + +P   DS   
Sbjct: 209 RENKIKILPRVIGQLVHLVTLDISHNHIENLPAEIGNCVHMTSLDLQHNDIPSLPDSIGR 268

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-LSS 240
                 +T  TRL +   +       LS++P  +     I + ++  N+I ELP + LSS
Sbjct: 269 ------LTAMTRLGLRYNQ-------LSSLPDSLANCSGIDEFNIEGNNIAELPEKLLSS 315

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             +L +L LSRNK + +P         ++   +++N ++++P   F     L  L++  N
Sbjct: 316 LKNLTSLTLSRNKFEVFPAGPPKQFCQVNTFIMEHNRMQKIPFGVFNKAKYLSKLNVKDN 375

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            + SLP +  F S   L EL +   Q+ + P DI  L  L +L LS N L+ +P G   L
Sbjct: 376 QLTSLPLD--FGSWISLVELNVATNQISKLPEDIQWLVNLEVLILSNNLLKKLPRGIGAL 433

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             L  LD+ +N + ++P E+  L  SL+ L L  N L S+ R+I
Sbjct: 434 RKLRVLDIEENKLESIPTEIEYLR-SLERLVLQSNCLGSLPRSI 476



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 196/420 (46%), Gaps = 48/420 (11%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N+++V+ +  I +  +L  L   +N +  +P  IG L  L+ LD+  N I ++P+ I  C
Sbjct: 188 NRISVVESG-IGNLKLLERLSLRENKIKILPRVIGQLVHLVTLDISHNHIENLPAEIGNC 246

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSL 126
             +    + +N + +LP  +G+L+ +  L L  NQL      +  C   +   ++  N++
Sbjct: 247 VHMTSLDLQHNDIPSLPDSIGRLTAMTRLGLRYNQLSSLPDSLANCS-GIDEFNIEGNNI 305

Query: 127 SGLPPE-IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 185
           + LP + +  +  L  L L+ N      +                  P  +  + +T   
Sbjct: 306 AELPEKLLSSLKNLTSLTLSRNKFEVFPAG-----------------PPKQFCQVNT--- 345

Query: 186 DLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASL 244
                            +E   +  IP  ++ +A  ++KL++  N +  LP +  S  SL
Sbjct: 346 ---------------FIMEHNRMQKIPFGVFNKAKYLSKLNVKDNQLTSLPLDFGSWISL 390

Query: 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 303
             L ++ N+I   P+ I   L +L  L L NN L+++P  G   +  L++LD+  N + S
Sbjct: 391 VELNVATNQISKLPEDI-QWLVNLEVLILSNNLLKKLPR-GIGALRKLRVLDIEENKLES 448

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
           +P    +  L  L+ L L+   L   P  I  L  +  L + +N L S+P+   N+ SL 
Sbjct: 449 IPTEIEY--LRSLERLVLQSNCLGSLPRSIGYLSSVTYLSVGENELVSVPQEIGNMESLE 506

Query: 364 ELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
           +L L+DN N+ +LP EL +L  SLQ + ++  PL ++   I+  G   V++YL+ + P N
Sbjct: 507 QLYLNDNENLQSLPYEL-VLCGSLQIMSIENCPLSALPSQIVAGGPSLVIQYLRLQGPYN 565



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 26/200 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTEL-----------------------IASKNLLNG 37
           +SKL+V+ N+LT L  +   SW  L EL                       I S NLL  
Sbjct: 367 LSKLNVKDNQLTSLPLDF-GSWISLVELNVATNQISKLPEDIQWLVNLEVLILSNNLLKK 425

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P  IG+L +L  LD+ +N++ SIP+ I    SL    + +N L +LP  +G LS +  L
Sbjct: 426 LPRGIGALRKLRVLDIEENKLESIPTEIEYLRSLERLVLQSNCLGSLPRSIGYLSSVTYL 485

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNN-SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
            +  N+L     E   +  L  L L++N +L  LP E+    +L+ + +   PL  L S 
Sbjct: 486 SVGENELVSVPQEIGNMESLEQLYLNDNENLQSLPYELVLCGSLQIMSIENCPLSALPSQ 545

Query: 156 LVNGPTPALLKYLRSRLPEN 175
           +V G    +++YLR + P N
Sbjct: 546 IVAGGPSLVIQYLRLQGPYN 565


>gi|418698174|ref|ZP_13259153.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762878|gb|EKR29037.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 430

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 183/372 (49%), Gaps = 51/372 (13%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ I  L  L +L L  NR+ ++P  I    +L E  + +N L+ LP E+GKL  L  L
Sbjct: 65  LPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRL 124

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL+ N+L    +E  +L+ L  L LS+N L+ LP E GK+  L++L L+ N L TL   +
Sbjct: 125 DLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEI 184

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                   L+ L++                              L+L+   L+ +  EI 
Sbjct: 185 ------GQLQNLQT------------------------------LNLKSNQLTTLFKEIE 208

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL----TSLSSLSCLK 272
           +   +  L+LS N +  LP E+    +L TL LS N++     AIL      L +L  L 
Sbjct: 209 QLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQL-----AILLIEVGKLQNLHTLN 263

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 331
           L +N L  +P +  K +  L  L+LS N + +LP       L +LQ+L L   QL     
Sbjct: 264 LSDNQLTTLPIEIGK-LQNLHTLNLSGNQLTTLP--IEIGKLQNLQDLNLHSNQLTTLSK 320

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           +I +L+ L+ L LS N L  +P+    L +L EL+L +N ++ALP E+G L+ +LQ L L
Sbjct: 321 EIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQ-NLQTLSL 379

Query: 392 DGNPLRSIRRTI 403
             N L +  + I
Sbjct: 380 YKNRLMTFPKEI 391



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 119/373 (31%), Positives = 171/373 (45%), Gaps = 43/373 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+L  L    I     L EL  S N L  +P+ IG L  L RLDL+ NR+  
Sbjct: 75  LQKLYLFDNRLKTLPKE-IGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 133

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L   Y+ +N L+ LP E GKL  L  L+L  NQL     E  QL+ L  L
Sbjct: 134 LPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTL 193

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L +N L+ L  EI ++  L+ L L+ N L TL         P  +  L++         
Sbjct: 194 NLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTL---------PIEIGKLQNL-------- 236

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                L+L    L+ +  E+ +   +  L+LS N +  LP E+ 
Sbjct: 237 -------------------HTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIG 277

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L TL LS N++   P  I   L +L  L L +N L  + S   + +  LQ L LSY
Sbjct: 278 KLQNLHTLNLSGNQLTTLPIEI-GKLQNLQDLNLHSNQLTTL-SKEIEQLKNLQTLSLSY 335

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +  LP+      L +LQEL L   QL   P +I +LQ L+ L L +N L + P+    
Sbjct: 336 NRLVILPK--EIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQ 393

Query: 359 LTSLTELDLSDNN 371
           L +L  L L  +N
Sbjct: 394 LKNLQTLYLGGHN 406



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 135/287 (47%), Gaps = 42/287 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + +L+LS  + + LP EI ++  L+KL L  N L+TL         P  +  L++   
Sbjct: 50  LNVRILNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTL---------PKEIGQLKNL-- 98

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                    +EL+L    L+ +P EI +   + +LDL  N +  
Sbjct: 99  -------------------------QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 133

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQTL LS N++   P      L +L  L L +N L  +P +    +  LQ
Sbjct: 134 LPIEIGKLQNLQTLYLSSNQLTTLPRES-GKLGNLQELNLSDNQLTTLPQE-IGQLQNLQ 191

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L+L  N + +L +      L +LQ L L   QL   P +I +LQ L  L+LS N L  +
Sbjct: 192 TLNLKSNQLTTLFK--EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAIL 249

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
                 L +L  L+LSDN ++ LP E+G L+ +L  L L GN L ++
Sbjct: 250 LIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQ-NLHTLNLSGNQLTTL 295



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 6/210 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L+L G N + +P EI +   + KL L  N ++ LP E+    +LQ L
Sbjct: 42  LTKALQNPLNVRILNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 101

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            LS N++   P  I   L +L  L L +N L  +P +  K +  LQ L LS N + +LP 
Sbjct: 102 NLSSNQLTILPKEI-GKLENLQRLDLYDNRLTILPIEIGK-LQNLQTLYLSSNQLTTLPR 159

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +LQEL L   QL   P +I +LQ L+ L+L  N L ++ +  + L +L  L+
Sbjct: 160 ES--GKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLN 217

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPL 396
           LSDN ++ LP E+G L+ +L  L L  N L
Sbjct: 218 LSDNQLTTLPIEIGKLQ-NLHTLNLSDNQL 246



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 27/180 (15%)

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           L+LS  +   LP E+    +LQ L L  N++K  P  I   L +L  L L +N L  +P 
Sbjct: 55  LNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEI-GQLKNLQELNLSSNQLTILPK 113

Query: 284 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
           +                            L +LQ L L   +L   P +I +LQ L+ L 
Sbjct: 114 E-------------------------IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLY 148

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           LS N L ++P     L +L EL+LSDN ++ LP E+G L+ +LQ L L  N L ++ + I
Sbjct: 149 LSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQ-NLQTLNLKSNQLTTLFKEI 207



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 4/111 (3%)

Query: 292 LQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
           ++IL+LS  N  +LP+      L +LQ+LYL   +L+  P +I +L+ L+ L+LS N L 
Sbjct: 52  VRILNLSGQNFTTLPK--EIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLT 109

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
            +P+    L +L  LDL DN ++ LP E+G L+ +LQ L L  N L ++ R
Sbjct: 110 ILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQ-NLQTLYLSSNQLTTLPR 159


>gi|195146072|ref|XP_002014014.1| GL24452 [Drosophila persimilis]
 gi|194102957|gb|EDW25000.1| GL24452 [Drosophila persimilis]
          Length = 655

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 194/396 (48%), Gaps = 21/396 (5%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK- 90
           +N L  +PE +G L +L  L +  N IL + +   G  +L E +  NN +S +P  + + 
Sbjct: 273 QNDLTCLPEDMGLLRKLQFLYIQHNDILEL-TDFEGNETLTELHASNNYISNIPVRMCEN 331

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LDL  N++ +   E C LR     D+SNNS+  LP  +  +  L  L + GNP+
Sbjct: 332 LPHLKVLDLRDNKITQLPDELCLLRNLNRLDVSNNSIDTLPVSLAALAHLISLQVEGNPI 391

Query: 150 RTLRSSLVNGPTPALLKYLRSR-LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 208
           +++R  ++   T  +L+ L+ R + +++D   S +         RL          G + 
Sbjct: 392 KSIRRDILQCGTSRILRTLQERSMAKSKDEGESDSG-----AGARLCGGQA-----GNDT 441

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA---SLQTLILSRNKIKDWPDAILTSL 265
           +A   + ++      L ++   I ++P E+   A    +  +  +RN+++  P+ +    
Sbjct: 442 AANYPDRYKLRHTRTLAVNLEEITDVPEEVFQLAQKEGVHVVDFARNQLRTVPNGLQHMQ 501

Query: 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQ 325
           + ++ L L +N + QVP    +   +  +   +  +  LP+   F  L  L+EL +   +
Sbjct: 502 NIVTELVLAHNRIGQVPQFISQFTRITLLNLSNNLLTDLPKE--FGVLNTLRELNIANNR 559

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
               P+ +  LQ L IL  S N +  +   G + +  L+ LDL +N+I  +PP LG L  
Sbjct: 560 FSFLPSGLYDLQGLEILIASDNHINELNVAGLQRMPRLSTLDLRNNDIDFIPPILGTLT- 618

Query: 385 SLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           ++  L L GNP R  R  IL +GT++++ YL+D++P
Sbjct: 619 NITHLELVGNPFRQPRHQILMKGTESIMSYLRDRVP 654



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 2/172 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D   N+L  + N L     ++TEL+ + N +  +P+ I   +R+  L+L  N +  +P 
Sbjct: 483 VDFARNQLRTVPNGLQHMQNIVTELVLAHNRIGQVPQFISQFTRITLLNLSNNLLTDLPK 542

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDL 121
                 +L E  + NN  S LP+ L  L  L  L    N + E  V   Q   RLS LDL
Sbjct: 543 EFGVLNTLRELNIANNRFSFLPSGLYDLQGLEILIASDNHINELNVAGLQRMPRLSTLDL 602

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            NN +  +PP +G +T +  L L GNP R  R  ++   T +++ YLR R+P
Sbjct: 603 RNNDIDFIPPILGTLTNITHLELVGNPFRQPRHQILMKGTESIMSYLRDRVP 654



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 169/373 (45%), Gaps = 73/373 (19%)

Query: 76  MGNNALSALPAELGKL------SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGL 129
           + N  L+++P  L  +      SK  TL+  S  +K+      Q+ L+ LDLS+N+LS +
Sbjct: 84  LSNKGLASVPDRLYDINEADAESKAATLEQLS--IKDEDAWWNQVPLTNLDLSSNALSHI 141

Query: 130 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 189
            P+I  + +L  L+L  N L  L         PA +  L   +                 
Sbjct: 142 SPKIENLQSLTVLILHDNALVDL---------PAEIGKLEKLM----------------- 175

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
              RL+V+  +       L  +P E++   E+  L++S N   EL P++S    L+ L  
Sbjct: 176 ---RLNVSRNK-------LCDLPRELYSLPELRHLNISYNEFSELNPDISDLHMLEFLDA 225

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 308
             N IK  P  I   L  L+ L L  N ++ +P D   ++  LQ LDL  N +  LPE+ 
Sbjct: 226 GHNSIKSLPGGI-GFLVRLTALLLPYNHIKDLPPD-LVNMRSLQRLDLMQNDLTCLPED- 282

Query: 309 PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF-KNLTSLTELDL 367
               L  LQ LY++   + E  TD    + L  L  S N + +IP    +NL  L  LDL
Sbjct: 283 -MGLLRKLQFLYIQHNDILEL-TDFEGNETLTELHASNNYISNIPVRMCENLPHLKVLDL 340

Query: 368 SDNNISALPPE----------------LGLLEPSLQA------LRLDGNPLRSIRRTILD 405
            DN I+ LP E                +  L  SL A      L+++GNP++SIRR IL 
Sbjct: 341 RDNKITQLPDELCLLRNLNRLDVSNNSIDTLPVSLAALAHLISLQVEGNPIKSIRRDILQ 400

Query: 406 RGTKAVLKYLKDK 418
            GT  +L+ L+++
Sbjct: 401 CGTSRILRTLQER 413



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 173/392 (44%), Gaps = 17/392 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N L+ +S   I +   LT LI   N L  +P  IG L +L+RL++ +N++  
Sbjct: 128 LTNLDLSSNALSHISPK-IENLQSLTVLILHDNALVDLPAEIGKLEKLMRLNVSRNKLCD 186

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  +     L    +  N  S L  ++  L  L  LD   N +K        L RL+ L
Sbjct: 187 LPRELYSLPELRHLNISYNEFSELNPDISDLHMLEFLDAGHNSIKSLPGGIGFLVRLTAL 246

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N +  LPP++  M +L++L L  N L  L   +        L    + + E  D E
Sbjct: 247 LLPYNHIKDLPPDLVNMRSLQRLDLMQNDLTCLPEDMGLLRKLQFLYIQHNDILELTDFE 306

Query: 180 ASTTKEDLITMATRLSVTS----------KELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
            + T  +L      +S             K L L    ++ +P E+     + +LD+S N
Sbjct: 307 GNETLTELHASNNYISNIPVRMCENLPHLKVLDLRDNKITQLPDELCLLRNLNRLDVSNN 366

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
           SI  LP  L++ A L +L +  N IK     IL   +S     L    + +   +G  D 
Sbjct: 367 SIDTLPVSLAALAHLISLQVEGNPIKSIRRDILQCGTSRILRTLQERSMAKSKDEGESDS 426

Query: 290 PM-LQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ---LRILDLS 345
               ++        +    P    L H + L +   ++ + P ++ +L Q   + ++D +
Sbjct: 427 GAGARLCGGQAGNDTAANYPDRYKLRHTRTLAVNLEEITDVPEEVFQLAQKEGVHVVDFA 486

Query: 346 QNSLQSIPEGFKNLTSL-TELDLSDNNISALP 376
           +N L+++P G +++ ++ TEL L+ N I  +P
Sbjct: 487 RNQLRTVPNGLQHMQNIVTELVLAHNRIGQVP 518


>gi|333983716|ref|YP_004512926.1| adenylate cyclase [Methylomonas methanica MC09]
 gi|333807757|gb|AEG00427.1| Adenylate cyclase [Methylomonas methanica MC09]
          Length = 504

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 189/407 (46%), Gaps = 46/407 (11%)

Query: 10  KLTVLSNNLIASWTM---LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 66
           K  + SNNL  +      LT L    N L  +P+ IG L  L  LDL  N++  +P SI 
Sbjct: 54  KYKIFSNNLSLNKDTILSLTHLDLRHNQLTEVPDYIGKLINLTCLDLSNNQLTKLPESIG 113

Query: 67  GCCSLAEFYMGNNALSALPAELGKLSKL-GTLDLHSNQLKE-------------YCVEAC 112
               L + Y+  N LS LP  +G+L+ L  +L L +NQLK+               +   
Sbjct: 114 NLTRLTDLYLQFNKLSDLPESIGRLTNLTNSLWLSNNQLKKLPDSIGNLSNLTGIILSGN 173

Query: 113 QL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 161
           QL            L+ L LS+N L+ LP  IG +T LR L L+GN L  L  S+ N   
Sbjct: 174 QLTELPESISKLINLTNLSLSDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKSIGN--- 230

Query: 162 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS------KELSLEGMN-LSAIPSE 214
             L K     L  N  +E      +LI + T LS+ S      K  S E  + L  +P  
Sbjct: 231 --LRKLSELSLAGNNLTEVPECIGNLINL-TSLSLGSGSRGVLKTKSPESNDTLKKLPES 287

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           I     +    +    + +LP  + +  +L+ L L  N++ + P++I  +L+ L  L+L 
Sbjct: 288 IGNLKMLKSFSIGSTQLTKLPESIGNLTNLRELFLENNQLIELPESI-GNLTKLDDLRLS 346

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
            N L ++P D   ++  L+ + L  N +  LPE+    ++ +L EL L   QL + P  +
Sbjct: 347 YNQLIKLP-DCIGNLTKLKRIILENNQLIDLPES--IGNMTNLVELRLSDNQLIKLPESL 403

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
             L +L  L L+ N L  IPE   NLT LT L + DN I  LP  +G
Sbjct: 404 GNLTKLEYLQLNHNRLVEIPEAIGNLTKLTRLSIGDNQIVELPESIG 450



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 182/382 (47%), Gaps = 28/382 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L ++ NKL+ L  ++     +   L  S N L  +P++IG+LS L  + L  N++  
Sbjct: 118 LTDLYLQFNKLSDLPESIGRLTNLTNSLWLSNNQLKKLPDSIGNLSNLTGIILSGNQLTE 177

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SIS   +L    + +N L+ LP  +G L+KL +L L  NQL +       LR LS L
Sbjct: 178 LPESISKLINLTNLSLSDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKSIGNLRKLSEL 237

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L+ N+L+ +P  IG +  L  L            SL +G        L+++ PE+ D  
Sbjct: 238 SLAGNNLTEVPECIGNLINLTSL------------SLGSGSRGV----LKTKSPESND-- 279

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
              T + L      L +  K  S+    L+ +P  I     + +L L  N + ELP  + 
Sbjct: 280 ---TLKKLPESIGNLKML-KSFSIGSTQLTKLPESIGNLTNLRELFLENNQLIELPESIG 335

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +   L  L LS N++   PD I  +L+ L  + L+NN L  +P +   ++  L  L LS 
Sbjct: 336 NLTKLDDLRLSYNQLIKLPDCI-GNLTKLKRIILENNQLIDLP-ESIGNMTNLVELRLSD 393

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +  LPE+    +L  L+ L L   +L E P  I  L +L  L +  N +  +PE   N
Sbjct: 394 NQLIKLPES--LGNLTKLEYLQLNHNRLVEIPEAIGNLTKLTRLSIGDNQIVELPESIGN 451

Query: 359 LTSLTELDLSDNNISALPPELG 380
           L+ LT L L  N I+ LP   G
Sbjct: 452 LSKLTRLCLHKNQITKLPESFG 473



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 48/92 (52%), Gaps = 3/92 (3%)

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL HL    LR  QL E P  I +L  L  LDLS N L  +PE   NLT LT+L L  N 
Sbjct: 71  SLTHLD---LRHNQLTEVPDYIGKLINLTCLDLSNNQLTKLPESIGNLTRLTDLYLQFNK 127

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           +S LP  +G L     +L L  N L+ +  +I
Sbjct: 128 LSDLPESIGRLTNLTNSLWLSNNQLKKLPDSI 159



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 45/76 (59%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I + T LT L    N +  +PE+IG+LS+L RL LH+N+I  +P S      L + Y+ +
Sbjct: 426 IGNLTKLTRLSIGDNQIVELPESIGNLSKLTRLCLHKNQITKLPESFGKLKKLKDLYLNS 485

Query: 79  NALSALPAELGKLSKL 94
           N +  LPAEL  L K+
Sbjct: 486 NPIKYLPAELSHLIKI 501



 Score = 45.1 bits (105), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 50/96 (52%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           + + T L  L  + N L  +PE IG+L++L RL +  N+I+ +P SI     L    +  
Sbjct: 403 LGNLTKLEYLQLNHNRLVEIPEAIGNLTKLTRLSIGDNQIVELPESIGNLSKLTRLCLHK 462

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 114
           N ++ LP   GKL KL  L L+SN +K    E   L
Sbjct: 463 NQITKLPESFGKLKKLKDLYLNSNPIKYLPAELSHL 498


>gi|455789506|gb|EMF41432.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 358

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 144/300 (48%), Gaps = 23/300 (7%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N L  +P+ I  L  L  L L+ N++ + P  I    SL + Y+ NN L+ LP E+G+
Sbjct: 58  SDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQ 117

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  L+L +NQLK    E  QL+ L  L L NN L+ L  EIGK+  L+ L L+ N L
Sbjct: 118 LQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQL 177

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMN 207
            T    +  G    L              E   +   L T    +    K   L L    
Sbjct: 178 TTFPKEI--GKLQNL-------------QELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQ 222

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+ IP+EI +  ++ +L+L  N +  +P E+    +LQ L LS N+ K  P      L +
Sbjct: 223 LTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIP-VEFGQLKN 281

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L LD N L  +P +  K +  L++L+L  N + ++P+      L +LQ LYLR  QL
Sbjct: 282 LKMLSLDANQLTALPKEIGK-LKNLKMLNLDANQLTTIPK--EIGQLQNLQTLYLRNNQL 338



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 152/326 (46%), Gaps = 43/326 (13%)

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
            L  LP ++G+L  L  LDL  NQL     E  QL+ L  L L+ N L+  P EI ++ +
Sbjct: 38  KLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKS 97

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L KL L+ N L  L         P  +  L++                            
Sbjct: 98  LHKLYLSNNQLTIL---------PVEIGQLQNL--------------------------- 121

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           +EL+L    L  I  EI +   + KL L  N +  L  E+    +L++L LS N++  +P
Sbjct: 122 QELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFP 181

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
             I   L +L  L L NN L   P +  K +  LQ L L  N + ++P       L  LQ
Sbjct: 182 KEI-GKLQNLQELYLSNNQLTTFPKEIGK-LQKLQWLGLGDNQLTTIPN--EIGKLQKLQ 237

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           EL L   QL   P +I +LQ L++L LS N  ++IP  F  L +L  L L  N ++ALP 
Sbjct: 238 ELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPK 297

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
           E+G L+ +L+ L LD N L +I + I
Sbjct: 298 EIGKLK-NLKMLNLDANQLTTIPKEI 322



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 107/212 (50%), Gaps = 4/212 (1%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L    L  +P +I +   +  LDLS N +  LP E+    +LQ L
Sbjct: 19  LTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 78

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 307
            L+ N++  +P  I   L SL  L L NN L  +P +    +  LQ L+L +N      +
Sbjct: 79  FLNYNQLTTFPKEI-EQLKSLHKLYLSNNQLTILPVE-IGQLQNLQELNL-WNNQLKTIS 135

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                L +LQ+LYL   QL     +I +LQ L+ L LS N L + P+    L +L EL L
Sbjct: 136 KEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYL 195

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           S+N ++  P E+G L+  LQ L L  N L +I
Sbjct: 196 SNNQLTTFPKEIGKLQ-KLQWLGLGDNQLTTI 226


>gi|456987322|gb|EMG22649.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 305

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 143/300 (47%), Gaps = 23/300 (7%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N L  +P+ I  L  L  L L+ N++ + P  I    SL + Y+ NN L+ LP E+G+
Sbjct: 5   SDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQ 64

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  L+L +NQLK    E  QL+ L  L L NN L+ L  EIGK+  L+ L L+ N L
Sbjct: 65  LQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQL 124

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMN 207
            T    +  G    L              E   +   L T    +    K   L L    
Sbjct: 125 TTFPKEI--GKLQNL-------------QELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQ 169

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+ IP+EI +  ++ +L+L  N +  +P E+    +LQ L LS N+ K  P      L +
Sbjct: 170 LTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIP-VEFGQLKN 228

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L LD N L  +P +  K +  L++L+L  N + ++P+      L +LQ LYLR  Q 
Sbjct: 229 LKMLSLDANQLTALPKEIGK-LKNLKMLNLDANQLTTIPK--EIGQLQNLQTLYLRNNQF 285



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 137/307 (44%), Gaps = 40/307 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+LT      I     L +L  S N L  +P  IG L  L  L+L  N++ +
Sbjct: 22  LQELFLNYNQLTTFPKE-IEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKT 80

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           I   I    +L + Y+ NN L+AL  E+GKL  L +L L +NQL  +  E  +L+ L  L
Sbjct: 81  ISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQEL 140

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LSNN L+  P EIGK+  L+ L L  N L T+ + +  G    L               
Sbjct: 141 YLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEI--GKLQKL--------------- 183

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              +EL+L+   L+ IP EI +   +  L LS N  + +P E  
Sbjct: 184 -------------------QELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFG 224

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+ L L  N++   P  I   L +L  L LD N L  +P +    +  LQ L L  
Sbjct: 225 QLKNLKMLSLDANQLTALPKEI-GKLKNLKMLNLDANQLTTIPKE-IGQLQNLQTLYLRN 282

Query: 300 NIASLPE 306
           N  S+ E
Sbjct: 283 NQFSIEE 289



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 140/289 (48%), Gaps = 23/289 (7%)

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
           +LDLS+N L  LP EI ++  L++L L  N L T          P  ++ L+S       
Sbjct: 1   MLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTF---------PKEIEQLKSL------ 45

Query: 178 SEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
            +   +   L  +   +      +EL+L    L  I  EI +   + KL L  N +  L 
Sbjct: 46  HKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALS 105

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +L++L LS N++  +P  I   L +L  L L NN L   P +  K +  LQ L
Sbjct: 106 KEIGKLQNLKSLFLSNNQLTTFPKEI-GKLQNLQELYLSNNQLTTFPKEIGK-LQKLQWL 163

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L  N + ++P       L  LQEL L   QL   P +I +LQ L++L LS N  ++IP 
Sbjct: 164 GLGDNQLTTIPN--EIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPV 221

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            F  L +L  L L  N ++ALP E+G L+ +L+ L LD N L +I + I
Sbjct: 222 EFGQLKNLKMLSLDANQLTALPKEIGKLK-NLKMLNLDANQLTTIPKEI 269


>gi|417780635|ref|ZP_12428396.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410779344|gb|EKR63961.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 542

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 192/416 (46%), Gaps = 45/416 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+L +L    I     L  L   KN L  +P+ IG L  L  L    NR+ +
Sbjct: 113 LEMLDLSENRLIILPAE-IGLLQSLQSLSLYKNKLTTLPKEIGQLQNLQELWSPGNRLTT 171

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    + NN L+ALP E+G+L  L TLDL  NQL     E  QL+ L  L
Sbjct: 172 LPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRDNQLIILPKEIGQLQNLQTL 231

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS------------LVNGPTPALLKY 167
           +L NN L+  P EIG++  L+ L L  N L T                L+N  +    K 
Sbjct: 232 NLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLRDLELLINPLSLKERKR 291

Query: 168 LRSRLPENEDSEASTTKEDL---ITMATRLSVTSKELSLEGMNLSAI-PSEIWEAGEITK 223
           ++   P +        K+ +   + +A    +   ELS+   + S + P EI +   +  
Sbjct: 292 IQKLFPNSNLDLREVAKDGVYHNLNLAQEEPLQVLELSIAYKSFSQLFPKEILKFRNLQS 351

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           L L       +P E+    +L+ L+L  N + + P  I   L +L  L L+ N L  +P 
Sbjct: 352 LYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTI-GQLRNLRGLNLEANLLESLPK 410

Query: 284 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
           +                          + L +L  L L + +L+  P +IL+L +L+ LD
Sbjct: 411 E-------------------------IARLRNLHTLRLHQNKLKTFPKEILQLGKLQKLD 445

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LS N L+ +PE  + L +L ELDLS N ++ LP E+  L+ +LQ L L+GN L ++
Sbjct: 446 LSANELKILPEKLERLQNLQELDLSHNQLTILPKEIAKLQ-NLQELHLNGNQLTTL 500



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 184/392 (46%), Gaps = 15/392 (3%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           NKLT L    I     L EL +  N L  +P+ IG L  L  L+L  NR+ ++P  I   
Sbjct: 144 NKLTTLPKE-IGQLQNLQELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQL 202

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 127
            +L    + +N L  LP E+G+L  L TL+L +N+L  +  E  QL+ L  L+L NN L+
Sbjct: 203 QNLQTLDLRDNQLIILPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLT 262

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
             P EIG++  LR L L  NPL       +    P     LR    +      +  +E+ 
Sbjct: 263 TFPKEIGQLQNLRDLELLINPLSLKERKRIQKLFPNSNLDLREVAKDGVYHNLNLAQEEP 322

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           + +   LS+  K  S         P EI +   +  L L       +P E+    +L+ L
Sbjct: 323 LQVL-ELSIAYKSFS------QLFPKEILKFRNLQSLYLYDCGFPTVPKEIGRLKNLKYL 375

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
           +L  N + + P  I   L +L  L L+ N L  +P +    +  L  L L  N + + P+
Sbjct: 376 LLGLNGLHNLPSTI-GQLRNLRGLNLEANLLESLPKE-IARLRNLHTLRLHQNKLKTFPK 433

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L  LQ+L L   +L+  P  + RLQ L+ LDLS N L  +P+    L +L EL 
Sbjct: 434 E--ILQLGKLQKLDLSANELKILPEKLERLQNLQELDLSHNQLTILPKEIAKLQNLQELH 491

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L+ N ++ LP E+G L+  L+ LRL  N   S
Sbjct: 492 LNGNQLTTLPSEIGFLK-KLKILRLYQNEFSS 522



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 181/400 (45%), Gaps = 40/400 (10%)

Query: 46  SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 105
           S++  L+L    + ++P  I    +L E Y+  N L A+P E+G+L  L TLDL  NQL 
Sbjct: 42  SKVRVLNLSGQELATLPKEIGQLQNLQELYLQWNQLIAIPKEIGQLQNLQTLDLRDNQLV 101

Query: 106 EYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164
            +  E  +L +L +LDLS N L  LP EIG + +L+ L L  N L TL   +        
Sbjct: 102 TFPKEMVELQKLEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTLPKEIGQLQNLQE 161

Query: 165 LKYLRSRLPENEDSEASTTKEDLITMA-TRLSVTSKE---------LSLEGMNLSAIPSE 214
           L    +RL               + +A  RL+   KE         L L    L  +P E
Sbjct: 162 LWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRDNQLIILPKE 221

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           I +   +  L+L  N +   P E+    +LQTL L  N++  +P  I   L +L  L+L 
Sbjct: 222 IGQLQNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEI-GQLQNLRDLELL 280

Query: 275 NNP-------------------LRQVPSDG-FKDIPM-----LQILDLSYNIASLPENPP 309
            NP                   LR+V  DG + ++ +     LQ+L+LS    S  +  P
Sbjct: 281 INPLSLKERKRIQKLFPNSNLDLREVAKDGVYHNLNLAQEEPLQVLELSIAYKSFSQLFP 340

Query: 310 FSSLP--HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
              L   +LQ LYL        P +I RL+ L+ L L  N L ++P     L +L  L+L
Sbjct: 341 KEILKFRNLQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIGQLRNLRGLNL 400

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
             N + +LP E+  L  +L  LRL  N L++  + IL  G
Sbjct: 401 EANLLESLPKEIARLR-NLHTLRLHQNKLKTFPKEILQLG 439



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 113/228 (49%), Gaps = 6/228 (2%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+ E  T  +  +T A +     + L+L G  L+ +P EI +   + +L L  N +  +P
Sbjct: 24  EEVEQGTYTD--LTKALQNPSKVRVLNLSGQELATLPKEIGQLQNLQELYLQWNQLIAIP 81

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQTL L  N++  +P   +  L  L  L L  N L  +P++      +  + 
Sbjct: 82  KEIGQLQNLQTLDLRDNQLVTFPKE-MVELQKLEMLDLSENRLIILPAEIGLLQSLQSLS 140

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
                + +LP+      L +LQEL+    +L   P +I +L+ L+ L+L+ N L ++P+ 
Sbjct: 141 LYKNKLTTLPKE--IGQLQNLQELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKE 198

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L +L  LDL DN +  LP E+G L+ +LQ L L  N L +  + I
Sbjct: 199 IGQLQNLQTLDLRDNQLIILPKEIGQLQ-NLQTLNLVNNRLTTFPKEI 245



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 1/104 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  NKL       I     L +L  S N L  +PE +  L  L  LDL  N++  
Sbjct: 418 LHTLRLHQNKLKTFPKE-ILQLGKLQKLDLSANELKILPEKLERLQNLQELDLSHNQLTI 476

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 104
           +P  I+   +L E ++  N L+ LP+E+G L KL  L L+ N+ 
Sbjct: 477 LPKEIAKLQNLQELHLNGNQLTTLPSEIGFLKKLKILRLYQNEF 520


>gi|345780094|ref|XP_539413.3| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Canis lupus familiaris]
          Length = 875

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 190/405 (46%), Gaps = 49/405 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M +L + GNKL V+S+  I ++  L  LI  KNLL  +PE I     L  L L  N+++ 
Sbjct: 366 MKELQLTGNKLEVISHK-IENFKELRILILDKNLLKEVPEKISHCVMLEYLSLSCNKLME 424

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA--CQLRLSV 118
           +P +I    +L +  +  N +  +P ++  L+ + +L+   N + +  +E   C+ +++ 
Sbjct: 425 LPKNIYKLKNLRKLRVNTNNIVRIPEDISHLNNIISLEFSGNIITDIPIEVKNCK-KITK 483

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           ++LS N +   P  +  + +L  L   GN +                    S +P     
Sbjct: 484 VELSYNKIMYFPVGLCALDSLYYLNFNGNYI--------------------SEIP----V 519

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           + S +K+ L             L L    L      +     +  LDL +N I+++PP +
Sbjct: 520 DISFSKQLL------------NLELNKNKLLIFSEHLCSLTNLEYLDLGKNQIRKIPPSI 567

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           S+  SLQ LIL  NK + +P  + T L +L  L L  N ++ VPSD   ++  +Q L++S
Sbjct: 568 SNMVSLQVLILCCNKFEVFPIEVCT-LENLQVLDLSINQIQNVPSD-ICNLKRIQKLNIS 625

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRM---QLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            N     P       L  L+EL + ++   +L   P ++  L QL+ LD+S N+++ IP 
Sbjct: 626 SNQFMYFP--IELCRLQSLEELNISQINGRKLTRLPEELSNLTQLKRLDISDNAIREIPR 683

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
               L SL  L+  +N IS LPP    L   LQ L L GN L ++
Sbjct: 684 NIGELRSLVSLNAYNNQISYLPPSFLCLN-DLQQLNLSGNNLTAL 727



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 181/428 (42%), Gaps = 79/428 (18%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
            S N ++ +P+ I  L  + +L L+ N I + PS +    +L    +  N L  +P  L 
Sbjct: 233 VSHNQISHIPKEISQLGNIRQLFLNNNCIENFPSGLKSLGNLEILSLAKNKLRHIPDTLS 292

Query: 90  KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI-------------GK 135
            L  L  L+L  NQL  +    C L +L  L L+ N +S LP EI              K
Sbjct: 293 GLKNLKVLNLEYNQLTIFPKVLCFLPKLISLILTGNLISSLPKEIRELKNLEKLLLDHNK 352

Query: 136 MTTL----------RKLLLTGNPLRTLRSSLVNGPTPALL---KYLRSRLPENEDSEAST 182
           +T L          ++L LTGN L  +   + N     +L   K L   +PE        
Sbjct: 353 LTFLAVEIFQLLKMKELQLTGNKLEVISHKIENFKELRILILDKNLLKEVPE-------- 404

Query: 183 TKEDLITMATRLSVTS----------------KELSLEGMNLSAIPSEIWEAGEITKLDL 226
            K     M   LS++                 ++L +   N+  IP +I     I  L+ 
Sbjct: 405 -KISHCVMLEYLSLSCNKLMELPKNIYKLKNLRKLRVNTNNIVRIPEDISHLNNIISLEF 463

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP---- 282
           S N I ++P E+ +C  +  + LS NKI  +P   L +L SL  L  + N + ++P    
Sbjct: 464 SGNIITDIPIEVKNCKKITKVELSYNKIMYFPVG-LCALDSLYYLNFNGNYISEIPVDIS 522

Query: 283 ------------------SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRR 323
                             S+    +  L+ LDL  N I  +P  P  S++  LQ L L  
Sbjct: 523 FSKQLLNLELNKNKLLIFSEHLCSLTNLEYLDLGKNQIRKIP--PSISNMVSLQVLILCC 580

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            +    P ++  L+ L++LDLS N +Q++P    NL  + +L++S N     P EL  L+
Sbjct: 581 NKFEVFPIEVCTLENLQVLDLSINQIQNVPSDICNLKRIQKLNISSNQFMYFPIELCRLQ 640

Query: 384 PSLQALRL 391
            SL+ L +
Sbjct: 641 -SLEELNI 647



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 172/390 (44%), Gaps = 41/390 (10%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           +N L  +P  I     L  L++  N+I  IP  IS   ++ + ++ NN +   P+ L  L
Sbjct: 212 ENGLLSLPPEIQLFHNLRILNVSHNQISHIPKEISQLGNIRQLFLNNNCIENFPSGLKSL 271

Query: 92  SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
             L  L L  N+L+        L+ L VL+L  N L+  P  +  +  L  L+LTGN + 
Sbjct: 272 GNLEILSLAKNKLRHIPDTLSGLKNLKVLNLEYNQLTIFPKVLCFLPKLISLILTGNLIS 331

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
           +L         P  ++ L++      D    T     + +     +  KEL L G  L  
Sbjct: 332 SL---------PKEIRELKNLEKLLLDHNKLT----FLAVEIFQLLKMKELQLTGNKLEV 378

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           I  +I    E+  L L +N ++E+P ++S C  L+ L LS NK+ + P  I   L +L  
Sbjct: 379 ISHKIENFKELRILILDKNLLKEVPEKISHCVMLEYLSLSCNKLMELPKNIY-KLKNLRK 437

Query: 271 LKLDNNPLRQVPSD---------------GFKDIPM-------LQILDLSYN-IASLPEN 307
           L+++ N + ++P D                  DIP+       +  ++LSYN I   P  
Sbjct: 438 LRVNTNNIVRIPEDISHLNNIISLEFSGNIITDIPIEVKNCKKITKVELSYNKIMYFP-- 495

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
               +L  L  L      + E P DI   +QL  L+L++N L    E   +LT+L  LDL
Sbjct: 496 VGLCALDSLYYLNFNGNYISEIPVDISFSKQLLNLELNKNKLLIFSEHLCSLTNLEYLDL 555

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLR 397
             N I  +PP +  +  SLQ L L  N   
Sbjct: 556 GKNQIRKIPPSISNM-VSLQVLILCCNKFE 584



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 123/280 (43%), Gaps = 36/280 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L+  GN ++ +  ++  S  +L  L  +KN L    E + SL+ L  LDL +N+I  IP 
Sbjct: 507 LNFNGNYISEIPVDISFSKQLLN-LELNKNKLLIFSEHLCSLTNLEYLDLGKNQIRKIPP 565

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
           SIS   SL    +  N     P E+  L  L  LDL  NQ++    + C L R+  L++S
Sbjct: 566 SISNMVSLQVLILCCNKFEVFPIEVCTLENLQVLDLSINQIQNVPSDICNLKRIQKLNIS 625

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N     P E+ ++ +L +L +          S +NG          +RLPE    E S 
Sbjct: 626 SNQFMYFPIELCRLQSLEELNI----------SQINGRK-------LTRLPE----ELSN 664

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                +T   RL ++          +  IP  I E   +  L+   N I  LPP      
Sbjct: 665 -----LTQLKRLDISDNA-------IREIPRNIGELRSLVSLNAYNNQISYLPPSFLCLN 712

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
            LQ L LS N +   P  I  +L SL  +  D+NPL + P
Sbjct: 713 DLQQLNLSGNNLTALPIGI-HNLFSLKEINFDDNPLLRPP 751



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 5/181 (2%)

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           ++L    +QE P ++    S++ L L  N+IK++  +    L  L  L L  N L  +P 
Sbjct: 161 VNLKAKGLQEFPKDILKSKSVKYLYLDGNQIKNFKGSDSGDLLGLEILSLQENGLLSLPP 220

Query: 284 DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 342
           +  +    L+IL++S+N I+ +P+    S L ++++L+L    +   P+ +  L  L IL
Sbjct: 221 E-IQLFHNLRILNVSHNQISHIPK--EISQLGNIRQLFLNNNCIENFPSGLKSLGNLEIL 277

Query: 343 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRT 402
            L++N L+ IP+    L +L  L+L  N ++  P  L  L P L +L L GN + S+ + 
Sbjct: 278 SLAKNKLRHIPDTLSGLKNLKVLNLEYNQLTIFPKVLCFL-PKLISLILTGNLISSLPKE 336

Query: 403 I 403
           I
Sbjct: 337 I 337



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 1/108 (0%)

Query: 6   VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
           + G KLT L   L ++ T L  L  S N +  +P  IG L  L+ L+ + N+I  +P S 
Sbjct: 650 INGRKLTRLPEEL-SNLTQLKRLDISDNAIREIPRNIGELRSLVSLNAYNNQISYLPPSF 708

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 113
                L +  +  N L+ALP  +  L  L  ++   N L    +E C+
Sbjct: 709 LCLNDLQQLNLSGNNLTALPIGIHNLFSLKEINFDDNPLLRPPMEICK 756


>gi|302820530|ref|XP_002991932.1| hypothetical protein SELMODRAFT_438 [Selaginella moellendorffii]
 gi|300140318|gb|EFJ07043.1| hypothetical protein SELMODRAFT_438 [Selaginella moellendorffii]
          Length = 620

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 139/416 (33%), Positives = 214/416 (51%), Gaps = 38/416 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 59
           +  LD+ GN  +      ++S + L+ +    NLL+G +P   G LS L  L L  N+  
Sbjct: 149 LQALDLSGNYFSGELPPDVSSMSNLSYVDLGGNLLSGHIPPQFGELSNLKYLTLAANQFT 208

Query: 60  -SIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS 117
            SIP  +    +L   Y+G N+L+  +P+ LG L+ L  LDL  N L     E+  L +S
Sbjct: 209 GSIPPELGQLANLEWLYLGYNSLTGSIPSALGSLATLKHLDLVHNNLTGAIPESLSLLVS 268

Query: 118 V--LDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           +  L L +NSLSG +PP++G+++ L  L L+ N L        +G  PA L        +
Sbjct: 269 LDTLFLYSNSLSGPIPPQLGQLSGLVSLDLSINAL--------SGEIPAELG-------D 313

Query: 175 NEDSEASTTKEDLITMATRLSVTS----KELSLEGMNLSA-IPSEIWE-AGEITKLDLSR 228
               E      + +T A   S+      + L+L   +LS  IP+E+   A  +T LDLS 
Sbjct: 314 LLGLELLNLFGNRLTGAIPSSLARLPRLRNLALWKNDLSGDIPAELGTYAPNLTTLDLSS 373

Query: 229 NSIQ-ELPPEL---SSCASLQTLILSRNKIKD-WPDAILTSLSSLSCLKLDNNPLRQVPS 283
           NS   ++PP L   S  + L+ LIL  N +    PD+I T+  SL  ++L++N L     
Sbjct: 374 NSFTGQIPPFLCMSSRTSQLRRLILFSNLLSGPIPDSIATNCLSLERIRLEDNLLSGSLP 433

Query: 284 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRIL 342
           D    +P L  LD+S N+ + P +  FS    LQ L++R  QL    P  + R  +L  L
Sbjct: 434 DTLTSMPRLTYLDISSNVLTGPLS--FSVNSPLQVLFVRHNQLSGPIPETVGRATKLVRL 491

Query: 343 DLSQNSLQS-IPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGNPL 396
           D+S N L   IP+  ++++SL+ELD+SDN+++  +P E+    P L +LRL GN L
Sbjct: 492 DMSHNFLSGRIPKELQDMSSLSELDVSDNHLTGPIPSEISNC-PRLVSLRLRGNHL 546



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 174/390 (44%), Gaps = 45/390 (11%)

Query: 29  IASKNLLNGMPETIGSLSRLIRLDL-HQNRILSIPSSISGCCSLAEFYMGNNALSA-LPA 86
           +   +L   +P  +GSL+ L  LDL H N   +IP S+S   SL   ++ +N+LS  +P 
Sbjct: 226 LGYNSLTGSIPSALGSLATLKHLDLVHNNLTGAIPESLSLLVSLDTLFLYSNSLSGPIPP 285

Query: 87  ELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLL 143
           +LG+LS L +LDL  N L           L L +L+L  N L+G +P  + ++  LR L 
Sbjct: 286 QLGQLSGLVSLDLSINALSGEIPAELGDLLGLELLNLFGNRLTGAIPSSLARLPRLRNLA 345

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE--DLITMATRLS------ 195
           L  N L        +G  PA L      L   + S  S T +    + M++R S      
Sbjct: 346 LWKNDL--------SGDIPAELGTYAPNLTTLDLSSNSFTGQIPPFLCMSSRTSQLRRLI 397

Query: 196 -------------VTSKELSLEGMNL------SAIPSEIWEAGEITKLDLSRNSIQELPP 236
                        + +  LSLE + L       ++P  +     +T LD+S N +   P 
Sbjct: 398 LFSNLLSGPIPDSIATNCLSLERIRLEDNLLSGSLPDTLTSMPRLTYLDISSNVLTG-PL 456

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPMLQIL 295
             S  + LQ L +  N++       +   + L  L + +N L  ++P +  +D+  L  L
Sbjct: 457 SFSVNSPLQVLFVRHNQLSGPIPETVGRATKLVRLDMSHNFLSGRIPKE-LQDMSSLSEL 515

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQ-SIP 353
           D+S N  + P     S+ P L  L LR   L    P  +  ++ L +LD+S N L  +IP
Sbjct: 516 DVSDNHLTGPIPSEISNCPRLVSLRLRGNHLSGHIPASLASVRLLGLLDISSNLLTGTIP 575

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLE 383
                + SL   + SDN ++   P+ G+L 
Sbjct: 576 PLLTAMPSLIFANFSDNRLTGPVPDTGVLS 605



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 5/149 (3%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-I 61
           L V  N+L+      +   T L  L  S N L+G +P+ +  +S L  LD+  N +   I
Sbjct: 467 LFVRHNQLSGPIPETVGRATKLVRLDMSHNFLSGRIPKELQDMSSLSELDVSDNHLTGPI 526

Query: 62  PSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSV 118
           PS IS C  L    +  N LS  +PA L  +  LG LD+ SN L      +      L  
Sbjct: 527 PSEISNCPRLVSLRLRGNHLSGHIPASLASVRLLGLLDISSNLLTGTIPPLLTAMPSLIF 586

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGN 147
            + S+N L+G  P+ G ++ L +    GN
Sbjct: 587 ANFSDNRLTGPVPDTGVLSALSQSSFRGN 615



 Score = 44.7 bits (104), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 138/335 (41%), Gaps = 70/335 (20%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 59
           +  LD+  N LT      ++    L  L    N L+G +P  +G LS L+ LDL  N + 
Sbjct: 245 LKHLDLVHNNLTGAIPESLSLLVSLDTLFLYSNSLSGPIPPQLGQLSGLVSLDLSINALS 304

Query: 60  S-IPSSISGCCSLAEFY-MGNNALSALPAELGKLSKLGTLDLHSNQLKEYC---VEACQL 114
             IP+ +     L      GN    A+P+ L +L +L  L L  N L       +     
Sbjct: 305 GEIPAELGDLLGLELLNLFGNRLTGAIPSSLARLPRLRNLALWKNDLSGDIPAELGTYAP 364

Query: 115 RLSVLDLSNNSLSG-LPPEI---GKMTTLRKLLLTGNPLRTLRSSLVNGPTP-----ALL 165
            L+ LDLS+NS +G +PP +    + + LR+L+L  N        L++GP P       L
Sbjct: 365 NLTTLDLSSNSFTGQIPPFLCMSSRTSQLRRLILFSN--------LLSGPIPDSIATNCL 416

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRL----------------SVTS--KELSLEGMN 207
              R RL   ED+  S +  D +T   RL                SV S  + L +    
Sbjct: 417 SLERIRL---EDNLLSGSLPDTLTSMPRLTYLDISSNVLTGPLSFSVNSPLQVLFVRHNQ 473

Query: 208 LSA-IPSEIWEAGEITKLDLSRN--------------SIQEL-----------PPELSSC 241
           LS  IP  +  A ++ +LD+S N              S+ EL           P E+S+C
Sbjct: 474 LSGPIPETVGRATKLVRLDMSHNFLSGRIPKELQDMSSLSELDVSDNHLTGPIPSEISNC 533

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
             L +L L  N +     A L S+  L  L + +N
Sbjct: 534 PRLVSLRLRGNHLSGHIPASLASVRLLGLLDISSN 568


>gi|418712114|ref|ZP_13272859.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791381|gb|EKR85057.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 379

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 162/346 (46%), Gaps = 42/346 (12%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P+ I  L  L  LDL  N+  ++P  I    +L E  + NN L  LP E+G+L  L
Sbjct: 60  LTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNL 119

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
            TL L  N+L  +  E  QL+ L  L+L  N L+ L  EIG++  L+KL L  N L TL 
Sbjct: 120 QTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDYNQLTTLL 179

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
             +        LK L+                              +L+L+   L A+P+
Sbjct: 180 QEI------GQLKNLQ------------------------------KLNLDKNRLKALPN 203

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           EI +   + +L LS N +  LP E+    +LQ LIL  N++   P  I   L +L  L  
Sbjct: 204 EIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEI-GQLQNLKLLYS 262

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
            NN L  +P +    +  LQ L LS+N + +LP+      L +LQELYL   QL   P +
Sbjct: 263 VNNELTILPQE-IGQLQKLQYLYLSHNQLTTLPK--EIGQLENLQELYLNDNQLTTLPKE 319

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           I +L+ L+      N L  +P+    L +L  L L++N +S+   E
Sbjct: 320 IGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLSSQEEE 365



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 156/334 (46%), Gaps = 63/334 (18%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L+L   ++ ++P  I    +L    + NN    LP E+G+L  L  L+L +NQLK    E
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKE 112

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L  L LS N L+  P EIG++  L+KL L  N L TL   +        LK L+
Sbjct: 113 IGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEI------GQLKNLQ 166

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                                         +L+L+   L+ +  EI +   + KL+L +N
Sbjct: 167 ------------------------------KLNLDYNQLTTLLQEIGQLKNLQKLNLDKN 196

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            ++ LP E+    +LQ L LS N++   P+ I   L +L  L L +N L  +P    K+I
Sbjct: 197 RLKALPNEIGQLQNLQELYLSNNQLTILPEEI-GQLKNLQALILGDNQLTILP----KEI 251

Query: 290 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
             LQ L L Y++ +                     +L   P +I +LQ+L+ L LS N L
Sbjct: 252 GQLQNLKLLYSVNN---------------------ELTILPQEIGQLQKLQYLYLSHNQL 290

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            ++P+    L +L EL L+DN ++ LP E+G L+
Sbjct: 291 TTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLK 324



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 115/255 (45%), Gaps = 38/255 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL+++ N+LT L    I     L +L    N L  + + IG L  L +L+L +NR+ +
Sbjct: 142 LQKLNLDYNQLTTLLQE-IGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKA 200

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L E Y+ NN L+ LP E+G+L  L  L L  NQL     E  QL+ L +L
Sbjct: 201 LPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLL 260

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
              NN L+ LP EIG++  L+ L L+ N L TL   +  G    L               
Sbjct: 261 YSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEI--GQLENL--------------- 303

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              +EL L    L+ +P EI +   +       N +  LP E+ 
Sbjct: 304 -------------------QELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIG 344

Query: 240 SCASLQTLILSRNKI 254
              +LQ L L+ N++
Sbjct: 345 QLQNLQWLKLNNNQL 359



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 115/217 (52%), Gaps = 6/217 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L+L    L+ +P EI +   +  LDL+ N  + LP E+    +LQ L
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQEL 99

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            L  N++K+ P  I   L +L  L L  N L   P +    +  LQ L+L YN + +L +
Sbjct: 100 NLWNNQLKNLPKEI-GQLQNLQTLILSVNRLTTFPQE-IGQLKNLQKLNLDYNQLTTLLQ 157

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +LQ+L L   QL     +I +L+ L+ L+L +N L+++P     L +L EL 
Sbjct: 158 --EIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELY 215

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           LS+N ++ LP E+G L+ +LQAL L  N L  + + I
Sbjct: 216 LSNNQLTILPEEIGQLK-NLQALILGDNQLTILPKEI 251


>gi|443652792|ref|ZP_21130908.1| small GTP-binding domain protein [Microcystis aeruginosa
           DIANCHI905]
 gi|443334234|gb|ELS48757.1| small GTP-binding domain protein [Microcystis aeruginosa
           DIANCHI905]
          Length = 875

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 116/203 (57%), Gaps = 6/203 (2%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           +++L L G NL+ IP EI     + +L+LS N I E+P  L+   SLQ L L  N+I++ 
Sbjct: 18  AEKLDLSGRNLTEIPPEIPHLTSLQELNLSNNQISEIPEALAQLTSLQRLYLKNNQIREI 77

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P+A LT L+SL  L L+NN + ++P +    +  LQ LDLS N I  +P+    + L  L
Sbjct: 78  PEA-LTHLTSLQVLYLNNNQISEIP-EALAQLTSLQRLDLSDNQIREIPK--ALAHLTSL 133

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           QEL L   Q+RE P  +  L  L +L L+ N ++ IPE   +LTSL  L LS+N I  +P
Sbjct: 134 QELDLSDNQIREIPEALAHLTSLELLFLNNNQIKEIPEALAHLTSLQVLYLSNNQIREIP 193

Query: 377 PELGLLEPSLQALRLDGNPLRSI 399
             L  L  SLQ L L  N +R I
Sbjct: 194 EALAQLT-SLQNLHLKNNQIREI 215



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 146/305 (47%), Gaps = 55/305 (18%)

Query: 115 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           R   LDLS  +L+ +PPEI  +T+L++L L+ N +  +  +L       L    R  L  
Sbjct: 17  RAEKLDLSGRNLTEIPPEIPHLTSLQELNLSNNQISEIPEALAQ-----LTSLQRLYLKN 71

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
           N+  E      + +T  T L V    L L    +S IP  + +   + +LDLS N I+E+
Sbjct: 72  NQIREIP----EALTHLTSLQV----LYLNNNQISEIPEALAQLTSLQRLDLSDNQIREI 123

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P  L+   SLQ L LS N+I++ P+A L  L+SL  L L+NN ++++P            
Sbjct: 124 PKALAHLTSLQELDLSDNQIREIPEA-LAHLTSLELLFLNNNQIKEIPE----------- 171

Query: 295 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
                           + L  LQ LYL   Q+RE P  + +L  L+ L L  N ++ IPE
Sbjct: 172 --------------ALAHLTSLQVLYLSNNQIREIPEALAQLTSLQNLHLKNNQIREIPE 217

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGT-KAVLK 413
              +L +L  L L +N I+ +PPE+         +R      +   +TILD G  +A+  
Sbjct: 218 ALAHLVNLKRLVLQNNPITNVPPEI---------IR------QGWGKTILDDGNPQAIFS 262

Query: 414 YLKDK 418
           YLK K
Sbjct: 263 YLKHK 267



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 122/276 (44%), Gaps = 39/276 (14%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           KLD+ G  LT +    I   T L EL  S N ++ +PE +  L+ L RL L  N+I  IP
Sbjct: 20  KLDLSGRNLTEIPPE-IPHLTSLQELNLSNNQISEIPEALAQLTSLQRLYLKNNQIREIP 78

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
            +++   SL   Y+ NN +S +P  L +L+ L  LDL  NQ++E       L  L  LDL
Sbjct: 79  EALTHLTSLQVLYLNNNQISEIPEALAQLTSLQRLDLSDNQIREIPKALAHLTSLQELDL 138

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
           S+N +  +P  +  +T+L  L L  N ++ +         P  L +L             
Sbjct: 139 SDNQIREIPEALAHLTSLELLFLNNNQIKEI---------PEALAHL------------- 176

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
                     T L V    L L    +  IP  + +   +  L L  N I+E+P  L+  
Sbjct: 177 ----------TSLQV----LYLSNNQIREIPEALAQLTSLQNLHLKNNQIREIPEALAHL 222

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
            +L+ L+L  N I + P  I+      + L  D NP
Sbjct: 223 VNLKRLVLQNNPITNVPPEIIRQGWGKTILD-DGNP 257



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 112/237 (47%), Gaps = 38/237 (16%)

Query: 47  RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 106
           R  +LDL    +  IP  I    SL E  + NN +S +P  L +L+ L  L L +NQ++E
Sbjct: 17  RAEKLDLSGRNLTEIPPEIPHLTSLQELNLSNNQISEIPEALAQLTSLQRLYLKNNQIRE 76

Query: 107 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
                  L  L VL L+NN +S +P  + ++T+L++L L+ N +R +         P  L
Sbjct: 77  IPEALTHLTSLQVLYLNNNQISEIPEALAQLTSLQRLDLSDNQIREI---------PKAL 127

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
            +L S                            +EL L    +  IP  +     +  L 
Sbjct: 128 AHLTSL---------------------------QELDLSDNQIREIPEALAHLTSLELLF 160

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           L+ N I+E+P  L+   SLQ L LS N+I++ P+A L  L+SL  L L NN +R++P
Sbjct: 161 LNNNQIKEIPEALAHLTSLQVLYLSNNQIREIPEA-LAQLTSLQNLHLKNNQIREIP 216



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 27/228 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +A  T L  L  S N +  +P+ +  L+ L  LDL  N+I  IP +++   SL   ++ N
Sbjct: 104 LAQLTSLQRLDLSDNQIREIPKALAHLTSLQELDLSDNQIREIPEALAHLTSLELLFLNN 163

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N +  +P  L  L+ L  L L +NQ++E      QL  L  L L NN +  +P  +  + 
Sbjct: 164 NQIKEIPEALAHLTSLQVLYLSNNQIREIPEALAQLTSLQNLHLKNNQIREIPEALAHLV 223

Query: 138 TLRKLLLTGNPLRTL----------RSSLVNGPTPALLKYLRS---RLPENE-----DSE 179
            L++L+L  NP+  +          ++ L +G   A+  YL+    + P NE       E
Sbjct: 224 NLKRLVLQNNPITNVPPEIIRQGWGKTILDDGNPQAIFSYLKHKGEKRPLNELKVLLVGE 283

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIP--------SEIWEAG 219
               K  L+      +  S E    G+N+   P          IW+ G
Sbjct: 284 GDVGKTSLLKRLLHNTFNSGEPKTPGINIEKWPLPQKPDIRLNIWDFG 331


>gi|24215147|ref|NP_712628.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074466|ref|YP_005988783.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196215|gb|AAN49646.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458255|gb|AER02800.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 498

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 188/424 (44%), Gaps = 48/424 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G KLT L    I     L EL    NLL  +P+ IG L  L  LDL  N++ + P+
Sbjct: 53  LNLSGEKLTALPKE-IGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPA 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L    +  N L  LP E+G+L  L  L L+ N+L  +  E  QL+ L  L LS
Sbjct: 112 VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++  L+ L L  N    L   +        L+ L++          + 
Sbjct: 172 ENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEI------GQLQNLQT---------LNL 216

Query: 183 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
           +   L T+   +      +EL L    L+  P EI +   +  L    N +  LP E+  
Sbjct: 217 SDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQ 276

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-------------------LRQV 281
             +LQTL L  N++  +P  I   L +L  L+L  NP                   LR+V
Sbjct: 277 LQNLQTLNLVNNRLTVFPKEI-GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREV 335

Query: 282 PSDG-FKDIPM-----LQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDI 333
             +G ++++ +     L++ +LS       ++ P       +L+ L L        P +I
Sbjct: 336 AENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEI 395

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
            RL+ L+ L L  N L++IP     L +L  L+L  N +  LP E+G L  +LQ L L  
Sbjct: 396 SRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLR-NLQKLSLHQ 454

Query: 394 NPLR 397
           N L+
Sbjct: 455 NTLK 458



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 145/289 (50%), Gaps = 29/289 (10%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS   L+ LP EIG++  L++L L  N                LL  L   + 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWN----------------LLTVLPKEIG 91

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSR 228
           + E+ +    +++   +AT  +V  +   LE ++LS      +P+EI     +  L L +
Sbjct: 92  QLENLQELDLRDN--QLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYK 149

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N +   P E+    +LQ L LS N++   P  I   L +L  L L +N    +P +    
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI-GQLKNLQTLDLQDNQFTILPKE-IGQ 207

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  LQ L+LS N +A+LP       L +LQELYLR  +L   P +I +LQ L++L   +N
Sbjct: 208 LQNLQTLNLSDNQLATLP--VEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPEN 265

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L ++P+    L +L  L+L +N ++  P E+G L+ +LQ L L  NPL
Sbjct: 266 RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQ-NLQDLELLMNPL 313



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 120/229 (52%), Gaps = 8/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           E+ E  T ++  +T A +  +  + L+L G  L+A+P EI +   + +L+L  N +  LP
Sbjct: 30  EEVEPGTYRD--LTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L L  N++  +P A++  L  L  L L  N L  +P++    +  LQ L
Sbjct: 88  KEIGQLENLQELDLRDNQLATFP-AVIVELQKLESLDLSENRLIILPNE-IGRLQNLQDL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            L  N + + P+      L +LQ+L+L   +L   P +I +L+ L+ LDL  N    +P+
Sbjct: 146 GLYKNKLTTFPK--EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L  L+LSDN ++ LP E+G L+ +LQ L L  N L    + I
Sbjct: 204 EIGQLQNLQTLNLSDNQLATLPVEIGQLQ-NLQELYLRNNRLTVFPKEI 251


>gi|301104447|ref|XP_002901308.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262100783|gb|EEY58835.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 458

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 182/412 (44%), Gaps = 23/412 (5%)

Query: 2   SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 61
            KL V    L  L   ++   T LTEL      L  +P + GSL  L RL L  N++ ++
Sbjct: 24  GKLAVRDCDLFALPPEVLERATHLTELRLEHAKLKHLPASFGSLILLERLSLAGNKLETL 83

Query: 62  PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 120
           P S      L E  +  NALS+L      L  L  L ++ N LK+   E   L+ L VLD
Sbjct: 84  PLSFHELQRLEELDLSCNALSSLLGNFCNLGSLRRLCMYENALKKLPREFGALKSLEVLD 143

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           + NN+L  LP     +T+L +L L+ N LR L  +  N     +    R+ L E      
Sbjct: 144 MHNNALKRLPKSFPCLTSLTRLELSRNKLRKLPQAFGNLSALLICNLGRNMLRE------ 197

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                D   M   L V    LSL    L  +P+   E   +  L L+ N I+  P ++SS
Sbjct: 198 ---LPDYFGMLGALEV----LSLSYNALYKLPASFAELTGLKNLSLTGNRIECFPAQISS 250

Query: 241 CASLQTLILSRNKIKDW---PDAILTSLSSLSCLKL------DNNPLRQVPSDGFKDIPM 291
             +L TL  + N+++ W     +IL   +  S  KL      D N +   PS+    +  
Sbjct: 251 LTALVTLTYAENRLRLWRPGEKSILDEEAPESVYKLGTSDEEDTNEVGITPSNPLVTLAA 310

Query: 292 LQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           +Q LDLS N      +  +  L  L  L L R +L   P ++  L +L+ LD++ N L++
Sbjct: 311 IQYLDLSDNALEYLPSRGWGRLETLLHLKLSRNRLHLIPPEVGSLPRLQRLDIAANKLKT 370

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           +P    +  SL  LD   N +  LP   G  E  ++ +      LR + R+I
Sbjct: 371 LPSSLFSNKSLAYLDAQQNTLQELPDNAGECEALVRLVLTKNRDLRGLPRSI 422


>gi|398341320|ref|ZP_10526023.1| cytoplasmic membrane protein [Leptospira kirschneri serovar Bim
           str. 1051]
          Length = 353

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 106/298 (35%), Positives = 147/298 (49%), Gaps = 28/298 (9%)

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV---NGPTPALLKYLRSRLPE 174
           VLDLS  +L+  P EIG+   L+KL L+GN L  L   +V   N    +L     + LP+
Sbjct: 45  VLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNLPK 104

Query: 175 NEDSEASTTKEDLITMATRLSVTSKEL----SLEGMNLS-----AIPSEIWEAGEITKLD 225
             +   S    DL     +L    KE+    +LE +NLS     A+P EI +   +  L 
Sbjct: 105 EIEQLKSLKNLDL--FRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILK 162

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           L  N I  LP E+     L+ LIL  N+ K+ P   L  L +L  L L  N L  +P   
Sbjct: 163 LDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEAL-QLKNLQKLNLSENQLVSIP--- 218

Query: 286 FKDIPMLQ-----ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
            K+I  LQ     +LD +  I  LP       L +LQELYL   Q    P +I +L+ LR
Sbjct: 219 -KEILQLQNLRDLVLDRNQ-ITILP--TEVLQLQNLQELYLSENQFTSLPKEIDKLKNLR 274

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
            L L  N L ++P+    L +L  L+L +N ++ LP E+G L+ +LQ L LD NPL S
Sbjct: 275 WLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQLK-NLQRLELDSNPLSS 331



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 138/292 (47%), Gaps = 42/292 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+ GN+LTVLS   I     L EL    N L  +P+ I  L  L  LDL +N++++
Sbjct: 66  LQKLDLSGNELTVLSKE-IVQLQNLQELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLMT 124

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL----KEYCVEACQLRL 116
           +P  +    +L +  +  N L+A+P E+G+L  L  L L  NQ+    KE  +E  Q  L
Sbjct: 125 VPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVSLPKE--IEGLQ-EL 181

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL-LKYLRSRLPEN 175
             L L NN    +P E  ++  L+KL L+ N        LV+ P   L L+ LR      
Sbjct: 182 KELILENNRFKNVPGEALQLKNLQKLNLSEN-------QLVSIPKEILQLQNLR------ 228

Query: 176 EDSEASTTKEDLITMATRLSV---------TSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                     DL+    ++++           +EL L     +++P EI +   +  L L
Sbjct: 229 ----------DLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSL 278

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
             N +  LP E+    +LQ L L  N++ + P  I   L +L  L+LD+NPL
Sbjct: 279 KNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEI-GQLKNLQRLELDSNPL 329



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 142/319 (44%), Gaps = 42/319 (13%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L   P+ IG    L +LDL  N +  +   I    +L E  + +N L+ LP E+ +L  L
Sbjct: 53  LTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNLPKEIEQLKSL 112

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDL  NQL     E   L+ L  L+LS N L+ +P EIG++  L+ L L  N + +L 
Sbjct: 113 KNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVSL- 171

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
                   P  ++ L+                             KEL LE      +P 
Sbjct: 172 --------PKEIEGLQEL---------------------------KELILENNRFKNVPG 196

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           E  +   + KL+LS N +  +P E+    +L+ L+L RN+I   P  +L  L +L  L L
Sbjct: 197 EALQLKNLQKLNLSENQLVSIPKEILQLQNLRDLVLDRNQITILPTEVL-QLQNLQELYL 255

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
             N    +P +    +  L+ L L  N + +LP+      L +LQ L L   QL   P +
Sbjct: 256 SENQFTSLPKE-IDKLKNLRWLSLKNNRLTTLPK--EIGQLKNLQRLELGNNQLTNLPKE 312

Query: 333 ILRLQQLRILDLSQNSLQS 351
           I +L+ L+ L+L  N L S
Sbjct: 313 IGQLKNLQRLELDSNPLSS 331



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 115/239 (48%), Gaps = 27/239 (11%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A + S   + L L   NL++ P EI +   + KLDLS N +  L  E+    +LQ L
Sbjct: 33  LTKALQNSSNVRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQEL 92

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-------------------KD 288
            L  NK+ + P  I   L SL  L L  N L  VP +                     K+
Sbjct: 93  SLHSNKLTNLPKEI-EQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKE 151

Query: 289 IPM---LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
           I     LQIL L +N I SLP+      L  L+EL L   + +  P + L+L+ L+ L+L
Sbjct: 152 IGQLKNLQILKLDHNQIVSLPK--EIEGLQELKELILENNRFKNVPGEALQLKNLQKLNL 209

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           S+N L SIP+    L +L +L L  N I+ LP E+  L+ +LQ L L  N   S+ + I
Sbjct: 210 SENQLVSIPKEILQLQNLRDLVLDRNQITILPTEVLQLQ-NLQELYLSENQFTSLPKEI 267


>gi|260826181|ref|XP_002608044.1| hypothetical protein BRAFLDRAFT_74993 [Branchiostoma floridae]
 gi|229293394|gb|EEN64054.1| hypothetical protein BRAFLDRAFT_74993 [Branchiostoma floridae]
          Length = 997

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 173/377 (45%), Gaps = 25/377 (6%)

Query: 44  SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSN 102
           SL    +L L    +  +PS ++    L    +G N L  LP+     L+ LG LDL  N
Sbjct: 24  SLEEQWQLSLWDKGLERVPSELTQLAELHVLDLGGNNLKELPSGFSHYLTNLGVLDLKKN 83

Query: 103 QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 161
               +  +   L  ++ LDLS N L  +P EI ++  L+K  L+ N ++ L   +     
Sbjct: 84  NFASFPEQILDLASVTELDLSYNKLKSVPQEINQLQRLQKFFLSQNYIQVLPQGICE--- 140

Query: 162 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAG 219
             LL+            E   +   L  +  +     +   L L+   +  IP +++E  
Sbjct: 141 LFLLE------------ELDISYNYLTYLPVKFGQLKRLRTLDLDHNKIPYIPQQVFELR 188

Query: 220 EITKLDLSRNSI--QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
           E+ + D S N+     LP  ++   +LQ L LS N +   P+ I   L  L  L LDNN 
Sbjct: 189 ELVEFDFSHNTAISGPLPCNVAFLTNLQVLWLSSNGLTLLPNCI-KDLVLLEELILDNNK 247

Query: 278 LRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           L  +P D F+ +  +++L+L +N   +  +   + L  ++EL+L R +L   P +I  L+
Sbjct: 248 LHNLPCD-FEHLQRVKVLNLGFNCYEIFPHAVLA-LNRVEELFLSRNKLSHIPEEIGLLE 305

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
            LR+L L  N+++SIP+    L ++ EL +  N +  LP   G L  +L  L +  NPL 
Sbjct: 306 HLRVLWLDHNNVESIPDSITKLVNMEELSVQGNRLKCLPEGFGKLS-NLDCLDVRENPLL 364

Query: 398 SIRRTILDRGTKAVLKY 414
                +   G KA+  +
Sbjct: 365 QPPLDVCKNGVKAIAAF 381



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 157/354 (44%), Gaps = 24/354 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ GN L  L +      T L  L   KN     PE I  L+ +  LDL  N++ S+P 
Sbjct: 54  LDLGGNNLKELPSGFSHYLTNLGVLDLKKNNFASFPEQILDLASVTELDLSYNKLKSVPQ 113

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I+    L +F++  N +  LP  + +L  L  LD+  N L    V+  QL RL  LDL 
Sbjct: 114 EINQLQRLQKFFLSQNYIQVLPQGICELFLLEELDISYNYLTYLPVKFGQLKRLRTLDLD 173

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPENEDS 178
           +N +  +P ++ ++  L +   + N       + ++GP P  + +L +     L  N  +
Sbjct: 174 HNKIPYIPQQVFELRELVEFDFSHN-------TAISGPLPCNVAFLTNLQVLWLSSNGLT 226

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                 +DL+ +        +EL L+   L  +P +      +  L+L  N  +  P  +
Sbjct: 227 LLPNCIKDLVLL--------EELILDNNKLHNLPCDFEHLQRVKVLNLGFNCYEIFPHAV 278

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
            +   ++ L LSRNK+   P+ I   L  L  L LD+N +  +P    K + M ++    
Sbjct: 279 LALNRVEELFLSRNKLSHIPEEI-GLLEHLRVLWLDHNNVESIPDSITKLVNMEELSVQG 337

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
             +  LPE   F  L +L  L +R   L + P D+ +   ++ +   Q  LQ +
Sbjct: 338 NRLKCLPEG--FGKLSNLDCLDVRENPLLQPPLDVCK-NGVKAIAAFQEELQRV 388


>gi|260819403|ref|XP_002605026.1| hypothetical protein BRAFLDRAFT_124131 [Branchiostoma floridae]
 gi|229290356|gb|EEN61036.1| hypothetical protein BRAFLDRAFT_124131 [Branchiostoma floridae]
          Length = 667

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 181/430 (42%), Gaps = 65/430 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL ++ N LT L   L  + T L  L    N L  +P   G+L+ L  L   +N +  
Sbjct: 65  VEKLILDHNSLTFLPGELCHTLTHLCVLSVMGNDLETLPTLFGNLTLLRELHAGENCLQE 124

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------ 114
           +P S S    L   Y+  N L  LP++ G L  L TL +  N LK+       L      
Sbjct: 125 LPDSFSDLKDLRLLYLTGNELRTLPSDFGHLEHLETLMIDENHLKKLPKTFGSLRRLERF 184

Query: 115 ------------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
                             RL +L+LS N LS LP   G +  L+++ L+GN L  L   L
Sbjct: 185 DASNNKLETLPESFGGLSRLKILNLSTNKLSCLPESFGDLPQLQEVELSGNSLSFLTKDL 244

Query: 157 VNGPTPALLKYLRSRLPE--------NEDSEASTTKEDLI------TMATRLSVTSKELS 202
            +      L    + L E        +   E S     L+      +   R   T + L 
Sbjct: 245 KSSHCLRKLYVDNNVLKELPPWVGHLSSIQEMSLRDNKLMNQPLPESFPARSGRTLRLLD 304

Query: 203 LEGMNLSAIPSEIWEAGEITKL-------DLSRNSIQE------LPPELSSCASLQTLIL 249
           L G  ++A+P+ + + G +  L       +L R   Q       LP        L+TL L
Sbjct: 305 LSGNFITALPASLGQLGSLESLHLGSAIGELERRHFQNGNWLCALPENFGRLRHLKTLHL 364

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP 309
             N++   P +   SL SL  L +  N L+++P D F ++  LQ+         LP N  
Sbjct: 365 DENQLTHLPGSF-GSLGSLEFLDVGQNWLKELP-DSFCELSNLQL---------LPSN-- 411

Query: 310 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
           F  L  L +L L    L E P     L+QLR LDL  N L+ +P   K+LTS+T LD+  
Sbjct: 412 FGRLSSLVDLRLDNNMLGELPESFAELRQLRTLDLFCNELREVPGALKHLTSITRLDMDK 471

Query: 370 NNISALPPEL 379
           N  S LPPEL
Sbjct: 472 NKFS-LPPEL 480



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 166/385 (43%), Gaps = 62/385 (16%)

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQLR-LS 117
           S P S+     + +  + +N+L+ LP EL   L+ L  L +  N L+        L  L 
Sbjct: 54  SFPESVLNLTHVEKLILDHNSLTFLPGELCHTLTHLCVLSVMGNDLETLPTLFGNLTLLR 113

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS------- 170
            L    N L  LP     +  LR L LTGN LRTL S          L++L +       
Sbjct: 114 ELHAGENCLQELPDSFSDLKDLRLLYLTGNELRTLPSDF------GHLEHLETLMIDENH 167

Query: 171 --RLPEN-------EDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAG 219
             +LP+        E  +AS  K  L T+       S  K L+L    LS +P    +  
Sbjct: 168 LKKLPKTFGSLRRLERFDASNNK--LETLPESFGGLSRLKILNLSTNKLSCLPESFGDLP 225

Query: 220 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
           ++ +++LS NS+  L  +L S   L+ L +  N +K+ P  +   LSS+  + L +N L 
Sbjct: 226 QLQEVELSGNSLSFLTKDLKSSHCLRKLYVDNNVLKELPPWV-GHLSSIQEMSLRDNKLM 284

Query: 280 QVP-SDGF--KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL---------RRMQ- 325
             P  + F  +    L++LDLS N I +LP +     L  L+ L+L         R  Q 
Sbjct: 285 NQPLPESFPARSGRTLRLLDLSGNFITALPAS--LGQLGSLESLHLGSAIGELERRHFQN 342

Query: 326 ---LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN------------ 370
              L   P +  RL+ L+ L L +N L  +P  F +L SL  LD+  N            
Sbjct: 343 GNWLCALPENFGRLRHLKTLHLDENQLTHLPGSFGSLGSLEFLDVGQNWLKELPDSFCEL 402

Query: 371 -NISALPPELGLLEPSLQALRLDGN 394
            N+  LP   G L  SL  LRLD N
Sbjct: 403 SNLQLLPSNFGRLS-SLVDLRLDNN 426



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 133/312 (42%), Gaps = 50/312 (16%)

Query: 126 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 185
           LS  P  +  +T + KL+L  N L  L   L +  T   +               S    
Sbjct: 52  LSSFPESVLNLTHVEKLILDHNSLTFLPGELCHTLTHLCV--------------LSVMGN 97

Query: 186 DLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
           DL T+ T     +  +EL      L  +P    +  ++  L L+ N ++ LP +      
Sbjct: 98  DLETLPTLFGNLTLLRELHAGENCLQELPDSFSDLKDLRLLYLTGNELRTLPSDFGHLEH 157

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 302
           L+TL++  N +K  P     SL  L      NN L  +P + F  +  L+IL+LS N ++
Sbjct: 158 LETLMIDENHLKKLP-KTFGSLRRLERFDASNNKLETLP-ESFGGLSRLKILNLSTNKLS 215

Query: 303 SLPENPPFSSLPHLQE-----------------------LYLRRMQLREAPTDILRLQQL 339
            LPE+  F  LP LQE                       LY+    L+E P  +  L  +
Sbjct: 216 CLPES--FGDLPQLQEVELSGNSLSFLTKDLKSSHCLRKLYVDNNVLKELPPWVGHLSSI 273

Query: 340 RILDLSQNSL--QSIPEGF--KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           + + L  N L  Q +PE F  ++  +L  LDLS N I+ALP  LG L  SL++L L G+ 
Sbjct: 274 QEMSLRDNKLMNQPLPESFPARSGRTLRLLDLSGNFITALPASLGQL-GSLESLHL-GSA 331

Query: 396 LRSIRRTILDRG 407
           +  + R     G
Sbjct: 332 IGELERRHFQNG 343



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 5/195 (2%)

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           PS   E  E   L L    +   P  + +   ++ LIL  N +   P  +  +L+ L  L
Sbjct: 33  PSNNVEKEENHLLCLKSLDLSSFPESVLNLTHVEKLILDHNSLTFLPGELCHTLTHLCVL 92

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
            +  N L  +P+  F ++ +L+ L    N +  LP++  FS L  L+ LYL   +LR  P
Sbjct: 93  SVMGNDLETLPT-LFGNLTLLRELHAGENCLQELPDS--FSDLKDLRLLYLTGNELRTLP 149

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
           +D   L+ L  L + +N L+ +P+ F +L  L   D S+N +  LP   G L   L+ L 
Sbjct: 150 SDFGHLEHLETLMIDENHLKKLPKTFGSLRRLERFDASNNKLETLPESFGGLS-RLKILN 208

Query: 391 LDGNPLRSIRRTILD 405
           L  N L  +  +  D
Sbjct: 209 LSTNKLSCLPESFGD 223



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 106/280 (37%), Gaps = 60/280 (21%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP----- 62
           GN L  L  N       L  L   +N L  +P + GSL  L  LD+ QN +  +P     
Sbjct: 343 GNWLCALPEN-FGRLRHLKTLHLDENQLTHLPGSFGSLGSLEFLDVGQNWLKELPDSFCE 401

Query: 63  --------SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 114
                   S+     SL +  + NN L  LP    +L +L TLDL  N+L+E       L
Sbjct: 402 LSNLQLLPSNFGRLSSLVDLRLDNNMLGELPESFAELRQLRTLDLFCNELREVPGALKHL 461

Query: 115 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL---------RTLRSSL-------- 156
             ++ LD+  N  S LPPE+      +      +P          R  R+ +        
Sbjct: 462 TSITRLDMDKNKFS-LPPELVPNIIFKPTYAARDPRLKDTWRGRNRADRNKVEVVKLEPL 520

Query: 157 ----------VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS---L 203
                      +GP P     LR  + +              +M+   S TS+E S   +
Sbjct: 521 PDEEEEVEDEKDGPIPWNDSILRQAMAK--------------SMSLWRSHTSEEGSHTRV 566

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
           EG +     S   E G  T++D S  S+ E PP  +S  S
Sbjct: 567 EGSHTKVEGSYTTEEGSHTRVDGSHTSVDEGPPAFNSQFS 606


>gi|428171499|gb|EKX40415.1| hypothetical protein GUITHDRAFT_61328, partial [Guillardia theta
           CCMP2712]
          Length = 621

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 193/414 (46%), Gaps = 29/414 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L++  N++  L   +      LT L  S N +  +P  I  LS L +L +  N +  
Sbjct: 102 LTRLNISNNRILRLPAEIGMLERNLTSLSLSNNRIQSLPSNISKLSNLTKLCITANHVEK 161

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P +I+   SL+     NN +   P +LG L+ +  L L+ N L     +   L +L +L
Sbjct: 162 LPDAIAHLTSLSHLEADNNKVVTFPKKLGNLAGMKVLSLNHNFLDSLPADIYHLTKLQIL 221

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDS 178
           D+ N  L  +P E+ +   L  L L+GN L  +  ++       +L +L+   L  N   
Sbjct: 222 DMCNFMLDTVPKEVFQKLNLENLYLSGNILNNIDKNI------GMLVHLKQIFLVHNRLK 275

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPE 237
           +   +   L+ +        + L L+    S IP  I++   + KL +S N ++ EL PE
Sbjct: 276 DLPASFGTLVDL--------QLLMLDHNRFSIIPQCIFKLKNLLKLTISFNDLKGELSPE 327

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           + S   L+ L L+ N +   PD I     +L  + L +N L  +P +    +  L++LD+
Sbjct: 328 VGSLQLLEILWLNNNSLDVLPDDI-GKCHNLKEMCLKHNRLYHLP-ETMMFLSGLRLLDV 385

Query: 298 SYNIAS---LPENPPFSSLPHLQELYLR-----RMQLREAPTDILRLQQLRILDLSQNSL 349
           SYN  S   LP+     +L  +QEL L        ++   PT I ++  L  L L+ N L
Sbjct: 386 SYNALSTLCLPQQ--LGALTAVQELMLEGNMIDATEIDSIPTPIFQMSHLVSLFLADNQL 443

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             IPE    LT+L  LD+S N + +LP E+  L   L  L L  N +  I  +I
Sbjct: 444 NEIPESISLLTNLVTLDISRNFLHSLPSEMIHLSLELTNLNLSVNKITRIPLSI 497



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 181/410 (44%), Gaps = 45/410 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +E N ++++  NL      L  L    N +  +  + G+L+ L  LD+  N+++ 
Sbjct: 33  LQDLHMEYNNISIIPPNL-GRLYQLKCLHLQHNEIQDIKNSTGTLTNLTDLDMSHNKLIK 91

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           I     G  +L    + NN +  LPAE+G L +                      L+ L 
Sbjct: 92  IGPDFRGNKNLTRLNISNNRILRLPAEIGMLER---------------------NLTSLS 130

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPENED 177
           LSNN +  LP  I K++ L KL +T N +  L  ++ +  + + L+   ++    P+   
Sbjct: 131 LSNNRIQSLPSNISKLSNLTKLCITANHVEKLPDAIAHLTSLSHLEADNNKVVTFPKKLG 190

Query: 178 SEASTTKEDL-----------ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
           + A      L           I   T+L +    L +    L  +P E+++   +  L L
Sbjct: 191 NLAGMKVLSLNHNFLDSLPADIYHLTKLQI----LDMCNFMLDTVPKEVFQKLNLENLYL 246

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S N +  +   +     L+ + L  N++KD P A   +L  L  L LD+N    +P   F
Sbjct: 247 SGNILNNIDKNIGMLVHLKQIFLVHNRLKDLP-ASFGTLVDLQLLMLDHNRFSIIPQCIF 305

Query: 287 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
           K   +L+ L +S+N      +P   SL  L+ L+L    L   P DI +   L+ + L  
Sbjct: 306 KLKNLLK-LTISFNDLKGELSPEVGSLQLLEILWLNNNSLDVLPDDIGKCHNLKEMCLKH 364

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNIS--ALPPELGLLEPSLQALRLDGN 394
           N L  +PE    L+ L  LD+S N +S   LP +LG L  ++Q L L+GN
Sbjct: 365 NRLYHLPETMMFLSGLRLLDVSYNALSTLCLPQQLGALT-AVQELMLEGN 413



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 177/391 (45%), Gaps = 55/391 (14%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L  L  S N+LN + + IG L  L ++ L  NR+  +P+S      L    + +N  S +
Sbjct: 241 LENLYLSGNILNNIDKNIGMLVHLKQIFLVHNRLKDLPASFGTLVDLQLLMLDHNRFSII 300

Query: 85  PAELGKLSKLGTLDLHSNQLK-EYCVEACQLRL-SVLDLSNNSLSGLPPEIGKMTTLRKL 142
           P  + KL  L  L +  N LK E   E   L+L  +L L+NNSL  LP +IGK   L+++
Sbjct: 301 PQCIFKLKNLLKLTISFNDLKGELSPEVGSLQLLEILWLNNNSLDVLPDDIGKCHNLKEM 360

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTS--K 199
            L  N L  L         P  + +L   RL +   +  ST     + +  +L   +  +
Sbjct: 361 CLKHNRLYHL---------PETMMFLSGLRLLDVSYNALST-----LCLPQQLGALTAVQ 406

Query: 200 ELSLEGMNLSA-----IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
           EL LEG  + A     IP+ I++   +  L L+ N + E+P  +S   +L TL +SRN +
Sbjct: 407 ELMLEGNMIDATEIDSIPTPIFQMSHLVSLFLADNQLNEIPESISLLTNLVTLDISRNFL 466

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 314
              P  ++     L+ L L  N + ++P    +++  LQ LDLS N  +L      S   
Sbjct: 467 HSLPSEMIHLSLELTNLNLSVNKITRIPL-SIQNLTNLQSLDLSKNDLTLIP-AEISRCT 524

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQN--------------------------- 347
            L  +   + Q+R  P  I  L+ LR L+L +N                           
Sbjct: 525 ALTSIEFEQNQIRFLPKAIGALKNLRTLNLKKNSLTSLPLSLSDIPNLSNLEIDHVLNIN 584

Query: 348 --SLQSIPEGFKNLTSLTELDLSDNNISALP 376
             +L+S+P+   +L +L  L++S+N I  +P
Sbjct: 585 NLALRSVPQEVGDLVTLKILNISNNQIVEIP 615



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 175/382 (45%), Gaps = 62/382 (16%)

Query: 39  PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 98
           P +I  L  L  LD+ +NRI  +   +    SL + +M  N +S +P  LG+L +L  L 
Sbjct: 1   PPSILPLGSLTFLDMSENRIRDVHEGVHLLSSLQDLHMEYNNISIIPPNLGRLYQLKCLH 60

Query: 99  LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
           L  N++++       L  L+ LD+S+N L  + P+      L +L ++ N  R LR    
Sbjct: 61  LQHNEIQDIKNSTGTLTNLTDLDMSHNKLIKIGPDFRGNKNLTRLNISNN--RILR---- 114

Query: 158 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 217
               PA +  L   L                            LSL    + ++PS I +
Sbjct: 115 ---LPAEIGMLERNL--------------------------TSLSLSNNRIQSLPSNISK 145

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              +TKL ++ N +++LP  ++   SL  L    NK+  +P   L +L+ +  L L++N 
Sbjct: 146 LSNLTKLCITANHVEKLPDAIAHLTSLSHLEADNNKVVTFPKK-LGNLAGMKVLSLNHNF 204

Query: 278 LRQVPSDGFKDIPMLQILDL-SYNIASLP---------ENPPFSS------------LPH 315
           L  +P+D +  +  LQILD+ ++ + ++P         EN   S             L H
Sbjct: 205 LDSLPADIYH-LTKLQILDMCNFMLDTVPKEVFQKLNLENLYLSGNILNNIDKNIGMLVH 263

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA- 374
           L++++L   +L++ P     L  L++L L  N    IP+    L +L +L +S N++   
Sbjct: 264 LKQIFLVHNRLKDLPASFGTLVDLQLLMLDHNRFSIIPQCIFKLKNLLKLTISFNDLKGE 323

Query: 375 LPPELGLLEPSLQALRLDGNPL 396
           L PE+G L+  L+ L L+ N L
Sbjct: 324 LSPEVGSLQ-LLEILWLNNNSL 344



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 176/406 (43%), Gaps = 72/406 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L + GN L  +  N I     L ++    N L  +P + G+L  L  L L  NR   
Sbjct: 241 LENLYLSGNILNNIDKN-IGMLVHLKQIFLVHNRLKDLPASFGTLVDLQLLMLDHNRFSI 299

Query: 61  IPSSI-----------------------SGCCSLAEF-YMGNNALSALPAELGKLSKLGT 96
           IP  I                        G   L E  ++ NN+L  LP ++GK   L  
Sbjct: 300 IPQCIFKLKNLLKLTISFNDLKGELSPEVGSLQLLEILWLNNNSLDVLPDDIGKCHNLKE 359

Query: 97  LDLHSNQLKEYCVEACQLRLS---VLDLSNNSLSGL--PPEIGKMTTLRKLLLTGNPLRT 151
           + L  N+L  Y +    + LS   +LD+S N+LS L  P ++G +T +++L+L GN +  
Sbjct: 360 MCLKHNRL--YHLPETMMFLSGLRLLDVSYNALSTLCLPQQLGALTAVQELMLEGNMIDA 417

Query: 152 LRSSLVNGPTPAL-LKYLRSRLPE----NEDSEASTTKEDLITM-------------ATR 193
             + + + PTP   + +L S        NE  E+ +   +L+T+                
Sbjct: 418 --TEIDSIPTPIFQMSHLVSLFLADNQLNEIPESISLLTNLVTLDISRNFLHSLPSEMIH 475

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           LS+    L+L    ++ IP  I     +  LDLS+N +  +P E+S C +L ++   +N+
Sbjct: 476 LSLELTNLNLSVNKITRIPLSIQNLTNLQSLDLSKNDLTLIPAEISRCTALTSIEFEQNQ 535

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 313
           I+  P AI  +L +L  L L  N L  +P     DIP L  L++ +              
Sbjct: 536 IRFLPKAI-GALKNLRTLNLKKNSLTSLPLSL-SDIPNLSNLEIDH-------------- 579

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                L +  + LR  P ++  L  L+IL++S N +  IP  F  L
Sbjct: 580 ----VLNINNLALRSVPQEVGDLVTLKILNISNNQIVEIPVFFAQL 621



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 4/140 (2%)

Query: 265 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRR 323
           L SL+ L +  N +R V  +G   +  LQ L + YN I+ +P  P    L  L+ L+L+ 
Sbjct: 7   LGSLTFLDMSENRIRDV-HEGVHLLSSLQDLHMEYNNISIIP--PNLGRLYQLKCLHLQH 63

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            ++++       L  L  LD+S N L  I   F+   +LT L++S+N I  LP E+G+LE
Sbjct: 64  NEIQDIKNSTGTLTNLTDLDMSHNKLIKIGPDFRGNKNLTRLNISNNRILRLPAEIGMLE 123

Query: 384 PSLQALRLDGNPLRSIRRTI 403
            +L +L L  N ++S+   I
Sbjct: 124 RNLTSLSLSNNRIQSLPSNI 143


>gi|418678790|ref|ZP_13240064.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321980|gb|EJO69840.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 379

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 166/349 (47%), Gaps = 41/349 (11%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L+L  +++ ++   I    +L + Y+  N L+ LP E+G+L  L  LDL+SN+L     E
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L+ L VL+L  N L+ LP E+G++  L+ L L  N L  L         P  +  L+
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL---------PEKIGQLQ 163

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           +    N D    T   + I     L V    L+L+   L+ +P +I +   +  L+   N
Sbjct: 164 NLQVLNLDLNKLTILPEKIGQLQNLQV----LNLDLNKLTILPEKIGQLQNLQILNSQGN 219

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +   P E+   + LQ L L  N++   P+ I   L  L  L L NNPLR +P    K+I
Sbjct: 220 QLTTFPKEIGQLSKLQKLYLYGNQLTTLPEEI-GQLKKLQELYLGNNPLRTLP----KEI 274

Query: 290 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
             LQ                      LQ LYL   Q+   P +I +LQ L+ L+L  N L
Sbjct: 275 EQLQ---------------------KLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQL 313

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
            ++P+    L +L EL+L  N ++ LP E+G L+  L+ L L  NP+ S
Sbjct: 314 TTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQ-KLRKLNLYNNPIAS 361



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 160/350 (45%), Gaps = 43/350 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++ G+KL  LS   I     L +L  + N L  +P  IG L  L  LDL+ N +  +P 
Sbjct: 53  LNLSGSKLATLSKE-IGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPK 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    +G N L+ LP E+G+L  L  L+L  N+L     +  QL+ L VL+L 
Sbjct: 112 EIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLD 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP +IG++  L+ L L  N L                    + LPE        
Sbjct: 172 LNKLTILPEKIGQLQNLQVLNLDLNKL--------------------TILPEK------- 204

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                I     L +    L+ +G  L+  P EI +  ++ KL L  N +  LP E+    
Sbjct: 205 -----IGQLQNLQI----LNSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLK 255

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
            LQ L L  N ++  P  I   L  L  L L+ N +   P +    +  LQ L+L +N +
Sbjct: 256 KLQELYLGNNPLRTLPKEI-EQLQKLQTLYLEGNQITTFPKE-IGQLQNLQELNLGFNQL 313

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
            +LP+      L +LQEL L   QL   P ++ +LQ+LR L+L  N + S
Sbjct: 314 TTLPQ--EIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIAS 361



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 151/326 (46%), Gaps = 43/326 (13%)

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
            L+ L  E+GKL  L  L L+ NQL     E  QL+ L VLDL +N L+ LP EIGK+  
Sbjct: 59  KLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQN 118

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L+ L L  N L  L                                 D +     L V  
Sbjct: 119 LQVLNLGFNRLTIL--------------------------------PDEVGQLQNLQV-- 144

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
             L+L+   L+ +P +I +   +  L+L  N +  LP ++    +LQ L L  NK+   P
Sbjct: 145 --LNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILP 202

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
           + I   L +L  L    N L   P +    +  LQ L L  N + +LPE      L  LQ
Sbjct: 203 EKI-GQLQNLQILNSQGNQLTTFPKE-IGQLSKLQKLYLYGNQLTTLPE--EIGQLKKLQ 258

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           ELYL    LR  P +I +LQ+L+ L L  N + + P+    L +L EL+L  N ++ LP 
Sbjct: 259 ELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQ 318

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
           E+G L+ +LQ L L+ N L ++ + +
Sbjct: 319 EIGQLQ-NLQELNLEFNQLATLPKEV 343



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 23/168 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL + GN+LT L    I     L EL    N L  +P+ I  L +L  L L  N+I +
Sbjct: 234 LQKLYLYGNQLTTLPEE-IGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITT 292

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
            P  I    +L E  +G N L+ LP E+G+L  L  L+L  NQ                 
Sbjct: 293 FPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQ----------------- 335

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
                L+ LP E+G++  LRKL L  NP+ + +   +    P  + Y 
Sbjct: 336 -----LATLPKEVGQLQKLRKLNLYNNPIASEKIERIRKLLPKCIIYF 378


>gi|440298092|gb|ELP90733.1| PH domain leucine-rich repeat-containing protein phosphatase,
           putative [Entamoeba invadens IP1]
          Length = 824

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 197/415 (47%), Gaps = 49/415 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  NK+T  + + I  +  L ++ AS+NLL  +     S + L  +DL QN+I  
Sbjct: 53  LENLTIASNKITHFTEDNIRQFPKLKKVDASQNLLKEIG-AFKSFTSLTHIDLTQNQISD 111

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           + + ++   +L    +  N L  +P E  +LS L TL+L +N+   + +E C   L  L 
Sbjct: 112 V-TPLTNSFNLVFLSLSLNKLQCIPREFSRLSNLQTLELDNNEFTHFPIEVCACPLQTLS 170

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           L+ NS+  +P ++ +++ ++ L  T N + TL S L N  +   L +  + L        
Sbjct: 171 LNGNSIREIPQDVQQLSCIQMLSFTFNHITTLPSFLSNMTSLISLDFDHNPL-------- 222

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ---ELPPE 237
             T  DLI      S + ++L L  + L  +   + E   +T+L +   +++   ELPP 
Sbjct: 223 --TSLDLIN-----SPSIRDLILSDLKLDIL--SLHEFVSLTRLRVFAGAVKQVYELPP- 272

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSL------------SSLSCLKLDNNPLRQVPSDG 285
              C  ++ L +    IK  P   + SL            S +  L L NN L ++P D 
Sbjct: 273 -IKCLVMENLGIE--CIKSIPQCTMLSLENNALTSIPSLNSEICSLNLKNNMLTKLP-DV 328

Query: 286 FKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
           F   P L++L+++ N I+ LP     +   +LQ L+L   +  E P  ILRL+ L+ LDL
Sbjct: 329 F---PNLEVLNVTQNFISELP-----TLYTNLQSLFLGCNEFTEFPRPILRLEGLKHLDL 380

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           S N L  IP     LT L +L  S N +   P EL +L  +L+ L L  N L  I
Sbjct: 381 SHNKLTEIPSAISKLTELQQLKFSFNYLCYTPSELSVL-GNLRLLNLSHNRLYQI 434



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 13/164 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  NKLT + +  I+  T L +L  S N L   P  +  L  L  L+L  NR+  
Sbjct: 375 LKHLDLSHNKLTEIPS-AISKLTELQQLKFSFNYLCYTPSELSVLGNLRLLNLSHNRLYQ 433

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IP  +S    L    + +N + ALP  L  +S L  LD+  NQL   C++ C   +  L+
Sbjct: 434 IPHRLS--IKLRTLLVSSNRIIALPTTLSLMS-LVELDVSCNQL--ICID-CLSSIKTLE 487

Query: 121 ---LSNNSLSGLPPEIGKMTTLRKLLLTGNPLR---TLRSSLVN 158
               S N ++ +P  +     L++  + G   +   ++R +++N
Sbjct: 488 DVNCSYNDINNIPKNVFSFVNLKRFTIVGKRFKIEQSMRKAVMN 531



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 112/286 (39%), Gaps = 85/286 (29%)

Query: 40  ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 99
           E I S+ +   L L  N + SIPS  S  CSL    + NN L+ LP            D+
Sbjct: 284 ECIKSIPQCTMLSLENNALTSIPSLNSEICSLN---LKNNMLTKLP------------DV 328

Query: 100 HSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 159
             N             L VL+++ N +S LP      T L+ L L  N            
Sbjct: 329 FPN-------------LEVLNVTQNFISELPT---LYTNLQSLFLGCNEFTEF------- 365

Query: 160 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 219
           P P L      RL            E L           K L L    L+ IPS I +  
Sbjct: 366 PRPIL------RL------------EGL-----------KHLDLSHNKLTEIPSAISKLT 396

Query: 220 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD-----------------AIL 262
           E+ +L  S N +   P ELS   +L+ L LS N++   P                  A+ 
Sbjct: 397 ELQQLKFSFNYLCYTPSELSVLGNLRLLNLSHNRLYQIPHRLSIKLRTLLVSSNRIIALP 456

Query: 263 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN 307
           T+LS +S ++LD +  + +  D    I  L+ ++ SYN I ++P+N
Sbjct: 457 TTLSLMSLVELDVSCNQLICIDCLSSIKTLEDVNCSYNDINNIPKN 502


>gi|359319033|ref|XP_003638977.1| PREDICTED: protein LAP2-like isoform 2 [Canis lupus familiaris]
          Length = 1302

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLVSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDVSKNNIEMIEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N I
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEI 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NIRTFAADHNYLQQL 337


>gi|124002029|ref|ZP_01686883.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992495|gb|EAY31840.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 395

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 176/369 (47%), Gaps = 53/369 (14%)

Query: 40  ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 99
           +T+ SL  L + +L++     I  ++    +     + N  L  +P E+GKL KL  LDL
Sbjct: 25  DTLLSLQELEQKELYK----VIDDAVHDAANAYLLSLKNKGLKKVPKEIGKLKKLQMLDL 80

Query: 100 HSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
             NQ+     C+ + +  L +LDL  + ++ LP  IG +  L+ L +  N L        
Sbjct: 81  GLNQIDTLPPCIGSLKF-LQILDLWGDKIAYLPDTIGNLVHLKFLYMDYNKL-------- 131

Query: 158 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 217
                        +LP++            I   T+L V    + LEG  L+ IPSEI  
Sbjct: 132 ------------VKLPKS------------IKKLTQLQV----IDLEGNKLTRIPSEIGA 163

Query: 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
              +  LDL +N I  +P +L + + L+ L L  N+IK  P AI   L SL  L L NN 
Sbjct: 164 LKSLRVLDLEKNGISTIPSQLGNLSQLEVLDLDSNQIKQIPYAI-GGLRSLKYLYLRNNL 222

Query: 278 LRQVPSDGFKDIPMLQILDLSYNI--ASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
           +  +P D  K++  L+ L +S N   +S  ++     L  L+ L L + +L   P DI++
Sbjct: 223 IDSLP-DELKNMVKLEHLYVSNNRLDSSFAKSRFLGKLQSLKTLDLSKNKLVRLPQDIVQ 281

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L+ L+ L L  N LQ++P+    + +L ELDL +N ++ LP  +      LQ  +L    
Sbjct: 282 LKNLKTLILHNNQLQALPDSLGEIENLEELDLRNNQLTVLPKSV------LQLAKLKKLI 335

Query: 396 LRSIRRTIL 404
           LR+ + T+L
Sbjct: 336 LRNNQLTVL 344



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 144/318 (45%), Gaps = 41/318 (12%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N ++ +P  IGSL  L  LDL  ++I  +P +I     L   YM  N L  LP  + KL+
Sbjct: 83  NQIDTLPPCIGSLKFLQILDLWGDKIAYLPDTIGNLVHLKFLYMDYNKLVKLPKSIKKLT 142

Query: 93  KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
           +L  +DL  N+L     E   L+ L VLDL  N +S +P ++G ++ L  L L  N ++ 
Sbjct: 143 QLQVIDLEGNKLTRIPSEIGALKSLRVLDLEKNGISTIPSQLGNLSQLEVLDLDSNQIKQ 202

Query: 152 LRSSLVNGPTPALLKYLRSRLPEN--EDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
           +  + + G       YLR+ L ++  ++ +     E L     RL  +  +    G    
Sbjct: 203 IPYA-IGGLRSLKYLYLRNNLIDSLPDELKNMVKLEHLYVSNNRLDSSFAKSRFLG---- 257

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
                  +   +  LDLS+N +  LP ++    +L+TLIL  N+++  PD+ L  + +L 
Sbjct: 258 -------KLQSLKTLDLSKNKLVRLPQDIVQLKNLKTLILHNNQLQALPDS-LGEIENLE 309

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 329
            L L NN L  +P    +                         L  L++L LR  QL   
Sbjct: 310 ELDLRNNQLTVLPKSVLQ-------------------------LAKLKKLILRNNQLTVL 344

Query: 330 PTDILRLQQLRILDLSQN 347
           P +I +++ L+ LDL  N
Sbjct: 345 PEEIAQMKNLKELDLRGN 362



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 124/268 (46%), Gaps = 30/268 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ G+K+  L +  I +   L  L    N L  +P++I  L++L  +DL  N++  IPS
Sbjct: 101 LDLWGDKIAYLPDT-IGNLVHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEGNKLTRIPS 159

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    SL    +  N +S +P++LG LS+L  LDL SNQ+K+       LR L  L L 
Sbjct: 160 EIGALKSLRVLDLEKNGISTIPSQLGNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLR 219

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS---------RLP 173
           NN +  LP E+  M  L  L ++ N    L SS         L+ L++         RLP
Sbjct: 220 NNLIDSLPDELKNMVKLEHLYVSNN---RLDSSFAKSRFLGKLQSLKTLDLSKNKLVRLP 276

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                      +D++ +        K L L    L A+P  + E   + +LDL  N +  
Sbjct: 277 -----------QDIVQLKNL-----KTLILHNNQLQALPDSLGEIENLEELDLRNNQLTV 320

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAI 261
           LP  +   A L+ LIL  N++   P+ I
Sbjct: 321 LPKSVLQLAKLKKLILRNNQLTVLPEEI 348



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 158/371 (42%), Gaps = 46/371 (12%)

Query: 29  IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 88
           +  K L   + + +   +    L L    +  +P  I     L    +G N +  LP  +
Sbjct: 33  LEQKELYKVIDDAVHDAANAYLLSLKNKGLKKVPKEIGKLKKLQMLDLGLNQIDTLPPCI 92

Query: 89  GKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 146
           G L  L  LDL  +++  Y  +     + L  L +  N L  LP  I K+T L+ + L G
Sbjct: 93  GSLKFLQILDLWGDKI-AYLPDTIGNLVHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEG 151

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
           N L                    +R+P    SE    K            + + L LE  
Sbjct: 152 NKL--------------------TRIP----SEIGALK------------SLRVLDLEKN 175

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            +S IPS++    ++  LDL  N I+++P  +    SL+ L L  N I   PD  L ++ 
Sbjct: 176 GISTIPSQLGNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRNNLIDSLPDE-LKNMV 234

Query: 267 SLSCLKLDNNPLRQ--VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRR 323
            L  L + NN L      S     +  L+ LDLS N +  LP++     L +L+ L L  
Sbjct: 235 KLEHLYVSNNRLDSSFAKSRFLGKLQSLKTLDLSKNKLVRLPQD--IVQLKNLKTLILHN 292

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            QL+  P  +  ++ L  LDL  N L  +P+    L  L +L L +N ++ LP E+  ++
Sbjct: 293 NQLQALPDSLGEIENLEELDLRNNQLTVLPKSVLQLAKLKKLILRNNQLTVLPEEIAQMK 352

Query: 384 PSLQALRLDGN 394
            +L+ L L GN
Sbjct: 353 -NLKELDLRGN 362



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 94/229 (41%), Gaps = 53/229 (23%)

Query: 187 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
           +I  A   +  +  LSL+   L  +P EI +  ++  LDL  N I  LPP + S   LQ 
Sbjct: 41  VIDDAVHDAANAYLLSLKNKGLKKVPKEIGKLKKLQMLDLGLNQIDTLPPCIGSLKFLQI 100

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE 306
           L L       W D                                         IA LP+
Sbjct: 101 LDL-------WGDK----------------------------------------IAYLPD 113

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                +L HL+ LY+   +L + P  I +L QL+++DL  N L  IP     L SL  LD
Sbjct: 114 T--IGNLVHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEGNKLTRIPSEIGALKSLRVLD 171

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           L  N IS +P +LG L   L+ L LD N ++ I   I   G    LKYL
Sbjct: 172 LEKNGISTIPSQLGNLS-QLEVLDLDSNQIKQIPYAI---GGLRSLKYL 216


>gi|359728059|ref|ZP_09266755.1| hypothetical protein Lwei2_14517 [Leptospira weilii str.
           2006001855]
          Length = 576

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 177/381 (46%), Gaps = 46/381 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  N+LTVL    I     L  L    N L  +P+ IG L  L  LDL  N +  
Sbjct: 212 LERLNLIENRLTVLPKE-IGQLQNLQTLNLGYNKLANIPKEIGELRSLKELDLSDNELKV 270

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  +    +L    + +N +  LP E+  L  L +LDL  NQ K    E  +L+ L  L
Sbjct: 271 LPKELGTIANLQSLKLNDNRIVNLPKEIELLQNLRSLDLSGNQFKVLPKEIGRLQNLQSL 330

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DLS+N  + LP E+G++  L+KL +  NPL            P     +++ LP  E   
Sbjct: 331 DLSDNQFTTLPSEVGELRNLKKLNIDSNPL-----------LPGEKDKIQNLLPNCEIDS 379

Query: 180 ASTTKEDLI----TMATRLSVTSKELSLEGMNLSAI---PSEIWEAGEITKLDLSRNSIQ 232
           +   K+D I     +A+   +    LSLE     +    P +I E   +  L L    ++
Sbjct: 380 SYAGKDDQIYYDLNIASENPLKVLNLSLEYKEYESFYNFPKKILEFRNLRGLGLYDVGLE 439

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            +P E+    +L+TL L  N++K  P  I   L +L  L L+ N L+ +P    K+I  L
Sbjct: 440 IIPKEIRRLQNLETLRLGLNRLKTLPKEI-GQLKNLRGLSLEANELKTLP----KEIEQL 494

Query: 293 QILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
           Q                     +L+ L L + + +  P +I +L++L+ LDLS N L ++
Sbjct: 495 Q---------------------NLRGLNLHQNRFKIFPKEIGQLRKLQKLDLSVNQLTTL 533

Query: 353 PEGFKNLTSLTELDLSDNNIS 373
           P     L +L EL+LSDN +S
Sbjct: 534 PAEIGQLQNLQELNLSDNPLS 554



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 158/318 (49%), Gaps = 20/318 (6%)

Query: 81  LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL 139
           L+ LP E+G L  L  L+L  N+L     E  +L +L  LDL  N L  LPPEIG++  L
Sbjct: 61  LTVLPWEVGNLGNLQELNLAFNELSTIPEEIKRLQKLQSLDLYGNRLEALPPEIGQLQNL 120

Query: 140 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 199
             L L+ N L TL         PA +K L++    N   +  T     I   + L +   
Sbjct: 121 SWLSLSKNQLATL---------PAEIKLLQNLQYLNLSKDRLTILPKGIGELSNLKI--- 168

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
            L++    +S  P EI +   +  LDLS N IQ +  ++    +L+ L L  N++   P 
Sbjct: 169 -LNVSYNKVSVFPEEIGKLQNLKDLDLSNNRIQVVSEKVGKLRNLERLNLIENRLTVLPK 227

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 318
            I   L +L  L L  N L  +P +   ++  L+ LDLS N +  LP+     ++ +LQ 
Sbjct: 228 EI-GQLQNLQTLNLGYNKLANIPKE-IGELRSLKELDLSDNELKVLPK--ELGTIANLQS 283

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L L   ++   P +I  LQ LR LDLS N  + +P+    L +L  LDLSDN  + LP E
Sbjct: 284 LKLNDNRIVNLPKEIELLQNLRSLDLSGNQFKVLPKEIGRLQNLQSLDLSDNQFTTLPSE 343

Query: 379 LGLLEPSLQALRLDGNPL 396
           +G L  +L+ L +D NPL
Sbjct: 344 VGELR-NLKKLNIDSNPL 360



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 132/432 (30%), Positives = 195/432 (45%), Gaps = 73/432 (16%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           ++LT+L    I   + L  L  S N ++  PE IG L  L  LDL  NRI  +   +   
Sbjct: 151 DRLTILPKG-IGELSNLKILNVSYNKVSVFPEEIGKLQNLKDLDLSNNRIQVVSEKVGKL 209

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 127
            +L    +  N L+ LP E+G+L  L TL+L  N+L     E  +LR L  LDLS+N L 
Sbjct: 210 RNLERLNLIENRLTVLPKEIGQLQNLQTLNLGYNKLANIPKEIGELRSLKELDLSDNELK 269

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP-ALLKYLRSRLPENEDSEASTTKED 186
            LP E+G +  L+ L L  N        +VN P    LL+ LRS                
Sbjct: 270 VLPKELGTIANLQSLKLNDN-------RIVNLPKEIELLQNLRS---------------- 306

Query: 187 LITMATRLSVTSKEL----SLEGMNLS-----AIPSEIWEAGEITKLDLSRN-------- 229
           L     +  V  KE+    +L+ ++LS      +PSE+ E   + KL++  N        
Sbjct: 307 LDLSGNQFKVLPKEIGRLQNLQSLDLSDNQFTTLPSEVGELRNLKKLNIDSNPLLPGEKD 366

Query: 230 SIQELPP-------------------ELSSCASLQTLILS-----RNKIKDWPDAILTSL 265
            IQ L P                    ++S   L+ L LS          ++P  IL   
Sbjct: 367 KIQNLLPNCEIDSSYAGKDDQIYYDLNIASENPLKVLNLSLEYKEYESFYNFPKKIL-EF 425

Query: 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 324
            +L  L L +  L  +P +  + +  L+ L L  N + +LP+      L +L+ L L   
Sbjct: 426 RNLRGLGLYDVGLEIIPKE-IRRLQNLETLRLGLNRLKTLPK--EIGQLKNLRGLSLEAN 482

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
           +L+  P +I +LQ LR L+L QN  +  P+    L  L +LDLS N ++ LP E+G L+ 
Sbjct: 483 ELKTLPKEIEQLQNLRGLNLHQNRFKIFPKEIGQLRKLQKLDLSVNQLTTLPAEIGQLQ- 541

Query: 385 SLQALRLDGNPL 396
           +LQ L L  NPL
Sbjct: 542 NLQELNLSDNPL 553



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 132/418 (31%), Positives = 197/418 (47%), Gaps = 38/418 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+ GN+L  L    I     L+ L  SKN L  +P  I  L  L  L+L ++R+  
Sbjct: 97  LQSLDLYGNRLEALPPE-IGQLQNLSWLSLSKNQLATLPAEIKLLQNLQYLNLSKDRLTI 155

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    +  N +S  P E+GKL  L  LDL +N+++    +  +LR L  L
Sbjct: 156 LPKGIGELSNLKILNVSYNKVSVFPEEIGKLQNLKDLDLSNNRIQVVSEKVGKLRNLERL 215

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE--D 177
           +L  N L+ LP EIG++  L+ L L  N L  +         P  +  LRS L E +  D
Sbjct: 216 NLIENRLTVLPKEIGQLQNLQTLNLGYNKLANI---------PKEIGELRS-LKELDLSD 265

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
           +E     ++L T+A   S     L L    +  +P EI     +  LDLS N  + LP E
Sbjct: 266 NELKVLPKELGTIANLQS-----LKLNDNRIVNLPKEIELLQNLRSLDLSGNQFKVLPKE 320

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD-IPMLQILD 296
           +    +LQ+L LS N+    P  +   L +L  L +D+NPL     D  ++ +P  +I D
Sbjct: 321 IGRLQNLQSLDLSDNQFTTLPSEV-GELRNLKKLNIDSNPLLPGEKDKIQNLLPNCEI-D 378

Query: 297 LSY-----------NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
            SY           NIAS  ENP    + +L   Y         P  IL  + LR L L 
Sbjct: 379 SSYAGKDDQIYYDLNIAS--ENP--LKVLNLSLEYKEYESFYNFPKKILEFRNLRGLGLY 434

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L+ IP+  + L +L  L L  N +  LP E+G L+ +L+ L L+ N L+++ + I
Sbjct: 435 DVGLEIIPKEIRRLQNLETLRLGLNRLKTLPKEIGQLK-NLRGLSLEANELKTLPKEI 491



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 114/228 (50%), Gaps = 27/228 (11%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           +EL+L    LS IP EI    ++  LDL  N ++ LPPE+    +L  L LS+N++   P
Sbjct: 75  QELNLAFNELSTIPEEIKRLQKLQSLDLYGNRLEALPPEIGQLQNLSWLSLSKNQLATLP 134

Query: 259 DAI----------------------LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
             I                      +  LS+L  L +  N +   P +  K +  L+ LD
Sbjct: 135 AEIKLLQNLQYLNLSKDRLTILPKGIGELSNLKILNVSYNKVSVFPEEIGK-LQNLKDLD 193

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           LS N I  + E      L +L+ L L   +L   P +I +LQ L+ L+L  N L +IP+ 
Sbjct: 194 LSNNRIQVVSE--KVGKLRNLERLNLIENRLTVLPKEIGQLQNLQTLNLGYNKLANIPKE 251

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L SL ELDLSDN +  LP ELG +  +LQ+L+L+ N + ++ + I
Sbjct: 252 IGELRSLKELDLSDNELKVLPKELGTI-ANLQSLKLNDNRIVNLPKEI 298



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           Q L L   +L   P ++  L  L+ L+L+ N L +IPE  K L  L  LDL  N + ALP
Sbjct: 52  QILVLSSQELTVLPWEVGNLGNLQELNLAFNELSTIPEEIKRLQKLQSLDLYGNRLEALP 111

Query: 377 PELGLLEPSLQALRLDGNPLRSI 399
           PE+G L+ +L  L L  N L ++
Sbjct: 112 PEIGQLQ-NLSWLSLSKNQLATL 133


>gi|418730417|ref|ZP_13288911.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774626|gb|EKR54630.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 428

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 174/367 (47%), Gaps = 41/367 (11%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ I  L  L +L L  NR+ ++P  I    +L E  + +N L+ LP E+GKL  L  L
Sbjct: 63  LPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRL 122

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL+ N+L    +E  +L+ L  L LS+N L+ LP E GK+  L++L L+ N L TL    
Sbjct: 123 DLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTL---- 178

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                P  +  L++    N  S   TT    I     L      L+L    L+ +P EI 
Sbjct: 179 -----PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQT----LNLSDNQLTTLPIEIG 229

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           +   +  L+LS N +  L  E+    +L TL LS N++   P  I   L +L  L L  N
Sbjct: 230 KLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEI-GKLQNLHTLNLSGN 288

Query: 277 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
                           Q+  LS  I           L +LQ+L L   QL     +I +L
Sbjct: 289 ----------------QLTTLSIEIG---------KLQNLQDLNLHSNQLTTLSKEIEQL 323

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           + L+ L LS N L  +P+    L +L EL+L +N ++ALP E+G L+ +LQ L L  N L
Sbjct: 324 KNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQ-NLQTLSLYKNRL 382

Query: 397 RSIRRTI 403
            +  + I
Sbjct: 383 MTFPKEI 389



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 158/347 (45%), Gaps = 45/347 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+L  L    I     L EL  S N L  +P+ IG L  L RLDL+ NR+  
Sbjct: 73  LQKLYLFDNRLKTLPKE-IGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 61  IPSSISGCCSLAEFY-----------------------MGNNALSALPAELGKLSKLGTL 97
           +P  I    +L   Y                       + +N L+ LP E+G+L  L TL
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTL 191

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           +L SNQL     E  QL+ L  L+LS+N L+ LP EIGK+  L  L L+GN L TL   +
Sbjct: 192 NLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI 251

Query: 157 VNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 215
                   L+ L +  L +N+ +        L  + T        L+L G  L+ +  EI
Sbjct: 252 ------GKLQNLHTLNLSDNQLTTLPIEIGKLQNLHT--------LNLSGNQLTTLSIEI 297

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
            +   +  L+L  N +  L  E+    +LQTL LS N++   P  I   L +L  L L N
Sbjct: 298 GKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEI-GQLQNLQELNLWN 356

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 321
           N L  +P +    +  LQ L L  N + + P+      L +LQ LYL
Sbjct: 357 NQLTALPIE-IGQLQNLQTLSLYKNRLMTFPK--EIGQLKNLQTLYL 400



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 136/287 (47%), Gaps = 42/287 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS  + + LP EI ++  L+KL L  N L+TL         P  +  L++   
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTL---------PKEIGQLKNL-- 96

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                    +EL+L    L+ +P EI +   + +LDL  N +  
Sbjct: 97  -------------------------QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQTL LS N++   P      L +L  L L +N L  +P +    +  LQ
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRES-GKLENLQELNLSDNQLTTLPQE-IGQLQNLQ 189

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L+L  N + +L +      L +LQ L L   QL   P +I +LQ L  L+LS N L ++
Sbjct: 190 TLNLKSNQLTTLFK--EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTL 247

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
                 L +L  L+LSDN ++ LP E+G L+ +L  L L GN L ++
Sbjct: 248 SIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQ-NLHTLNLSGNQLTTL 293



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 114/213 (53%), Gaps = 6/213 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L G N + +P EI +   + KL L  N ++ LP E+    +LQ L
Sbjct: 40  LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            LS N++   P  I   L +L  L L +N L  +P +  K +  LQ L LS N + +LP 
Sbjct: 100 NLSSNQLTILPKEI-GKLENLQRLDLYDNRLTILPIEIGK-LQNLQTLYLSSNQLTTLPR 157

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +LQEL L   QL   P +I +LQ L+ L+L  N L ++ +  + L +L  L+
Sbjct: 158 ES--GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLN 215

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LSDN ++ LP E+G L+ +L  L L GN L ++
Sbjct: 216 LSDNQLTTLPIEIGKLQ-NLHTLNLSGNQLTTL 247



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 85/180 (47%), Gaps = 27/180 (15%)

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           LDLS  +   LP E+    +LQ L L  N++K  P  I   L +L  L L +N L  +P 
Sbjct: 53  LDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEI-GQLKNLQELNLSSNQLTILPK 111

Query: 284 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
           +                            L +LQ L L   +L   P +I +LQ L+ L 
Sbjct: 112 E-------------------------IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLY 146

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           LS N L ++P     L +L EL+LSDN ++ LP E+G L+ +LQ L L  N L ++ + I
Sbjct: 147 LSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQ-NLQTLNLKSNQLTTLFKEI 205



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 4/111 (3%)

Query: 292 LQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
           +++LDLS  N  +LP+      L +LQ+LYL   +L+  P +I +L+ L+ L+LS N L 
Sbjct: 50  VRVLDLSGQNFTTLPK--EIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLT 107

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
            +P+    L +L  LDL DN ++ LP E+G L+ +LQ L L  N L ++ R
Sbjct: 108 ILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQ-NLQTLYLSSNQLTTLPR 157


>gi|421109036|ref|ZP_15569563.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410005803|gb|EKO59587.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 353

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 150/300 (50%), Gaps = 28/300 (9%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV---NGPTPALLKYLRSRL 172
           + VLDLS  +L+  P EIG+   L++L L+GN L  L   +V   N    +L     + L
Sbjct: 43  VRVLDLSFQNLTTFPKEIGQFKNLQRLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKEL----SLEGMNLS-----AIPSEIWEAGEITK 223
           P+  +   S    DL     +L+   KE+    +LE +NLS     A+P EI +   +  
Sbjct: 103 PKEIEQLKSLKNLDL--FRNQLTTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQI 160

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           L L  N I  LP E+     L+ LIL  N+ K+ P   L  L +L  L L  N L  +P 
Sbjct: 161 LKLDHNQIVSLPKEIEELQELKELILENNRFKNVPGEAL-QLKNLQKLNLSENQLVSIP- 218

Query: 284 DGFKDIPMLQ-----ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
              K+I  LQ     +LD +  I  LP       L +LQELYL   Q    P +I +L+ 
Sbjct: 219 ---KEILQLQNLRNLVLDRNQ-ITILP--TEVLQLQNLQELYLSENQFTSLPKEIDKLKN 272

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           LR L L+ N L ++P+    L +L  L+L +N ++ LP E+G L+ +LQ L LD NPL S
Sbjct: 273 LRWLSLNNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQLK-NLQRLELDSNPLSS 331



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 143/319 (44%), Gaps = 42/319 (13%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L   P+ IG    L RLDL  N +  +   I    +L E  + +N L+ LP E+ +L  L
Sbjct: 53  LTTFPKEIGQFKNLQRLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNLPKEIEQLKSL 112

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDL  NQL     E   L+ L  L+LS N L+ +P EIG++  L+ L L  N + +L 
Sbjct: 113 KNLDLFRNQLTTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVSLP 172

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
             +                            E+L  +        KEL LE      +P 
Sbjct: 173 KEI----------------------------EELQEL--------KELILENNRFKNVPG 196

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           E  +   + KL+LS N +  +P E+    +L+ L+L RN+I   P  +L  L +L  L L
Sbjct: 197 EALQLKNLQKLNLSENQLVSIPKEILQLQNLRNLVLDRNQITILPTEVL-QLQNLQELYL 255

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
             N    +P +    +  L+ L L+ N + +LP+      L +LQ L L   QL   P +
Sbjct: 256 SENQFTSLPKE-IDKLKNLRWLSLNNNRLTTLPK--EIGQLKNLQRLELGNNQLTNLPKE 312

Query: 333 ILRLQQLRILDLSQNSLQS 351
           I +L+ L+ L+L  N L S
Sbjct: 313 IGQLKNLQRLELDSNPLSS 331



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 138/280 (49%), Gaps = 18/280 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+ GN+LTVLS   I     L EL    N L  +P+ I  L  L  LDL +N++ +
Sbjct: 66  LQRLDLSGNELTVLSKE-IVQLQNLQELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLTT 124

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  +    +L +  +  N L+A+P E+G+L  L  L L  NQ+     E  +L+ L  L
Sbjct: 125 VPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVSLPKEIEELQELKEL 184

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL-LKYLRSRLPENEDS 178
            L NN    +P E  ++  L+KL L+ N        LV+ P   L L+ LR+ +    D 
Sbjct: 185 ILENNRFKNVPGEALQLKNLQKLNLSEN-------QLVSIPKEILQLQNLRNLVL---DR 234

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
              T    L T   +L    +EL L     +++P EI +   +  L L+ N +  LP E+
Sbjct: 235 NQITI---LPTEVLQLQ-NLQELYLSENQFTSLPKEIDKLKNLRWLSLNNNRLTTLPKEI 290

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
               +LQ L L  N++ + P  I   L +L  L+LD+NPL
Sbjct: 291 GQLKNLQRLELGNNQLTNLPKEI-GQLKNLQRLELDSNPL 329



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 113/239 (47%), Gaps = 27/239 (11%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A + S   + L L   NL+  P EI +   + +LDLS N +  L  E+    +LQ L
Sbjct: 33  LTKALQNSSNVRVLDLSFQNLTTFPKEIGQFKNLQRLDLSGNELTVLSKEIVQLQNLQEL 92

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-------------------KD 288
            L  NK+ + P  I   L SL  L L  N L  VP +                     K+
Sbjct: 93  SLHSNKLTNLPKEI-EQLKSLKNLDLFRNQLTTVPKEVMLLQTLEKLNLSLNRLNAVPKE 151

Query: 289 IPM---LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
           I     LQIL L +N I SLP+      L  L+EL L   + +  P + L+L+ L+ L+L
Sbjct: 152 IGQLKNLQILKLDHNQIVSLPK--EIEELQELKELILENNRFKNVPGEALQLKNLQKLNL 209

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           S+N L SIP+    L +L  L L  N I+ LP E+  L+ +LQ L L  N   S+ + I
Sbjct: 210 SENQLVSIPKEILQLQNLRNLVLDRNQITILPTEVLQLQ-NLQELYLSENQFTSLPKEI 267


>gi|456825387|gb|EMF73783.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 428

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 180/368 (48%), Gaps = 43/368 (11%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ I  L  L +L L  NR+ ++P  I    +L E  + +N L+ LP E+GKL  L  L
Sbjct: 63  LPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRL 122

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL+ N+L    +E  +L+ L  L LS+N L+ LP E GK+  L++L L+ N L TL    
Sbjct: 123 DLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTL---- 178

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                P  +  L++                            + L+L+   L+ +  EI 
Sbjct: 179 -----PQEIGQLQNL---------------------------QTLNLKSNQLTTLFKEIE 206

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           +   +  L+LS N +  LP E+    +L TL LS N++      I   L +L  L L +N
Sbjct: 207 QLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI-GKLQNLHTLNLSDN 265

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            L  +P +  K +  L  L+LS N + +L        L +LQ+L L   QL     +I +
Sbjct: 266 QLTTLPIEIGK-LQNLHTLNLSGNQLTTLS--IEIGKLQNLQDLNLHSNQLTTLSKEIEQ 322

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L+ L+ L LS N L  +P+    L +L EL+L +N ++ALP E+G L+ +LQ L L  N 
Sbjct: 323 LKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQ-NLQTLSLYKNR 381

Query: 396 LRSIRRTI 403
           L +  + I
Sbjct: 382 LMTFPKEI 389



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 158/347 (45%), Gaps = 45/347 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+L  L    I     L EL  S N L  +P+ IG L  L RLDL+ NR+  
Sbjct: 73  LQKLYLFDNRLKTLPKE-IGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 61  IPSSISGCCSLAEFY-----------------------MGNNALSALPAELGKLSKLGTL 97
           +P  I    +L   Y                       + +N L+ LP E+G+L  L TL
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTL 191

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           +L SNQL     E  QL+ L  L+LS+N L+ LP EIGK+  L  L L+GN L TL   +
Sbjct: 192 NLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI 251

Query: 157 VNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 215
                   L+ L +  L +N+ +        L  + T        L+L G  L+ +  EI
Sbjct: 252 ------GKLQNLHTLNLSDNQLTTLPIEIGKLQNLHT--------LNLSGNQLTTLSIEI 297

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
            +   +  L+L  N +  L  E+    +LQTL LS N++   P  I   L +L  L L N
Sbjct: 298 GKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEI-GQLQNLQELNLWN 356

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 321
           N L  +P +    +  LQ L L  N + + P+      L +LQ LYL
Sbjct: 357 NQLTALPIE-IGQLQNLQTLSLYKNRLMTFPK--EIGQLKNLQTLYL 400



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 136/287 (47%), Gaps = 42/287 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS  + + LP EI ++  L+KL L  N L+TL         P  +  L++   
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTL---------PKEIGQLKNL-- 96

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                    +EL+L    L+ +P EI +   + +LDL  N +  
Sbjct: 97  -------------------------QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQTL LS N++   P      L +L  L L +N L  +P +    +  LQ
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRES-GKLENLQELNLSDNQLTTLPQE-IGQLQNLQ 189

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L+L  N + +L +      L +LQ L L   QL   P +I +LQ L  L+LS N L ++
Sbjct: 190 TLNLKSNQLTTLFK--EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTL 247

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
                 L +L  L+LSDN ++ LP E+G L+ +L  L L GN L ++
Sbjct: 248 SIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQ-NLHTLNLSGNQLTTL 293



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 120/225 (53%), Gaps = 8/225 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           ++ EA T  +  +T A +  +  + L L G N + +P EI +   + KL L  N ++ LP
Sbjct: 30  DEVEAGTYMD--LTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLP 87

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L LS N++   P  I   L +L  L L +N L  +P +  K +  LQ L
Sbjct: 88  KEIGQLKNLQELNLSSNQLTILPKEI-GKLENLQRLDLYDNRLTILPIEIGK-LQNLQTL 145

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
            LS N + +LP       L +LQEL L   QL   P +I +LQ L+ L+L  N L ++ +
Sbjct: 146 YLSSNQLTTLPRES--GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFK 203

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
             + L +L  L+LSDN ++ LP E+G L+ +L  L L GN L ++
Sbjct: 204 EIEQLKNLQTLNLSDNQLTTLPIEIGKLQ-NLHTLNLSGNQLTTL 247



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 85/180 (47%), Gaps = 27/180 (15%)

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           LDLS  +   LP E+    +LQ L L  N++K  P  I   L +L  L L +N L  +P 
Sbjct: 53  LDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEI-GQLKNLQELNLSSNQLTILPK 111

Query: 284 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
           +                            L +LQ L L   +L   P +I +LQ L+ L 
Sbjct: 112 E-------------------------IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLY 146

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           LS N L ++P     L +L EL+LSDN ++ LP E+G L+ +LQ L L  N L ++ + I
Sbjct: 147 LSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQ-NLQTLNLKSNQLTTLFKEI 205



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 4/111 (3%)

Query: 292 LQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
           +++LDLS  N  +LP+      L +LQ+LYL   +L+  P +I +L+ L+ L+LS N L 
Sbjct: 50  VRVLDLSGQNFTTLPK--EIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLT 107

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
            +P+    L +L  LDL DN ++ LP E+G L+ +LQ L L  N L ++ R
Sbjct: 108 ILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQ-NLQTLYLSSNQLTTLPR 157


>gi|388329668|gb|AFK29223.1| scribbled, partial [Drosophila buzzatii]
          Length = 499

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 179/388 (46%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L+RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETIS-----QLTKLKRLDLGDNE-------IEDLPPYLGYLP-NLHELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+    SL  L L++N ++  PD I +
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLDLAQNLLETLPDGI-S 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NETLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I  + +L  L++ +N+L+ +P      ++L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGNMTKLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 104/191 (54%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L +L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPNLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 124/245 (50%), Gaps = 14/245 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +    +L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPNLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E    + L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLDLAQNLLETLPDGISKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N      L      L EN  SE   +    I   T+LS  
Sbjct: 268 RLTILKLDQNRLQRLNETLGNCENMQELI-----LTENFLSELPAS----IGNMTKLS-- 316

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L+++   L  +P EI +   +  L L  N +++LPPEL +C  L  L +S N++   
Sbjct: 317 --NLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYL 374

Query: 258 PDAIL 262
           P +++
Sbjct: 375 PYSLV 379



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 156/360 (43%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V 
Sbjct: 199 NLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDV- 228

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
                                        S N ++ELP E+    SL  L L++N ++  
Sbjct: 229 -----------------------------SENRLEELPNEIGGMVSLTDLDLAQNLLETL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I + LS L+ LKLD N L+++ ++   +   +Q L L+ N  S LP +    ++  L
Sbjct: 260 PDGI-SKLSRLTILKLDQNRLQRL-NETLGNCENMQELILTENFLSELPAS--IGNMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 SNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 1/125 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L ++ N+L  L N  + +   + ELI ++N L+ +P +IG++++L  L++ +N +  
Sbjct: 269 LTILKLDQNRLQRL-NETLGNCENMQELILTENFLSELPASIGNMTKLSNLNVDRNALEY 327

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P  I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + 
Sbjct: 328 LPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW 387

Query: 121 LSNNS 125
           LS N 
Sbjct: 388 LSENQ 392


>gi|45656719|ref|YP_000805.1| hypothetical protein LIC10828 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084288|ref|ZP_15545151.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102963|ref|ZP_15563565.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599955|gb|AAS69442.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367278|gb|EKP22664.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433188|gb|EKP77536.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 378

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 143/300 (47%), Gaps = 23/300 (7%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N L  +P+ I  L  L  L L+ N++ + P  I    SL + Y+ NN L+ LP E+G+
Sbjct: 78  SDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQ 137

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  L+L +NQLK    E  QL+ L  L L NN L+ L  EIGK+  L+ L L+ N L
Sbjct: 138 LQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQL 197

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMN 207
            T    +  G    L              E   +   L T    +    K   L L    
Sbjct: 198 TTFPKEI--GKLQNL-------------QELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQ 242

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+ IP+EI +  ++ +L+L  N +  +P E+    +LQ L LS N+ K  P      L +
Sbjct: 243 LTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIP-VEFGQLKN 301

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L LD N L  +P +  K +  L++L+L  N + ++P+      L +LQ LYLR  Q 
Sbjct: 302 LKMLSLDANQLTALPKEIGK-LKNLKMLNLDANQLTTIPK--EIGQLQNLQTLYLRNNQF 358



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 152/326 (46%), Gaps = 43/326 (13%)

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
            L  LP ++G+L  L  LDL  NQL     E  QL+ L  L L+ N L+  P EI ++ +
Sbjct: 58  KLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKS 117

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L KL L+ N L  L         P  +  L++                            
Sbjct: 118 LHKLYLSNNQLTIL---------PVEIGQLQNL--------------------------- 141

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           +EL+L    L  I  EI +   + KL L  N +  L  E+    +L++L LS N++  +P
Sbjct: 142 QELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFP 201

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
             I   L +L  L L NN L   P +  K +  LQ L L  N + ++P       L  LQ
Sbjct: 202 KEI-GKLQNLQELYLSNNQLTTFPKEIGK-LQKLQWLGLGDNQLTTIPN--EIGKLQKLQ 257

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           EL L   QL   P +I +LQ L++L LS N  ++IP  F  L +L  L L  N ++ALP 
Sbjct: 258 ELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPK 317

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
           E+G L+ +L+ L LD N L +I + I
Sbjct: 318 EIGKLK-NLKMLNLDANQLTTIPKEI 342



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 107/212 (50%), Gaps = 4/212 (1%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L    L  +P +I +   +  LDLS N +  LP E+    +LQ L
Sbjct: 39  LTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 98

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 307
            L+ N++  +P  I   L SL  L L NN L  +P +    +  LQ L+L +N      +
Sbjct: 99  FLNYNQLTTFPKEI-EQLKSLHKLYLSNNQLTILPVE-IGQLQNLQELNL-WNNQLKTIS 155

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                L +LQ+LYL   QL     +I +LQ L+ L LS N L + P+    L +L EL L
Sbjct: 156 KEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYL 215

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           S+N ++  P E+G L+  LQ L L  N L +I
Sbjct: 216 SNNQLTTFPKEIGKLQ-KLQWLGLGDNQLTTI 246


>gi|428169759|gb|EKX38690.1| hypothetical protein GUITHDRAFT_76958, partial [Guillardia theta
           CCMP2712]
          Length = 551

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 131/378 (34%), Positives = 183/378 (48%), Gaps = 29/378 (7%)

Query: 6   VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS- 64
           + GN+LT +     ++   LT L  S N L  +P  I S+  LI L    N++ +IPS  
Sbjct: 191 LSGNQLTTIPTGFFSNMMSLTSLDLSSNELTSLPSGILSIRSLIFLYASGNQLTAIPSGF 250

Query: 65  ISGCCSLAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDL 121
            SG  SL    + +N L++LPA L   L  L +L L SNQL  +          L  LDL
Sbjct: 251 FSGLNSLQRLDLSSNKLTSLPAGLFANLIILDSLSLASNQLASFSAGFFSTLNSLKTLDL 310

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
           S+N L  +P +I  +TTL  L L+GN L T+ +   +     ++      L  NE     
Sbjct: 311 SSNQLKAIPADISTLTTLTTLKLSGNQLTTIPTGFFSN----MMSLTSLDLSSNE----- 361

Query: 182 TTKEDLITMATRLSVTS-KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                L ++ +   +T    L L  + L+ +P EI     +  LDLS N +  +P    S
Sbjct: 362 -----LTSLPSGTQLTGLGTLKLASLQLTTVPVEILSMKRLATLDLSSNKLASIPANFFS 416

Query: 241 CASLQTLI---LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
             SLQTL    LSRN +   P  I +SL  L+ L L  N L  +P DG   +  L+ LDL
Sbjct: 417 --SLQTLTFLDLSRNYLVSLPVGI-SSLKGLTTLHLSGNQLASIP-DGVLSLTNLKNLDL 472

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL-RLQQLRILDLSQNSLQSIPEG 355
           S N + SLP    F++L  L++L L   QL   P      L+ L  LDLS N   S+P G
Sbjct: 473 SSNKLQSLPAG-TFTNLSSLEDLSLSSNQLASLPPGFFATLRSLTTLDLSNNKFTSLPPG 531

Query: 356 FKNLTSLTELDLSDNNIS 373
            ++LTSL  L L +N IS
Sbjct: 532 IESLTSLKYLYLQNNLIS 549



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 131/413 (31%), Positives = 194/413 (46%), Gaps = 47/413 (11%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP-SSISGCCSLAEFYMGNNAL 81
           T L  L  S N +   P  I SL+RL  L L  NR+ SIP  S      L +  +  N L
Sbjct: 66  TSLQSLDLSTNKIATFPAEISSLTRLRFLHLASNRLTSIPGGSFDKLIFLTQLDLSVNLL 125

Query: 82  SAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTT 138
           +++ P     L+ L TL L SNQL  +         RL  +DLS+N L  +P +I  +TT
Sbjct: 126 TSIPPGAFDALTSLTTLSLSSNQLASFPTGTFTNLQRLEQMDLSSNQLKAIPADISTLTT 185

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L  L L+GN L T+       PT      +     +   +E ++    ++++ + +    
Sbjct: 186 LTTLKLSGNQLTTI-------PTGFFSNMMSLTSLDLSSNELTSLPSGILSIRSLI---- 234

Query: 199 KELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKD 256
             L   G  L+AIPS  +     + +LDLS N +  LP  L ++   L +L L+ N++  
Sbjct: 235 -FLYASGNQLTAIPSGFFSGLNSLQRLDLSSNKLTSLPAGLFANLIILDSLSLASNQLAS 293

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSD-----------------------GFKDIPMLQ 293
           +     ++L+SL  L L +N L+ +P+D                        F ++  L 
Sbjct: 294 FSAGFFSTLNSLKTLDLSSNQLKAIPADISTLTTLTTLKLSGNQLTTIPTGFFSNMMSLT 353

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            LDLS N + SLP     + L  L  L L  +QL   P +IL +++L  LDLS N L SI
Sbjct: 354 SLDLSSNELTSLPSG---TQLTGLGTLKLASLQLTTVPVEILSMKRLATLDLSSNKLASI 410

Query: 353 PEG-FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
           P   F +L +LT LDLS N + +LP  +  L+  L  L L GN L SI   +L
Sbjct: 411 PANFFSSLQTLTFLDLSRNYLVSLPVGISSLK-GLTTLHLSGNQLASIPDGVL 462



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 136/423 (32%), Positives = 199/423 (47%), Gaps = 33/423 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRIL 59
           +++LD+  N LT +      + T LT L  S N L   P  T  +L RL ++DL  N++ 
Sbjct: 115 LTQLDLSVNLLTSIPPGAFDALTSLTTLSLSSNQLASFPTGTFTNLQRLEQMDLSSNQLK 174

Query: 60  SIPSSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 117
           +IP+ IS   +L    +  N L+ +P      +  L +LDL SN+L         +R L 
Sbjct: 175 AIPADISTLTTLTTLKLSGNQLTTIPTGFFSNMMSLTSLDLSSNELTSLPSGILSIRSLI 234

Query: 118 VLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPEN 175
            L  S N L+ +P      + +L++L L+ N L +L + L      A L  L S  L  N
Sbjct: 235 FLYASGNQLTAIPSGFFSGLNSLQRLDLSSNKLTSLPAGLF-----ANLIILDSLSLASN 289

Query: 176 EDSEASTTKEDLITMATRLSVTSKELS----------------LEGMNLSAIPSEIWE-A 218
           + +  S      +     L ++S +L                 L G  L+ IP+  +   
Sbjct: 290 QLASFSAGFFSTLNSLKTLDLSSNQLKAIPADISTLTTLTTLKLSGNQLTTIPTGFFSNM 349

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
             +T LDLS N +  LP   +    L TL L+  ++   P  IL S+  L+ L L +N L
Sbjct: 350 MSLTSLDLSSNELTSLPSG-TQLTGLGTLKLASLQLTTVPVEIL-SMKRLATLDLSSNKL 407

Query: 279 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
             +P++ F  +  L  LDLS N + SLP     SSL  L  L+L   QL   P  +L L 
Sbjct: 408 ASIPANFFSSLQTLTFLDLSRNYLVSLPVG--ISSLKGLTTLHLSGNQLASIPDGVLSLT 465

Query: 338 QLRILDLSQNSLQSIPEG-FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            L+ LDLS N LQS+P G F NL+SL +L LS N +++LPP       SL  L L  N  
Sbjct: 466 NLKNLDLSSNKLQSLPAGTFTNLSSLEDLSLSSNQLASLPPGFFATLRSLTTLDLSNNKF 525

Query: 397 RSI 399
            S+
Sbjct: 526 TSL 528



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 108/223 (48%), Gaps = 7/223 (3%)

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPELS 239
           S +   ++T     + +   L +   N   +P+ +      +  LDLS N I   P E+S
Sbjct: 27  SVSNSGVVTRQGNCAYSCINLQISNSNAYLVPAGVLNNLTSLQSLDLSTNKIATFPAEIS 86

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           S   L+ L L+ N++   P      L  L+ L L  N L  +P   F  +  L  L LS 
Sbjct: 87  SLTRLRFLHLASNRLTSIPGGSFDKLIFLTQLDLSVNLLTSIPPGAFDALTSLTTLSLSS 146

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG-FK 357
           N +AS P    F++L  L+++ L   QL+  P DI  L  L  L LS N L +IP G F 
Sbjct: 147 NQLASFPTGT-FTNLQRLEQMDLSSNQLKAIPADISTLTTLTTLKLSGNQLTTIPTGFFS 205

Query: 358 NLTSLTELDLSDNNISALPPELGLLE-PSLQALRLDGNPLRSI 399
           N+ SLT LDLS N +++LP   G+L   SL  L   GN L +I
Sbjct: 206 NMMSLTSLDLSSNELTSLPS--GILSIRSLIFLYASGNQLTAI 246



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 134/295 (45%), Gaps = 40/295 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTEL-IASKNLLNGMPETIGSLSRLIRLDLHQNRIL 59
           + +LD+  NKLT L   L A+  +L  L +AS  L +       +L+ L  LDL  N++ 
Sbjct: 257 LQRLDLSSNKLTSLPAGLFANLIILDSLSLASNQLASFSAGFFSTLNSLKTLDLSSNQLK 316

Query: 60  SIPSSIS------------------------GCCSLAEFYMGNNALSALPAELGKLSKLG 95
           +IP+ IS                           SL    + +N L++LP+   +L+ LG
Sbjct: 317 AIPADISTLTTLTTLKLSGNQLTTIPTGFFSNMMSLTSLDLSSNELTSLPSG-TQLTGLG 375

Query: 96  TLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTL- 152
           TL L S QL    VE   + RL+ LDLS+N L+ +P      + TL  L L+ N L +L 
Sbjct: 376 TLKLASLQLTTVPVEILSMKRLATLDLSSNKLASIPANFFSSLQTLTFLDLSRNYLVSLP 435

Query: 153 --RSSLVNGPTPALLKYLRSRLPEN-------EDSEASTTKEDLITMATRLSVTSKELSL 203
              SSL    T  L     + +P+        ++ + S+ K   +   T  +++S E   
Sbjct: 436 VGISSLKGLTTLHLSGNQLASIPDGVLSLTNLKNLDLSSNKLQSLPAGTFTNLSSLEDLS 495

Query: 204 EGMN-LSAIPSEIWEA-GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
              N L+++P   +     +T LDLS N    LPP + S  SL+ L L  N I +
Sbjct: 496 LSSNQLASLPPGFFATLRSLTTLDLSNNKFTSLPPGIESLTSLKYLYLQNNLISN 550


>gi|294956203|ref|XP_002788852.1| leucine-rich repeat-containing protein 32 precursor, putative
           [Perkinsus marinus ATCC 50983]
 gi|239904464|gb|EER20648.1| leucine-rich repeat-containing protein 32 precursor, putative
           [Perkinsus marinus ATCC 50983]
          Length = 582

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 131/400 (32%), Positives = 194/400 (48%), Gaps = 27/400 (6%)

Query: 24  MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
            L EL  SKN L  +P+ +   S+L  +DL  N+++  P       +LA  Y   N+L +
Sbjct: 201 FLEELDLSKNSLTAIPD-LRCCSQLGNIDLSHNKLVHWPRLGEKVHTLAFSY---NSLES 256

Query: 84  LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKL 142
            P        L TL L +N++K        L +L  LD+SNN +S +P E+G++ +L K+
Sbjct: 257 PPEAALLPPALVTLLLDNNKVKGVPGGVFALDKLKTLDMSNNDISRVPSELGRLPSLTKV 316

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 202
            L GNP+R +  +++   +  LLK LR RL  +E S     +E L+T     +   K L 
Sbjct: 317 ALDGNPIRNVPMAVLRQGSAGLLKLLRERLGPDEVS-VDDVQEALMTEVRNATHGGKRLD 375

Query: 203 LEGMNLS-AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
           L    L   IP E+ +A  +  LDLSRN + E+   L S  +L  L++S N +K   DA+
Sbjct: 376 LSNRRLGPGIPEEVLQAEGLLVLDLSRNMVAEIE-VLKSLDTLLRLVMSHNVLKTI-DAL 433

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--IASLPENPPFSSLPHLQEL 319
             +  +L  L + NN L ++P  G   +P L   D S N  + SLP++        L+EL
Sbjct: 434 --NYPALQELDISNNKLTKLP--GEISLPQLVQFDASCNRELISLPKSL-LMGCAKLREL 488

Query: 320 YLRRMQLREAPTDIL---RLQQLRILDLSQNSLQSIPEGF--KNLTSLTELDLSDNNISA 374
                 L     D L       L +LDLS N    IP       L  L  L L++N I+ 
Sbjct: 489 RAGNCCLHS--WDFLPNPEHPHLEVLDLSNNRFTDIPTDLVPTRLPGLQTLLLANNAIAT 546

Query: 375 LPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
           LPP LG    +L++L L+GNP+    R +     KA L Y
Sbjct: 547 LPPSLG-RATALRSLTLEGNPISCYIRLLF---AKARLLY 582



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 141/336 (41%), Gaps = 106/336 (31%)

Query: 185 EDLITMATRLSVTSKELSLEGMNLSAIPSEI-------------WEAGEITKLDLSRNSI 231
           E  I  A + +  S  L+L    L+ +P ++             W+   I K+D+S N I
Sbjct: 16  EATIEAALKRAFASGSLNLASAGLTTVPQQLEKLDTFTLDGVSWWQCNSIEKVDISGNEI 75

Query: 232 QELP-------PELSSC-----------------ASLQTLILSRNKIKDWPDAILTSLSS 267
           +E+P       P+  S                  A L++L+L RNK+  +P +   S SS
Sbjct: 76  REIPTGLFEHIPDCRSFNASDNRIESLPIALLGLAKLKSLLLIRNKLTIFPTS--ESPSS 133

Query: 268 LSCLKLDNNPLRQVPSDGFKDI-PMLQILDLSYN-IASLPENPPFS-------------- 311
           L  ++L +N L ++P  GF D+ P +Q L + +N + +L E  P                
Sbjct: 134 LVEVRLSHNSLCELPR-GFADVLPNVQALSIDHNHLVNLDEPLPTQLRVLLASSNELVSI 192

Query: 312 -----SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL----------------- 349
                 L  L+EL L +  L   P D+    QL  +DLS N L                 
Sbjct: 193 RGVGDGLDFLEELDLSKNSLTAIP-DLRCCSQLGNIDLSHNKLVHWPRLGEKVHTLAFSY 251

Query: 350 --------------------------QSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
                                     + +P G   L  L  LD+S+N+IS +P ELG L 
Sbjct: 252 NSLESPPEAALLPPALVTLLLDNNKVKGVPGGVFALDKLKTLDMSNNDISRVPSELGRL- 310

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           PSL  + LDGNP+R++   +L +G+  +LK L++++
Sbjct: 311 PSLTKVALDGNPIRNVPMAVLRQGSAGLLKLLRERL 346



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 174/428 (40%), Gaps = 82/428 (19%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + K+D+ GN++  +   L           AS N +  +P  +  L++L  L L +N++  
Sbjct: 65  IEKVDISGNEIREIPTGLFEHIPDCRSFNASDNRIESLPIALLGLAKLKSLLLIRNKLTI 124

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSN-----------QLKEYC 108
            P+S S   SL E  + +N+L  LP      L  +  L +  N           QL+   
Sbjct: 125 FPTSESPS-SLVEVRLSHNSLCELPRGFADVLPNVQALSIDHNHLVNLDEPLPTQLRVLL 183

Query: 109 VEACQL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
             + +L            L  LDLS NSL+ +P ++   + L  + L+ N        LV
Sbjct: 184 ASSNELVSIRGVGDGLDFLEELDLSKNSLTAIP-DLRCCSQLGNIDLSHN-------KLV 235

Query: 158 NGPTPALLKYLRSRLPENEDSEA-STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
           + P          RL E   + A S    +    A  L      L L+   +  +P  ++
Sbjct: 236 HWP----------RLGEKVHTLAFSYNSLESPPEAALLPPALVTLLLDNNKVKGVPGGVF 285

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
              ++  LD+S N I  +P EL    SL  + L  N I++ P A+L    S   LKL   
Sbjct: 286 ALDKLKTLDMSNNDISRVPSELGRLPSLTKVALDGNPIRNVPMAVLRQ-GSAGLLKLLRE 344

Query: 277 PL--RQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
            L   +V  D  ++  M ++ + ++    L             +L  RR+     P ++L
Sbjct: 345 RLGPDEVSVDDVQEALMTEVRNATHGGKRL-------------DLSNRRLG-PGIPEEVL 390

Query: 335 RLQQLRILDLSQNSLQSIPEGFK---------------------NLTSLTELDLSDNNIS 373
           + + L +LDLS+N +  I E  K                     N  +L ELD+S+N ++
Sbjct: 391 QAEGLLVLDLSRNMVAEI-EVLKSLDTLLRLVMSHNVLKTIDALNYPALQELDISNNKLT 449

Query: 374 ALPPELGL 381
            LP E+ L
Sbjct: 450 KLPGEISL 457


>gi|291242572|ref|XP_002741180.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 308

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 162/325 (49%), Gaps = 19/325 (5%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +P+ IG    L +L+L  N+I  IP S+     L E  +  NAL+A+P E+ KL 
Sbjct: 1   NGLTIVPQEIGECHELQKLNLSSNKIEKIPESLYALEQLTELNVRYNALTAIPDEISKLK 60

Query: 93  KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
            +  L+L SN++ +     C L +L+ L +  N+L+ +P EIGK+ +L  L L  N +  
Sbjct: 61  NMKILNLSSNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSLNILKLNNNKIAK 120

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
           +  SL      AL +     +     S+A T   D I     + +    L L+   +  I
Sbjct: 121 IPDSLC-----ALEQLTELYM----GSDALTAIPDAIGKLKSMKI----LKLDENEIEKI 167

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P  +    ++T+L++  N++  +P E+    S++ L L  NK    PD+ L +L  L+ L
Sbjct: 168 PDSLCALEQLTELNMKYNALTAIPDEIGKLKSMKILNLRSNKFAKIPDS-LCALEQLTEL 226

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
            + +N L  +P D    +  ++ L+LS N I  +P++    +L  L EL ++   L   P
Sbjct: 227 NMKSNALTSIP-DEISKLKSMKTLNLSANTIEKIPDS--LCALEQLTELNMKYNALTAIP 283

Query: 331 TDILRLQQLRILDLSQNSLQSIPEG 355
            +I +L+ ++IL+L  N    IP+ 
Sbjct: 284 DEIGKLKSMKILNLKSNKFAKIPDS 308



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 157/308 (50%), Gaps = 18/308 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL++  NK+  +  +L A    LTEL    N L  +P+ I  L  +  L+L  N+I  
Sbjct: 16  LQKLNLSSNKIEKIPESLYA-LEQLTELNVRYNALTAIPDEISKLKNMKILNLSSNKIAK 74

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP S+     L E YM  NAL+A+P E+GKL  L  L L++N++ +     C L +L+ L
Sbjct: 75  IPDSLCALEQLTELYMEYNALTAIPDEIGKLKSLNILKLNNNKIAKIPDSLCALEQLTEL 134

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            + +++L+ +P  IGK+ +++ L L  N +  +  SL      AL +     +  N    
Sbjct: 135 YMGSDALTAIPDAIGKLKSMKILKLDENEIEKIPDSLC-----ALEQLTELNMKYN---- 185

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           A T   D I     + +    L+L     + IP  +    ++T+L++  N++  +P E+S
Sbjct: 186 ALTAIPDEIGKLKSMKI----LNLRSNKFAKIPDSLCALEQLTELNMKSNALTSIPDEIS 241

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              S++TL LS N I+  PD+ L +L  L+ L +  N L  +P D    +  ++IL+L  
Sbjct: 242 KLKSMKTLNLSANTIEKIPDS-LCALEQLTELNMKYNALTAIP-DEIGKLKSMKILNLKS 299

Query: 300 N-IASLPE 306
           N  A +P+
Sbjct: 300 NKFAKIPD 307



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 130/261 (49%), Gaps = 15/261 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M  L++  NK+  + ++L A    LTEL    N L  +P+ IG L  L  L L+ N+I  
Sbjct: 62  MKILNLSSNKIAKIPDSLCA-LEQLTELYMEYNALTAIPDEIGKLKSLNILKLNNNKIAK 120

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP S+     L E YMG++AL+A+P  +GKL  +  L L  N++++     C L +L+ L
Sbjct: 121 IPDSLCALEQLTELYMGSDALTAIPDAIGKLKSMKILKLDENEIEKIPDSLCALEQLTEL 180

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           ++  N+L+ +P EIGK+ +++ L L  N    +  SL           L      N  S 
Sbjct: 181 NMKYNALTAIPDEIGKLKSMKILNLRSNKFAKIPDSLC---------ALEQLTELNMKSN 231

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           A T+  D I+    +    K L+L    +  IP  +    ++T+L++  N++  +P E+ 
Sbjct: 232 ALTSIPDEISKLKSM----KTLNLSANTIEKIPDSLCALEQLTELNMKYNALTAIPDEIG 287

Query: 240 SCASLQTLILSRNKIKDWPDA 260
              S++ L L  NK    PD+
Sbjct: 288 KLKSMKILNLKSNKFAKIPDS 308



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 169/327 (51%), Gaps = 28/327 (8%)

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKE-----YCVEACQLRLSVLDLSNNSLSGLPPEI 133
           N L+ +P E+G+  +L  L+L SN++++     Y +E    +L+ L++  N+L+ +P EI
Sbjct: 1   NGLTIVPQEIGECHELQKLNLSSNKIEKIPESLYALE----QLTELNVRYNALTAIPDEI 56

Query: 134 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 193
            K+  ++ L L+ N +  +  SL      AL +     +  N    A T   D I     
Sbjct: 57  SKLKNMKILNLSSNKIAKIPDSLC-----ALEQLTELYMEYN----ALTAIPDEIGKLKS 107

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++    L L    ++ IP  +    ++T+L +  +++  +P  +    S++ L L  N+
Sbjct: 108 LNI----LKLNNNKIAKIPDSLCALEQLTELYMGSDALTAIPDAIGKLKSMKILKLDENE 163

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 312
           I+  PD+ L +L  L+ L +  N L  +P D    +  ++IL+L  N  A +P++    +
Sbjct: 164 IEKIPDS-LCALEQLTELNMKYNALTAIP-DEIGKLKSMKILNLRSNKFAKIPDS--LCA 219

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  L EL ++   L   P +I +L+ ++ L+LS N+++ IP+    L  LTEL++  N +
Sbjct: 220 LEQLTELNMKSNALTSIPDEISKLKSMKTLNLSANTIEKIPDSLCALEQLTELNMKYNAL 279

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
           +A+P E+G L+ S++ L L  N    I
Sbjct: 280 TAIPDEIGKLK-SMKILNLKSNKFAKI 305


>gi|260806243|ref|XP_002597994.1| hypothetical protein BRAFLDRAFT_221597 [Branchiostoma floridae]
 gi|229283264|gb|EEN54006.1| hypothetical protein BRAFLDRAFT_221597 [Branchiostoma floridae]
          Length = 343

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 173/377 (45%), Gaps = 48/377 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL----GKLSKLGTLDLHSNQLKE 106
           + L  N++ ++P  IS    L E Y+  N    +P E+      ++ L T+DL   +L  
Sbjct: 5   IHLSDNKLETLPDGIS-RLQLHELYLEKNRFKKIPEEVYLQPKVVNGLLTIDLSGKRLTS 63

Query: 107 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
              E    + +  LDLSNN L+ +P EIG++  LR+L L  N L  L  ++         
Sbjct: 64  VPAEVFDSKDVERLDLSNNRLTSIPEEIGQLQKLRELKLDNNLLTQLPQAI--------- 114

Query: 166 KYLRSRLPENEDSEASTTK-EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
               + LP  +  + S  K E L    +RL +   EL L       IP E+ +  ++   
Sbjct: 115 ----TTLPNLQHIDVSDNKLETLPDGISRLQL--HELFLHDNRFKEIPEEVCKLLQLNTF 168

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
            LS   +  +P E+     ++ L+LS N++   P+ I   L  L  LKL+NN L ++P  
Sbjct: 169 YLSGKGLTSVPAEVFDATDIERLVLSENRLTSIPEEI-GQLQKLRELKLENNLLTELPQ- 226

Query: 285 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
               +P LQ +D+S+N                         L   P  I  L+QL  L++
Sbjct: 227 AITTLPNLQHIDVSHNNG-----------------------LESLPGGIGELEQLGYLNI 263

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
           + N   S+PE    L+++ +L LSDN IS LP  L  L  +L+ + + GNPL      + 
Sbjct: 264 AGNKFTSVPEQIMMLSNIGKLILSDNKISRLPVTLSRL-ATLKDMNITGNPLTYPPADVC 322

Query: 405 DRGTKAVLKYLKDKIPE 421
            +GT A++ +L+ +  E
Sbjct: 323 KKGTAAIMDFLRRETKE 339



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 2/160 (1%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG- 77
           +   T +  L+ S+N L  +PE IG L +L  L L  N +  +P +I+   +L    +  
Sbjct: 182 VFDATDIERLVLSENRLTSIPEEIGQLQKLRELKLENNLLTELPQAITTLPNLQHIDVSH 241

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 136
           NN L +LP  +G+L +LG L++  N+      +   L  +  L LS+N +S LP  + ++
Sbjct: 242 NNGLESLPGGIGELEQLGYLNIAGNKFTSVPEQIMMLSNIGKLILSDNKISRLPVTLSRL 301

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 176
            TL+ + +TGNPL    + +    T A++ +LR    E E
Sbjct: 302 ATLKDMNITGNPLTYPPADVCKKGTAAIMDFLRRETKEGE 341



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 121/277 (43%), Gaps = 44/277 (15%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  +     + RLDL  NR+ SIP  I     L E  + NN L+ LP  +  L  L
Sbjct: 61  LTSVPAEVFDSKDVERLDLSNNRLTSIPEEIGQLQKLRELKLDNNLLTQLPQAITTLPNL 120

Query: 95  GTLD----------------------LHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPP 131
             +D                      LH N+ KE   E C+ L+L+   LS   L+ +P 
Sbjct: 121 QHIDVSDNKLETLPDGISRLQLHELFLHDNRFKEIPEEVCKLLQLNTFYLSGKGLTSVPA 180

Query: 132 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN----EDSEASTTKEDL 187
           E+   T + +L+L+ N L ++   +        L+ LR    EN    E  +A TT  +L
Sbjct: 181 EVFDATDIERLVLSENRLTSIPEEI------GQLQKLRELKLENNLLTELPQAITTLPNL 234

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
                 + V+          L ++P  I E  ++  L+++ N    +P ++   +++  L
Sbjct: 235 ----QHIDVSHNN------GLESLPGGIGELEQLGYLNIAGNKFTSVPEQIMMLSNIGKL 284

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           ILS NKI   P   L+ L++L  + +  NPL   P+D
Sbjct: 285 ILSDNKISRLP-VTLSRLATLKDMNITGNPLTYPPAD 320



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 17/235 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  +DV  NKL  L + +  S   L EL    N    +PE +  L +L    L    + S
Sbjct: 120 LQHIDVSDNKLETLPDGI--SRLQLHELFLHDNRFKEIPEEVCKLLQLNTFYLSGKGLTS 177

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ +     +    +  N L+++P E+G+L KL  L L +N L E       L  L  +
Sbjct: 178 VPAEVFDATDIERLVLSENRLTSIPEEIGQLQKLRELKLENNLLTELPQAITTLPNLQHI 237

Query: 120 DLS-NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           D+S NN L  LP  IG++  L  L + GN   ++   ++      L    +  L +N+ S
Sbjct: 238 DVSHNNGLESLPGGIGELEQLGYLNIAGNKFTSVPEQIM-----MLSNIGKLILSDNKIS 292

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
               T   L T+        K++++ G  L+  P+++ + G    +D  R   +E
Sbjct: 293 RLPVTLSRLATL--------KDMNITGNPLTYPPADVCKKGTAAIMDFLRRETKE 339



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 10/161 (6%)

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF---KDIPMLQILDLS- 298
           +LQ + LS NK++  PD I  S   L  L L+ N  +++P + +   K +  L  +DLS 
Sbjct: 1   NLQLIHLSDNKLETLPDGI--SRLQLHELYLEKNRFKKIPEEVYLQPKVVNGLLTIDLSG 58

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
             + S+P    F S   ++ L L   +L   P +I +LQ+LR L L  N L  +P+    
Sbjct: 59  KRLTSVPAE-VFDS-KDVERLDLSNNRLTSIPEEIGQLQKLRELKLDNNLLTQLPQAITT 116

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L +L  +D+SDN +  LP  +  L+  L  L L  N  + I
Sbjct: 117 LPNLQHIDVSDNKLETLPDGISRLQ--LHELFLHDNRFKEI 155


>gi|355686423|gb|AER98051.1| erbb2 interacting protein [Mustela putorius furo]
          Length = 1093

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 5   VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 64

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 65  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 124

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 125 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTM-----NRLTQLERLDLGSNEFTE 179

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 180 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 231

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 232 ACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLVSIEELDCSF 289

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 290 NEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 349

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 350 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 389



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 213 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 271

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 272 LPDSIGGLVSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 331

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 332 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 369



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 14  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 72

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 73  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 118

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 119 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 176

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 177 FTEVPE-VLEQLSGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDVSKNNIEMIEEG-ISA 232

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 233 CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEV 292

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 293 EALPSSVGQL-TNIRTFAADHNYLQQL 318


>gi|198437403|ref|XP_002124871.1| PREDICTED: similar to soc-2 (suppressor of clear) homolog [Ciona
           intestinalis]
          Length = 954

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 192/412 (46%), Gaps = 43/412 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I  +  L  L  SKN L  +P +I +L  L  L+   N+++ +P 
Sbjct: 63  LDVSDNRLKSLDQE-IGDFANLKTLNCSKNKLRFLPTSICALEFLTELNATYNQLIVLPR 121

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
           +I  C  L      +N L ALP  +G +  L  LD+ +N LK       Q+R  V++ S+
Sbjct: 122 NIYKCSMLTTIRAAHNKLRALPTSIGSIPTLLMLDVGNNALKSLPKSVYQIR-KVINCSS 180

Query: 124 NSLSGLP-PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           N L  LP PE  K  +  +L+                           R  E   +E  +
Sbjct: 181 NKLHRLPEPETKKSKSGLQLI---------------------------RCIEASHNEIES 213

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
              +L +  T L    + LSL    L+ +P  I E  ++  +D+ +NS+ E+P    + +
Sbjct: 214 LPRNL-SFLTNL----QSLSLSNNQLTELPQNIGELQKLITVDVCQNSLSEIPDSFGNLS 268

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +L+ L L  NK+   P++ ++ L  L  L    N ++ +P +  K I  LQ +DLS N I
Sbjct: 269 NLRLLDLRENKLTTLPES-MSRLEDLITLDCAGNQIKTIPEE-LKQIKSLQNIDLSANQI 326

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
            S+   P  S++ +L  + L R  +     DI  +  +  L+LS+N L  +P+   N+ S
Sbjct: 327 ESV---PTLSNMSNLVTVDLSRNAI-STLGDIEDMPSMENLNLSENQLAKVPDSIGNIES 382

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
           L    L++N I  LP  +G L  SLQ + +  N L S+  ++   GT  +LK
Sbjct: 383 LENFRLANNQIQELPQTIGNLS-SLQFIDVSNNQLTSLNTSLRRLGTLEILK 433



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 141/300 (47%), Gaps = 47/300 (15%)

Query: 105 KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164
           KE+    C+  L  LD+S+N L  L  EIG    L+ L  + N LR L +S+        
Sbjct: 49  KEFDRWGCEKYLIGLDVSDNRLKSLDQEIGDFANLKTLNCSKNKLRFLPTSI------CA 102

Query: 165 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
           L++L         +E + T   LI +                     P  I++   +T +
Sbjct: 103 LEFL---------TELNATYNQLIVL---------------------PRNIYKCSMLTTI 132

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
             + N ++ LP  + S  +L  L +  N +K  P ++      ++C    +N L ++P  
Sbjct: 133 RAAHNKLRALPTSIGSIPTLLMLDVGNNALKSLPKSVYQIRKVINC---SSNKLHRLPEP 189

Query: 285 GFKD----IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
             K     + +++ ++ S+N I SLP N  F  L +LQ L L   QL E P +I  LQ+L
Sbjct: 190 ETKKSKSGLQLIRCIEASHNEIESLPRNLSF--LTNLQSLSLSNNQLTELPQNIGELQKL 247

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
             +D+ QNSL  IP+ F NL++L  LDL +N ++ LP  +  LE  L  L   GN +++I
Sbjct: 248 ITVDVCQNSLSEIPDSFGNLSNLRLLDLRENKLTTLPESMSRLE-DLITLDCAGNQIKTI 306



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 177/388 (45%), Gaps = 49/388 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L+L +N++  +P SI    SL  F + NN +  LP  +G LS L  +D+ +NQL      
Sbjct: 363 LNLSENQLAKVPDSIGNIESLENFRLANNQIQELPQTIGNLSSLQFIDVSNNQLTSLNTS 422

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L  L +L   NN L+ LP   G + +LR++ L+ N L TL   + NGP P  +K L+
Sbjct: 423 LRRLGTLEILKAGNNQLTTLPQPFGFLRSLREVDLSNNKLNTL---VGNGPLPRGIKRLK 479

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELS----------------LEGMNLSAIPS 213
           +     +         +L  + T L ++S E++                LE   L ++P 
Sbjct: 480 ANGNLFKGKVPGRVLHEL-RLLTVLDLSSSEITSLPDSIGRLRLLQNLNLENNQLHSLPE 538

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
                  +  ++LS+N+I++LP  L +   L T+  + NK+ + P+  L  L  L+ L +
Sbjct: 539 SSETMYSLKDINLSKNAIKKLPQNLHNWKRLVTMNAAHNKLAEMPEN-LHQLPVLATLDM 597

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN----IASLPENPPFSSLPH-------------- 315
            NN L Q+ ++ F  +  L++L L  N    I     +   SS  H              
Sbjct: 598 SNNELEQIDANIF-HMSRLKVLRLQNNRINRINKTTNDVTLSSSLHEVDFSGNELEELLE 656

Query: 316 -LQELYLRRM------QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 368
            ++ L   R       +L E P DI +L+    L+ S+N +Q IP+    L S+    L+
Sbjct: 657 DMEVLSSVRWFDASCNKLSEIPEDIHKLKWATYLNFSENKIQKIPKKVDRLKSIENFKLA 716

Query: 369 DNNISALPPELGLLEPSLQALRLDGNPL 396
           +N I+ +P  +   +  L  L + GN +
Sbjct: 717 NNQITQIPQNIKRCK-HLSHLDITGNSI 743



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 194/434 (44%), Gaps = 52/434 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  N+LT L  N I     L  +   +N L+ +P++ G+LS L  LDL +N++ +
Sbjct: 224 LQSLSLSNNQLTELPQN-IGELQKLITVDVCQNSLSEIPDSFGNLSNLRLLDLRENKLTT 282

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P S+S    L       N +  +P EL ++  L  +DL +NQ++     +    L  +D
Sbjct: 283 LPESMSRLEDLITLDCAGNQIKTIPEELKQIKSLQNIDLSANQIESVPTLSNMSNLVTVD 342

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           LS N++S L  +I  M ++  L L+ N L  +  S+  G   +L  +   RL  N+  E 
Sbjct: 343 LSRNAISTL-GDIEDMPSMENLNLSENQLAKVPDSI--GNIESLENF---RLANNQIQEL 396

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
             T  +L ++        + + +    L+++ + +   G +  L    N +  LP     
Sbjct: 397 PQTIGNLSSL--------QFIDVSNNQLTSLNTSLRRLGTLEILKAGNNQLTTLPQPFGF 448

Query: 241 CASLQTLILSRNKIKD------WPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPMLQ 293
             SL+ + LS NK+         P  I         LK + N  + +VP     ++ +L 
Sbjct: 449 LRSLREVDLSNNKLNTLVGNGPLPRGI-------KRLKANGNLFKGKVPGRVLHELRLLT 501

Query: 294 ILDLSYN-IASLPEN--------------PPFSSLPH-------LQELYLRRMQLREAPT 331
           +LDLS + I SLP++                  SLP        L+++ L +  +++ P 
Sbjct: 502 VLDLSSSEITSLPDSIGRLRLLQNLNLENNQLHSLPESSETMYSLKDINLSKNAIKKLPQ 561

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           ++   ++L  ++ + N L  +PE    L  L  LD+S+N +  +   +  +   L+ LRL
Sbjct: 562 NLHNWKRLVTMNAAHNKLAEMPENLHQLPVLATLDMSNNELEQIDANIFHMS-RLKVLRL 620

Query: 392 DGNPLRSIRRTILD 405
             N +  I +T  D
Sbjct: 621 QNNRINRINKTTND 634



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 184/433 (42%), Gaps = 75/433 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M  L++  N+L  + ++ I +   L     + N +  +P+TIG+LS L  +D+  N++ S
Sbjct: 360 MENLNLSENQLAKVPDS-IGNIESLENFRLANNQIQELPQTIGNLSSLQFIDVSNNQLTS 418

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA--------- 111
           + +S+    +L     GNN L+ LP   G L  L  +DL +N+L                
Sbjct: 419 LNTSLRRLGTLEILKAGNNQLTTLPQPFGFLRSLREVDLSNNKLNTLVGNGPLPRGIKRL 478

Query: 112 ----------------CQLRL-SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 154
                            +LRL +VLDLS++ ++ LP  IG++  L+ L L  N L +L  
Sbjct: 479 KANGNLFKGKVPGRVLHELRLLTVLDLSSSEITSLPDSIGRLRLLQNLNLENNQLHSLPE 538

Query: 155 S---LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
           S   + +     L K    +LP+N  +      + L+TM    +            L+ +
Sbjct: 539 SSETMYSLKDINLSKNAIKKLPQNLHNW-----KRLVTMNAAHN-----------KLAEM 582

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI----KDWPDAILTS--- 264
           P  + +   +  LD+S N ++++   +   + L+ L L  N+I    K   D  L+S   
Sbjct: 583 PENLHQLPVLATLDMSNNELEQIDANIFHMSRLKVLRLQNNRINRINKTTNDVTLSSSLH 642

Query: 265 ------------------LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
                             LSS+       N L ++P D  K +     L+ S N I  +P
Sbjct: 643 EVDFSGNELEELLEDMEVLSSVRWFDASCNKLSEIPEDIHK-LKWATYLNFSENKIQKIP 701

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
           +      L  ++   L   Q+ + P +I R + L  LD++ NS+   P+GF  +  L EL
Sbjct: 702 K--KVDRLKSIENFKLANNQITQIPQNIKRCKHLSHLDITGNSISDFPQGFFKMRKLNEL 759

Query: 366 DLSDNNISALPPE 378
               N ++   PE
Sbjct: 760 LSQGNPLTCKLPE 772


>gi|29791785|gb|AAH50692.1| ERBB2IP protein, partial [Homo sapiens]
          Length = 633

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTM-----NRLTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQL-TNLRTFAADHNYLQQL 337


>gi|348553819|ref|XP_003462723.1| PREDICTED: protein LAP2-like isoform 3 [Cavia porcellus]
          Length = 1301

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 188/400 (47%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+A
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE SE
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFSE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLMSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   +  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388


>gi|417406386|gb|JAA49853.1| Putative cytoskeletal regulator flightless-i [Desmodus rotundus]
          Length = 1369

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD S+N+I+ +   +S
Sbjct: 199 VPEVLEQLNGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ LILS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLILSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLVSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD   N + ++    I++   L +LI S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDFSKNNIEMVEEG-ISACENLQDLILSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 151/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  L+ L    +D N L  +P  GF   +  L  LD S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLNGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDFSKNNIEMVEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLILSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NIRTFAADHNYLQQL 337


>gi|365920060|ref|ZP_09444414.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
 gi|364578571|gb|EHM55771.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
          Length = 412

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 162/336 (48%), Gaps = 43/336 (12%)

Query: 18  LIASWTMLTELIA-------------SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 64
           L+  W  LTEL A             + N LN +P TIG LS L +L L  N+++ +P +
Sbjct: 75  LVLFWGDLTELPAEIGQLNNLQKLDLTGNQLNTLPATIGQLSNLQKLSLGDNQLVILPVA 134

Query: 65  ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 123
           I    +L E  + +N L+ LPA +G+L  L  L+L  N+L        QL  L  L L +
Sbjct: 135 IGQLGNLQELDLWHNQLTVLPATIGQLGNLQVLNLRENKLTTLPAGIGQLGNLQKLSLGS 194

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPENEDSEA 180
           N L+ LP EIG++  L++L+L  + L TL      L N     LL +  + LP N   + 
Sbjct: 195 NRLTTLPAEIGQLHNLQELILCEDQLTTLPVEIGQLGNLQKLYLLGHQLAALP-NSIGQL 253

Query: 181 STTKE---------DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 231
           S  +          +LI M   L    K LSL   NL+ +P++I +   + KLDLS N I
Sbjct: 254 SNLQSITIDSHLLLELIDMVPHLP-KLKYLSLR--NLTTLPTKIGQLSNLQKLDLSDNQI 310

Query: 232 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS--DGFKDI 289
             LP  +   ++LQ L LS NK+   PD I   L +L  L L  N L  +P   D   ++
Sbjct: 311 TALPDAIGQLSNLQKLNLSGNKLTALPDVI-GQLDNLQELDLSGNKLATLPESIDQLHNL 369

Query: 290 PMLQILD--LSYNIASLPENPPFSSLPHLQELYLRR 323
            ++ + D  L YN+  LP +        +Q LY +R
Sbjct: 370 QIINLRDNMLGYNLDVLPNS--------IQRLYHKR 397



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 173/368 (47%), Gaps = 68/368 (18%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P  IG LS L  L L    +  +P+ I    +L +  +  N L+ LPA +G+LS L  L
Sbjct: 62  LPAEIGQLSNLQELVLFWGDLTELPAEIGQLNNLQKLDLTGNQLNTLPATIGQLSNLQKL 121

Query: 98  DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            L  NQL    V   QL  L  LDL +N L+ LP  IG++  L+ L L  N L TL    
Sbjct: 122 SLGDNQLVILPVAIGQLGNLQELDLWHNQLTVLPATIGQLGNLQVLNLRENKLTTL---- 177

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                PA +  L +                            ++LSL    L+ +P+EI 
Sbjct: 178 -----PAGIGQLGNL---------------------------QKLSLGSNRLTTLPAEIG 205

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           +   + +L L  + +  LP E+    +LQ L L  +++   P++I   LS+L  + +D++
Sbjct: 206 QLHNLQELILCEDQLTTLPVEIGQLGNLQKLYLLGHQLAALPNSI-GQLSNLQSITIDSH 264

Query: 277 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL-YLRRMQLREAPTDILR 335
            L             L+++D+               +PHL +L YL    L   PT I +
Sbjct: 265 LL-------------LELIDM---------------VPHLPKLKYLSLRNLTTLPTKIGQ 296

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L  L+ LDLS N + ++P+    L++L +L+LS N ++ALP  +G L+ +LQ L L GN 
Sbjct: 297 LSNLQKLDLSDNQITALPDAIGQLSNLQKLNLSGNKLTALPDVIGQLD-NLQELDLSGNK 355

Query: 396 LRSIRRTI 403
           L ++  +I
Sbjct: 356 LATLPESI 363



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 26/176 (14%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
            + +P+EI +   + +L L    + ELP E+    +LQ L L+ N++   P A +  LS+
Sbjct: 59  FALLPAEIGQLSNLQELVLFWGDLTELPAEIGQLNNLQKLDLTGNQLNTLP-ATIGQLSN 117

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L  L L +N L  +P                              L +LQEL L   QL 
Sbjct: 118 LQKLSLGDNQLVILPV-------------------------AIGQLGNLQELDLWHNQLT 152

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             P  I +L  L++L+L +N L ++P G   L +L +L L  N ++ LP E+G L 
Sbjct: 153 VLPATIGQLGNLQVLNLRENKLTTLPAGIGQLGNLQKLSLGSNRLTTLPAEIGQLH 208


>gi|417406440|gb|JAA49878.1| Putative cytoskeletal regulator flightless-i [Desmodus rotundus]
          Length = 1417

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD S+N+I+ +   +S
Sbjct: 199 VPEVLEQLNGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ LILS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLILSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLVSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD   N + ++    I++   L +LI S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDFSKNNIEMVEEG-ISACENLQDLILSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 151/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  L+ L    +D N L  +P  GF   +  L  LD S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLNGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDFSKNNIEMVEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLILSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NIRTFAADHNYLQQL 337


>gi|359319031|ref|XP_003638976.1| PREDICTED: protein LAP2-like isoform 1 [Canis lupus familiaris]
          Length = 1372

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLVSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDVSKNNIEMIEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N I
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEI 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NIRTFAADHNYLQQL 337


>gi|324500914|gb|ADY40414.1| Protein lap1 [Ascaris suum]
          Length = 1136

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 175/365 (47%), Gaps = 21/365 (5%)

Query: 21  SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 80
           S + L EL    N +  +PE +    +L  L L QN+IL +P +I    +L E ++ +N 
Sbjct: 35  SASCLEELYLDCNQICEIPEGLCRCKKLRSLSLGQNKILRVPPAIGSLIALEELHLEDNE 94

Query: 81  LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL 139
           LS LP EL K S L  LDL  N L        +L  L+ L L   SL+ LPP+I ++  L
Sbjct: 95  LSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQNL 154

Query: 140 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTS 198
           R L +  N LR L       P    LK+LR   L  NE S        L  +        
Sbjct: 155 RSLDVRENQLRIL------PPAICQLKHLRELDLGRNELSHLPLNMGSLEVL-------- 200

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L ++   LSA+P  +   G +  LD+S+N +  LP E+     L  L ++ N+I   P
Sbjct: 201 EDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALP 260

Query: 259 DAILTSLSSLSCLKLDNNPLRQ-VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           ++I   L +L  LK D+N L + VP+ G +   +L++   +  + +LP       L  L 
Sbjct: 261 NSI-GRLKNLVTLKADSNALTELVPTIG-ECSSLLELYLFNNQLTTLPAT--IGGLKELS 316

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +   QL E P+ I    +L IL L  N L+ +P     L +L  LDL DN ++ LP 
Sbjct: 317 VLSIDENQLEEIPSAIGGCSKLSILTLRGNRLRELPLEVGRLANLRVLDLCDNILAFLPF 376

Query: 378 ELGLL 382
            + +L
Sbjct: 377 TINVL 381



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 158/362 (43%), Gaps = 44/362 (12%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I S   L EL    N L+ +PE +   S L  LDL  N +  +P  ++   SL   Y+  
Sbjct: 79  IGSLIALEELHLEDNELSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTHLYLFE 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LP ++ +L  L +LD+  NQL+      CQL+ L  LDL  N LS LP  +G + 
Sbjct: 139 TSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLRELDLGRNELSHLPLNMGSLE 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L +  N L  +  SL +        +LR+            ++ DL  +   +   
Sbjct: 199 VLEDLYVDHNVLSAVPDSLTS------CGHLRT---------LDVSQNDLTALPKEIGDL 243

Query: 198 SK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
            +  ELS+    ++A+P+ I     +  L    N++ EL P +  C+SL  L L  N++ 
Sbjct: 244 EQLCELSIAENRIAALPNSIGRLKNLVTLKADSNALTELVPTIGECSSLLELYLFNNQLT 303

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 315
             P A +  L  LS L +D N L ++PS                                
Sbjct: 304 TLP-ATIGGLKELSVLSIDENQLEEIPS-------------------------AIGGCSK 337

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           L  L LR  +LRE P ++ RL  LR+LDL  N L  +P     L +L  L LS +  S L
Sbjct: 338 LSILTLRGNRLRELPLEVGRLANLRVLDLCDNILAFLPFTINVLFNLRALWLSVDQTSPL 397

Query: 376 PP 377
            P
Sbjct: 398 VP 399



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 111/214 (51%), Gaps = 11/214 (5%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQT 246
            T + R+ V  K       NL  +P+E+  +   + +L L  N I E+P  L  C  L++
Sbjct: 9   FTCSGRVDVIEKR----QCNLHELPAEVERSASCLEELYLDCNQICEIPEGLCRCKKLRS 64

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLP 305
           L L +NKI   P AI  SL +L  L L++N L  +P +  K    L+ILDL  N+   LP
Sbjct: 65  LSLGQNKILRVPPAI-GSLIALEELHLEDNELSDLPEELVK-CSNLKILDLRLNLLTRLP 122

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
           +    + L  L  LYL    L + P DI +LQ LR LD+ +N L+ +P     L  L EL
Sbjct: 123 D--VVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLREL 180

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           DL  N +S LP  +G LE  L+ L +D N L ++
Sbjct: 181 DLGRNELSHLPLNMGSLE-VLEDLYVDHNVLSAV 213



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 157/349 (44%), Gaps = 29/349 (8%)

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQLR-LSV 118
           +P + SG   + E    N  L  LPAE+ +  S L  L L  NQ+ E     C+ + L  
Sbjct: 7   VPFTCSGRVDVIEKRQCN--LHELPAEVERSASCLEELYLDCNQICEIPEGLCRCKKLRS 64

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY---LRSRLPEN 175
           L L  N +  +PP IG +  L +L L  N L  L   LV      +L     L +RLP+ 
Sbjct: 65  LSLGQNKILRVPPAIGSLIALEELHLEDNELSDLPEELVKCSNLKILDLRLNLLTRLPD- 123

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                         + TRLS  +  L L   +L+ +P +I +   +  LD+  N ++ LP
Sbjct: 124 --------------VVTRLSSLT-HLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILP 168

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
           P +     L+ L L RN++   P   + SL  L  L +D+N L  VP D       L+ L
Sbjct: 169 PAICQLKHLRELDLGRNELSHLP-LNMGSLEVLEDLYVDHNVLSAVP-DSLTSCGHLRTL 226

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           D+S N + +LP+      L  L EL +   ++   P  I RL+ L  L    N+L  +  
Sbjct: 227 DVSQNDLTALPKE--IGDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADSNALTELVP 284

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
                +SL EL L +N ++ LP  +G L+  L  L +D N L  I   I
Sbjct: 285 TIGECSSLLELYLFNNQLTTLPATIGGLK-ELSVLSIDENQLEEIPSAI 332



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 4/151 (2%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N LT L    I     L EL  ++N +  +P +IG L  L+ L    N +  +  
Sbjct: 226 LDVSQNDLTALPKE-IGDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADSNALTELVP 284

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDL 121
           +I  C SL E Y+ NN L+ LPA +G L +L  L +  NQL+E    +  C  +LS+L L
Sbjct: 285 TIGECSSLLELYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAIGGCS-KLSILTL 343

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
             N L  LP E+G++  LR L L  N L  L
Sbjct: 344 RGNRLRELPLEVGRLANLRVLDLCDNILAFL 374



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 130/281 (46%), Gaps = 18/281 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N LT L + ++   + LT L   +  L  +P  I  L  L  LD+ +N++  +P 
Sbjct: 111 LDLRLNLLTRLPD-VVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPP 169

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDL 121
           +I     L E  +G N LS LP  +G L  L  L +  N L      + +C   L  LD+
Sbjct: 170 AICQLKHLRELDLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAVPDSLTSCG-HLRTLDV 228

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
           S N L+ LP EIG +  L +L +  N +  L         P  +  L++ +    DS A 
Sbjct: 229 SQNDLTALPKEIGDLEQLCELSIAENRIAAL---------PNSIGRLKNLVTLKADSNAL 279

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
           T     I   + L     EL L    L+ +P+ I    E++ L +  N ++E+P  +  C
Sbjct: 280 TELVPTIGECSSL----LELYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAIGGC 335

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           + L  L L  N++++ P  +   L++L  L L +N L  +P
Sbjct: 336 SKLSILTLRGNRLRELPLEV-GRLANLRVLDLCDNILAFLP 375


>gi|301767856|ref|XP_002919341.1| PREDICTED: protein LAP2-like isoform 2 [Ailuropoda melanoleuca]
          Length = 1372

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLVSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDVSKNNIEMIEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NMRTFAADHNYLQQL 337


>gi|348553817|ref|XP_003462722.1| PREDICTED: protein LAP2-like isoform 2 [Cavia porcellus]
          Length = 1381

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 188/400 (47%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+A
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE SE
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFSE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLMSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   +  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388


>gi|296475861|tpg|DAA17976.1| TPA: erbb2 interacting protein isoform 2 [Bos taurus]
          Length = 1302

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+A
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 GCENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLVSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N + ++    I+    L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDISKNNIEMVEEG-ISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N L ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 24/251 (9%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 312
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRL 219

Query: 373 SALPPELGLLE 383
           + +P  +G L+
Sbjct: 220 TFIPGFIGSLK 230



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 40/257 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T +   ++   + L E     N L  +P  IGSL +L  LD+ +N I  
Sbjct: 186 LERLDLGSNEFTEVPE-VLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEM 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-- 118
           +   ISGC +L +  + +N+L  LP  +G L  + TL +  NQL  Y  ++    +S+  
Sbjct: 245 VEEGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLM-YLPDSIGGLVSIEE 303

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LD S N L  LP  IG++T +R      N                   YL+   PE    
Sbjct: 304 LDCSFNELEALPSSIGQLTNIRTFAADHN-------------------YLQQLPPE---- 340

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                    I     ++V    L L    L  +P E+ +  ++  ++LS N ++ LP   
Sbjct: 341 ---------IGSWKNITV----LFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 239 SSCASLQTLILSRNKIK 255
           +    L  + LS N+ K
Sbjct: 388 TKLQQLTAMWLSDNQSK 404


>gi|328715133|ref|XP_001943098.2| PREDICTED: leucine-rich repeat-containing protein 7-like
           [Acyrthosiphon pisum]
          Length = 566

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 173/354 (48%), Gaps = 19/354 (5%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L +L+ S N +  +P  +    +L  L +  NR+  +P +I    +L E  +  N LS +
Sbjct: 47  LEKLLLSSNHIKDLPSPLFHCGQLKVLHISDNRLEHLPKAIGSLVNLVELDVSRNYLSTI 106

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
              +    KL  L+L +N +  + +   Q L L  L L++  L  +P  IG++  LR L 
Sbjct: 107 DENIKNCKKLSILNLSANPISIFPIPLTQVLSLEELCLNDTQLEFIPANIGRLINLRVLE 166

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N +     S +      L++  R  + +N+  +  T   DL  +         EL +
Sbjct: 167 LRDNKI-----SQIPKAVSRLMQLYRLDIGQNDFIDFPTAISDLYGL--------HELWI 213

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +  ++  IPSE+    E+   D S N I ++  ++  C+ L+ L LS N +K  P++ + 
Sbjct: 214 DSNDIVDIPSEVSNLHELWYFDASYNRISKIDQDIQFCSKLKDLHLSFNNLKSLPNS-MK 272

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
            L  L  LK+D+N L+Q+ S  F+ +  L+ LD SYN + +L  +P    +  L  L L 
Sbjct: 273 HLHDLVTLKVDHNCLKQMNS-IFEGLQCLEELDASYNCLETL--SPTVGLMRRLITLRLD 329

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             +L   PT+I   + LR L L  N+L S+P+G  +L +L  L L+ N I+ LP
Sbjct: 330 ANRLTSLPTEICSCRSLRELSLRSNNLSSMPDGIGSLQNLVVLMLTQNKITNLP 383



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 98/201 (48%), Gaps = 7/201 (3%)

Query: 201 LSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           + +   +L  +P  I+     + KL LS N I++LP  L  C  L+ L +S N+++  P 
Sbjct: 26  IDMNNSDLVDVPLHIFLYERTLEKLLLSSNHIKDLPSPLFHCGQLKVLHISDNRLEHLPK 85

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 318
           AI  SL +L  L +  N L  +  +  K+   L IL+LS N I+  P   P + +  L+E
Sbjct: 86  AI-GSLVNLVELDVSRNYLSTI-DENIKNCKKLSILNLSANPISIFP--IPLTQVLSLEE 141

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L L   QL   P +I RL  LR+L+L  N +  IP+    L  L  LD+  N+    P  
Sbjct: 142 LCLNDTQLEFIPANIGRLINLRVLELRDNKISQIPKAVSRLMQLYRLDIGQNDFIDFPTA 201

Query: 379 LGLLEPSLQALRLDGNPLRSI 399
           +  L   L  L +D N +  I
Sbjct: 202 ISDLY-GLHELWIDSNDIVDI 221



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 95/216 (43%), Gaps = 32/216 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L V+ N L  + N++      L EL AS N L  +  T+G + RLI L L  NR+ S+P+
Sbjct: 280 LKVDHNCLKQM-NSIFEGLQCLEELDASYNCLETLSPTVGLMRRLITLRLDANRLTSLPT 338

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C SL E  + +N LS++P  +G L                        L VL L+ 
Sbjct: 339 EICSCRSLRELSLRSNNLSSMPDGIGSLQN----------------------LVVLMLTQ 376

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGN---PLRTLRSSLVNGPTPALLK-YLRSRLPENEDS- 178
           N ++ LP  + K+  L  L L+ N   PL  L++   +     +L  YL   LP+ E+S 
Sbjct: 377 NKITNLPLSVLKLKNLNALWLSENQSKPLTPLQNDYEHETGKHILTCYL---LPQREESY 433

Query: 179 -EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
            E        +   TR+  T      E  NL  +P+
Sbjct: 434 IEIKDQNHKPLKTNTRIRFTEDSGLEEPGNLMRVPT 469


>gi|444724187|gb|ELW64799.1| Leucine-rich repeat and IQ domain-containing protein 4 [Tupaia
           chinensis]
          Length = 561

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 185/431 (42%), Gaps = 41/431 (9%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL-SIPSSIS----------------- 66
           L  L  +KN L G+   +G+LS L  LDL  N  L S P  IS                 
Sbjct: 74  LQVLYLNKNNLTGLCPELGALSSLEGLDLSYNPFLPSFPHVISSLRALRELRLYQTDLRE 133

Query: 67  ---GCC----SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 118
              G C     L    +  N L +LP E+   +KL  + L  N+L+ +  E C L  L V
Sbjct: 134 LPVGICKNLHHLELLGLARNHLKSLPKEVVNQTKLREIYLKQNELEVFPQELCVLCNLEV 193

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           +D+  N +  +P EIG +T L+KL    N L +L  SL      A+L    + L     S
Sbjct: 194 IDVDENRIHAIPEEIGHLTELQKLYAAHNRLPSLPESLCKCSKMAVLDVSHNLLHCIPHS 253

Query: 179 EASTTKEDLITMA-TRLSVTSK--------ELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
            A  T+   I ++  RL    +         L L    L A+       G +  LDLS+N
Sbjct: 254 LAGLTQMTEIGLSGNRLEKVPRLVCRWALHLLYLRDTGLWALRRSFKRLGSLRFLDLSQN 313

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF--K 287
            +   P ++ +  +L+ L L  NKI     +   SLS L  L L  N     P + F  +
Sbjct: 314 HLDHCPVQICALKNLEFLALDDNKIGQVLPSEFGSLSKLKILGLTGNEFSYFPEEIFSLE 373

Query: 288 DIPMLQI-LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
            +  L I  D    +  +PE+     L  L+ELY+    L   P  +  +  L +LD   
Sbjct: 374 SLEKLYIGQDQGSKLTCVPEH--IVKLQSLRELYIENNHLEYLPDALGSMPNLEVLDCRH 431

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDR 406
           N L+ +P+      +L EL L DN ++ LP +L  L  SL+ L L  NP+      +   
Sbjct: 432 NLLKQLPDAIIQAQALKELLLEDNLLTHLPEDLDHL-VSLRVLTLRNNPMEEPPIEVCAE 490

Query: 407 GTKAVLKYLKD 417
           G +A+  YLK+
Sbjct: 491 GNEAIWNYLKE 501



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 150/365 (41%), Gaps = 22/365 (6%)

Query: 44  SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 103
           S  R   +D     + +IP  I     L E ++ NN +  +P ++ +L  L  L L+ N 
Sbjct: 24  SADRTFFIDASNQNLTAIPLEILALKELEELHLENNQIEEIPQDIQRLKNLQVLYLNKNN 83

Query: 104 LKEYCVEACQL-RLSVLDLSNN-SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV-NGP 160
           L   C E   L  L  LDLS N  L   P  I  +  LR+L L    LR L   +  N  
Sbjct: 84  LTGLCPELGALSSLEGLDLSYNPFLPSFPHVISSLRALRELRLYQTDLRELPVGICKNLH 143

Query: 161 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 220
              LL   R+ L        S  KE  +   T+L    +E+ L+   L   P E+     
Sbjct: 144 HLELLGLARNHL-------KSLPKE--VVNQTKL----REIYLKQNELEVFPQELCVLCN 190

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
           +  +D+  N I  +P E+     LQ L  + N++   P++ L   S ++ L + +N L  
Sbjct: 191 LEVIDVDENRIHAIPEEIGHLTELQKLYAAHNRLPSLPES-LCKCSKMAVLDVSHNLLHC 249

Query: 281 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
           +P      +  +  + LS N   L + P       L  LYLR   L        RL  LR
Sbjct: 250 IPH-SLAGLTQMTEIGLSGN--RLEKVPRLVCRWALHLLYLRDTGLWALRRSFKRLGSLR 306

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS-ALPPELGLLEPSLQALRLDGNPLRSI 399
            LDLSQN L   P     L +L  L L DN I   LP E G L   L+ L L GN     
Sbjct: 307 FLDLSQNHLDHCPVQICALKNLEFLALDDNKIGQVLPSEFGSLS-KLKILGLTGNEFSYF 365

Query: 400 RRTIL 404
              I 
Sbjct: 366 PEEIF 370



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 162/381 (42%), Gaps = 72/381 (18%)

Query: 2   SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 61
           ++L+V   +L VL N        L  +   +N ++ +PE IG L+ L +L    NR+ S+
Sbjct: 176 NELEVFPQELCVLCN--------LEVIDVDENRIHAIPEEIGHLTELQKLYAAHNRLPSL 227

Query: 62  PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL 121
           P S+  C  +A   + +N L  +P  L  L+++  + L  N+L++     C+  L +L L
Sbjct: 228 PESLCKCSKMAVLDVSHNLLHCIPHSLAGLTQMTEIGLSGNRLEKVPRLVCRWALHLLYL 287

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
            +  L  L     ++ +LR L L+ N L            P  +  L++           
Sbjct: 288 RDTGLWALRRSFKRLGSLRFLDLSQNHL---------DHCPVQICALKN----------- 327

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
                       L++   ++         +PSE     ++  L L+ N     P E+ S 
Sbjct: 328 ---------LEFLALDDNKIG------QVLPSEFGSLSKLKILGLTGNEFSYFPEEIFSL 372

Query: 242 ASLQTLILSRN---KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
            SL+ L + ++   K+   P+ I+  L SL  L ++NN L  +P D    +P L++LD  
Sbjct: 373 ESLEKLYIGQDQGSKLTCVPEHIV-KLQSLRELYIENNHLEYLP-DALGSMPNLEVLDCR 430

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           +N+                        L++ P  I++ Q L+ L L  N L  +PE   +
Sbjct: 431 HNL------------------------LKQLPDAIIQAQALKELLLEDNLLTHLPEDLDH 466

Query: 359 LTSLTELDLSDNNISALPPEL 379
           L SL  L L +N +   P E+
Sbjct: 467 LVSLRVLTLRNNPMEEPPIEV 487



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 105/209 (50%), Gaps = 8/209 (3%)

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD-WPDAILTSL 265
           NL+AIP EI    E+ +L L  N I+E+P ++    +LQ L L++N +    P+  L +L
Sbjct: 37  NLTAIPLEILALKELEELHLENNQIEEIPQDIQRLKNLQVLYLNKNNLTGLCPE--LGAL 94

Query: 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP--FSSLPHLQELYLRR 323
           SSL  L L  NP   +PS       +  + +L      L E P     +L HL+ L L R
Sbjct: 95  SSLEGLDLSYNPF--LPSFPHVISSLRALRELRLYQTDLRELPVGICKNLHHLELLGLAR 152

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L+  P +++   +LR + L QN L+  P+    L +L  +D+ +N I A+P E+G L 
Sbjct: 153 NHLKSLPKEVVNQTKLREIYLKQNELEVFPQELCVLCNLEVIDVDENRIHAIPEEIGHL- 211

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAVL 412
             LQ L    N L S+  ++      AVL
Sbjct: 212 TELQKLYAAHNRLPSLPESLCKCSKMAVL 240



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 1/106 (0%)

Query: 7   EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 66
           +G+KLT +  +++   + L EL    N L  +P+ +GS+  L  LD   N +  +P +I 
Sbjct: 384 QGSKLTCVPEHIVKLQS-LRELYIENNHLEYLPDALGSMPNLEVLDCRHNLLKQLPDAII 442

Query: 67  GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 112
              +L E  + +N L+ LP +L  L  L  L L +N ++E  +E C
Sbjct: 443 QAQALKELLLEDNLLTHLPEDLDHLVSLRVLTLRNNPMEEPPIEVC 488


>gi|418701730|ref|ZP_13262652.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759294|gb|EKR25509.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 377

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 165/372 (44%), Gaps = 64/372 (17%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           LI S+  L  +P  IG L  L RL LH N++  +P  I    +L   Y+ +N L+ LP E
Sbjct: 51  LILSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE 110

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 147
           + +L                        L VLDL +N L+ LP EI ++  L+ L L  N
Sbjct: 111 IEQLK----------------------NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSN 148

Query: 148 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 207
            L TL   +                            E L  +        K L+L    
Sbjct: 149 RLTTLSKDI----------------------------EQLQNL--------KSLNLSNNQ 172

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+ +P+EI +   +  L LS N     P E+    +L+ L L+ N+I   P+ I   L  
Sbjct: 173 LTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEI-AKLKK 231

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L L +N L  +P +  + +  L+ LDLSYN +  LP+      L +LQ L LR  QL
Sbjct: 232 LQYLYLSDNQLITLPKE-IEQLKNLKSLDLSYNQLTILPK--EVGQLENLQTLDLRNNQL 288

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
           +  P +I +L+ L+ L LS N L  +P+    L +L  L L  N ++ LP E+  L+ +L
Sbjct: 289 KTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLK-NL 347

Query: 387 QALRLDGNPLRS 398
           Q L L  N   S
Sbjct: 348 QTLNLWNNQFSS 359



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 153/361 (42%), Gaps = 63/361 (17%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L  L    N L  +P+ I  L  L  L L  NR+ ++P+ I    +L    +G+
Sbjct: 65  IGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGS 124

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP E+ +L  L  L LHSN+L     +  QL+ L  L+LSNN L+ LP EI ++ 
Sbjct: 125 NQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLNLSNNQLTTLPNEIEQLK 184

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L+ L L+ N   T    +  G    L                                 
Sbjct: 185 NLKSLYLSENQFATFPKEI--GQLQNL--------------------------------- 209

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            K L L    ++ +P+EI +  ++  L LS N +  LP E+    +L++L LS N++   
Sbjct: 210 -KVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTIL 268

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P  +   L +L  L L NN L+ +P +                            L +LQ
Sbjct: 269 PKEV-GQLENLQTLDLRNNQLKTLPKE-------------------------IEQLKNLQ 302

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L+L   QL   P +I +L+ L  L L  N L ++P   + L +L  L+L +N  S+   
Sbjct: 303 TLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLNLWNNQFSSQEK 362

Query: 378 E 378
           E
Sbjct: 363 E 363



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 137/311 (44%), Gaps = 40/311 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L +  N+LT L N  I     L  L    N L  +P+ I  L  L  L LH NR+ ++  
Sbjct: 97  LYLRSNRLTTLPNE-IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSK 155

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    + NN L+ LP E+ +L  L +L L  NQ   +  E  QL+ L VL L+
Sbjct: 156 DIEQLQNLKSLNLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLN 215

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN ++ LP EI K+  L+ L L+ N L TL         P  ++ L++            
Sbjct: 216 NNQITILPNEIAKLKKLQYLYLSDNQLITL---------PKEIEQLKNL----------- 255

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                           K L L    L+ +P E+ +   +  LDL  N ++ LP E+    
Sbjct: 256 ----------------KSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLK 299

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           +LQTL LS N++   P  I   L +L  L L  N L  +P++  + +  LQ L+L  N  
Sbjct: 300 NLQTLFLSNNQLTILPQEI-GKLKNLLWLSLVYNQLTTLPNE-IEQLKNLQTLNLWNNQF 357

Query: 303 SLPENPPFSSL 313
           S  E      L
Sbjct: 358 SSQEKEKIRKL 368



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 137/291 (47%), Gaps = 42/291 (14%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL LS   L  LP EIG++  L++L L  N L  L   +       LL YLRS   
Sbjct: 46  LEVRVLILSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL-YLRSN-- 102

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                             L+ +P+EI +   +  LDL  N +  
Sbjct: 103 ---------------------------------RLTTLPNEIEQLKNLQVLDLGSNQLTV 129

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQ L L  N++      I   L +L  L L NN L  +P++  + +  L+
Sbjct: 130 LPQEIEQLKNLQLLYLHSNRLTTLSKDI-EQLQNLKSLNLSNNQLTTLPNE-IEQLKNLK 187

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L LS N  A+ P+      L +L+ L+L   Q+   P +I +L++L+ L LS N L ++
Sbjct: 188 SLYLSENQFATFPK--EIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITL 245

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P+  + L +L  LDLS N ++ LP E+G LE +LQ L L  N L+++ + I
Sbjct: 246 PKEIEQLKNLKSLDLSYNQLTILPKEVGQLE-NLQTLDLRNNQLKTLPKEI 295



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 27/190 (14%)

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAI----------------------LTSLSS 267
           + Q+L   L +   ++ LILSR ++K  P  I                      +  L +
Sbjct: 34  TYQDLTKALQNPLEVRVLILSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKN 93

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L L +N L  +P++  + +  LQ+LDL  N +  LP+      L +LQ LYL   +L
Sbjct: 94  LQLLYLRSNRLTTLPNE-IEQLKNLQVLDLGSNQLTVLPQ--EIEQLKNLQLLYLHSNRL 150

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
                DI +LQ L+ L+LS N L ++P   + L +L  L LS+N  +  P E+G L+ +L
Sbjct: 151 TTLSKDIEQLQNLKSLNLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQ-NL 209

Query: 387 QALRLDGNPL 396
           + L L+ N +
Sbjct: 210 KVLFLNNNQI 219



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 6/114 (5%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N L  +P+ +G L  L  LDL  N++ ++P  I    +L   ++ NN L+ LP E+GK
Sbjct: 261 SYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGK 320

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           L  L  L L  NQL     E  QL+ L  L+L NN  S    E      +RKLL
Sbjct: 321 LKNLLWLSLVYNQLTTLPNEIEQLKNLQTLNLWNNQFSSQEKE-----KIRKLL 369


>gi|301767858|ref|XP_002919342.1| PREDICTED: protein LAP2-like isoform 3 [Ailuropoda melanoleuca]
          Length = 1302

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 188/400 (47%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLVSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDVSKNNIEMIEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NMRTFAADHNYLQQL 337


>gi|20091139|ref|NP_617214.1| hypothetical protein MA2301 [Methanosarcina acetivorans C2A]
 gi|19916243|gb|AAM05694.1| hypothetical protein MA_2301 [Methanosarcina acetivorans C2A]
          Length = 631

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/273 (36%), Positives = 139/273 (50%), Gaps = 25/273 (9%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           LT L  S+N L  +P  I  L  L  L+L  N++  +PS I    SL  F +  N L+ L
Sbjct: 18  LTTLDLSENQLTQLPSEITELKNLTTLNLSGNQLTQLPSEIGELKSLTSFDLSVNQLTQL 77

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P E+G+L  L  L+++ NQL +   E  +L+ L+ LDLS N L+ LPPEIG++  L+ L 
Sbjct: 78  PPEIGELKNLTILNVYRNQLIQLLPEITELKNLTTLDLSLNKLTQLPPEIGELNNLKTLY 137

Query: 144 LTGNPLRTL---RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 200
            + N L  L    + L N     L   L  RLP     E +  K       T L+V   +
Sbjct: 138 SSSNQLTQLPLEITKLKNLTELYLSSNLMIRLP----LEITELKN-----LTTLNVYRNQ 188

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
                  L  +PS+I E   + KLDLSRN + +LPPE++   +L TL LSRN++   P  
Sbjct: 189 -------LIQLPSKITELKNLKKLDLSRNQLAQLPPEIAELKNLTTLDLSRNQLAQLPPE 241

Query: 261 ILTSLSSLSCLKLDNNPLRQVP----SDGFKDI 289
           I   L +L+ L L  NPL  +P    S G K I
Sbjct: 242 I-AELKNLTTLDLFENPLISLPPEIVSQGVKAI 273



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 153/349 (43%), Gaps = 88/349 (25%)

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 134
           +  N L+ LP+E+ +L  L TL+L  NQL +   E  +L+ L+  DLS N L+ LPPEIG
Sbjct: 23  LSENQLTQLPSEITELKNLTTLNLSGNQLTQLPSEIGELKSLTSFDLSVNQLTQLPPEIG 82

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
           ++  L  L +  N L  L                   LPE             IT    L
Sbjct: 83  ELKNLTILNVYRNQLIQL-------------------LPE-------------ITELKNL 110

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
             T+ +LSL    L+ +P EI E   +  L  S N + +LP E++   +L  L LS N +
Sbjct: 111 --TTLDLSLN--KLTQLPPEIGELNNLKTLYSSSNQLTQLPLEITKLKNLTELYLSSNLM 166

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 314
              P  I T L +L+ L +  N L Q+PS                           + L 
Sbjct: 167 IRLPLEI-TELKNLTTLNVYRNQLIQLPS-------------------------KITELK 200

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           +L++L L R QL + P +I  L+ L  LDLS+N L  +P     L +LT LDL +N + +
Sbjct: 201 NLKKLDLSRNQLAQLPPEIAELKNLTTLDLSRNQLAQLPPEIAELKNLTTLDLFENPLIS 260

Query: 375 LPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD-KIPEN 422
           LPPE                        I+ +G KA+  YLK  K  EN
Sbjct: 261 LPPE------------------------IVSQGVKAIFTYLKQSKTTEN 285


>gi|351711953|gb|EHB14872.1| Protein LAP2 [Heterocephalus glaber]
          Length = 1405

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 190/398 (47%), Gaps = 62/398 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+A
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ +  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETV-GSLKNVTTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLP--------------ENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQ 337
           N I +LP              ++     LP       ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSVGQLTNIRTFAADHNYLQQLPGEIGNWKNVTVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           +L++++LS N L+++P  F  L  LT + LSDN +S L
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQVSIL 406



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PET+GSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETVGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEIEALPSSVGQLTNIRTFAADHNYLQQLPGEIGNWKNVTVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 24/251 (9%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 312
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRL 219

Query: 373 SALPPELGLLE 383
           + +P  +G L+
Sbjct: 220 TFIPGFIGSLK 230



 Score = 39.3 bits (90), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 35/66 (53%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I +W  +T L    N L  +PE +G + +L  ++L  NR+ ++P S +    L   ++ +
Sbjct: 341 IGNWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSD 400

Query: 79  NALSAL 84
           N +S L
Sbjct: 401 NQVSIL 406


>gi|301609363|ref|XP_002934234.1| PREDICTED: protein LAP2 [Xenopus (Silurana) tropicalis]
          Length = 1359

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 188/405 (46%), Gaps = 72/405 (17%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTI 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  +    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEMVEDGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C SLQ L+LS N I+  P++I  +L  L+ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 GCESLQDLLLSSNAIQQLPESI-GALKKLTTLKVDENQLMYLP-DSIGGLTAIEDLDCSF 308

Query: 300 N-IASLPENPPFSSLPHLQE--------------------------LYLRRMQLREAPTD 332
           N I +LP     SS+ HL +                          L+L   +L   P +
Sbjct: 309 NEIEALP-----SSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVLFLHSNKLESLPEE 363

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +  +Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 364 MGDMQKLKVINLSDNRLRNLPFSFTRLQQLTAMWLSDNQSKPLIP 408



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 119/251 (47%), Gaps = 24/251 (9%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R LL+   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRNLLVRLVPCRCLRGE---EETVTSLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTILPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 312
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLDFLPAN--FGR 159

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKL 219

Query: 373 SALPPELGLLE 383
           + +P  LG L+
Sbjct: 220 TYIPGFLGNLK 230



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 40/257 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T +   ++   + L E     N L  +P  +G+L +L  LD+ +N I  
Sbjct: 186 LERLDLGSNEFTEVPE-VLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEM 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-- 118
           +   ISGC SL +  + +NA+  LP  +G L KL TL +  NQL  Y  ++     ++  
Sbjct: 245 VEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDENQLM-YLPDSIGGLTAIED 303

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LD S N +  LP  IG +  +R      N L                    ++LP     
Sbjct: 304 LDCSFNEIEALPSSIGHLIQIRTFAADHNFL--------------------TQLP----P 339

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E  T K   +            L L    L ++P E+ +  ++  ++LS N ++ LP   
Sbjct: 340 EIGTWKSATV------------LFLHSNKLESLPEEMGDMQKLKVINLSDNRLRNLPFSF 387

Query: 239 SSCASLQTLILSRNKIK 255
           +    L  + LS N+ K
Sbjct: 388 TRLQQLTAMWLSDNQSK 404


>gi|25396047|pir||A88684 protein AC7.2 [imported] - Caenorhabditis elegans
          Length = 613

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 221/466 (47%), Gaps = 62/466 (13%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI-----LSIPS 63
           NKLT L    I     L +L  S+N L  +P+++ SL  L  LDL  N++     L +PS
Sbjct: 147 NKLTCLPTE-IGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVIFLQVPS 205

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------------YC--- 108
            I    SL   ++  N + A+  ++G LSKL  LD+  N+++E             C   
Sbjct: 206 VIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVS 265

Query: 109 ----------VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
                     +  C   L+ LDL +N LS LP  IGK+  L ++ +  N +R + S L +
Sbjct: 266 YNHLTRVPEEIGDCH-SLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELES 324

Query: 159 GPTPALLKYLRSR-----LPEN------EDSEASTTKEDLITM---ATRLSVTSKELSLE 204
                L +++        LP N      +    + ++ +L        +  V++  +++E
Sbjct: 325 --CQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINME 382

Query: 205 GMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
              +S IP  I+ +A  +TKL+L  N +  LP ++ S  S+  L LS N++K  P+ I  
Sbjct: 383 HNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDI-E 441

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            L +L  L L NN L+++P+       + ++      + ++P    F  L HL +L+++ 
Sbjct: 442 KLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGF--LQHLTKLWVQS 499

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGF--------KNLTSLTELDLSDN-NISA 374
            ++   P  I  L  L+ L L +N+L +IPE           +L SL  L L+DN ++  
Sbjct: 500 NKILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGEFLVHISSHLDSLKSLYLNDNSSLHN 559

Query: 375 LPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           LP EL L + SL+ + ++ +PL  I   I   G   V++YLK + P
Sbjct: 560 LPFELALCQ-SLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGP 604



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E N+++ +   + +  T LT+L   +N L  +P  +GS + +  L+L  N++  +P 
Sbjct: 379 INMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPE 438

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    + NN L  LP ++G L+KL  LDL  N+L+    E   L+ L+ L + 
Sbjct: 439 DIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQ 498

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           +N +  LP  IG + +L+ L L  N L  +
Sbjct: 499 SNKILTLPRSIGNLCSLQDLRLGENNLTAI 528


>gi|395825406|ref|XP_003785926.1| PREDICTED: protein LAP2 isoform 3 [Otolemur garnettii]
          Length = 1303

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLTSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLEILPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDVSKNNIEMIEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    LTS+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSVGQLT-NIRTFAADHNYLQQL 337


>gi|332020817|gb|EGI61215.1| Leucine-rich repeat-containing protein 40 [Acromyrmex echinatior]
          Length = 607

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 194/416 (46%), Gaps = 89/416 (21%)

Query: 42  IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLH 100
           +G L ++ R+    N +   P  ISGC +L   ++ NN +S + P  L  +  L  L + 
Sbjct: 245 LGELRKVERIMFQSNNLQEFPD-ISGCSALTVLHLDNNNISEIDPQRLEVVGHLKQLTMQ 303

Query: 101 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 159
           +N ++    E  +L  L V DLS+N++S +P  IG +  L++  + GN ++ +R  ++  
Sbjct: 304 NNIIEIIPEEIIKLINLEVFDLSHNNISLIPYCIGILPNLKQFAIEGNNIKNIRGDIIRC 363

Query: 160 PTPALLKYLRSRLPENEDSEASTTKE-------DLITMATRLSVTSKELSLEGMNLSAIP 212
            TP +L ++R  +  N    +  T+E       ++I     +   ++  SL G NLS I 
Sbjct: 364 GTPRILTHIRQTVDVNT---SMNTRELLQPSVSNIIHPDKYMMKNTRLFSLAGQNLSEIS 420

Query: 213 SEIWE-AGEI--TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            EI E A E+  T +DLSRN +  LP ++S+  ++  L L+ N +   P+ I        
Sbjct: 421 EEILEDAAEVSVTTIDLSRNKLSGLPNKMSAIVTVTDLKLTSNHLASLPEWI-------- 472

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 329
                         + +K    LQILD+S N              HLQ L          
Sbjct: 473 -------------GEKYK---CLQILDISKN--------------HLQSL---------- 492

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGF------------------------KNLTSLTEL 365
           P++I  L+ LR +D+S N    +PE                          + L  L  L
Sbjct: 493 PSNIGCLKYLRDIDISFNRFTELPETIYDVEALESLIANDNQIAKIDVPLLEKLKRLAVL 552

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
           +L++NNI+ +PPELG L+ +L+ L L GN  +  R+ IL + T+ +L YL++ IP+
Sbjct: 553 NLTNNNIAHIPPELGNLK-NLRNLLLSGNCFKYPRQAILMKDTEEILSYLRNLIPQ 607



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 202/442 (45%), Gaps = 55/442 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIA-------SKNLLNGMPETIGSLSRLIRLDLHQN 56
           LD+  N LTV+ N +     +LTEL         S NLL  +P  IGSL +L  L+L  N
Sbjct: 90  LDMSCNSLTVIDNKI----ELLTELNTLNICINYSFNLLEELPPEIGSLRKLKVLNLSDN 145

Query: 57  RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-R 115
           R+ ++P        L E Y+ +N +S L AE+G L  L  +DL  N L+E  +    L R
Sbjct: 146 RLKNLPHEFYMLEELCELYLRSNQISILEAEIGDLIMLTYMDLSYNNLRELPIGMGYLVR 205

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L  L+L  N +  LPP++  M +L+ L ++ N L  +       P   L K  R     N
Sbjct: 206 LKTLNLCQNMIKELPPDVTNMRSLKTLDISFNQLEII------PPLGELRKVERIMFQSN 259

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI-PSEIWEAGEITKLDLSRNSIQEL 234
              E        I+  + L+V    L L+  N+S I P  +   G + +L +  N I+ +
Sbjct: 260 NLQEFPD-----ISGCSALTV----LHLDNNNISEIDPQRLEVVGHLKQLTMQNNIIEII 310

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK-DIPML- 292
           P E+    +L+   LS N I   P  I   L +L    ++ N ++ +  D  +   P + 
Sbjct: 311 PEEIIKLINLEVFDLSHNNISLIPYCI-GILPNLKQFAIEGNNIKNIRGDIIRCGTPRIL 369

Query: 293 ----QILDL--SYNIASLPENPPFSSLPHLQELYLRRMQ--------LREAPTDILRLQ- 337
               Q +D+  S N   L + P  S++ H  +  ++  +        L E   +IL    
Sbjct: 370 THIRQTVDVNTSMNTRELLQ-PSVSNIIHPDKYMMKNTRLFSLAGQNLSEISEEILEDAA 428

Query: 338 --QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
              +  +DLS+N L  +P     + ++T+L L+ N++++LP  +G     LQ L +  N 
Sbjct: 429 EVSVTTIDLSRNKLSGLPNKMSAIVTVTDLKLTSNHLASLPEWIGEKYKCLQILDISKNH 488

Query: 396 LRSIRRTILDRGTKAVLKYLKD 417
           L+S+   I        LKYL+D
Sbjct: 489 LQSLPSNI------GCLKYLRD 504



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 158/348 (45%), Gaps = 61/348 (17%)

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK 135
           M  N+L+ +  ++  L++L TL++        C+          + S N L  LPPEIG 
Sbjct: 92  MSCNSLTVIDNKIELLTELNTLNI--------CI----------NYSFNLLEELPPEIGS 133

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           +  L+ L L+ N L+ L              Y+   L E                     
Sbjct: 134 LRKLKVLNLSDNRLKNLPHEF----------YMLEELCE--------------------- 162

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
                L L    +S + +EI +   +T +DLS N+++ELP  +     L+TL L +N IK
Sbjct: 163 -----LYLRSNQISILEAEIGDLIMLTYMDLSYNNLRELPIGMGYLVRLKTLNLCQNMIK 217

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 315
           + P  + T++ SL  L +  N L  +P  G     + ++  + +   +L E P  S    
Sbjct: 218 ELPPDV-TNMRSLKTLDISFNQLEIIPPLG----ELRKVERIMFQSNNLQEFPDISGCSA 272

Query: 316 LQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           L  L+L    + E  P  +  +  L+ L +  N ++ IPE    L +L   DLS NNIS 
Sbjct: 273 LTVLHLDNNNISEIDPQRLEVVGHLKQLTMQNNIIEIIPEEIIKLINLEVFDLSHNNISL 332

Query: 375 LPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
           +P  +G+L P+L+   ++GN +++IR  I+  GT  +L +++  +  N
Sbjct: 333 IPYCIGIL-PNLKQFAIEGNNIKNIRGDIIRCGTPRILTHIRQTVDVN 379



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 103/177 (58%), Gaps = 4/177 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR-LDLHQNRIL 59
           ++ +D+  NKL+ L N + A  T+ T+L  + N L  +PE IG   + ++ LD+ +N + 
Sbjct: 432 VTTIDLSRNKLSGLPNKMSAIVTV-TDLKLTSNHLASLPEWIGEKYKCLQILDISKNHLQ 490

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLS 117
           S+PS+I     L +  +  N  + LP  +  +  L +L  + NQ+ +  V   +   RL+
Sbjct: 491 SLPSNIGCLKYLRDIDISFNRFTELPETIYDVEALESLIANDNQIAKIDVPLLEKLKRLA 550

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           VL+L+NN+++ +PPE+G +  LR LLL+GN  +  R +++   T  +L YLR+ +P+
Sbjct: 551 VLNLTNNNIAHIPPELGNLKNLRNLLLSGNCFKYPRQAILMKDTEEILSYLRNLIPQ 607


>gi|260788628|ref|XP_002589351.1| hypothetical protein BRAFLDRAFT_196245 [Branchiostoma floridae]
 gi|229274528|gb|EEN45362.1| hypothetical protein BRAFLDRAFT_196245 [Branchiostoma floridae]
          Length = 332

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 168/393 (42%), Gaps = 64/393 (16%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T L  L  S N L+ +PE IG L +L RL +  N + S+P +I    +L       N LS
Sbjct: 3   TDLEYLDVSNNKLSSIPEAIGRLQKLSRLAVSGNMLTSLPQAICSFPNLEVLSAHKNKLS 62

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 141
           A P  + KL +L  L +H NQL +     C L  L  L +S N LS LPP + K+  LR+
Sbjct: 63  AFPPGVEKLQELRGLFIHDNQLTDLPSGLCSLPNLDWLSVSGNKLSNLPPGVEKLQKLRR 122

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 201
           L +  N L           TP L       L       AS  K                 
Sbjct: 123 LHIADNQLTEF--------TPGLCLLHNLEL-----LGASNNK----------------- 152

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
                 LS  P  +    ++ KLD++ N + E P  + S  +L+ L +  N I+  PD +
Sbjct: 153 ------LSTFPPGVERLQKLRKLDIADNQLTEFPSGICSLLNLELLSVGNNPIRQIPDDV 206

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYL 321
            T L+ L  L +   P  + P    + +  L+IL L YN+                    
Sbjct: 207 -TRLTRLKSLSVPGCPFDEFPRQVLQ-LKTLEILVLEYNL-------------------- 244

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGL 381
               L+  P+ +  L  LR ++L  N   + PE    L ++ +L++ +NNI+ LP  L  
Sbjct: 245 ----LKTLPSTLSHLHNLREVNLRSNEFDTFPELLCELPAMEKLEIWNNNITRLPTALHR 300

Query: 382 LEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
            +  L+ L + GNPL    + +  +GT A++ +
Sbjct: 301 AD-KLKDLDVSGNPLTYPPQDVCKQGTGAIMAF 332



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 141/306 (46%), Gaps = 17/306 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S+L V GN LT L    I S+  L  L A KN L+  P  +  L  L  L +H N++  
Sbjct: 28  LSRLAVSGNMLTSLPQ-AICSFPNLEVLSAHKNKLSAFPPGVEKLQELRGLFIHDNQLTD 86

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV-EACQLRLSVL 119
           +PS +    +L    +  N LS LP  + KL KL  L +  NQL E+         L +L
Sbjct: 87  LPSGLCSLPNLDWLSVSGNKLSNLPPGVEKLQKLRRLHIADNQLTEFTPGLCLLHNLELL 146

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
             SNN LS  PP + ++  LRKL +  N L    S + +     LL    + + +  D  
Sbjct: 147 GASNNKLSTFPPGVERLQKLRKLDIADNQLTEFPSGICSLLNLELLSVGNNPIRQIPDD- 205

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                   +T  TRL    K LS+ G      P ++ +   +  L L  N ++ LP  LS
Sbjct: 206 --------VTRLTRL----KSLSVPGCPFDEFPRQVLQLKTLEILVLEYNLLKTLPSTLS 253

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+ + L  N+   +P+ +L  L ++  L++ NN + ++P+        L+ LD+S 
Sbjct: 254 HLHNLREVNLRSNEFDTFPE-LLCELPAMEKLEIWNNNITRLPT-ALHRADKLKDLDVSG 311

Query: 300 NIASLP 305
           N  + P
Sbjct: 312 NPLTYP 317



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 4/114 (3%)

Query: 265 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQELYLRR 323
           ++ L  L + NN L  +P +    +  L  L +S N+  SLP+     S P+L+ L   +
Sbjct: 2   ITDLEYLDVSNNKLSSIP-EAIGRLQKLSRLAVSGNMLTSLPQ--AICSFPNLEVLSAHK 58

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            +L   P  + +LQ+LR L +  N L  +P G  +L +L  L +S N +S LPP
Sbjct: 59  NKLSAFPPGVEKLQELRGLFIHDNQLTDLPSGLCSLPNLDWLSVSGNKLSNLPP 112


>gi|455791548|gb|EMF43355.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 371

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 162/349 (46%), Gaps = 45/349 (12%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+  L  +P+ IG L  L  L+L  N++ +I   I    +L E  +  N L+ +  E+ +
Sbjct: 56  SEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQELNLDANQLTTILKEIEQ 115

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  LD  SNQ+     E  QL+ L VL L+NN L+ LP EIG++  L+ L L  N L
Sbjct: 116 LKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQL 175

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
            TL   +      A LK L+                              EL L    L 
Sbjct: 176 ITLPKEI------AQLKNLQ------------------------------ELYLSENQLM 199

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P EI +  ++ +L+L  N +  LP E++   +LQ L LS N++   P  I   L  L 
Sbjct: 200 TLPKEIGQLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEI-GQLEKLQ 258

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
            L L+ N L  +P++    +  LQ+L LSYN   ++P    F  L +LQEL L   QL  
Sbjct: 259 KLYLNANQLTTIPNE-IAQLQNLQVLFLSYNQFKTIP--VEFGQLKNLQELNLDANQLTT 315

Query: 329 APTDILRLQQLRILDLSQNSLQSIPE--GFKNLTSLTELDLSDNNISAL 375
            P +I +LQ L+ L L  N   SI E  GF++     +  L+  + S L
Sbjct: 316 IPKEIGQLQNLQTLYLRNNQF-SIEEKKGFESFFQSAKFTLNKISFSEL 363



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 147/318 (46%), Gaps = 43/318 (13%)

Query: 81  LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 139
           L ALP ++G+L  L  L+L +NQL     E  QL+ L  L+L  N L+ +  EI ++  L
Sbjct: 60  LKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQELNLDANQLTTILKEIEQLKNL 119

Query: 140 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 199
           + L    N + TL   +  G    L                                  K
Sbjct: 120 QVLDFGSNQITTLSQEI--GQLQNL----------------------------------K 143

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
            L L    L+ +P EI +   +  L+L  N +  LP E++   +LQ L LS N++   P 
Sbjct: 144 VLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPK 203

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 318
            I   L  L  L L NN L  +P +    +  LQ L LS N + +LP+      L  LQ+
Sbjct: 204 EI-GQLEKLQELNLWNNQLITLPKE-IAQLKNLQELYLSENQLMTLPK--EIGQLEKLQK 259

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           LYL   QL   P +I +LQ L++L LS N  ++IP  F  L +L EL+L  N ++ +P E
Sbjct: 260 LYLNANQLTTIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQLTTIPKE 319

Query: 379 LGLLEPSLQALRLDGNPL 396
           +G L+ +LQ L L  N  
Sbjct: 320 IGQLQ-NLQTLYLRNNQF 336



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 145/329 (44%), Gaps = 40/329 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L+++ N+LT +    I     L EL    N L  + + I  L  L  LD   N+I +
Sbjct: 73  LQELNLDANQLTTILKE-IEQLKNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQITT 131

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +   I    +L   ++ NN L+ LP E+G+L  L TL+L +NQL     E  QL+ L  L
Sbjct: 132 LSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQEL 191

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LS N L  LP EIG++  L++L L  N L TL   +      A LK L+          
Sbjct: 192 YLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPKEI------AQLKNLQ---------- 235

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                               EL L    L  +P EI +  ++ KL L+ N +  +P E++
Sbjct: 236 --------------------ELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIA 275

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +LQ L LS N+ K  P      L +L  L LD N L  +P +    +  LQ L L  
Sbjct: 276 QLQNLQVLFLSYNQFKTIP-VEFGQLKNLQELNLDANQLTTIPKE-IGQLQNLQTLYLRN 333

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLRE 328
           N  S+ E   F S     +  L ++   E
Sbjct: 334 NQFSIEEKKGFESFFQSAKFTLNKISFSE 362


>gi|449278701|gb|EMC86492.1| Protein LAP2 [Columba livia]
          Length = 1413

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 190/410 (46%), Gaps = 62/410 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKILPKTMSR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEVVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C SLQ L+LS N ++  P+ I  SL  ++ LK+D N L  +P D    +  L+ LD S+
Sbjct: 251 GCESLQDLLLSSNSLQQLPETI-GSLKKVTTLKIDENQLIYLP-DSVGGLISLEELDCSF 308

Query: 300 N-IASLP--------------ENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQ 337
           N I +LP              ++   + LP       H+  L+L   +L   P ++  +Q
Sbjct: 309 NEIETLPSSIGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHSNKLEFLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
           +L++++LS N L+++P  F  L  LT + LSDN    L P     +P  Q
Sbjct: 369 KLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDNQSKPLIPLQKEADPDTQ 418



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 2/153 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + V+    I+    L +L+ S N L  +PETIGSL ++  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEVVEEG-ISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLIY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P S+ G  SL E     N +  LP+ +G+LS + T     N L +   E    + ++VL
Sbjct: 291 LPDSVGGLISLEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
            L +N L  LP E+G M  L+ + L+ N L+ L
Sbjct: 351 FLHSNKLEFLPEEMGDMQKLKVINLSDNRLKNL 383



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 4/160 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T +   ++   + L E     N L  +P  IG+L +L  LD+ +N I  
Sbjct: 186 LERLDLGSNEFTEVPE-VLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEV 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSV 118
           +   ISGC SL +  + +N+L  LP  +G L K+ TL +  NQL  Y  ++    + L  
Sbjct: 245 VEEGISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLI-YLPDSVGGLISLEE 303

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
           LD S N +  LP  IG+++ +R      N L  L S + N
Sbjct: 304 LDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPSEIGN 343


>gi|329663814|ref|NP_001193082.1| protein LAP2 [Bos taurus]
 gi|296475860|tpg|DAA17975.1| TPA: erbb2 interacting protein isoform 1 [Bos taurus]
          Length = 1372

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 190/401 (47%), Gaps = 64/401 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+A
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG------------- 128
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S              
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 129 ----------LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
                     LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +
Sbjct: 143 LYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFT 197

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E     E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +
Sbjct: 198 EVPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGI 249

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           S C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S
Sbjct: 250 SGCENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLVSIEELDCS 307

Query: 299 YN-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRL 336
           +N + +LP +                     P   S  ++  L+L   +L   P ++  +
Sbjct: 308 FNELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDM 367

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 368 QKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N + ++    I+    L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDISKNNIEMVEEG-ISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N L ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 24/251 (9%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 312
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRL 219

Query: 373 SALPPELGLLE 383
           + +P  +G L+
Sbjct: 220 TFIPGFIGSLK 230



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 40/257 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T +   ++   + L E     N L  +P  IGSL +L  LD+ +N I  
Sbjct: 186 LERLDLGSNEFTEVPE-VLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEM 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-- 118
           +   ISGC +L +  + +N+L  LP  +G L  + TL +  NQL  Y  ++    +S+  
Sbjct: 245 VEEGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLM-YLPDSIGGLVSIEE 303

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LD S N L  LP  IG++T +R      N                   YL+   PE    
Sbjct: 304 LDCSFNELEALPSSIGQLTNIRTFAADHN-------------------YLQQLPPE---- 340

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                    I     ++V    L L    L  +P E+ +  ++  ++LS N ++ LP   
Sbjct: 341 ---------IGSWKNITV----LFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 239 SSCASLQTLILSRNKIK 255
           +    L  + LS N+ K
Sbjct: 388 TKLQQLTAMWLSDNQSK 404


>gi|348553825|ref|XP_003462726.1| PREDICTED: protein LAP2-like isoform 6 [Cavia porcellus]
          Length = 1418

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 188/400 (47%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+A
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE SE
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFSE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLMSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   +  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388


>gi|348553821|ref|XP_003462724.1| PREDICTED: protein LAP2-like isoform 4 [Cavia porcellus]
          Length = 1370

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 188/400 (47%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+A
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE SE
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFSE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLMSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   +  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388


>gi|71991525|ref|NP_001023850.1| Protein LET-413, isoform a [Caenorhabditis elegans]
 gi|7899272|emb|CAB91651.1| LET-413 protein [Caenorhabditis elegans]
 gi|351062134|emb|CCD70053.1| Protein LET-413, isoform a [Caenorhabditis elegans]
          Length = 679

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 165/376 (43%), Gaps = 47/376 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L VL    I + T L EL  ++N +  +P+T+ +   L  L+L  N    +P 
Sbjct: 64  LDVSDNELAVLPAE-IGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPE 122

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           +I  C S+    +   +L+ LP+ +G L+ L  L+   N L+   +   +LR L  LDL 
Sbjct: 123 TICECSSITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLG 182

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS---RLPENEDSE 179
            N L  LP EIGK+T+LR+  +  N L +L  S+        L    +   RLPEN    
Sbjct: 183 QNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENLGRM 242

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            + T                +L++    +  +PS   E   +  L   RNS+  L  E+ 
Sbjct: 243 PNLT----------------DLNISINEIIELPSSFGELKRLQMLKADRNSLHNLTSEIG 286

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C SL  L L +N + D PD I   L  L+ L +D N L  +P D   +   L +L L  
Sbjct: 287 KCQSLTELYLGQNFLTDLPDTI-GDLRQLTTLNVDCNNLSDIP-DTIGNCKSLTVLSLRQ 344

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           NI                        L E P  I + + L +LD++ N L  +P   K L
Sbjct: 345 NI------------------------LTELPMTIGKCENLTVLDVASNKLPHLPFTVKVL 380

Query: 360 TSLTELDLSDNNISAL 375
             L  L LS+N   ++
Sbjct: 381 YKLQALWLSENQTQSI 396



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 163/370 (44%), Gaps = 48/370 (12%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I  +  L +L  + N +  +   + SL  L  LD+  N +  +P+ I     L E  +  
Sbjct: 32  IFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPAEIGNLTQLIELNLNR 91

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N+++ LP  +     L TL+L SN         C+   +++L L+  SL+ LP  IG +T
Sbjct: 92  NSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSLTLLPSNIGSLT 151

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            LR L    N LRT+  S+V       L+ L                             
Sbjct: 152 NLRVLEARDNLLRTIPLSIVE------LRKL----------------------------- 176

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    L A+P+EI +   + +  +  NS+  LP  +S C  L  L +S N+I   
Sbjct: 177 -EELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQIIRL 235

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS----YNIASLPENPPFSSL 313
           P+  L  + +L+ L +  N + ++PS  F ++  LQ+L       +N+ S          
Sbjct: 236 PEN-LGRMPNLTDLNISINEIIELPS-SFGELKRLQMLKADRNSLHNLTS-----EIGKC 288

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
             L ELYL +  L + P  I  L+QL  L++  N+L  IP+   N  SLT L L  N ++
Sbjct: 289 QSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILT 348

Query: 374 ALPPELGLLE 383
            LP  +G  E
Sbjct: 349 ELPMTIGKCE 358



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 172/386 (44%), Gaps = 46/386 (11%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           +D  Q+ + +IPS I                        +  KL  L+L  N +KE    
Sbjct: 18  IDRSQSNLQAIPSDIF-----------------------RFRKLEDLNLTMNNIKELDHR 54

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
              LR L +LD+S+N L+ LP EIG +T L +L L  N +  L  ++ N     LL  L 
Sbjct: 55  LFSLRHLRILDVSDNELAVLPAEIGNLTQLIELNLNRNSIAKLPDTMQNC---KLLTTLN 111

Query: 170 ------SRLPENEDSEASTT-----KEDLITMATRLSVTSKELSLEGMN--LSAIPSEIW 216
                 +RLPE     +S T     +  L  + + +   +    LE  +  L  IP  I 
Sbjct: 112 LSSNPFTRLPETICECSSITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIV 171

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           E  ++ +LDL +N ++ LP E+    SL+   +  N +   PD+I +    L  L +  N
Sbjct: 172 ELRKLEELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSI-SGCRMLDQLDVSEN 230

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            + ++P +    +P L  L++S N I  LP +  F  L  LQ L   R  L    ++I +
Sbjct: 231 QIIRLP-ENLGRMPNLTDLNISINEIIELPSS--FGELKRLQMLKADRNSLHNLTSEIGK 287

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
            Q L  L L QN L  +P+   +L  LT L++  NN+S +P  +G  + SL  L L  N 
Sbjct: 288 CQSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIPDTIGNCK-SLTVLSLRQNI 346

Query: 396 LRSIRRTILDRGTKAVLKYLKDKIPE 421
           L  +  TI       VL    +K+P 
Sbjct: 347 LTELPMTIGKCENLTVLDVASNKLPH 372



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 139/293 (47%), Gaps = 45/293 (15%)

Query: 107 YCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
           +C+  ACQ ++  +D S ++L  +P +I +   L  L LT N ++ L   L +      L
Sbjct: 5   FCLPMACQRQVDSIDRSQSNLQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFS------L 58

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
           ++LR                        L V+  EL++       +P+EI    ++ +L+
Sbjct: 59  RHLRI-----------------------LDVSDNELAV-------LPAEIGNLTQLIELN 88

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           L+RNSI +LP  + +C  L TL LS N     P+ I    SS++ L L+   L  +PS+ 
Sbjct: 89  LNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETI-CECSSITILSLNETSLTLLPSN- 146

Query: 286 FKDIPMLQILDLSYNIASLPENPPFS--SLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
              +  L++L+   N   L    P S   L  L+EL L + +L   P +I +L  LR   
Sbjct: 147 IGSLTNLRVLEARDN---LLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFY 203

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           +  NSL S+P+       L +LD+S+N I  LP  LG + P+L  L +  N +
Sbjct: 204 VDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENLGRM-PNLTDLNISINEI 255



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 144/302 (47%), Gaps = 19/302 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L++  N  T L    I   + +T L  ++  L  +P  IGSL+ L  L+   N + +
Sbjct: 107 LTTLNLSSNPFTRLPET-ICECSSITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRT 165

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSV 118
           IP SI     L E  +G N L ALPAE+GKL+ L    +  N L      +  C++ L  
Sbjct: 166 IPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRM-LDQ 224

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LD+S N +  LP  +G+M  L  L ++ N +  L SS        +LK  R+ L  N  S
Sbjct: 225 LDVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNSL-HNLTS 283

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E    +          S+T  EL L    L+ +P  I +  ++T L++  N++ ++P  +
Sbjct: 284 EIGKCQ----------SLT--ELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIPDTI 331

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
            +C SL  L L +N + + P  I     +L+ L + +N L  +P    K +  LQ L LS
Sbjct: 332 GNCKSLTVLSLRQNILTELPMTI-GKCENLTVLDVASNKLPHLPF-TVKVLYKLQALWLS 389

Query: 299 YN 300
            N
Sbjct: 390 EN 391


>gi|124003508|ref|ZP_01688357.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991077|gb|EAY30529.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 646

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 128/406 (31%), Positives = 196/406 (48%), Gaps = 28/406 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L+++ + L  L NN I     LT L   +N L  +P +IG L  L +LDL  N++  +P 
Sbjct: 205 LNLKSSGLVALPNN-IGQLKNLTILNLRENYLTKLPTSIGQLKSLEKLDLQGNQLTILPI 263

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           SI    SL +  +G N L+ LP  +G+L  L  L L  N L     +  +L+ L VL+L 
Sbjct: 264 SIGQLKSLKKLDLGANQLTTLPTSIGQLKNLQQLFLEVNTLTSLLDDIGKLKQLKVLNLR 323

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP  IG++ +LR L L+ N L  L  S         LK L       E +    
Sbjct: 324 RNRLTTLPNSIGRLKSLRWLSLSSNKLTRLPKSF------GQLKKLE------ELNLEGN 371

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
             + ++T+  +L  + K+L L   NL+ +P  I +  E+  L L RN +  LP  +    
Sbjct: 372 YFQTMLTILGQLK-SLKKLYLASNNLTTLPENIGQLPELQYLTLVRNKLDRLPESIGQLQ 430

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP-SDGFKDIPMLQILDLSYNI 301
            LQ L L RN++   P++ L  L  L  L +  NPL  +P S G               +
Sbjct: 431 ELQYLDLRRNRLSTLPES-LGQLKKLEELNIGANPLVTLPNSIGKLKNLK------KLYL 483

Query: 302 ASLPENPP-FSSLPH---LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
           A+  + P  F+S+     L+ELYL   +L   PT I +L+ L+ L+L  N +  +PE   
Sbjct: 484 ATANQTPKSFASITQITSLEELYLLVNRLDTLPTSIQKLKNLKKLNLLYNQISIVPESIG 543

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            L +L  L L +N ++ L   +G LE S+  L L  N L ++ ++I
Sbjct: 544 KLKNLQALILGNNKLTVLTQNIGQLE-SILRLDLSSNKLTTLPQSI 588



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 192/402 (47%), Gaps = 37/402 (9%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +P  IG L  L +L+L  N++ ++P+S +   +L E  +  N  + LPA + KL 
Sbjct: 47  NQLTTLPANIGELKNLKKLNLEYNQLTTLPASFAKLQNLEELNLTRNKFTTLPASVTKLQ 106

Query: 93  KLGTLDLHSN-QLKEYCVEACQLR-LSVLDLSNN-SLSGLPPEIGKMTTLRKLLLTGNPL 149
            L  L+L  N  LK+      QL+ L  L+L++N SL  LP  I ++  L+ L L G+  
Sbjct: 107 NLEELNLTDNLSLKKLPDNIEQLKNLQKLNLTSNLSLKKLPENITQLKKLKVLNLNGSSR 166

Query: 150 RTLRSSLVNGPTPALLK---YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
             L +++    +  +L    +L + LPEN             +    L V    L+L+  
Sbjct: 167 IILPANIQLPESLRILHMNDHLLTTLPEN------------FSQLHNLKV----LNLKSS 210

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            L A+P+ I +   +T L+L  N + +LP  +    SL+ L L  N++   P +I   L 
Sbjct: 211 GLVALPNNIGQLKNLTILNLRENYLTKLPTSIGQLKSLEKLDLQGNQLTILPISI-GQLK 269

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
           SL  L L  N L  +P+     +  LQ L L  N + SL ++     L  L+ L LRR +
Sbjct: 270 SLKKLDLGANQLTTLPT-SIGQLKNLQQLFLEVNTLTSLLDD--IGKLKQLKVLNLRRNR 326

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L   P  I RL+ LR L LS N L  +P+ F  L  L EL+L  N    +   LG L+ S
Sbjct: 327 LTTLPNSIGRLKSLRWLSLSSNKLTRLPKSFGQLKKLEELNLEGNYFQTMLTILGQLK-S 385

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYLK------DKIPE 421
           L+ L L  N L ++   I   G    L+YL       D++PE
Sbjct: 386 LKKLYLASNNLTTLPENI---GQLPELQYLTLVRNKLDRLPE 424



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 101/187 (54%), Gaps = 7/187 (3%)

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           +L+LE   L+ +P+ I E   + KL+L  N +  LP   +   +L+ L L+RNK    P 
Sbjct: 41  KLNLEHNQLTTLPANIGELKNLKKLNLEYNQLTTLPASFAKLQNLEELNLTRNKFTTLPA 100

Query: 260 AILTSLSSLSCLKL-DNNPLRQVPSDGFKDIPMLQILDLSYNIA--SLPENPPFSSLPHL 316
           ++ T L +L  L L DN  L+++P D  + +  LQ L+L+ N++   LPEN   + L  L
Sbjct: 101 SV-TKLQNLEELNLTDNLSLKKLP-DNIEQLKNLQKLNLTSNLSLKKLPEN--ITQLKKL 156

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           + L L        P +I   + LRIL ++ + L ++PE F  L +L  L+L  + + ALP
Sbjct: 157 KVLNLNGSSRIILPANIQLPESLRILHMNDHLLTTLPENFSQLHNLKVLNLKSSGLVALP 216

Query: 377 PELGLLE 383
             +G L+
Sbjct: 217 NNIGQLK 223



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 1/132 (0%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   T L EL    N L+ +P +I  L  L +L+L  N+I  +P SI    +L    +GN
Sbjct: 496 ITQITSLEELYLLVNRLDTLPTSIQKLKNLKKLNLLYNQISIVPESIGKLKNLQALILGN 555

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMT 137
           N L+ L   +G+L  +  LDL SN+L           +L  L+LS N+L  LP  IG++ 
Sbjct: 556 NKLTVLTQNIGQLESILRLDLSSNKLTTLPQSIGKLKKLKQLNLSYNNLKSLPEHIGQLK 615

Query: 138 TLRKLLLTGNPL 149
            L+ L L  NP+
Sbjct: 616 NLKDLNLRKNPI 627


>gi|348553823|ref|XP_003462725.1| PREDICTED: protein LAP2-like isoform 5 [Cavia porcellus]
          Length = 1407

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 188/400 (47%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+A
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE SE
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFSE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLMSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   +  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388


>gi|443691592|gb|ELT93406.1| hypothetical protein CAPTEDRAFT_215585 [Capitella teleta]
          Length = 534

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 187/417 (44%), Gaps = 44/417 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++++ + GNK   L   L      L  L  S+N L  +P+T+ +L RL  LDL  N++  
Sbjct: 78  LTEIFLYGNKFVTLPPEL-GHLANLDTLALSENSLQSLPDTLANLRRLRVLDLRHNKLCE 136

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ +    SL   ++  N +  +  ++  L  L  L L  N++KE      QL  LS  
Sbjct: 137 VPNVVYSLASLTHLFLRFNRIKVVEDDIRNLKNLTMLSLRENKIKELPSGIGQLFNLSTF 196

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+S+N L  LP E+G+   +  L L  N L  +  S+ N      L    +RL     S 
Sbjct: 197 DVSHNHLEHLPEELGQCVQMNSLDLQHNELLDIPESIGNLTLLTRLGLRYNRLNSVPRSL 256

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
           ++    D             E ++EG N+S +P  +                      LS
Sbjct: 257 SNCVNMD-------------EFNVEGNNISQLPEGL----------------------LS 281

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           S   LQ++ LSRN    +P        S   + L++N + +VP   F     L  L++  
Sbjct: 282 SLTKLQSITLSRNAFASYPVGGPAQFCSAYSINLEHNQINKVPFGIFSQASCLTKLNMKD 341

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N ++SLP +    +  ++ EL L   QL +   DI  L  L +L LS NSL+ +P    N
Sbjct: 342 NQLSSLPLD--IGTWANMVELNLGTNQLMKISEDIKDLVNLEVLTLSNNSLKRLPATIGN 399

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           L  L  LDL +N + +LP E+G L+  L  L +  N + S+ R I   G  + L+YL
Sbjct: 400 LKKLRHLDLEENKLESLPQEIGFLK-ELTKLVVQSNQITSLPRAI---GHLSNLQYL 452



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 17/219 (7%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +++E N++  +   + +  + LT+L    N L+ +P  IG+ + ++ L+L  N+++ I  
Sbjct: 313 INLEHNQINKVPFGIFSQASCLTKLNMKDNQLSSLPLDIGTWANMVELNLGTNQLMKISE 372

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    + NN+L  LPA +G L KL  LDL  N+L+    E   L+ L+ L + 
Sbjct: 373 DIKDLVNLEVLTLSNNSLKRLPATIGNLKKLRHLDLEENKLESLPQEIGFLKELTKLVVQ 432

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N ++ LP  IG ++ L+ L    N L  +         P  +  L     EN +S    
Sbjct: 433 SNQITSLPRAIGHLSNLQYLGAGENNLTNI---------PKEIGTL-----ENLESLYIN 478

Query: 183 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAG 219
              +L  +   L++ S  + +S+E   L+ IPSEI   G
Sbjct: 479 DNPNLHNLPFELALCSNLQIMSIENCPLTQIPSEIVNGG 517


>gi|260788630|ref|XP_002589352.1| hypothetical protein BRAFLDRAFT_218112 [Branchiostoma floridae]
 gi|229274529|gb|EEN45363.1| hypothetical protein BRAFLDRAFT_218112 [Branchiostoma floridae]
          Length = 340

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 158/344 (45%), Gaps = 15/344 (4%)

Query: 81  LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL 139
           L++LP  +G L K+  L +++NQLKE     C L  L VLD +NN  S  PP + K+  L
Sbjct: 2   LTSLPQAIGSLQKMTHLYIYNNQLKEVPPGVCMLSNLQVLDANNNKFSTFPPGVEKLQKL 61

Query: 140 RKLLLTGNPLRTLRSSL-------VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 192
            KL +  N L  + S L       +NG     +      LP  E       K        
Sbjct: 62  TKLYIYDNQLTEVPSGLQKLRELGINGNQLTEIPSGLCSLPNLEKFSVGNNKLSTFPPGV 121

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
                 +EL + G  L+ +PS +     +  LD+S N +   PP +     L+ L ++ N
Sbjct: 122 EKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLDVSSNKLSAFPPGVEKLQKLKELGIADN 181

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL-SYNIASLPENPPFS 311
           K+   P  +   LS+L  L  + NP+  +P D    +  L++LD+ S      P      
Sbjct: 182 KLTKLPPGVCL-LSNLERLIANRNPIAYLPDD-VTRLKRLKLLDVASCQFDEFPRQ--VL 237

Query: 312 SLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
            L  L+ELY  + + R+  P+ +  L  LR + LS N   + PE    L ++ +L + +N
Sbjct: 238 RLKTLEELYAGQPEGRKTLPSTLSHLHNLREVYLSNNKFDTFPEALCELPAMEKLYIRNN 297

Query: 371 NISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
           NI+ +P  L   +  L+ L + GNPL    + +  +GT A++ +
Sbjct: 298 NITRIPTALHRAD-KLKDLCVSGNPLTYPPQDVCKQGTGAIMAF 340



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 133/293 (45%), Gaps = 25/293 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD   NK +      +     LT+L    N L  +P     L +L  L ++ N++  IPS
Sbjct: 41  LDANNNKFSTFPPG-VEKLQKLTKLYIYDNQLTEVP---SGLQKLRELGINGNQLTEIPS 96

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            +    +L +F +GNN LS  P  + KL KL  L ++ NQL E     C L  L VLD+S
Sbjct: 97  GLCSLPNLEKFSVGNNKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLDVS 156

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N LS  PP + K+  L++L +  N L  L       P   LL  L  RL  N +  A  
Sbjct: 157 SNKLSAFPPGVEKLQKLKELGIADNKLTKL------PPGVCLLSNLE-RLIANRNPIAYL 209

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR-NSIQELPPELSSC 241
              D +T   RL    K L +        P ++     + +L   +    + LP  LS  
Sbjct: 210 P--DDVTRLKRL----KLLDVASCQFDEFPRQVLRLKTLEELYAGQPEGRKTLPSTLSHL 263

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP-----SDGFKDI 289
            +L+ + LS NK   +P+A L  L ++  L + NN + ++P     +D  KD+
Sbjct: 264 HNLREVYLSNNKFDTFPEA-LCELPAMEKLYIRNNNITRIPTALHRADKLKDL 315


>gi|410948707|ref|XP_003981072.1| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Felis catus]
          Length = 1421

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 190/401 (47%), Gaps = 64/401 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG------------- 128
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S              
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLXQ 142

Query: 129 ----------LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
                     LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +
Sbjct: 143 LYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFT 197

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E     E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +
Sbjct: 198 EVPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGI 249

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S
Sbjct: 250 SACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLASIEELDCS 307

Query: 299 YN-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRL 336
           +N + +LP +                     P   S  ++  L+L   +L   P ++  +
Sbjct: 308 FNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDM 367

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 368 QKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLASIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 146/324 (45%), Gaps = 23/324 (7%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             LR+L ++ N ++    ++ N     ++             EAS      +       +
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVV-------------EASVNPISKLPDGFSQLL 138

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
              +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+  +
Sbjct: 139 NLXQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTE 198

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSSLPH 315
            P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+  +
Sbjct: 199 VPE-VLEQLSGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDVSKNNIEMIEEG-ISACEN 254

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N + AL
Sbjct: 255 LQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLASIEELDCSFNEVEAL 314

Query: 376 PPELGLLEPSLQALRLDGNPLRSI 399
           P  +G L  +++    D N L+ +
Sbjct: 315 PSSVGQLT-NIRTFAADHNYLQQL 337


>gi|301767854|ref|XP_002919340.1| PREDICTED: protein LAP2-like isoform 1 [Ailuropoda melanoleuca]
          Length = 1420

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 190/401 (47%), Gaps = 64/401 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG------------- 128
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S              
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 129 ----------LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
                     LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +
Sbjct: 143 LYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFT 197

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E     E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +
Sbjct: 198 EVPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGI 249

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S
Sbjct: 250 SACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLVSIEELDCS 307

Query: 299 YN-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRL 336
           +N + +LP +                     P   S  ++  L+L   +L   P ++  +
Sbjct: 308 FNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDM 367

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 368 QKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDVSKNNIEMIEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NMRTFAADHNYLQQL 337


>gi|359683881|ref|ZP_09253882.1| lipoprotein [Leptospira santarosai str. 2000030832]
          Length = 440

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 178/406 (43%), Gaps = 68/406 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
             K D E NK+    N  + +   +  L    N L  +P+ IG L +L  L+L  N+  +
Sbjct: 16  FCKRDAEKNKVYRDFNEALKNAMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTA 75

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    + +N L  LP E+G+L  L  L L +N L     E   L+ L  L
Sbjct: 76  LPQEIGTLQNLQSLSLESNRLEGLPKEIGRLQNLKRLSLVNNHLTTLPKEIGMLQNLQNL 135

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL  N L  LP EIG++  L++L L  N L TL         P  +  L           
Sbjct: 136 DLIYNRLESLPKEIGQLQNLKRLYLVDNHLTTL---------PQEIWQL----------- 175

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL-DLSRNSIQELPPEL 238
                E+L T           LS+ G  L+ +P EI   G + KL DL+ + +   P E+
Sbjct: 176 -----ENLQT-----------LSISGNQLTILPKEI---GTLQKLEDLNLSGLAVFPQEI 216

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
            +  +L+ L LS N++  +P  I T L +L  L L +  L   P    K+I  LQ     
Sbjct: 217 GTLQNLKGLYLSNNRLTTFPQEIGT-LQNLKELYLSSTQLTTFP----KEIGQLQ----- 266

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
                            L+ELYL   QL     +I +LQ L++LDLS N   + P+    
Sbjct: 267 ----------------KLEELYLPSTQLVTLSQEIGQLQNLKLLDLSDNQFTTFPKEIGK 310

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
           L  L  L L  N ++ LP E+G L+  L+ L L  N L ++   I+
Sbjct: 311 LRKLEYLFLEHNRLTTLPKEIGTLQ-RLKLLNLYNNRLTTLSEEIV 355



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 185/403 (45%), Gaps = 46/403 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L +E N+LT L    I     L EL    N    +P+ IG+L  L  L L  NR+  +P 
Sbjct: 43  LYLESNQLTTLPQE-IGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSLESNRLEGLPK 101

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    + NN L+ LP E+G L  L  LDL  N+L+    E  QL+ L  L L 
Sbjct: 102 EIGRLQNLKRLSLVNNHLTTLPKEIGMLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYLV 161

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N L+ LP EI ++  L+ L ++GN L  L   +               L + ED     
Sbjct: 162 DNHLTTLPQEIWQLENLQTLSISGNQLTILPKEI-------------GTLQKLED----- 203

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                             L+L G  L+  P EI     +  L LS N +   P E+ +  
Sbjct: 204 ------------------LNLSG--LAVFPQEIGTLQNLKGLYLSNNRLTTFPQEIGTLQ 243

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +L+ L LS  ++  +P  I   L  L  L L +  L  + S     +  L++LDLS N  
Sbjct: 244 NLKELYLSSTQLTTFPKEI-GQLQKLEELYLPSTQLVTL-SQEIGQLQNLKLLDLSDNQF 301

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
            + P+      L  L+ L+L   +L   P +I  LQ+L++L+L  N L ++ E    L +
Sbjct: 302 TTFPKE--IGKLRKLEYLFLEHNRLTTLPKEIGTLQRLKLLNLYNNRLTTLSEEIVGLQN 359

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
           L  L+L +N ++ LP E+G L+ +L+ L L GNP  +  + I+
Sbjct: 360 LKNLNLRNNRLTVLPQEIGQLQ-NLKDLDLSGNPFTTFPQEIV 401



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 7/141 (4%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+ T      I     L  L    N L  +P+ IG+L RL  L+L+ NR+ ++  
Sbjct: 294 LDLSDNQFTTFPKE-IGKLRKLEYLFLEHNRLTTLPKEIGTLQRLKLLNLYNNRLTTLSE 352

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I G  +L    + NN L+ LP E+G+L  L  LDL  N    +  E   L+ L +L L 
Sbjct: 353 EIVGLQNLKNLNLRNNRLTVLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGLKHLQILRLE 412

Query: 123 NNSLSGLPPEIGKMTTLRKLL 143
           N     +P  + K  T+RKLL
Sbjct: 413 N-----IPALLSKKETIRKLL 428


>gi|386783705|gb|AFJ24747.1| SHOC2 [Schmidtea mediterranea]
          Length = 600

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 186/395 (47%), Gaps = 42/395 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L  L   KN ++ +P  IG L RL+ L+L  N+I  +P  +  C S+ +  + +N L+ L
Sbjct: 232 LKHLGLDKNSISRLPPVIGKLQRLMNLNLAFNKIDELPEELCNCASMRDLDVMHNRLTEL 291

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE-IGKMTTLRKL 142
           P  LG L  L  L++ +NQ+ +  +   +++ L    +  N +  LP + +  +  L  +
Sbjct: 292 PESLGNLQNLVRLNIRNNQITKIPISLVKVKNLKEFIMEQNCVENLPDQFLSNLGNLDNV 351

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 202
            L+ N  +T        PT    ++  +      ++        + +++  LS+    L+
Sbjct: 352 NLSRNAFKTF-------PTGGPNQFATTMSLNMSNNHIDCIPMGIFSVSKHLSI----LN 400

Query: 203 LEGMNLSA-IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
           L G  +   IP+++     + +LDLS N +  +P E+ +  +LQ L LS N IK  P  I
Sbjct: 401 LRGNEICTLIPNDVVTWTTLVELDLSSNQLSIIPTEIGALVNLQKLHLSSNHIKKLPPTI 460

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYL 321
             +L++L  L+LD+N +  +P +                           +L  + +L L
Sbjct: 461 -GNLNALVLLELDDNQIESLPDE-------------------------IGNLQSVVDLNL 494

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELG 380
              +L+  P  I +L+ L  L L++N L+ +P     ++SLTEL L +N N+  LP EL 
Sbjct: 495 TTNELKSLPASIGKLKSLMKLRLAENDLRIVPPEIGEMSSLTELHLKNNVNLDNLPEELT 554

Query: 381 LLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           L E  L  L L+   LR+I   +  +G + ++ + 
Sbjct: 555 LCE-KLMILSLENCGLRNIPEQVKSQGVRIIVYFF 588



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 181/390 (46%), Gaps = 43/390 (11%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L G P     L +L R  L QN I   P  +S C  L    + +N +  +P  L +L  L
Sbjct: 154 LEGFP----VLMQLERCYLQQNSISVFPVELSKCTGLKVLDLRSNRIEIIPECLFELQNL 209

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L L SN+++       +L+ L  L L  NS+S LPP IGK+  L  L L  N +  L 
Sbjct: 210 ELLILSSNRIESIPDSVQKLQNLKHLGLDKNSISRLPPVIGKLQRLMNLNLAFNKIDELP 269

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
             L N  +   L  + +RL E  +S  +   ++L+    RL++ + +++        IP 
Sbjct: 270 EELCNCASMRDLDVMHNRLTELPESLGNL--QNLV----RLNIRNNQIT-------KIPI 316

Query: 214 EIWEAGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
            + +   + +  + +N ++ LP + LS+  +L  + LSRN  K +P       ++   L 
Sbjct: 317 SLVKVKNLKEFIMEQNCVENLPDQFLSNLGNLDNVNLSRNAFKTFPTGGPNQFATTMSLN 376

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN----------------------PP 309
           + NN +  +P   F     L IL+L  N I +L  N                        
Sbjct: 377 MSNNHIDCIPMGIFSVSKHLSILNLRGNEICTLIPNDVVTWTTLVELDLSSNQLSIIPTE 436

Query: 310 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
             +L +LQ+L+L    +++ P  I  L  L +L+L  N ++S+P+   NL S+ +L+L+ 
Sbjct: 437 IGALVNLQKLHLSSNHIKKLPPTIGNLNALVLLELDDNQIESLPDEIGNLQSVVDLNLTT 496

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSI 399
           N + +LP  +G L+ SL  LRL  N LR +
Sbjct: 497 NELKSLPASIGKLK-SLMKLRLAENDLRIV 525



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 1/148 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S L++ GN++  L  N + +WT L EL  S N L+ +P  IG+L  L +L L  N I  
Sbjct: 396 LSILNLRGNEICTLIPNDVVTWTTLVELDLSSNQLSIIPTEIGALVNLQKLHLSSNHIKK 455

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P +I    +L    + +N + +LP E+G L  +  L+L +N+LK       +L+ L  L
Sbjct: 456 LPPTIGNLNALVLLELDDNQIESLPDEIGNLQSVVDLNLTTNELKSLPASIGKLKSLMKL 515

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGN 147
            L+ N L  +PPEIG+M++L +L L  N
Sbjct: 516 RLAENDLRIVPPEIGEMSSLTELHLKNN 543


>gi|24215664|ref|NP_713145.1| hypothetical protein LA_2964 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074856|ref|YP_005989174.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196829|gb|AAN50163.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458646|gb|AER03191.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 426

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 151/317 (47%), Gaps = 18/317 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  SKN L  +PE IG L  L +L L++N++ +IP  I    +L E  + +
Sbjct: 91  IGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAH 150

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP ++ +L +L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++ 
Sbjct: 151 NQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLR 210

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR----LPENEDSEASTTKEDLITMATR 193
            L  L L  N L  L   +       +L +LR+     LP+      +  K  L      
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQIL-HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLT 269

Query: 194 LSVTS-------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
                       ++L L    L+ +P EI +   + +LDL  N +  LP  +     LQT
Sbjct: 270 TLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQT 329

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           L L  N++   P+ +   L +L  L L++N L  +P +    +  LQ L+L YN +A+LP
Sbjct: 330 LYLGNNQLNFLPNKV-EQLQNLESLDLEHNQLNALPKE-IGKLQKLQTLNLKYNQLATLP 387

Query: 306 ENPPFSSLPHLQELYLR 322
           E      L +L++LYL 
Sbjct: 388 E--EIKQLKNLKKLYLH 402



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 184/423 (43%), Gaps = 74/423 (17%)

Query: 10  KLTVLSNNLIASWTMLTELIA----------SKNLLNGMPETIGSLSRLIRLDLHQNRIL 59
           KL   SN +   +  +TE++           S + L  +P  IG L  L  L+L  N+++
Sbjct: 26  KLQAQSNEVQTYYRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLI 85

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 118
           ++P  I    +L + ++  N L ALP E+G+L  L  L L+ NQL     E  QL+ L  
Sbjct: 86  ALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQE 145

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           L+L++N L+ LP +I ++  L+ L L  N   ++   +        L+ L S        
Sbjct: 146 LNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEI------GQLQNLES-------- 191

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                                 L L+   L+ +P EI +   +  L L  N +  LP E+
Sbjct: 192 ----------------------LGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEI 229

Query: 239 SSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDNN 276
               +LQ L L  N++   P  I                      +  L +L  LKL  N
Sbjct: 230 GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYEN 289

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            L  +P +    +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P  + +
Sbjct: 290 QLTTLPKE-IGQLQNLQELDLDGNQLTTLPEN--IGQLQRLQTLYLGNNQLNFLPNKVEQ 346

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           LQ L  LDL  N L ++P+    L  L  L+L  N ++ LP E+  L+ +L+ L L  NP
Sbjct: 347 LQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK-NLKKLYLHNNP 405

Query: 396 LRS 398
           L S
Sbjct: 406 LPS 408



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 1/102 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD++GN+LT L  N I     L  L    N LN +P  +  L  L  LDL  N++ +
Sbjct: 304 LQELDLDGNQLTTLPEN-IGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNA 362

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 102
           +P  I     L    +  N L+ LP E+ +L  L  L LH+N
Sbjct: 363 LPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404


>gi|360042765|emb|CCD78175.1| putative shoc2 [Schistosoma mansoni]
          Length = 542

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 183/386 (47%), Gaps = 30/386 (7%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLL--NGMPETIGSLSRLIRLDLHQNRILS-IPSS 64
           GNKLT L ++ I+  T L  L+  +N L  +G+P  I  L+ L +LDL  NR+   +P+ 
Sbjct: 139 GNKLTTLPSS-ISHLTNLKRLLLQQNWLTASGIPNEITKLTNLEQLDLRYNRLDGPLPTC 197

Query: 65  ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLS 122
           I G  +L    +  N L+ +  E+  L +L  L +  N +++    +     +L  LDLS
Sbjct: 198 ICGLYNLEHLLLTYNKLTHIVDEIKYLKRLSVLVVSRNLIRQDLPSSIGELTKLVKLDLS 257

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N ++ LP  IGK T+LR L L  N L  L  S+ N      L    ++L E   S A+ 
Sbjct: 258 FNHITFLPDSIGKCTSLRDLNLQHNQLTKLPDSIGNLVNLCRLSIKYNQLVEIPASLANC 317

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPP----E 237
            K D             E ++E   LS++P+ +      +  + LSRN     P     +
Sbjct: 318 VKLD-------------EFNVENNQLSSLPNNLLPCLHNLLNITLSRNYFTNFPSGDPQQ 364

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
              C    T+ +  N+I + P ++ +  S+L  L L +N L  +      ++  L  LDL
Sbjct: 365 FQMCY---TINMDHNEITNIPKSVFSLASNLIKLNLRDNALDSLIGPDLHELKTLVELDL 421

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
             N ++ LP     + L  L+ L L   QL   P +I +L +LRILDL  N L+S+P   
Sbjct: 422 GSNRLSELPTE--INKLVALEVLRLNYNQLTSLPDEITQLSKLRILDLESNLLESLPNDL 479

Query: 357 KNLTSLTELDLSDNNISALPPELGLL 382
             LTSL EL++  N +   P  +G L
Sbjct: 480 SGLTSLQELNVLCNRLKTFPASIGQL 505



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 173/366 (47%), Gaps = 42/366 (11%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLL-NGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           NKLT + +  I     L+ L+ S+NL+   +P +IG L++L++LDL  N I  +P SI  
Sbjct: 212 NKLTHIVDE-IKYLKRLSVLVVSRNLIRQDLPSSIGELTKLVKLDLSFNHITFLPDSIGK 270

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSL 126
           C SL +  + +N L+ LP  +G L  L  L +  NQL E     A  ++L   ++ NN L
Sbjct: 271 CTSLRDLNLQHNQLTKLPDSIGNLVNLCRLSIKYNQLVEIPASLANCVKLDEFNVENNQL 330

Query: 127 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 186
           S LP  +  +  L  LL     +   R+   N P+    ++        + +E +   + 
Sbjct: 331 SSLPNNL--LPCLHNLL----NITLSRNYFTNFPSGDPQQFQMCYTINMDHNEITNIPKS 384

Query: 187 LITMATRLSVTSKELSLEGMNL-SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 245
           + ++A+ L     +L+L    L S I  ++ E   + +LDL  N + ELP E++   +L+
Sbjct: 385 VFSLASNLI----KLNLRDNALDSLIGPDLHELKTLVELDLGSNRLSELPTEINKLVALE 440

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 305
            L L+ N++   PD I T LS L  L L++N L  +P+D                     
Sbjct: 441 VLRLNYNQLTSLPDEI-TQLSKLRILDLESNLLESLPND--------------------- 478

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE--GFKNLTSLT 363
                S L  LQEL +   +L+  P  I +L +L+++   +N +  IP    F +L    
Sbjct: 479 ----LSGLTSLQELNVLCNRLKTFPASIGQLTKLKVIMAGENDITDIPVEIDFASLKKKK 534

Query: 364 ELDLSD 369
           E  ++D
Sbjct: 535 EHHIAD 540



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 1/110 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+L+ L    I     L  L  + N L  +P+ I  LS+L  LDL  N + S
Sbjct: 416 LVELDLGSNRLSELPTE-INKLVALEVLRLNYNQLTSLPDEITQLSKLRILDLESNLLES 474

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           +P+ +SG  SL E  +  N L   PA +G+L+KL  +    N + +  VE
Sbjct: 475 LPNDLSGLTSLQELNVLCNRLKTFPASIGQLTKLKVIMAGENDITDIPVE 524


>gi|348553815|ref|XP_003462721.1| PREDICTED: protein LAP2-like isoform 1 [Cavia porcellus]
          Length = 1455

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 189/400 (47%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+A
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE SE
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFSE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLMSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   +  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388


>gi|417785509|ref|ZP_12433213.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409951374|gb|EKO05889.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 426

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 151/317 (47%), Gaps = 18/317 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  SKN L  +PE IG L  L +L L++N++ +IP  I    +L E  + +
Sbjct: 91  IGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGKLQNLQELNLAH 150

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP ++ +L +L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++ 
Sbjct: 151 NQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLR 210

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR----LPENEDSEASTTKEDLITMATR 193
            L  L L  N L  L   +       +L +LR+     LP+      +  K  L      
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQIL-HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLT 269

Query: 194 LSVTS-------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
                       ++L L    L+ +P EI +   + +LDL  N +  LP  +     LQT
Sbjct: 270 TLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQT 329

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           L L  N++   P+ +   L +L  L L++N L  +P +    +  LQ L+L YN +A+LP
Sbjct: 330 LYLGNNQLNFLPNKV-EQLQNLESLDLEHNQLNALPKE-IGKLQKLQTLNLKYNQLATLP 387

Query: 306 ENPPFSSLPHLQELYLR 322
           E      L +L++LYL 
Sbjct: 388 E--EIKQLKNLKKLYLH 402



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 158/364 (43%), Gaps = 64/364 (17%)

Query: 59  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 117
           +++P  I    +L + ++  N L ALP E+G+L  L  L L+ NQL     E  +L+ L 
Sbjct: 85  IALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGKLQNLQ 144

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            L+L++N L+ LP +I ++  L+ L L  N   ++   +        L+ L S       
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEI------GQLQNLES------- 191

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                                  L L+   L+ +P EI +   +  L L  N +  LP E
Sbjct: 192 -----------------------LGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 228

Query: 238 LSSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDN 275
           +    +LQ L L  N++   P  I                      +  L +L  LKL  
Sbjct: 229 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE 288

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N L  +P +    +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P  + 
Sbjct: 289 NQLTTLPKE-IGQLQNLQELDLDGNQLTTLPEN--IGQLQRLQTLYLGNNQLNFLPNKVE 345

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           +LQ L  LDL  N L ++P+    L  L  L+L  N ++ LP E+  L+ +L+ L L  N
Sbjct: 346 QLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK-NLKKLYLHNN 404

Query: 395 PLRS 398
           PL S
Sbjct: 405 PLPS 408



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 147/345 (42%), Gaps = 64/345 (18%)

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 141
           ALP E+GKL  L  L L  NQL     E  QL+ L  L L  N L+ +P EIGK+  L++
Sbjct: 86  ALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGKLQNLQE 145

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 201
           L L  N L TL                    PE+            I    RL      L
Sbjct: 146 LNLAHNQLATL--------------------PED------------IEQLQRLQT----L 169

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
            L     ++I  EI +   +  L L  N +  LP E+    +L++L L  N++   P  I
Sbjct: 170 YLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEI 229

Query: 262 LTSLSSLSCLKLDNNPLRQVPSD----------------------GFKDIPMLQILDLSY 299
              L +L  L L NN L  +P +                          +  LQ L L  
Sbjct: 230 -GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE 288

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N + +LP+      L +LQEL L   QL   P +I +LQ+L+ L L  N L  +P   + 
Sbjct: 289 NQLTTLPK--EIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFLPNKVEQ 346

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L +L  LDL  N ++ALP E+G L+  LQ L L  N L ++   I
Sbjct: 347 LQNLESLDLEHNQLNALPKEIGKLQ-KLQTLNLKYNQLATLPEEI 390



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 46/149 (30%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD++GN+LT L                        PE IG L RL  L L  N++  
Sbjct: 304 LQELDLDGNQLTTL------------------------PENIGQLQRLQTLYLGNNQLNF 339

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P+ +    +L    + +N L+ALP E+GKL KL TL+L  NQ                 
Sbjct: 340 LPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQ----------------- 382

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
                L+ LP EI ++  L+KL L  NPL
Sbjct: 383 -----LATLPEEIKQLKNLKKLYLHNNPL 406


>gi|354474057|ref|XP_003499248.1| PREDICTED: protein LAP2 [Cricetulus griseus]
          Length = 1448

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ  +LS N ++  PD I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDFLLSSNSLQQLPDTI-GSLKNVTTLKIDENQLMYLP-DSIGGLRSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   +  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSVGQLTNIRTFAADHNFLQQLPPEIGNWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 117/250 (46%), Gaps = 24/250 (9%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 312
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRL 219

Query: 373 SALPPELGLL 382
           + +P  +G L
Sbjct: 220 TFIPGFIGSL 229



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L + + S N L  +P+TIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDFLLSSNSLQQLPDTIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLRSIEELDCSFNEIEALPSSVGQLTNIRTFAADHNFLQQLPPEIGNWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 151/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDGNRLTFIP--GFIGSLRQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+  L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N I
Sbjct: 252 CENLQDFLLSSNSLQQLPDTIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEI 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSVGQLT-NIRTFAADHNFLQQL 337



 Score = 42.4 bits (98), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 1/105 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD   N++  L ++ +   T +    A  N L  +P  IG+   +  L LH N++ +
Sbjct: 301 IEELDCSFNEIEALPSS-VGQLTNIRTFAADHNFLQQLPPEIGNWKNITVLFLHSNKLET 359

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 105
           +P  +     L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 360 LPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 404


>gi|194380802|dbj|BAG58554.1| unnamed protein product [Homo sapiens]
          Length = 610

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 185/393 (47%), Gaps = 62/393 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTM-----NRLTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
           +L++++LS N L+++P  F  L  LT + LSDN
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 163/352 (46%), Gaps = 26/352 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N LT L  + IA+   L EL  SKN +   PE I +   L  ++   N I  
Sbjct: 71  LHKLSLPDNDLTTLPAS-IANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P   S   +L + Y+ +  L  LPA  G+L+KL  L+L  NQLK       +L +L  L
Sbjct: 130 LPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERL 189

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL--LKYLRSRLPENED 177
           DL +N  + +P  + +++ L++  +  N     R + + G   +L  L YL         
Sbjct: 190 DLGSNEFTEVPEVLEQLSGLKEFWMDAN-----RLTFIPGFIGSLKQLTYL--------- 235

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
            + S    +++          ++L L   +L  +P  I     IT L +  N +  LP  
Sbjct: 236 -DVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDS 294

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQIL 295
           +    S++ L  S N+++  P +I   L++L     D+N L+Q+P +   +K+I +L + 
Sbjct: 295 IGGLISVEELDCSFNEVEALPSSI-GQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLH 353

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
             S  + +LPE      +  L+ + L   +L+  P    +LQQL  + LS N
Sbjct: 354 --SNKLETLPEE--MGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 119/274 (43%), Gaps = 42/274 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T +   ++   + L E     N L  +P  IGSL +L  LD+ +N I  
Sbjct: 186 LERLDLGSNEFTEVPE-VLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEM 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-- 118
           +   IS C +L +  + +N+L  LP  +G L  + TL +  NQL  Y  ++    +SV  
Sbjct: 245 VEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLM-YLPDSIGGLISVEE 303

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LD S N +  LP  IG++T LR      N                   YL+   PE    
Sbjct: 304 LDCSFNEVEALPSSIGQLTNLRTFAADHN-------------------YLQQLPPE---- 340

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                    I     ++V    L L    L  +P E+ +  ++  ++LS N ++ LP   
Sbjct: 341 ---------IGSWKNITV----LFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 239 SSCASLQTLILSRNK--IKDWPDAILTSLSSLSC 270
           +    L  + LS N+  +    ++  T++SS  C
Sbjct: 388 TKLQQLTAMWLSDNQSMLSRSFNSNFTTVSSFHC 421



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 2/85 (2%)

Query: 294 ILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           +  L Y+  SL + P   F+    L+ELYL   Q+ E P  +   Q L  L L  N L +
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 352 IPEGFKNLTSLTELDLSDNNISALP 376
           +P    NL +L ELD+S N I   P
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFP 108


>gi|260788668|ref|XP_002589371.1| hypothetical protein BRAFLDRAFT_218147 [Branchiostoma floridae]
 gi|229274548|gb|EEN45382.1| hypothetical protein BRAFLDRAFT_218147 [Branchiostoma floridae]
          Length = 310

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 150/307 (48%), Gaps = 25/307 (8%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +PE +  ++ L  +++  N++ SIP +I     L+    G N L++LP  +G L KL
Sbjct: 24  LTSIPEEVFDITDLESINVSHNKLTSIPEAIGRLQKLSRLDAGGNKLTSLPQAIGTLPKL 83

Query: 95  GTLDLHSNQLKEYCVEAC-QLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L ++ N+L +     C  L L VL   NN+LS  PP + K+  LR+L +  N L  + 
Sbjct: 84  THLYVYDNKLTKLPTGVCLLLNLEVLSAFNNNLSTFPPGVEKLQKLRELYVYDNQLTEVP 143

Query: 154 SSLVNGPTPALLKYLRS---RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
             + + P   +L   R+   RLP++            +T  TRL    K+L++    L++
Sbjct: 144 PGVCSLPNLEVLSVGRNPIRRLPDD------------VTRLTRL----KDLNVSDNKLTS 187

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           IP  I    ++ +LD   N +  LP E+ S   L  L +  NK+ + P  I   L  L  
Sbjct: 188 IPEAIGRLQKLYRLDAHGNMLTSLPQEIGSLQKLTHLYVHSNKLANLPPGI-EKLQKLRQ 246

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 329
           L +  N L +VPS G   +P L++L +  N +++ P  P    L  L+ELY+   QL E 
Sbjct: 247 LYICGNQLTEVPS-GVCSLPNLEVLHVGNNKLSTFP--PGVEKLQKLRELYIYGNQLTEV 303

Query: 330 PTDILRL 336
           P+ +  L
Sbjct: 304 PSGVCSL 310



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 152/357 (42%), Gaps = 64/357 (17%)

Query: 44  SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 103
           ++  L+ L+L    + SIP  +     L    + +N L+++P  +G+L KL         
Sbjct: 10  TVDGLLYLNLSNQGLTSIPEEVFDITDLESINVSHNKLTSIPEAIGRLQKL--------- 60

Query: 104 LKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 163
                        S LD   N L+ LP  IG +  L  L +  N L              
Sbjct: 61  -------------SRLDAGGNKLTSLPQAIGTLPKLTHLYVYDNKL-------------- 93

Query: 164 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 223
                 ++LP              + +   L V    LS    NLS  P  + +  ++ +
Sbjct: 94  ------TKLPTG------------VCLLLNLEV----LSAFNNNLSTFPPGVEKLQKLRE 131

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           L +  N + E+PP + S  +L+ L + RN I+  PD + T L+ L  L + +N L  +P 
Sbjct: 132 LYVYDNQLTEVPPGVCSLPNLEVLSVGRNPIRRLPDDV-TRLTRLKDLNVSDNKLTSIP- 189

Query: 284 DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 342
           +    +  L  LD   N + SLP+     SL  L  LY+   +L   P  I +LQ+LR L
Sbjct: 190 EAIGRLQKLYRLDAHGNMLTSLPQE--IGSLQKLTHLYVHSNKLANLPPGIEKLQKLRQL 247

Query: 343 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            +  N L  +P G  +L +L  L + +N +S  PP +  L+  L+ L + GN L  +
Sbjct: 248 YICGNQLTEVPSGVCSLPNLEVLHVGNNKLSTFPPGVEKLQ-KLRELYIYGNQLTEV 303



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 72/139 (51%), Gaps = 1/139 (0%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +   T L +L  S N L  +PE IG L +L RLD H N + S+P  I     L   Y+ +
Sbjct: 169 VTRLTRLKDLNVSDNKLTSIPEAIGRLQKLYRLDAHGNMLTSLPQEIGSLQKLTHLYVHS 228

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP  + KL KL  L +  NQL E     C L  L VL + NN LS  PP + K+ 
Sbjct: 229 NKLANLPPGIEKLQKLRQLYICGNQLTEVPSGVCSLPNLEVLHVGNNKLSTFPPGVEKLQ 288

Query: 138 TLRKLLLTGNPLRTLRSSL 156
            LR+L + GN L  + S +
Sbjct: 289 KLRELYIYGNQLTEVPSGV 307



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 1/114 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD  GN LT L    I S   LT L    N L  +P  I  L +L +L +  N++  
Sbjct: 198 LYRLDAHGNMLTSLPQE-IGSLQKLTHLYVHSNKLANLPPGIEKLQKLRQLYICGNQLTE 256

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 114
           +PS +    +L   ++GNN LS  P  + KL KL  L ++ NQL E     C L
Sbjct: 257 VPSGVCSLPNLEVLHVGNNKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSL 310


>gi|417765447|ref|ZP_12413409.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352384|gb|EJP04580.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 426

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 151/317 (47%), Gaps = 18/317 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  SKN L  +PE IG L  L +L L++N++ +IP  I    +L E  + +
Sbjct: 91  IGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAH 150

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP ++ +L +L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++ 
Sbjct: 151 NQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLR 210

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR----LPENEDSEASTTKEDLITMATR 193
            L  L L  N L  L   +       +L +LR+     LP+      +  K  L      
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQIL-HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLT 269

Query: 194 LSVTS-------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
                       ++L L    L+ +P EI +   + +LDL  N +  LP  +     LQT
Sbjct: 270 TLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQT 329

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           L L  N++   P+ +   L +L  L L++N L  +P +    +  LQ L+L YN +A+LP
Sbjct: 330 LYLGNNQLNFLPNKV-EQLQNLESLDLEHNQLNALPKE-IGKLQKLQTLNLKYNQLATLP 387

Query: 306 ENPPFSSLPHLQELYLR 322
           E      L +L++LYL 
Sbjct: 388 E--EIKQLKNLKKLYLH 402



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 158/364 (43%), Gaps = 64/364 (17%)

Query: 59  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 117
           +++P  I    +L + ++  N L ALP E+G+L  L  L L+ NQL     E  QL+ L 
Sbjct: 85  IALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQ 144

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            L+L++N L+ LP +I ++  L+ L L  N   ++   +        L+ L S       
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEI------GQLQNLES------- 191

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                                  L L+   L+ +P EI +   +  L L  N +  LP E
Sbjct: 192 -----------------------LGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 228

Query: 238 LSSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDN 275
           +    +LQ L L  N++   P  I                      +  L +L  LKL  
Sbjct: 229 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE 288

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N L  +P +    +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P  + 
Sbjct: 289 NQLTTLPKE-IGQLQNLQELDLDGNQLTTLPEN--IGQLQRLQTLYLGNNQLNFLPNKVE 345

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           +LQ L  LDL  N L ++P+    L  L  L+L  N ++ LP E+  L+ +L+ L L  N
Sbjct: 346 QLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK-NLKKLYLHNN 404

Query: 395 PLRS 398
           PL S
Sbjct: 405 PLPS 408



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 1/132 (0%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L   +N L  +P+ IG L  L  LDL  N++ ++P +I     L   Y+GN
Sbjct: 275 IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGN 334

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP ++ +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++ 
Sbjct: 335 NQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK 394

Query: 138 TLRKLLLTGNPL 149
            L+KL L  NPL
Sbjct: 395 NLKKLYLHNNPL 406


>gi|449514350|ref|XP_004177207.1| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Taeniopygia guttata]
          Length = 1452

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 191/410 (46%), Gaps = 62/410 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKILPKTMSR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEVVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C SLQ L+LS N ++  P++I  SL  ++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 GCESLQDLLLSSNSLQQLPESI-GSLKKVTTLKIDENQLIYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLP--------------ENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQ 337
           N I +LP              ++   + LP       H+  L+L   +L   P ++  +Q
Sbjct: 309 NEIETLPSSVGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHSNKLEFLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
           +L++++LS N L+++P  F  L  LT + LSDN    L P     +P  Q
Sbjct: 369 KLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDNQSKPLIPLQKEADPDTQ 418



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 2/153 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + V+    I+    L +L+ S N L  +PE+IGSL ++  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEVVEEG-ISGCESLQDLLLSSNSLQQLPESIGSLKKVTTLKIDENQLIY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N +  LP+ +G+LS + T     N L +   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEIETLPSSVGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
            L +N L  LP E+G M  L+ + L+ N L+ L
Sbjct: 351 FLHSNKLEFLPEEMGDMQKLKVINLSDNRLKNL 383



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 4/160 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T +   ++   + L E     N L  +P  IG+L +L  LD+ +N I  
Sbjct: 186 LERLDLGSNEFTEVPE-VLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEV 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-- 118
           +   ISGC SL +  + +N+L  LP  +G L K+ TL +  NQL  Y  ++    +SV  
Sbjct: 245 VEEGISGCESLQDLLLSSNSLQQLPESIGSLKKVTTLKIDENQLI-YLPDSIGGLISVEE 303

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
           LD S N +  LP  +G+++ +R      N L  L S + N
Sbjct: 304 LDCSFNEIETLPSSVGQLSNIRTFAADHNFLTQLPSEIGN 343


>gi|418678095|ref|ZP_13239369.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418684289|ref|ZP_13245475.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|418741009|ref|ZP_13297385.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|400321285|gb|EJO69145.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410741181|gb|EKQ85893.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410751604|gb|EKR08581.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 354

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 146/298 (48%), Gaps = 28/298 (9%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV---NGPTPALLKYLRSRL 172
           + VLDLS  +L+  P EIG+   L+KL L+GN L  L   +V   N    +L     + L
Sbjct: 43  VRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKEL----SLEGMNLS-----AIPSEIWEAGEITK 223
           P+  +   S    DL     +L    KE+    +LE +NLS     A+P EI +   +  
Sbjct: 103 PKEIEQLKSLKNLDL--FRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQI 160

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           L L  N I  LP E+     L+ LIL  N+ K+ P   L  L +L  L L  N L  +P 
Sbjct: 161 LKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEAL-QLKNLQKLNLSENQLVSIP- 218

Query: 284 DGFKDIPMLQ-----ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
              K+I  LQ     +LD +  I  LP       L +LQELYL   Q    P +I +L+ 
Sbjct: 219 ---KEILQLQNLRDLVLDRNQ-ITILP--TEVLQLQNLQELYLSENQFTSLPKEIDKLKN 272

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           LR L L  N L ++P+    L +L  L+L +N ++ LP E+G L+ +LQ L LD NP 
Sbjct: 273 LRWLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQLK-NLQRLELDSNPF 329



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 143/306 (46%), Gaps = 44/306 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+ GN+LTVLS   I     L EL    N L  +P+ I  L  L  LDL +N++++
Sbjct: 66  LQKLDLSGNELTVLSKE-IVQLQNLQELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLMT 124

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL----KEYCVEACQLRL 116
           +P  +    +L +  +  N L+A+P E+G+L  L  L L  NQ+    KE  +E  Q  L
Sbjct: 125 VPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVSLPKE--IEGLQ-EL 181

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL-LKYLRSRLPEN 175
             L L NN    +P E  ++  L+KL L+ N        LV+ P   L L+ LR      
Sbjct: 182 KELILENNRFKNVPGEALQLKNLQKLNLSEN-------QLVSIPKEILQLQNLR------ 228

Query: 176 EDSEASTTKEDLITMATRLSV---------TSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                     DL+    ++++           +EL L     +++P EI +   +  L L
Sbjct: 229 ----------DLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSL 278

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
             N +  LP E+    +LQ L L  N++ + P  I   L +L  L+LD+NP    P +  
Sbjct: 279 KNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEI-GQLKNLQRLELDSNPFS--PKEKE 335

Query: 287 KDIPML 292
           K + +L
Sbjct: 336 KVVKLL 341



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 140/315 (44%), Gaps = 42/315 (13%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L   P+ IG    L +LDL  N +  +   I    +L E  + +N L+ LP E+ +L  L
Sbjct: 53  LTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNLPKEIEQLKSL 112

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDL  NQL     E   L+ L  L+LS N L+ +P EIG++  L+ L L  N + +L 
Sbjct: 113 KNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVSL- 171

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
                   P  ++ L+                             KEL LE      +P 
Sbjct: 172 --------PKEIEGLQEL---------------------------KELILENNRFKNVPG 196

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           E  +   + KL+LS N +  +P E+    +L+ L+L RN+I   P  +L  L +L  L L
Sbjct: 197 EALQLKNLQKLNLSENQLVSIPKEILQLQNLRDLVLDRNQITILPTEVL-QLQNLQELYL 255

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
             N    +P +    +  L+ L L  N + +LP+      L +LQ L L   QL   P +
Sbjct: 256 SENQFTSLPKE-IDKLKNLRWLSLKNNRLTTLPK--EIGQLKNLQRLELGNNQLTNLPKE 312

Query: 333 ILRLQQLRILDLSQN 347
           I +L+ L+ L+L  N
Sbjct: 313 IGQLKNLQRLELDSN 327



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 115/239 (48%), Gaps = 27/239 (11%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A + S   + L L   NL++ P EI +   + KLDLS N +  L  E+    +LQ L
Sbjct: 33  LTKALQNSSNVRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQEL 92

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-------------------KD 288
            L  NK+ + P  I   L SL  L L  N L  VP +                     K+
Sbjct: 93  SLHSNKLTNLPKEI-EQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKE 151

Query: 289 IPM---LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
           I     LQIL L +N I SLP+      L  L+EL L   + +  P + L+L+ L+ L+L
Sbjct: 152 IGQLKNLQILKLDHNQIVSLPK--EIEGLQELKELILENNRFKNVPGEALQLKNLQKLNL 209

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           S+N L SIP+    L +L +L L  N I+ LP E+  L+ +LQ L L  N   S+ + I
Sbjct: 210 SENQLVSIPKEILQLQNLRDLVLDRNQITILPTEVLQLQ-NLQELYLSENQFTSLPKEI 267


>gi|440908498|gb|ELR58508.1| Protein LAP2 [Bos grunniens mutus]
          Length = 1412

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 190/401 (47%), Gaps = 64/401 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+A
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG------------- 128
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S              
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 129 ----------LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
                     LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +
Sbjct: 143 LYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFT 197

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E     E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +
Sbjct: 198 EVPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGI 249

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           S C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S
Sbjct: 250 SGCENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLVSIEELDCS 307

Query: 299 YN-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRL 336
           +N + +LP +                     P   S  ++  L+L   +L   P ++  +
Sbjct: 308 FNELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDM 367

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 368 QKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N + ++    I+    L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDISKNNIEMVEEG-ISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N L ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 24/251 (9%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 312
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRL 219

Query: 373 SALPPELGLLE 383
           + +P  +G L+
Sbjct: 220 TFIPGFIGSLK 230



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 40/257 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T +   ++   + L E     N L  +P  IGSL +L  LD+ +N I  
Sbjct: 186 LERLDLGSNEFTEVPE-VLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEM 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-- 118
           +   ISGC +L +  + +N+L  LP  +G L  + TL +  NQL  Y  ++    +S+  
Sbjct: 245 VEEGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLM-YLPDSIGGLVSIEE 303

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LD S N L  LP  IG++T +R      N                   YL+   PE    
Sbjct: 304 LDCSFNELEALPSSIGQLTNIRTFAADHN-------------------YLQQLPPE---- 340

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                    I     ++V    L L    L  +P E+ +  ++  ++LS N ++ LP   
Sbjct: 341 ---------IGSWKNITV----LFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 239 SSCASLQTLILSRNKIK 255
           +    L  + LS N+ K
Sbjct: 388 TKLQQLTAMWLSDNQSK 404


>gi|334325168|ref|XP_001366860.2| PREDICTED: protein LAP2 isoform 1 [Monodelphis domestica]
          Length = 1448

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 189/414 (45%), Gaps = 62/414 (14%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I  +   +S
Sbjct: 199 VPEVLEQLNGL--------KEFWMDGNRLTFIPGLIGSLKQLTYLDVSKNNIDTVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C SLQ L+LS N ++  P++I   L  L+ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 GCESLQDLLLSSNSLQQLPESI-GLLKKLTTLKIDENQLMYLP-DSIGGLISIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P      H+  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSIGQLSNIRTFAADHNYLQQLPPEIGFWKHVTVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           +L++++LS N ++++P  F  L  LT + LSDN    L P     +P  Q + L
Sbjct: 369 KLKVINLSDNRMKNLPFSFTKLQQLTAMWLSDNQSKPLIPLQKETDPETQKMVL 422



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 40/257 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T +   ++     L E     N L  +P  IGSL +L  LD+ +N I +
Sbjct: 186 LERLDLGSNEFTEVPE-VLEQLNGLKEFWMDGNRLTFIPGLIGSLKQLTYLDVSKNNIDT 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-- 118
           +   ISGC SL +  + +N+L  LP  +G L KL TL +  NQL  Y  ++    +S+  
Sbjct: 245 VEEGISGCESLQDLLLSSNSLQQLPESIGLLKKLTTLKIDENQLM-YLPDSIGGLISIEE 303

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LD S N +  LP  IG+++ +R      N                   YL+   PE    
Sbjct: 304 LDCSFNEIEALPSSIGQLSNIRTFAADHN-------------------YLQQLPPE---- 340

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                    I     ++V    L L    L  +P E+ +  ++  ++LS N ++ LP   
Sbjct: 341 ---------IGFWKHVTV----LFLHSNKLETLPEEMGDMQKLKVINLSDNRMKNLPFSF 387

Query: 239 SSCASLQTLILSRNKIK 255
           +    L  + LS N+ K
Sbjct: 388 TKLQQLTAMWLSDNQSK 404


>gi|317491382|ref|ZP_07949818.1| leucine Rich repeat protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920929|gb|EFV42252.1| leucine Rich repeat protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 297

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 151/337 (44%), Gaps = 68/337 (20%)

Query: 46  SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 105
           +R + LD   N+ L     I    SL    + NN LS+ P ++G LS+L  L++  NQ+ 
Sbjct: 16  TRFLNLD---NQQLECLDGIELNASLTGLSVYNNQLSSYPEQIGMLSELQVLNISCNQMT 72

Query: 106 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164
           +      QLR L +LDL +N LS LP  +GK+T L  L L+ N L  +         PA 
Sbjct: 73  KIPDSIGQLRALEMLDLGHNRLSELPDTMGKLTQLIYLYLSNNSLTDI---------PAT 123

Query: 165 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
              LR+                            + L++   +L+AIP  ++    + +L
Sbjct: 124 FSALRNL---------------------------RYLNITDNHLTAIPEAVFAMSALEEL 156

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
            L  N I  L  ++S   +LQ L L  N    +PD+I                       
Sbjct: 157 RLYNNKISVLAEKISELKNLQELHLMNNHFSQFPDSI----------------------- 193

Query: 285 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
               +  L++LD+S N I S+P++  F+ L HLQ+L  R   L E P  I  L QL+ LD
Sbjct: 194 --GQLTQLRVLDISGNRIKSIPDS--FAQLNHLQDLNFRFNNLSEVPDTIAALTQLQTLD 249

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L  N+L S+PE  + L +L  LDL  N+ +  P +L 
Sbjct: 250 LRANNLASLPESIQELKNLKRLDLRWNSFTTYPEQLA 286



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 109/217 (50%), Gaps = 10/217 (4%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           I M + L V    L++    ++ IP  I +   +  LDL  N + ELP  +     L  L
Sbjct: 55  IGMLSELQV----LNISCNQMTKIPDSIGQLRALEMLDLGHNRLSELPDTMGKLTQLIYL 110

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            LS N + D P A  ++L +L  L + +N L  +P   F  +  L+ L L  N I+ L E
Sbjct: 111 YLSNNSLTDIP-ATFSALRNLRYLNITDNHLTAIPEAVFA-MSALEELRLYNNKISVLAE 168

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
               S L +LQEL+L      + P  I +L QLR+LD+S N ++SIP+ F  L  L +L+
Sbjct: 169 --KISELKNLQELHLMNNHFSQFPDSIGQLTQLRVLDISGNRIKSIPDSFAQLNHLQDLN 226

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              NN+S +P  +  L   LQ L L  N L S+  +I
Sbjct: 227 FRFNNLSEVPDTIAAL-TQLQTLDLRANNLASLPESI 262



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 128/284 (45%), Gaps = 40/284 (14%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           LT L    N L+  PE IG LS L  L++  N++  IP SI    +L    +G+N LS L
Sbjct: 38  LTGLSVYNNQLSSYPEQIGMLSELQVLNISCNQMTKIPDSIGQLRALEMLDLGHNRLSEL 97

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +GKL++L  L L +N L +       LR L  L++++N L+ +P  +  M+ L +L 
Sbjct: 98  PDTMGKLTQLIYLYLSNNSLTDIPATFSALRNLRYLNITDNHLTAIPEAVFAMSALEELR 157

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N +  L   +      + LK L                              +EL L
Sbjct: 158 LYNNKISVLAEKI------SELKNL------------------------------QELHL 181

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
              + S  P  I +  ++  LD+S N I+ +P   +    LQ L    N + + PD I  
Sbjct: 182 MNNHFSQFPDSIGQLTQLRVLDISGNRIKSIPDSFAQLNHLQDLNFRFNNLSEVPDTI-A 240

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
           +L+ L  L L  N L  +P +  +++  L+ LDL +N   + PE
Sbjct: 241 ALTQLQTLDLRANNLASLP-ESIQELKNLKRLDLRWNSFTTYPE 283



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 121/246 (49%), Gaps = 15/246 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++  N++T + ++ I     L  L    N L+ +P+T+G L++LI L L  N +  IP+
Sbjct: 64  LNISCNQMTKIPDS-IGQLRALEMLDLGHNRLSELPDTMGKLTQLIYLYLSNNSLTDIPA 122

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           + S   +L    + +N L+A+P  +  +S L  L L++N++     +  +L+ L  L L 
Sbjct: 123 TFSALRNLRYLNITDNHLTAIPEAVFAMSALEELRLYNNKISVLAEKISELKNLQELHLM 182

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN  S  P  IG++T LR L ++GN ++++  S         L +  + L E  D+ A+ 
Sbjct: 183 NNHFSQFPDSIGQLTQLRVLDISGNRIKSIPDSFAQLNHLQDLNFRFNNLSEVPDTIAAL 242

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
           T+              + L L   NL+++P  I E   + +LDL  NS    P +L+S  
Sbjct: 243 TQ-------------LQTLDLRANNLASLPESIQELKNLKRLDLRWNSFTTYPEQLASLV 289

Query: 243 SLQTLI 248
               LI
Sbjct: 290 KQGCLI 295



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 24/130 (18%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  NK++VL+   I+    L EL    N  +  P++IG L++L  LD+  NRI S
Sbjct: 153 LEELRLYNNKISVLAEK-ISELKNLQELHLMNNHFSQFPDSIGQLTQLRVLDISGNRIKS 211

Query: 61  I-----------------------PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           I                       P +I+    L    +  N L++LP  + +L  L  L
Sbjct: 212 IPDSFAQLNHLQDLNFRFNNLSEVPDTIAALTQLQTLDLRANNLASLPESIQELKNLKRL 271

Query: 98  DLHSNQLKEY 107
           DL  N    Y
Sbjct: 272 DLRWNSFTTY 281


>gi|354482726|ref|XP_003503548.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Cricetulus griseus]
          Length = 556

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 173/392 (44%), Gaps = 21/392 (5%)

Query: 41  TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE---FYMGNNALSALPAELGKLSKLGTL 97
            +  L  L  L L+   +  +P+ I  C SL     F +  N L +LP E+   +KL  +
Sbjct: 111 VLSCLRTLRELRLYDTGLREVPTVI--CKSLHHLQLFGLSGNHLESLPKEIVNQTKLREI 168

Query: 98  DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            L  NQ   +  + C L  L V+D+  N L  +P EIG +  L+K  +  N L  L  SL
Sbjct: 169 YLKKNQFFVFPPDLCVLVNLEVIDMDYNKLKAIPEEIGNLVKLQKFYVASNHLPLLPESL 228

Query: 157 VNGPTPALLKY---LRSRLPENEDSEASTTK--EDLITMATRL---SVTSKELSLEGMNL 208
                  +L     L   LP             E+ +    RL   +++ + L +   +L
Sbjct: 229 SQCSRLTVLDLTHNLLHSLPXXXXXXXXXXXLSENRLEKVPRLLCRAISLQLLYMRNTSL 288

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
             +         +  LDLS+N I   P ++ +  +L+ L L  NK+   P   + SL  L
Sbjct: 289 RGLRRSFKRLVNLRFLDLSQNHIDHFPAQICALKNLEILALDDNKVGQLPPN-MGSLIRL 347

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQIL---DLSYNIASLPENPPFSSLPHLQELYLRRMQ 325
             L L  N     P + F  + + ++    D    I+ +PEN     L +L+ELY+    
Sbjct: 348 KTLGLTGNDFSSFPEEIFSVVTLEKLYIGQDQGCKISCIPEN--ICKLQNLKELYIENNL 405

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L + P  +  +  L +LD   N L+ +P+   +   L EL L DN ++ LP  L LLE +
Sbjct: 406 LEQLPVSLGLMPNLEVLDCRHNLLKQLPDAICHAQGLKELLLEDNLLTCLPENLDLLE-N 464

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           L+ L L  NP+      +  +G  A+ KYLK+
Sbjct: 465 LKVLTLMSNPMEDPPIRVCAQGNDAIWKYLKE 496



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 170/379 (44%), Gaps = 45/379 (11%)

Query: 74  FYM--GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 130
           F+M   N  L  +P+E+  L +L  L L +NQ+ E   +   L+ + VL L  N+L  L 
Sbjct: 26  FFMDGSNQNLKTIPSEILALKELEELHLENNQISEIDPDIQHLKNVRVLYLHKNNLQFLC 85

Query: 131 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 190
            E+  +++L  L ++ NPL  L SSL   P  + L+ LR      E     T   ++ T+
Sbjct: 86  QELASLSSLESLDVSSNPL--LYSSL---PVLSCLRTLR------ELRLYDTGLREVPTV 134

Query: 191 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 250
             +     +   L G +L ++P EI    ++ ++ L +N     PP+L    +L+ + + 
Sbjct: 135 ICKSLHHLQLFGLSGNHLESLPKEIVNQTKLREIYLKKNQFFVFPPDLCVLVNLEVIDMD 194

Query: 251 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLP---- 305
            NK+K  P+ I  +L  L    + +N L  +P +       L +LDL++N+  SLP    
Sbjct: 195 YNKLKAIPEEI-GNLVKLQKFYVASNHLPLLP-ESLSQCSRLTVLDLTHNLLHSLPXXXX 252

Query: 306 ---------ENPPFSSLPHL-------QELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
                    EN     +P L       Q LY+R   LR       RL  LR LDLSQN +
Sbjct: 253 XXXXXXXLSENR-LEKVPRLLCRAISLQLLYMRNTSLRGLRRSFKRLVNLRFLDLSQNHI 311

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTK 409
              P     L +L  L L DN +  LPP +G L   L+ L L GN   S    I    T 
Sbjct: 312 DHFPAQICALKNLEILALDDNKVGQLPPNMGSL-IRLKTLGLTGNDFSSFPEEIFSVVTL 370

Query: 410 AVLKYLKDK------IPEN 422
             L   +D+      IPEN
Sbjct: 371 EKLYIGQDQGCKISCIPEN 389


>gi|281341775|gb|EFB17359.1| hypothetical protein PANDA_007969 [Ailuropoda melanoleuca]
          Length = 1412

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 190/401 (47%), Gaps = 64/401 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG------------- 128
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S              
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 129 ----------LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
                     LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +
Sbjct: 143 LYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFT 197

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E     E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +
Sbjct: 198 EVPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGI 249

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S
Sbjct: 250 SACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLVSIEELDCS 307

Query: 299 YN-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRL 336
           +N + +LP +                     P   S  ++  L+L   +L   P ++  +
Sbjct: 308 FNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDM 367

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 368 QKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDVSKNNIEMIEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NMRTFAADHNYLQQL 337


>gi|302796452|ref|XP_002979988.1| hypothetical protein SELMODRAFT_178079 [Selaginella moellendorffii]
 gi|300152215|gb|EFJ18858.1| hypothetical protein SELMODRAFT_178079 [Selaginella moellendorffii]
          Length = 704

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 138/413 (33%), Positives = 213/413 (51%), Gaps = 32/413 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 59
           +  LD+ GN  +      ++S + L+ +    NLL+G +P   G LS L  L L  N+  
Sbjct: 171 LQALDLSGNYFSGELPPDVSSMSNLSYVDLGGNLLSGHIPPQFGELSNLKYLTLAANQFT 230

Query: 60  -SIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS 117
            SIP  +    +L   Y+G N+L+  +P+ LG L+ L  LDL  N L     E+  L +S
Sbjct: 231 GSIPPELGQLANLEWLYLGYNSLTGSIPSALGSLASLKHLDLVHNNLTGAIPESLSLLVS 290

Query: 118 V--LDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           +  L L +NSLSG +PP++G+++ L  L L+ N L        +G  PA L  L      
Sbjct: 291 LDTLFLYSNSLSGPIPPQLGQLSGLVSLDLSINSL--------SGEIPAELGDLLGLELL 342

Query: 175 NE-DSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-IPSEIWE-AGEITKLDLSRNSI 231
           N   +  + +    +    RL    + L+L   +LS  IP+E+   A  +T LDLS NS 
Sbjct: 343 NLFGNRLTGSIPSSLARLPRL----RNLALWKNDLSGDIPAELGTYAPNLTTLDLSSNSF 398

Query: 232 Q-ELPPEL---SSCASLQTLILSRNKIKD-WPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
             ++PP L   S  + L+ LIL  N +    PD+I T+  SL  ++L++N L     D  
Sbjct: 399 TGQIPPFLCMSSRTSQLRRLILFSNLLSGPIPDSIATNCLSLERIRLEDNLLSGSLPDTL 458

Query: 287 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLRE-APTDILRLQQLRILDLS 345
             +P L  LD+S N+ + P +  FS    LQ L++   QL    P  + R  +L  LD+S
Sbjct: 459 TSMPRLTYLDISSNVLTGPLS--FSVNSPLQVLFVHHNQLSGPIPETVGRATKLVRLDMS 516

Query: 346 QNSLQS-IPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGNPL 396
            N L   IP+  ++++SL+ELD+SDN+++  +P E+    P L +LRL GN L
Sbjct: 517 HNFLSGRIPKELQDMSSLSELDVSDNHLTGPIPSEISNC-PRLVSLRLRGNHL 568



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 185/422 (43%), Gaps = 49/422 (11%)

Query: 29  IASKNLLNGMPETIGSLSRLIRLDL-HQNRILSIPSSISGCCSLAEFYMGNNALSA-LPA 86
           +   +L   +P  +GSL+ L  LDL H N   +IP S+S   SL   ++ +N+LS  +P 
Sbjct: 248 LGYNSLTGSIPSALGSLASLKHLDLVHNNLTGAIPESLSLLVSLDTLFLYSNSLSGPIPP 307

Query: 87  ELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLL 143
           +LG+LS L +LDL  N L           L L +L+L  N L+G +P  + ++  LR L 
Sbjct: 308 QLGQLSGLVSLDLSINSLSGEIPAELGDLLGLELLNLFGNRLTGSIPSSLARLPRLRNLA 367

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE--DLITMATRLS------ 195
           L  N L        +G  PA L      L   + S  S T +    + M++R S      
Sbjct: 368 LWKNDL--------SGDIPAELGTYAPNLTTLDLSSNSFTGQIPPFLCMSSRTSQLRRLI 419

Query: 196 -------------VTSKELSLEGMNL------SAIPSEIWEAGEITKLDLSRNSIQELPP 236
                        + +  LSLE + L       ++P  +     +T LD+S N +   P 
Sbjct: 420 LFSNLLSGPIPDSIATNCLSLERIRLEDNLLSGSLPDTLTSMPRLTYLDISSNVLTG-PL 478

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPMLQIL 295
             S  + LQ L +  N++       +   + L  L + +N L  ++P +  +D+  L  L
Sbjct: 479 SFSVNSPLQVLFVHHNQLSGPIPETVGRATKLVRLDMSHNFLSGRIPKE-LQDMSSLSEL 537

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQ-SIP 353
           D+S N  + P     S+ P L  L LR   L    P  +  ++ L +LD+S N L  +IP
Sbjct: 538 DVSDNHLTGPIPSEISNCPRLVSLRLRGNHLSGHIPASLASVRLLGLLDISSNLLTGTIP 597

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
                + SL   + SDN ++   P+ G+L  +L      GN     R+   D G K    
Sbjct: 598 PLLTAMPSLIFANFSDNRLTGPVPDTGVLS-ALSQSSFRGNAGLCGRK---DLGLKPCWN 653

Query: 414 YL 415
           +L
Sbjct: 654 FL 655



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 5/149 (3%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-I 61
           L V  N+L+      +   T L  L  S N L+G +P+ +  +S L  LD+  N +   I
Sbjct: 489 LFVHHNQLSGPIPETVGRATKLVRLDMSHNFLSGRIPKELQDMSSLSELDVSDNHLTGPI 548

Query: 62  PSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSV 118
           PS IS C  L    +  N LS  +PA L  +  LG LD+ SN L      +      L  
Sbjct: 549 PSEISNCPRLVSLRLRGNHLSGHIPASLASVRLLGLLDISSNLLTGTIPPLLTAMPSLIF 608

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGN 147
            + S+N L+G  P+ G ++ L +    GN
Sbjct: 609 ANFSDNRLTGPVPDTGVLSALSQSSFRGN 637



 Score = 43.1 bits (100), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 138/335 (41%), Gaps = 70/335 (20%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 59
           +  LD+  N LT      ++    L  L    N L+G +P  +G LS L+ LDL  N + 
Sbjct: 267 LKHLDLVHNNLTGAIPESLSLLVSLDTLFLYSNSLSGPIPPQLGQLSGLVSLDLSINSLS 326

Query: 60  S-IPSSISGCCSLAEFY-MGNNALSALPAELGKLSKLGTLDLHSNQLKEYC---VEACQL 114
             IP+ +     L      GN    ++P+ L +L +L  L L  N L       +     
Sbjct: 327 GEIPAELGDLLGLELLNLFGNRLTGSIPSSLARLPRLRNLALWKNDLSGDIPAELGTYAP 386

Query: 115 RLSVLDLSNNSLSG-LPPEI---GKMTTLRKLLLTGNPLRTLRSSLVNGPTP-----ALL 165
            L+ LDLS+NS +G +PP +    + + LR+L+L  N        L++GP P       L
Sbjct: 387 NLTTLDLSSNSFTGQIPPFLCMSSRTSQLRRLILFSN--------LLSGPIPDSIATNCL 438

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRL----------------SVTS--KELSLEGMN 207
              R RL   ED+  S +  D +T   RL                SV S  + L +    
Sbjct: 439 SLERIRL---EDNLLSGSLPDTLTSMPRLTYLDISSNVLTGPLSFSVNSPLQVLFVHHNQ 495

Query: 208 LSA-IPSEIWEAGEITKLDLSRN--------------SIQEL-----------PPELSSC 241
           LS  IP  +  A ++ +LD+S N              S+ EL           P E+S+C
Sbjct: 496 LSGPIPETVGRATKLVRLDMSHNFLSGRIPKELQDMSSLSELDVSDNHLTGPIPSEISNC 555

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
             L +L L  N +     A L S+  L  L + +N
Sbjct: 556 PRLVSLRLRGNHLSGHIPASLASVRLLGLLDISSN 590


>gi|124006408|ref|ZP_01691242.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988065|gb|EAY27736.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 399

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 169/371 (45%), Gaps = 41/371 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L V GNK+ VL +  I     L EL  + N L+ +PE+IG L +L  L L+ N +  +P 
Sbjct: 51  LGVSGNKIEVLPST-IDKLQQLEELWFNHNHLHTLPESIGKLKKLHELWLNHNHLTKLPE 109

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           SI     L + ++ +N L+ LP  +GKL  LG L+L  N L E      +L+ L  L L+
Sbjct: 110 SIGELDHLEDLWLDHNQLTVLPESIGKLEHLGILNLGHNDLIELPESISKLQNLKSLYLN 169

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP  IG +  L+ L    N L+++   +        LKYL       + +  + 
Sbjct: 170 KNKLAVLPESIGLLQNLQYLDAQSNRLQSIPEEIGQLKN---LKYLSV-----DGNHLAV 221

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
             E +  +        KEL L    L+ +P+ I +   +  L L  N +  LPP      
Sbjct: 222 VPESIGELEHL-----KELHLSHNRLTFLPASIAQLKTLKDLYLLYNKLTGLPPGFGKLQ 276

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
            L+ + LS N+I  +P AI T L+ L  L LD+N L  +P++   ++  L++L L+ N  
Sbjct: 277 HLKDINLSHNRITTFPIAI-TKLTQLKSLALDSNQLTSLPAN-VGNLEQLEVLSLNDN-- 332

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
                                 QL + P  I +L  L  L L  N L  +P   +NL +L
Sbjct: 333 ----------------------QLIKLPKSIGKLTNLTTLSLINNKLTDVPIEIQNLPNL 370

Query: 363 TELDLSDNNIS 373
             L L  N IS
Sbjct: 371 EYLVLEGNPIS 381



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 165/386 (42%), Gaps = 64/386 (16%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P+ I  L  L+ L +  N+I  +PS+I     L E +  +N L  LP  +GKL KL
Sbjct: 35  LTSLPKGIDRLPGLLVLGVSGNKIEVLPSTIDKLQQLEELWFNHNHLHTLPESIGKLKKL 94

Query: 95  GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L L+ N L +      +L  L  L L +N L+ LP  IGK+  L  L L  N L  L 
Sbjct: 95  HELWLNHNHLTKLPESIGELDHLEDLWLDHNQLTVLPESIGKLEHLGILNLGHNDLIELP 154

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
            S+      + L+ L+S                              L L    L+ +P 
Sbjct: 155 ESI------SKLQNLKS------------------------------LYLNKNKLAVLPE 178

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
            I     +  LD   N +Q +P E+    +L+ L +  N +   P++I   L  L  L L
Sbjct: 179 SIGLLQNLQYLDAQSNRLQSIPEEIGQLKNLKYLSVDGNHLAVVPESI-GELEHLKELHL 237

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
            +N L  +P+     +  L+ L L YN +  LP  P F  L HL+++ L   ++   P  
Sbjct: 238 SHNRLTFLPA-SIAQLKTLKDLYLLYNKLTGLP--PGFGKLQHLKDINLSHNRITTFPIA 294

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE--------- 383
           I +L QL+ L L  N L S+P    NL  L  L L+DN +  LP  +G L          
Sbjct: 295 ITKLTQLKSLALDSNQLTSLPANVGNLEQLEVLSLNDNQLIKLPKSIGKLTNLTTLSLIN 354

Query: 384 -------------PSLQALRLDGNPL 396
                        P+L+ L L+GNP+
Sbjct: 355 NKLTDVPIEIQNLPNLEYLVLEGNPI 380



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 109/218 (50%), Gaps = 12/218 (5%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L + G  +  +PS I +  ++ +L  + N +  LP  +     L  L L+ N +   P++
Sbjct: 51  LGVSGNKIEVLPSTIDKLQQLEELWFNHNHLHTLPESIGKLKKLHELWLNHNHLTKLPES 110

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I   L  L  L LD+N L  +P +    +  L IL+L +N +  LPE+   S L +L+ L
Sbjct: 111 I-GELDHLEDLWLDHNQLTVLP-ESIGKLEHLGILNLGHNDLIELPES--ISKLQNLKSL 166

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
           YL + +L   P  I  LQ L+ LD   N LQSIPE    L +L  L +  N+++ +P  +
Sbjct: 167 YLNKNKLAVLPESIGLLQNLQYLDAQSNRLQSIPEEIGQLKNLKYLSVDGNHLAVVPESI 226

Query: 380 GLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           G LE  L+ L L  N L  +  +I      A LK LKD
Sbjct: 227 GELE-HLKELHLSHNRLTFLPASI------AQLKTLKD 257



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 9/196 (4%)

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
           + KL++S   +  LP  +     L  L +S NKI+  P  I   L  L  L  ++N L  
Sbjct: 25  VHKLNISNQQLTSLPKGIDRLPGLLVLGVSGNKIEVLPSTI-DKLQQLEELWFNHNHLHT 83

Query: 281 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
           +P +    +  L  L L++N +  LPE+     L HL++L+L   QL   P  I +L+ L
Sbjct: 84  LP-ESIGKLKKLHELWLNHNHLTKLPES--IGELDHLEDLWLDHNQLTVLPESIGKLEHL 140

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            IL+L  N L  +PE    L +L  L L+ N ++ LP  +GLL+ +LQ L    N L+SI
Sbjct: 141 GILNLGHNDLIELPESISKLQNLKSLYLNKNKLAVLPESIGLLQ-NLQYLDAQSNRLQSI 199

Query: 400 RRTILDRGTKAVLKYL 415
              I   G    LKYL
Sbjct: 200 PEEI---GQLKNLKYL 212


>gi|338718816|ref|XP_001915867.2| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Equus caballus]
          Length = 1374

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 189/401 (47%), Gaps = 64/401 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG------------- 128
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S              
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 129 ----------LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
                     LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +
Sbjct: 143 LYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFT 197

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E     E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +
Sbjct: 198 EVPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGI 249

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           S+C +LQ L+LS N ++  P+ I  SL +L+ LK+D N L  +P D    +  ++ LD S
Sbjct: 250 SACENLQDLLLSSNSLQQLPETI-GSLKNLTTLKIDENQLMYLP-DSIGGLVSIEELDCS 307

Query: 299 YN-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRL 336
           +N I +LP +                     P   S  ++  L+L   +L   P ++  +
Sbjct: 308 FNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDM 367

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           Q+L++ +LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 368 QKLKVTNLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  L  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNLTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+   L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVTNLSDNRLKNLPFSFT 388



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ L  L + +N L  +P+    L S+ ELD S N I
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNLTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEI 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NIRTFAADHNYLQQL 337


>gi|321472408|gb|EFX83378.1| hypothetical protein DAPPUDRAFT_315899 [Daphnia pulex]
          Length = 630

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 205/480 (42%), Gaps = 87/480 (18%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++  + GNKL  L    I     L+ L  S+N L G+P+++ +L  L  LDL  N++  
Sbjct: 174 LTEFYLYGNKLACLPPE-IGCLVNLSTLALSENSLTGLPDSLANLRCLRVLDLRHNKLHD 232

Query: 61  IPSSISGCCSLAEFY-----------------------MGNNALSALPAELGKLSKLGTL 97
           IP  +    SL   +                       +  N +  LPA +G+L+ L T 
Sbjct: 233 IPDVVYKLHSLTTLFLRFNRIRVVGDEIRQLTHLTMLSLRENKIRELPAGIGRLTNLITF 292

Query: 98  DLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           D+  N L+    E    ++LS LDL +N L  +P  IG++  L +L L  N L ++  SL
Sbjct: 293 DVSHNHLEHLPEEIGNCVQLSSLDLQHNELLDIPESIGQLRNLNRLGLRYNRLTSVPRSL 352

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS------------KELSLE 204
            N           + +    D   S+  +      +R S T+              ++LE
Sbjct: 353 SNCVHMDEFNVEGNAISHLPDGLLSSLSQLTSITFSRNSFTAYPSGGPSQFINVHSINLE 412

Query: 205 GMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
              +  IP  I+  A  + KL++  N +  LP ++ +  ++  L L  N++   PD I  
Sbjct: 413 HNQVDKIPYGIFSRAKHLAKLNMKENLLTSLPLDIGTWVNMVELNLGTNQLNKVPDDI-A 471

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            L SL  L L NN L++VP +   ++  L++LDL  N                       
Sbjct: 472 LLQSLEVLILSNNNLKRVP-NSIGNLRKLRVLDLEEN----------------------- 507

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            +L   P +I  L+ L+ L +  N L S+P    +L++LT L + +NN+S +P E+G LE
Sbjct: 508 -KLETLPNEIGFLRDLKKLIVQSNQLTSLPRAVGHLSNLTYLSVGENNLSYIPEEIGTLE 566

Query: 384 -----------------------PSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
                                   SLQ + ++  PL  I   I+  G   V+++LK + P
Sbjct: 567 TLESLYLNDNLNLHNLPFELALCSSLQIMSIENCPLSQIPAEIVGGGPSLVIQFLKMQGP 626


>gi|71991531|ref|NP_001023851.1| Protein LET-413, isoform b [Caenorhabditis elegans]
 gi|76803776|sp|O61967.3|LAP1_CAEEL RecName: Full=Protein lap1; AltName: Full=Lethal protein 413
 gi|351062135|emb|CCD70054.1| Protein LET-413, isoform b [Caenorhabditis elegans]
          Length = 699

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 165/376 (43%), Gaps = 47/376 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L VL    I + T L EL  ++N +  +P+T+ +   L  L+L  N    +P 
Sbjct: 64  LDVSDNELAVLPAE-IGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPE 122

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           +I  C S+    +   +L+ LP+ +G L+ L  L+   N L+   +   +LR L  LDL 
Sbjct: 123 TICECSSITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLG 182

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS---RLPENEDSE 179
            N L  LP EIGK+T+LR+  +  N L +L  S+        L    +   RLPEN    
Sbjct: 183 QNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENLGRM 242

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            + T                +L++    +  +PS   E   +  L   RNS+  L  E+ 
Sbjct: 243 PNLT----------------DLNISINEIIELPSSFGELKRLQMLKADRNSLHNLTSEIG 286

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C SL  L L +N + D PD I   L  L+ L +D N L  +P D   +   L +L L  
Sbjct: 287 KCQSLTELYLGQNFLTDLPDTI-GDLRQLTTLNVDCNNLSDIP-DTIGNCKSLTVLSLRQ 344

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
           NI                        L E P  I + + L +LD++ N L  +P   K L
Sbjct: 345 NI------------------------LTELPMTIGKCENLTVLDVASNKLPHLPFTVKVL 380

Query: 360 TSLTELDLSDNNISAL 375
             L  L LS+N   ++
Sbjct: 381 YKLQALWLSENQTQSI 396



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 163/370 (44%), Gaps = 48/370 (12%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I  +  L +L  + N +  +   + SL  L  LD+  N +  +P+ I     L E  +  
Sbjct: 32  IFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPAEIGNLTQLIELNLNR 91

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N+++ LP  +     L TL+L SN         C+   +++L L+  SL+ LP  IG +T
Sbjct: 92  NSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSLTLLPSNIGSLT 151

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            LR L    N LRT+  S+V       L+ L                             
Sbjct: 152 NLRVLEARDNLLRTIPLSIVE------LRKL----------------------------- 176

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    L A+P+EI +   + +  +  NS+  LP  +S C  L  L +S N+I   
Sbjct: 177 -EELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQIIRL 235

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS----YNIASLPENPPFSSL 313
           P+  L  + +L+ L +  N + ++PS  F ++  LQ+L       +N+ S          
Sbjct: 236 PEN-LGRMPNLTDLNISINEIIELPS-SFGELKRLQMLKADRNSLHNLTS-----EIGKC 288

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
             L ELYL +  L + P  I  L+QL  L++  N+L  IP+   N  SLT L L  N ++
Sbjct: 289 QSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILT 348

Query: 374 ALPPELGLLE 383
            LP  +G  E
Sbjct: 349 ELPMTIGKCE 358



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 172/386 (44%), Gaps = 46/386 (11%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           +D  Q+ + +IPS I                        +  KL  L+L  N +KE    
Sbjct: 18  IDRSQSNLQAIPSDIF-----------------------RFRKLEDLNLTMNNIKELDHR 54

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
              LR L +LD+S+N L+ LP EIG +T L +L L  N +  L  ++ N     LL  L 
Sbjct: 55  LFSLRHLRILDVSDNELAVLPAEIGNLTQLIELNLNRNSIAKLPDTMQNC---KLLTTLN 111

Query: 170 ------SRLPENEDSEASTT-----KEDLITMATRLSVTSKELSLEGMN--LSAIPSEIW 216
                 +RLPE     +S T     +  L  + + +   +    LE  +  L  IP  I 
Sbjct: 112 LSSNPFTRLPETICECSSITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIV 171

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           E  ++ +LDL +N ++ LP E+    SL+   +  N +   PD+I +    L  L +  N
Sbjct: 172 ELRKLEELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSI-SGCRMLDQLDVSEN 230

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            + ++P +    +P L  L++S N I  LP +  F  L  LQ L   R  L    ++I +
Sbjct: 231 QIIRLP-ENLGRMPNLTDLNISINEIIELPSS--FGELKRLQMLKADRNSLHNLTSEIGK 287

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
            Q L  L L QN L  +P+   +L  LT L++  NN+S +P  +G  + SL  L L  N 
Sbjct: 288 CQSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIPDTIGNCK-SLTVLSLRQNI 346

Query: 396 LRSIRRTILDRGTKAVLKYLKDKIPE 421
           L  +  TI       VL    +K+P 
Sbjct: 347 LTELPMTIGKCENLTVLDVASNKLPH 372



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 139/293 (47%), Gaps = 45/293 (15%)

Query: 107 YCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
           +C+  ACQ ++  +D S ++L  +P +I +   L  L LT N ++ L   L +      L
Sbjct: 5   FCLPMACQRQVDSIDRSQSNLQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFS------L 58

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
           ++LR                        L V+  EL++       +P+EI    ++ +L+
Sbjct: 59  RHLRI-----------------------LDVSDNELAV-------LPAEIGNLTQLIELN 88

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           L+RNSI +LP  + +C  L TL LS N     P+ I    SS++ L L+   L  +PS+ 
Sbjct: 89  LNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETI-CECSSITILSLNETSLTLLPSN- 146

Query: 286 FKDIPMLQILDLSYNIASLPENPPFS--SLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
              +  L++L+   N   L    P S   L  L+EL L + +L   P +I +L  LR   
Sbjct: 147 IGSLTNLRVLEARDN---LLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFY 203

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           +  NSL S+P+       L +LD+S+N I  LP  LG + P+L  L +  N +
Sbjct: 204 VDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENLGRM-PNLTDLNISINEI 255



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 144/302 (47%), Gaps = 19/302 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L++  N  T L    I   + +T L  ++  L  +P  IGSL+ L  L+   N + +
Sbjct: 107 LTTLNLSSNPFTRLPET-ICECSSITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRT 165

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSV 118
           IP SI     L E  +G N L ALPAE+GKL+ L    +  N L      +  C++ L  
Sbjct: 166 IPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRM-LDQ 224

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LD+S N +  LP  +G+M  L  L ++ N +  L SS        +LK  R+ L  N  S
Sbjct: 225 LDVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNSL-HNLTS 283

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E    +          S+T  EL L    L+ +P  I +  ++T L++  N++ ++P  +
Sbjct: 284 EIGKCQ----------SLT--ELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIPDTI 331

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
            +C SL  L L +N + + P  I     +L+ L + +N L  +P    K +  LQ L LS
Sbjct: 332 GNCKSLTVLSLRQNILTELPMTI-GKCENLTVLDVASNKLPHLPF-TVKVLYKLQALWLS 389

Query: 299 YN 300
            N
Sbjct: 390 EN 391


>gi|421132147|ref|ZP_15592319.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410356394|gb|EKP03731.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 354

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 146/298 (48%), Gaps = 28/298 (9%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV---NGPTPALLKYLRSRL 172
           + VLDLS  +L+  P EIG+   L+KL L+GN L  L   +V   N    +L     + L
Sbjct: 43  VRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKEL----SLEGMNLS-----AIPSEIWEAGEITK 223
           P+  +   S    DL     +L    KE+    +LE +NLS     A+P EI +   +  
Sbjct: 103 PKEIEQLKSLKNLDL--FRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQI 160

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           L L  N I  LP E+     L+ LIL  N+ K+ P   L  L +L  L L  N L  +P 
Sbjct: 161 LKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEAL-QLKNLQKLNLSENQLISIP- 218

Query: 284 DGFKDIPMLQ-----ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
              K+I  LQ     +LD +  I  LP       L +LQELYL   Q    P +I +L+ 
Sbjct: 219 ---KEILQLQNLRDLVLDRNQ-ITILP--TEVLQLQNLQELYLSENQFTSLPKEIDKLKN 272

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           LR L L  N L ++P+    L +L  L+L +N ++ LP E+G L+ +LQ L LD NP 
Sbjct: 273 LRWLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQLK-NLQRLELDSNPF 329



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 143/296 (48%), Gaps = 24/296 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+ GN+LTVLS   I     L EL    N L  +P+ I  L  L  LDL +N++++
Sbjct: 66  LQKLDLSGNELTVLSKE-IVQLQNLQELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLMT 124

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL----KEYCVEACQLRL 116
           +P  +    +L +  +  N L+A+P E+G+L  L  L L  NQ+    KE  +E  Q  L
Sbjct: 125 VPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVSLPKE--IEGLQ-EL 181

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 176
             L L NN    +P E  ++  L+KL L+ N L ++   ++       L+ LR  +    
Sbjct: 182 KELILENNRFKNVPGEALQLKNLQKLNLSENQLISIPKEILQ------LQNLRDLVL--- 232

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
           D    T    L T   +L    +EL L     +++P EI +   +  L L  N +  LP 
Sbjct: 233 DRNQITI---LPTEVLQLQ-NLQELYLSENQFTSLPKEIDKLKNLRWLSLKNNRLTTLPK 288

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
           E+    +LQ L L  N++ + P  I   L +L  L+LD+NP    P +  K + +L
Sbjct: 289 EIGQLKNLQRLELGNNQLTNLPKEI-GQLKNLQRLELDSNPFS--PKEKEKVVKLL 341



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 140/315 (44%), Gaps = 42/315 (13%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L   P+ IG    L +LDL  N +  +   I    +L E  + +N L+ LP E+ +L  L
Sbjct: 53  LTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNLPKEIEQLKSL 112

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDL  NQL     E   L+ L  L+LS N L+ +P EIG++  L+ L L  N + +L 
Sbjct: 113 KNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVSL- 171

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
                   P  ++ L+                             KEL LE      +P 
Sbjct: 172 --------PKEIEGLQEL---------------------------KELILENNRFKNVPG 196

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           E  +   + KL+LS N +  +P E+    +L+ L+L RN+I   P  +L  L +L  L L
Sbjct: 197 EALQLKNLQKLNLSENQLISIPKEILQLQNLRDLVLDRNQITILPTEVL-QLQNLQELYL 255

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
             N    +P +    +  L+ L L  N + +LP+      L +LQ L L   QL   P +
Sbjct: 256 SENQFTSLPKE-IDKLKNLRWLSLKNNRLTTLPK--EIGQLKNLQRLELGNNQLTNLPKE 312

Query: 333 ILRLQQLRILDLSQN 347
           I +L+ L+ L+L  N
Sbjct: 313 IGQLKNLQRLELDSN 327



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 115/239 (48%), Gaps = 27/239 (11%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A + S   + L L   NL++ P EI +   + KLDLS N +  L  E+    +LQ L
Sbjct: 33  LTKALQNSSNVRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQEL 92

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-------------------KD 288
            L  NK+ + P  I   L SL  L L  N L  VP +                     K+
Sbjct: 93  SLHSNKLTNLPKEI-EQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKE 151

Query: 289 IPM---LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
           I     LQIL L +N I SLP+      L  L+EL L   + +  P + L+L+ L+ L+L
Sbjct: 152 IGQLKNLQILKLDHNQIVSLPK--EIEGLQELKELILENNRFKNVPGEALQLKNLQKLNL 209

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           S+N L SIP+    L +L +L L  N I+ LP E+  L+ +LQ L L  N   S+ + I
Sbjct: 210 SENQLISIPKEILQLQNLRDLVLDRNQITILPTEVLQLQ-NLQELYLSENQFTSLPKEI 267


>gi|395735874|ref|XP_003776657.1| PREDICTED: protein LAP2 isoform 3 [Pongo abelii]
          Length = 1302

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 188/400 (47%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+A
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388


>gi|395825408|ref|XP_003785927.1| PREDICTED: protein LAP2 isoform 4 [Otolemur garnettii]
          Length = 1347

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 190/401 (47%), Gaps = 64/401 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG------------- 128
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S              
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 129 ----------LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
                     LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +
Sbjct: 143 LYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFT 197

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E     E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +
Sbjct: 198 EVPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGI 249

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S
Sbjct: 250 SACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLTSIEELDCS 307

Query: 299 YN-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRL 336
           +N + +LP +                     P   S  ++  L+L   +L   P ++  +
Sbjct: 308 FNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLEILPEEMGDM 367

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 368 QKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDVSKNNIEMIEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    LTS+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSVGQLT-NIRTFAADHNYLQQL 337


>gi|271966020|ref|YP_003340216.1| hypothetical protein [Streptosporangium roseum DSM 43021]
 gi|270509195|gb|ACZ87473.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 416

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 133/421 (31%), Positives = 195/421 (46%), Gaps = 69/421 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++LD+  N L+ + ++L      LTEL    N L  + +T+G L  L  LDL +N +  
Sbjct: 45  LARLDLSENNLSDIPSSL-RDLPALTELNLRANFLETVSDTLGDLVTLEVLDLRENGLSQ 103

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS--------------NQLKE 106
            P S+    +L E  +  N LSALP  L  L+ L  L+L S                L E
Sbjct: 104 APDSLGNLIALTELNLSENYLSALPDTLKNLTALTRLNLSSLGMLAPEFFPTLGLTTLPE 163

Query: 107 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           +        L+ LDLS+N L+ LP  +G +T L  L L+GN L TL  +L N        
Sbjct: 164 WLGNLTD--LTELDLSSNRLTALPEVLGNLTDLTLLNLSGNRLTTLPDTLGN-------- 213

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                        AS TK                LSL G  L+A+P  +    ++T+LDL
Sbjct: 214 ------------LASLTK----------------LSLYGNQLTALPETLGNLTDLTELDL 245

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S N +  LP  L + ASL  L L  N++   P+  L +L++L+ L L +N L  +P    
Sbjct: 246 SSNRLTTLPDTLGNLASLTMLSLYGNQLTALPET-LGNLTNLTELDLSSNRLTTLPE--- 301

Query: 287 KDIPMLQILDLSYNIA------SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
               +  + DL+  IA      ++PE      +  L  L L   +L   P  +  L  L 
Sbjct: 302 ---VLGNLTDLTTFIAHDNLLTAVPE--WLGDITDLTLLGLSGNRLTTLPDTLGNLTSLT 356

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIR 400
           +L L  N L ++PE   NLT LT+L+L +N ++ALP  LG L P L  + L GNP+ +  
Sbjct: 357 MLSLYGNQLTALPETLGNLTDLTDLELWNNRLTALPESLGDL-PDLTWINLSGNPIDADD 415

Query: 401 R 401
           R
Sbjct: 416 R 416



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 147/350 (42%), Gaps = 81/350 (23%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L+ +PE++  L+ L RLDL +N +  IPSS+    +L E  +  N L  +   LG L   
Sbjct: 32  LSEIPESLSDLTHLARLDLSENNLSDIPSSLRDLPALTELNLRANFLETVSDTLGDL--- 88

Query: 95  GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 154
                              + L VLDL  N LS  P  +G +  L +L L+ N L  L  
Sbjct: 89  -------------------VTLEVLDLRENGLSQAPDSLGNLIALTELNLSENYLSALPD 129

Query: 155 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL----SLEGMNLSA 210
           +L N                             +T  TRL+++S  +        + L+ 
Sbjct: 130 TLKN-----------------------------LTALTRLNLSSLGMLAPEFFPTLGLTT 160

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +P  +    ++T+LDLS N +  LP  L +   L  L LS N++   PD  L +L+SL+ 
Sbjct: 161 LPEWLGNLTDLTELDLSSNRLTALPEVLGNLTDLTLLNLSGNRLTTLPDT-LGNLASLTK 219

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 330
           L L  N L  +P                             +L  L EL L   +L   P
Sbjct: 220 LSLYGNQLTALPE-------------------------TLGNLTDLTELDLSSNRLTTLP 254

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
             +  L  L +L L  N L ++PE   NLT+LTELDLS N ++ LP  LG
Sbjct: 255 DTLGNLASLTMLSLYGNQLTALPETLGNLTNLTELDLSSNRLTTLPEVLG 304



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 89/184 (48%), Gaps = 17/184 (9%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L  + LS IP  + +   + +LDLS N++ ++P  L    +L  L L  N ++  
Sbjct: 22  STTLDLSSLGLSEIPESLSDLTHLARLDLSENNLSDIPSSLRDLPALTELNLRANFLETV 81

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
            D  L  L +L  L L  N L Q P D   ++  L  L+LS N +++LP+     +L  L
Sbjct: 82  SDT-LGDLVTLEVLDLRENGLSQAP-DSLGNLIALTELNLSENYLSALPDT--LKNLTAL 137

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L L  + +  AP     L            L ++PE   NLT LTELDLS N ++ALP
Sbjct: 138 TRLNLSSLGML-APEFFPTL-----------GLTTLPEWLGNLTDLTELDLSSNRLTALP 185

Query: 377 PELG 380
             LG
Sbjct: 186 EVLG 189


>gi|195399814|ref|XP_002058514.1| GJ14282 [Drosophila virilis]
 gi|194142074|gb|EDW58482.1| GJ14282 [Drosophila virilis]
          Length = 750

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 159/327 (48%), Gaps = 43/327 (13%)

Query: 94  LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L  LDL SN L     +   L  L+VL L +N+L  LPPEIGK+  L +L L  N L  L
Sbjct: 112 LENLDLSSNALSHISPKIENLLTLTVLQLHDNALVALPPEIGKLEKLVRLNLGHNKLSEL 171

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
              L + P    L++L   +  NE  E +    +L  +        + L     N++++P
Sbjct: 172 PIELFSLPE---LRHLN--ISHNEFIELNPDISNLHML--------EFLDAGNNNINSLP 218

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
             I     +T L L+ N I+ELPP++    SLQ L L +N +   P+  +  L  L CL 
Sbjct: 219 GGIGFLVRLTALLLANNHIKELPPDIVYMRSLQKLDLMKNDLIGLPED-MGLLRKLQCLY 277

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
           + +N ++++P             D   N A             L EL+     +   P D
Sbjct: 278 IQHNDIKELP-------------DFEGNEA-------------LNELHASNNFIERVPKD 311

Query: 333 IL-RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           +   L  L+ILDL  N +  +P+    L +L  LD+S+N+IS LP  L  L   L +L++
Sbjct: 312 LCANLPHLKILDLRDNKITQLPDEVCLLRNLNRLDVSNNSISVLPVTLASLA-HLISLQV 370

Query: 392 DGNPLRSIRRTILDRGTKAVLKYLKDK 418
           DGNP+++IRR IL  GT  +LK L+D+
Sbjct: 371 DGNPIKTIRRDILQCGTARILKTLQDR 397



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 114/228 (50%), Gaps = 32/228 (14%)

Query: 198 SKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNSIQELPPELSSCASLQT-LILSRNK 253
           ++ L++   NL+ +P+ ++E   A ++  +D +RN +   PP L   ++L T L+L+ N 
Sbjct: 549 TRTLAVNLENLTDVPTHVFELASAEKVHVVDFARNQLSAFPPGLQRMSNLVTELVLAHNV 608

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 313
           I   P   ++  + ++ L L NN ++ +P                         P F  L
Sbjct: 609 IASVP-TFISQFTRITFLNLSNNVIKDLP-------------------------PEFGLL 642

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP-EGFKNLTSLTELDLSDNNI 372
             L+EL +   +    P  +  LQ L IL  S N ++++   G ++L  L  LDL +N+I
Sbjct: 643 NTLRELNIANNRFEYLPKGLYELQGLEILVASDNHIKALNVAGLESLPRLNTLDLRNNDI 702

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
             +PP LG L  ++  L L GNP R  R  IL +GT A++ YL+D+IP
Sbjct: 703 EYVPPILGNLT-NITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRIP 749



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 2/172 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D   N+L+     L     ++TEL+ + N++  +P  I   +R+  L+L  N I  +P 
Sbjct: 578 VDFARNQLSAFPPGLQRMSNLVTELVLAHNVIASVPTFISQFTRITFLNLSNNVIKDLPP 637

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDL 121
                 +L E  + NN    LP  L +L  L  L    N +K   V   +   RL+ LDL
Sbjct: 638 EFGLLNTLRELNIANNRFEYLPKGLYELQGLEILVASDNHIKALNVAGLESLPRLNTLDL 697

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            NN +  +PP +G +T +  L L GNP R  R  ++   T A++ YLR R+P
Sbjct: 698 RNNDIEYVPPILGNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRIP 749



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 92/218 (42%), Gaps = 48/218 (22%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++  N+   L N  I++  ML  L A  N +N +P  IG L RL  L L  N I  
Sbjct: 181 LRHLNISHNEFIEL-NPDISNLHMLEFLDAGNNNINSLPGGIGFLVRLTALLLANNHIKE 239

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE-------------- 106
           +P  I    SL +  +  N L  LP ++G L KL  L +  N +KE              
Sbjct: 240 LPPDIVYMRSLQKLDLMKNDLIGLPEDMGLLRKLQCLYIQHNDIKELPDFEGNEALNELH 299

Query: 107 ------------YCV--------------------EACQLR-LSVLDLSNNSLSGLPPEI 133
                        C                     E C LR L+ LD+SNNS+S LP  +
Sbjct: 300 ASNNFIERVPKDLCANLPHLKILDLRDNKITQLPDEVCLLRNLNRLDVSNNSISVLPVTL 359

Query: 134 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 171
             +  L  L + GNP++T+R  ++   T  +LK L+ R
Sbjct: 360 ASLAHLISLQVDGNPIKTIRRDILQCGTARILKTLQDR 397



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 4/184 (2%)

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
           W    +  LDLS N++  + P++ +  +L  L L  N +   P  I   L  L  L L +
Sbjct: 107 WNQVPLENLDLSSNALSHISPKIENLLTLTVLQLHDNALVALPPEI-GKLEKLVRLNLGH 165

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
           N L ++P + F  +P L+ L++S+N   +  NP  S+L  L+ L      +   P  I  
Sbjct: 166 NKLSELPIELFS-LPELRHLNISHN-EFIELNPDISNLHMLEFLDAGNNNINSLPGGIGF 223

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L +L  L L+ N ++ +P     + SL +LDL  N++  LP ++GLL   LQ L +  N 
Sbjct: 224 LVRLTALLLANNHIKELPPDIVYMRSLQKLDLMKNDLIGLPEDMGLLR-KLQCLYIQHND 282

Query: 396 LRSI 399
           ++ +
Sbjct: 283 IKEL 286


>gi|456970650|gb|EMG11404.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 426

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 151/317 (47%), Gaps = 18/317 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  SKN L  +PE IG L  L +L L++N++ +IP  I    +L E  + +
Sbjct: 91  IGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAH 150

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP ++ +L +L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++ 
Sbjct: 151 NQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLR 210

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR----LPENEDSEASTTKEDLITMATR 193
            L  L L  N L  L   +       +L +LR+     LP+      +  K  L      
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQIL-HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLT 269

Query: 194 LSVTS-------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
                       ++L L    L+ +P EI +   + +LDL  N +  LP  +     LQT
Sbjct: 270 TLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQT 329

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           L L  N++   P+  L  L +L  L L++N L  +P +    +  LQ L+L YN +A+LP
Sbjct: 330 LYLGNNQLNVLPNK-LEQLQNLESLDLEHNQLNALPKE-IGKLQKLQTLNLKYNQLATLP 387

Query: 306 ENPPFSSLPHLQELYLR 322
           E      L +L++LYL 
Sbjct: 388 E--EIKQLKNLKKLYLH 402



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 184/423 (43%), Gaps = 74/423 (17%)

Query: 10  KLTVLSNNLIASWTMLTELIA----------SKNLLNGMPETIGSLSRLIRLDLHQNRIL 59
           KL   SN +   +  +TE++           S + L  +P  IG L  L  L+L  N+++
Sbjct: 26  KLQAQSNEVQTYYRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLI 85

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 118
           ++P  I    +L + ++  N L ALP E+G+L  L  L L+ NQL     E  QL+ L  
Sbjct: 86  ALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQE 145

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           L+L++N L+ LP +I ++  L+ L L  N   ++   +        L+ L S        
Sbjct: 146 LNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEI------GQLQNLES-------- 191

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                                 L L+   L+ +P EI +   +  L L  N +  LP E+
Sbjct: 192 ----------------------LGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEI 229

Query: 239 SSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDNN 276
               +LQ L L  N++   P  I                      +  L +L  LKL  N
Sbjct: 230 GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYEN 289

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            L  +P +    +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P  + +
Sbjct: 290 QLTTLPKE-IGQLQNLQELDLDGNQLITLPEN--IGQLQRLQTLYLGNNQLNVLPNKLEQ 346

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           LQ L  LDL  N L ++P+    L  L  L+L  N ++ LP E+  L+ +L+ L L  NP
Sbjct: 347 LQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK-NLKKLYLHNNP 405

Query: 396 LRS 398
           L S
Sbjct: 406 LPS 408



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 1/102 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD++GN+L  L  N I     L  L    N LN +P  +  L  L  LDL  N++ +
Sbjct: 304 LQELDLDGNQLITLPEN-IGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNA 362

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 102
           +P  I     L    +  N L+ LP E+ +L  L  L LH+N
Sbjct: 363 LPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404


>gi|418709217|ref|ZP_13270011.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770553|gb|EKR45772.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 412

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 151/317 (47%), Gaps = 18/317 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  SKN L  +PE IG L  L +L L++N++ +IP  I    +L E  + +
Sbjct: 77  IGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAH 136

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP ++ +L +L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++ 
Sbjct: 137 NQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLR 196

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR----LPENEDSEASTTKEDLITMATR 193
            L  L L  N L  L   +       +L +LR+     LP+      +  K  L      
Sbjct: 197 NLESLGLDHNQLNVLPKEIGQLQNLQIL-HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLT 255

Query: 194 LSVTS-------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
                       ++L L    L+ +P EI +   + +LDL  N +  LP  +     LQT
Sbjct: 256 TLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQT 315

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           L L  N++   P+  L  L +L  L L++N L  +P +    +  LQ L+L YN +A+LP
Sbjct: 316 LYLGNNQLNVLPNK-LEQLQNLESLDLEHNQLNALPKE-IGKLQKLQTLNLKYNQLATLP 373

Query: 306 ENPPFSSLPHLQELYLR 322
           E      L +L++LYL 
Sbjct: 374 E--EIKQLKNLKKLYLH 388



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 184/423 (43%), Gaps = 74/423 (17%)

Query: 10  KLTVLSNNLIASWTMLTELIA----------SKNLLNGMPETIGSLSRLIRLDLHQNRIL 59
           KL   SN +   +  +TE++           S + L  +P  IG L  L  L+L  N+++
Sbjct: 12  KLQAQSNEVQTYYRNITEVLKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLI 71

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 118
           ++P  I    +L + ++  N L ALP E+G+L  L  L L+ NQL     E  QL+ L  
Sbjct: 72  ALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQE 131

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           L+L++N L+ LP +I ++  L+ L L  N   ++   +        L+ L S        
Sbjct: 132 LNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEI------GQLQNLES-------- 177

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                                 L L+   L+ +P EI +   +  L L  N +  LP E+
Sbjct: 178 ----------------------LGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEI 215

Query: 239 SSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDNN 276
               +LQ L L  N++   P  I                      +  L +L  LKL  N
Sbjct: 216 GQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYEN 275

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            L  +P +    +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P  + +
Sbjct: 276 QLTTLPKE-IGQLQNLQELDLDGNQLITLPEN--IGQLQRLQTLYLGNNQLNVLPNKLEQ 332

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           LQ L  LDL  N L ++P+    L  L  L+L  N ++ LP E+  L+ +L+ L L  NP
Sbjct: 333 LQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK-NLKKLYLHNNP 391

Query: 396 LRS 398
           L S
Sbjct: 392 LPS 394



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 1/102 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD++GN+L  L  N I     L  L    N LN +P  +  L  L  LDL  N++ +
Sbjct: 290 LQELDLDGNQLITLPEN-IGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNA 348

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 102
           +P  I     L    +  N L+ LP E+ +L  L  L LH+N
Sbjct: 349 LPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 390


>gi|395825404|ref|XP_003785925.1| PREDICTED: protein LAP2 isoform 2 [Otolemur garnettii]
          Length = 1420

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLTSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLEILPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDVSKNNIEMIEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    LTS+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSVGQLT-NIRTFAADHNYLQQL 337


>gi|418717491|ref|ZP_13277153.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787088|gb|EKR80823.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 426

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 150/317 (47%), Gaps = 18/317 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  SKN L  +PE IG L  L +L L++N++ +IP  I    +L E  + +
Sbjct: 91  IGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAH 150

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP ++ +L +L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++ 
Sbjct: 151 NQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLR 210

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR----LPENEDSEASTTKEDLITMATR 193
            L  L L  N L  L   +       +L +LR+     LP+      +  K  L      
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQIL-HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLT 269

Query: 194 LSVTS-------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
                       ++L L    L+ +P EI +   + +LDL  N +  LP  +     LQT
Sbjct: 270 TLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQT 329

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           L L  N++   P  I   L +L  L L++N L  +P +    +  LQ L+L YN +A+LP
Sbjct: 330 LYLGNNQLNFLPKEI-GQLQNLESLDLEHNQLNALPKE-IGKLQKLQTLNLKYNQLATLP 387

Query: 306 ENPPFSSLPHLQELYLR 322
           E      L +L++LYL 
Sbjct: 388 E--EIKQLKNLKKLYLH 402



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 159/364 (43%), Gaps = 64/364 (17%)

Query: 59  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 117
           +++P  I    +L + ++  N L ALP E+G+L  L  L L+ NQL     E  QL+ L 
Sbjct: 85  IALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQ 144

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            L+L++N L+ LP +I ++  L+ L L  N   ++   +        L+ L S       
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEI------GQLQNLES------- 191

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                                  L L+   L+ +P EI +   +  L L  N +  LP E
Sbjct: 192 -----------------------LGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 228

Query: 238 LSSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDN 275
           +    +LQ L L  N++   P  I                      +  L +L  LKL  
Sbjct: 229 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE 288

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N L  +P +    +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P +I 
Sbjct: 289 NQLTTLPKE-IGQLQNLQELDLDGNQLTTLPEN--IGQLQRLQTLYLGNNQLNFLPKEIG 345

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           +LQ L  LDL  N L ++P+    L  L  L+L  N ++ LP E+  L+ +L+ L L  N
Sbjct: 346 QLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK-NLKKLYLHNN 404

Query: 395 PLRS 398
           PL S
Sbjct: 405 PLPS 408



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/132 (39%), Positives = 73/132 (55%), Gaps = 1/132 (0%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L   +N L  +P+ IG L  L  LDL  N++ ++P +I     L   Y+GN
Sbjct: 275 IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGN 334

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP E+G+L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++ 
Sbjct: 335 NQLNFLPKEIGQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK 394

Query: 138 TLRKLLLTGNPL 149
            L+KL L  NPL
Sbjct: 395 NLKKLYLHNNPL 406



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 118/229 (51%), Gaps = 7/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           + +EA T   + IT A +     + L+L G  L+ +P EI +   +  L+L  N +  LP
Sbjct: 30  QSNEAQTYYRN-ITEALKNPQNIRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALP 88

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L LS+N++   P+ I   L +L  LKL  N L  +P +    +  LQ L
Sbjct: 89  KEIGKLQNLQQLHLSKNQLMALPEEI-GQLQNLQKLKLYENQLTAIPKE-IGQLQNLQEL 146

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           +L++N +A+LPE+     L  LQ LYL   Q      +I +LQ L  L L  N L  +P+
Sbjct: 147 NLAHNQLATLPED--IEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK 204

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L  L L  N ++ LP E+G L+ +LQ L L  N L ++ + I
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQ-NLQILHLRNNQLTTLPKEI 252


>gi|327403778|ref|YP_004344616.1| adenylate cyclase [Fluviicola taffensis DSM 16823]
 gi|327319286|gb|AEA43778.1| Adenylate cyclase [Fluviicola taffensis DSM 16823]
          Length = 540

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 197/418 (47%), Gaps = 51/418 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ GNK+  L N+   S T L EL  SKN L+ +   IG+L++L+ L+L  NR+ ++P 
Sbjct: 91  LDLSGNKIGTLPNSF-WSLTSLKELSLSKNDLSSLSGLIGTLNQLVSLELSGNRLNTLPR 149

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I     L +  + NN LS+LP   G+L  L  + +  N++ +     C+LR L ++D  
Sbjct: 150 EIGLLTQLKKIDLTNNNLSSLPKSFGELKDLEEIFIAHNRISKVSKSWCRLRQLKIMDAG 209

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSR----LPENED 177
           NN L  LP +I ++  L  LLL  N L  L  S   G    L   YL+      LPE   
Sbjct: 210 NNRLKKLPNQIVQLQLLSVLLLDSNQLVCLPKSF--GQLENLSGIYLQHNSLKLLPE--- 264

Query: 178 SEASTTKEDLIT-------MATRLSVTSKEL----SLEGMN--LSAIPSEIWEAGEITKL 224
              S TK  LIT         TRL  +  E+     +   N  LS +P  I +   +  +
Sbjct: 265 ---SFTKLHLITSLEISENRITRLLSSLSEMRNLRQIYASNNLLSTLPDSIEKMKTLMIV 321

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
            L  N     P  L    S+  L L +N +K  P+  L S+++L+ L LD  P+    S+
Sbjct: 322 KLDHNQFSTFPESLLKSKSIIVLDLQQNGLKHVPELHL-SMTNLADLYLDQFPI----SE 376

Query: 285 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY---LRRMQLREAPTDILRLQQLRI 341
             K+I +   +D              S+L +  E+Y   L   +L+  P     L +LR 
Sbjct: 377 AIKEIKLYTSID--------------SALKYANEVYRLDLSYQKLQRLPESFGSLSELRW 422

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L+L+ N L  +PE FK+L  L  L +  N +  +   +  L+ +L+ L+L+GN L  +
Sbjct: 423 LNLNYNRLSELPESFKDLNKLKSLSIVANGLETIDSAICYLD-ALEELQLNGNKLSFV 479



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 183/395 (46%), Gaps = 27/395 (6%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N +  +P++I  L  +  LDL  N+I ++P+S     SL E  +  N LS+L   +G 
Sbjct: 71  SNNNIKYIPDSIQLLPMIEYLDLSGNKIGTLPNSFWSLTSLKELSLSKNDLSSLSGLIGT 130

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L++L +L+L  N+L     E   L +L  +DL+NN+LS LP   G++  L ++ +  N +
Sbjct: 131 LNQLVSLELSGNRLNTLPREIGLLTQLKKIDLTNNNLSSLPKSFGELKDLEEIFIAHNRI 190

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPE--------NEDSEASTTKEDLITMATRLSVTSK-- 199
             +  S        ++    +RL +           S        L+ +           
Sbjct: 191 SKVSKSWCRLRQLKIMDAGNNRLKKLPNQIVQLQLLSVLLLDSNQLVCLPKSFGQLENLS 250

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
            + L+  +L  +P    +   IT L++S N I  L   LS   +L+ +  S N +   PD
Sbjct: 251 GIYLQHNSLKLLPESFTKLHLITSLEISENRITRLLSSLSEMRNLRQIYASNNLLSTLPD 310

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 318
           +I   + +L  +KLD+N     P    K   ++ +LDL  N +  +PE     S+ +L +
Sbjct: 311 SI-EKMKTLMIVKLDHNQFSTFPESLLKSKSII-VLDLQQNGLKHVPE--LHLSMTNLAD 366

Query: 319 LYLRRMQLREAPTDI---------LRL-QQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 368
           LYL +  + EA  +I         L+   ++  LDLS   LQ +PE F +L+ L  L+L+
Sbjct: 367 LYLDQFPISEAIKEIKLYTSIDSALKYANEVYRLDLSYQKLQRLPESFGSLSELRWLNLN 426

Query: 369 DNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            N +S LP     L   L++L +  N L +I   I
Sbjct: 427 YNRLSELPESFKDLNK-LKSLSIVANGLETIDSAI 460



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 159/359 (44%), Gaps = 39/359 (10%)

Query: 21  SWTMLTELI---ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           SW  L +L    A  N L  +P  I  L  L  L L  N+++ +P S     +L+  Y+ 
Sbjct: 196 SWCRLRQLKIMDAGNNRLKKLPNQIVQLQLLSVLLLDSNQLVCLPKSFGQLENLSGIYLQ 255

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           +N+L  LP    KL  + +L++  N++        ++R L  +  SNN LS LP  I KM
Sbjct: 256 HNSLKLLPESFTKLHLITSLEISENRITRLLSSLSEMRNLRQIYASNNLLSTLPDSIEKM 315

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-EDLITMATRLS 195
            TL  + L  N   T   SL+   +  +L   ++ L    +   S T   DL      +S
Sbjct: 316 KTLMIVKLDHNQFSTFPESLLKSKSIIVLDLQQNGLKHVPELHLSMTNLADLYLDQFPIS 375

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              KE+ L     ++I S +  A E+ +LDLS   +Q LP    S + L+ L L+ N++ 
Sbjct: 376 EAIKEIKL----YTSIDSALKYANEVYRLDLSYQKLQRLPESFGSLSELRWLNLNYNRLS 431

Query: 256 DWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 313
           + P++   L  L SLS           + ++G + I                 +     L
Sbjct: 432 ELPESFKDLNKLKSLS-----------IVANGLETI-----------------DSAICYL 463

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             L+EL L   +L   P  I++L  L   +L QN ++ +P+ F  L +L  L L  NN+
Sbjct: 464 DALEELQLNGNKLSFVPDCIVQLNNLETFNLQQNYIEQLPDSFFELKNLKTLILYGNNL 522



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 170/424 (40%), Gaps = 81/424 (19%)

Query: 28  LIASKNLLNG--------MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           L AS N LN         + E + +  ++  L L  + +   PSSI    +L    + NN
Sbjct: 14  LYASSNTLNAQIKKIYYSLEEALKNKDQVYHLSLKGHVLNEFPSSIFEMKNLRSLNLSNN 73

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 138
            +  +P  +  L  +  LDL  N++         L  L  L LS N LS L   IG +  
Sbjct: 74  NIKYIPDSIQLLPMIEYLDLSGNKIGTLPNSFWSLTSLKELSLSKNDLSSLSGLIGTLNQ 133

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L  L L+GN L T                    LP              I + T+L    
Sbjct: 134 LVSLELSGNRLNT--------------------LPRE------------IGLLTQL---- 157

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           K++ L   NLS++P    E  ++ ++ ++ N I ++         L+ +    N++K  P
Sbjct: 158 KKIDLTNNNLSSLPKSFGELKDLEEIFIAHNRISKVSKSWCRLRQLKIMDAGNNRLKKLP 217

Query: 259 DAI----------------------LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           + I                         L +LS + L +N L+ +P + F  + ++  L+
Sbjct: 218 NQIVQLQLLSVLLLDSNQLVCLPKSFGQLENLSGIYLQHNSLKLLP-ESFTKLHLITSLE 276

Query: 297 LSYN-----IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           +S N     ++SL E      + +L+++Y     L   P  I +++ L I+ L  N   +
Sbjct: 277 ISENRITRLLSSLSE------MRNLRQIYASNNLLSTLPDSIEKMKTLMIVKLDHNQFST 330

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL-RSIRRTILDRGTKA 410
            PE      S+  LDL  N +  + PEL L   +L  L LD  P+  +I+   L     +
Sbjct: 331 FPESLLKSKSIIVLDLQQNGLKHV-PELHLSMTNLADLYLDQFPISEAIKEIKLYTSIDS 389

Query: 411 VLKY 414
            LKY
Sbjct: 390 ALKY 393



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 116/278 (41%), Gaps = 46/278 (16%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L+ +    N L  +PE+   L  +  L++ +NRI  + SS+S   +L + Y  NN LS L
Sbjct: 249 LSGIYLQHNSLKLLPESFTKLHLITSLEISENRITRLLSSLSEMRNLRQIYASNNLLSTL 308

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  + K+  L  + L  NQ   +     + + + VLDL  N L  +P     MT L  L 
Sbjct: 309 PDSIEKMKTLMIVKLDHNQFSTFPESLLKSKSIIVLDLQQNGLKHVPELHLSMTNLADLY 368

Query: 144 LTGNPL-RTLRSSLVNGPTPALLKYLR------------SRLPE---------------N 175
           L   P+   ++   +     + LKY               RLPE               N
Sbjct: 369 LDQFPISEAIKEIKLYTSIDSALKYANEVYRLDLSYQKLQRLPESFGSLSELRWLNLNYN 428

Query: 176 EDSEASTTKEDLITMATRLSVTS----------------KELSLEGMNLSAIPSEIWEAG 219
             SE   + +DL  + + LS+ +                +EL L G  LS +P  I +  
Sbjct: 429 RLSELPESFKDLNKLKS-LSIVANGLETIDSAICYLDALEELQLNGNKLSFVPDCIVQLN 487

Query: 220 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +   +L +N I++LP       +L+TLIL  N +K +
Sbjct: 488 NLETFNLQQNYIEQLPDSFFELKNLKTLILYGNNLKHY 525


>gi|421120079|ref|ZP_15580393.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347165|gb|EKO98084.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 426

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 152/317 (47%), Gaps = 18/317 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  SKN L  +PE IG L  L +L L++N++ +IP  I    +L E  + +
Sbjct: 91  IGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAH 150

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP ++ +L +L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++ 
Sbjct: 151 NQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLQ 210

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR----LPENEDSEASTTKEDLITMATR 193
            L  L L  N L  L   +       +L +LR+     LP+      +  K  L      
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQIL-HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLT 269

Query: 194 LSVTS-------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
                       ++L L    L+ +P EI +   + +LDL  N +  LP  +     LQT
Sbjct: 270 TLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQT 329

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           L L  N++   P+ +   L +L  L L++N L  +P +  K +  LQ L+L YN +A+LP
Sbjct: 330 LYLGNNQLNVLPNKV-EQLQNLESLDLEHNQLNALPKEIGK-LQKLQTLNLKYNQLATLP 387

Query: 306 ENPPFSSLPHLQELYLR 322
           E      L +L++LYL 
Sbjct: 388 E--EIKQLKNLKKLYLH 402



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 158/364 (43%), Gaps = 64/364 (17%)

Query: 59  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 117
           +++P  I    +L + ++  N L ALP E+G+L  L  L L+ NQL     E  QL+ L 
Sbjct: 85  IALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQ 144

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            L+L++N L+ LP +I ++  L+ L L  N   ++   +        L+ L S       
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEI------GQLQNLES------- 191

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                                  L L+   L+ +P EI +   +  L L  N +  LP E
Sbjct: 192 -----------------------LGLDHNQLNVLPKEIGQLQNLESLGLDHNQLNVLPKE 228

Query: 238 LSSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDN 275
           +    +LQ L L  N++   P  I                      +  L +L  LKL  
Sbjct: 229 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE 288

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N L  +P +    +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P  + 
Sbjct: 289 NQLTTLPKE-IGQLQNLQELDLDGNQLITLPEN--IGQLQRLQTLYLGNNQLNVLPNKVE 345

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           +LQ L  LDL  N L ++P+    L  L  L+L  N ++ LP E+  L+ +L+ L L  N
Sbjct: 346 QLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK-NLKKLYLHNN 404

Query: 395 PLRS 398
           PL S
Sbjct: 405 PLPS 408



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 1/102 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD++GN+L  L  N I     L  L    N LN +P  +  L  L  LDL  N++ +
Sbjct: 304 LQELDLDGNQLITLPEN-IGQLQRLQTLYLGNNQLNVLPNKVEQLQNLESLDLEHNQLNA 362

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 102
           +P  I     L    +  N L+ LP E+ +L  L  L LH+N
Sbjct: 363 LPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404


>gi|395825402|ref|XP_003785924.1| PREDICTED: protein LAP2 isoform 1 [Otolemur garnettii]
          Length = 1372

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLTSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLEILPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDVSKNNIEMIEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    LTS+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSVGQLT-NIRTFAADHNYLQQL 337


>gi|418668095|ref|ZP_13229499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756128|gb|EKR17754.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 427

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 151/317 (47%), Gaps = 18/317 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  SKN L  +PE IG L  L +L L++N++ +IP  I    +L E  + +
Sbjct: 91  IGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAH 150

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP ++ +L +L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++ 
Sbjct: 151 NQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLR 210

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR----LPENEDSEASTTKEDLITMATR 193
            L  L L  N L  L   +       +L +LR+     LP+      +  K  L      
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQIL-HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLT 269

Query: 194 LSVTS-------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
                       ++L L    L+ +P EI +   + +LDL  N +  LP  +     LQT
Sbjct: 270 TLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQT 329

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           L L  N++   P+  L  L +L  L L++N L  +P +    +  LQ L+L YN +A+LP
Sbjct: 330 LYLGNNQLNVLPNK-LEQLQNLESLDLEHNQLNALPKE-IGKLQKLQTLNLKYNQLATLP 387

Query: 306 ENPPFSSLPHLQELYLR 322
           E      L +L++LYL 
Sbjct: 388 E--EIKQLKNLKKLYLH 402



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 158/364 (43%), Gaps = 64/364 (17%)

Query: 59  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 117
           +++P  I    +L + ++  N L ALP E+G+L  L  L L+ NQL     E  QL+ L 
Sbjct: 85  IALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQ 144

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            L+L++N L+ LP +I ++  L+ L L  N   ++   +        L+ L S       
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEI------GQLQNLES------- 191

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                                  L L+   L+ +P EI +   +  L L  N +  LP E
Sbjct: 192 -----------------------LGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 228

Query: 238 LSSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDN 275
           +    +LQ L L  N++   P  I                      +  L +L  LKL  
Sbjct: 229 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYE 288

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N L  +P +    +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P  + 
Sbjct: 289 NQLTTLPKE-IGQLQNLQELDLDGNQLITLPEN--IGQLQRLQTLYLGNNQLNVLPNKLE 345

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           +LQ L  LDL  N L ++P+    L  L  L+L  N ++ LP E+  L+ +L+ L L  N
Sbjct: 346 QLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK-NLKKLYLHNN 404

Query: 395 PLRS 398
           PL S
Sbjct: 405 PLPS 408



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 73/132 (55%), Gaps = 1/132 (0%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L   +N L  +P+ IG L  L  LDL  N+++++P +I     L   Y+GN
Sbjct: 275 IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGN 334

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP +L +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++ 
Sbjct: 335 NQLNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK 394

Query: 138 TLRKLLLTGNPL 149
            L+KL L  NPL
Sbjct: 395 NLKKLYLHNNPL 406



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 1/102 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD++GN+L  L  N I     L  L    N LN +P  +  L  L  LDL  N++ +
Sbjct: 304 LQELDLDGNQLITLPEN-IGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNA 362

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 102
           +P  I     L    +  N L+ LP E+ +L  L  L LH+N
Sbjct: 363 LPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404


>gi|195451908|ref|XP_002073128.1| GK13318 [Drosophila willistoni]
 gi|194169213|gb|EDW84114.1| GK13318 [Drosophila willistoni]
          Length = 1874

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLQRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    S  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGSCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I R+ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGRMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLQRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 121/237 (51%), Gaps = 14/237 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L  G    + + +   L EN  SE   +    I   T+LS  
Sbjct: 268 RLTILKLDQNRLQRLNDTL--GSCENMQELI---LTENFLSELPAS----IGRMTKLS-- 316

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
              L+++   L  +P EI +   +  L L  N +++LPPEL +C  L  L +S N++
Sbjct: 317 --NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQL 371



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 153/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLETL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D       +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGSCENMQELILTENFLSELPAS--IGRMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 SNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + S   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGSCENMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|147857736|emb|CAN78669.1| hypothetical protein VITISV_031289 [Vitis vinifera]
          Length = 1146

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 202/455 (44%), Gaps = 77/455 (16%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSI 61
           L +  NK T      I + T LT L  S N L G +P  IGSL  L  L +H N +  SI
Sbjct: 318 LTLHSNKFTGKIPAQITNLTNLTILSMSFNFLTGELPSNIGSLHNLKNLTVHNNLLEGSI 377

Query: 62  PSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVE---ACQLRLS 117
           PSSI+ C  L    +  N ++  +P  LG+L  L  L L  N++     +    C   L+
Sbjct: 378 PSSITNCTHLVNIGLAYNMITGEIPQGLGQLPNLTFLGLGVNKMSGNIPDDLFNCS-NLA 436

Query: 118 VLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--RLPE 174
           +LDL+ N+ SG L P IGK+  L++L       +  ++SLV GP P  +  L     L  
Sbjct: 437 ILDLARNNFSGVLKPGIGKLYNLQRL-------QAHKNSLV-GPIPPEIGNLTQLFSLQL 488

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-E 233
           N +S + T   +L  ++    +   + +LEG    AIP EI+E   +++L L  N     
Sbjct: 489 NGNSLSGTVPPELSKLSLLQGLYLDDNALEG----AIPEEIFELKHLSELGLGDNRFAGH 544

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL-RQVPS--------- 283
           +P  +S   SL  L L+ N +     A +  LS L+ L L +N L   +P          
Sbjct: 545 IPHAVSKLESLLNLYLNGNVLNGSIPASMARLSRLAILDLSHNHLVGSIPGPVIASMKNM 604

Query: 284 ----------------DGFKDIPMLQILDLSYN--IASLPEN------------------ 307
                           D    + M+QI+D+S N    S+PE                   
Sbjct: 605 QIYLNFSHNFLSGPIPDEIGKLEMVQIVDMSNNNLSGSIPETLQGCRNLFNLDLSVNELS 664

Query: 308 -----PPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQS-IPEGFKNLT 360
                  F+ +  L  L L R  L    P  +  ++ L  LDLSQN  +  IPE + N++
Sbjct: 665 GPVPEKAFAQMDVLTSLNLSRNNLNGGLPGSLANMKNLSSLDLSQNKFKGMIPESYANIS 724

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           +L +L+LS N +    PE G+ + ++ A  L GNP
Sbjct: 725 TLKQLNLSFNQLEGRVPETGIFK-NVSASSLVGNP 758



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 128/410 (31%), Positives = 193/410 (47%), Gaps = 35/410 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSI 61
           LD+  N  T      +   + L EL   +N L+G +P  +G+L  L  LDL  N +  SI
Sbjct: 78  LDLSSNSFTGHIPPQLGLCSQLLELNLFQNSLSGSIPPELGNLRNLQSLDLGSNFLEGSI 137

Query: 62  PSSISGCCSLAEF-YMGNNALSALPAELGKLSKLGTLDLHSNQL-KEYCVEACQLR-LSV 118
           P SI  C +L     + NN    +P ++G L+ L  L L+SN +     V   +L  L  
Sbjct: 138 PKSICNCTALLGLGIIFNNLTGTIPTDIGNLANLQILVLYSNNIIGPIPVSIGKLGDLQS 197

Query: 119 LDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL----KYLRSRLP 173
           LDLS N LSG +PPEIG ++ L  L L  N L        +G  P+ L    K +   L 
Sbjct: 198 LDLSINQLSGVMPPEIGNLSNLEYLQLFENHL--------SGKIPSELGQCKKLIYLNLY 249

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS-IQ 232
            N+ +    ++   +     L +    L+      S IPS +++   +T L +S N  I 
Sbjct: 250 SNQFTGGIPSELGNLVQLVALKLYKNRLN------STIPSSLFQLKYLTHLGISENELIG 303

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPM 291
            +P EL S  SLQ L L  NK      A +T+L++L+ L +  N L  ++PS+    +  
Sbjct: 304 TIPSELGSLRSLQVLTLHSNKFTGKIPAQITNLTNLTILSMSFNFLTGELPSN-IGSLHN 362

Query: 292 LQILDLSYNI--ASLPENPPFSSLPHLQELYL-RRMQLREAPTDILRLQQLRILDLSQNS 348
           L+ L +  N+   S+P +   ++  HL  + L   M   E P  + +L  L  L L  N 
Sbjct: 363 LKNLTVHNNLLEGSIPSS--ITNCTHLVNIGLAYNMITGEIPQGLGQLPNLTFLGLGVNK 420

Query: 349 LQS-IPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGNPL 396
           +   IP+   N ++L  LDL+ NN S  L P +G L  +LQ L+   N L
Sbjct: 421 MSGNIPDDLFNCSNLAILDLARNNFSGVLKPGIGKLY-NLQRLQAHKNSL 469



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 184/419 (43%), Gaps = 56/419 (13%)

Query: 11  LTVLSNNLIASWTM-------LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-I 61
           L + SNN+I    +       L  L  S N L+G MP  IG+LS L  L L +N +   I
Sbjct: 174 LVLYSNNIIGPIPVSIGKLGDLQSLDLSINQLSGVMPPEIGNLSNLEYLQLFENHLSGKI 233

Query: 62  PSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEA-CQLR-LSV 118
           PS +  C  L    + +N  +  +P+ELG L +L  L L+ N+L      +  QL+ L+ 
Sbjct: 234 PSELGQCKKLIYLNLYSNQFTGGIPSELGNLVQLVALKLYKNRLNSTIPSSLFQLKYLTH 293

Query: 119 LDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL------------ 165
           L +S N L G +P E+G + +L+ L        TL S+   G  PA +            
Sbjct: 294 LGISENELIGTIPSELGSLRSLQVL--------TLHSNKFTGKIPAQITNLTNLTILSMS 345

Query: 166 -KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
             +L   LP N  S  +      +T+   L        LEG    +IPS I     +  +
Sbjct: 346 FNFLTGELPSNIGSLHNLKN---LTVHNNL--------LEG----SIPSSITNCTHLVNI 390

Query: 225 DLSRNSIQ-ELPPELSSCASLQTLILSRNKIK-DWPDAILTSLSSLSCLKLDNNPLRQVP 282
            L+ N I  E+P  L    +L  L L  NK+  + PD +    S+L+ L L  N    V 
Sbjct: 391 GLAYNMITGEIPQGLGQLPNLTFLGLGVNKMSGNIPDDLFNC-SNLAILDLARNNFSGVL 449

Query: 283 SDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRI 341
             G   +  LQ L    N    P  P   +L  L  L L    L    P ++ +L  L+ 
Sbjct: 450 KPGIGKLYNLQRLQAHKNSLVGPIPPEIGNLTQLFSLQLNGNSLSGTVPPELSKLSLLQG 509

Query: 342 LDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGNPLRS 398
           L L  N+L+ +IPE    L  L+EL L DN  +  +P  +  LE SL  L L+GN L  
Sbjct: 510 LYLDDNALEGAIPEEIFELKHLSELGLGDNRFAGHIPHAVSKLE-SLLNLYLNGNVLNG 567



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 117/284 (41%), Gaps = 40/284 (14%)

Query: 116 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           L VLDLS+NS +G +PP++G  + L +L L  N L        +G  P  L  LR+    
Sbjct: 75  LQVLDLSSNSFTGHIPPQLGLCSQLLELNLFQNSL--------SGSIPPELGNLRN---- 122

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-E 233
                              L + S    LEG    +IP  I     +  L +  N++   
Sbjct: 123 ----------------LQSLDLGSN--FLEG----SIPKSICNCTALLGLGIIFNNLTGT 160

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           +P ++ + A+LQ L+L  N I       +  L  L  L L  N L  V      ++  L+
Sbjct: 161 IPTDIGNLANLQILVLYSNNIIGPIPVSIGKLGDLQSLDLSINQLSGVMPPEIGNLSNLE 220

Query: 294 ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQS- 351
            L L  N  S            L  L L   Q     P+++  L QL  L L +N L S 
Sbjct: 221 YLQLFENHLSGKIPSELGQCKKLIYLNLYSNQFTGGIPSELGNLVQLVALKLYKNRLNST 280

Query: 352 IPEGFKNLTSLTELDLSDNN-ISALPPELGLLEPSLQALRLDGN 394
           IP     L  LT L +S+N  I  +P ELG L  SLQ L L  N
Sbjct: 281 IPSSLFQLKYLTHLGISENELIGTIPSELGSLR-SLQVLTLHSN 323


>gi|344270739|ref|XP_003407201.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Loxodonta africana]
          Length = 865

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 181/390 (46%), Gaps = 31/390 (7%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           +KN L  +PETI +L  L  L L  N++   P ++     L    +  N + +LP E+ +
Sbjct: 272 AKNKLKHIPETIYNLKNLRILSLEYNQLTIFPKALCFLPKLISLNLNGNLIRSLPKEIEE 331

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L +L L  N L    VE  QL ++  L L+NN L  +  +IG    LR L L  N L
Sbjct: 332 LKNLESLSLDHNNLTFLAVEIFQLLKMKELHLANNKLEVISYKIGNFKELRILTLDKNLL 391

Query: 150 RTLR----------------SSLVNGPTPAL-LKYLRSRLPENEDSEASTTKEDLITMAT 192
           + +                 + LV  P     LK LR+ L  N +S    T ED+  +  
Sbjct: 392 KEVSEKISHCIMLECLSLNDNELVELPKNIHKLKNLRT-LHVNRNSILKIT-EDISHLNN 449

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
             S     L   G  ++ +P EI    ++TK++LS N I   P  L +  SL  LI + N
Sbjct: 450 LCS-----LEFSGNVITDVPIEIKNCRKMTKVNLSYNKIMYFPVGLCALDSLYYLIFNGN 504

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
            I + P  I  S   L  L+ + N L  + S+    +  L+ L+L  N I+ +P  P  S
Sbjct: 505 YISEIPVDISFS-KQLLHLEFNENKL-HLFSEHLCSLINLEYLNLGKNQISKIP--PFIS 560

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           ++  L  L L   +    PT++  L+ L++LDLS+N +Q+IP    NL  + +L+ S N 
Sbjct: 561 NMVSLHVLILCHNKFETFPTELCALENLQVLDLSENQMQTIPSDICNLKGIQKLNFSSNQ 620

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSIRR 401
               P EL  L+ SL+ L +     R + R
Sbjct: 621 FVCFPIELCHLQ-SLEELNISQINGRKLTR 649



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 175/404 (43%), Gaps = 24/404 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L ++ N LT L+  +     M  EL  + N L  +   IG+   L  L L +N +  
Sbjct: 335 LESLSLDHNNLTFLAVEIFQLLKM-KELHLANNKLEVISYKIGNFKELRILTLDKNLLKE 393

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +   IS C  L    + +N L  LP  + KL  L TL ++ N + +   +   L  L  L
Sbjct: 394 VSEKISHCIMLECLSLNDNELVELPKNIHKLKNLRTLHVNRNSILKITEDISHLNNLCSL 453

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + S N ++ +P EI     + K+ L+ N +      L    +   L +  + + E     
Sbjct: 454 EFSGNVITDVPIEIKNCRKMTKVNLSYNKIMYFPVGLCALDSLYYLIFNGNYISE----- 508

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                   I +    S     L      L      +     +  L+L +N I ++PP +S
Sbjct: 509 --------IPVDISFSKQLLHLEFNENKLHLFSEHLCSLINLEYLNLGKNQISKIPPFIS 560

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  SL  LIL  NK + +P   L +L +L  L L  N ++ +PSD   ++  +Q L+ S 
Sbjct: 561 NMVSLHVLILCHNKFETFPTE-LCALENLQVLDLSENQMQTIPSD-ICNLKGIQKLNFSS 618

Query: 300 N-IASLPENPPFSSLPHLQELYLRRM---QLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           N     P       L  L+EL + ++   +L   P ++  + QL+ LD+S N+++ IP  
Sbjct: 619 NQFVCFP--IELCHLQSLEELNISQINGRKLTRLPEELFNMIQLKELDISNNAIREIPRN 676

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
                 L  L+  +N IS LPP    L   LQ L L GN L ++
Sbjct: 677 VGESRCLVSLNACNNQISCLPPSFLFLN-DLQQLNLSGNNLTAL 719



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 163/359 (45%), Gaps = 26/359 (7%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+   ML  L  + N L  +P+ I  L  L  L +++N IL I   IS   +L       
Sbjct: 398 ISHCIMLECLSLNDNELVELPKNIHKLKNLRTLHVNRNSILKITEDISHLNNLCSLEFSG 457

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++ +P E+    K+  ++L  N++  + V  C L  L  L  + N +S +P +I    
Sbjct: 458 NVITDVPIEIKNCRKMTKVNLSYNKIMYFPVGLCALDSLYYLIFNGNYISEIPVDISFSK 517

Query: 138 TLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            L  L    N L        SL+N      L+YL   L +N+ S+      +++++   +
Sbjct: 518 QLLHLEFNENKLHLFSEHLCSLIN------LEYLN--LGKNQISKIPPFISNMVSLHVLI 569

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
              +K            P+E+     +  LDLS N +Q +P ++ +   +Q L  S N+ 
Sbjct: 570 LCHNK--------FETFPTELCALENLQVLDLSENQMQTIPSDICNLKGIQKLNFSSNQF 621

Query: 255 KDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
             +P  +  L SL  L+  +++   L ++P + F  I  L+ LD+S N I  +P N   S
Sbjct: 622 VCFPIELCHLQSLEELNISQINGRKLTRLPEELFNMI-QLKELDISNNAIREIPRNVGES 680

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
               L  L     Q+   P   L L  L+ L+LS N+L ++P G  NL SL E++  DN
Sbjct: 681 RC--LVSLNACNNQISCLPPSFLFLNDLQQLNLSGNNLTALPSGIYNLFSLKEINFDDN 737



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 169/394 (42%), Gaps = 45/394 (11%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           +N ++ +P  I  LS L  L++  N+I  IP  IS   ++ + +  NN + + P  L  L
Sbjct: 204 ENKISSLPSEIPVLSNLRILNVSHNQISHIPKEISQLGNIRQLFFNNNYIESFPPGLENL 263

Query: 92  SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
             L  L+L  N+LK        L+ L +L L  N L+  P  +  +  L  L L GN +R
Sbjct: 264 GNLEILNLAKNKLKHIPETIYNLKNLRILSLEYNQLTIFPKALCFLPKLISLNLNGNLIR 323

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKELSLEGMNL 208
           +L   +        LK L S          S    +L  +A  +   +  KEL L    L
Sbjct: 324 SLPKEIEE------LKNLES---------LSLDHNNLTFLAVEIFQLLKMKELHLANNKL 368

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI------- 261
             I  +I    E+  L L +N ++E+  ++S C  L+ L L+ N++ + P  I       
Sbjct: 369 EVISYKIGNFKELRILTLDKNLLKEVSEKISHCIMLECLSLNDNELVELPKNIHKLKNLR 428

Query: 262 ---------------LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
                          ++ L++L  L+   N +  VP +  K+   +  ++LSYN I   P
Sbjct: 429 TLHVNRNSILKITEDISHLNNLCSLEFSGNVITDVPIE-IKNCRKMTKVNLSYNKIMYFP 487

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
                 +L  L  L      + E P DI   +QL  L+ ++N L    E   +L +L  L
Sbjct: 488 --VGLCALDSLYYLIFNGNYISEIPVDISFSKQLLHLEFNENKLHLFSEHLCSLINLEYL 545

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           +L  N IS +PP +  +  SL  L L  N   + 
Sbjct: 546 NLGKNQISKIPPFISNM-VSLHVLILCHNKFETF 578



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 168/367 (45%), Gaps = 20/367 (5%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L   P  I  +  +  L L +N+I +     S    L    +  N +S+LP+E+  LS L
Sbjct: 161 LQEFPNDILKVKYVKYLYLDKNQIKTFQVDSSDLLGLEILSLKENKISSLPSEIPVLSNL 220

Query: 95  GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L++  NQ+     E  QL  +  L  +NN +   PP +  +  L  L L  N L+ + 
Sbjct: 221 RILNVSHNQISHIPKEISQLGNIRQLFFNNNYIESFPPGLENLGNLEILNLAKNKLKHIP 280

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
            ++ N      LK L  R+   E ++ +   + L  +   +S     L+L G  + ++P 
Sbjct: 281 ETIYN------LKNL--RILSLEYNQLTIFPKALCFLPKLIS-----LNLNGNLIRSLPK 327

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           EI E   +  L L  N++  L  E+     ++ L L+ NK++     I  +   L  L L
Sbjct: 328 EIEELKNLESLSLDHNNLTFLAVEIFQLLKMKELHLANNKLEVISYKI-GNFKELRILTL 386

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
           D N L++V S+      ML+ L L+ N +  LP+N     L +L+ L++ R  + +   D
Sbjct: 387 DKNLLKEV-SEKISHCIMLECLSLNDNELVELPKN--IHKLKNLRTLHVNRNSILKITED 443

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
           I  L  L  L+ S N +  +P   KN   +T+++LS N I   P  L  L+ SL  L  +
Sbjct: 444 ISHLNNLCSLEFSGNVITDVPIEIKNCRKMTKVNLSYNKIMYFPVGLCALD-SLYYLIFN 502

Query: 393 GNPLRSI 399
           GN +  I
Sbjct: 503 GNYISEI 509



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 113/265 (42%), Gaps = 35/265 (13%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+    L  L  ++N L+   E + SL  L  L+L +N+I  IP  IS   SL    + +
Sbjct: 513 ISFSKQLLHLEFNENKLHLFSEHLCSLINLEYLNLGKNQISKIPPFISNMVSLHVLILCH 572

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N     P EL  L  L  LDL  NQ++    + C L+ +  L+ S+N     P E+  + 
Sbjct: 573 NKFETFPTELCALENLQVLDLSENQMQTIPSDICNLKGIQKLNFSSNQFVCFPIELCHLQ 632

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +L +L +          S +NG          +RLP           E+L  M     + 
Sbjct: 633 SLEELNI----------SQINGRK-------LTRLP-----------EELFNM-----IQ 659

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            KEL +    +  IP  + E+  +  L+   N I  LPP       LQ L LS N +   
Sbjct: 660 LKELDISNNAIREIPRNVGESRCLVSLNACNNQISCLPPSFLFLNDLQQLNLSGNNLTAL 719

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P  I  +L SL  +  D+NPL + P
Sbjct: 720 PSGIY-NLFSLKEINFDDNPLLRPP 743



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 12/200 (6%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           ++LE  +L   P++I +   +  L L +N I+    + S    L+ L L  NKI   P  
Sbjct: 154 VNLEAKDLQEFPNDILKVKYVKYLYLDKNQIKTFQVDSSDLLGLEILSLKENKISSLPSE 213

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML-QILDLSYN---IASLPENPPFSSLPHL 316
           I   LS+L  L + +N +  +P    K+I  L  I  L +N   I S P  P   +L +L
Sbjct: 214 I-PVLSNLRILNVSHNQISHIP----KEISQLGNIRQLFFNNNYIESFP--PGLENLGNL 266

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           + L L + +L+  P  I  L+ LRIL L  N L   P+    L  L  L+L+ N I +LP
Sbjct: 267 EILNLAKNKLKHIPETIYNLKNLRILSLEYNQLTIFPKALCFLPKLISLNLNGNLIRSLP 326

Query: 377 PELGLLEPSLQALRLDGNPL 396
            E+  L+ +L++L LD N L
Sbjct: 327 KEIEELK-NLESLSLDHNNL 345



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 100/185 (54%), Gaps = 14/185 (7%)

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP-DAILTSLSSLSCLKLDNNPLRQVP 282
           ++L    +QE P ++     ++ L L +N+IK +  D+  + L  L  L L  N +  +P
Sbjct: 154 VNLEAKDLQEFPNDILKVKYVKYLYLDKNQIKTFQVDS--SDLLGLEILSLKENKISSLP 211

Query: 283 SDGFKDIPML---QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
           S+    IP+L   +IL++S+N I+ +P+    S L ++++L+     +   P  +  L  
Sbjct: 212 SE----IPVLSNLRILNVSHNQISHIPK--EISQLGNIRQLFFNNNYIESFPPGLENLGN 265

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L IL+L++N L+ IPE   NL +L  L L  N ++  P  L  L P L +L L+GN +RS
Sbjct: 266 LEILNLAKNKLKHIPETIYNLKNLRILSLEYNQLTIFPKALCFL-PKLISLNLNGNLIRS 324

Query: 399 IRRTI 403
           + + I
Sbjct: 325 LPKEI 329


>gi|440796624|gb|ELR17733.1| Fbox domain containing protein [Acanthamoeba castellanii str. Neff]
          Length = 1783

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 201/450 (44%), Gaps = 59/450 (13%)

Query: 2    SKLDVEGNKLTVLSNN-----LIASWT-MLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 55
            + +D E N+L  L  N     L   WT  +T L  ++N L  +P  +   + LI LDL  
Sbjct: 983  TTVDPEDNELAALGLNRPTRRLYRHWTRTMTYLWMNENSLTALPPPVLLFTNLIELDLKH 1042

Query: 56   NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL- 114
            NR+ S+P +IS   +L    +  N L +LP ELG+L+ L +L L  N+L        +L 
Sbjct: 1043 NRLTSLPPAISRLQNLVWLNLDENKLESLPDELGQLTNLTSLFLSYNRLTSLPDTMSRLT 1102

Query: 115  RLSVLDLSNNSLSGLPPE-IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---- 169
             L+ + L+ N L  LP         LR+L    NP+    +  V+     L    +    
Sbjct: 1103 ALTGVGLNANQLRSLPDTWFANARNLRELYFWRNPMLGSLAPNVDAGMAGLTALSKLNVH 1162

Query: 170  ----SRLPENE------------DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
                  LP +              ++ +    +L    T L+     L L   +L  +P 
Sbjct: 1163 SCGLGTLPHSLTLLTDLTYLELGGNKLAEVDPNLFVQLTNLN----SLWLYTNSLKVLPP 1218

Query: 214  EIWEAGEITKLDLS-----------------------RNSIQELPPELSSCASLQTLILS 250
            EI     +T+L +S                       RNS+Q LP EL    +L+ ++L 
Sbjct: 1219 EIEHLQSLTELHMSVNQLRELPKELGKLTNLTHLDLSRNSLQSLPEELGELTNLRQILLH 1278

Query: 251  RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPP 309
            RN++K +P   +T L SL  L LD N +  +P +    +  L +LDL+ N I       P
Sbjct: 1279 RNRLKQFP-LFVTKLVSLERLDLDTNAITHLP-ESLSQLTNLVLLDLNRNRITEAAALRP 1336

Query: 310  FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
              +L  LQ L++    L   P +I RL QL  L+L +N L ++P     LT+L  +    
Sbjct: 1337 ACALTSLQALFVGMNGLTALPDEIGRLTQLESLNLIENRLTALPPALGQLTALKYVYACY 1396

Query: 370  NNISALPPELGLLEPSLQALRLDGNPLRSI 399
            N ++++P ELG L  +LQ+L L  N LR++
Sbjct: 1397 NRLTSVPDELGGLT-NLQSLDLSHNELRAV 1425



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 182/406 (44%), Gaps = 48/406 (11%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
            +++L +  N+L  L   L    T LT L  S+N L  +PE +G L+ L ++ LH+NR+  
Sbjct: 1226 LTELHMSVNQLRELPKEL-GKLTNLTHLDLSRNSLQSLPEELGELTNLRQILLHRNRLKQ 1284

Query: 61   IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV--EACQL-RLS 117
             P  ++   SL    +  NA++ LP  L +L+ L  LDL+ N++ E      AC L  L 
Sbjct: 1285 FPLFVTKLVSLERLDLDTNAITHLPESLSQLTNLVLLDLNRNRITEAAALRPACALTSLQ 1344

Query: 118  VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS---RLPE 174
             L +  N L+ LP EIG++T L  L L  N L  L  +L  G   AL KY+ +   RL  
Sbjct: 1345 ALFVGMNGLTALPDEIGRLTQLESLNLIENRLTALPPAL--GQLTAL-KYVYACYNRL-- 1399

Query: 175  NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
                   T+  D +   T L    + L L    L A+  ++     +    + +N +  +
Sbjct: 1400 -------TSVPDELGGLTNL----QSLDLSHNELRAV-FDVRRLARLEVFSVYKNCLSRV 1447

Query: 235  PPELSSCASLQTLILSRNKIKDWPDAILTSLS------------------SLSCLKLDNN 276
            PP L    SL+ L L  N     P   ++ LS                  SL  L +  N
Sbjct: 1448 PPGLGQLTSLKRLWLGINAFHTEPPPPMSELSTVAAATTTESIDEVAELRSLRVLNMRGN 1507

Query: 277  PLRQVPSDGFKDIPMLQILDLSYNIASLPENPP---FSSLPHLQELYLRRMQLREA-PTD 332
             +  VP +    +  L +L L  N  + P   P   + SL  L+ L+L    L+E  P +
Sbjct: 1508 DIHSVP-EALSRLTNLDVLSLWRNKLTGPRAIPSSVWQSLTGLRHLHLGENNLQEELPEE 1566

Query: 333  ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI-SALPP 377
            I  L  LR L L +N + S+P     LT L  L++S N    ALPP
Sbjct: 1567 IGALTNLRALHLEKNGISSLPASLSRLTRLGHLNISANRFEGALPP 1612



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 190/442 (42%), Gaps = 91/442 (20%)

Query: 8    GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
            GNKL  +  NL    T L  L    N L  +P  I  L  L  L +  N++  +P  +  
Sbjct: 1186 GNKLAEVDPNLFVQLTNLNSLWLYTNSLKVLPPEIEHLQSLTELHMSVNQLRELPKELGK 1245

Query: 68   CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 126
              +L    +  N+L +LP ELG+L+ L  + LH N+LK++ +   +L  L  LDL  N++
Sbjct: 1246 LTNLTHLDLSRNSLQSLPEELGELTNLRQILLHRNRLKQFPLFVTKLVSLERLDLDTNAI 1305

Query: 127  SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 186
            + LP  + ++T L                        LL   R+R+     +EA+  +  
Sbjct: 1306 THLPESLSQLTNL-----------------------VLLDLNRNRI-----TEAAALR-- 1335

Query: 187  LITMATRLSVTSKELSLEGMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 245
                    ++TS +    GMN L+A+P EI    ++  L+L  N +  LPP L    +L+
Sbjct: 1336 -----PACALTSLQALFVGMNGLTALPDEIGRLTQLESLNLIENRLTALPPALGQLTALK 1390

Query: 246  TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASL 304
             +    N++   PD  L  L++L  L L +N LR V     + +  L++  +  N ++ +
Sbjct: 1391 YVYACYNRLTSVPDE-LGGLTNLQSLDLSHNELRAVFD--VRRLARLEVFSVYKNCLSRV 1447

Query: 305  PENPPFSSLPHLQELYLRRMQLREAP-------------------TDILRLQQLRILDLS 345
            P  P    L  L+ L+L        P                    ++  L+ LR+L++ 
Sbjct: 1448 P--PGLGQLTSLKRLWLGINAFHTEPPPPMSELSTVAAATTTESIDEVAELRSLRVLNMR 1505

Query: 346  QNSLQSIPEG---------------------------FKNLTSLTELDLSDNNIS-ALPP 377
             N + S+PE                            +++LT L  L L +NN+   LP 
Sbjct: 1506 GNDIHSVPEALSRLTNLDVLSLWRNKLTGPRAIPSSVWQSLTGLRHLHLGENNLQEELPE 1565

Query: 378  ELGLLEPSLQALRLDGNPLRSI 399
            E+G L  +L+AL L+ N + S+
Sbjct: 1566 EIGALT-NLRALHLEKNGISSL 1586



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 160/347 (46%), Gaps = 41/347 (11%)

Query: 23   TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
            T L  L    N L  +P+ IG L++L  L+L +NR+ ++P ++    +L   Y   N L+
Sbjct: 1341 TSLQALFVGMNGLTALPDEIGRLTQLESLNLIENRLTALPPALGQLTALKYVYACYNRLT 1400

Query: 83   ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 142
            ++P ELG L+ L +LDL  N+L+         RL V  +  N LS +PP +G++T+L++L
Sbjct: 1401 SVPDELGGLTNLQSLDLSHNELRAVFDVRRLARLEVFSVYKNCLSRVPPGLGQLTSLKRL 1460

Query: 143  LLTGN--------PLRTLRSSLVNGPTPAL--LKYLRSRLPENEDSEASTTKEDLITMAT 192
             L  N        P+  L +      T ++  +  LRS    N       +  + ++  T
Sbjct: 1461 WLGINAFHTEPPPPMSELSTVAAATTTESIDEVAELRSLRVLNMRGNDIHSVPEALSRLT 1520

Query: 193  RLSVTSKELSLEGMNLS---AIPSEIWEA-GEITKLDLSRNSIQE-LPPELSSCASLQTL 247
             L V    LSL    L+   AIPS +W++   +  L L  N++QE LP E+ +  +L+ L
Sbjct: 1521 NLDV----LSLWRNKLTGPRAIPSSVWQSLTGLRHLHLGENNLQEELPEEIGALTNLRAL 1576

Query: 248  ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 307
             L +N I   P A L+ L+ L  L +  N            I  L  LD++ N       
Sbjct: 1577 HLEKNGISSLP-ASLSRLTRLGHLNISANRFEGALPPIVLAITSLTTLDIACN------- 1628

Query: 308  PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
                          R  +L +      RL +LR+L+   N L+++P+
Sbjct: 1629 --------------RFTRLCDDDQAFGRLTKLRVLNAGNNRLEALPD 1661



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 9/135 (6%)

Query: 22   WTMLTEL----IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
            W  LT L    +   NL   +PE IG+L+ L  L L +N I S+P+S+S    L    + 
Sbjct: 1543 WQSLTGLRHLHLGENNLQEELPEEIGALTNLRALHLEKNGISSLPASLSRLTRLGHLNIS 1602

Query: 78   NNAL-SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPE 132
             N    ALP  +  ++ L TLD+  N+    C +        +L VL+  NN L  LP E
Sbjct: 1603 ANRFEGALPPIVLAITSLTTLDIACNRFTRLCDDDQAFGRLTKLRVLNAGNNRLEALPDE 1662

Query: 133  IGKMTTLRKLLLTGN 147
            + ++  +R + + GN
Sbjct: 1663 LWRLPRVRCVQIKGN 1677


>gi|410684754|ref|YP_006060761.1| leucine-rich repeat protein type III effector protein [Ralstonia
           solanacearum CMR15]
 gi|299069243|emb|CBJ40503.1| leucine-rich repeat protein type III effector protein [Ralstonia
           solanacearum CMR15]
          Length = 754

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 128/410 (31%), Positives = 186/410 (45%), Gaps = 41/410 (10%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           LN +P  +G L RL  L L    I ++P  + G  +L E  + N  L+ALP +LG L KL
Sbjct: 95  LNALPHAVGQLPRLQELRLVDTGIQALPP-MGGASALKEITVSNAPLAALPDDLGALRKL 153

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNN-SLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
             L L   QL+E       L  L  L L +N  LSGLPP +  ++ L  L L GN +R L
Sbjct: 154 AHLSLSGTQLRELPASTGYLSALQTLSLRDNKKLSGLPPSLSNLSGLESLTLAGNHIREL 213

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTK--EDLITMATRLSVTSKELSLEGMNLSA 210
                    P++ K     L E    E S  K   D     T   +    LSL    L  
Sbjct: 214 ---------PSMSKA--HALQELTVDEPSLAKLPPDFGAGGTLGKLA--HLSLSNTKLRE 260

Query: 211 IPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
           +P+ +     +  L L  N  ++ LPP       L+ L L  N IK  P   ++ +S+L 
Sbjct: 261 LPANLGNLSGLKTLTLQGNQKLEALPPSFGQLTGLEMLSLVGNHIKSLPP--MSGVSALK 318

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFSSLPHLQELYLR-RMQLR 327
            LK+D+  L  +P D       L  L LS   +++LP +     L HLQEL L    QLR
Sbjct: 319 KLKIDDASLASLPRDFGAQHKALTNLSLSNTQLSTLPSS--IEKLSHLQELKLNDNTQLR 376

Query: 328 EAPTDILRLQQLRILDLSQ-NSLQSIPEGFKNLTSLTELDL---SDNNISALP-----PE 378
             P  + ++++L+ LDLS    L+S+P+    +++L ELDL   +   I+ALP     P 
Sbjct: 377 TLPDSLTKMKRLQKLDLSGCKRLESLPQSIGKISTLQELDLLNCTRLTIAALPYSVRFPR 436

Query: 379 LGL-------LEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
            GL       L+  +   RL  NP   +    L+R  + +   + D  P+
Sbjct: 437 DGLRVRLPDHLKAEVYGERLKANPRAQVLLGDLERKGEQMDDAIFDSRPQ 486


>gi|456824980|gb|EMF73376.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 426

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 151/317 (47%), Gaps = 18/317 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  SKN L  +PE IG L  L +L L++N++ +IP  I    +L E  + +
Sbjct: 91  IGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAH 150

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP ++ +L +L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++ 
Sbjct: 151 NQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLR 210

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR----LPENEDSEASTTKEDLITMATR 193
            L  L L  N L  L   +       +L +LR+     LP+      +  K  L      
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQIL-HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLT 269

Query: 194 LSVTS-------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
                       ++L L    L+ +P EI +   + +LDL  N +  LP  +     LQT
Sbjct: 270 TLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQT 329

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           L L  N++   P+ +   L +L  L L++N L  +P +    +  LQ L+L YN +A+LP
Sbjct: 330 LYLGNNQLNFLPNKV-EQLQNLESLDLEHNQLNALPKE-IGKLQKLQTLNLKYNQLATLP 387

Query: 306 ENPPFSSLPHLQELYLR 322
           E      L +L++LYL 
Sbjct: 388 E--EIKQLKNLKKLYLH 402



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 158/364 (43%), Gaps = 64/364 (17%)

Query: 59  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 117
           +++P  I    +L + ++  N L ALP E+G+L  L  L L+ NQL     E  QL+ L 
Sbjct: 85  IALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQ 144

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            L+L++N L+ LP +I ++  L+ L L  N   ++   +        L+ L S       
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEI------GQLQNLES------- 191

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                                  L L+   L+ +P EI +   +  L L  N +  LP E
Sbjct: 192 -----------------------LGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 228

Query: 238 LSSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDN 275
           +    +LQ L L  N++   P  I                      +  L +L  LKL  
Sbjct: 229 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE 288

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N L  +P +    +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P  + 
Sbjct: 289 NQLTTLPKE-IGQLQNLQELDLDGNQLITLPEN--IGQLQRLQTLYLGNNQLNFLPNKVE 345

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           +LQ L  LDL  N L ++P+    L  L  L+L  N ++ LP E+  L+ +L+ L L  N
Sbjct: 346 QLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK-NLKKLYLHNN 404

Query: 395 PLRS 398
           PL S
Sbjct: 405 PLPS 408



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 1/132 (0%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L   +N L  +P+ IG L  L  LDL  N+++++P +I     L   Y+GN
Sbjct: 275 IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGN 334

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP ++ +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++ 
Sbjct: 335 NQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK 394

Query: 138 TLRKLLLTGNPL 149
            L+KL L  NPL
Sbjct: 395 NLKKLYLHNNPL 406



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 1/102 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD++GN+L  L  N I     L  L    N LN +P  +  L  L  LDL  N++ +
Sbjct: 304 LQELDLDGNQLITLPEN-IGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNA 362

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 102
           +P  I     L    +  N L+ LP E+ +L  L  L LH+N
Sbjct: 363 LPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404


>gi|45656982|ref|YP_001068.1| hypothetical protein LIC11098 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421087184|ref|ZP_15548025.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421104950|ref|ZP_15565543.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45600219|gb|AAS69705.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410365260|gb|EKP20655.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410430293|gb|EKP74663.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|456983450|gb|EMG19759.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 426

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 150/317 (47%), Gaps = 18/317 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  SKN L  +PE IG L  L +L L++N++ +IP  I    +L E  + +
Sbjct: 91  IGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAH 150

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP ++ +L +L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++ 
Sbjct: 151 NQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLR 210

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR----LPENEDSEASTTKEDLITMATR 193
            L  L L  N L  L   +       +L +LR+     LP+      +  K  L      
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQIL-HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLT 269

Query: 194 LSVTS-------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
                       ++L L    L+ +P EI +   + +LDL  N +  LP  +     LQT
Sbjct: 270 TLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQT 329

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           L L  N++   P  I   L +L  L L++N L  +P +    +  LQ L+L YN +A+LP
Sbjct: 330 LYLGNNQLNFLPKEI-GQLRNLESLDLEHNQLNALPKE-IGKLQKLQTLNLKYNQLATLP 387

Query: 306 ENPPFSSLPHLQELYLR 322
           E      L +L++LYL 
Sbjct: 388 E--EIKQLKNLKKLYLH 402



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 159/364 (43%), Gaps = 64/364 (17%)

Query: 59  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 117
           +++P  I    +L + ++  N L ALP E+G+L  L  L L+ NQL     E  QL+ L 
Sbjct: 85  IALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQ 144

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            L+L++N L+ LP +I ++  L+ L L  N   ++   +        L+ L S       
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEI------GQLQNLES------- 191

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                                  L L+   L+ +P EI +   +  L L  N +  LP E
Sbjct: 192 -----------------------LGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 228

Query: 238 LSSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDN 275
           +    +LQ L L  N++   P  I                      +  L +L  LKL  
Sbjct: 229 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYE 288

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N L  +P +    +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P +I 
Sbjct: 289 NQLTTLPKE-IGQLQNLQELDLDGNQLTTLPEN--IGQLQRLQTLYLGNNQLNFLPKEIG 345

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           +L+ L  LDL  N L ++P+    L  L  L+L  N ++ LP E+  L+ +L+ L L  N
Sbjct: 346 QLRNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK-NLKKLYLHNN 404

Query: 395 PLRS 398
           PL S
Sbjct: 405 PLPS 408



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 80/151 (52%), Gaps = 1/151 (0%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L   +N L  +P+ IG L  L  LDL  N++ ++P +I     L   Y+GN
Sbjct: 275 IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGN 334

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP E+G+L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++ 
Sbjct: 335 NQLNFLPKEIGQLRNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK 394

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
            L+KL L  NPL + + + +    P  + Y 
Sbjct: 395 NLKKLYLHNNPLPSEKIARIRKLLPQCIIYF 425



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 118/229 (51%), Gaps = 7/229 (3%)

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           + +EA T   + IT A +     + L+L G  L+ +P EI +   +  L+L  N +  LP
Sbjct: 30  QSNEAQTYYRN-ITEALKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALP 88

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
            E+    +LQ L LS+N++   P+ I   L +L  LKL  N L  +P +    +  LQ L
Sbjct: 89  KEIGKLQNLQQLHLSKNQLMALPEEI-GQLQNLQKLKLYENQLTAIPKE-IGQLQNLQEL 146

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
           +L++N +A+LPE+     L  LQ LYL   Q      +I +LQ L  L L  N L  +P+
Sbjct: 147 NLAHNQLATLPED--IEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK 204

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
               L +L  L L  N ++ LP E+G L+ +LQ L L  N L ++ + I
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQ-NLQILHLRNNQLTTLPKEI 252


>gi|418723960|ref|ZP_13282794.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409962758|gb|EKO26492.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 426

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 151/317 (47%), Gaps = 18/317 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  SKN L  +PE IG L  L +L L++N++ +IP  I    +L E  + +
Sbjct: 91  IGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAH 150

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP ++ +L +L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++ 
Sbjct: 151 NQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLR 210

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR----LPENEDSEASTTKEDLITMATR 193
            L  L L  N L  L   +       +L +LR+     LP+      +  K  L      
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQIL-HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLT 269

Query: 194 LSVTS-------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
                       ++L L    L+ +P EI +   + +LDL  N +  LP  +     LQT
Sbjct: 270 TLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQT 329

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           L L  N++   P+ +   L +L  L L++N L  +P +    +  LQ L+L YN +A+LP
Sbjct: 330 LYLGNNQLNFLPNKV-EQLQNLESLDLEHNQLNALPKE-IGKLQKLQTLNLKYNQLATLP 387

Query: 306 ENPPFSSLPHLQELYLR 322
           E      L +L++LYL 
Sbjct: 388 E--EIKQLKNLKKLYLH 402



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 158/364 (43%), Gaps = 64/364 (17%)

Query: 59  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 117
           +++P  I    +L + ++  N L ALP E+G+L  L  L L+ NQL     E  QL+ L 
Sbjct: 85  IALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQ 144

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            L+L++N L+ LP +I ++  L+ L L  N   ++   +        L+ L S       
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEI------GQLQNLES------- 191

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                                  L L+   L+ +P EI +   +  L L  N +  LP E
Sbjct: 192 -----------------------LGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 228

Query: 238 LSSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDN 275
           +    +LQ L L  N++   P  I                      +  L +L  LKL  
Sbjct: 229 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE 288

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N L  +P +    +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P  + 
Sbjct: 289 NQLTTLPKE-IGQLQNLQELDLDGNQLITLPEN--IGQLQRLQTLYLGNNQLNFLPNKVE 345

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           +LQ L  LDL  N L ++P+    L  L  L+L  N ++ LP E+  L+ +L+ L L  N
Sbjct: 346 QLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK-NLKKLYLHNN 404

Query: 395 PLRS 398
           PL S
Sbjct: 405 PLPS 408



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 1/151 (0%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L   +N L  +P+ IG L  L  LDL  N+++++P +I     L   Y+GN
Sbjct: 275 IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGN 334

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP ++ +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++ 
Sbjct: 335 NQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK 394

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
            L+KL L  NPL + + + +    P  + Y 
Sbjct: 395 NLKKLYLHNNPLPSEKIARIRKLLPQCIIYF 425


>gi|418666318|ref|ZP_13227747.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410757932|gb|EKR19533.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 313

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 146/314 (46%), Gaps = 40/314 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL+++GN+LT L    I     L  L  + N    +P+ IG L  L RLDL  N+  S
Sbjct: 19  LEKLNLDGNQLTSLPKE-IGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTS 77

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I     L    +  N  ++LP E+G+L  L  LDL  NQ      E  QL +L  L
Sbjct: 78  LPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTFLPKEIGQLQKLEAL 137

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L +N  +  P EI +  +L+ L L+G+ L+TL   ++      LL+ L+S         
Sbjct: 138 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL------LLQNLQS--------- 182

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                L L+G  L+++P EI +   + +L+L  N ++ LP E+ 
Sbjct: 183 ---------------------LHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIE 221

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +LQ+L L  N++   P  I   L +L  L L +N L+ +P +  + +  LQ+L L  
Sbjct: 222 QLQNLQSLHLDGNQLTSLPKEI-GQLQNLFELNLQDNKLKTLPKE-IEQLQNLQVLRLYS 279

Query: 300 NIASLPENPPFSSL 313
           N  SL E      L
Sbjct: 280 NSFSLKEKQKIQEL 293



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 150/324 (46%), Gaps = 49/324 (15%)

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 134
           MG + L +LP  +G    L  L+L  NQL     E  QL+ L VL+L+ N  + LP EIG
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
           ++  L +L L GN   +L                                   I    +L
Sbjct: 61  QLQNLERLDLDGNQFTSLPKE--------------------------------IGQLQKL 88

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
            V    L+L G   +++P EI +   + +LDL+ N    LP E+     L+ L L  N+ 
Sbjct: 89  RV----LNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTFLPKEIGQLQKLEALNLDHNRF 144

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY----NIASLPENPPF 310
             +P  I     SL  L+L  + L+ +P    K+I +LQ L   +     + SLP+    
Sbjct: 145 TIFPKEIRQQ-QSLKWLRLSGDQLKTLP----KEILLLQNLQSLHLDGNQLTSLPK--EI 197

Query: 311 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
             L +L EL L+  +L+  P +I +LQ L+ L L  N L S+P+    L +L EL+L DN
Sbjct: 198 GQLQNLFELNLQDNKLKTLPKEIEQLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDN 257

Query: 371 NISALPPELGLLEPSLQALRLDGN 394
            +  LP E+  L+ +LQ LRL  N
Sbjct: 258 KLKTLPKEIEQLQ-NLQVLRLYSN 280



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 137/316 (43%), Gaps = 40/316 (12%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  IG    L +L+L  N++ S+P  I    +L    +  N  ++LP E+G+L  L
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNL 65

Query: 95  GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDL  NQ      E  QL +L VL+L+ N  + LP EIG++  L +L L GN    L 
Sbjct: 66  ERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTFL- 124

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
                   P  +  L+     N D    T    +     R   + K L L G  L  +P 
Sbjct: 125 --------PKEIGQLQKLEALNLDHNRFT----IFPKEIRQQQSLKWLRLSGDQLKTLPK 172

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           EI     +  L L  N +  LP E+    +L  L L  NK+K  P  I   L +L  L L
Sbjct: 173 EILLLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEI-EQLQNLQSLHL 231

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
           D N L  +P    K+I  LQ                     +L EL L+  +L+  P +I
Sbjct: 232 DGNQLTSLP----KEIGQLQ---------------------NLFELNLQDNKLKTLPKEI 266

Query: 334 LRLQQLRILDLSQNSL 349
            +LQ L++L L  NS 
Sbjct: 267 EQLQNLQVLRLYSNSF 282



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 27/197 (13%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L ++P  I     + KL+L  N +  LP E+    +L+ L L+ N+    P  I   L +
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEI-GQLQN 64

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L  L LD N    +P +    +  L++L+L+ N         F+SLP             
Sbjct: 65  LERLDLDGNQFTSLPKE-IGQLQKLRVLNLAGN--------QFTSLP------------- 102

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
               +I +LQ L  LDL+ N    +P+    L  L  L+L  N  +  P E+   + SL+
Sbjct: 103 ---KEIGQLQNLERLDLAGNQFTFLPKEIGQLQKLEALNLDHNRFTIFPKEIRQ-QQSLK 158

Query: 388 ALRLDGNPLRSIRRTIL 404
            LRL G+ L+++ + IL
Sbjct: 159 WLRLSGDQLKTLPKEIL 175



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           + + SLP         +L++L L   QL   P +I +LQ LR+L+L+ N   S+P+    
Sbjct: 4   HELESLPR--VIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQ 61

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L +L  LDL  N  ++LP E+G L+  L+ L L GN   S+ + I
Sbjct: 62  LQNLERLDLDGNQFTSLPKEIGQLQ-KLRVLNLAGNQFTSLPKEI 105


>gi|355562779|gb|EHH19373.1| hypothetical protein EGK_20064 [Macaca mulatta]
          Length = 582

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 177/404 (43%), Gaps = 65/404 (16%)

Query: 49  IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 108
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G L  L TL L  N L    
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 109 VEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 167
                L+ L +LDL +N L  +P  + ++ +L  L L  N + T+   + N    ++L  
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS- 221

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
               + EN+  +      +L  + T        L +    L  +P EI    +IT LDL 
Sbjct: 222 ----IRENKIKQLPAEIGELCNLIT--------LDVAHNQLEHLPKEIGNCTQITNLDLQ 269

Query: 228 RNSIQELPPELSSCASLQTL---------------------------------------- 247
            N + +LP  + + +SL  L                                        
Sbjct: 270 HNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPXSLLSS 329

Query: 248 -------ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
                   L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++  N
Sbjct: 330 LVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDN 389

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G  NL
Sbjct: 390 QLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNL 447

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 448 RKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 490



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 194/432 (44%), Gaps = 65/432 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMG-----------------------NNALSALPAELGKLSKLGTL 97
           IPS +    SL   Y+                         N +  LPAE+G+L  L TL
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 98  DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           D+  NQL+    E     +++ LDL +N L  LP  IG +++L +L L  N L  +  SL
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSL 303

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV------------TSKELSLE 204
                   L    + +     S  S+  +       R               T   L++E
Sbjct: 304 SKCSALEELNLENNNISTLPXSLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNME 363

Query: 205 GMNLSAIPSEIWEAGEI-TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
              ++ IP  I+   ++ +KL++  N +  LP +  +  S+  L L+ N++   P+ + +
Sbjct: 364 HNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-S 422

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            L SL  L L NN L+++P  G  ++  L+ LDL  N                       
Sbjct: 423 GLVSLEVLILSNNLLKKLP-HGLGNLRKLRELDLEEN----------------------- 458

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            +L   P +I  L+ L+ L L+ N L ++P G  +LT+LT L L +N ++ LP E+G LE
Sbjct: 459 -KLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLE 517

Query: 384 PSLQALRLDGNP 395
            +L+ L L+ NP
Sbjct: 518 -NLEELYLNDNP 528



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPRSL 303



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 147/338 (43%), Gaps = 73/338 (21%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFY------------------------MGNNALSALP-AELGKLSKLGTLD 98
           S+S C +L E                          +  N     P     + S + +L+
Sbjct: 302 SLSKCSALEELNLENNNISTLPXSLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 99  LHSNQLKE--YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           +  N++ +  + + +    LS L++ +N L+ LP + G  T++ +L L  N L       
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQL------- 414

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                        +++PE+     S    +++ ++  L             L  +P  + 
Sbjct: 415 -------------TKIPEDVSGLVSL---EVLILSNNL-------------LKKLPHGLG 445

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
              ++ +LDL  N ++ LP E++    LQ L+L+ N++   P  I   L++L+ L L  N
Sbjct: 446 NLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGEN 504

Query: 277 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 314
            L  +P    ++I  L+ L+  Y    L +NP   SLP
Sbjct: 505 LLTHLP----EEIGTLENLEELY----LNDNPNLHSLP 534


>gi|395735870|ref|XP_002815652.2| PREDICTED: protein LAP2 isoform 1 [Pongo abelii]
          Length = 1371

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 188/400 (47%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+A
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388


>gi|417760348|ref|ZP_12408374.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774427|ref|ZP_12422292.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418675361|ref|ZP_13236652.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943915|gb|EKN89506.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410575760|gb|EKQ38777.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410577523|gb|EKQ45393.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 412

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 151/317 (47%), Gaps = 18/317 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  SKN L  +PE IG L  L +L L++N++ +IP  I    +L E  + +
Sbjct: 77  IGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAH 136

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP ++ +L +L TL L  NQ      E  QL+ L  L L +N L+ LP EIG++ 
Sbjct: 137 NQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLR 196

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR----LPENEDSEASTTKEDLITMATR 193
            L  L L  N L  L   +       +L +LR+     LP+      +  K  L      
Sbjct: 197 NLESLGLDHNQLNVLPKEIGQLQNLQIL-HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLT 255

Query: 194 LSVTS-------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
                       ++L L    L+ +P EI +   + +LDL  N +  LP  +     LQT
Sbjct: 256 TLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQT 315

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           L L  N++   P+ +   L +L  L L++N L  +P +    +  LQ L+L YN +A+LP
Sbjct: 316 LYLGNNQLNFLPNKV-EQLQNLESLDLEHNQLNALPKE-IGKLQKLQTLNLKYNQLATLP 373

Query: 306 ENPPFSSLPHLQELYLR 322
           E      L +L++LYL 
Sbjct: 374 E--EIKQLKNLKKLYLH 388



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 158/364 (43%), Gaps = 64/364 (17%)

Query: 59  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 117
           +++P  I    +L + ++  N L ALP E+G+L  L  L L+ NQL     E  QL+ L 
Sbjct: 71  IALPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQ 130

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            L+L++N L+ LP +I ++  L+ L L  N   ++   +        L+ L S       
Sbjct: 131 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEI------GQLQNLES------- 177

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                                  L L+   L+ +P EI +   +  L L  N +  LP E
Sbjct: 178 -----------------------LGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKE 214

Query: 238 LSSCASLQTLILSRNKIKDWPDAI----------------------LTSLSSLSCLKLDN 275
           +    +LQ L L  N++   P  I                      +  L +L  LKL  
Sbjct: 215 IGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE 274

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N L  +P +    +  LQ LDL  N + +LPEN     L  LQ LYL   QL   P  + 
Sbjct: 275 NQLTTLPKE-IGQLQNLQELDLDGNQLITLPEN--IGQLQRLQTLYLGNNQLNFLPNKVE 331

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           +LQ L  LDL  N L ++P+    L  L  L+L  N ++ LP E+  L+ +L+ L L  N
Sbjct: 332 QLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK-NLKKLYLHNN 390

Query: 395 PLRS 398
           PL S
Sbjct: 391 PLPS 394



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 1/102 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD++GN+L  L  N I     L  L    N LN +P  +  L  L  LDL  N++ +
Sbjct: 290 LQELDLDGNQLITLPEN-IGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNA 348

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 102
           +P  I     L    +  N L+ LP E+ +L  L  L LH+N
Sbjct: 349 LPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 390


>gi|118103834|ref|XP_429138.2| PREDICTED: protein LAP2 [Gallus gallus]
          Length = 1410

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 191/411 (46%), Gaps = 64/411 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 72  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 131

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG------------- 128
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S              
Sbjct: 132 LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 190

Query: 129 ----------LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
                     LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +
Sbjct: 191 LYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKTMSR-----LTQLERLDLGSNEFT 245

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E     E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +
Sbjct: 246 EVPEVLEQLSGL--------KEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEIVEEGI 297

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           S C SLQ L+LS N ++  P+ I  SL  ++ LK+D N L  +P D    +  ++ LD S
Sbjct: 298 SGCESLQDLLLSSNSLQQLPETI-GSLKKVTTLKIDENQLIYLP-DSIGGLVSVEELDCS 355

Query: 299 YN-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRL 336
           +N I +LP +                     P   +  ++  L+L   +L   P ++  +
Sbjct: 356 FNEIETLPSSVGQLSNIRTFAADHNFLTQLPPEIGNWKYITVLFLHSNKLEFLPEEMGDM 415

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
           Q+L++++LS N L+++P  F  L  LT + LSDN    L P     +P  Q
Sbjct: 416 QKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDNQSKPLIPLQKEADPDTQ 466



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 129/283 (45%), Gaps = 49/283 (17%)

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
           KMTT R LL+   P R LR                              +E+ +T     
Sbjct: 48  KMTTKRNLLVRLVPCRCLRG-----------------------------EEETVTT---- 74

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
                 L     +L  +P EI+   + + +L L  N I+ELP +L +C SL  L L  N 
Sbjct: 75  ------LDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDND 128

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 312
           +   P A + +L +L  L +  N +++ P +  K+  +L +++ S N I+ LP+   FS 
Sbjct: 129 LTTLP-ASIANLINLRELDVSKNGIQEFP-ENIKNCKVLTVVEASVNPISKLPDG--FSQ 184

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L +L +LYL    L   P +  RL +L+IL+L +N L+ +P+    LT L  LDL  N  
Sbjct: 185 LLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKTMSRLTQLERLDLGSNEF 244

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           + +P  L  L   L+   +DGN L  I   I   GT   L YL
Sbjct: 245 TEVPEVLEQLS-GLKEFWMDGNRLTLIPGFI---GTLKQLTYL 283



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 2/153 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I+    L +L+ S N L  +PETIGSL ++  L + +N+++ 
Sbjct: 280 LTYLDVSKNNIEIVEEG-ISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLIY 338

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N +  LP+ +G+LS + T     N L +   E    + ++VL
Sbjct: 339 LPDSIGGLVSVEELDCSFNEIETLPSSVGQLSNIRTFAADHNFLTQLPPEIGNWKYITVL 398

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
            L +N L  LP E+G M  L+ + L+ N L+ L
Sbjct: 399 FLHSNKLEFLPEEMGDMQKLKVINLSDNRLKNL 431



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 40/257 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T +   ++   + L E     N L  +P  IG+L +L  LD+ +N I  
Sbjct: 234 LERLDLGSNEFTEVPE-VLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEI 292

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-- 118
           +   ISGC SL +  + +N+L  LP  +G L K+ TL +  NQL  Y  ++    +SV  
Sbjct: 293 VEEGISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLI-YLPDSIGGLVSVEE 351

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LD S N +  LP  +G+++ +R      N L  L   + N       KY           
Sbjct: 352 LDCSFNEIETLPSSVGQLSNIRTFAADHNFLTQLPPEIGN------WKY----------- 394

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                    IT+          L L    L  +P E+ +  ++  ++LS N ++ LP   
Sbjct: 395 ---------ITV----------LFLHSNKLEFLPEEMGDMQKLKVINLSDNRLKNLPFTF 435

Query: 239 SSCASLQTLILSRNKIK 255
           +    L  + LS N+ K
Sbjct: 436 TKLQQLTAMWLSDNQSK 452


>gi|6850952|emb|CAB71137.1| vartul-2 protein [Drosophila melanogaster]
          Length = 1247

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T KEL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 155/360 (43%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
                                          N ++ELP E+S   SL  L L++N ++  
Sbjct: 230 ------------------------------ENRLEELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|395735872|ref|XP_003776656.1| PREDICTED: protein LAP2 isoform 2 [Pongo abelii]
          Length = 1419

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 188/400 (47%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+A
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388


>gi|326668654|ref|XP_001920812.3| PREDICTED: leucine-rich repeat-containing protein 7-like [Danio
           rerio]
          Length = 1473

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 184/390 (47%), Gaps = 62/390 (15%)

Query: 35  LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 93
           L  +P+ I S  R L  L L  N+I  +P  +  C +L +  M +N LS LP  +  L  
Sbjct: 34  LQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVN 93

Query: 94  LGTLDLHSNQLKEY--CVEACQ----------------------LRLSVLDLSNNSLSGL 129
           L  LD+  N ++E+   ++ C+                      L L+ L L++  L  L
Sbjct: 94  LKELDISKNGIQEFPDNIKCCKCLSVVEASVNPIAKLPEGFTQLLNLTQLFLNDAFLEYL 153

Query: 130 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 189
           P   G+++ LR L L  N L+T+  S+       L +  R  L  NE SE     E + +
Sbjct: 154 PANFGRLSKLRILELRENHLKTMPKSIHR-----LSQLERLDLGSNEFSELPEVLEQIHS 208

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
           +        KEL L+  +L  IP  I +  ++  LDL++N I+ L  ++S C SL+ L+L
Sbjct: 209 L--------KELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIESLDADISGCESLEDLLL 260

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 308
           S N ++  PD+I   L  L+ LK+D+N L  +P +    + +L+  D S N + SLP   
Sbjct: 261 SANMLQQLPDSI-GKLKKLTTLKVDDNQLTSLP-NTIGSLSLLEEFDCSCNELESLPPTI 318

Query: 309 PF--------------SSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
            +              S LP       ++  + LR  +L   P +I ++ +LR+L+LS N
Sbjct: 319 GYLHSLRTFAADENFLSDLPREIGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDN 378

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L+++P  F  L  L  L LSDN   AL P
Sbjct: 379 RLKNLPFTFTKLKDLAALWLSDNQSKALIP 408



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 115/217 (52%), Gaps = 10/217 (4%)

Query: 201 LSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           L     +L  +P EI+     + +L L  N I+ELP +L +C +L+ L +  N + + P 
Sbjct: 27  LDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPT 86

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 318
            I  SL +L  L +  N +++ P D  K    L +++ S N IA LPE   F+ L +L +
Sbjct: 87  TI-ASLVNLKELDISKNGIQEFP-DNIKCCKCLSVVEASVNPIAKLPEG--FTQLLNLTQ 142

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L+L    L   P +  RL +LRIL+L +N L+++P+    L+ L  LDL  N  S LP  
Sbjct: 143 LFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLSQLERLDLGSNEFSELPEV 202

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           L  +  SL+ L LD N L++I  +I   G    L+YL
Sbjct: 203 LEQIH-SLKELWLDNNSLQTIPGSI---GKLRQLRYL 235



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 159/334 (47%), Gaps = 19/334 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N L+ L    IAS   L EL  SKN +   P+ I     L  ++   N I  
Sbjct: 71  LKKLSMPDNDLSNLPTT-IASLVNLKELDISKNGIQEFPDNIKCCKCLSVVEASVNPIAK 129

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P   +   +L + ++ +  L  LPA  G+LSKL  L+L  N LK       +L +L  L
Sbjct: 130 LPEGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLSQLERL 189

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL +N  S LP  + ++ +L++L L  N L+T+  S+        L   ++R+ E+ D++
Sbjct: 190 DLGSNEFSELPEVLEQIHSLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRI-ESLDAD 248

Query: 180 ASTTK--EDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSR 228
            S  +  EDL+  A  L               L ++   L+++P+ I     + + D S 
Sbjct: 249 ISGCESLEDLLLSANMLQQLPDSIGKLKKLTTLKVDDNQLTSLPNTIGSLSLLEEFDCSC 308

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           N ++ LPP +    SL+T     N + D P  I  +  +++ + L +N L  +P D    
Sbjct: 309 NELESLPPTIGYLHSLRTFAADENFLSDLPREI-GNCRNVTVMSLRSNKLEFLP-DEIGQ 366

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 321
           +  L++L+LS N + +LP    F+ L  L  L+L
Sbjct: 367 MTKLRVLNLSDNRLKNLPFT--FTKLKDLAALWL 398



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 144/319 (45%), Gaps = 62/319 (19%)

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           C    +  +SVLD S+ SL  +P EI     TL +L L  N +  L   L N    AL  
Sbjct: 16  CFRGEEEVISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFN--CQAL-- 71

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                                           K+LS+   +LS +P+ I     + +LD+
Sbjct: 72  --------------------------------KKLSMPDNDLSNLPTTIASLVNLKELDI 99

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S+N IQE P  +  C  L  +  S N I   P+   T L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQEFPDNIKCCKCLSVVEASVNPIAKLPEG-FTQLLNLTQLFLNDAFLEYLPAN-F 157

Query: 287 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLPH-------LQELYLRRM 324
             +  L+IL+L  N + ++P+              +  FS LP        L+EL+L   
Sbjct: 158 GRLSKLRILELRENHLKTMPKSIHRLSQLERLDLGSNEFSELPEVLEQIHSLKELWLDNN 217

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
            L+  P  I +L+QLR LDL++N ++S+        SL +L LS N +  LP  +G L+ 
Sbjct: 218 SLQTIPGSIGKLRQLRYLDLAKNRIESLDADISGCESLEDLLLSANMLQQLPDSIGKLK- 276

Query: 385 SLQALRLDGNPLRSIRRTI 403
            L  L++D N L S+  TI
Sbjct: 277 KLTTLKVDDNQLTSLPNTI 295



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 119/247 (48%), Gaps = 17/247 (6%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           +N L  MP++I  LS+L RLDL  N    +P  +    SL E ++ NN+L  +P  +GKL
Sbjct: 170 ENHLKTMPKSIHRLSQLERLDLGSNEFSELPEVLEQIHSLKELWLDNNSLQTIPGSIGKL 229

Query: 92  SKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
            +L  LDL  N+++  +  +  C+  L  L LS N L  LP  IGK+  L  L +  N L
Sbjct: 230 RQLRYLDLAKNRIESLDADISGCE-SLEDLLLSANMLQQLPDSIGKLKKLTTLKVDDNQL 288

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
            +L +++        L  L       E+ + S  + + +        + +  + +   LS
Sbjct: 289 TSLPNTI------GSLSLL-------EEFDCSCNELESLPPTIGYLHSLRTFAADENFLS 335

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P EI     +T + L  N ++ LP E+     L+ L LS N++K+ P    T L  L+
Sbjct: 336 DLPREIGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLP-FTFTKLKDLA 394

Query: 270 CLKLDNN 276
            L L +N
Sbjct: 395 ALWLSDN 401



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 109/256 (42%), Gaps = 38/256 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ + L   ++     L EL    N L  +P +IG L +L  LDL +NRI S
Sbjct: 186 LERLDLGSNEFSELPE-VLEQIHSLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIES 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           + + ISGC SL +  +  N L  LP  +GKL KL TL +  NQL         L  L   
Sbjct: 245 LDADISGCESLEDLLLSANMLQQLPDSIGKLKKLTTLKVDDNQLTSLPNTIGSLSLLEEF 304

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D S N L  LPP IG + +LR      N L  L   + N                     
Sbjct: 305 DCSCNELESLPPTIGYLHSLRTFAADENFLSDLPREIGN--------------------- 343

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                         ++V    +SL    L  +P EI +  ++  L+LS N ++ LP   +
Sbjct: 344 -----------CRNVTV----MSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFT 388

Query: 240 SCASLQTLILSRNKIK 255
               L  L LS N+ K
Sbjct: 389 KLKDLAALWLSDNQSK 404



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 279 RQVPSDGFK-DIPMLQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDILR 335
           R VP   F+ +  ++ +LD S+   SL + P   FS    L+ELYL   Q+ E P  +  
Sbjct: 10  RLVPCRCFRGEEEVISVLDYSH--CSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFN 67

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
            Q L+ L +  N L ++P    +L +L ELD+S N I   P
Sbjct: 68  CQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEFP 108


>gi|145523976|ref|XP_001447821.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415343|emb|CAK80424.1| unnamed protein product [Paramecium tetraurelia]
          Length = 771

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 212/443 (47%), Gaps = 33/443 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL---DLHQNR 57
           + K+   GNK+  +  + +     L +L  SKN +  + E  G+   LI+L   DL +N+
Sbjct: 205 IKKISAIGNKIQAIKQSDLIECKKLEDLQLSKNQIAFIEE--GAFYNLIQLRVLDLKENK 262

Query: 58  ILSIPSSISG----CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 113
           +        G    C  L    +  N L       G +  L  L L++N++KE   E   
Sbjct: 263 LKYFTQEQLGDNHEC--LDSIQLSFNQLDVYNCYEG-IQNLSVLLLNNNKIKELHKEIIN 319

Query: 114 LR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 172
           L+ L  LD+SNN L  LP ++G +  L ++ L GNPL+ +RS++ +     L KYL+ R 
Sbjct: 320 LKNLKTLDISNNDLGDLPSQLGFLAQLVRIQLEGNPLKCIRSNIRSAGALQLKKYLQQRT 379

Query: 173 PENEDSEASTT---KEDLITMAT------RLSVTSKELSLEGMNLSAIPSEIWEAGEITK 223
            +    E       K+ L           R  +   EL++   +++ I + ++    +  
Sbjct: 380 DDAAKLEVQADPKLKQQLYQSNNIWEEYLRNFLHKDELAIRQKSINLIDNCVFRLTNLII 439

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           +D S+N+I+ +P ++    +L+ +  + NKI       L +L  L  L+L  N ++ +PS
Sbjct: 440 IDFSQNNIEMIPDQIQQLRNLKKVNFNENKITQIS-LYLFNLPDLVELELRQNKIQFLPS 498

Query: 284 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ---LR 340
                +P L  LDL  N   L +N P + +P L  L    +   +  +    LQ+   L 
Sbjct: 499 REQVYLPNLIHLDLGKN---LLQNIP-NFVPDLTRLRRLLLAYNQIDSIDSLLQKESILE 554

Query: 341 ILDLSQNSLQSI-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           +LD+S NS+  +  E +  + +L   +L +NN+   P  LG +  SL+ L++DGNP + I
Sbjct: 555 VLDISNNSIDQLNDEIYFKMPNLQHFNLQNNNMRTFPTILGFM--SLKTLQIDGNPTKLI 612

Query: 400 RRTILDRGTKAVLKYLKDKIPEN 422
            R I+D+GT  +L YL  K P N
Sbjct: 613 SRQIIDKGTVHILDYLAKKHPLN 635



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 174/414 (42%), Gaps = 80/414 (19%)

Query: 48  LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKE 106
           L +LDL  N I  IP        L    +GNN +     +L K    L +L L +NQL E
Sbjct: 97  LTKLDLTNNNIQDIPL-YDTLQELQVLRLGNNKIGRFHFDLTKQFQNLKSLTLQNNQLVE 155

Query: 107 YCVEACQL----------------------RLSVLDLSNNSL----SGLPPEIGKMTTLR 140
           +   +C+L                       L +LD++NN      S LPP I K++ + 
Sbjct: 156 F---SCRLDSIVELNLADNKLTGIDNLYFPNLEILDITNNQFAQLPSYLPPLIKKISAI- 211

Query: 141 KLLLTGNPLRTLRSS-LVNGPTPALLKYLRSRLPENEDSEAST--------TKEDLITMA 191
                GN ++ ++ S L+       L+  ++++   E+              KE+ +   
Sbjct: 212 -----GNKIQAIKQSDLIECKKLEDLQLSKNQIAFIEEGAFYNLIQLRVLDLKENKLKYF 266

Query: 192 TRLSVTSKELSLEGMNLSAIPSEIWEAGE----ITKLDLSRNSIQELPPELSSCASLQTL 247
           T+  +      L+ + LS    +++   E    ++ L L+ N I+EL  E+ +  +L+TL
Sbjct: 267 TQEQLGDNHECLDSIQLSFNQLDVYNCYEGIQNLSVLLLNNNKIKELHKEIINLKNLKTL 326

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR-------------------QVPSDGFK- 287
            +S N + D P   L  L+ L  ++L+ NPL+                   Q   D  K 
Sbjct: 327 DISNNDLGDLPSQ-LGFLAQLVRIQLEGNPLKCIRSNIRSAGALQLKKYLQQRTDDAAKL 385

Query: 288 ----DIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
               D  + Q L  S NI          +  H  EL +R+  +      + RL  L I+D
Sbjct: 386 EVQADPKLKQQLYQSNNIWE----EYLRNFLHKDELAIRQKSINLIDNCVFRLTNLIIID 441

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
            SQN+++ IP+  + L +L +++ ++N I+ +   L  L P L  L L  N ++
Sbjct: 442 FSQNNIEMIPDQIQQLRNLKKVNFNENKITQISLYLFNL-PDLVELELRQNKIQ 494



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 28/217 (12%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           ++++ +NL     E W+   +TKLDL+ N+IQ++P    +   LQ L L  NKI  +   
Sbjct: 79  INIDTINLEG--EEWWQKCPLTKLDLTNNNIQDIPL-YDTLQELQVLRLGNNKIGRFHFD 135

Query: 261 ILTSLSSLSCLKLDNNPLRQVPS---------------DGFKDI--PMLQILDLSYN-IA 302
           +     +L  L L NN L +                   G  ++  P L+ILD++ N  A
Sbjct: 136 LTKQFQNLKSLTLQNNQLVEFSCRLDSIVELNLADNKLTGIDNLYFPNLEILDITNNQFA 195

Query: 303 SLPENPPFSSLPHLQELYLRRMQLRE-APTDILRLQQLRILDLSQNSLQSIPEG-FKNLT 360
            LP   P    P ++++     +++    +D++  ++L  L LS+N +  I EG F NL 
Sbjct: 196 QLPSYLP----PLIKKISAIGNKIQAIKQSDLIECKKLEDLQLSKNQIAFIEEGAFYNLI 251

Query: 361 SLTELDLSDNNISALPPE-LGLLEPSLQALRLDGNPL 396
            L  LDL +N +     E LG     L +++L  N L
Sbjct: 252 QLRVLDLKENKLKYFTQEQLGDNHECLDSIQLSFNQL 288


>gi|395502117|ref|XP_003755432.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Sarcophilus
           harrisii]
          Length = 582

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 196/421 (46%), Gaps = 43/421 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N  +   L    +RL     S 
Sbjct: 244 DVAHNQLEHLPKEIGTCTQITNLDLQHNELLDLPETIGNLSSLNRLGLRYNRLSAIPRSL 303

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELP--- 235
           A  +  + + +                N+S +P  +  +   +  L L+RN  Q  P   
Sbjct: 304 AKCSALEELNLEN-------------NNISTLPEGLLSSLVNLNSLTLARNCFQSYPMGG 350

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML--- 292
           P  S  +++ +L +  N+I   P  I +    LS L + +N L  +P D      M+   
Sbjct: 351 P--SQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLDYGTWTSMVELN 408

Query: 293 ----QILDLSYNIASLPE-------NPPFSSLPH-------LQELYLRRMQLREAPTDIL 334
               QI  +S +++ L         N     LPH       L+EL L   +L   P +I 
Sbjct: 409 LATNQITKISEDVSGLVSLEVLILSNNVLKRLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            L+ L+ L L+ N L ++P G  +LT+LT L L +N ++ LP E+G LE +L+ L L+ N
Sbjct: 469 YLKDLQKLVLTNNQLNNLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLE-NLEELYLNDN 527

Query: 395 P 395
           P
Sbjct: 528 P 528



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 184/388 (47%), Gaps = 19/388 (4%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   T LTEL    N L  +P  +G L  L+ L L +N + S+P S+     L    + +
Sbjct: 119 IKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRH 178

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  +P+ + +L  L TL L  N++     +   L +L +L +  N +  LP EIG++ 
Sbjct: 179 NKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLSIRENKIKQLPAEIGELC 238

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L +  N L  L   +         +     L  NE  +   T  +L ++       
Sbjct: 239 NLITLDVAHNQLEHLPKEI-----GTCTQITNLDLQHNELLDLPETIGNLSSL------- 286

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKD 256
              L L    LSAIP  + +   + +L+L  N+I  LP   LSS  +L +L L+RN  + 
Sbjct: 287 -NRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEGLLSSLVNLNSLTLARNCFQS 345

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
           +P    +  S++  L +++N + ++P   F    +L  L++  N + +LP +  + +   
Sbjct: 346 YPMGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLD--YGTWTS 403

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           + EL L   Q+ +   D+  L  L +L LS N L+ +P G  NL  L ELDL +N + +L
Sbjct: 404 MVELNLATNQITKISEDVSGLVSLEVLILSNNVLKRLPHGLGNLRKLRELDLEENKLESL 463

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P E+  L+  LQ L L  N L ++ R I
Sbjct: 464 PNEIAYLK-DLQKLVLTNNQLNNLPRGI 490



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I E  ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEK-DIKNLSKLI 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+     T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGTCTQITNLDLQHNELLDLPE 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLNRLGLRYNRLSAIPRSL 303



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 151/315 (47%), Gaps = 27/315 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+L  L    I + T +T L    N L  +PETIG+LS L RL L  NR+ +IP 
Sbjct: 243 LDVAHNQLEHLPKE-IGTCTQITNLDLQHNELLDLPETIGNLSSLNRLGLRYNRLSAIPR 301

Query: 64  SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 120
           S++ C +L E  + NN +S LP   L  L  L +L L  N  + Y +       ++  L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPEGLLSSLVNLNSLTLARNCFQSYPMGGPSQFSTIYSLN 361

Query: 121 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + +N ++ +P  I  +   L KL +  N L  L   L  G   ++++     L  N+ ++
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTAL--PLDYGTWTSMVEL---NLATNQITK 416

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            S     L+++          L L    L  +P  +    ++ +LDL  N ++ LP E++
Sbjct: 417 ISEDVSGLVSLEV--------LILSNNVLKRLPHGLGNLRKLRELDLEENKLESLPNEIA 468

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
               LQ L+L+ N++ + P  I   L++L+ L L  N L  +P    ++I  L+ L+  Y
Sbjct: 469 YLKDLQKLVLTNNQLNNLPRGI-GHLTNLTHLGLGENLLAHLP----EEIGTLENLEELY 523

Query: 300 NIASLPENPPFSSLP 314
               L +NP    LP
Sbjct: 524 ----LNDNPNLHGLP 534


>gi|395735876|ref|XP_003776658.1| PREDICTED: protein LAP2 isoform 4 [Pongo abelii]
          Length = 1346

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 188/400 (47%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+A
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388


>gi|3894383|gb|AAC78591.1| disease resistance protein [Solanum lycopersicum var. cerasiforme]
          Length = 968

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 133/419 (31%), Positives = 197/419 (47%), Gaps = 35/419 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 59
           +S+LD+  NKL+      I     LT L   +N LNG +P ++G+L+ L RLDL+ N++ 
Sbjct: 289 LSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPSSLGNLNNLSRLDLYNNKLS 348

Query: 60  -SIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQL--R 115
            SIP  I    SL    +G NAL+  +PA LG L+ L  L L++NQL     E       
Sbjct: 349 GSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSS 408

Query: 116 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS---- 170
           L+ L L NNSL+G +P  +G +  L  L L  N L         G  P  + YL S    
Sbjct: 409 LTELYLGNNSLNGSIPASLGNLNNLFMLYLYNNQLS--------GSIPEEIGYLSSLTEL 460

Query: 171 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
            L  N  + +       +   +RL + + +LS       +IP+       +  L LS N 
Sbjct: 461 FLGNNSLNGSIPASLGNLNNLSRLYLYNNQLS------GSIPASFGNMRNLQTLFLSDND 514

Query: 231 -IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKD 288
            I E+P  + +  SL+ L +SRN +K      L ++S L  L + +N  R ++PS    +
Sbjct: 515 LIGEIPSFVCNLTSLEVLYMSRNNLKGKVPQCLGNISDLHILSMSSNSFRGELPSS-ISN 573

Query: 289 IPMLQILDLSYNI--ASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLS 345
           +  L+ILD   N    ++P+   F ++  LQ   ++  +L    PT+      L  L+L 
Sbjct: 574 LTSLKILDFGRNNLEGAIPQ--FFGNISSLQVFDMQNNKLSGTLPTNFSIGCSLISLNLH 631

Query: 346 QNSL-QSIPEGFKNLTSLTELDLSDNNIS-ALPPELGLLEPSLQALRLDGNPLRSIRRT 402
            N L   IP    N   L  LDL DN ++   P  LG L P L+ LRL  N L    R+
Sbjct: 632 GNELADEIPRSLDNCKKLQVLDLGDNQLNDTFPMWLGTL-PELRVLRLTSNKLHGPIRS 689



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 180/389 (46%), Gaps = 31/389 (7%)

Query: 25  LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALS 82
           LT+L    N L+G +P ++G+++ L  L L++N++   IP  I    SL +  +  N LS
Sbjct: 169 LTKLSLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGYLRSLTKLSLDINFLS 228

Query: 83  A-LPAELGKLSKLGTLDLHSNQLKEYCVEAC-QLR-LSVLDLSNNSLSG-LPPEIGKMTT 138
             +PA LG L+ L  L L++NQL     E    LR L+ L L  N LSG +P  +G +  
Sbjct: 229 GSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNN 288

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRL 194
           L +L L  N L         G  P  + YLRS     L EN  + +  +    +   +RL
Sbjct: 289 LSRLDLYNNKLS--------GSIPEEIGYLRSLTYLDLGENALNGSIPSSLGNLNNLSRL 340

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNK 253
            + + +LS       +IP EI     +T LDL  N++   +P  L +  +L  L L  N+
Sbjct: 341 DLYNNKLS------GSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQ 394

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--IASLPENPPFS 311
           +       +  LSSL+ L L NN L         ++  L +L L  N    S+PE   + 
Sbjct: 395 LSGSIPEEIGYLSSLTELYLGNNSLNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGY- 453

Query: 312 SLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSD 369
            L  L EL+L    L  + P  +  L  L  L L  N L  SIP  F N+ +L  L LSD
Sbjct: 454 -LSSLTELFLGNNSLNGSIPASLGNLNNLSRLYLYNNQLSGSIPASFGNMRNLQTLFLSD 512

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRS 398
           N++    P       SL+ L +  N L+ 
Sbjct: 513 NDLIGEIPSFVCNLTSLEVLYMSRNNLKG 541



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 155/334 (46%), Gaps = 30/334 (8%)

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSG-LPPEIG 134
           NN    +P E+G L+ L  LDL++NQ+            +L ++ + NN L+G +P EIG
Sbjct: 105 NNISGTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIG 164

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITM 190
            + +L KL        +L  + ++G  PA L  + +     L EN+ S     +   +  
Sbjct: 165 YLRSLTKL--------SLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGYLRS 216

Query: 191 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLIL 249
            T+LS+    LS       +IP+ +     ++ L L  N +   +P E+    SL  L L
Sbjct: 217 LTKLSLDINFLS------GSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTKLSL 270

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI--ASLPEN 307
             N +     A L +L++LS L L NN L     +    +  L  LDL  N    S+P +
Sbjct: 271 GINFLSGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPSS 330

Query: 308 PPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTEL 365
               +L +L  L L   +L  + P +I  L+ L  LDL +N+L  SIP    NL +L  L
Sbjct: 331 --LGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFML 388

Query: 366 DLSDNNISA-LPPELGLLEPSLQALRLDGNPLRS 398
            L +N +S  +P E+G L  SL  L L  N L  
Sbjct: 389 YLYNNQLSGSIPEEIGYLS-SLTELYLGNNSLNG 421



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 134/307 (43%), Gaps = 47/307 (15%)

Query: 38  MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLG 95
           +P +I +L+ L  LD  +N +  +IP       SL  F M NN LS  LP        L 
Sbjct: 567 LPSSISNLTSLKILDFGRNNLEGAIPQFFGNISSLQVFDMQNNKLSGTLPTNFSIGCSLI 626

Query: 96  TLDLHSNQLKE---YCVEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRT 151
           +L+LH N+L +     ++ C+ +L VLDL +N L+   P  +G +  LR L LT N L  
Sbjct: 627 SLNLHGNELADEIPRSLDNCK-KLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNKLHG 685

Query: 152 -LRSSLVNGPTPAL---------------------LKYLRSRLPENEDSEASTTKEDLIT 189
            +RSS      P L                     LK +R+     E+    +  +D + 
Sbjct: 686 PIRSSGAEIMFPDLRIIDLSRNAFSQDLPTSLFEHLKGMRTVDKTMEEPSYESYYDDSVV 745

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLI 248
           + T      K L LE + + ++          T +DLS N  +  +P  L    +++ L 
Sbjct: 746 VVT------KGLELEIVRILSL---------YTIIDLSSNKFEGHIPSVLGDLIAIRVLN 790

Query: 249 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI--ASLPE 306
           +S N ++ +  + L SLS L  L L  N L          +  L++L+LS+N     +P+
Sbjct: 791 VSHNALQGYIPSSLGSLSILESLDLSFNQLSGEIPQQLASLTFLEVLNLSHNYLQGCIPQ 850

Query: 307 NPPFSSL 313
            P F + 
Sbjct: 851 GPQFRTF 857



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 84/178 (47%), Gaps = 5/178 (2%)

Query: 223 KLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
            LDLS N+I   +PPE+ +  +L  L L+ N+I       + SL+ L  +++ NN L   
Sbjct: 99  NLDLSNNNISGTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGF 158

Query: 282 PSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLR 340
             +    +  L  L L  N  S        ++ +L  L+L   QL    P +I  L+ L 
Sbjct: 159 IPEEIGYLRSLTKLSLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGYLRSLT 218

Query: 341 ILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGNPL 396
            L L  N L  SIP    NL +L+ L L +N +S  +P E+G L  SL  L L  N L
Sbjct: 219 KLSLDINFLSGSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLR-SLTKLSLGINFL 275


>gi|301610186|ref|XP_002934640.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387 homolog [Xenopus (Silurana) tropicalis]
          Length = 813

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 196/401 (48%), Gaps = 24/401 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN +  L ++  AS   L  L    N ++ +P+ +  LS+L++L L  N+I S+P 
Sbjct: 215 LCISGNSMKTLPDS-TASLKNLHVLNLDGNQISALPKAVFRLSQLVKLCLSGNQIKSLPK 273

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  + +N L+ LP +L  L+ L  L L  N+L     +   L+ L VL ++
Sbjct: 274 EIGDLKNLRELSLSSNQLTFLPVQLYNLTSLEELTLDDNKLTAISDKLQNLKQLKVLSIA 333

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN L+ +  ++     +  L L GN +  L + + N      L   R+ L    D  A  
Sbjct: 334 NNLLTDITEKVCWCPAIECLKLNGNQMYRLPTKIHNLRNLKELHIERNALEMLPDQLAHL 393

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
               +I  A               NL  IP E+    +ITKLDLS N + E+P  LSS  
Sbjct: 394 NNLSVIVCANN-------------NLLWIPIELKNCNQITKLDLSGNKLSEVPQALSSMT 440

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           SL  L L++N+I +  ++I+ +   L  L+L  N L  V S  F  +  L  LDLS N I
Sbjct: 441 SLLYLNLNQNEIHEIANSIIHN-RKLEHLELSGNKL-TVFSVHFCGLHNLAYLDLSRNEI 498

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
            S+P     S+L  L EL L   + R  P ++  L+ L+ +DLS N ++++P G   L  
Sbjct: 499 NSVPS--AISNLESLSELLLHSNKFRRFPIELCALKSLQKIDLSGNQIETVPSGISLLEG 556

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRL---DGNPLRSI 399
           L  ++LS+N+    P EL  +  SL+ L++   DG  L S+
Sbjct: 557 LRYVNLSNNSFKVFPRELFSVS-SLETLKISQKDGRKLISL 596



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 180/362 (49%), Gaps = 28/362 (7%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +P  I SLS+L  L+++ N+I  +P  ISG  ++ + +  NN LS LP  LG L+
Sbjct: 151 NALVSLPPEICSLSQLTALNVNHNQIAVLPHEISGLKNIKQLFANNNKLSQLPPCLGDLT 210

Query: 93  KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
            L  L +  N +K        L+ L VL+L  N +S LP  + +++ L KL L+GN +++
Sbjct: 211 TLQVLCISGNSMKTLPDSTASLKNLHVLNLDGNQISALPKAVFRLSQLVKLCLSGNQIKS 270

Query: 152 LRSSLVNGPTPALLKYLRS-RLPENEDS------EASTTKEDLITMATRLSVTS------ 198
           L   + +      LK LR   L  N+ +         T+ E+L     +L+  S      
Sbjct: 271 LPKEIGD------LKNLRELSLSSNQLTFLPVQLYNLTSLEELTLDDNKLTAISDKLQNL 324

Query: 199 ---KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              K LS+    L+ I  ++     I  L L+ N +  LP ++ +  +L+ L + RN ++
Sbjct: 325 KQLKVLSIANNLLTDITEKVCWCPAIECLKLNGNQMYRLPTKIHNLRNLKELHIERNALE 384

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             PD  L  L++LS +   NN L  +P +  K+   +  LDLS N ++ +P+    SS+ 
Sbjct: 385 MLPDQ-LAHLNNLSVIVCANNNLLWIPIE-LKNCNQITKLDLSGNKLSEVPQ--ALSSMT 440

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
            L  L L + ++ E    I+  ++L  L+LS N L      F  L +L  LDLS N I++
Sbjct: 441 SLLYLNLNQNEIHEIANSIIHNRKLEHLELSGNKLTVFSVHFCGLHNLAYLDLSRNEINS 500

Query: 375 LP 376
           +P
Sbjct: 501 VP 502



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 180/408 (44%), Gaps = 83/408 (20%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +   T L  L+ S N +  +P ++  LS+L  L L  N ++S+P  I     L    + +
Sbjct: 114 VFRCTNLQCLLLSNNFMTHLPTSLCHLSKLEILSLEGNALVSLPPEICSLSQLTALNVNH 173

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N ++ LP E+  L  +  L  +                      NN LS LPP +G +TT
Sbjct: 174 NQIAVLPHEISGLKNIKQLFAN----------------------NNKLSQLPPCLGDLTT 211

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L+ L ++GN ++TL                        DS AS     +           
Sbjct: 212 LQVLCISGNSMKTL-----------------------PDSTASLKNLHV----------- 237

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
             L+L+G  +SA+P  ++   ++ KL LS N I+ LP E+    +L+ L LS N++   P
Sbjct: 238 --LNLDGNQISALPKAVFRLSQLVKLCLSGNQIKSLPKEIGDLKNLRELSLSSNQLTFLP 295

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--------------IASL 304
              L +L+SL  L LD+N L  + SD  +++  L++L ++ N              I  L
Sbjct: 296 -VQLYNLTSLEELTLDDNKLTAI-SDKLQNLKQLKVLSIANNLLTDITEKVCWCPAIECL 353

Query: 305 PEN--------PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
             N            +L +L+EL++ R  L   P  +  L  L ++  + N+L  IP   
Sbjct: 354 KLNGNQMYRLPTKIHNLRNLKELHIERNALEMLPDQLAHLNNLSVIVCANNNLLWIPIEL 413

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
           KN   +T+LDLS N +S +P  L  +  SL  L L+ N +  I  +I+
Sbjct: 414 KNCNQITKLDLSGNKLSEVPQALSSMT-SLLYLNLNQNEIHEIANSII 460



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 166/351 (47%), Gaps = 44/351 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +E N L +L + L A    L+ ++ + N L  +P  + + +++ +LDL  N++  
Sbjct: 373 LKELHIERNALEMLPDQL-AHLNNLSVIVCANNNLLWIPIELKNCNQITKLDLSGNKLSE 431

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P ++S   SL    +  N +  +   +    KL  L+L  N+L  + V  C L  L+ L
Sbjct: 432 VPQALSSMTSLLYLNLNQNEIHEIANSIIHNRKLEHLELSGNKLTVFSVHFCGLHNLAYL 491

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DLS N ++ +P  I  + +L +LLL  N  R           P  L  L+S         
Sbjct: 492 DLSRNEINSVPSAISNLESLSELLLHSNKFRRF---------PIELCALKSL-------- 534

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              +++ L G  +  +PS I     +  ++LS NS +  P EL 
Sbjct: 535 -------------------QKIDLSGNQIETVPSGISLLEGLRYVNLSNNSFKVFPRELF 575

Query: 240 SCASLQTLILSRN---KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           S +SL+TL +S+    K+   PD  L+ L +L  L++ +N ++ +P    +   ++Q+  
Sbjct: 576 SVSSLETLKISQKDGRKLISLPDE-LSKLKNLKELEISDNNIKTLPGSIGEMKNLVQLTA 634

Query: 297 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
            S  +  LP +   SSL  LQ+L L+  QL   P+DI  LQ+LR ++L  N
Sbjct: 635 TSNQLYHLPAS--ISSLAALQQLSLKGNQLTSLPSDISGLQKLREINLDSN 683



 Score = 42.4 bits (98), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 8/139 (5%)

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLPHLQELYLRRMQLREAPTDI 333
           NN  R VPS          I  ++ N   L E PP      +LQ L L    +   PT +
Sbjct: 84  NNMPRTVPSGTG------SITSINLNSKELTEIPPDVFRCTNLQCLLLSNNFMTHLPTSL 137

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
             L +L IL L  N+L S+P    +L+ LT L+++ N I+ LP E+  L+ +++ L  + 
Sbjct: 138 CHLSKLEILSLEGNALVSLPPEICSLSQLTALNVNHNQIAVLPHEISGLK-NIKQLFANN 196

Query: 394 NPLRSIRRTILDRGTKAVL 412
           N L  +   + D  T  VL
Sbjct: 197 NKLSQLPPCLGDLTTLQVL 215



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  N +  L  + I     L +L A+ N L  +P +I SL+ L +L L  N++ S
Sbjct: 606 LKELEISDNNIKTLPGS-IGEMKNLVQLTATSNQLYHLPASISSLAALQQLSLKGNQLTS 664

Query: 61  IPSSISGCCSLAEFYMGNNAL 81
           +PS ISG   L E  + +N +
Sbjct: 665 LPSDISGLQKLREINLDSNPM 685


>gi|24650336|ref|NP_733156.1| scribbled, isoform C [Drosophila melanogaster]
 gi|23172364|gb|AAN14078.1| scribbled, isoform C [Drosophila melanogaster]
          Length = 1247

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 155/360 (43%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
                                          N ++ELP E+S   SL  L L++N ++  
Sbjct: 230 ------------------------------ENRLEELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|403265578|ref|XP_003925006.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Saimiri boliviensis boliviensis]
          Length = 560

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 182/422 (43%), Gaps = 66/422 (15%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN L  L    I + T L E+   +N     P+ +  L  L  +DL +N+I +IP 
Sbjct: 147 LGLTGNHLKCLPKE-IVNQTKLREIYLKQNQFEVFPQELCVLYNLEIIDLDENKIGAIPE 205

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I     L +F++ +N L  LPA L + S+L                      SVLDLS+
Sbjct: 206 EIGHLMRLQKFFVASNNLPVLPASLCQCSQL----------------------SVLDLSH 243

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N L  +P  + ++  + ++ L+GN L  +   L+   T   L YLR+             
Sbjct: 244 NLLHSIPNSLAELGEMTEIGLSGNRLEKV-PRLICRWTSLHLLYLRN------------- 289

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
                T   RL  + + L    +NL               LDLS+N +   PP++ +  +
Sbjct: 290 -----TGLHRLRGSFRRL----VNLRC-------------LDLSQNYLDHCPPQICALEN 327

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQI-LDLSYN 300
           L+ L L  NKI   P   L SLS L  L L  N     P +    + +  L I  D    
Sbjct: 328 LEVLALDDNKIWQLPSE-LGSLSKLKILGLTGNEFLSFPEEVLSLESLEKLYIGQDQGSK 386

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
           +  +PE+     L  L+ELY+    L   P  +  +  L +LD   N L+ +P+      
Sbjct: 387 LTYVPED--IGKLQSLKELYIENNHLEYLPMSLGSMPNLEVLDCRHNLLKQLPDAICQAQ 444

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
           +L EL L DN ++ LP  L  L  +++ L L  NP+    + +   G +A+ +YLK+K  
Sbjct: 445 ALQELLLEDNLLTHLPENLDSL-VNIKVLTLMDNPMEEPPKEVCAEGNEAIWQYLKEKRK 503

Query: 421 EN 422
            N
Sbjct: 504 RN 505



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 163/357 (45%), Gaps = 41/357 (11%)

Query: 74  FYMG--NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 130
           F++   N +L+A+P E+   ++L  + L +NQ++E   E  +L+ + VL L  N+L  L 
Sbjct: 28  FFINASNQSLTAIPLEIFAFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLC 87

Query: 131 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLIT 189
           P +G++++L  L L+ NP+    SSL+     + L+ LR  RL +      +  KE  I 
Sbjct: 88  PALGQLSSLESLDLSYNPI--FSSSLL---VVSFLRALRELRLYQ------TDLKEIPII 136

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
           +   L    + L L G +L  +P EI    ++ ++ L +N  +  P EL    +L+ + L
Sbjct: 137 ICKNLH-HLELLGLTGNHLKCLPKEIVNQTKLREIYLKQNQFEVFPQELCVLYNLEIIDL 195

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLP--- 305
             NKI   P+ I   L  L    + +N L  +P+        L +LDLS+N+  S+P   
Sbjct: 196 DENKIGAIPEEI-GHLMRLQKFFVASNNLPVLPA-SLCQCSQLSVLDLSHNLLHSIPNSL 253

Query: 306 ----------------ENPP--FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
                           E  P        L  LYLR   L        RL  LR LDLSQN
Sbjct: 254 AELGEMTEIGLSGNRLEKVPRLICRWTSLHLLYLRNTGLHRLRGSFRRLVNLRCLDLSQN 313

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
            L   P     L +L  L L DN I  LP ELG L   L+ L L GN   S    +L
Sbjct: 314 YLDHCPPQICALENLEVLALDDNKIWQLPSELGSLS-KLKILGLTGNEFLSFPEEVL 369



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 108/224 (48%), Gaps = 27/224 (12%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA------- 260
           L+AIP EI+   E+ ++ L  N I+E+P E+    +++ L L +N ++    A       
Sbjct: 37  LTAIPLEIFAFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPALGQLSSL 96

Query: 261 ----------------ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 303
                           +++ L +L  L+L    L+++P    K++  L++L L+ N +  
Sbjct: 97  ESLDLSYNPIFSSSLLVVSFLRALRELRLYQTDLKEIPIIICKNLHHLELLGLTGNHLKC 156

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
           LP+     +   L+E+YL++ Q    P ++  L  L I+DL +N + +IPE   +L  L 
Sbjct: 157 LPKE--IVNQTKLREIYLKQNQFEVFPQELCVLYNLEIIDLDENKIGAIPEEIGHLMRLQ 214

Query: 364 ELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRG 407
           +  ++ NN+  LP  L      L  L L  N L SI  ++ + G
Sbjct: 215 KFFVASNNLPVLPASLCQCS-QLSVLDLSHNLLHSIPNSLAELG 257


>gi|359483612|ref|XP_002272319.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           FLS2-like [Vitis vinifera]
          Length = 1146

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 202/455 (44%), Gaps = 77/455 (16%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSI 61
           L +  NK T      I + T LT L  S N L G +P  IGSL  L  L +H N +  SI
Sbjct: 318 LTLHSNKFTGKIPAQITNLTNLTILSMSFNFLTGELPSNIGSLHNLKNLTVHNNLLEGSI 377

Query: 62  PSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVE---ACQLRLS 117
           PSSI+ C  L    +  N ++  +P  LG+L  L  L L  N++     +    C   L+
Sbjct: 378 PSSITNCTHLVNIGLAYNMITGEIPQGLGQLPNLTFLGLGVNKMSGNIPDDLFNCS-NLA 436

Query: 118 VLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--RLPE 174
           +LDL+ N+ SG L P IGK+  L++L       +  ++SLV GP P  +  L     L  
Sbjct: 437 ILDLARNNFSGVLKPGIGKLYNLQRL-------QAHKNSLV-GPIPPEIGNLTQLFSLQL 488

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-E 233
           N +S + T   +L  ++    +   + +LEG    AIP EI+E   +++L L  N     
Sbjct: 489 NGNSLSGTVPPELSKLSLLQGLYLDDNALEG----AIPEEIFELKHLSELGLGDNRFAGH 544

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL-RQVPS--------- 283
           +P  +S   SL  L L+ N +     A +  LS L+ L L +N L   +P          
Sbjct: 545 IPHAVSKLESLLNLYLNGNVLNGSIPASMARLSRLAILDLSHNHLVGSIPGPVIASMKNM 604

Query: 284 ----------------DGFKDIPMLQILDLSYN--IASLPEN------------------ 307
                           D    + M+Q++D+S N    S+PE                   
Sbjct: 605 QIYLNFSHNFLSGPIPDEIGKLEMVQVVDMSNNNLSGSIPETLQGCRNLFNLDLSVNELS 664

Query: 308 -----PPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQS-IPEGFKNLT 360
                  F+ +  L  L L R  L    P  +  ++ L  LDLSQN  +  IPE + N++
Sbjct: 665 GPVPEKAFAQMDVLTSLNLSRNNLNGGLPGSLANMKNLSSLDLSQNKFKGMIPESYANIS 724

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           +L +L+LS N +    PE G+ + ++ A  L GNP
Sbjct: 725 TLKQLNLSFNQLEGRVPETGIFK-NVSASSLVGNP 758



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 128/410 (31%), Positives = 193/410 (47%), Gaps = 35/410 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSI 61
           LD+  N  T      +   + L EL   +N L+G +P  +G+L  L  LDL  N +  SI
Sbjct: 78  LDLSSNSFTGHIPPQLGLCSQLLELNLFQNSLSGSIPPELGNLRNLQSLDLGSNFLEGSI 137

Query: 62  PSSISGCCSLAEF-YMGNNALSALPAELGKLSKLGTLDLHSNQL-KEYCVEACQLR-LSV 118
           P SI  C +L     + NN    +P ++G L+ L  L L+SN +     V   +L  L  
Sbjct: 138 PKSICNCTALLGLGIIFNNLTGTIPTDIGNLANLQILVLYSNNIIGPIPVSIGKLGDLQS 197

Query: 119 LDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL----KYLRSRLP 173
           LDLS N LSG +PPEIG ++ L  L L  N L        +G  P+ L    K +   L 
Sbjct: 198 LDLSINQLSGVMPPEIGNLSNLEYLQLFENHL--------SGKIPSELGQCKKLIYLNLY 249

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS-IQ 232
            N+ +    ++   +     L +    L+      S IPS +++   +T L +S N  I 
Sbjct: 250 SNQFTGGIPSELGNLVQLVALKLYKNRLN------STIPSSLFQLKYLTHLGISENELIG 303

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPM 291
            +P EL S  SLQ L L  NK      A +T+L++L+ L +  N L  ++PS+    +  
Sbjct: 304 TIPSELGSLRSLQVLTLHSNKFTGKIPAQITNLTNLTILSMSFNFLTGELPSN-IGSLHN 362

Query: 292 LQILDLSYNI--ASLPENPPFSSLPHLQELYL-RRMQLREAPTDILRLQQLRILDLSQNS 348
           L+ L +  N+   S+P +   ++  HL  + L   M   E P  + +L  L  L L  N 
Sbjct: 363 LKNLTVHNNLLEGSIPSS--ITNCTHLVNIGLAYNMITGEIPQGLGQLPNLTFLGLGVNK 420

Query: 349 LQS-IPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGNPL 396
           +   IP+   N ++L  LDL+ NN S  L P +G L  +LQ L+   N L
Sbjct: 421 MSGNIPDDLFNCSNLAILDLARNNFSGVLKPGIGKLY-NLQRLQAHKNSL 469



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 184/419 (43%), Gaps = 56/419 (13%)

Query: 11  LTVLSNNLIASWTM-------LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-I 61
           L + SNN+I    +       L  L  S N L+G MP  IG+LS L  L L +N +   I
Sbjct: 174 LVLYSNNIIGPIPVSIGKLGDLQSLDLSINQLSGVMPPEIGNLSNLEYLQLFENHLSGKI 233

Query: 62  PSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEA-CQLR-LSV 118
           PS +  C  L    + +N  +  +P+ELG L +L  L L+ N+L      +  QL+ L+ 
Sbjct: 234 PSELGQCKKLIYLNLYSNQFTGGIPSELGNLVQLVALKLYKNRLNSTIPSSLFQLKYLTH 293

Query: 119 LDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL------------ 165
           L +S N L G +P E+G + +L+ L        TL S+   G  PA +            
Sbjct: 294 LGISENELIGTIPSELGSLRSLQVL--------TLHSNKFTGKIPAQITNLTNLTILSMS 345

Query: 166 -KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
             +L   LP N  S  +      +T+   L        LEG    +IPS I     +  +
Sbjct: 346 FNFLTGELPSNIGSLHNLKN---LTVHNNL--------LEG----SIPSSITNCTHLVNI 390

Query: 225 DLSRNSIQ-ELPPELSSCASLQTLILSRNKIK-DWPDAILTSLSSLSCLKLDNNPLRQVP 282
            L+ N I  E+P  L    +L  L L  NK+  + PD +    S+L+ L L  N    V 
Sbjct: 391 GLAYNMITGEIPQGLGQLPNLTFLGLGVNKMSGNIPDDLFNC-SNLAILDLARNNFSGVL 449

Query: 283 SDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRI 341
             G   +  LQ L    N    P  P   +L  L  L L    L    P ++ +L  L+ 
Sbjct: 450 KPGIGKLYNLQRLQAHKNSLVGPIPPEIGNLTQLFSLQLNGNSLSGTVPPELSKLSLLQG 509

Query: 342 LDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGNPLRS 398
           L L  N+L+ +IPE    L  L+EL L DN  +  +P  +  LE SL  L L+GN L  
Sbjct: 510 LYLDDNALEGAIPEEIFELKHLSELGLGDNRFAGHIPHAVSKLE-SLLNLYLNGNVLNG 567



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 117/284 (41%), Gaps = 40/284 (14%)

Query: 116 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           L VLDLS+NS +G +PP++G  + L +L L  N L        +G  P  L  LR+    
Sbjct: 75  LQVLDLSSNSFTGHIPPQLGLCSQLLELNLFQNSL--------SGSIPPELGNLRN---- 122

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-E 233
                              L + S    LEG    +IP  I     +  L +  N++   
Sbjct: 123 ----------------LQSLDLGSN--FLEG----SIPKSICNCTALLGLGIIFNNLTGT 160

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           +P ++ + A+LQ L+L  N I       +  L  L  L L  N L  V      ++  L+
Sbjct: 161 IPTDIGNLANLQILVLYSNNIIGPIPVSIGKLGDLQSLDLSINQLSGVMPPEIGNLSNLE 220

Query: 294 ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQS- 351
            L L  N  S            L  L L   Q     P+++  L QL  L L +N L S 
Sbjct: 221 YLQLFENHLSGKIPSELGQCKKLIYLNLYSNQFTGGIPSELGNLVQLVALKLYKNRLNST 280

Query: 352 IPEGFKNLTSLTELDLSDNN-ISALPPELGLLEPSLQALRLDGN 394
           IP     L  LT L +S+N  I  +P ELG L  SLQ L L  N
Sbjct: 281 IPSSLFQLKYLTHLGISENELIGTIPSELGSLR-SLQVLTLHSN 323


>gi|167376881|ref|XP_001734192.1| leucine-rich repeat containing protein [Entamoeba dispar SAW760]
 gi|165904420|gb|EDR29643.1| leucine-rich repeat containing protein, putative [Entamoeba dispar
           SAW760]
          Length = 861

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 207/469 (44%), Gaps = 82/469 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N L     ++    T LTE+  S N +  + +  GSL  L  +DL  NRI S
Sbjct: 76  LKTLDLSSNHLKRFCKSI--KLTSLTEINLSINQITKIDDDFGSLHALRFMDLSINRIQS 133

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAEL-----------------------GKLSKLGTL 97
           +P  +S   SL    + NN L++ P  L                        K+S L  L
Sbjct: 134 VPKHLSKLTSLTFIDISNNLLTSFPTPLLELSSLIVLKVKENKITTIPNGMSKMSNLQIL 193

Query: 98  DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           D+ +N++ +     C+L +LSVLD+S N ++ +  +I  +TT++++ ++ +PL+TL  S 
Sbjct: 194 DISNNKIDKITPSLCKLTKLSVLDVSANPINEINDQIQNLTTIKEIDISYSPLKTLPKSF 253

Query: 157 ---------------VNGPTPALLKYLR--------------SRLPENEDSEASTTK--- 184
                          V  P   L K+ +              + LP + D + S  +   
Sbjct: 254 MSLVGLRKLTLQHTSVKVPPAGLQKFTKVSELNLSNGEFEKVTELPCSGDIDLSCNQIIE 313

Query: 185 ---EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGEITKLDL 226
               D+     +L++                 K L L+   L +IP E++    +T LDL
Sbjct: 314 LDLPDMEYSIHKLNLGQNRLKDFPNIKCLREIKTLILQKNMLGSIPLEMFTGSSLTALDL 373

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S NS    P  +++C +L  L +S N +   PD      + L  L L  N + ++P +  
Sbjct: 374 SSNSFNAFPMSITTCTNLVVLNMSNNYLDSLPDISYNCFAKLEALLLGINIIDRLP-ETM 432

Query: 287 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
            ++  L  L L +N ++ +PE+    S+  L EL+L   Q+ E P     L  L IL+LS
Sbjct: 433 SELTNLTTLHLEHNKLSKIPES--LFSMTKLVELFLNCNQIPELPEKFSLLTNLEILELS 490

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            N ++ I     NL  + +LDLS N I   P +L  +  SL++L L  N
Sbjct: 491 CNYIKEITP-IVNLVGIKDLDLSTNQIEKCPSDLCGM-TSLRSLDLSYN 537



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 176/405 (43%), Gaps = 60/405 (14%)

Query: 26  TELIASKNLLNGMP--ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           T+++     L   P  E    +  ++ +D+  NRI  IPS I+    L +F   +N +  
Sbjct: 7   TKIVKHAKNLTEFPQEEVKKEIKTVVLIDVSMNRIQEIPSQINSIAKLQKFRGNDNMIKT 66

Query: 84  LPAELGKLSKLGTLDLHSNQLKEYC-----VEACQLRLSV------------------LD 120
           LP+++  +  L TLDL SN LK +C         ++ LS+                  +D
Sbjct: 67  LPSQIN-IPSLKTLDLSSNHLKRFCKSIKLTSLTEINLSINQITKIDDDFGSLHALRFMD 125

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS-- 178
           LS N +  +P  + K+T+L  + ++ N L +  + L+   +  +LK   +++    +   
Sbjct: 126 LSINRIQSVPKHLSKLTSLTFIDISNNLLTSFPTPLLELSSLIVLKVKENKITTIPNGMS 185

Query: 179 --------EASTTKEDLITMA----TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                   + S  K D IT +    T+LSV    L +    ++ I  +I     I ++D+
Sbjct: 186 KMSNLQILDISNNKIDKITPSLCKLTKLSV----LDVSANPINEINDQIQNLTTIKEIDI 241

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV---PS 283
           S + ++ LP    S   L+ L L    +K  P A L   + +S L L N    +V   P 
Sbjct: 242 SYSPLKTLPKSFMSLVGLRKLTLQHTSVK-VPPAGLQKFTKVSELNLSNGEFEKVTELPC 300

Query: 284 DGFKDIPMLQIL-----DLSYNIAS-------LPENPPFSSLPHLQELYLRRMQLREAPT 331
            G  D+   QI+     D+ Y+I         L + P    L  ++ L L++  L   P 
Sbjct: 301 SGDIDLSCNQIIELDLPDMEYSIHKLNLGQNRLKDFPNIKCLREIKTLILQKNMLGSIPL 360

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           ++     L  LDLS NS  + P      T+L  L++S+N + +LP
Sbjct: 361 EMFTGSSLTALDLSSNSFNAFPMSITTCTNLVVLNMSNNYLDSLP 405


>gi|67468662|ref|XP_650359.1| leucine rich repeat / protein phosphatase 2C domain containing
           protein [Entamoeba histolytica HM-1:IMSS]
 gi|56466974|gb|EAL44972.1| leucine rich repeat / protein phosphatase 2C domain containing
           protein [Entamoeba histolytica HM-1:IMSS]
          Length = 861

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 208/469 (44%), Gaps = 82/469 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N L     ++    T LTE+  S N +  + +  GSL  L  +DL  NRI S
Sbjct: 76  LKTLDLSSNHLKRFCKSI--KLTSLTEINLSINQITKIDDDFGSLHALRFMDLSINRIQS 133

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAEL-----------------------GKLSKLGTL 97
           +P  +S   SL    + NN L++ P  L                        K+S L  L
Sbjct: 134 VPKHLSKLTSLTFIDISNNLLTSFPTPLLELSSLIVLKVKENKITTIPNGMSKMSNLQIL 193

Query: 98  DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           D+ +N++ +     C+L +LSVLD+S N ++ +  +I  +TT++++ ++ +PL+TL  S 
Sbjct: 194 DISNNKIDKITPSLCKLTKLSVLDVSANPINEINDQIQNLTTIKEIDISYSPLKTLPKSF 253

Query: 157 ---------------VNGPTPALLKYLR--------------SRLPENEDSEASTTK--- 184
                          V  P   L K+ +              + LP + D + S  +   
Sbjct: 254 MSLVGLRKLTLQHTSVKVPPAGLQKFTKVSELNLSNGEFEKVTELPCSGDIDLSCNQIVE 313

Query: 185 ---EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGEITKLDL 226
               D+     +L++                 K L L+   L +IP E++    +T LDL
Sbjct: 314 LDLPDMEYSIHKLNLGQNRLKDFPNIKCLREIKTLILQKNMLGSIPLEMFTGTSLTALDL 373

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S NS    P  +++C +L  L +S N +   PD   +  + L  L L  N + ++P +  
Sbjct: 374 SSNSFNAFPMSITTCTNLVVLNMSNNYLDSLPDISYSCFAKLEALLLGINIIDRLP-ETM 432

Query: 287 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
            ++  L  L L +N ++ +PE+    S+  L EL+L   Q+ E P     L  L IL+LS
Sbjct: 433 NELTNLTTLHLEHNKLSKIPES--LFSMTKLVELFLNCNQIPELPEKFSLLTNLEILELS 490

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            N ++ I     NL  + +LDLS N I   P +L  +  SL++L L  N
Sbjct: 491 CNYIKEITP-IVNLVGVKDLDLSTNQIEKCPSDLCGM-TSLRSLDLSYN 537



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 176/405 (43%), Gaps = 60/405 (14%)

Query: 26  TELIASKNLLNGMP--ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           T+++     L   P  E    L  ++ +D+  NRI  IPS I+    L +F   +N +  
Sbjct: 7   TKIVKHAKNLTEFPQEEVKKELKTVVLIDVSMNRIQEIPSQINSIPKLQKFRGNDNMIKT 66

Query: 84  LPAELGKLSKLGTLDLHSNQLKEYC-----VEACQLRLSV------------------LD 120
           LP+++  +  L TLDL SN LK +C         ++ LS+                  +D
Sbjct: 67  LPSQIN-IPSLKTLDLSSNHLKRFCKSIKLTSLTEINLSINQITKIDDDFGSLHALRFMD 125

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS-- 178
           LS N +  +P  + K+T+L  + ++ N L +  + L+   +  +LK   +++    +   
Sbjct: 126 LSINRIQSVPKHLSKLTSLTFIDISNNLLTSFPTPLLELSSLIVLKVKENKITTIPNGMS 185

Query: 179 --------EASTTKEDLITMA----TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                   + S  K D IT +    T+LSV    L +    ++ I  +I     I ++D+
Sbjct: 186 KMSNLQILDISNNKIDKITPSLCKLTKLSV----LDVSANPINEINDQIQNLTTIKEIDI 241

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV---PS 283
           S + ++ LP    S   L+ L L    +K  P A L   + +S L L N    +V   P 
Sbjct: 242 SYSPLKTLPKSFMSLVGLRKLTLQHTSVK-VPPAGLQKFTKVSELNLSNGEFEKVTELPC 300

Query: 284 DGFKDIPMLQIL-----DLSYNIAS-------LPENPPFSSLPHLQELYLRRMQLREAPT 331
            G  D+   QI+     D+ Y+I         L + P    L  ++ L L++  L   P 
Sbjct: 301 SGDIDLSCNQIVELDLPDMEYSIHKLNLGQNRLKDFPNIKCLREIKTLILQKNMLGSIPL 360

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           ++     L  LDLS NS  + P      T+L  L++S+N + +LP
Sbjct: 361 EMFTGTSLTALDLSSNSFNAFPMSITTCTNLVVLNMSNNYLDSLP 405


>gi|320165720|gb|EFW42619.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 664

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 183/423 (43%), Gaps = 71/423 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET-IGSLSRLIRLDLHQNRIL 59
           ++ LD+  N++T +  N  +  + L  L    N L+ +P +    L+ L +L LH N+I 
Sbjct: 109 LNTLDLTNNQITTVPANAFSGLSKLNTLYLYNNWLSAIPSSAFTGLTALTQLLLHNNQIT 168

Query: 60  SIPSS-ISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQ--LR 115
           ++PSS  +G  +L   Y+ NN ++ +  +    L+ L  L L++NQ+      A     +
Sbjct: 169 TVPSSAFTGLTALQLLYLYNNQIATVAIDAFSGLTALVQLYLYNNQITSISANAFSGLSK 228

Query: 116 LSVLDLSNNSLSGLPPE-IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           L+ L L+NN LS +P      +T L +LLL  N + T+ SS   G T     YL +    
Sbjct: 229 LNTLQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTVPSSAFTGLTALQFLYLYNNQIA 288

Query: 175 NEDSEASTTKEDLITM-----------ATRLSVTSKELSLEGMN--LSAIPSEIWEA-GE 220
                A +    L+ +           A   S  SK  +L   N  LSAIPS  +     
Sbjct: 289 TVAINAFSGLTALVQLRLDTNQITTVPANAFSGLSKLNTLHLYNNWLSAIPSSAFTGLTA 348

Query: 221 ITKLDLSRNSIQELPPE-------------------------LSSCASLQTLILSRNKIK 255
           +T+L L  N I  +P                            S   +L  L L  N+I 
Sbjct: 349 LTQLRLDTNQITTVPANAFSGLTALIYLYLYNNQITTVPANAFSGLTALVQLYLYNNQIT 408

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             P + LT LS+L+ L L NN +  VP++GF  +  L  L L  N I S+  N       
Sbjct: 409 TIPSSALTGLSALTQLYLYNNQITSVPANGFSGLTALTDLRLFNNTITSILANA------ 462

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG-FKNLTSLTELDLSDNNIS 373
                                L +L  LDLS N L SIP G F  LT+LT+L L +N +S
Sbjct: 463 ------------------FTGLTKLTYLDLSLNQLTSIPAGAFSGLTALTQLLLYNNWLS 504

Query: 374 ALP 376
           A+P
Sbjct: 505 AVP 507



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 204/461 (44%), Gaps = 55/461 (11%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET-IGSLSRLIRLDLHQNRILSI 61
           +L +  N++T +S N  +  + L  L  + N L+ +P +    L+ L +L L+ N+I ++
Sbjct: 207 QLYLYNNQITSISANAFSGLSKLNTLQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTV 266

Query: 62  PSS-ISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLS 117
           PSS  +G  +L   Y+ NN ++ +       L+ L  L L +NQ+      A     +L+
Sbjct: 267 PSSAFTGLTALQFLYLYNNQIATVAINAFSGLTALVQLRLDTNQITTVPANAFSGLSKLN 326

Query: 118 VLDLSNNSLSGLPPE-IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR----SRL 172
            L L NN LS +P      +T L +L L  N + T+ ++  +G T  +  YL     + +
Sbjct: 327 TLHLYNNWLSAIPSSAFTGLTALTQLRLDTNQITTVPANAFSGLTALIYLYLYNNQITTV 386

Query: 173 PENE-------------DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA- 218
           P N              +++ +T     +T  + L+    +L L    ++++P+  +   
Sbjct: 387 PANAFSGLTALVQLYLYNNQITTIPSSALTGLSALT----QLYLYNNQITSVPANGFSGL 442

Query: 219 ------------------------GEITKLDLSRNSIQELPP-ELSSCASLQTLILSRNK 253
                                    ++T LDLS N +  +P    S   +L  L+L  N 
Sbjct: 443 TALTDLRLFNNTITSILANAFTGLTKLTYLDLSLNQLTSIPAGAFSGLTALTQLLLYNNW 502

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 313
           +   P +  T L++L  L L NN +  V ++ F  +  L  L L  N  +      F+ +
Sbjct: 503 LSAVPSSAFTGLTALLYLYLYNNQITTVAANAFTGLTALVQLQLYGNQITTISASAFAGM 562

Query: 314 PHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIPE-GFKNLTSLTELDLSDNN 371
             L +LYL   ++     +    L  L +L+LS N + S+P   F  LT++T+L L +N+
Sbjct: 563 SSLVQLYLYSNRITAIFVNAFTGLTHLSLLELSNNQITSLPANAFSGLTAMTQLSLYNNS 622

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVL 412
           +SA+P        +LQAL L  N + S+        T  VL
Sbjct: 623 LSAVPSSAFTGLTALQALLLYNNQITSVAANAFTGLTALVL 663



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 151/326 (46%), Gaps = 23/326 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRIL 59
           +++L ++ N++T +  N  +  T L  L    N +  +P      L+ L++L L+ N+I 
Sbjct: 349 LTQLRLDTNQITTVPANAFSGLTALIYLYLYNNQITTVPANAFSGLTALVQLYLYNNQIT 408

Query: 60  SIPSS-ISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQ--LR 115
           +IPSS ++G  +L + Y+ NN ++++PA     L+ L  L L +N +      A     +
Sbjct: 409 TIPSSALTGLSALTQLYLYNNQITSVPANGFSGLTALTDLRLFNNTITSILANAFTGLTK 468

Query: 116 LSVLDLSNNSLSGLPP-EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           L+ LDLS N L+ +P      +T L +LLL  N L  + SS   G T             
Sbjct: 469 LTYLDLSLNQLTSIPAGAFSGLTALTQLLLYNNWLSAVPSSAFTGLTA-------LLYLY 521

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQE 233
             +++ +T   +  T  T L     +L L G  ++ I +  +     + +L L  N I  
Sbjct: 522 LYNNQITTVAANAFTGLTAL----VQLQLYGNQITTISASAFAGMSSLVQLYLYSNRITA 577

Query: 234 L-PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
           +     +    L  L LS N+I   P    + L++++ L L NN L  VPS  F  +  L
Sbjct: 578 IFVNAFTGLTHLSLLELSNNQITSLPANAFSGLTAMTQLSLYNNSLSAVPSSAFTGLTAL 637

Query: 293 QILDLSYN--IASLPENPPFSSLPHL 316
           Q L L YN  I S+  N  F+ L  L
Sbjct: 638 QALLL-YNNQITSVAAN-AFTGLTAL 661



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 87/180 (48%), Gaps = 3/180 (1%)

Query: 223 KLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
            LDL+ N I  +P    S  + L TL L  N +   P +  T L++L+ L L NN +  V
Sbjct: 111 TLDLTNNQITTVPANAFSGLSKLNTLYLYNNWLSAIPSSAFTGLTALTQLLLHNNQITTV 170

Query: 282 PSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLR 340
           PS  F  +  LQ+L L  N  +      FS L  L +LYL   Q+     +    L +L 
Sbjct: 171 PSSAFTGLTALQLLYLYNNQIATVAIDAFSGLTALVQLYLYNNQITSISANAFSGLSKLN 230

Query: 341 ILDLSQNSLQSIP-EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            L L+ N L +IP   F  LT+LT+L L +N I+ +P        +LQ L L  N + ++
Sbjct: 231 TLQLNNNWLSAIPSSAFTGLTALTQLLLYNNQITTVPSSAFTGLTALQFLYLYNNQIATV 290



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 4/129 (3%)

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
            +NP+  + S  F  + +L  LDL+ N I ++P N  FS L  L  LYL    L   P+ 
Sbjct: 91  SSNPITNIASSAFSGLSVLNTLDLTNNQITTVPAN-AFSGLSKLNTLYLYNNWLSAIPSS 149

Query: 333 ILR-LQQLRILDLSQNSLQSIP-EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
               L  L  L L  N + ++P   F  LT+L  L L +N I+ +  +      +L  L 
Sbjct: 150 AFTGLTALTQLLLHNNQITTVPSSAFTGLTALQLLYLYNNQIATVAIDAFSGLTALVQLY 209

Query: 391 LDGNPLRSI 399
           L  N + SI
Sbjct: 210 LYNNQITSI 218


>gi|344272593|ref|XP_003408116.1| PREDICTED: protein LAP2 [Loxodonta africana]
          Length = 1304

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 185/402 (46%), Gaps = 64/402 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSVGGLTSVEELDCSF 308

Query: 300 N------------------------IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
           N                        +  LP      S  ++  L+L   +L   P ++  
Sbjct: 309 NEVEALPSSIGQLTNIRTFAADHNYLQQLPTRGTIGSWKNITVLFLHSNKLETLPEEMGD 368

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 MQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 410



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 156/333 (46%), Gaps = 31/333 (9%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    LTS+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSVGGLTSVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI--RRTI 403
            ALP  +G L  +++    D N L+ +  R TI
Sbjct: 312 EALPSSIGQLT-NIRTFAADHNYLQQLPTRGTI 343



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 4/160 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC---QLRLS 117
           +P S+ G  S+ E     N + ALP+ +G+L+ + T     N L++            ++
Sbjct: 291 LPDSVGGLTSVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPTRGTIGSWKNIT 350

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
           VL L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 VLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 390


>gi|440789611|gb|ELR10917.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 911

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 212/427 (49%), Gaps = 24/427 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S L++  NK+  L  +L    T L  L  ++N L  +P  +G L+ L  LDL  N++  
Sbjct: 478 LSVLNLYMNKIESLPPDL-GKLTKLKALGLNENSLRTLPNELGQLTSLTMLDLRYNKLTE 536

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVL 119
           +P++I     L + ++  N L  LP E+G L  L  L + +NQL +   + +    L +L
Sbjct: 537 LPATIKHLVHLNKLFLRYNRLEQLPEEIGCLVSLEMLSVRNNQLHKLPRKLSMATNLKIL 596

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+S N L+     + K+  L+ L L  N L TL+     G   AL   +R  + +N+  E
Sbjct: 597 DISTNHLTKF-RSVEKLCQLKDLDLKQNKLTTLQ-----GGWGALTDLMRLDVSQNKLEE 650

Query: 180 ASTTKEDLITMAT-RLSVTSKEL----SLEGMNLS-----AIPSEIWEAGEITKLDLSRN 229
              T  +L  + T  L V + E+    SL  + L      A+P+E+     + +L L  N
Sbjct: 651 FPVTITELPRLETLDLEVLAPEIGNMTSLRSLYLGRNKLIALPAELGMLTGLRELHLKGN 710

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            ++ +PPELS+  +L+ L LS N+ + +PDA      +L+ L + +N ++++ S+    +
Sbjct: 711 RLKAIPPELSALVNLKHLDLSTNEFQTFPDARCFP-PALNSLNMSDNQMKRL-SNQIGAL 768

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L+ L+L  N +  LP     S L  L EL +   +L   P +I  +  ++ L L  N 
Sbjct: 769 TTLKQLNLDENQLDRLPGE--ISLLTGLTELRVGYNELLTLPHEIGDISLIKQLHLEHNK 826

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGT 408
           +  +P+   NL++L    ++DN ++ LP E+  +  SL  L++DGNP  ++   +   G 
Sbjct: 827 MVELPKSIGNLSALELFVVTDNLLNDLPNEMVNMT-SLSELKVDGNPFDNLPAAVRGAGG 885

Query: 409 KAVLKYL 415
           +    ++
Sbjct: 886 RDTYNFV 892



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 175/390 (44%), Gaps = 41/390 (10%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  +  +  L  L+L+ N+I S+P  +     L    +  N+L  LP ELG+L+ L
Sbjct: 465 LTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGLNENSLRTLPNELGQLTSL 524

Query: 95  GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDL  N+L E       L  L+ L L  N L  LP EIG + +L  L +  N L  L 
Sbjct: 525 TMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQLPEEIGCLVSLEMLSVRNNQLHKLP 584

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
             L       +L    + L +    E     +DL     +L+      +L+G        
Sbjct: 585 RKLSMATNLKILDISTNHLTKFRSVEKLCQLKDLDLKQNKLT------TLQGG------- 631

Query: 214 EIWEA-GEITKLDLSRNSIQELP------------------PELSSCASLQTLILSRNKI 254
             W A  ++ +LD+S+N ++E P                  PE+ +  SL++L L RNK+
Sbjct: 632 --WGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEVLAPEIGNMTSLRSLYLGRNKL 689

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 313
              P A L  L+ L  L L  N L+ +P +    +  L+ LDLS N   + P+   F   
Sbjct: 690 IALP-AELGMLTGLRELHLKGNRLKAIPPE-LSALVNLKHLDLSTNEFQTFPDARCFP-- 745

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
           P L  L +   Q++     I  L  L+ L+L +N L  +P     LT LTEL +  N + 
Sbjct: 746 PALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPGEISLLTGLTELRVGYNELL 805

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            LP E+G +   ++ L L+ N +  + ++I
Sbjct: 806 TLPHEIGDIS-LIKQLHLEHNKMVELPKSI 834



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 4/122 (3%)

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
           S+ E+    S   LQ   LRR +L   P+++  ++ L +L+L  N ++S+P     LT L
Sbjct: 442 SMAEDSGSGSAGGLQSYDLRRKELTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKL 501

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI--LDRGTKAVLKYLK-DKI 419
             L L++N++  LP ELG L  SL  L L  N L  +  TI  L    K  L+Y + +++
Sbjct: 502 KALGLNENSLRTLPNELGQLT-SLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQL 560

Query: 420 PE 421
           PE
Sbjct: 561 PE 562


>gi|449704403|gb|EMD44652.1| leucinerich repeat-containing protein [Entamoeba histolytica KU27]
          Length = 861

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 208/469 (44%), Gaps = 82/469 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N L     ++    T LTE+  S N +  + +  GSL  L  +DL  NRI S
Sbjct: 76  LKTLDLSSNHLKRFCKSI--KLTSLTEINLSINQITKIDDDFGSLHALRFMDLSINRIQS 133

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAEL-----------------------GKLSKLGTL 97
           +P  +S   SL    + NN L++ P  L                        K+S L  L
Sbjct: 134 VPKHLSKLTSLTFIDISNNLLTSFPTPLLELSSLIVLKVKENKITTIPNGMSKMSNLQIL 193

Query: 98  DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           D+ +N++ +     C+L +LSVLD+S N ++ +  +I  +TT++++ ++ +PL+TL  S 
Sbjct: 194 DISNNKIDKITPSLCKLTKLSVLDVSANPINEINDQIQNLTTIKEIDISYSPLKTLPKSF 253

Query: 157 ---------------VNGPTPALLKYLR--------------SRLPENEDSEASTTK--- 184
                          V  P   L K+ +              + LP + D + S  +   
Sbjct: 254 MSLVGLRKLTLQHTSVKVPPAGLQKFTKVSELNLSNGEFEKVTELPCSGDIDLSCNQIVE 313

Query: 185 ---EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGEITKLDL 226
               D+     +L++                 K L L+   L +IP E++    +T LDL
Sbjct: 314 LDLPDMEYSIHKLNLGQNRLKDFPNIKCLREIKTLILQKNMLGSIPLEMFTGTSLTALDL 373

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S NS    P  +++C +L  L +S N +   PD   +  + L  L L  N + ++P +  
Sbjct: 374 SSNSFNAFPMSITTCTNLVVLNMSNNYLDSLPDISYSCFAKLEALLLGINIIDRLP-ETM 432

Query: 287 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
            ++  L  L L +N ++ +PE+    S+  L EL+L   Q+ E P     L  L IL+LS
Sbjct: 433 SELTNLTTLHLEHNKLSKIPES--LFSMTKLVELFLNCNQIPELPEKFSLLTNLEILELS 490

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            N ++ I     NL  + +LDLS N I   P +L  +  SL++L L  N
Sbjct: 491 CNYIKEITP-IVNLVGVKDLDLSTNQIEKCPSDLCGM-TSLRSLDLSYN 537



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 176/405 (43%), Gaps = 60/405 (14%)

Query: 26  TELIASKNLLNGMP--ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           T+++     L   P  E    L  ++ +D+  NRI  IPS I+    L +F   +N +  
Sbjct: 7   TKIVKHAKNLTEFPQEEVKKELKTVVLIDVSMNRIQEIPSQINSIPKLQKFRGNDNMIKT 66

Query: 84  LPAELGKLSKLGTLDLHSNQLKEYC-----VEACQLRLSV------------------LD 120
           LP+++  +  L TLDL SN LK +C         ++ LS+                  +D
Sbjct: 67  LPSQIN-IPSLKTLDLSSNHLKRFCKSIKLTSLTEINLSINQITKIDDDFGSLHALRFMD 125

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS-- 178
           LS N +  +P  + K+T+L  + ++ N L +  + L+   +  +LK   +++    +   
Sbjct: 126 LSINRIQSVPKHLSKLTSLTFIDISNNLLTSFPTPLLELSSLIVLKVKENKITTIPNGMS 185

Query: 179 --------EASTTKEDLITMA----TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                   + S  K D IT +    T+LSV    L +    ++ I  +I     I ++D+
Sbjct: 186 KMSNLQILDISNNKIDKITPSLCKLTKLSV----LDVSANPINEINDQIQNLTTIKEIDI 241

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV---PS 283
           S + ++ LP    S   L+ L L    +K  P A L   + +S L L N    +V   P 
Sbjct: 242 SYSPLKTLPKSFMSLVGLRKLTLQHTSVK-VPPAGLQKFTKVSELNLSNGEFEKVTELPC 300

Query: 284 DGFKDIPMLQIL-----DLSYNIAS-------LPENPPFSSLPHLQELYLRRMQLREAPT 331
            G  D+   QI+     D+ Y+I         L + P    L  ++ L L++  L   P 
Sbjct: 301 SGDIDLSCNQIVELDLPDMEYSIHKLNLGQNRLKDFPNIKCLREIKTLILQKNMLGSIPL 360

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           ++     L  LDLS NS  + P      T+L  L++S+N + +LP
Sbjct: 361 EMFTGTSLTALDLSSNSFNAFPMSITTCTNLVVLNMSNNYLDSLP 405


>gi|218440192|ref|YP_002378521.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
 gi|218172920|gb|ACK71653.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
          Length = 867

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 164/344 (47%), Gaps = 42/344 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL   ++ ++P  I     L    + NN L+ LP ++GKL KL +L+L  NQL     E
Sbjct: 21  LDLSFKKLETLPPQIEQLTHLRYLDLRNNKLTTLPPQIGKLKKLTSLNLTDNQLSALPPE 80

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL  LS L LS N L+ LP EIG++T L +L L+ N L TL ++L +     L+   R
Sbjct: 81  IGQLNNLSRLHLSYNKLTNLPEEIGQLTHLSELYLSHNFLETLPTTLNH-----LVNINR 135

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
             L  N+ +      + LI+++           L    L+ +P EI +   + +LDL  N
Sbjct: 136 LSLSYNQFTSLPPQIKGLISLSW--------WDLNNNQLTTLPPEIGQLKSLNQLDLGYN 187

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKD 288
            +  LPPE+     L +L +S N++   P  I   L +L  L L NN L  +P + GF  
Sbjct: 188 QLTTLPPEIGELYRLTSLDVSYNQLISLPPEI-QFLINLDSLTLSNNQLATLPPEIGF-- 244

Query: 289 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
           +  L  L+LSYN                        QL   P +I +L +L    LS N 
Sbjct: 245 LSNLISLNLSYN------------------------QLTSIPPEIGQLTKLIQFRLSHNK 280

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
           ++++P   + LT LT L L +N + ALP EL  L    +  +LD
Sbjct: 281 IETLPPEIRCLTQLTSLMLKNNQLLALPLELIQLVQFFKLTQLD 324



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 131/275 (47%), Gaps = 38/275 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S+L +  NKLT L    I   T L+EL  S N L  +P T+  L  + RL L  N+  S
Sbjct: 87  LSRLHLSYNKLTNLPEE-IGQLTHLSELYLSHNFLETLPTTLNHLVNINRLSLSYNQFTS 145

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I G  SL+ + + NN L+ LP E+G+L  L  LDL  NQL     E  +L RL+ L
Sbjct: 146 LPPQIKGLISLSWWDLNNNQLTTLPPEIGQLKSLNQLDLGYNQLTTLPPEIGELYRLTSL 205

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+S N L  LPPEI  +  L  L L+ N L TL         P  + +L           
Sbjct: 206 DVSYNQLISLPPEIQFLINLDSLTLSNNQLATL---------PPEIGFL----------- 245

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                 +LI+           L+L    L++IP EI +  ++ +  LS N I+ LPPE+ 
Sbjct: 246 -----SNLIS-----------LNLSYNQLTSIPPEIGQLTKLIQFRLSHNKIETLPPEIR 289

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
               L +L+L  N++   P  ++  +      +LD
Sbjct: 290 CLTQLTSLMLKNNQLLALPLELIQLVQFFKLTQLD 324



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 144/310 (46%), Gaps = 22/310 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  NKLT L    I     LT L  + N L+ +P  IG L+ L RL L  N++ +
Sbjct: 41  LRYLDLRNNKLTTLPPQ-IGKLKKLTSLNLTDNQLSALPPEIGQLNNLSRLHLSYNKLTN 99

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I     L+E Y+ +N L  LP  L  L  +  L L  NQ      +   L  LS  
Sbjct: 100 LPEEIGQLTHLSELYLSHNFLETLPTTLNHLVNINRLSLSYNQFTSLPPQIKGLISLSWW 159

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL+NN L+ LPPEIG++ +L +L L  N L TL       P    L  L S         
Sbjct: 160 DLNNNQLTTLPPEIGQLKSLNQLDLGYNQLTTL------PPEIGELYRLTS--------- 204

Query: 180 ASTTKEDLITM--ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
              +   LI++    +  +    L+L    L+ +P EI     +  L+LS N +  +PPE
Sbjct: 205 LDVSYNQLISLPPEIQFLINLDSLTLSNNQLATLPPEIGFLSNLISLNLSYNQLTSIPPE 264

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI--L 295
           +     L    LS NKI+  P  I   L+ L+ L L NN L  +P +  + +   ++  L
Sbjct: 265 IGQLTKLIQFRLSHNKIETLPPEI-RCLTQLTSLMLKNNQLLALPLELIQLVQFFKLTQL 323

Query: 296 DLSYNIASLP 305
           D+  N+ ++P
Sbjct: 324 DVQENLLTIP 333



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 136/299 (45%), Gaps = 42/299 (14%)

Query: 102 NQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 161
           ++L +   +A + +   LDLS   L  LPP+I ++T LR L L  N L TL       P 
Sbjct: 4   DELLQIIQQAIEEKAETLDLSFKKLETLPPQIEQLTHLRYLDLRNNKLTTL------PPQ 57

Query: 162 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 221
              LK L S                              L+L    LSA+P EI +   +
Sbjct: 58  IGKLKKLTS------------------------------LNLTDNQLSALPPEIGQLNNL 87

Query: 222 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
           ++L LS N +  LP E+     L  L LS N ++  P   L  L +++ L L  N    +
Sbjct: 88  SRLHLSYNKLTNLPEEIGQLTHLSELYLSHNFLETLP-TTLNHLVNINRLSLSYNQFTSL 146

Query: 282 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
           P    K +  L   DL+ N + +LP  P    L  L +L L   QL   P +I  L +L 
Sbjct: 147 PPQ-IKGLISLSWWDLNNNQLTTLP--PEIGQLKSLNQLDLGYNQLTTLPPEIGELYRLT 203

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            LD+S N L S+P   + L +L  L LS+N ++ LPPE+G L  +L +L L  N L SI
Sbjct: 204 SLDVSYNQLISLPPEIQFLINLDSLTLSNNQLATLPPEIGFLS-NLISLNLSYNQLTSI 261



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 73/137 (53%), Gaps = 6/137 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N+L  L    I     L  L  S N L  +P  IG LS LI L+L  N++ S
Sbjct: 202 LTSLDVSYNQLISLPPE-IQFLINLDSLTLSNNQLATLPPEIGFLSNLISLNLSYNQLTS 260

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RL 116
           IP  I     L +F + +N +  LP E+  L++L +L L +NQL    +E  QL    +L
Sbjct: 261 IPPEIGQLTKLIQFRLSHNKIETLPPEIRCLTQLTSLMLKNNQLLALPLELIQLVQFFKL 320

Query: 117 SVLDLSNNSLSGLPPEI 133
           + LD+  N L+ +PPEI
Sbjct: 321 TQLDVQENLLT-IPPEI 336


>gi|297288911|ref|XP_001101596.2| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387 homolog [Macaca mulatta]
          Length = 824

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 178/397 (44%), Gaps = 36/397 (9%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
            S N ++ +P+ I  L  + +L  + N I + PS +    +L    +G N L  +P  L 
Sbjct: 221 VSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDTLP 280

Query: 90  KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
            L  L  L+L  NQL  +    C L +L  LDL+ N +S LP EI ++  L  LLL  N 
Sbjct: 281 SLKYLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLLDHNK 340

Query: 149 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS-KELSLEGMN 207
           L  L   +       LLK    +L +N+    S   E+   +  R+ + + ++L +   N
Sbjct: 341 LTFLAVEIF-----QLLKIKELQLADNKLEVISHKIENFREL--RILINNLRKLHVNRNN 393

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           +  I   I     I  L+ S N I  +P E+ +C  +  + L+ NKI  +P   L +L S
Sbjct: 394 MVKITDSISHLNNICSLEFSGNIIAGIPIEIKNCQKIIKIELNYNKIMYFPLG-LCALDS 452

Query: 268 LSCLKLDNNPLRQVPSD----------------------GFKDIPMLQILDLSYN-IASL 304
           L  L ++ N + ++P+D                       F  +  L+ LDL  N I  +
Sbjct: 453 LYYLSVNGNYISEIPADISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKI 512

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
           P     S++  L  L L   +    P ++  L+ LR+LDLS+N LQ I     NL  + +
Sbjct: 513 P--ASISNMISLHVLILCCNKFETFPRELCTLENLRVLDLSENQLQKISSDICNLKGIQK 570

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
           L+ S N     P EL  L+ SL+ L +     R + R
Sbjct: 571 LNFSSNQFIHFPIELCQLQ-SLEQLNISQIKGRKLTR 606



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 192/432 (44%), Gaps = 71/432 (16%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           KN L  +P+T+ SL  L  L+L  N++   P ++     L    +  N +S+LP E+ +L
Sbjct: 269 KNKLRHIPDTLPSLKYLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIREL 328

Query: 92  SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGK-------MTTLRKLL 143
             L TL L  N+L    VE  QL ++  L L++N L  +  +I         +  LRKL 
Sbjct: 329 KNLETLLLDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILINNLRKLH 388

Query: 144 LTGNPLRTLRSSLVNGPTPALLKY---LRSRLPENEDSEASTTKEDL---ITMATRLSVT 197
           +  N +  +  S+ +      L++   + + +P    +     K +L     M   L + 
Sbjct: 389 VNRNNMVKITDSISHLNNICSLEFSGNIIAGIPIEIKNCQKIIKIELNYNKIMYFPLGLC 448

Query: 198 SKE----LSLEGMNLSAIPSEIWEAGEITKL-----------------------DLSRNS 230
           + +    LS+ G  +S IP++I  + ++  L                       DL +N 
Sbjct: 449 ALDSLYYLSVNGNYISEIPADISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQ 508

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD------ 284
           I+++P  +S+  SL  LIL  NK + +P  + T L +L  L L  N L+++ SD      
Sbjct: 509 IKKIPASISNMISLHVLILCCNKFETFPRELCT-LENLRVLDLSENQLQKISSDICNLKG 567

Query: 285 ---------GFKDIPM-------LQILDLSY----NIASLPENPPFSSLPHLQELYLRRM 324
                     F   P+       L+ L++S      +  LP     S++  L+EL +   
Sbjct: 568 IQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLP--GELSNMTQLKELDISNN 625

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
            +RE P +I  L+ L  L    N +  IP    +L  L +L+LS NN++ALP  +  L  
Sbjct: 626 AIREIPRNIGELRNLVSLHAYNNQISYIPPSLLSLNDLQQLNLSGNNLTALPSAIYNL-F 684

Query: 385 SLQALRLDGNPL 396
           SL+ +  D NPL
Sbjct: 685 SLKEINFDDNPL 696



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 176/379 (46%), Gaps = 34/379 (8%)

Query: 6   VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS-------LSRLIRLDLHQNRI 58
           ++ NKLT L+   I     + EL  + N L  +   I +       ++ L +L +++N +
Sbjct: 336 LDHNKLTFLAVE-IFQLLKIKELQLADNKLEVISHKIENFRELRILINNLRKLHVNRNNM 394

Query: 59  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 117
           + I  SIS   ++       N ++ +P E+    K+  ++L+ N++  + +  C L  L 
Sbjct: 395 VKITDSISHLNNICSLEFSGNIIAGIPIEIKNCQKIIKIELNYNKIMYFPLGLCALDSLY 454

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPE 174
            L ++ N +S +P +I     L  L L+ N L        SL+N      LKYL   L +
Sbjct: 455 YLSVNGNYISEIPADISFSKQLLHLELSENKLLIFSEHFCSLIN------LKYLD--LGK 506

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
           N+  +   +  ++I++   +   +K            P E+     +  LDLS N +Q++
Sbjct: 507 NQIKKIPASISNMISLHVLILCCNK--------FETFPRELCTLENLRVLDLSENQLQKI 558

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
             ++ +   +Q L  S N+   +P  +  L SL  L+  ++    L ++P +   ++  L
Sbjct: 559 SSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGE-LSNMTQL 617

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           + LD+S N I  +P N     L +L  L+    Q+   P  +L L  L+ L+LS N+L +
Sbjct: 618 KELDISNNAIREIPRN--IGELRNLVSLHAYNNQISYIPPSLLSLNDLQQLNLSGNNLTA 675

Query: 352 IPEGFKNLTSLTELDLSDN 370
           +P    NL SL E++  DN
Sbjct: 676 LPSAIYNLFSLKEINFDDN 694



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 123/280 (43%), Gaps = 36/280 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L V GN ++ +  ++  S  +L  L  S+N L    E   SL  L  LDL +N+I  IP+
Sbjct: 456 LSVNGNYISEIPADISFSKQLL-HLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPA 514

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           SIS   SL    +  N     P EL  L  L  LDL  NQL++   + C L+ +  L+ S
Sbjct: 515 SISNMISLHVLILCCNKFETFPRELCTLENLRVLDLSENQLQKISSDICNLKGIQKLNFS 574

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N     P E+ ++ +L +L ++    R L                 +RLP         
Sbjct: 575 SNQFIHFPIELCQLQSLEQLNISQIKGRKL-----------------TRLPGE------- 610

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                ++  T+L    KEL +    +  IP  I E   +  L    N I  +PP L S  
Sbjct: 611 -----LSNMTQL----KELDISNNAIREIPRNIGELRNLVSLHAYNNQISYIPPSLLSLN 661

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
            LQ L LS N +   P AI  +L SL  +  D+NPL + P
Sbjct: 662 DLQQLNLSGNNLTALPSAIY-NLFSLKEINFDDNPLLRPP 700



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 136/297 (45%), Gaps = 26/297 (8%)

Query: 111 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 170
            C+   +V +L    L   P +I K+  ++ L L  N ++T + +     +  LL     
Sbjct: 142 TCKDNFTV-NLEAKGLQEFPKDILKIKYVKHLYLDKNQIKTFQGA----DSGDLLGLEIL 196

Query: 171 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
            L EN  S   +     I +   L +    L++   ++S IP EI + G I +L    N 
Sbjct: 197 SLQENGLSSLPSE----IQLLHNLRI----LNVSHNHISHIPKEISQLGNIRQLFFYNNY 248

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           I+  P +L    +L+ L L +NK++  PD  L SL  L  L L+ N L   P      +P
Sbjct: 249 IENFPSDLECLGNLEILSLGKNKLRHIPDT-LPSLKYLRVLNLEYNQLTIFPK-ALCFLP 306

Query: 291 MLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
            L  LDL+ N I+SLP+      L +L+ L L   +L     +I +L +++ L L+ N L
Sbjct: 307 KLISLDLTGNLISSLPK--EIRELKNLETLLLDHNKLTFLAVEIFQLLKIKELQLADNKL 364

Query: 350 QSIPEGFKN-------LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           + I    +N       + +L +L ++ NN+  +   +  L  ++ +L   GN +  I
Sbjct: 365 EVISHKIENFRELRILINNLRKLHVNRNNMVKITDSISHLN-NICSLEFSGNIIAGI 420



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 1/108 (0%)

Query: 6   VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
           ++G KLT L   L ++ T L EL  S N +  +P  IG L  L+ L  + N+I  IP S+
Sbjct: 599 IKGRKLTRLPGEL-SNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQISYIPPSL 657

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 113
                L +  +  N L+ALP+ +  L  L  ++   N L    +E C+
Sbjct: 658 LSLNDLQQLNLSGNNLTALPSAIYNLFSLKEINFDDNPLLRPPMEICK 705


>gi|421137163|ref|ZP_15597251.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410018657|gb|EKO85494.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
          Length = 313

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 147/320 (45%), Gaps = 48/320 (15%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  IG    L +L+L  N++ S+P  I    +L    +  N  ++LP E+G+L  L
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNL 65

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDL  NQ      E  QL+ L VL+L+ N L+ LP EIG++  L +L L GN   +L 
Sbjct: 66  ERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTSLP 125

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
             +        L+ LR                               L+L G  L+++P 
Sbjct: 126 KEI------GQLQNLRV------------------------------LNLAGNQLTSLPK 149

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           EI +   + +LDL+ N    LP E+     L+ L L  N+   +P  I     SL  L+L
Sbjct: 150 EIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQ-QSLKWLRL 208

Query: 274 DNNPLRQVPSDGFKDIPMLQILDL----SYNIASLPENPPFSSLPHLQELYLRRMQLREA 329
             + L+ +P    K+I +LQ L      S  + SLP+      L +L EL L+  +L+  
Sbjct: 209 SGDQLKTLP----KEILLLQNLQSLHLDSNQLTSLPK--EIGQLQNLFELNLQDNKLKTL 262

Query: 330 PTDILRLQQLRILDLSQNSL 349
           P +I +LQ+L +L L  NS 
Sbjct: 263 PKEIGQLQKLEVLRLYSNSF 282



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 127/277 (45%), Gaps = 16/277 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL+++GN+LT L    I     L  L  + N    +P+ IG L  L RLDL  N+  S
Sbjct: 19  LEKLNLDGNQLTSLPKE-IGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTS 77

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    +  N L++LP E+G+L  L  LDL  NQ      E  QL+ L VL
Sbjct: 78  LPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVL 137

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L+ N L+ LP EIG++  L +L L GN   +L         P  +  L+     N D  
Sbjct: 138 NLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSL---------PKEIGQLQKLEALNLDHN 188

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             T    +     R   + K L L G  L  +P EI     +  L L  N +  LP E+ 
Sbjct: 189 RFT----IFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIG 244

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
              +L  L L  NK+K  P  I   L  L  L+L +N
Sbjct: 245 QLQNLFELNLQDNKLKTLPKEI-GQLQKLEVLRLYSN 280



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 146/321 (45%), Gaps = 43/321 (13%)

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 134
           MG + L +LP  +G    L  L+L  NQL     E  QL+ L VL+L+ N  + LP EIG
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
           ++  L +L L GN   +L   +        L+ LR                         
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEI------GQLQNLRV------------------------ 90

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
                 L+L G  L+++P EI +   + +LDL  N    LP E+    +L+ L L+ N++
Sbjct: 91  ------LNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQL 144

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 313
              P  I   L +L  L L  N    +P +    +  L+ L+L +N     P+       
Sbjct: 145 TSLPKEI-GQLQNLERLDLAGNQFTSLPKE-IGQLQKLEALNLDHNRFTIFPK--EIRQQ 200

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
             L+ L L   QL+  P +IL LQ L+ L L  N L S+P+    L +L EL+L DN + 
Sbjct: 201 QSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIGQLQNLFELNLQDNKLK 260

Query: 374 ALPPELGLLEPSLQALRLDGN 394
            LP E+G L+  L+ LRL  N
Sbjct: 261 TLPKEIGQLQ-KLEVLRLYSN 280



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 6/207 (2%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L+L+G  L+++P EI +   +  L+L+ N    LP E+    +L+ L L  N+    P
Sbjct: 20  EKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSLP 79

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
             I   L +L  L L  N L  +P +    +  L+ LDL  N   SLP+      L +L+
Sbjct: 80  KEI-GQLQNLRVLNLAGNQLTSLPKE-IGQLQNLERLDLDGNQFTSLPK--EIGQLQNLR 135

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L L   QL   P +I +LQ L  LDL+ N   S+P+    L  L  L+L  N  +  P 
Sbjct: 136 VLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPK 195

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTIL 404
           E+   + SL+ LRL G+ L+++ + IL
Sbjct: 196 EIRQ-QQSLKWLRLSGDQLKTLPKEIL 221



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
           +L   P  I   Q L  L+L  N L S+P+    L +L  L+L+ N  ++LP E+G L+ 
Sbjct: 5   ELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQ- 63

Query: 385 SLQALRLDGNPLRSIRRTI 403
           +L+ L LDGN   S+ + I
Sbjct: 64  NLERLDLDGNQFTSLPKEI 82


>gi|73669795|ref|YP_305810.1| leucine-rich repeat-containing protein [Methanosarcina barkeri str.
           Fusaro]
 gi|72396957|gb|AAZ71230.1| leucine-rich-repeat protein [Methanosarcina barkeri str. Fusaro]
          Length = 863

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 161/345 (46%), Gaps = 71/345 (20%)

Query: 81  LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 139
           L++LP E+ +L     L +  NQL     E  +L+ L  LD+S N L+ LPP+I K+  L
Sbjct: 28  LTSLPPEISELKNFTKLYISYNQLTSLPPEISELKNLKQLDISYNQLTSLPPDISKLKNL 87

Query: 140 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 199
            +L +  N L +L       P  + LK L                              K
Sbjct: 88  TQLNIRNNQLTSL------PPGISKLKNL------------------------------K 111

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           +L +    L+++PS I E  ++T+L +S+N +  LPPE+S   +L+ L +SRN++   P 
Sbjct: 112 QLDISENQLTSLPSGITELKDLTQLSISKNQLTSLPPEISKLKNLKQLSISRNQLTSLPP 171

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 319
            IL  L SL+ + +  N L  +P +                          S L  L +L
Sbjct: 172 EIL-ELKSLTQINIYENQLTSLPHE-------------------------ISELKSLTQL 205

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            +   QL   P++I  L+ L  LD+S+N L S+P     L +LT+LD+S N +++LPPE+
Sbjct: 206 SISGNQLTSLPSEIANLESLTQLDISRNQLTSLPLEITELKNLTQLDISSNKLTSLPPEI 265

Query: 380 GLLEPSLQ--------ALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
             L   ++         + L+GNPL      I+ +G +AV+ Y K
Sbjct: 266 LKLGIDIEWGNNSAEKGIFLEGNPLEKPPIEIVKQGREAVINYFK 310



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 140/275 (50%), Gaps = 26/275 (9%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+     T+L  S N L  +P  I  L  L +LD+  N++ S+P  IS   +L +  + N
Sbjct: 35  ISELKNFTKLYISYNQLTSLPPEISELKNLKQLDISYNQLTSLPPDISKLKNLTQLNIRN 94

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L++LP  + KL  L  LD+  NQL        +L+ L+ L +S N L+ LPPEI K+ 
Sbjct: 95  NQLTSLPPGISKLKNLKQLDISENQLTSLPSGITELKDLTQLSISKNQLTSLPPEISKLK 154

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L++L ++ N L +L         P +L+ L+S       ++ +  +  L ++   +S  
Sbjct: 155 NLKQLSISRNQLTSL--------PPEILE-LKSL------TQINIYENQLTSLPHEISEL 199

Query: 198 SK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
               +LS+ G  L+++PSEI     +T+LD+SRN +  LP E++   +L  L +S NK+ 
Sbjct: 200 KSLTQLSISGNQLTSLPSEIANLESLTQLDISRNQLTSLPLEITELKNLTQLDISSNKLT 259

Query: 256 DWPDAILT--------SLSSLSCLKLDNNPLRQVP 282
             P  IL         + S+   + L+ NPL + P
Sbjct: 260 SLPPEILKLGIDIEWGNNSAEKGIFLEGNPLEKPP 294



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 123/236 (52%), Gaps = 27/236 (11%)

Query: 186 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 245
           DLI  A R  VT+  LS +  NL+++P EI E    TKL +S N +  LPPE+S   +L+
Sbjct: 8   DLIRRAQRNKVTALRLSYK--NLTSLPPEISELKNFTKLYISYNQLTSLPPEISELKNLK 65

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASL 304
            L +S N++   P  I + L +L+ L + NN L  +P  G   +  L+ LD+S N + SL
Sbjct: 66  QLDISYNQLTSLPPDI-SKLKNLTQLNIRNNQLTSLPP-GISKLKNLKQLDISENQLTSL 123

Query: 305 PEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
           P                       P  S L +L++L + R QL   P +IL L+ L  ++
Sbjct: 124 PSGITELKDLTQLSISKNQLTSLPPEISKLKNLKQLSISRNQLTSLPPEILELKSLTQIN 183

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           + +N L S+P     L SLT+L +S N +++LP E+  LE SL  L +  N L S+
Sbjct: 184 IYENQLTSLPHEISELKSLTQLSISGNQLTSLPSEIANLE-SLTQLDISRNQLTSL 238



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 118/239 (49%), Gaps = 38/239 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+LT L  + I+    LT+L    N L  +P  I  L  L +LD+ +N++ S
Sbjct: 64  LKQLDISYNQLTSLPPD-ISKLKNLTQLNIRNNQLTSLPPGISKLKNLKQLDISENQLTS 122

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +PS I+    L +  +  N L++LP E+ KL  L  L +  NQL     E  +L+ L+ +
Sbjct: 123 LPSGITELKDLTQLSISKNQLTSLPPEISKLKNLKQLSISRNQLTSLPPEILELKSLTQI 182

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           ++  N L+ LP EI ++ +L +L ++GN L +L S + N                     
Sbjct: 183 NIYENQLTSLPHEISELKSLTQLSISGNQLTSLPSEIAN--------------------- 221

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                   +   T+L ++  +       L+++P EI E   +T+LD+S N +  LPPE+
Sbjct: 222 --------LESLTQLDISRNQ-------LTSLPLEITELKNLTQLDISSNKLTSLPPEI 265



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 22/204 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  N+LT L    I+    L +L  S+N L  +P  I  L  L ++++++N++ S
Sbjct: 133 LTQLSISKNQLTSLPPE-ISKLKNLKQLSISRNQLTSLPPEILELKSLTQINIYENQLTS 191

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  IS   SL +  +  N L++LP+E+  L  L  LD+  NQL    +E  +L+ L+ L
Sbjct: 192 LPHEISELKSLTQLSISGNQLTSLPSEIANLESLTQLDISRNQLTSLPLEITELKNLTQL 251

Query: 120 DLSNNSLSGLPPEI---------GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 170
           D+S+N L+ LPPEI         G  +  + + L GNPL      +V     A++ Y +S
Sbjct: 252 DISSNKLTSLPPEILKLGIDIEWGNNSAEKGIFLEGNPLEKPPIEIVKQGREAVINYFKS 311

Query: 171 ----RLPENE-------DSEASTT 183
               + P NE       D EA  T
Sbjct: 312 LEGEKKPLNEVKVLLVGDGEAGKT 335



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 29/190 (15%)

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           +  ++T L LS  ++  LPPE+S   +   L +S N++   P  I    S L  LK    
Sbjct: 14  QRNKVTALRLSYKNLTSLPPEISELKNFTKLYISYNQLTSLPPEI----SELKNLKQ--- 66

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
                             LD+SYN + SLP  P  S L +L +L +R  QL   P  I +
Sbjct: 67  ------------------LDISYNQLTSLP--PDISKLKNLTQLNIRNNQLTSLPPGISK 106

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L+ L+ LD+S+N L S+P G   L  LT+L +S N +++LPPE+  L+ +L+ L +  N 
Sbjct: 107 LKNLKQLDISENQLTSLPSGITELKDLTQLSISKNQLTSLPPEISKLK-NLKQLSISRNQ 165

Query: 396 LRSIRRTILD 405
           L S+   IL+
Sbjct: 166 LTSLPPEILE 175


>gi|345308702|ref|XP_001520661.2| PREDICTED: protein LAP2 [Ornithorhynchus anatinus]
          Length = 1559

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 189/410 (46%), Gaps = 62/410 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 114 VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 173

Query: 84  LPAELGKLSKLGTLDLHSNQLKEYC--VEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 174 LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 233

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE SE
Sbjct: 234 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFSE 288

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  LS IP  +    ++T LD+S+NSI+ +   +S
Sbjct: 289 VPEVLEQLSGL--------KEFWMDGNRLSFIPGFLGNLKQLTYLDVSKNSIEMVEEGVS 340

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C SLQ L+LS N ++  P++I  SL  L+ LK+D N L  +P D    +  ++ LD S+
Sbjct: 341 GCESLQDLLLSSNSLQQLPESI-GSLKKLTTLKIDENQLMYLP-DSIGGLISIEELDCSF 398

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I + P +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 399 NEIEAFPPSVGQLTNIRTFAADHNFLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQ 458

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
           +L++++LS N L+++P  F  L  LT + LSDN    L P     +P  Q
Sbjct: 459 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIPLQKETDPETQ 508



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 118/270 (43%), Gaps = 43/270 (15%)

Query: 18  LIASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 74
           L A++  LT+L      +N L  +P+T+  L++L RLDL  N    +P  +     L EF
Sbjct: 243 LPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEF 302

Query: 75  YMGNNALSALPAELGKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPE 132
           +M  N LS +P  LG L +L  LD+  N ++  E  V  C+  L  L LS+NSL  LP  
Sbjct: 303 WMDGNRLSFIPGFLGNLKQLTYLDVSKNSIEMVEEGVSGCE-SLQDLLLSSNSLQQLPES 361

Query: 133 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 192
           IG +  L  L +  N L  L  S+                              LI++  
Sbjct: 362 IGSLKKLTTLKIDENQLMYLPDSIGG----------------------------LISI-- 391

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
                 +EL      + A P  + +   I       N +Q+LPPE+ S  ++  L L  N
Sbjct: 392 ------EELDCSFNEIEAFPPSVGQLTNIRTFAADHNFLQQLPPEIGSWKNVTVLFLHSN 445

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           K++  P+  +  +  L  + L +N L+ +P
Sbjct: 446 KLETLPEE-MGDMQKLKVINLSDNRLKNLP 474



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 122/267 (45%), Gaps = 46/267 (17%)

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
           KMTT R L +   P R LR                              +E+ +T     
Sbjct: 90  KMTTKRNLFVRLVPCRCLRG-----------------------------EEETVTT---- 116

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
                 L     +L  +P EI+   + + +L L  N I+ELP +L +C SL  L L  N 
Sbjct: 117 ------LDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDND 170

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 312
           +   P A + +L +L  L +  N +++ P +  K+  +L I++ S N I+ LP+   FS 
Sbjct: 171 LTTLP-ASIANLINLRELDVSKNGIQEFPEN-IKNCKVLTIVEASVNPISKLPDG--FSQ 226

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L +L +LYL    L   P +  RL +L+IL+L +N L+ +P+    LT L  LDL  N  
Sbjct: 227 LLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEF 286

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
           S +P  L  L   L+   +DGN L  I
Sbjct: 287 SEVPEVLEQLS-GLKEFWMDGNRLSFI 312



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 4/154 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ + +   ++   + L E     N L+ +P  +G+L +L  LD+ +N I  
Sbjct: 276 LERLDLGSNEFSEVPE-VLEQLSGLKEFWMDGNRLSFIPGFLGNLKQLTYLDVSKNSIEM 334

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-- 118
           +   +SGC SL +  + +N+L  LP  +G L KL TL +  NQL  Y  ++    +S+  
Sbjct: 335 VEEGVSGCESLQDLLLSSNSLQQLPESIGSLKKLTTLKIDENQLM-YLPDSIGGLISIEE 393

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           LD S N +   PP +G++T +R      N L+ L
Sbjct: 394 LDCSFNEIEAFPPSVGQLTNIRTFAADHNFLQQL 427


>gi|429961718|gb|ELA41263.1| hypothetical protein VICG_01752, partial [Vittaforma corneae ATCC
           50505]
          Length = 342

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 167/363 (46%), Gaps = 48/363 (13%)

Query: 58  ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 116
           I SI S+I     L +  +  N L +LP E+G+L  L TLDL+ N L+    E   L  L
Sbjct: 8   ITSIDSNIKRLVKLEKLDLSVNKLESLPPEIGRLVNLKTLDLNINNLETLPSEIGDLVNL 67

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 176
             L L+NN+L  LP EIGK+T L+ L L  N L TL S +        LK LR+      
Sbjct: 68  QKLYLNNNNLETLPSEIGKLTNLQDLHLIDNNLETLPSEI------GELKRLRN------ 115

Query: 177 DSEASTTKEDLITMATRLS--VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
                 +  +L  +  ++   V  +EL L G N+ A+PSEI +   +  L L+ N ++  
Sbjct: 116 ---LHLSNNNLKILLPKIGGLVNLRELYLSGNNIEALPSEIGDLVNLRNLHLNNNKLKSF 172

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P  +    +LQ L L+ NK+K  P  I T L +L  L L++N                  
Sbjct: 173 PVVIGKLTNLQELHLNGNKLKSLPSEIRT-LKNLEILYLNDNEFE--------------- 216

Query: 295 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
                     P +     L +L+ L+ R  +L+  P  I +L+ L  + L+ N L+S+P 
Sbjct: 217 ----------PLSTEIGELENLKMLHFRDNKLKSLPAKIGKLKNLETIYLNNNELESLPS 266

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
               L +L  LDL +N +  LP  +  L  SL  L L GN +  I     +RG     K 
Sbjct: 267 EIGELRNLRYLDLRNNKLKVLPDTIRKLFSSLHLLYLTGNSISEIG----ERGRTLGKKE 322

Query: 415 LKD 417
           LK+
Sbjct: 323 LKE 325



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 154/307 (50%), Gaps = 22/307 (7%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  S N L  +P  IG L  L  LDL+ N + ++PS I    +L + Y+ N
Sbjct: 15  IKRLVKLEKLDLSVNKLESLPPEIGRLVNLKTLDLNINNLETLPSEIGDLVNLQKLYLNN 74

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP+E+GKL+ L  L L  N L+    E  +L RL  L LSNN+L  L P+IG + 
Sbjct: 75  NNLETLPSEIGKLTNLQDLHLIDNNLETLPSEIGELKRLRNLHLSNNNLKILLPKIGGLV 134

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            LR+L L+GN +  L         P+ +  L +    + ++    +   +I   T L   
Sbjct: 135 NLRELYLSGNNIEAL---------PSEIGDLVNLRNLHLNNNKLKSFPVVIGKLTNL--- 182

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L G  L ++PSEI     +  L L+ N  + L  E+    +L+ L    NK+K  
Sbjct: 183 -QELHLNGNKLKSLPSEIRTLKNLEILYLNDNEFEPLSTEIGELENLKMLHFRDNKLKSL 241

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN--PPFSSLP 314
           P A +  L +L  + L+NN L  +PS+   ++  L+ LDL  N +  LP+     FSSL 
Sbjct: 242 P-AKIGKLKNLETIYLNNNELESLPSE-IGELRNLRYLDLRNNKLKVLPDTIRKLFSSL- 298

Query: 315 HLQELYL 321
           HL  LYL
Sbjct: 299 HL--LYL 303



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 26/180 (14%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           +S+    +++I S I    ++ KLDLS N ++ LPPE+    +L+TL L+ N ++  P  
Sbjct: 1   ISIRCQGITSIDSNIKRLVKLEKLDLSVNKLESLPPEIGRLVNLKTLDLNINNLETLPSE 60

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 320
           I   L +L  L L+NN L  +PS+                            L +LQ+L+
Sbjct: 61  I-GDLVNLQKLYLNNNNLETLPSE-------------------------IGKLTNLQDLH 94

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L    L   P++I  L++LR L LS N+L+ +      L +L EL LS NNI ALP E+G
Sbjct: 95  LIDNNLETLPSEIGELKRLRNLHLSNNNLKILLPKIGGLVNLRELYLSGNNIEALPSEIG 154


>gi|418686455|ref|ZP_13247621.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410738888|gb|EKQ83620.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 380

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 163/354 (46%), Gaps = 43/354 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++  N+   L    I     L EL  +KN L  +P+ IG L  L +L+L+ N+   +P 
Sbjct: 51  LNLSANRFKTLPKE-IGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPK 109

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +    +L E Y+G+N L+ LP E+G+L  L  L+L  NQ K    E  QL+ L  L+L 
Sbjct: 110 EVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLG 169

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ LP EIG++  L+ L L  N L  L + +        L+ L+S            
Sbjct: 170 YNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEI------GQLQNLQS------------ 211

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                             L L    L+ +P+EI +   +  L L  N +  LP E+    
Sbjct: 212 ------------------LYLSTNRLTTLPNEIGQLQNLQSLYLGSNLLTTLPKEIGQLQ 253

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +LQ L L  N++   P  I   L  L  L L  N L+ +P++    +  LQ L LSYN +
Sbjct: 254 NLQQLELDYNRLYTLPKEI-GRLKKLRTLSLWGNRLKTLPNE-IGQLKNLQRLHLSYNQL 311

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
            +LP       L +LQEL LR   L   P  I +L+ L+ LDL  N L S  +G
Sbjct: 312 KTLPN--EIEQLQNLQELDLRNNLLTTLPKGIGQLKNLQKLDLRNNELFSEEKG 363



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 168/351 (47%), Gaps = 45/351 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L+L  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L+ NQ      E
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKE 110

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L  L  L L +N L+ LP EIG++  LR L LT N  +T+   +        LK L+
Sbjct: 111 VEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEI------GQLKNLQ 164

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           +                              L+L    L+A+P+EI +   +  L L  N
Sbjct: 165 T------------------------------LNLGYNQLTALPNEIGQLKNLQSLYLGSN 194

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKD 288
            +  LP E+    +LQ+L LS N++   P+ I   L +L  L L +N L  +P + G   
Sbjct: 195 QLTALPNEIGQLQNLQSLYLSTNRLTTLPNEI-GQLQNLQSLYLGSNLLTTLPKEIGQLQ 253

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
                 LD  YN + +LP+      L  L+ L L   +L+  P +I +L+ L+ L LS N
Sbjct: 254 NLQQLELD--YNRLYTLPK--EIGRLKKLRTLSLWGNRLKTLPNEIGQLKNLQRLHLSYN 309

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
            L+++P   + L +L ELDL +N ++ LP  +G L+ +LQ L L  N L S
Sbjct: 310 QLKTLPNEIEQLQNLQELDLRNNLLTTLPKGIGQLK-NLQKLDLRNNELFS 359



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 165/346 (47%), Gaps = 42/346 (12%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N    +P+ IG L  L  L+L++N++  +P  I    +L +  + +N  + LP E+ K
Sbjct: 54  SANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEK 113

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  L L SNQL     E  QL+ L VL+L++N    +P EIG++  L+ L L  N L
Sbjct: 114 LENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQL 173

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
             L + +        LK L+S                              L L    L+
Sbjct: 174 TALPNEI------GQLKNLQS------------------------------LYLGSNQLT 197

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
           A+P+EI +   +  L LS N +  LP E+    +LQ+L L  N +   P  I   L +L 
Sbjct: 198 ALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNLLTTLPKEI-GQLQNLQ 256

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
            L+LD N L  +P +    +  L+ L L  N + +LP       L +LQ L+L   QL+ 
Sbjct: 257 QLELDYNRLYTLPKE-IGRLKKLRTLSLWGNRLKTLPN--EIGQLKNLQRLHLSYNQLKT 313

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
            P +I +LQ L+ LDL  N L ++P+G   L +L +LDL +N + +
Sbjct: 314 LPNEIEQLQNLQELDLRNNLLTTLPKGIGQLKNLQKLDLRNNELFS 359



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 142/288 (49%), Gaps = 21/288 (7%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RL 172
           L + VL+LS N    LP EIGK+  L++L L  N L  L   +        LK LR   L
Sbjct: 46  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEI------GQLKNLRKLNL 99

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
            +N+ +      E L  +        KEL L    L+ +P+EI +   +  L+L+ N  +
Sbjct: 100 YDNQFTILPKEVEKLENL--------KELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFK 151

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
            +P E+    +LQTL L  N++   P+ I   L +L  L L +N L  +P++    +  L
Sbjct: 152 TIPKEIGQLKNLQTLNLGYNQLTALPNEI-GQLKNLQSLYLGSNQLTALPNE-IGQLQNL 209

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           Q L LS N + +LP       L +LQ LYL    L   P +I +LQ L+ L+L  N L +
Sbjct: 210 QSLYLSTNRLTTLPN--EIGQLQNLQSLYLGSNLLTTLPKEIGQLQNLQQLELDYNRLYT 267

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           +P+    L  L  L L  N +  LP E+G L+ +LQ L L  N L+++
Sbjct: 268 LPKEIGRLKKLRTLSLWGNRLKTLPNEIGQLK-NLQRLHLSYNQLKTL 314


>gi|432104584|gb|ELK31196.1| Protein LAP2 [Myotis davidii]
          Length = 1457

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 188/400 (47%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNALQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLVSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   +  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGNWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMIEEG-ISACENLQDLLLSSNALQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGNWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDVSKNNIEMIEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNALQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NIRTFAADHNYLQQL 337



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 40/257 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T +   ++   + L E     N L  +P  IGSL +L  LD+ +N I  
Sbjct: 186 LERLDLGSNEFTEVPE-VLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEM 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-- 118
           I   IS C +L +  + +NAL  LP  +G L  + TL +  NQL  Y  ++    +S+  
Sbjct: 245 IEEGISACENLQDLLLSSNALQQLPETIGSLKNVTTLKIDENQLM-YLPDSIGGLVSIEE 303

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LD S N +  LP  IG++T +R      N                   YL+   PE    
Sbjct: 304 LDCSFNEVEALPSSIGQLTNIRTFAADHN-------------------YLQQLPPE---- 340

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                    I     ++V    L L    L  +P E+ +  ++  ++LS N ++ LP   
Sbjct: 341 ---------IGNWKNITV----LFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 239 SSCASLQTLILSRNKIK 255
           +    L  + LS N+ K
Sbjct: 388 TKLQQLTAMWLSDNQSK 404


>gi|260826171|ref|XP_002608039.1| hypothetical protein BRAFLDRAFT_74989 [Branchiostoma floridae]
 gi|229293389|gb|EEN64049.1| hypothetical protein BRAFLDRAFT_74989 [Branchiostoma floridae]
          Length = 975

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 119/250 (47%), Gaps = 16/250 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N+LT +    I     L  + A  N+L  +P+ IGSLS+L  L ++ NR+  +P 
Sbjct: 384 LDVSNNELTSIPE-AIGRLQKLNRMDAGGNMLTSLPQAIGSLSKLTHLYIYDNRLTELPP 442

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLS 122
            I   C+L    +GNN LS LP ++ KL KL  L +H NQLKE     C  L L VL   
Sbjct: 443 WICSLCNLEVLVVGNNRLSTLPPDIEKLRKLTNLHIHDNQLKEVPQAICSLLNLEVLVTG 502

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN LS LPP +G++  LR+L +  N ++ L   +      +L  +        E  + S 
Sbjct: 503 NNRLSKLPPGVGRLQNLRELFINDNQVKMLPLGVF-----SLFNF--------EVLDVSN 549

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
            K   +    + +   +E+ L        P  + E   + KLD+  N+I  LP  L    
Sbjct: 550 NKVSTLPPGAK-NANLREVYLYNNKFDTFPEVLCELPAMEKLDIRFNNISRLPTALHRAD 608

Query: 243 SLQTLILSRN 252
            L+ L +S N
Sbjct: 609 KLEDLDVSGN 618



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 210/474 (44%), Gaps = 72/474 (15%)

Query: 6   VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ---NRILSIP 62
           V  N +  LS++ I   T L  LI +    +  P  +  L  L  L   Q   ++   +P
Sbjct: 180 VARNPIRRLSDD-ITRLTRLKSLIVADCHFDEFPRQVLHLKTLEVLYAGQAGGSKFDMVP 238

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
             +     L    + NN L  LP+ +  L  L  ++L +NQ   +    C+L  +  LD+
Sbjct: 239 DELEDLQHLWYLSLENNLLRTLPSTMSHLHNLRVVNLWNNQFDTFPEVLCELPAMKELDI 298

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
            NNS++ LP  + +   L  L + GNPL T     V G T A++ +L+    + E+ +  
Sbjct: 299 KNNSITRLPIALHRADKLEDLNVFGNPL-TYPPRHVQG-TRAIMTFLKQ---QGENLQPQ 353

Query: 182 TTKEDL------------------ITMATRLSVTSKELS--------LEGMN-------- 207
           T    L                  IT    L V++ EL+        L+ +N        
Sbjct: 354 TVNGHLKIDLSNQGLTSIPEEVFDITGLEVLDVSNNELTSIPEAIGRLQKLNRMDAGGNM 413

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+++P  I    ++T L +  N + ELPP + S  +L+ L++  N++   P  I   L  
Sbjct: 414 LTSLPQAIGSLSKLTHLYIYDNRLTELPPWICSLCNLEVLVVGNNRLSTLPPDI-EKLRK 472

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L+ L + +N L++VP      +  L++L    N ++ LP  P    L +L+EL++   Q+
Sbjct: 473 LTNLHIHDNQLKEVPQ-AICSLLNLEVLVTGNNRLSKLP--PGVGRLQNLRELFINDNQV 529

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKN----------------------LTSLTE 364
           +  P  +  L    +LD+S N + ++P G KN                      L ++ +
Sbjct: 530 KMLPLGVFSLFNFEVLDVSNNKVSTLPPGAKNANLREVYLYNNKFDTFPEVLCELPAMEK 589

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           LD+  NNIS LP  L   +  L+ L + GNPL    + +  +GT A++ +LK +
Sbjct: 590 LDIRFNNISRLPTALHRAD-KLEDLDVSGNPLTYPPQDVCKQGTAAIMAFLKHE 642



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 176/393 (44%), Gaps = 59/393 (15%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           LN  P+ +  L   ++LDL    + SIP  +     L    + NN L+ +P  +G+L KL
Sbjct: 4   LNLQPQIVNGL---LKLDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTNIPEAIGRLQKL 60

Query: 95  GTLDLHSNQLKE--YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
            TL  +SN L    + + + Q  L +L + NN LS LP  +  +  L  L +  N L  L
Sbjct: 61  DTLSAYSNMLTSLPHAIRSLQ-ELKLLVVYNNDLSMLPDGLESLENLEYLNVKNNKLTKL 119

Query: 153 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
            S + + P   +L    ++                                    LS  P
Sbjct: 120 PSKVFSCPNLVVLNVGNNK------------------------------------LSTFP 143

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
           + + +  ++TKL L  N + E+P  + S ++L+ L ++RN I+   D I T L+ L  L 
Sbjct: 144 AGVEKLQKLTKLYLHSNELTEVPSGVYSLSNLEVLCVARNPIRRLSDDI-TRLTRLKSLI 202

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP-------HLQELYLRRMQ 325
           + +    + P    + +  L+ L++ Y  A       F  +P       HL  L L    
Sbjct: 203 VADCHFDEFP----RQVLHLKTLEVLY--AGQAGGSKFDMVPDELEDLQHLWYLSLENNL 256

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           LR  P+ +  L  LR+++L  N   + PE    L ++ ELD+ +N+I+ LP  L   +  
Sbjct: 257 LRTLPSTMSHLHNLRVVNLWNNQFDTFPEVLCELPAMKELDIKNNSITRLPIALHRAD-K 315

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           L+ L + GNPL    R +  +GT+A++ +LK +
Sbjct: 316 LEDLNVFGNPLTYPPRHV--QGTRAIMTFLKQQ 346



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 174/402 (43%), Gaps = 44/402 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L    N LT L +  I S   L  L+   N L+ +P+ + SL  L  L++  N++  
Sbjct: 60  LDTLSAYSNMLTSLPH-AIRSLQELKLLVVYNNDLSMLPDGLESLENLEYLNVKNNKLTK 118

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +PS +  C +L    +GNN LS  PA + KL KL  L LHSN+L E       L  L VL
Sbjct: 119 LPSKVFSCPNLVVLNVGNNKLSTFPAGVEKLQKLTKLYLHSNELTEVPSGVYSLSNLEVL 178

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            ++ N +  L  +I ++T L+ L++           +++  T  +L             +
Sbjct: 179 CVARNPIRRLSDDITRLTRLKSLIVADCHFDEFPRQVLHLKTLEVLYA----------GQ 228

Query: 180 ASTTKEDLIT------------------MATRLSVTSKELSLEGMNL-----SAIPSEIW 216
           A  +K D++                   + T  S  S   +L  +NL        P  + 
Sbjct: 229 AGGSKFDMVPDELEDLQHLWYLSLENNLLRTLPSTMSHLHNLRVVNLWNNQFDTFPEVLC 288

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           E   + +LD+  NSI  LP  L     L+ L +  N +   P  +  + + ++ LK    
Sbjct: 289 ELPAMKELDIKNNSITRLPIALHRADKLEDLNVFGNPLTYPPRHVQGTRAIMTFLKQQGE 348

Query: 277 PLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            L+    +G   I      DLS   + S+PE      +  L+ L +   +L   P  I R
Sbjct: 349 NLQPQTVNGHLKI------DLSNQGLTSIPEE--VFDITGLEVLDVSNNELTSIPEAIGR 400

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           LQ+L  +D   N L S+P+   +L+ LT L + DN ++ LPP
Sbjct: 401 LQKLNRMDAGGNMLTSLPQAIGSLSKLTHLYIYDNRLTELPP 442



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 179/413 (43%), Gaps = 37/413 (8%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           KLD+    LT +   +    T L  L  S N L  +PE IG L +L  L  + N + S+P
Sbjct: 16  KLDLSNQGLTSIPEEVF-DITDLEVLDVSNNKLTNIPEAIGRLQKLDTLSAYSNMLTSLP 74

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLD 120
            +I     L    + NN LS LP  L  L  L  L++ +N+L +    V +C   L VL+
Sbjct: 75  HAIRSLQELKLLVVYNNDLSMLPDGLESLENLEYLNVKNNKLTKLPSKVFSCP-NLVVLN 133

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           + NN LS  P  + K+  L KL L  N L  + S + +     +L   R+ +    D   
Sbjct: 134 VGNNKLSTFPAGVEKLQKLTKLYLHSNELTEVPSGVYSLSNLEVLCVARNPIRRLSDDIT 193

Query: 181 STTK-EDLITMATRLSVTSKEL----SLE--------GMNLSAIPSEIWEAGEITKLDLS 227
             T+ + LI          +++    +LE        G     +P E+ +   +  L L 
Sbjct: 194 RLTRLKSLIVADCHFDEFPRQVLHLKTLEVLYAGQAGGSKFDMVPDELEDLQHLWYLSLE 253

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP----- 282
            N ++ LP  +S   +L+ + L  N+   +P+ +L  L ++  L + NN + ++P     
Sbjct: 254 NNLLRTLPSTMSHLHNLRVVNLWNNQFDTFPE-VLCELPAMKELDIKNNSITRLPIALHR 312

Query: 283 SDGFKDI---------PMLQILDLSYNIASLPEN----PPFSSLPHLQELYLRRMQLREA 329
           +D  +D+         P   +      +  L +      P +   HL+ + L    L   
Sbjct: 313 ADKLEDLNVFGNPLTYPPRHVQGTRAIMTFLKQQGENLQPQTVNGHLK-IDLSNQGLTSI 371

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
           P ++  +  L +LD+S N L SIPE    L  L  +D   N +++LP  +G L
Sbjct: 372 PEEVFDITGLEVLDVSNNELTSIPEAIGRLQKLNRMDAGGNMLTSLPQAIGSL 424



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 91/231 (39%), Gaps = 47/231 (20%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L +  N+LT L    I S   L  L+   N L+ +P  I  L +L  L +H N++  
Sbjct: 427 LTHLYIYDNRLTELPP-WICSLCNLEVLVVGNNRLSTLPPDIEKLRKLTNLHIHDNQLKE 485

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P +I    +L     GNN LS LP  +G+L  L  L ++ NQ+K   +    L    VL
Sbjct: 486 VPQAICSLLNLEVLVTGNNRLSKLPPGVGRLQNLRELFINDNQVKMLPLGVFSLFNFEVL 545

Query: 120 DLSNNSLSGLPP--------------------------------------EIGKMTT--- 138
           D+SNN +S LPP                                       I ++ T   
Sbjct: 546 DVSNNKVSTLPPGAKNANLREVYLYNNKFDTFPEVLCELPAMEKLDIRFNNISRLPTALH 605

Query: 139 ----LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 185
               L  L ++GNPL      +    T A++ +L+      +     T  E
Sbjct: 606 RADKLEDLDVSGNPLTYPPQDVCKQGTAAIMAFLKHETAARKSDNMETASE 656


>gi|340376574|ref|XP_003386807.1| PREDICTED: protein lap4-like [Amphimedon queenslandica]
          Length = 1561

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 170/392 (43%), Gaps = 71/392 (18%)

Query: 10  KLTVLSNN------LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           KLT+  N       +IA++T L EL  SKN L  +P  I     L  LD+  N +L IP 
Sbjct: 63  KLTLCENEIMRLSPMIANFTKLIELDISKNCLEEVPSNIQFCRSLAILDISCNPLLRIPD 122

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            ++   SL   Y+ + AL ALP E+G L  L                       VL+   
Sbjct: 123 CVANIGSLTHLYINDVALPALPREIGNLRNL----------------------IVLEARE 160

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N L  +PP +G M  L++L L  N +  L         P    YL               
Sbjct: 161 NVLRRVPPSLGDMLKLQRLDLGNNEIEEL---------PPTFGYL--------------- 196

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
            EDL            EL L+   LS +P  +    ++  LD+++N ++  P   S+  +
Sbjct: 197 -EDL-----------NELWLDSNCLSLLPESLSRLHKLHVLDVTKNKLERFPNHFSNLVN 244

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-A 302
           L  L  S N I+  PD     + SL  +KLD N L  +P D   D+PM   + L  N+  
Sbjct: 245 LVDLHASENCIECLPDN-FGLMKSLVQIKLDLNHLVYLP-DSIGDLPMATEIFLFENMLE 302

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
           S+P  P   ++P LQ L + R  +   P+ I R + L +    +N L+S+PE    L+SL
Sbjct: 303 SIP--PTLFNIPTLQMLNIDRNHVMYIPSTIGRCKSLHVFSARENDLRSLPEELGELSSL 360

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGN 394
             LD+  N +  LP  +  L+  L A  + GN
Sbjct: 361 RVLDVCGNRLHCLPLSISNLQ--LDAFWISGN 390



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 145/316 (45%), Gaps = 44/316 (13%)

Query: 93  KLGTLDLHSNQLKEYCVEACQLRLSVLDL--SNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
           ++  +D  S QL+E   +  +   ++ DL   +N +  LPP+  ++T LRKL L  N + 
Sbjct: 13  QIDYVDRRSCQLQEIPDDIYRYEDTLEDLMIDSNMIQELPPKFFRLTNLRKLTLCENEIM 72

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
            L        +P +  + +                 LI           EL +    L  
Sbjct: 73  RL--------SPMIANFTK-----------------LI-----------ELDISKNCLEE 96

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +PS I     +  LD+S N +  +P  +++  SL  L ++   +   P  I  +L +L  
Sbjct: 97  VPSNIQFCRSLAILDISCNPLLRIPDCVANIGSLTHLYINDVALPALPREI-GNLRNLIV 155

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 329
           L+   N LR+VP     D+  LQ LDL  N I  LP  P F  L  L EL+L    L   
Sbjct: 156 LEARENVLRRVPP-SLGDMLKLQRLDLGNNEIEELP--PTFGYLEDLNELWLDSNCLSLL 212

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
           P  + RL +L +LD+++N L+  P  F NL +L +L  S+N I  LP   GL++ SL  +
Sbjct: 213 PESLSRLHKLHVLDVTKNKLERFPNHFSNLVNLVDLHASENCIECLPDNFGLMK-SLVQI 271

Query: 390 RLDGNPLRSIRRTILD 405
           +LD N L  +  +I D
Sbjct: 272 KLDLNHLVYLPDSIGD 287



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 14/199 (7%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           KLD+  N L  L ++ I    M TE+   +N+L  +P T+ ++  L  L++ +N ++ IP
Sbjct: 272 KLDL--NHLVYLPDS-IGDLPMATEIFLFENMLESIPPTLFNIPTLQMLNIDRNHVMYIP 328

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 122
           S+I  C SL  F    N L +LP ELG+LS L  LD+  N+L    +    L+L    +S
Sbjct: 329 STIGRCKSLHVFSARENDLRSLPEELGELSSLRVLDVCGNRLHCLPLSISNLQLDAFWIS 388

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN---GPTPALLKYLRSRLPENEDSE 179
            N    LP     + +L +     NP R + +       GP  +   Y+ +  PE+E+S 
Sbjct: 389 GN--QPLP-----LISLHQEPDPDNPDRKVLTCQFFPQMGPETSEFDYIDNSDPESEESG 441

Query: 180 ASTTKED-LITMATRLSVT 197
            S  +    +  +TRL+V 
Sbjct: 442 FSQRRRSAAVRKSTRLAVA 460


>gi|195036246|ref|XP_001989582.1| GH18723 [Drosophila grimshawi]
 gi|193893778|gb|EDV92644.1| GH18723 [Drosophila grimshawi]
          Length = 1864

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTSLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+    SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEMGGLVSLTDLDLAQNLLETLPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCDNMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I R+ +L  L++ +N+L+ +P      ++L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGRMTKLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ SLP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTSLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 90/159 (56%), Gaps = 2/159 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N+L  L N +      LT+L  ++NLL  +P+ I  LSRL  L L QNR+  
Sbjct: 223 LTYLDVSENRLEELPNEM-GGLVSLTDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQR 281

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +  ++  C ++ E  +  N LS LPA +G+++KL  L++  N L+   +E  Q   L VL
Sbjct: 282 LNDTLGNCDNMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEIGQCSNLGVL 341

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
            L +N L  LPPE+G  T L  L ++GN L  L  SLVN
Sbjct: 342 SLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVN 380



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 118/240 (49%), Gaps = 20/240 (8%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEMGGLVSLTDLDLAQNLLETLPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            L  L L  N L+ L  +L N        L +   S LP +            I   T+L
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNCDNMQELILTENFLSELPAS------------IGRMTKL 315

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
           S     L+++   L  +P EI +   +  L L  N +++LPPEL +C  L  L +S N++
Sbjct: 316 S----NLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQL 371



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L++LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTSLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+    SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEMGGLVSLTDLDLAQNLLETL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCDNMQELILTENFLSELPAS--IGRMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 SNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375


>gi|225708876|gb|ACO10284.1| Ras suppressor protein 1 [Caligus rogercresseyi]
          Length = 280

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 112/207 (54%), Gaps = 7/207 (3%)

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
           S++W+   IT+L L  N I E+PP L++  +L+ L L  N +++ P +I + LS+L  L 
Sbjct: 37  SKLWDLRNITRLTLCHNKIVEVPPALANLDNLEILNLFNNDLEEIPTSI-SELSNLRILN 95

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 331
           L  N L  +P  GF   P L++LDLSYN +  LP N  F  L  L+ LYL        P 
Sbjct: 96  LAQNKLNSLPR-GFGSFPNLEVLDLSYNNLDVLPGN--FFILSSLRALYLSDNDFDHLPP 152

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE--PSLQAL 389
           ++  L  LRIL L  NSL  +PE   +L +L EL L  N +S LPP LG L+   S   L
Sbjct: 153 ELGILTNLRILALRDNSLVELPEKIISLVNLRELHLQGNRLSVLPPTLGSLDFLSSRAVL 212

Query: 390 RLDGNPLRSIRRTILDRGTKAVLKYLK 416
           +LD NP        L  G   V++Y++
Sbjct: 213 KLDNNPWVQPIEETLALGVSHVIEYIR 239



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 3/159 (1%)

Query: 2   SKLDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 59
           +++D     L  L   L   W +  +T L    N +  +P  + +L  L  L+L  N + 
Sbjct: 20  AEIDFSDKNLIHLEGELSKLWDLRNITRLTLCHNKIVEVPPALANLDNLEILNLFNNDLE 79

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 118
            IP+SIS   +L    +  N L++LP   G    L  LDL  N L         L  L  
Sbjct: 80  EIPTSISELSNLRILNLAQNKLNSLPRGFGSFPNLEVLDLSYNNLDVLPGNFFILSSLRA 139

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
           L LS+N    LPPE+G +T LR L L  N L  L   ++
Sbjct: 140 LYLSDNDFDHLPPELGILTNLRILALRDNSLVELPEKII 178



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 6/145 (4%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           ++N LN +P   GS   L  LDL  N +  +P +     SL   Y+ +N    LP ELG 
Sbjct: 97  AQNKLNSLPRGFGSFPNLEVLDLSYNNLDVLPGNFFILSSLRALYLSDNDFDHLPPELGI 156

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL--RKLL-LTG 146
           L+ L  L L  N L E   +   L  L  L L  N LS LPP +G +  L  R +L L  
Sbjct: 157 LTNLRILALRDNSLVELPEKIISLVNLRELHLQGNRLSVLPPTLGSLDFLSSRAVLKLDN 216

Query: 147 NP-LRTLRSSLVNGPTPALLKYLRS 170
           NP ++ +  +L  G    +++Y+R+
Sbjct: 217 NPWVQPIEETLALG-VSHVIEYIRT 240


>gi|332233712|ref|XP_003266047.1| PREDICTED: protein LAP2 isoform 2 [Nomascus leucogenys]
          Length = 1301

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|347963067|ref|XP_311104.5| AGAP000054-PA [Anopheles gambiae str. PEST]
 gi|333467375|gb|EAA06225.6| AGAP000054-PA [Anopheles gambiae str. PEST]
          Length = 1593

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 176/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL+   N +  +P+    L RL +L L  N I+ IPS I    +L E  +  N +  +
Sbjct: 39  LEELLLDANHIRDLPKGFFRLYRLRKLGLSDNDIIKIPSDIQNFVNLVELDVSRNEIGDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN +        QLR L+VL L++ SL  LP + G ++ L  L 
Sbjct: 99  PEDIKHLRSLQIADFSSNPISRLPAGFTQLRNLTVLGLNDMSLISLPQDFGCLSKLVSLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  S+       L K  R  L +NE  E  +    L ++        +EL L
Sbjct: 159 LRENLLKNLPESISQ-----LTKLERLDLGDNEIDELPSHVGYLPSL--------QELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P EI    ++  LD+S N ++ELP E+     L  L LS+N ++  P+ I +
Sbjct: 206 DHNQLLRLPPEIGLLKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPNGI-S 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            L++LS LKLD N L  +                         N       H+QEL L  
Sbjct: 265 KLTNLSILKLDQNRLHTL-------------------------NDSIGCCVHMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  +  +  L  L++ +NSL ++P    N   L  L L +N ++ LP ELG   
Sbjct: 300 NFLSELPATVGNMLVLNNLNVDRNSLVAVPSELGNCRQLGVLSLRENKLTRLPAELGNCG 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L+ +  ++++   KAV
Sbjct: 360 -ELHVLDVSGNLLQHLPYSLVNLQLKAV 386



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 134/258 (51%), Gaps = 19/258 (7%)

Query: 9   NKLTVLSNNLIASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
           N ++++S  L   +  L++L++    +NLL  +PE+I  L++L RLDL  N I  +PS +
Sbjct: 137 NDMSLIS--LPQDFGCLSKLVSLELRENLLKNLPESISQLTKLERLDLGDNEIDELPSHV 194

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 124
               SL E ++ +N L  LP E+G L KL  LD+  N+L+E   E   L  L+ L LS N
Sbjct: 195 GYLPSLQELWLDHNQLLRLPPEIGLLKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQN 254

Query: 125 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 184
            L  LP  I K+T L  L L  N L TL  S+  G    + + +   L EN  SE   T 
Sbjct: 255 LLETLPNGISKLTNLSILKLDQNRLHTLNDSI--GCCVHMQELI---LTENFLSELPATV 309

Query: 185 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 244
            +++ +          L+++  +L A+PSE+    ++  L L  N +  LP EL +C  L
Sbjct: 310 GNMLVL--------NNLNVDRNSLVAVPSELGNCRQLGVLSLRENKLTRLPAELGNCGEL 361

Query: 245 QTLILSRNKIKDWPDAIL 262
             L +S N ++  P +++
Sbjct: 362 HVLDVSGNLLQHLPYSLV 379



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 156/360 (43%), Gaps = 43/360 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +PE I  L  L   D   N I  +P+  +   +L    + +
Sbjct: 79  IQNFVNLVELDVSRNEIGDIPEDIKHLRSLQIADFSSNPISRLPAGFTQLRNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L +LP + G LSKL +L+L  N LK       QL +L  LDL +N +  LP  +G + 
Sbjct: 139 MSLISLPQDFGCLSKLVSLELRENLLKNLPESISQLTKLERLDLGDNEIDELPSHVGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSV 196
           +L++L L  N L  L       P   LLK L    + EN   E       L  +      
Sbjct: 199 SLQELWLDHNQLLRLP------PEIGLLKKLVCLDVSENRLEELPEEIGGLECLT----- 247

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
              +L L    L  +P+ I +   ++ L L +N +  L   +  C  +Q LIL+ N + +
Sbjct: 248 ---DLHLSQNLLETLPNGISKLTNLSILKLDQNRLHTLNDSIGCCVHMQELILTENFLSE 304

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 316
            P A + ++  L+ L +D N L  VPS+                           +   L
Sbjct: 305 LP-ATVGNMLVLNNLNVDRNSLVAVPSE-------------------------LGNCRQL 338

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L LR  +L   P ++    +L +LD+S N LQ +P    NL  L  + LS+N    +P
Sbjct: 339 GVLSLRENKLTRLPAELGNCGELHVLDVSGNLLQHLPYSLVNL-QLKAVWLSENQSQPVP 397



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 4/140 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S L ++ N+L  L N+ I     + ELI ++N L+ +P T+G++  L  L++ +N +++
Sbjct: 269 LSILKLDQNRLHTL-NDSIGCCVHMQELILTENFLSELPATVGNMLVLNNLNVDRNSLVA 327

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +PS +  C  L    +  N L+ LPAELG   +L  LD+  N L+        L+L  + 
Sbjct: 328 VPSELGNCRQLGVLSLRENKLTRLPAELGNCGELHVLDVSGNLLQHLPYSLVNLQLKAVW 387

Query: 121 LSNNSLSGLP---PEIGKMT 137
           LS N    +P   P++ + T
Sbjct: 388 LSENQSQPVPTFQPDVDETT 407



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 57/118 (48%), Gaps = 8/118 (6%)

Query: 286 FKDIPML-----QILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDILRLQQ 338
           FK IP+      QI  +    +SLP  P   F     L+EL L    +R+ P    RL +
Sbjct: 2   FKYIPIFKGCNRQIEYVDNRHSSLPNVPEEIFRYSNSLEELLLDANHIRDLPKGFFRLYR 61

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           LR L LS N +  IP   +N  +L ELD+S N I  +P ++  L  SLQ      NP+
Sbjct: 62  LRKLGLSDNDIIKIPSDIQNFVNLVELDVSRNEIGDIPEDIKHLR-SLQIADFSSNPI 118


>gi|424842302|ref|ZP_18266927.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395320500|gb|EJF53421.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 600

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 179/399 (44%), Gaps = 43/399 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L ++GN+L +L NNL A    L  + A  N L  +PET+G L RL  L L +N++  
Sbjct: 143 LRRLYIDGNELRMLPNNL-AEIRKLAFIAAENNQLQSIPETLGKLKRLRSLLLDKNQLQY 201

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE-------------Y 107
           +P ++SG  +L    + +N L  LP  L  L KL  L    NQL+E              
Sbjct: 202 LPETLSGASALEVLAVDDNRLKKLPEALVYLKKLTFLFAAHNQLQELPPQIGSSRNLLKL 261

Query: 108 CVEACQL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           CVE  QL           +L +L L +N L  LP   G++  LRKL L  N L  L  + 
Sbjct: 262 CVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKNFGQLKALRKLYLDSNQLTVLPINF 321

Query: 157 VNGPTPALLK-YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 215
             G   AL   YL      +  S     KE             +EL L    ++++P  +
Sbjct: 322 --GELTALENLYLNDNQLTSLPSGIGNCKE------------LRELFLNNNAMTSLPDSM 367

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW-PDAILTSLSSLSCLKLD 274
               ++ +L ++ N I  LP       +L+ L L+ NKI     D   +    LS + L+
Sbjct: 368 GSLYQLEELYMNDNQIANLPSSFGGLKNLKLLYLTNNKINRLSKDLDCSGWKRLSAIYLE 427

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           NN  +++P    +  P LQ L L  N+ S   +     +P ++ + L   QL E P D +
Sbjct: 428 NNAFQKLPK-ALETAPQLQTLYLDGNLISEVNDSTIIKMPKIEHISLNDNQLSELP-DNM 485

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
               +R L L +N +  +PE  +   +L  LDL+ N I+
Sbjct: 486 GSWPIRHLALERNGIMDLPESIRYFKNLELLDLAGNKIT 524



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 176/372 (47%), Gaps = 43/372 (11%)

Query: 40  ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 99
           ++I     L  L+L  N +  +P  +     L E  + NN L  LP ++  L  L  L +
Sbjct: 89  DSIREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQLQYLPEKIKGLRNLRRLYI 148

Query: 100 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
             N+L+       ++R L+ +   NN L  +P  +GK+  LR LLL  N L+        
Sbjct: 149 DGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLLLDKNQLQY------- 201

Query: 159 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 218
                        LPE             ++ A+ L V    L+++   L  +P  +   
Sbjct: 202 -------------LPET------------LSGASALEV----LAVDDNRLKKLPEALVYL 232

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
            ++T L  + N +QELPP++ S  +L  L +  N+++  P++I   L  L  L+L++N L
Sbjct: 233 KKLTFLFAAHNQLQELPPQIGSSRNLLKLCVEHNQLQRLPESI-GQLQKLELLRLEHNQL 291

Query: 279 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           +Q+P + F  +  L+ L L  N +  LP N  F  L  L+ LYL   QL   P+ I   +
Sbjct: 292 KQLPKN-FGQLKALRKLYLDSNQLTVLPIN--FGELTALENLYLNDNQLTSLPSGIGNCK 348

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
           +LR L L+ N++ S+P+   +L  L EL ++DN I+ LP   G L+ +L+ L L  N + 
Sbjct: 349 ELRELFLNNNAMTSLPDSMGSLYQLEELYMNDNQIANLPSSFGGLK-NLKLLYLTNNKIN 407

Query: 398 SIRRTILDRGTK 409
            + + +   G K
Sbjct: 408 RLSKDLDCSGWK 419



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 29/197 (14%)

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           + +   +I + +     + +LDLS +S+  L                        D+I  
Sbjct: 57  DAITYYSIETAMEVKDRVHRLDLSNDSLVSL-----------------------GDSI-R 92

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
               L  L L+NN L+++P DG  D+P L+ L LS N +  LPE      L +L+ LY+ 
Sbjct: 93  EFRHLFFLNLENNYLKELP-DGLFDLPYLEELRLSNNQLQYLPE--KIKGLRNLRRLYID 149

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
             +LR  P ++  +++L  +    N LQSIPE    L  L  L L  N +  LP  L   
Sbjct: 150 GNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLLLDKNQLQYLPETLS-G 208

Query: 383 EPSLQALRLDGNPLRSI 399
             +L+ L +D N L+ +
Sbjct: 209 ASALEVLAVDDNRLKKL 225


>gi|407040320|gb|EKE40068.1| leucine rich repeat / protein phosphatase 2C domain containing
           protein [Entamoeba nuttalli P19]
          Length = 861

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 208/469 (44%), Gaps = 82/469 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N L     ++    T LTE+  S N +  + +  GSL  L  +DL  NRI S
Sbjct: 76  LKTLDLSSNHLKRFCKSI--KLTSLTEINLSINQITKIDDDFGSLHALRFMDLSINRIQS 133

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAEL-----------------------GKLSKLGTL 97
           +P  +S   SL    + NN L++ P  L                        K+S L  L
Sbjct: 134 VPKHLSKLTSLTFIDISNNLLTSFPTPLLELSSLIVLKVKENKITTIPNGMSKMSNLQIL 193

Query: 98  DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           D+ +N++ +     C+L +LSVLD+S N ++ +  +I  +TT++++ ++ +PL+TL  S 
Sbjct: 194 DISNNKIDKITPSLCKLTKLSVLDVSANPINEINDQIQNLTTIKEIDISYSPLKTLPKSF 253

Query: 157 ---------------VNGPTPALLKYLR--------------SRLPENEDSEASTTK--- 184
                          V  P   L K+ +              + LP + D + S  +   
Sbjct: 254 MSLVGLRKLTLQHTSVKVPPAGLQKFTKVSELNLSNGEFEKVTELPCSGDIDLSCNQIVE 313

Query: 185 ---EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGEITKLDL 226
               D+     +L++                 K L L+   L +IP E++    +T LDL
Sbjct: 314 LDLPDMEYSIHKLNLGQNRLKDFPNIKCLKEIKTLILQKNMLGSIPLEMFTGTSLTALDL 373

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S NS    P  +++C +L  L +S N +   PD   +  + L  L L  N + ++P +  
Sbjct: 374 SSNSFNAFPMSITTCTNLVLLNMSNNYLDSLPDISYSCFAKLEALLLGINIIDRLP-ETM 432

Query: 287 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
            ++  L  L L +N ++ +PE+    S+  L EL+L   Q+ E P     L  L IL+LS
Sbjct: 433 SELTNLTTLHLEHNKLSKIPES--LFSMTKLVELFLNCNQIPELPEKFSLLTNLEILELS 490

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            N ++ I     NL  + +LDLS N I   P +L  +  SL++L L  N
Sbjct: 491 CNYIKEITP-IVNLVGVKDLDLSTNQIEKCPSDLCGM-TSLRSLDLSYN 537



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 176/405 (43%), Gaps = 60/405 (14%)

Query: 26  TELIASKNLLNGMP--ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           T+++     L   P  E    L  ++ +D+  NRI  IPS I+    L +F   +N +  
Sbjct: 7   TKIVKHAKNLTEFPQEEVKKELKTVVLIDVSMNRIQEIPSQINSIPKLQKFRGNDNMIKT 66

Query: 84  LPAELGKLSKLGTLDLHSNQLKEYC-----VEACQLRLSV------------------LD 120
           LP+++  +  L TLDL SN LK +C         ++ LS+                  +D
Sbjct: 67  LPSQIN-IPTLKTLDLSSNHLKRFCKSIKLTSLTEINLSINQITKIDDDFGSLHALRFMD 125

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS-- 178
           LS N +  +P  + K+T+L  + ++ N L +  + L+   +  +LK   +++    +   
Sbjct: 126 LSINRIQSVPKHLSKLTSLTFIDISNNLLTSFPTPLLELSSLIVLKVKENKITTIPNGMS 185

Query: 179 --------EASTTKEDLITMA----TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                   + S  K D IT +    T+LSV    L +    ++ I  +I     I ++D+
Sbjct: 186 KMSNLQILDISNNKIDKITPSLCKLTKLSV----LDVSANPINEINDQIQNLTTIKEIDI 241

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV---PS 283
           S + ++ LP    S   L+ L L    +K  P A L   + +S L L N    +V   P 
Sbjct: 242 SYSPLKTLPKSFMSLVGLRKLTLQHTSVK-VPPAGLQKFTKVSELNLSNGEFEKVTELPC 300

Query: 284 DGFKDIPMLQIL-----DLSYNIAS-------LPENPPFSSLPHLQELYLRRMQLREAPT 331
            G  D+   QI+     D+ Y+I         L + P    L  ++ L L++  L   P 
Sbjct: 301 SGDIDLSCNQIVELDLPDMEYSIHKLNLGQNRLKDFPNIKCLKEIKTLILQKNMLGSIPL 360

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           ++     L  LDLS NS  + P      T+L  L++S+N + +LP
Sbjct: 361 EMFTGTSLTALDLSSNSFNAFPMSITTCTNLVLLNMSNNYLDSLP 405


>gi|323449088|gb|EGB04979.1| hypothetical protein AURANDRAFT_54961 [Aureococcus anophagefferens]
          Length = 942

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 141/303 (46%), Gaps = 40/303 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++LD+ GN++     +L A  T LTEL A  N +  +P+ +  L  L+   L  NR+  
Sbjct: 214 LTRLDISGNRIAAFPADL-AKMTALTELDARDNAVKALPKNLAGLRGLVAFPLDGNRLEK 272

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +  ++ G  +L       N L +L AE+ +L  +  +DL  N+L     E  QLR    L
Sbjct: 273 LDDALKGLRALKLLSAPRNGLRSLTAEIAQLRFVKQVDLDGNELASLPKEITQLRSCERL 332

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
             + N L+ LP   G M  L+ L+L  N    +   L                       
Sbjct: 333 TFAKNRLAELPKGFGSMFRLQALVLRSNKFDKIDGDL----------------------- 369

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                     +A+ +S+T  EL      ++A P ++   G++T+LDLSRN +  +P E+ 
Sbjct: 370 ----------LASLVSLT--ELDFSDNAVAAFPKKLCRLGKLTRLDLSRNKLWFVPKEIR 417

Query: 240 SCASLQTLILSRNKIK--DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           S   L+   L  N++K  D   A + +L +L  L L +N L ++P + F D+P L+ L L
Sbjct: 418 SLGELKFFHLHENRLKTADMSRAEVATLKALEVLTLHDNYLEELPPE-FADLPRLRKLTL 476

Query: 298 SYN 300
           S+N
Sbjct: 477 SHN 479



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 176/415 (42%), Gaps = 48/415 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV GN+L      L      L  L ASKN +   P  +  L  L  LDL +N ++ +P 
Sbjct: 73  LDVSGNRLRTFPREL-QDLDKLRVLRASKNRIAWFPAHLWQLGALEELDLCENVLVELPM 131

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK------------------ 105
            +     L E  +  N L+  P +L  L  L TLDL  N L                   
Sbjct: 132 EVGNLALLQETRLRGNKLAKWPNQLDSLKNLETLDLSKNDLAHMAPVRVAQSEEQKTAAV 191

Query: 106 ------------EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
                       + C  A    L+ LD+S N ++  P ++ KMT L +L    N ++ L 
Sbjct: 192 KPGEVAIGAPDPKQCDWAGLASLTRLDISGNRIAAFPADLAKMTALTELDARDNAVKALP 251

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEA--------STTKEDLITMATRLSVTS--KELSL 203
            +L             +RL + +D+          S  +  L ++   ++     K++ L
Sbjct: 252 KNLAGLRGLVAFPLDGNRLEKLDDALKGLRALKLLSAPRNGLRSLTAEIAQLRFVKQVDL 311

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +G  L+++P EI +     +L  ++N + ELP    S   LQ L+L  NK       +L 
Sbjct: 312 DGNELASLPKEITQLRSCERLTFAKNRLAELPKGFGSMFRLQALVLRSNKFDKIDGDLLA 371

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
           SL SL+ L   +N +   P    + +  L  LDLS N +  +P+     SL  L+  +L 
Sbjct: 372 SLVSLTELDFSDNAVAAFPKKLCR-LGKLTRLDLSRNKLWFVPKE--IRSLGELKFFHLH 428

Query: 323 RMQLREAP---TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
             +L+ A     ++  L+ L +L L  N L+ +P  F +L  L +L LS N  +A
Sbjct: 429 ENRLKTADMSRAEVATLKALEVLTLHDNYLEELPPEFADLPRLRKLTLSHNPCAA 483



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 162/358 (45%), Gaps = 29/358 (8%)

Query: 44  SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 103
           S+  L  LD+  NR+  +     G  +L    +  N L   P EL  L KL  L    N+
Sbjct: 43  SIETLTELDVSDNRLSRLQKDFGGLFNLEVLDVSGNRLRTFPRELQDLDKLRVLRASKNR 102

Query: 104 LKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS---SLVNG 159
           +  +     QL  L  LDL  N L  LP E+G +  L++  L GN L    +   SL N 
Sbjct: 103 IAWFPAHLWQLGALEELDLCENVLVELPMEVGNLALLQETRLRGNKLAKWPNQLDSLKNL 162

Query: 160 PTPALLK-----YLRSRLPENEDSEASTTKEDLITM----------ATRLSVTSKELSLE 204
            T  L K         R+ ++E+ + +  K   + +          A   S+T   L + 
Sbjct: 163 ETLDLSKNDLAHMAPVRVAQSEEQKTAAVKPGEVAIGAPDPKQCDWAGLASLT--RLDIS 220

Query: 205 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 264
           G  ++A P+++ +   +T+LD   N+++ LP  L+    L    L  N+++   DA L  
Sbjct: 221 GNRIAAFPADLAKMTALTELDARDNAVKALPKNLAGLRGLVAFPLDGNRLEKLDDA-LKG 279

Query: 265 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRR 323
           L +L  L    N LR + ++    +  ++ +DL  N +ASLP+    + L   + L   +
Sbjct: 280 LRALKLLSAPRNGLRSLTAE-IAQLRFVKQVDLDGNELASLPKE--ITQLRSCERLTFAK 336

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEG--FKNLTSLTELDLSDNNISALPPEL 379
            +L E P     + +L+ L L  N    I +G    +L SLTELD SDN ++A P +L
Sbjct: 337 NRLAELPKGFGSMFRLQALVLRSNKFDKI-DGDLLASLVSLTELDFSDNAVAAFPKKL 393


>gi|326506262|dbj|BAJ86449.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1135

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 184/391 (47%), Gaps = 21/391 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 59
           ++ L++ GN  T      +   T L EL    N L G +P  IG    L  L L  N   
Sbjct: 326 LTVLNLSGNAFTGDVPAAVGQLTALQELRLGGNALTGTVPPEIGRCGALQVLALEDNLFS 385

Query: 60  S-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQL--R 115
             +P+++ G   L E Y+G N+    +PA+LG LS L TL + +N+L         L   
Sbjct: 386 GEVPAALGGLRRLREVYLGGNSFEGQIPADLGNLSWLETLSIPNNRLTGGLPNELFLLGN 445

Query: 116 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           L+VLDLS+N L+G +PP +G +  L+ L L+GN       S +       L  LR+    
Sbjct: 446 LTVLDLSDNKLAGEIPPAVGSLPALQSLNLSGNAFSGRIPSTIGN-----LLNLRALDLS 500

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-E 233
            + + +     +L  +     V+  + S  G ++    S +W    +  L++S NS    
Sbjct: 501 GQKNLSGNLPTELFGLPQLQHVSLADNSFSG-DVPEGFSSLWS---LRHLNISVNSFAGS 556

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ-VPSDGFKDIPML 292
           +P      ASLQ L  S N+I     A L + S+L+ L L  N L   +PSD    +  L
Sbjct: 557 IPATYGYMASLQVLSASHNRISGEVPAELANCSNLTVLDLSGNHLTGPIPSD-LSRLDEL 615

Query: 293 QILDLSYNIASLPENPPFSSLPHLQELYLRRMQL-REAPTDILRLQQLRILDLSQNSLQ- 350
           + LDLS+N  S    P  S++  L  L L    L  E P  +  L +L+ LDLS NS+  
Sbjct: 616 EELDLSHNQLSSKIPPEISNISSLATLKLDDNHLVGEIPASLANLSKLQALDLSSNSITG 675

Query: 351 SIPEGFKNLTSLTELDLSDNNISA-LPPELG 380
           SIP     + SL   ++S N+++  +PP LG
Sbjct: 676 SIPVSLAQIPSLVSFNVSHNDLAGEIPPVLG 706



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 201/455 (44%), Gaps = 96/455 (21%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
            L + GN L  +    +AS   L  L  S+NLL+G                      +IP
Sbjct: 230 HLSLRGNALRGILPAAVASIPSLQILSVSRNLLSG----------------------AIP 267

Query: 63  SSISGC---CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK----EYCVEACQLR 115
           ++  G     SL    +G+N  S +    G    L  +DL  N+L      + VEA    
Sbjct: 268 AAAFGGERNSSLRILQLGDNQFSMVDVSGGLGKGLQVVDLGGNKLGGPFPTWLVEAQG-- 325

Query: 116 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR----------------TLRSSLVN 158
           L+VL+LS N+ +G +P  +G++T L++L L GN L                  L  +L +
Sbjct: 326 LTVLNLSGNAFTGDVPAAVGQLTALQELRLGGNALTGTVPPEIGRCGALQVLALEDNLFS 385

Query: 159 GPTPALLKYLRSRLPE---NEDSEASTTKEDL--ITMATRLSVTSKELSLEGMNLSAIPS 213
           G  PA L  LR RL E     +S       DL  ++    LS+ +  L+        +P+
Sbjct: 386 GEVPAALGGLR-RLREVYLGGNSFEGQIPADLGNLSWLETLSIPNNRLT------GGLPN 438

Query: 214 EIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
           E++  G +T LDLS N +  E+PP + S  +LQ+L LS N       + + +L +L  L 
Sbjct: 439 ELFLLGNLTVLDLSDNKLAGEIPPAVGSLPALQSLNLSGNAFSGRIPSTIGNLLNLRALD 498

Query: 273 LDN--NPLRQVPSDGFKDIPMLQILDLSYNIAS--LPENPPFSSLPHLQEL--------- 319
           L    N    +P++ F  +P LQ + L+ N  S  +PE   FSSL  L+ L         
Sbjct: 499 LSGQKNLSGNLPTELFG-LPQLQHVSLADNSFSGDVPEG--FSSLWSLRHLNISVNSFAG 555

Query: 320 -------YLRRMQL---------REAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSL 362
                  Y+  +Q+          E P ++     L +LDLS N L   IP     L  L
Sbjct: 556 SIPATYGYMASLQVLSASHNRISGEVPAELANCSNLTVLDLSGNHLTGPIPSDLSRLDEL 615

Query: 363 TELDLSDNNISA-LPPELGLLEPSLQALRLDGNPL 396
            ELDLS N +S+ +PPE+  +  SL  L+LD N L
Sbjct: 616 EELDLSHNQLSSKIPPEISNIS-SLATLKLDDNHL 649



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 163/405 (40%), Gaps = 54/405 (13%)

Query: 41  TIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSAL--PAELGKLSKLGTL 97
            + SL  L +L L  N +  +IP +++   SL   ++ +NALS    P+ L  L+ L T 
Sbjct: 77  ALASLRHLQKLSLRSNALTGAIPPALARLASLRAVFLQDNALSGPIPPSFLANLTGLETF 136

Query: 98  DLHSNQLKEYCVEACQLRLSVLDLSNNSLSG--------------------------LPP 131
           D+ +N L      A    L  LDLS+N+ SG                          +P 
Sbjct: 137 DVSANLLSGPVPPALPPGLKYLDLSSNAFSGTIPAGAGASAAKLQHFNLSFNRLRGTVPA 196

Query: 132 EIGKMTTLRKLLLTGNPLR-TLRSSLVNGPTPALLK------YLRSRLPENEDSEAS--- 181
            +G +  L  L L GN L  T+ S+L N    ALL        LR  LP    S  S   
Sbjct: 197 SLGALQDLHYLWLDGNLLEGTIPSALAN--CSALLHLSLRGNALRGILPAAVASIPSLQI 254

Query: 182 -TTKEDLITMATRLSVTSKE-------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
            +   +L++ A   +    E       L L     S +         +  +DL  N +  
Sbjct: 255 LSVSRNLLSGAIPAAAFGGERNSSLRILQLGDNQFSMVDVSGGLGKGLQVVDLGGNKLGG 314

Query: 234 -LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
             P  L     L  L LS N       A +  L++L  L+L  N L             L
Sbjct: 315 PFPTWLVEAQGLTVLNLSGNAFTGDVPAAVGQLTALQELRLGGNALTGTVPPEIGRCGAL 374

Query: 293 QILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQ- 350
           Q+L L  N+ S         L  L+E+YL       + P D+  L  L  L +  N L  
Sbjct: 375 QVLALEDNLFSGEVPAALGGLRRLREVYLGGNSFEGQIPADLGNLSWLETLSIPNNRLTG 434

Query: 351 SIPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGN 394
            +P     L +LT LDLSDN ++  +PP +G L P+LQ+L L GN
Sbjct: 435 GLPNELFLLGNLTVLDLSDNKLAGEIPPAVGSL-PALQSLNLSGN 478



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 129/295 (43%), Gaps = 30/295 (10%)

Query: 115 RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            L  L L +N+L+G +PP + ++ +LR + L  N L        +GP P       S L 
Sbjct: 83  HLQKLSLRSNALTGAIPPALARLASLRAVFLQDNAL--------SGPIPP------SFLA 128

Query: 174 ENEDSEASTTKEDLIT--MATRLSVTSKELSLEGMNLSA-IPSEIW-EAGEITKLDLSRN 229
                E      +L++  +   L    K L L     S  IP+     A ++   +LS N
Sbjct: 129 NLTGLETFDVSANLLSGPVPPALPPGLKYLDLSSNAFSGTIPAGAGASAAKLQHFNLSFN 188

Query: 230 SIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
            ++  +P  L +   L  L L  N ++    + L + S+L  L L  N LR +       
Sbjct: 189 RLRGTVPASLGALQDLHYLWLDGNLLEGTIPSALANCSALLHLSLRGNALRGILPAAVAS 248

Query: 289 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL-----QQLRILD 343
           IP LQIL +S N+  L    P ++    +   LR +QL +    ++ +     + L+++D
Sbjct: 249 IPSLQILSVSRNL--LSGAIPAAAFGGERNSSLRILQLGDNQFSMVDVSGGLGKGLQVVD 306

Query: 344 LSQNSLQS-IPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGNPL 396
           L  N L    P        LT L+LS N  +  +P  +G L  +LQ LRL GN L
Sbjct: 307 LGGNKLGGPFPTWLVEAQGLTVLNLSGNAFTGDVPAAVGQLT-ALQELRLGGNAL 360


>gi|169260659|gb|ACA52056.1| densin 11-21 [Rattus norvegicus]
          Length = 495

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 180/390 (46%), Gaps = 62/390 (15%)

Query: 35  LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 93
           L  +P+ + +  R L  L L  N+I  +P  +  C +L +  + +N LS+LP  +  L  
Sbjct: 39  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVN 98

Query: 94  LGTLDLHSNQLKEY--CVEACQ----------------------LRLSVLDLSNNSLSGL 129
           L  LD+  N ++E+   ++ C+                      L L+ L L++  L  L
Sbjct: 99  LKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFL 158

Query: 130 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 189
           P   G++  LR L L  N L+TL  S+       L +  R  L  NE SE     + +  
Sbjct: 159 PANFGRLVKLRILELRENHLKTLPKSM-----HKLAQLERLDLGNNEFSELPEVLDQIQN 213

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
           +        +EL ++   L  +P  I +   +  LD+S+N I+ +  ++S C +L+ L+L
Sbjct: 214 L--------RELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLL 265

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS------ 303
           S N ++  PD+I   L  L+ LK+D+N L  +P +   ++ +L+  D S N         
Sbjct: 266 SSNMLQQLPDSI-GLLKKLTTLKVDDNQLTMLP-NTIGNLSLLEEFDCSCNELESLPPTI 323

Query: 304 ---------------LPENP-PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
                          LPE P    S  ++  + LR  +L   P +I ++Q+LR+L+LS N
Sbjct: 324 GYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDN 383

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L+++P  F  L  L  L LSDN   AL P
Sbjct: 384 RLKNLPFSFTKLKELAALWLSDNQSKALIP 413



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 113/210 (53%), Gaps = 10/210 (4%)

Query: 208 LSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
           L  +P E++     + +L L  N I+ELP +L +C +L+ L +  N +   P +I  SL 
Sbjct: 39  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSI-ASLV 97

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
           +L  L +  N +++ P +  K    L I++ S N I+ LP+   F+ L +L +LYL    
Sbjct: 98  NLKELDISKNGVQEFP-ENIKCCKCLTIIEASVNPISKLPDG--FTQLLNLTQLYLNDAF 154

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L   P +  RL +LRIL+L +N L+++P+    L  L  LDL +N  S LP  L  ++ +
Sbjct: 155 LEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQ-N 213

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           L+ L +D N L+ +  +I   G   +L YL
Sbjct: 214 LRELWMDNNALQVLPGSI---GKLKMLVYL 240



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 144/319 (45%), Gaps = 62/319 (19%)

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N    AL  
Sbjct: 21  CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN--CQAL-- 76

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                                           ++LS+   +LS++P+ I     + +LD+
Sbjct: 77  --------------------------------RKLSIPDNDLSSLPTSIASLVNLKELDI 104

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S+N +QE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 105 SKNGVQEFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 162

Query: 287 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLP-------HLQELYLRRM 324
             +  L+IL+L  N + +LP+              N  FS LP       +L+EL++   
Sbjct: 163 GRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNN 222

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
            L+  P  I +L+ L  LD+S+N ++++        +L +L LS N +  LP  +GLL+ 
Sbjct: 223 ALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLK- 281

Query: 385 SLQALRLDGNPLRSIRRTI 403
            L  L++D N L  +  TI
Sbjct: 282 KLTTLKVDDNQLTMLPNTI 300



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 120/247 (48%), Gaps = 17/247 (6%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           +N L  +P+++  L++L RLDL  N    +P  +    +L E +M NNAL  LP  +GKL
Sbjct: 175 ENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKL 234

Query: 92  SKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
             L  LD+  N+++  +  +  C+  L  L LS+N L  LP  IG +  L  L +  N L
Sbjct: 235 KMLVYLDMSKNRIETVDMDISGCE-ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQL 293

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
             L +++ N      L  L       E+ + S  + + +        + + L+++   L 
Sbjct: 294 TMLPNTIGN------LSLL-------EEFDCSCNELESLPPTIGYLHSLRTLAVDENFLP 340

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P EI     +T + L  N ++ LP E+     L+ L LS N++K+ P +  T L  L+
Sbjct: 341 ELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFS-FTKLKELA 399

Query: 270 CLKLDNN 276
            L L +N
Sbjct: 400 ALWLSDN 406



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 108/256 (42%), Gaps = 38/256 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI +
Sbjct: 191 LERLDLGNNEFSELPE-VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIET 249

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +   ISGC +L +  + +N L  LP  +G L KL TL +  NQL         L  L   
Sbjct: 250 VDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEF 309

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D S N L  LPP IG + +LR L +  N L                      LP    S 
Sbjct: 310 DCSCNELESLPPTIGYLHSLRTLAVDENFL--------------------PELPREIGSC 349

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            + T                 +SL    L  +P EI +   +  L+LS N ++ LP   +
Sbjct: 350 KNVTV----------------MSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFT 393

Query: 240 SCASLQTLILSRNKIK 255
               L  L LS N+ K
Sbjct: 394 KLKELAALWLSDNQSK 409


>gi|418726673|ref|ZP_13285284.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960583|gb|EKO24337.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 447

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 192/416 (46%), Gaps = 51/416 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L +E N++TVL    I     L EL  + N L  +P+ I  L  L  L L  NRI ++P 
Sbjct: 24  LKLEENRITVLPRE-INKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPK 82

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  +  N L  LP E+G+L  L  L+L +N++K    E   L  L + +LS
Sbjct: 83  EIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLS 142

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS------------LVNGPTPALLKYLRS 170
            N L+ +P EIG +  LR L L  N L+TL               L+N       K +++
Sbjct: 143 GNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLFEERKKIQA 202

Query: 171 RLPENE----DSEASTTKEDL-ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
            LP+ +    D E   T  +L + +   L + S  LSLE    S  P EI +   +  L 
Sbjct: 203 LLPDCDIDLRDVEEGETYRNLNLALEQPLKILS--LSLEYQQFSLFPKEILKLKNLRSLS 260

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPS 283
           L   S+  LP E+     L+ L L  N++K  P  I  L +L SL      NN    +P 
Sbjct: 261 LYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGA--NNEFEVLP- 317

Query: 284 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
              K+I  LQ                     +L+ L L + + +  P +I +L++L IL+
Sbjct: 318 ---KEIARLQ---------------------NLRSLLLNQNRFKIFPKEIWKLKKLVILN 353

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           ++ N L ++PE    L  L  LDLS N ++ LP E+G L  +L  L L  N ++++
Sbjct: 354 VNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLH-NLTELYLQYNRIKTL 408



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 147/354 (41%), Gaps = 54/354 (15%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           +DL + +    P  I     L    +  N ++ LP E+ KL  L  L L+ N+L     E
Sbjct: 1   MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L  L++L L NN +S LP EI K   L++L L GN L TL   +        L    
Sbjct: 61  IWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLEN 120

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           +R                                    +  +P+EI     +   +LS N
Sbjct: 121 NR------------------------------------IKILPNEIGALENLWIFNLSGN 144

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  +P E+ +  +L+ L L  N++K  P   +  L  L  L L  NPL       F++ 
Sbjct: 145 KLASIPKEIGNLQNLRMLYLENNQLKTLPRQ-MEKLQDLEVLNLLINPLL------FEER 197

Query: 290 PMLQIL--DLSYNIASLPENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLR 340
             +Q L  D   ++  + E   + +L         +  L L   Q    P +IL+L+ LR
Sbjct: 198 KKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFSLFPKEILKLKNLR 257

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            L L   SL ++P+    L  L  L L  N + +LP E+GLL  +L++L +  N
Sbjct: 258 SLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLR-NLRSLDIGAN 310



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 97/197 (49%), Gaps = 6/197 (3%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           + L     +  P EIWE   +  L L  N I  LP E++   +L+ L L+ NK+   P  
Sbjct: 1   MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I   L +L+ L+L NN +  +P +  K    LQ L+L  N + +LP       L     L
Sbjct: 61  I-WELENLTILRLKNNRISTLPKEIEKS-KNLQELNLRGNRLVTLPGEIGELKLLEELNL 118

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
              R+++   P +I  L+ L I +LS N L SIP+   NL +L  L L +N +  LP ++
Sbjct: 119 ENNRIKI--LPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQM 176

Query: 380 GLLEPSLQALRLDGNPL 396
             L+  L+ L L  NPL
Sbjct: 177 EKLQ-DLEVLNLLINPL 192



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 22  WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W +  L  L  + N L+ +PE IG L  L  LDL  NR+ ++PS I    +L E Y+  N
Sbjct: 344 WKLKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYN 403

Query: 80  ALSALPAELGKLSKLGTLDLHSN 102
            +  LP E+ +L  L  L L+ N
Sbjct: 404 RIKTLPEEIARLQNLRKLTLYEN 426


>gi|114599989|ref|XP_001162676.1| PREDICTED: protein LAP2 isoform 2 [Pan troglodytes]
 gi|397514431|ref|XP_003827491.1| PREDICTED: protein LAP2 isoform 4 [Pan paniscus]
 gi|410217136|gb|JAA05787.1| erbb2 interacting protein [Pan troglodytes]
 gi|410260626|gb|JAA18279.1| erbb2 interacting protein [Pan troglodytes]
 gi|410300754|gb|JAA28977.1| erbb2 interacting protein [Pan troglodytes]
 gi|410354911|gb|JAA44059.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1302

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|55770895|ref|NP_001006600.1| protein LAP2 isoform 7 [Homo sapiens]
          Length = 1302

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|418707313|ref|ZP_13268139.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772360|gb|EKR47548.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 378

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 143/299 (47%), Gaps = 21/299 (7%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N L  +P+ I  L  L  L L+ N++ + P  I    SL + Y+ NN L+ LP E+G+
Sbjct: 78  SDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQ 137

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  L+L +NQLK    E  QL+ L  L L NN L+  P EIGK+  L+ L L+ N L
Sbjct: 138 LQNLRELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQL 197

Query: 150 RTLRSSLVNGPTPALLK-YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 208
            T    +  G    L + YL        D++ +T  +++  +     +       +    
Sbjct: 198 TTFPKEI--GKLQNLQELYLH-------DNQLTTFTKEIGQLKNLRILLLNNNQFK---- 244

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
             +P EI     +  L L  N  + LP E+    +LQ L LS N+ K  P      L +L
Sbjct: 245 -ILPEEIGHLKNLQALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTIP-VEFGQLKNL 302

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
             L LD N L  +P +  K +  L++L+L  N + ++P+      L +LQ LYLR  QL
Sbjct: 303 KMLSLDANQLTALPKEIGK-LKNLKMLNLDANQLTTIPK--EIGQLQNLQTLYLRNNQL 358



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 150/325 (46%), Gaps = 41/325 (12%)

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
            L ALP ++G+L  L  LDL  NQL     E  QL+ L  L L+ N L+  P EI ++ +
Sbjct: 58  KLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKS 117

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L KL L+ N L  L         P  +  L++                            
Sbjct: 118 LHKLYLSNNQLTIL---------PVEIGQLQNL--------------------------- 141

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           +EL+L    L  I  EI +   + KL L  N +   P E+    +L++L LS N++  +P
Sbjct: 142 RELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFP 201

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 318
             I   L +L  L L +N L     +  +   +  +L  +     LPE      L +LQ 
Sbjct: 202 KEI-GKLQNLQELYLHDNQLTTFTKEIGQLKNLRILLLNNNQFKILPE--EIGHLKNLQA 258

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           LYL   Q +  P +I +LQ L++L LS N  ++IP  F  L +L  L L  N ++ALP E
Sbjct: 259 LYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE 318

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTI 403
           +G L+ +L+ L LD N L +I + I
Sbjct: 319 IGKLK-NLKMLNLDANQLTTIPKEI 342



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 112/278 (40%), Gaps = 61/278 (21%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+LT+L    I     L EL    N L  + + I  L  L +L L  N++ +
Sbjct: 118 LHKLYLSNNQLTILPVE-IGQLQNLRELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTA 176

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------ 114
            P  I    +L   ++ NN L+  P E+GKL  L  L LH NQL  +  E  QL      
Sbjct: 177 FPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLHDNQLTTFTKEIGQLKNLRIL 236

Query: 115 ------------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
                              L  L L +N    LP EIG++  L+ L L+ N  +T+    
Sbjct: 237 LLNNNQFKILPEEIGHLKNLQALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTI---- 292

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                P     L++                            K LSL+   L+A+P EI 
Sbjct: 293 -----PVEFGQLKN---------------------------LKMLSLDANQLTALPKEIG 320

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
           +   +  L+L  N +  +P E+    +LQTL L  N++
Sbjct: 321 KLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQL 358



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 97/193 (50%), Gaps = 3/193 (1%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L L    L A+P +I +   +  LDLS N +  LP E+    +LQ L
Sbjct: 39  LTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 98

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 307
            L+ N++  +P  I   L SL  L L NN L  +P +    +  L+ L+L +N      +
Sbjct: 99  FLNYNQLTTFPKEI-EQLKSLHKLYLSNNQLTILPVE-IGQLQNLRELNL-WNNQLKTIS 155

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                L +LQ+LYL   QL   P +I +LQ L+ L LS N L + P+    L +L EL L
Sbjct: 156 KEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYL 215

Query: 368 SDNNISALPPELG 380
            DN ++    E+G
Sbjct: 216 HDNQLTTFTKEIG 228


>gi|298250400|ref|ZP_06974204.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297548404|gb|EFH82271.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 384

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 173/341 (50%), Gaps = 20/341 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L ++ N++T L + ++     L  L    N L+ +P ++  L RL  L L++NR+ +
Sbjct: 54  LQELYLDDNQITTLPH-VLGKLVNLRALHVDMNRLSVLPSSLYHLPRLETLRLYKNRLTN 112

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ I     L +F +G N L++LP  L +L +L  L+L  NQL        QL +L +L
Sbjct: 113 LPADIGRLQGLRDFSVGKNQLTSLPESLWELGRLQALNLAENQLSSLSERIGQLTQLQML 172

Query: 120 DLSNNSLSGLPPEIGKMTTL-RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           D  +N L+ LP  +G++T L   L L+ N L TL  SL    T   L YL   + +N+ +
Sbjct: 173 DAGHNQLTTLPESLGQLTNLTHYLYLSNNRLTTLSESLFAHLTQ--LAYL--NITDNQLT 228

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E   +   L  +        KEL +    L+ +P E+     + +L    N ++ LP  L
Sbjct: 229 ELPRSLGCLTNL--------KELRIYNNQLATLPEELGNLAALRELHAMNNRLETLPDSL 280

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
                L+ L L+ N++   P   L  L++L+ L L NN L  +P+    ++  L+ LDL 
Sbjct: 281 GKLKQLRELRLANNRLARLP-TYLGELANLTSLDLRNNLLASLPA-SLDNLAKLRALDLR 338

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
            N + +LP  P    L HL++L LR ++L   PT + +L+Q
Sbjct: 339 ANRLTTLP--PGLQRLQHLEKLDLRWLKLSPLPTWLDQLEQ 377



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 171/378 (45%), Gaps = 63/378 (16%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           + N L  +PE +GSL +L  L L  N+I ++P  +    +L   ++  N LS LP+ L  
Sbjct: 37  TGNRLTALPEELGSLEQLQELYLDDNQITTLPHVLGKLVNLRALHVDMNRLSVLPSSLYH 96

Query: 91  LSKLGTLDLHSNQ-------------LKEYCVEACQL-----------RLSVLDLSNNSL 126
           L +L TL L+ N+             L+++ V   QL           RL  L+L+ N L
Sbjct: 97  LPRLETLRLYKNRLTNLPADIGRLQGLRDFSVGKNQLTSLPESLWELGRLQALNLAENQL 156

Query: 127 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 186
           S L   IG++T L+ L    N L TL  SL  G    L  YL        ++  +T  E 
Sbjct: 157 SSLSERIGQLTQLQMLDAGHNQLTTLPESL--GQLTNLTHYLYL-----SNNRLTTLSES 209

Query: 187 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQT 246
           L    T+L+     L++    L+ +P  +     + +L +  N +  LP EL + A+L+ 
Sbjct: 210 LFAHLTQLAY----LNITDNQLTELPRSLGCLTNLKELRIYNNQLATLPEELGNLAALRE 265

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP 305
           L    N+++  PD+ L  L  L  L+L NN L ++P+    ++  L  LDL  N +ASLP
Sbjct: 266 LHAMNNRLETLPDS-LGKLKQLRELRLANNRLARLPT-YLGELANLTSLDLRNNLLASLP 323

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
                                  A  D   L +LR LDL  N L ++P G + L  L +L
Sbjct: 324 -----------------------ASLD--NLAKLRALDLRANRLTTLPPGLQRLQHLEKL 358

Query: 366 DLSDNNISALPPELGLLE 383
           DL    +S LP  L  LE
Sbjct: 359 DLRWLKLSPLPTWLDQLE 376



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 158/338 (46%), Gaps = 23/338 (6%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL  NR+ ++P  +     L E Y+ +N ++ LP  LGKL  L  L +  N+L      
Sbjct: 34  LDLTGNRLTALPEELGSLEQLQELYLDDNQITTLPHVLGKLVNLRALHVDMNRLSVLPSS 93

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN-GPTPALLKYL 168
              L RL  L L  N L+ LP +IG++  LR   +  N L +L  SL   G   AL    
Sbjct: 94  LYHLPRLETLRLYKNRLTNLPADIGRLQGLRDFSVGKNQLTSLPESLWELGRLQAL---- 149

Query: 169 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN-LSAIPSEIWEAGEITK-LDL 226
              L EN+ S  S    + I   T+L +        G N L+ +P  + +   +T  L L
Sbjct: 150 --NLAENQLSSLS----ERIGQLTQLQMLDA-----GHNQLTTLPESLGQLTNLTHYLYL 198

Query: 227 SRNSIQELPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDG 285
           S N +  L   L +    L  L ++ N++ + P + L  L++L  L++ NN L  +P + 
Sbjct: 199 SNNRLTTLSESLFAHLTQLAYLNITDNQLTELPRS-LGCLTNLKELRIYNNQLATLPEEL 257

Query: 286 FKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
                + ++  ++  + +LP++     L  L+EL L   +L   PT +  L  L  LDL 
Sbjct: 258 GNLAALRELHAMNNRLETLPDS--LGKLKQLRELRLANNRLARLPTYLGELANLTSLDLR 315

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            N L S+P    NL  L  LDL  N ++ LPP L  L+
Sbjct: 316 NNLLASLPASLDNLAKLRALDLRANRLTTLPPGLQRLQ 353



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 135/320 (42%), Gaps = 64/320 (20%)

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N L+ALP ELG L +L  L L  NQ+                      + LP  +GK+  
Sbjct: 39  NRLTALPEELGSLEQLQELYLDDNQI----------------------TTLPHVLGKLVN 76

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           LR L +  N L  L SSL + P    L+  ++RL             +L     RL    
Sbjct: 77  LRALHVDMNRLSVLPSSLYHLPRLETLRLYKNRLT------------NLPADIGRLQGL- 123

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++ S+    L+++P  +WE G +  L+L+ N +  L   +     LQ L    N++   P
Sbjct: 124 RDFSVGKNQLTSLPESLWELGRLQALNLAENQLSSLSERIGQLTQLQMLDAGHNQLTTLP 183

Query: 259 DAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 316
           +++  LT+L+    L L NN L  +    F  +  L  L+++ N                
Sbjct: 184 ESLGQLTNLTH--YLYLSNNRLTTLSESLFAHLTQLAYLNITDN---------------- 225

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
                   QL E P  +  L  L+ L +  N L ++PE   NL +L EL   +N +  LP
Sbjct: 226 --------QLTELPRSLGCLTNLKELRIYNNQLATLPEELGNLAALRELHAMNNRLETLP 277

Query: 377 PELGLLEPSLQALRLDGNPL 396
             LG L+  L+ LRL  N L
Sbjct: 278 DSLGKLK-QLRELRLANNRL 296



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 91/201 (45%), Gaps = 29/201 (14%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITK--LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           LSL    L+A+P+ +      +   LDL+ N +  LP EL S   LQ L L  N+I   P
Sbjct: 9   LSLRYRGLTALPTSLSLHQLSSLRVLDLTGNRLTALPEELGSLEQLQELYLDDNQITTLP 68

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 318
             +L  L +L  L +D N L  +PS  +                          LP L+ 
Sbjct: 69  H-VLGKLVNLRALHVDMNRLSVLPSSLYH-------------------------LPRLET 102

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L L + +L   P DI RLQ LR   + +N L S+PE    L  L  L+L++N +S+L   
Sbjct: 103 LRLYKNRLTNLPADIGRLQGLRDFSVGKNQLTSLPESLWELGRLQALNLAENQLSSLSER 162

Query: 379 LGLLEPSLQALRLDGNPLRSI 399
           +G L   LQ L    N L ++
Sbjct: 163 IGQL-TQLQMLDAGHNQLTTL 182


>gi|74200782|dbj|BAE24769.1| unnamed protein product [Mus musculus]
          Length = 469

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 180/390 (46%), Gaps = 62/390 (15%)

Query: 35  LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 93
           L  +P+ + +  R L  L L  N+I  +P  +  C +L +  + +N LS+LP  +  L  
Sbjct: 39  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVN 98

Query: 94  LGTLDLHSNQLKEY--CVEACQ----------------------LRLSVLDLSNNSLSGL 129
           L  LD+  N ++E+   ++ C+                      L L+ L L++  L  L
Sbjct: 99  LKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFL 158

Query: 130 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 189
           P   G++  LR L L  N L+TL  S+       L +  R  L  NE SE     + +  
Sbjct: 159 PANFGRLVKLRILELRENHLKTLPKSM-----HKLAQLERLDLGNNEFSELPEVLDQIQN 213

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
           +        +EL ++   L  +P  I +   +  LD+S+N I+ +  ++S C +L+ L+L
Sbjct: 214 L--------RELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLL 265

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS------ 303
           S N ++  PD+I   L  L+ LK+D+N L  +P +   ++ +L+  D S N         
Sbjct: 266 SSNMLQQLPDSI-GLLKKLTTLKVDDNQLTMLP-NTIGNLSLLEEFDCSCNELESLPPTI 323

Query: 304 ---------------LPENP-PFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
                          LPE P    S  ++  + LR  +L   P +I ++Q+LR+L+LS N
Sbjct: 324 GYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDN 383

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L+++P  F  L  L  L LSDN   AL P
Sbjct: 384 RLKNLPFSFTKLKELAALWLSDNQSKALIP 413



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 113/210 (53%), Gaps = 10/210 (4%)

Query: 208 LSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
           L  +P E++     + +L L  N I+ELP +L +C +L+ L +  N +   P +I  SL 
Sbjct: 39  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSI-ASLV 97

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
           +L  L +  N +++ P +  K    L I++ S N I+ LP+   F+ L +L +LYL    
Sbjct: 98  NLKELDISKNGVQEFP-ENIKCCKCLTIIEASVNPISKLPDG--FTQLLNLTQLYLNDAF 154

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L   P +  RL +LRIL+L +N L+++P+    L  L  LDL +N  S LP  L  ++ +
Sbjct: 155 LEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQ-N 213

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           L+ L +D N L+ +  +I   G   +L YL
Sbjct: 214 LRELWMDNNALQVLPGSI---GKLKMLVYL 240



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 144/319 (45%), Gaps = 62/319 (19%)

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N    AL  
Sbjct: 21  CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN--CQAL-- 76

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                                           ++LS+   +LS++P+ I     + +LD+
Sbjct: 77  --------------------------------RKLSIPDNDLSSLPTSIASLVNLKELDI 104

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S+N +QE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 105 SKNGVQEFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 162

Query: 287 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLP-------HLQELYLRRM 324
             +  L+IL+L  N + +LP+              N  FS LP       +L+EL++   
Sbjct: 163 GRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNN 222

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
            L+  P  I +L+ L  LD+S+N ++++        +L +L LS N +  LP  +GLL+ 
Sbjct: 223 ALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLK- 281

Query: 385 SLQALRLDGNPLRSIRRTI 403
            L  L++D N L  +  TI
Sbjct: 282 KLTTLKVDDNQLTMLPNTI 300



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 120/247 (48%), Gaps = 17/247 (6%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           +N L  +P+++  L++L RLDL  N    +P  +    +L E +M NNAL  LP  +GKL
Sbjct: 175 ENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKL 234

Query: 92  SKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
             L  LD+  N+++  +  +  C+  L  L LS+N L  LP  IG +  L  L +  N L
Sbjct: 235 KMLVYLDMSKNRIETVDMDISGCE-ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQL 293

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
             L +++ N      L  L       E+ + S  + + +        + + L+++   L 
Sbjct: 294 TMLPNTIGN------LSLL-------EEFDCSCNELESLPPTIGYLHSLRTLAVDENFLP 340

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P EI     +T + L  N ++ LP E+     L+ L LS N++K+ P +  T L  L+
Sbjct: 341 ELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFS-FTKLKELA 399

Query: 270 CLKLDNN 276
            L L +N
Sbjct: 400 ALWLSDN 406



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 108/256 (42%), Gaps = 38/256 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI +
Sbjct: 191 LERLDLGNNEFSELPE-VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIET 249

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +   ISGC +L +  + +N L  LP  +G L KL TL +  NQL         L  L   
Sbjct: 250 VDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEF 309

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D S N L  LPP IG + +LR L +  N L                      LP    S 
Sbjct: 310 DCSCNELESLPPTIGYLHSLRTLAVDENFL--------------------PELPREIGSC 349

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            + T                 +SL    L  +P EI +   +  L+LS N ++ LP   +
Sbjct: 350 KNVTV----------------MSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFT 393

Query: 240 SCASLQTLILSRNKIK 255
               L  L LS N+ K
Sbjct: 394 KLKELAALWLSDNQSK 409


>gi|432102123|gb|ELK29932.1| Translocation protein SEC62 [Myotis davidii]
          Length = 1240

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 180/402 (44%), Gaps = 27/402 (6%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           L A+   L  +P  I  L  L  + L  N+I  IP  I    ++   Y+ NN LS L  +
Sbjct: 12  LDAANQNLATIPSGILELRELEEVHLENNQIEEIPEDIQYLANIKVLYLNNNRLSKLCLQ 71

Query: 88  LGKLSKLGTLDLHSNQ-LKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK-MTTLRKLLL 144
           LGKLS+L  LDL  N  L  +      +R L  L L    +  +P EI K +  L  L L
Sbjct: 72  LGKLSRLEGLDLSDNPILPSWVPVLSSIRSLRQLRLYRTQIGEIPTEICKHLHHLELLGL 131

Query: 145 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 204
           +GN L++L   +VN  T     YL+    E    E    +  +I            + L+
Sbjct: 132 SGNRLKSLPKEIVN-QTKLRELYLKQNQFEVFPPELCVLRNLVI------------IDLD 178

Query: 205 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--- 261
           G  L+A+P EI +   + K  ++RNS+Q LP  LS C  L  L LS N++   P ++   
Sbjct: 179 GNRLTALPEEIGKLTRLQKFYVARNSLQGLPESLSQCDQLSVLDLSYNRLHSLPRSLGLP 238

Query: 262 --LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL---DLSYNIASLPENPPFSSLPHL 316
               +LS L  L L  N     P + F    + ++    D    + S+PE+     L  L
Sbjct: 239 SDFGALSKLKILGLSGNQFISFPEEIFSLESLEKLYLGQDQGAKLTSVPED--IGKLQSL 296

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           +EL++    L   P  +  +  L +LD   N L+ +P+      +L EL L  N ++ LP
Sbjct: 297 KELHIENNHLEYLPVALGSMPNLEVLDCRHNLLKQLPDAICQAQALRELLLEKNLLTQLP 356

Query: 377 PELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
             L  L  +L  L L  NP+    + +   G +A+  YL +K
Sbjct: 357 ENLDSL-VNLDVLTLMDNPMEDPPKEVYTEGKEAIFTYLMNK 397



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 129/281 (45%), Gaps = 28/281 (9%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           GN+L  L   ++ + T L EL   +N     P  +  L  L+ +DL  NR+ ++P  I  
Sbjct: 133 GNRLKSLPKEIV-NQTKLRELYLKQNQFEVFPPELCVLRNLVIIDLDGNRLTALPEEIGK 191

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 127
              L +FY+  N+L  LP  L +  +L  LDL  N            RL  L  S     
Sbjct: 192 LTRLQKFYVARNSLQGLPESLSQCDQLSVLDLSYN------------RLHSLPRS----L 235

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
           GLP + G ++ L+ L L+GN   +    +      +L    +  L +++ ++ ++  ED+
Sbjct: 236 GLPSDFGALSKLKILGLSGNQFISFPEEIF-----SLESLEKLYLGQDQGAKLTSVPEDI 290

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
             + +      KEL +E  +L  +P  +     +  LD   N +++LP  +    +L+ L
Sbjct: 291 GKLQSL-----KELHIENNHLEYLPVALGSMPNLEVLDCRHNLLKQLPDAICQAQALREL 345

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           +L +N +   P+  L SL +L  L L +NP+   P + + +
Sbjct: 346 LLEKNLLTQLPEN-LDSLVNLDVLTLMDNPMEDPPKEVYTE 385


>gi|255070739|ref|XP_002507451.1| predicted protein [Micromonas sp. RCC299]
 gi|226522726|gb|ACO68709.1| predicted protein [Micromonas sp. RCC299]
          Length = 395

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/282 (32%), Positives = 134/282 (47%), Gaps = 38/282 (13%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           KL++E   LT      +   + L  L   +N L  +P  IG L+ L RL LH N + S+P
Sbjct: 129 KLELERFGLTGAVPAEVGRLSALKTLELWQNRLTSVPAEIGQLTSLERLRLHNNHLTSVP 188

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
           + I    SL    +G N L++LPAE+G+L+ L  L L+ NQL     E  QL  L  L L
Sbjct: 189 AEIGQLTSLKVLGLGGNQLTSLPAEIGRLTSLQELWLNGNQLTSLLAEIGQLTALEKLHL 248

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
           S N L+ +P EIG++T LR+L L  N L ++         PA +   RS           
Sbjct: 249 SRNQLTRVPVEIGQLTALRELYLQHNQLTSV---------PAEVGQHRS----------- 288

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
                            K LSL    L+++P+EI + G +  L L  N +  +P E+   
Sbjct: 289 ----------------LKVLSLYNNQLTSVPAEIGQLGWLKVLYLHNNQLTSVPAEIGQL 332

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
            SLQ L L  N++   P A +  L SL  L L+ N L ++P+
Sbjct: 333 TSLQELFLYNNQLTRVP-AEIGQLRSLERLDLNRNQLTRLPA 373



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 141/295 (47%), Gaps = 42/295 (14%)

Query: 82  SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 140
            A+PAE+G+LS L TL+L  N+L     E  QL  L  L L NN L+ +P EIG++T+L+
Sbjct: 139 GAVPAEVGRLSALKTLELWQNRLTSVPAEIGQLTSLERLRLHNNHLTSVPAEIGQLTSLK 198

Query: 141 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 200
            L L GN L +L         PA +  L S                            +E
Sbjct: 199 VLGLGGNQLTSL---------PAEIGRLTS---------------------------LQE 222

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L L G  L+++ +EI +   + KL LSRN +  +P E+    +L+ L L  N++   P A
Sbjct: 223 LWLNGNQLTSLLAEIGQLTALEKLHLSRNQLTRVPVEIGQLTALRELYLQHNQLTSVP-A 281

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
            +    SL  L L NN L  VP++    +  L++L L  N + S+P       L  LQEL
Sbjct: 282 EVGQHRSLKVLSLYNNQLTSVPAE-IGQLGWLKVLYLHNNQLTSVPAE--IGQLTSLQEL 338

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
           +L   QL   P +I +L+ L  LDL++N L  +P     L +   +   DN ++ 
Sbjct: 339 FLYNNQLTRVPAEIGQLRSLERLDLNRNQLTRLPAALCKLRATCCIVRLDNRVTV 393



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 88/157 (56%), Gaps = 2/157 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L + GN+LT L    I   T L +L  S+N L  +P  IG L+ L  L L  N++ S
Sbjct: 220 LQELWLNGNQLTSLLAE-IGQLTALEKLHLSRNQLTRVPVEIGQLTALRELYLQHNQLTS 278

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+ +    SL    + NN L+++PAE+G+L  L  L LH+NQL     E  QL  L  L
Sbjct: 279 VPAEVGQHRSLKVLSLYNNQLTSVPAEIGQLGWLKVLYLHNNQLTSVPAEIGQLTSLQEL 338

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            L NN L+ +P EIG++ +L +L L  N L  L ++L
Sbjct: 339 FLYNNQLTRVPAEIGQLRSLERLDLNRNQLTRLPAAL 375



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 23/255 (9%)

Query: 163 ALLKYLRSRLPENE---DSEASTTKEDLITMAT--RLSVTS------------KELSLEG 205
           A+   L+ R PE+E   D E  T +   +      R  +T             K L L  
Sbjct: 99  AMCPALQERWPEDEQPEDWEGVTMENGRVVKLELERFGLTGAVPAEVGRLSALKTLELWQ 158

Query: 206 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 265
             L+++P+EI +   + +L L  N +  +P E+    SL+ L L  N++   P A +  L
Sbjct: 159 NRLTSVPAEIGQLTSLERLRLHNNHLTSVPAEIGQLTSLKVLGLGGNQLTSLP-AEIGRL 217

Query: 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRM 324
           +SL  L L+ N L  + ++    +  L+ L LS N +  +P       L  L+ELYL+  
Sbjct: 218 TSLQELWLNGNQLTSLLAE-IGQLTALEKLHLSRNQLTRVP--VEIGQLTALRELYLQHN 274

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
           QL   P ++ + + L++L L  N L S+P     L  L  L L +N ++++P E+G L  
Sbjct: 275 QLTSVPAEVGQHRSLKVLSLYNNQLTSVPAEIGQLGWLKVLYLHNNQLTSVPAEIGQL-T 333

Query: 385 SLQALRLDGNPLRSI 399
           SLQ L L  N L  +
Sbjct: 334 SLQELFLYNNQLTRV 348


>gi|332233710|ref|XP_003266046.1| PREDICTED: protein LAP2 isoform 1 [Nomascus leucogenys]
          Length = 1370

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|434388110|ref|YP_007098721.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
 gi|428019100|gb|AFY95194.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
          Length = 563

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 188/407 (46%), Gaps = 38/407 (9%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           +T L   +  L  +P  I  +  L+ L +  N ++++P +I    SL E  +  N LSAL
Sbjct: 18  ITHLDLYQQRLTQLPARIVDIHSLVSLRVSDNELITLPENIGNLSSLRELRLYKNQLSAL 77

Query: 85  PAELGKLSKLGTLDLHSNQLKEY-CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +  L+ L +L L  N+ K +  + A  + L  L L+ N +  LP  + ++  L  + 
Sbjct: 78  PGSISHLTNLVSLSLSFNKFKIFPDIIASLINLKELKLNGNQIDILPESLLQLKKLVSID 137

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLP---------------ENEDSEASTT----- 183
           L+ NP+  L S L + P    +K+L   LP                N D   S       
Sbjct: 138 LSSNPIFDL-SILQSLPNLNHVKFLGVNLPCEYWVDLSKSTFIIRSNNDGSTSEIELPNA 196

Query: 184 --------KEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                   K++LI ++  + V    + L L    L+++P  I E   ++ L L  N +  
Sbjct: 197 NKLSLNLRKQNLIILSNEIGVYKWCQHLKLSHNYLNSLPDNIDELSNLSHLKLLNNQLTS 256

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP  +     L +L L RNK+ + PD+I  +L +L  L LD+N L ++P+    ++  L+
Sbjct: 257 LPESVGDLEKLISLDLRRNKLTELPDSI-GNLKNLKYLYLDDNLLEKLPA-TIGNLKQLE 314

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L LS N + SLPE         L  L +R  Q+ +  + I +L  L  LD  +N + S+
Sbjct: 315 YLHLSANKLTSLPE--ELGECKKLSYLDVRFNQIVKLESSIGKLSNLIELDAFRNKIASL 372

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           P+    L +L  L L +N+I  LP  L +L   L ++ L  NP+  I
Sbjct: 373 PDEIGGLCNLQHLQLDENHIKKLPETLKML-SKLTSISLIDNPVSDI 418



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 106/252 (42%), Gaps = 40/252 (15%)

Query: 42  IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 101
           IG       L L  N + S+P +I    +L+   + NN L++LP  +G L KL +LDL  
Sbjct: 215 IGVYKWCQHLKLSHNYLNSLPDNIDELSNLSHLKLLNNQLTSLPESVGDLEKLISLDLRR 274

Query: 102 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 160
           N+L E       L+ L  L L +N L  LP  IG +  L  L L+ N L +L   L  G 
Sbjct: 275 NKLTELPDSIGNLKNLKYLYLDDNLLEKLPATIGNLKQLEYLHLSANKLTSLPEEL--GE 332

Query: 161 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 220
              L  YL  R  +                                 +  + S I +   
Sbjct: 333 CKKL-SYLDVRFNQ---------------------------------IVKLESSIGKLSN 358

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
           + +LD  RN I  LP E+    +LQ L L  N IK  P+  L  LS L+ + L +NP+  
Sbjct: 359 LIELDAFRNKIASLPDEIGGLCNLQHLQLDENHIKKLPET-LKMLSKLTSISLIDNPVSD 417

Query: 281 VPSDGFKDIPML 292
           +     +D+P L
Sbjct: 418 ISI--LQDLPRL 427



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 4/152 (2%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
            L +  N L  L +N I   + L+ L    N L  +PE++G L +LI LDL +N++  +P
Sbjct: 223 HLKLSHNYLNSLPDN-IDELSNLSHLKLLNNQLTSLPESVGDLEKLISLDLRRNKLTELP 281

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLD 120
            SI    +L   Y+ +N L  LPA +G L +L  L L +N+L     E   C+ +LS LD
Sbjct: 282 DSIGNLKNLKYLYLDDNLLEKLPATIGNLKQLEYLHLSANKLTSLPEELGECK-KLSYLD 340

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           +  N +  L   IGK++ L +L    N + +L
Sbjct: 341 VRFNQIVKLESSIGKLSNLIELDAFRNKIASL 372



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 165/376 (43%), Gaps = 51/376 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI--LSI 61
           L +  NK  +  + +IAS   L EL  + N ++ +PE++  L +L+ +DL  N I  LSI
Sbjct: 90  LSLSFNKFKIFPD-IIASLINLKELKLNGNQIDILPESLLQLKKLVSIDLSSNPIFDLSI 148

Query: 62  PSSISGCCSLAEFYMGNNALSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
             S+     +   ++G N    LP E    LSK   +   +N      +E        L+
Sbjct: 149 LQSLPNLNHVK--FLGVN----LPCEYWVDLSKSTFIIRSNNDGSTSEIELPNANKLSLN 202

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           L   +L  L  EIG     + L L+ N                   YL S LP+N D  +
Sbjct: 203 LRKQNLIILSNEIGVYKWCQHLKLSHN-------------------YLNS-LPDNIDELS 242

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
           + +                 L L    L+++P  + +  ++  LDL RN + ELP  + +
Sbjct: 243 NLS----------------HLKLLNNQLTSLPESVGDLEKLISLDLRRNKLTELPDSIGN 286

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             +L+ L L  N ++  P A + +L  L  L L  N L  +P +   +   L  LD+ +N
Sbjct: 287 LKNLKYLYLDDNLLEKLP-ATIGNLKQLEYLHLSANKLTSLPEE-LGECKKLSYLDVRFN 344

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            I  L  +     L +L EL   R ++   P +I  L  L+ L L +N ++ +PE  K L
Sbjct: 345 QIVKLESS--IGKLSNLIELDAFRNKIASLPDEIGGLCNLQHLQLDENHIKKLPETLKML 402

Query: 360 TSLTELDLSDNNISAL 375
           + LT + L DN +S +
Sbjct: 403 SKLTSISLIDNPVSDI 418


>gi|198451591|ref|XP_001358430.2| GA18897 [Drosophila pseudoobscura pseudoobscura]
 gi|198131558|gb|EAL27569.2| GA18897 [Drosophila pseudoobscura pseudoobscura]
          Length = 1889

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 179/388 (46%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L+RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L++L L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFTQLKNLTILGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCDNMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I R+ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGRMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L IL L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFTQLKNLTILGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 91/159 (57%), Gaps = 2/159 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N+L  L N  I+    LT+L  ++NLL  +P+ I  LSRL  L L QNR+  
Sbjct: 223 LTYLDVSENRLEELPNE-ISGLVSLTDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQR 281

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +  ++  C ++ E  +  N LS LPA +G+++KL  L++  N L+   +E  Q   L VL
Sbjct: 282 LNDTLGNCDNMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEIGQCANLGVL 341

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
            L +N L  LPPE+G  T L  L ++GN L  L  SLVN
Sbjct: 342 SLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVN 380



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 117/240 (48%), Gaps = 20/240 (8%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            L  L L  N L+ L  +L N        L +   S LP +            I   T+L
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNCDNMQELILTENFLSELPAS------------IGRMTKL 315

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
           S     L+++   L  +P EI +   +  L L  N ++ LPPEL +C  L  L +S N++
Sbjct: 316 S----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQL 371



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  +   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFTQLKNLTILGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLETL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCDNMQELILTENFLSELPAS--IGRMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 SNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCDNMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|119571718|gb|EAW51333.1| erbb2 interacting protein, isoform CRA_b [Homo sapiens]
          Length = 1460

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|332233716|ref|XP_003266049.1| PREDICTED: protein LAP2 isoform 4 [Nomascus leucogenys]
          Length = 1345

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|443689982|gb|ELT92244.1| hypothetical protein CAPTEDRAFT_174612, partial [Capitella teleta]
          Length = 481

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 181/405 (44%), Gaps = 56/405 (13%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           GN+L  L + + A    L +L   +N L  +P TIG+ S+L  +++  NR+ S+P S+S 
Sbjct: 66  GNELKQLPDTM-AKMRDLQKLFLQENQLGALPHTIGAFSQLKVMNIVGNRVKSLPDSVSE 124

Query: 68  CCSLAEFYM-----------------------GNNALSALPAELGKLSKLGTLDLHSNQL 104
             +L E Y+                        +N L+ LP ++G LSKL  L++  N+L
Sbjct: 125 LSALEEIYLDENQLEGLPSSFVQLTCLQRLEISDNILAHLPKDIGNLSKLRVLNVSGNKL 184

Query: 105 KEYCVEACQLRLSV--LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 162
           +    E+     SV  +DLS+N LS LPP+     +L KL    N L++L   + + P  
Sbjct: 185 EGSLPESFGDISSVCEIDLSHNQLSELPPKCRFNQSLVKLFAEQNVLQSLPDWINHLPNV 244

Query: 163 ALLKYLRSRLPENEDSEA-STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 221
             L +  + L     +E+   T  DL           K L + G  +S +P  I    ++
Sbjct: 245 KHLSFRDNVLRRTPFTESFGETSTDL-----------KVLDISGNFISGLPESIGNLKKL 293

Query: 222 TKLDLSR-------------NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
            K+ +               N I +LP   S    L+   L  N+I + P+     L +L
Sbjct: 294 EKIQIGSVICELERRHFQNGNWIDQLPSRFSHMTMLKEAYLDENQISELPED-FGRLVNL 352

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQELYLRRMQLR 327
             + L  N LR++P D F  +  L++  LS N+   LPEN     L  L +L L   Q+ 
Sbjct: 353 EFIDLGQNQLRRLP-DSFCQLRSLRVCQLSKNLLECLPEN--IGELKSLVDLRLDNNQIS 409

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           + P+ +  L  L+ LDL  N    +P     LT+L  LD+ +N  
Sbjct: 410 DVPSSLGELSNLQSLDLFHNLFTELPACLSKLTNLVRLDVYENKF 454



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 181/414 (43%), Gaps = 76/414 (18%)

Query: 25  LTELIASKNLLNGMPETIG-SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           LTEL    N +  +P ++  +L +L       N +  +P +++    L + ++  N L A
Sbjct: 35  LTELFLDYNSICDLPASLFENLEKLTLFSAVGNELKQLPDTMAKMRDLQKLFLQENQLGA 94

Query: 84  LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 142
           LP  +G  S+L  +++  N++K       +L  L  + L  N L GLP    ++T L++L
Sbjct: 95  LPHTIGAFSQLKVMNIVGNRVKSLPDSVSELSALEEIYLDENQLEGLPSSFVQLTCLQRL 154

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 202
            ++ N L  L   + N      L  LR                        L+V+  +L 
Sbjct: 155 EISDNILAHLPKDIGN------LSKLRV-----------------------LNVSGNKL- 184

Query: 203 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 262
            EG    ++P    +   + ++DLS N + ELPP+     SL  L   +N ++  PD I 
Sbjct: 185 -EG----SLPESFGDISSVCEIDLSHNQLSELPPKCRFNQSLVKLFAEQNVLQSLPDWI- 238

Query: 263 TSLSSLSCLKLDNNPLRQVP-SDGFKDIPM-LQILDLSYN-IASLPEN------------ 307
             L ++  L   +N LR+ P ++ F +    L++LD+S N I+ LPE+            
Sbjct: 239 NHLPNVKHLSFRDNVLRRTPFTESFGETSTDLKVLDISGNFISGLPESIGNLKKLEKIQI 298

Query: 308 ----------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
                                   FS +  L+E YL   Q+ E P D  RL  L  +DL 
Sbjct: 299 GSVICELERRHFQNGNWIDQLPSRFSHMTMLKEAYLDENQISELPEDFGRLVNLEFIDLG 358

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           QN L+ +P+ F  L SL    LS N +  LP  +G L+ SL  LRLD N +  +
Sbjct: 359 QNQLRRLPDSFCQLRSLRVCQLSKNLLECLPENIGELK-SLVDLRLDNNQISDV 411



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 121/309 (39%), Gaps = 53/309 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 59
           + +L++  N L  L  + I + + L  L  S N L G +PE+ G +S +  +DL  N++ 
Sbjct: 151 LQRLEISDNILAHLPKD-IGNLSKLRVLNVSGNKLEGSLPESFGDISSVCEIDLSHNQLS 209

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY----CVEACQLR 115
            +P       SL + +   N L +LP  +  L  +  L    N L+              
Sbjct: 210 ELPPKCRFNQSLVKLFAEQNVLQSLPDWINHLPNVKHLSFRDNVLRRTPFTESFGETSTD 269

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG----PTPALLKYL--- 168
           L VLD+S N +SGLP  IG +  L K+ +        R    NG      P+   ++   
Sbjct: 270 LKVLDISGNFISGLPESIGNLKKLEKIQIGSVICELERRHFQNGNWIDQLPSRFSHMTML 329

Query: 169 -RSRLPENEDSEASTTKEDLITM---------------------ATRLSVTSK------- 199
             + L EN+ SE       L+ +                     + R+   SK       
Sbjct: 330 KEAYLDENQISELPEDFGRLVNLEFIDLGQNQLRRLPDSFCQLRSLRVCQLSKNLLECLP 389

Query: 200 ----------ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
                     +L L+   +S +PS + E   +  LDL  N   ELP  LS   +L  L +
Sbjct: 390 ENIGELKSLVDLRLDNNQISDVPSSLGELSNLQSLDLFHNLFTELPACLSKLTNLVRLDV 449

Query: 250 SRNKIK-DW 257
             NK + DW
Sbjct: 450 YENKFEMDW 458


>gi|326505078|dbj|BAK02926.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1171

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 183/391 (46%), Gaps = 21/391 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 59
           ++ L++ GN  T      +   T L EL    N L G +P  IG    L  L L  N   
Sbjct: 362 LTVLNLSGNAFTGDVPAAVGQLTALQELRLGGNALTGTVPPEIGRCGALQVLALEDNLFS 421

Query: 60  S-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQL--R 115
             +P+++ G   L E Y+G N+    +PA+LG LS L TL + +N+L         L   
Sbjct: 422 GEVPAALGGLRRLREVYLGGNSFEGQIPADLGNLSWLETLSIPNNRLTGGLPNELFLLGN 481

Query: 116 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           L+VLDLS+N L+G +PP +G +  L+ L L+GN       S +       L  LR+    
Sbjct: 482 LTVLDLSDNKLAGEIPPAVGSLPALQSLNLSGNAFSGRIPSTIGN-----LLNLRALDLS 536

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-E 233
            + + +     +L  +     V+  + S  G ++    S +W    +  L++S NS    
Sbjct: 537 GQKNLSGNLPTELFGLPQLQHVSLADNSFSG-DVPEGFSSLWS---LRHLNISVNSFAGS 592

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ-VPSDGFKDIPML 292
           +P      ASLQ L  S N+I     A L + S+L+ L L  N L   +PSD    +  L
Sbjct: 593 IPATYGYMASLQVLSASHNRISGEVPAELANCSNLTVLDLSGNHLTGPIPSD-LSRLDEL 651

Query: 293 QILDLSYNIASLPENPPFSSLPHLQELYLRRMQL-REAPTDILRLQQLRILDLSQNSLQ- 350
           + LDLS+N  S    P  S++  L  L L    L  E P  +  L +L+ LDLS NS+  
Sbjct: 652 EELDLSHNQLSSKIPPEISNISSLATLKLDDNHLVGEIPASLANLSKLQALDLSSNSITG 711

Query: 351 SIPEGFKNLTSLTELDLSDNNISA-LPPELG 380
           SIP     + SL   + S N+++  +PP LG
Sbjct: 712 SIPVSLAQIPSLVSFNASHNDLAGEIPPVLG 742



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 204/457 (44%), Gaps = 100/457 (21%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
            L + GN L  +    +AS   L  L  S+NLL+G                      +IP
Sbjct: 266 HLSLRGNALRGILPAAVASIPSLQILSVSRNLLSG----------------------AIP 303

Query: 63  SSISGC---CSLAEFYMGNNALSA--LPAELGKLSKLGTLDLHSNQLK----EYCVEACQ 113
           ++  G     SL    +G+N  S   +P  LGK   L  +DL  N+L      + VEA  
Sbjct: 304 AAAFGGERNSSLRILQLGDNQFSMVDVPGGLGK--GLQVVDLGGNKLGGPFPTWLVEAQG 361

Query: 114 LRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR----------------TLRSSL 156
             L+VL+LS N+ +G +P  +G++T L++L L GN L                  L  +L
Sbjct: 362 --LTVLNLSGNAFTGDVPAAVGQLTALQELRLGGNALTGTVPPEIGRCGALQVLALEDNL 419

Query: 157 VNGPTPALLKYLRSRLPE---NEDSEASTTKEDL--ITMATRLSVTSKELSLEGMNLSAI 211
            +G  PA L  LR RL E     +S       DL  ++    LS+ +  L+        +
Sbjct: 420 FSGEVPAALGGLR-RLREVYLGGNSFEGQIPADLGNLSWLETLSIPNNRLT------GGL 472

Query: 212 PSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           P+E++  G +T LDLS N +  E+PP + S  +LQ+L LS N       + + +L +L  
Sbjct: 473 PNELFLLGNLTVLDLSDNKLAGEIPPAVGSLPALQSLNLSGNAFSGRIPSTIGNLLNLRA 532

Query: 271 LKLDN--NPLRQVPSDGFKDIPMLQILDLSYNIAS--LPENPPFSSLPHLQEL------- 319
           L L    N    +P++ F  +P LQ + L+ N  S  +PE   FSSL  L+ L       
Sbjct: 533 LDLSGQKNLSGNLPTELFG-LPQLQHVSLADNSFSGDVPEG--FSSLWSLRHLNISVNSF 589

Query: 320 ---------YLRRMQL---------REAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLT 360
                    Y+  +Q+          E P ++     L +LDLS N L   IP     L 
Sbjct: 590 AGSIPATYGYMASLQVLSASHNRISGEVPAELANCSNLTVLDLSGNHLTGPIPSDLSRLD 649

Query: 361 SLTELDLSDNNISA-LPPELGLLEPSLQALRLDGNPL 396
            L ELDLS N +S+ +PPE+  +  SL  L+LD N L
Sbjct: 650 ELEELDLSHNQLSSKIPPEISNIS-SLATLKLDDNHL 685



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 167/407 (41%), Gaps = 58/407 (14%)

Query: 41  TIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSAL--PAELGKLSKLGTL 97
            + SL  L +L L  N +  +IP +++   SL   ++ +NALS    P+ L  L+ L T 
Sbjct: 113 ALASLRHLQKLSLRSNALTGAIPPALARLASLRAVFLQDNALSGPIPPSFLANLTGLETF 172

Query: 98  DLHSNQLKEYCVEACQLRLSVLDLSNNSLSG--------------------------LPP 131
           D+ +N L      A    L  LDLS+N+ SG                          +P 
Sbjct: 173 DVSANLLSGPVPPALPPGLKYLDLSSNAFSGTIPAGAGASAAKLQHFNLSFNRLRGTVPA 232

Query: 132 EIGKMTTLRKLLLTGNPLR-TLRSSLVNGPTPALLK------YLRSRLPENEDSEAS--- 181
            +G +  L  L L GN L  T+ S+L N    ALL        LR  LP    S  S   
Sbjct: 233 SLGALQDLHYLWLDGNLLEGTIPSALAN--CSALLHLSLRGNALRGILPAAVASIPSLQI 290

Query: 182 -TTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 231
            +   +L++ A   +    E         L     ++  +P  + +  ++  +DL  N +
Sbjct: 291 LSVSRNLLSGAIPAAAFGGERNSSLRILQLGDNQFSMVDVPGGLGKGLQV--VDLGGNKL 348

Query: 232 QE-LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
               P  L     L  L LS N       A +  L++L  L+L  N L            
Sbjct: 349 GGPFPTWLVEAQGLTVLNLSGNAFTGDVPAAVGQLTALQELRLGGNALTGTVPPEIGRCG 408

Query: 291 MLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSL 349
            LQ+L L  N+ S         L  L+E+YL       + P D+  L  L  L +  N L
Sbjct: 409 ALQVLALEDNLFSGEVPAALGGLRRLREVYLGGNSFEGQIPADLGNLSWLETLSIPNNRL 468

Query: 350 Q-SIPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGN 394
              +P     L +LT LDLSDN ++  +PP +G L P+LQ+L L GN
Sbjct: 469 TGGLPNELFLLGNLTVLDLSDNKLAGEIPPAVGSL-PALQSLNLSGN 514



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 129/295 (43%), Gaps = 30/295 (10%)

Query: 115 RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
            L  L L +N+L+G +PP + ++ +LR + L  N L        +GP P       S L 
Sbjct: 119 HLQKLSLRSNALTGAIPPALARLASLRAVFLQDNAL--------SGPIPP------SFLA 164

Query: 174 ENEDSEASTTKEDLIT--MATRLSVTSKELSLEGMNLSA-IPSEIW-EAGEITKLDLSRN 229
                E      +L++  +   L    K L L     S  IP+     A ++   +LS N
Sbjct: 165 NLTGLETFDVSANLLSGPVPPALPPGLKYLDLSSNAFSGTIPAGAGASAAKLQHFNLSFN 224

Query: 230 SIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
            ++  +P  L +   L  L L  N ++    + L + S+L  L L  N LR +       
Sbjct: 225 RLRGTVPASLGALQDLHYLWLDGNLLEGTIPSALANCSALLHLSLRGNALRGILPAAVAS 284

Query: 289 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL-----QQLRILD 343
           IP LQIL +S N+  L    P ++    +   LR +QL +    ++ +     + L+++D
Sbjct: 285 IPSLQILSVSRNL--LSGAIPAAAFGGERNSSLRILQLGDNQFSMVDVPGGLGKGLQVVD 342

Query: 344 LSQNSLQS-IPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGNPL 396
           L  N L    P        LT L+LS N  +  +P  +G L  +LQ LRL GN L
Sbjct: 343 LGGNKLGGPFPTWLVEAQGLTVLNLSGNAFTGDVPAAVGQLT-ALQELRLGGNAL 396


>gi|424843897|ref|ZP_18268522.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395322095|gb|EJF55016.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 736

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 161/343 (46%), Gaps = 48/343 (13%)

Query: 40  ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 99
           + +     L  LDL Q++I ++P        L +  +    L  LP+  G+L  L  L L
Sbjct: 396 QALSQFKDLEYLDLEQSQIEALPEDFGQLSKLCQLNLDQCQLKRLPSSFGQLQMLSGLQL 455

Query: 100 HSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
             NQLKE      +L +L  L+L  N LS L PEIG+   L+ L+L  N L+ L S++ N
Sbjct: 456 SKNQLKELPANFYELQKLQYLNLEGNQLSSLAPEIGQFKELKLLILAHNQLKELPSTISN 515

Query: 159 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN---LSAIPSEI 215
                 L          +D+     + +L  M        K+L+L  ++   L A+PS I
Sbjct: 516 CKKITYLNI--------QDNLVRQIQFNLEKM--------KQLTLLNLSDNLLQALPSSI 559

Query: 216 WEAGEITKLDLSRN-SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           ++A ++  L L  N  +Q+L P++    +L+TL L+   I+  P+ I   L+ L  L L 
Sbjct: 560 FQAKKLQFLQLDNNRDLQQLSPKIGQLQNLKTLWLNHCSIQKIPENI-GQLTQLQELYLS 618

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           NN L+        D+P+                     L  LQ+L+L   QL+  P +I 
Sbjct: 619 NNQLQ--------DLPI-----------------TIGQLTQLQKLHLNNNQLQSLPENIG 653

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN-ISALP 376
           +L+ L+ L L+ N L+S+P+    LT LT+L+L +N    A P
Sbjct: 654 QLKALKTLTLNNNQLKSLPKSIVQLTLLTDLELRNNKEFKAFP 696



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 149/326 (45%), Gaps = 43/326 (13%)

Query: 55  QNRILSI--PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 112
           Q+RI S     ++S    L    +  + + ALP + G+LSKL  L+L   QLK       
Sbjct: 386 QSRIFSSQDAQALSQFKDLEYLDLEQSQIEALPEDFGQLSKLCQLNLDQCQLKRLPSSFG 445

Query: 113 QLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 171
           QL+ LS L LS N L  LP    ++  L+ L L GN L +L       P     K L+  
Sbjct: 446 QLQMLSGLQLSKNQLKELPANFYELQKLQYLNLEGNQLSSL------APEIGQFKELK-- 497

Query: 172 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 231
                          L+ +A                L  +PS I    +IT L++  N +
Sbjct: 498 ---------------LLILAHN-------------QLKELPSTISNCKKITYLNIQDNLV 529

Query: 232 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 291
           +++   L     L  L LS N ++  P +I  +   L  L+LDNN   Q  S     +  
Sbjct: 530 RQIQFNLEKMKQLTLLNLSDNLLQALPSSIFQA-KKLQFLQLDNNRDLQQLSPKIGQLQN 588

Query: 292 LQILDLSY-NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
           L+ L L++ +I  +PEN     L  LQELYL   QL++ P  I +L QL+ L L+ N LQ
Sbjct: 589 LKTLWLNHCSIQKIPEN--IGQLTQLQELYLSNNQLQDLPITIGQLTQLQKLHLNNNQLQ 646

Query: 351 SIPEGFKNLTSLTELDLSDNNISALP 376
           S+PE    L +L  L L++N + +LP
Sbjct: 647 SLPENIGQLKALKTLTLNNNQLKSLP 672



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 164/381 (43%), Gaps = 54/381 (14%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  + + +G L++L  L L  N   +IP  ++    L   Y+  + + +LP +L  LSK+
Sbjct: 175 LQQLHKALGQLTKLEELCLSFNMFHNIPEELALAPKLHTLYLDQSPIDSLPDDLSVLSKI 234

Query: 95  GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL-LLTGNPLRTLR 153
                               RLS   L+  S + L P + ++  L+ L L   NP +  +
Sbjct: 235 K-------------------RLS---LARRSCTKLAP-LAQLKQLKALNLEYTNPYKYRQ 271

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
                    AL     ++L E E      + ED I++   + +      L  +NLS+I S
Sbjct: 272 IEHHPKAFEAL-----AQLSELEYLNLGASVEDSISLDFLIPLQQ----LRYLNLSSIKS 322

Query: 214 E------IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI---KDWPDAILTS 264
           +      +W   ++ +L L + ++Q       + A  +    S N     K  P A +  
Sbjct: 323 KKILADSLW--PQLEQLILDKTNLQ-----WDNQAWKKLFYFSANAGYTPKKLPKAAIEK 375

Query: 265 L-SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY-NIASLPENPPFSSLPHLQELYLR 322
           L   L  L+L +       +        L+ LDL    I +LPE+  F  L  L +L L 
Sbjct: 376 LPHQLLILELQSRIFSSQDAQALSQFKDLEYLDLEQSQIEALPED--FGQLSKLCQLNLD 433

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
           + QL+  P+   +LQ L  L LS+N L+ +P  F  L  L  L+L  N +S+L PE+G  
Sbjct: 434 QCQLKRLPSSFGQLQMLSGLQLSKNQLKELPANFYELQKLQYLNLEGNQLSSLAPEIGQF 493

Query: 383 EPSLQALRLDGNPLRSIRRTI 403
           +  L+ L L  N L+ +  TI
Sbjct: 494 K-ELKLLILAHNQLKELPSTI 513



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 49/205 (23%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI-- 58
           +  L++EGN+L+ L+   I  +  L  LI + N L  +P TI +  ++  L++  N +  
Sbjct: 473 LQYLNLEGNQLSSLAPE-IGQFKELKLLILAHNQLKELPSTISNCKKITYLNIQDNLVRQ 531

Query: 59  ---------------------LSIPSSISGCCSLAEFYMGNN------------------ 79
                                 ++PSSI     L    + NN                  
Sbjct: 532 IQFNLEKMKQLTLLNLSDNLLQALPSSIFQAKKLQFLQLDNNRDLQQLSPKIGQLQNLKT 591

Query: 80  ------ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 132
                 ++  +P  +G+L++L  L L +NQL++  +   QL +L  L L+NN L  LP  
Sbjct: 592 LWLNHCSIQKIPENIGQLTQLQELYLSNNQLQDLPITIGQLTQLQKLHLNNNQLQSLPEN 651

Query: 133 IGKMTTLRKLLLTGNPLRTLRSSLV 157
           IG++  L+ L L  N L++L  S+V
Sbjct: 652 IGQLKALKTLTLNNNQLKSLPKSIV 676



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 1/91 (1%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           +  +PE IG L++L  L L  N++  +P +I     L + ++ NN L +LP  +G+L  L
Sbjct: 599 IQKIPENIGQLTQLQELYLSNNQLQDLPITIGQLTQLQKLHLNNNQLQSLPENIGQLKAL 658

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 124
            TL L++NQLK       QL  L+ L+L NN
Sbjct: 659 KTLTLNNNQLKSLPKSIVQLTLLTDLELRNN 689



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 2/89 (2%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   T L EL  S N L  +P TIG L++L +L L+ N++ S+P +I    +L    + N
Sbjct: 606 IGQLTQLQELYLSNNQLQDLPITIGQLTQLQKLHLNNNQLQSLPENIGQLKALKTLTLNN 665

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEY 107
           N L +LP  + +L+ L  L+L +N  KE+
Sbjct: 666 NQLKSLPKSIVQLTLLTDLELRNN--KEF 692



 Score = 41.6 bits (96), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           +I +L+ LRIL L+   LQ + +    LT L EL LS N    +P EL  L P L  L L
Sbjct: 158 EIGQLKNLRILSLTYGRLQQLHKALGQLTKLEELCLSFNMFHNIPEELA-LAPKLHTLYL 216

Query: 392 DGNPLRSI 399
           D +P+ S+
Sbjct: 217 DQSPIDSL 224


>gi|358331524|dbj|GAA50326.1| leucine-rich repeat protein soc-2 homolog [Clonorchis sinensis]
          Length = 451

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 185/395 (46%), Gaps = 44/395 (11%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           +I S NL   +P+ +G L++L  LD   NRI ++P +I+ C  L    +  N +  LP+ 
Sbjct: 57  VIKSNNLQGPLPDDLGQLTKLQILDCSNNRITTVPDAIASCTKLMRLLLDYNCIGELPSS 116

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE-IGKMTTLRKLLLT 145
           +G L +L  L +  N+L     E  Q  +L+ L++  N +  LP + + KM +LR   L+
Sbjct: 117 IGSLKELQQLGIKYNRLTRLPTELAQCQQLTELNVEGNQIVRLPDDLLCKMPSLRSATLS 176

Query: 146 GNPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 204
                  R++    PT A+ + +    L  + ++  + + +D +  A RL    + LSL 
Sbjct: 177 -------RNAFSGFPTGAIGQLVHLEHLSMDYNNLDTVSTKDFVD-ADRL----RSLSLG 224

Query: 205 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 264
             N+  +     +  ++ +LDLS N I +LP +    A+L+ L L+ N +K+ P +I   
Sbjct: 225 NNNIVHLEIAASQWRQLVQLDLSYNRITKLPEDFCELANLEDLDLTSNWLKELPVSI-GK 283

Query: 265 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRM 324
           L+ L  L L+ N +  +P     ++  L++L+L  N                        
Sbjct: 284 LTRLVKLNLEFNHITYLPK-SIGELENLRVLNLDANC----------------------- 319

Query: 325 QLREAPTDI-LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN-ISALPPELGLL 382
            L   P  I   L  L  L L  N +Q +P    +L  LT L L +N  +  LP EL  L
Sbjct: 320 -LTRLPCAIGSNLHNLTSLKLEDNMIQRLPTQIGDLKQLTRLCLRNNKPLDQLPVELAAL 378

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
            P L  L L+G  LR I   I+  G  AV+KYL++
Sbjct: 379 -PLLSFLSLEGCNLRRIPEDIVQAGAGAVIKYLRN 412



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 122/288 (42%), Gaps = 40/288 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRIL 59
           +++L+VEGN++  L ++L+     L     S+N  +G P   IG L  L  L +  N + 
Sbjct: 146 LTELNVEGNQIVRLPDDLLCKMPSLRSATLSRNAFSGFPTGAIGQLVHLEHLSMDYNNLD 205

Query: 60  SIPS-SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 117
           ++ +        L    +GNN +  L     +  +L  LDL  N++ +   + C+L  L 
Sbjct: 206 TVSTKDFVDADRLRSLSLGNNNIVHLEIAASQWRQLVQLDLSYNRITKLPEDFCELANLE 265

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            LDL++N L  LP  IGK+T L KL L  N                 + YL   + E E+
Sbjct: 266 DLDLTSNWLKELPVSIGKLTRLVKLNLEFNH----------------ITYLPKSIGELEN 309

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPP 236
                                  L+L+   L+ +P  I      +T L L  N IQ LP 
Sbjct: 310 LRV--------------------LNLDANCLTRLPCAIGSNLHNLTSLKLEDNMIQRLPT 349

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           ++     L  L L  NK  D     L +L  LS L L+   LR++P D
Sbjct: 350 QIGDLKQLTRLCLRNNKPLDQLPVELAALPLLSFLSLEGCNLRRIPED 397



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 98/236 (41%), Gaps = 48/236 (20%)

Query: 6   VEGNKLTVLS---NNLI------ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 56
           V+ ++L  LS   NN++      + W  L +L  S N +  +PE    L+ L  LDL  N
Sbjct: 213 VDADRLRSLSLGNNNIVHLEIAASQWRQLVQLDLSYNRITKLPEDFCELANLEDLDLTSN 272

Query: 57  RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-CVEACQLR 115
            +  +P SI     L +  +  N ++ LP  +G+L  L  L+L +N L    C     L 
Sbjct: 273 WLKELPVSIGKLTRLVKLNLEFNHITYLPKSIGELENLRVLNLDANCLTRLPCAIGSNLH 332

Query: 116 -LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN-PLRTLRSSLVNGPTPALLKYLRSRLP 173
            L+ L L +N +  LP +IG +  L +L L  N PL  L   L   P   LL +      
Sbjct: 333 NLTSLKLEDNMIQRLPTQIGDLKQLTRLCLRNNKPLDQLPVELAALP---LLSF------ 383

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                                      LSLEG NL  IP +I +AG    +   RN
Sbjct: 384 ---------------------------LSLEGCNLRRIPEDIVQAGAGAVIKYLRN 412


>gi|434387880|ref|YP_007098491.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
 gi|428018870|gb|AFY94964.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
          Length = 709

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 199/446 (44%), Gaps = 67/446 (15%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N+LT L +  I   T LTEL  +   L  +PE+IG+LS+L RL +   +I  +P SI   
Sbjct: 26  NQLTFLPDT-IGDLTDLTELHITWFSLTSLPESIGNLSKLTRLYVRNTKIARLPESIGNL 84

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDL-HSNQLKEYCVEACQL-RLSVLDLSNNSL 126
            +L E  +  N +  LP  +G LS L  L+L H+ +L E       L +L+ L+LS   +
Sbjct: 85  SNLKELDLTWNLIEILPTSIGDLSNLTHLNLSHATKLAELPDSIGNLSKLTYLNLSAGVI 144

Query: 127 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP--ALLKYLRSRLPENEDSEASTTK 184
           + LP  IG +  L+ L L      +  S L   PT   +L      +L  +  S    T 
Sbjct: 145 TTLPESIGNLDRLKHLNL------SWCSQLQQIPTAIGSLKNLTHIQLWGSGQSSIFKTI 198

Query: 185 EDLITMA--TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
           E L   +  T L + S         +  IP  I    ++T LDLS N +  LP  +    
Sbjct: 199 EQLGAQSNLTHLYINSSS-------IVTIPESIGNLSKLTHLDLSHNRLNSLPESIGLLK 251

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS------------------- 283
           +L  L L  N I   P +I   L +L+ L L +N L +  S                   
Sbjct: 252 NLVWLNLKCNNIAILPISI-EHLVNLTYLNLYSNKLLRNRSESIGKLINLNYLNLSNNKV 310

Query: 284 ----DGFKDIPMLQILDLSYN-IASLPEN---------------------PPFSSLPHLQ 317
               DG  ++ ML  L L  N + SLPEN                       F +L +L+
Sbjct: 311 DILFDGIGNLKMLNELHLGNNCLTSLPENIGKLTKLSCLQLINNKIVDLTKNFGNLVNLR 370

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L L    +   P DI  L++L+ L L +N+L+ +P+   NLTSL+ LDL  N IS LP 
Sbjct: 371 KLNLNGNNINRLPDDIGNLKKLKELYLWKNNLEKLPDSIGNLTSLSILDLGRNQISELPD 430

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  +++ L L  N L  +  TI
Sbjct: 431 TIGNLH-NIEKLDLYKNRLTCLPETI 455



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 182/380 (47%), Gaps = 48/380 (12%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           LT L  + + +  +PE+IG+LS+L  LDL  NR+ S+P SI    +L    +  N ++ L
Sbjct: 207 LTHLYINSSSIVTIPESIGNLSKLTHLDLSHNRLNSLPESIGLLKNLVWLNLKCNNIAIL 266

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEAC------------------------QLR-LSVL 119
           P  +  L  L  L+L+SN+L     E+                          L+ L+ L
Sbjct: 267 PISIEHLVNLTYLNLYSNKLLRNRSESIGKLINLNYLNLSNNKVDILFDGIGNLKMLNEL 326

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---SSLVNGPTPALLKYLRSRLPENE 176
            L NN L+ LP  IGK+T L  L L  N +  L     +LVN     L     +RLP++ 
Sbjct: 327 HLGNNCLTSLPENIGKLTKLSCLQLINNKIVDLTKNFGNLVNLRKLNLNGNNINRLPDD- 385

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
                      I    +L    KEL L   NL  +P  I     ++ LDL RN I ELP 
Sbjct: 386 -----------IGNLKKL----KELYLWKNNLEKLPDSIGNLTSLSILDLGRNQISELPD 430

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
            + +  +++ L L +N++   P+ I ++L S+S L L  N ++ +P +G  ++  L+ L 
Sbjct: 431 TIGNLHNIEKLDLYKNRLTCLPETI-SNLQSISHLYLQRNYIKLLP-EGMGNLTNLKKLK 488

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           +  N +  LPE+    +  +LQ L +R  +LR  P  I  L  L  LD + N L  IP+ 
Sbjct: 489 IWNNRLRCLPESIGNLA-ANLQSLKIRNNRLRCLPESIGNLVNLNSLDCTNNLLTDIPKN 547

Query: 356 FKNLTSLTELDLSDNNISAL 375
             N+T+L  L+L+ N ++ L
Sbjct: 548 IGNITNLKTLNLTKNPLTDL 567



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 193/402 (48%), Gaps = 21/402 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ-NRILSIPSSISGCCSLAEFYM- 76
           I + + LT L  S  ++  +PE+IG+L RL  L+L   +++  IP++I    +L    + 
Sbjct: 128 IGNLSKLTYLNLSAGVITTLPESIGNLDRLKHLNLSWCSQLQQIPTAIGSLKNLTHIQLW 187

Query: 77  --GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 133
             G +++     +LG  S L  L ++S+ +         L +L+ LDLS+N L+ LP  I
Sbjct: 188 GSGQSSIFKTIEQLGAQSNLTHLYINSSSIVTIPESIGNLSKLTHLDLSHNRLNSLPESI 247

Query: 134 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS-----------T 182
           G +  L  L L  N +  L  S+ +      L    ++L  N                  
Sbjct: 248 GLLKNLVWLNLKCNNIAILPISIEHLVNLTYLNLYSNKLLRNRSESIGKLINLNYLNLSN 307

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
            K D++           EL L    L+++P  I +  +++ L L  N I +L     +  
Sbjct: 308 NKVDILFDGIGNLKMLNELHLGNNCLTSLPENIGKLTKLSCLQLINNKIVDLTKNFGNLV 367

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           +L+ L L+ N I   PD I  +L  L  L L  N L ++P D   ++  L ILDL  N I
Sbjct: 368 NLRKLNLNGNNINRLPDDI-GNLKKLKELYLWKNNLEKLP-DSIGNLTSLSILDLGRNQI 425

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
           + LP+     +L ++++L L + +L   P  I  LQ +  L L +N ++ +PEG  NLT+
Sbjct: 426 SELPD--TIGNLHNIEKLDLYKNRLTCLPETISNLQSISHLYLQRNYIKLLPEGMGNLTN 483

Query: 362 LTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L +L + +N +  LP  +G L  +LQ+L++  N LR +  +I
Sbjct: 484 LKKLKIWNNRLRCLPESIGNLAANLQSLKIRNNRLRCLPESI 525



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 30/194 (15%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I + T L+ L   +N ++ +P+TIG+L  + +LDL++NR+  +P +IS   S++  Y+  
Sbjct: 409 IGNLTSLSILDLGRNQISELPDTIGNLHNIEKLDLYKNRLTCLPETISNLQSISHLYLQR 468

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYC-----------VEACQLR------------ 115
           N +  LP  +G L+ L  L + +N+L+  C           +++ ++R            
Sbjct: 469 NYIKLLPEGMGNLTNLKKLKIWNNRLR--CLPESIGNLAANLQSLKIRNNRLRCLPESIG 526

Query: 116 ----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL-LKYLRS 170
               L+ LD +NN L+ +P  IG +T L+ L LT NPL  L    V    P L + +LR 
Sbjct: 527 NLVNLNSLDCTNNLLTDIPKNIGNITNLKTLNLTKNPLTDLTDLSVLQTIPNLTVHWLRV 586

Query: 171 RLPENEDSEASTTK 184
            LP    ++ S  K
Sbjct: 587 FLPRRYWTKVSDWK 600



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 117/277 (42%), Gaps = 37/277 (13%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLI-----------------------RLDLHQ 55
           I +  ML EL    N L  +PE IG L++L                        +L+L+ 
Sbjct: 317 IGNLKMLNELHLGNNCLTSLPENIGKLTKLSCLQLINNKIVDLTKNFGNLVNLRKLNLNG 376

Query: 56  NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 115
           N I  +P  I     L E Y+  N L  LP  +G L+ L  LDL  NQ+ E       L 
Sbjct: 377 NNINRLPDDIGNLKKLKELYLWKNNLEKLPDSIGNLTSLSILDLGRNQISELPDTIGNLH 436

Query: 116 -LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
            +  LDL  N L+ LP  I  + ++  L L  N ++ L   + N      LK   +RL  
Sbjct: 437 NIEKLDLYKNRLTCLPETISNLQSISHLYLQRNYIKLLPEGMGNLTNLKKLKIWNNRL-- 494

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
                     E +  +A  L    + L +    L  +P  I     +  LD + N + ++
Sbjct: 495 ------RCLPESIGNLAANL----QSLKIRNNRLRCLPESIGNLVNLNSLDCTNNLLTDI 544

Query: 235 PPELSSCASLQTLILSRNKIKDWPD-AILTSLSSLSC 270
           P  + +  +L+TL L++N + D  D ++L ++ +L+ 
Sbjct: 545 PKNIGNITNLKTLNLTKNPLTDLTDLSVLQTIPNLTV 581


>gi|402871705|ref|XP_003899794.1| PREDICTED: protein LAP2 isoform 1 [Papio anubis]
          Length = 1370

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 189/401 (47%), Gaps = 64/401 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG------------- 128
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S              
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 129 ----------LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
                     LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +
Sbjct: 143 LYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFT 197

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E     E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +
Sbjct: 198 EVPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGI 249

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S
Sbjct: 250 SACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCS 307

Query: 299 YN-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRL 336
           +N + +LP +                     P   S  ++  L+L   +L   P ++  +
Sbjct: 308 FNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDM 367

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 368 QKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388


>gi|169260657|gb|ACA52055.1| densin 11-17 [Rattus norvegicus]
          Length = 447

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 181/392 (46%), Gaps = 66/392 (16%)

Query: 35  LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 93
           L  +P+ + +  R L  L L  N+I  +P  +  C +L +  + +N LS+LP  +  L  
Sbjct: 39  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVN 98

Query: 94  LGTLDLHSNQLKEY--CVEACQ----------------------LRLSVLDLSNNSLSGL 129
           L  LD+  N ++E+   ++ C+                      L L+ L L++  L  L
Sbjct: 99  LKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFL 158

Query: 130 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 189
           P   G++  LR L L  N L+TL  S+       L +  R  L  NE SE     + +  
Sbjct: 159 PANFGRLVKLRILELRENHLKTLPKSM-----HKLAQLERLDLGNNEFSELPEVLDQIQN 213

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
           +        +EL ++   L  +P  I +   +  LD+S+N I+ +  ++S C +L+ L+L
Sbjct: 214 L--------RELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLL 265

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 308
           S N ++  PD+I   L  L+ LK+D+N L  +P +   ++ +L+  D S N + SLP  P
Sbjct: 266 SSNMLQQLPDSI-GLLKKLTTLKVDDNQLTMLP-NTIGNLSLLEEFDCSCNELESLP--P 321

Query: 309 PFSSLPHLQELY-----------------------LRRMQLREAPTDILRLQQLRILDLS 345
               L  L+ L                        LR  +L   P +I ++Q+LR+L+LS
Sbjct: 322 TIGYLHSLRTLAVDENFLPELPREIGSRKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLS 381

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            N L+++P  F  L  L  L LSDN   AL P
Sbjct: 382 DNRLKNLPFSFTKLKELAALWLSDNQSKALIP 413



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 113/210 (53%), Gaps = 10/210 (4%)

Query: 208 LSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
           L  +P E++     + +L L  N I+ELP +L +C +L+ L +  N +   P +I  SL 
Sbjct: 39  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSI-ASLV 97

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
           +L  L +  N +++ P +  K    L I++ S N I+ LP+   F+ L +L +LYL    
Sbjct: 98  NLKELDISKNGVQEFP-ENIKCCKCLTIIEASVNPISKLPDG--FTQLLNLTQLYLNDAF 154

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L   P +  RL +LRIL+L +N L+++P+    L  L  LDL +N  S LP  L  ++ +
Sbjct: 155 LEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQ-N 213

Query: 386 LQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           L+ L +D N L+ +  +I   G   +L YL
Sbjct: 214 LRELWMDNNALQVLPGSI---GKLKMLVYL 240



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 144/319 (45%), Gaps = 62/319 (19%)

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N    AL  
Sbjct: 21  CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN--CQAL-- 76

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                                           ++LS+   +LS++P+ I     + +LD+
Sbjct: 77  --------------------------------RKLSIPDNDLSSLPTSIASLVNLKELDI 104

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S+N +QE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 105 SKNGVQEFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 162

Query: 287 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLP-------HLQELYLRRM 324
             +  L+IL+L  N + +LP+              N  FS LP       +L+EL++   
Sbjct: 163 GRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNN 222

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
            L+  P  I +L+ L  LD+S+N ++++        +L +L LS N +  LP  +GLL+ 
Sbjct: 223 ALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLK- 281

Query: 385 SLQALRLDGNPLRSIRRTI 403
            L  L++D N L  +  TI
Sbjct: 282 KLTTLKVDDNQLTMLPNTI 300



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 111/256 (43%), Gaps = 38/256 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI +
Sbjct: 191 LERLDLGNNEFSELPE-VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIET 249

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +   ISGC +L +  + +N L  LP  +G L KL TL +  NQL         L  L   
Sbjct: 250 VDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEF 309

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D S N L  LPP IG + +LR L +  N L                      LP      
Sbjct: 310 DCSCNELESLPPTIGYLHSLRTLAVDENFL--------------------PELPRE---- 345

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                     + +R +VT   +SL    L  +P EI +   +  L+LS N ++ LP   +
Sbjct: 346 ----------IGSRKNVTV--MSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFT 393

Query: 240 SCASLQTLILSRNKIK 255
               L  L LS N+ K
Sbjct: 394 KLKELAALWLSDNQSK 409



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 120/247 (48%), Gaps = 17/247 (6%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           +N L  +P+++  L++L RLDL  N    +P  +    +L E +M NNAL  LP  +GKL
Sbjct: 175 ENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKL 234

Query: 92  SKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
             L  LD+  N+++  +  +  C+  L  L LS+N L  LP  IG +  L  L +  N L
Sbjct: 235 KMLVYLDMSKNRIETVDMDISGCE-ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQL 293

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
             L +++ N      L  L       E+ + S  + + +        + + L+++   L 
Sbjct: 294 TMLPNTIGN------LSLL-------EEFDCSCNELESLPPTIGYLHSLRTLAVDENFLP 340

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P EI     +T + L  N ++ LP E+     L+ L LS N++K+ P +  T L  L+
Sbjct: 341 ELPREIGSRKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFS-FTKLKELA 399

Query: 270 CLKLDNN 276
            L L +N
Sbjct: 400 ALWLSDN 406


>gi|8923909|ref|NP_061165.1| protein LAP2 isoform 2 [Homo sapiens]
 gi|8572221|gb|AAF77048.1|AF263744_1 erbb2-interacting protein ERBIN [Homo sapiens]
 gi|20521800|dbj|BAA86539.2| KIAA1225 protein [Homo sapiens]
 gi|119571719|gb|EAW51334.1| erbb2 interacting protein, isoform CRA_c [Homo sapiens]
 gi|168269750|dbj|BAG10002.1| erbb2 interacting protein [synthetic construct]
          Length = 1371

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|358679311|ref|NP_001240626.1| protein LAP2 isoform 1 [Homo sapiens]
 gi|116242614|sp|Q96RT1.2|LAP2_HUMAN RecName: Full=Protein LAP2; AltName: Full=Densin-180-like protein;
           AltName: Full=Erbb2-interacting protein; Short=Erbin
 gi|119571720|gb|EAW51335.1| erbb2 interacting protein, isoform CRA_d [Homo sapiens]
          Length = 1412

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|348524302|ref|XP_003449662.1| PREDICTED: protein LAP2 [Oreochromis niloticus]
          Length = 1352

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 174/400 (43%), Gaps = 85/400 (21%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  N LTVL    IA+   L EL  SKN +   PE I +   L  ++   N I  
Sbjct: 76  LNRLSMPDNDLTVLPA-AIANLINLRELDVSKNSIQDFPENIKNCKGLAIVEASVNPISK 134

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P   +   SL + Y+ +  L  LPA  G+L+KL  L+L  NQLK       +L +L  L
Sbjct: 135 LPEGFTQLLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMQKLTQLERL 194

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL +N  + +P  + ++T L++L + GN L  L         P +L  L+          
Sbjct: 195 DLGSNEFTEVPEVVEQLTGLKELWMDGNKLTFL---------PGMLGTLK---------- 235

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                                   ++  LD+S+N+++ +  ++ 
Sbjct: 236 ----------------------------------------QLVYLDVSKNNLEMVDEQIC 255

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C +LQ L+LS N +   P +I T L  L+ LK+D N L  +P D    +  +  LD S+
Sbjct: 256 GCENLQDLLLSNNALTQLPGSIGT-LKKLTALKVDENQLMYLP-DSIGGLTCIDELDCSF 313

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP                       P   +      L+L   +L   P ++  +Q
Sbjct: 314 NEIEALPATIGQCVNMRTFAADHNFLAQLPPEMGNWKRATVLFLHSNKLESLPEEMGDMQ 373

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  LT LT + LS+N    L P
Sbjct: 374 KLKVINLSNNKLKNLPYSFTKLTELTAMWLSENQSKPLIP 413



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 5/188 (2%)

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
           T +EL L+   +  +P +++    + +L +  N +  LP  +++  +L+ L +S+N I+D
Sbjct: 52  TLQELYLDANQIEELPKQLFNCQLLNRLSMPDNDLTVLPAAIANLINLRELDVSKNSIQD 111

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLPH 315
           +P+ I  +   L+ ++   NP+ ++P +GF  +  L +  L  N A L   P  F  L  
Sbjct: 112 FPENI-KNCKGLAIVEASVNPISKLP-EGFTQL--LSLTQLYLNDAFLEFLPASFGRLTK 167

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           LQ L LR  QL+  P  + +L QL  LDL  N    +PE  + LT L EL +  N ++ L
Sbjct: 168 LQILELRENQLKMLPKSMQKLTQLERLDLGSNEFTEVPEVVEQLTGLKELWMDGNKLTFL 227

Query: 376 PPELGLLE 383
           P  LG L+
Sbjct: 228 PGMLGTLK 235



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 141/307 (45%), Gaps = 26/307 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQL L+ L + +N L+ LP  I  +
Sbjct: 38  SLETVPKEIFNFEKTLQELYLDANQIEELPKQLFNCQL-LNRLSMPDNDLTVLPAAIANL 96

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N    A+++      S+LPE                   
Sbjct: 97  INLRELDVSKNSIQDFPENIKNCKGLAIVEASVNPISKLPEG--------------FTQL 142

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           LS+T  +L L    L  +P+      ++  L+L  N ++ LP  +     L+ L L  N+
Sbjct: 143 LSLT--QLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMQKLTQLERLDLGSNE 200

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 313
             + P+ ++  L+ L  L +D N L  +P      +  L  LD+S N   + +       
Sbjct: 201 FTEVPE-VVEQLTGLKELWMDGNKLTFLPG-MLGTLKQLVYLDVSKNNLEMVDEQ-ICGC 257

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
            +LQ+L L    L + P  I  L++L  L + +N L  +P+    LT + ELD S N I 
Sbjct: 258 ENLQDLLLSNNALTQLPGSIGTLKKLTALKVDENQLMYLPDSIGGLTCIDELDCSFNEIE 317

Query: 374 ALPPELG 380
           ALP  +G
Sbjct: 318 ALPATIG 324



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 142/312 (45%), Gaps = 62/312 (19%)

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           C+   +  ++ LD S+ SL  +P EI     TL++L L  N +  L   L N        
Sbjct: 21  CLRGEEEIVTSLDYSHCSLETVPKEIFNFEKTLQELYLDANQIEELPKQLFN-------- 72

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                                  +  RLS+   +L++       +P+ I     + +LD+
Sbjct: 73  ---------------------CQLLNRLSMPDNDLTV-------LPAAIANLINLRELDV 104

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S+NSIQ+ P  + +C  L  +  S N I   P+   T L SL+ L L++  L  +P+  F
Sbjct: 105 SKNSIQDFPENIKNCKGLAIVEASVNPISKLPEG-FTQLLSLTQLYLNDAFLEFLPA-SF 162

Query: 287 KDIPMLQILDLSYN-IASLPEN--------------PPFSSLPH-------LQELYLRRM 324
             +  LQIL+L  N +  LP++                F+ +P        L+EL++   
Sbjct: 163 GRLTKLQILELRENQLKMLPKSMQKLTQLERLDLGSNEFTEVPEVVEQLTGLKELWMDGN 222

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
           +L   P  +  L+QL  LD+S+N+L+ + E      +L +L LS+N ++ LP  +G L+ 
Sbjct: 223 KLTFLPGMLGTLKQLVYLDVSKNNLEMVDEQICGCENLQDLLLSNNALTQLPGSIGTLK- 281

Query: 385 SLQALRLDGNPL 396
            L AL++D N L
Sbjct: 282 KLTALKVDENQL 293


>gi|441658612|ref|XP_004091272.1| PREDICTED: protein LAP2 [Nomascus leucogenys]
          Length = 1418

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|358679316|ref|NP_001240627.1| protein LAP2 isoform 4 [Homo sapiens]
          Length = 1346

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|194388158|dbj|BAG65463.1| unnamed protein product [Homo sapiens]
          Length = 1346

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|426384524|ref|XP_004058812.1| PREDICTED: protein LAP2 isoform 1 [Gorilla gorilla gorilla]
          Length = 1371

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|62472958|ref|NP_001014669.1| scribbled, isoform I [Drosophila melanogaster]
 gi|61679402|gb|AAX52996.1| scribbled, isoform I [Drosophila melanogaster]
          Length = 1711

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 155/360 (43%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
                                          N ++ELP E+S   SL  L L++N ++  
Sbjct: 230 ------------------------------ENRLEELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|354469152|ref|XP_003496994.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1-like [Cricetulus griseus]
          Length = 855

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 180/382 (47%), Gaps = 17/382 (4%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           KN+L  +PE++ SL  L  L+L  N++     S+     L    +  N + +LP E+ +L
Sbjct: 262 KNMLTNVPESLSSLKNLQVLNLEYNQLTIFSKSLCFLPKLISLNLTGNMIGSLPKEIREL 321

Query: 92  SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
             L  L +  N+L    VE  QL ++  L L++N L  + P+I     LR L L  N L+
Sbjct: 322 KNLENLLMDHNKLTFLSVEIFQLPKIKELQLADNKLEAISPKIENFRELRILNLDKNLLK 381

Query: 151 TLRSSLVNGPTPALLKYLRSRLPE--------NEDSEASTTKEDLITMATRLSVTSKELS 202
            +   L        L    + + E            +   ++  +I MA  +S  S  +S
Sbjct: 382 KIPKKLSRCVKLECLSLSDNSIEELPRKIHRLKNLKQLHVSRNKMIKMAEEISHLSNIIS 441

Query: 203 LE--GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           LE  G  ++ IP EI    +IT+++L+ N+I   P  L +  SL  L  + N I + P  
Sbjct: 442 LEFSGNQITHIPIEIKNCRKITRVELNYNNIMYFPVGLCALPSLDYLSFNGNYISEIPMD 501

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           +  S   L  L+L+ N L  V S+    +  L+ LD+  N I ++P     S++  L+ L
Sbjct: 502 VSFS-KQLLHLELNTNKL-PVLSEHLCSLTNLEYLDVGQNQIKTIPS--CISTMVSLRVL 557

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            +   +    P ++  L  L++LD+S+N LQ +P     L  + +L+LS N  S  P EL
Sbjct: 558 IVSGNKFETFPKELCALHNLQVLDISENQLQKLPSDITKLKGIQKLNLSSNRFSYFPVEL 617

Query: 380 GLLEPSLQALRLDGNPLRSIRR 401
             L+ +L+AL L     R + R
Sbjct: 618 CQLQ-TLEALYLSRTHGRMLTR 638



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 182/379 (48%), Gaps = 20/379 (5%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           T L  L AS N ++ +P+ +  L  + +L L+ N I ++PS +    +L    +G N L+
Sbjct: 207 TNLRILNASYNQISCIPKELLQLENMRQLFLNSNCIENLPSDLESLINLETLSLGKNMLT 266

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 141
            +P  L  L  L  L+L  NQL  +    C L +L  L+L+ N +  LP EI ++  L  
Sbjct: 267 NVPESLSSLKNLQVLNLEYNQLTIFSKSLCFLPKLISLNLTGNMIGSLPKEIRELKNLEN 326

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 201
           LL+  N L  L   +   P    L+   ++L      EA + K   I     L +    L
Sbjct: 327 LLMDHNKLTFLSVEIFQLPKIKELQLADNKL------EAISPK---IENFRELRI----L 373

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
           +L+   L  IP ++    ++  L LS NSI+ELP ++    +L+ L +SRNK+    + I
Sbjct: 374 NLDKNLLKKIPKKLSRCVKLECLSLSDNSIEELPRKIHRLKNLKQLHVSRNKMIKMAEEI 433

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY-NIASLPENPPFSSLPHLQELY 320
            + LS++  L+   N +  +P +  K+   +  ++L+Y NI   P      +LP L  L 
Sbjct: 434 -SHLSNIISLEFSGNQITHIPIE-IKNCRKITRVELNYNNIMYFPVG--LCALPSLDYLS 489

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
                + E P D+   +QL  L+L+ N L  + E   +LT+L  LD+  N I  +P  + 
Sbjct: 490 FNGNYISEIPMDVSFSKQLLHLELNTNKLPVLSEHLCSLTNLEYLDVGQNQIKTIPSCIS 549

Query: 381 LLEPSLQALRLDGNPLRSI 399
            +  SL+ L + GN   + 
Sbjct: 550 TM-VSLRVLIVSGNKFETF 567



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 184/419 (43%), Gaps = 47/419 (11%)

Query: 6   VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
           ++ NKLT LS   I     + EL  + N L  +   I +   L  L+L +N +  IP  +
Sbjct: 329 MDHNKLTFLSVE-IFQLPKIKELQLADNKLEAISPKIENFRELRILNLDKNLLKKIPKKL 387

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 124
           S C  L    + +N++  LP ++ +L  L  L +  N++ +   E   L  +  L+ S N
Sbjct: 388 SRCVKLECLSLSDNSIEELPRKIHRLKNLKQLHVSRNKMIKMAEEISHLSNIISLEFSGN 447

Query: 125 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 184
            ++ +P EI     + ++ L  N +      L   P+   L +  + + E          
Sbjct: 448 QITHIPIEIKNCRKITRVELNYNNIMYFPVGLCALPSLDYLSFNGNYISE---------- 497

Query: 185 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 244
              I M    S     L L    L  +   +     +  LD+ +N I+ +P  +S+  SL
Sbjct: 498 ---IPMDVSFSKQLLHLELNTNKLPVLSEHLCSLTNLEYLDVGQNQIKTIPSCISTMVSL 554

Query: 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 303
           + LI+S NK + +P   L +L +L  L +  N L+++PSD  K +  +Q L+LS N  + 
Sbjct: 555 RVLIVSGNKFETFPKE-LCALHNLQVLDISENQLQKLPSDITK-LKGIQKLNLSSNRFSY 612

Query: 304 LPENPPFSSLPHLQELYLRRMQ---LREAPTDILRLQQLRILDLSQNSLQSIPEG----- 355
            P       L  L+ LYL R     L   P ++  + QL+ LD+S N+++ IP       
Sbjct: 613 FP--VELCQLQTLEALYLSRTHGRMLTRLPEELTSMTQLKTLDISNNAIKEIPRNIGELR 670

Query: 356 ------------------FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
                             F +L  L  LDL  NN++ALP  +  L  SL+ +  D NPL
Sbjct: 671 YLVSLHAYNNQISSLPPSFLSLKVLQHLDLRGNNLTALPSAIYSL-MSLKEINFDDNPL 728



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 177/400 (44%), Gaps = 27/400 (6%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N +  +P  I  L  L +L + +N+++ +   IS   ++       N ++ +P E+  
Sbjct: 399 SDNSIEELPRKIHRLKNLKQLHVSRNKMIKMAEEISHLSNIISLEFSGNQITHIPIEIKN 458

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
             K+  ++L+ N +  + V  C L  L  L  + N +S +P ++     L  L L  N L
Sbjct: 459 CRKITRVELNYNNIMYFPVGLCALPSLDYLSFNGNYISEIPMDVSFSKQLLHLELNTNKL 518

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
             L   L +      L+YL     +   ++  T    + TM     V+ + L + G    
Sbjct: 519 PVLSEHLCSLTN---LEYL-----DVGQNQIKTIPSCISTM-----VSLRVLIVSGNKFE 565

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSS 267
             P E+     +  LD+S N +Q+LP +++    +Q L LS N+   +P  +  L +L +
Sbjct: 566 TFPKELCALHNLQVLDISENQLQKLPSDITKLKGIQKLNLSSNRFSYFPVELCQLQTLEA 625

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L   +     L ++P +    +  L+ LD+S N I  +P N     L +L  L+    Q+
Sbjct: 626 LYLSRTHGRMLTRLPEE-LTSMTQLKTLDISNNAIKEIPRN--IGELRYLVSLHAYNNQI 682

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE------LG 380
              P   L L+ L+ LDL  N+L ++P    +L SL E++  DN +   P E      L 
Sbjct: 683 SSLPPSFLSLKVLQHLDLRGNNLTALPSAIYSLMSLKEINFDDNPLLRPPVEVCKGKQLH 742

Query: 381 LLEPSLQ-ALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
            +   LQ A   D   L  I   + +  T+   ++LK K+
Sbjct: 743 TIACYLQRADERDEKILEKIFNIVANTITEINFEFLKQKL 782



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 126/269 (46%), Gaps = 18/269 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++  NKL VLS +L  S T L  L   +N +  +P  I ++  L  L +  N+  + P 
Sbjct: 511 LELNTNKLPVLSEHL-CSLTNLEYLDVGQNQIKTIPSCISTMVSLRVLIVSGNKFETFPK 569

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +    +L    +  N L  LP+++ KL  +  L+L SN+   + VE CQL+ L  L LS
Sbjct: 570 ELCALHNLQVLDISENQLQKLPSDITKLKGIQKLNLSSNRFSYFPVELCQLQTLEALYLS 629

Query: 123 NNS---LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
                 L+ LP E+  MT L+ L ++ N ++ +  ++        L+YL S    N  ++
Sbjct: 630 RTHGRMLTRLPEELTSMTQLKTLDISNNAIKEIPRNI------GELRYLVSLHAYN--NQ 681

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            S+     +++        + L L G NL+A+PS I+    + +++   N +   P E+ 
Sbjct: 682 ISSLPPSFLSLKVL-----QHLDLRGNNLTALPSAIYSLMSLKEINFDDNPLLRPPVEVC 736

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSL 268
               L T+     +  +  + IL  + ++
Sbjct: 737 KGKQLHTIACYLQRADERDEKILEKIFNI 765



 Score = 41.6 bits (96), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 8/152 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N +  +  N I     L  L A  N ++ +P +  SL  L  LDL  N + +
Sbjct: 649 LKTLDISNNAIKEIPRN-IGELRYLVSLHAYNNQISSLPPSFLSLKVLQHLDLRGNNLTA 707

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +PS+I    SL E    +N L   P E+ K  +L T+  +  +  E   +  +    + +
Sbjct: 708 LPSAIYSLMSLKEINFDDNPLLRPPVEVCKGKQLHTIACYLQRADERDEKILE---KIFN 764

Query: 121 LSNNSLSGLPPEIGK----MTTLRKLLLTGNP 148
           +  N+++ +  E  K    MTT    +L  NP
Sbjct: 765 IVANTITEINFEFLKQKLNMTTSENSILVRNP 796


>gi|14582259|gb|AAK69431.1| densin-180-like protein [Homo sapiens]
          Length = 1412

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|358679323|ref|NP_001240630.1| protein LAP2 isoform 9 [Homo sapiens]
          Length = 1367

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|332821306|ref|XP_003310748.1| PREDICTED: protein LAP2 [Pan troglodytes]
 gi|397514433|ref|XP_003827492.1| PREDICTED: protein LAP2 isoform 5 [Pan paniscus]
          Length = 1346

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|327263159|ref|XP_003216388.1| PREDICTED: protein LAP2-like isoform 2 [Anolis carolinensis]
          Length = 1295

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 183/400 (45%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  +     +  LD+S+N+I+ L   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTLIPGFMGSLKHLIYLDVSKNNIETLEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C SLQ L+LS N ++  P++I   L  L+ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 GCESLQDLLLSSNSLQQLPESI-GCLKKLAILKIDENQLMYLP-DSIGGLTSVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   +  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSVGQLSNIRTFAADHNFLTQLPPEIGNWKYVTVLFLHSNKLEFLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+ +P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKYLPYSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 148/311 (47%), Gaps = 30/311 (9%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N    A+++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYN-IASLPENPPFS 311
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N I +L E    S
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDGNRLTLIP--GFMGSLKHLIYLDVSKNNIETLEEG--IS 250

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
               LQ+L L    L++ P  I  L++L IL + +N L  +P+    LTS+ ELD S N 
Sbjct: 251 GCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDENQLMYLPDSIGGLTSVEELDCSFNE 310

Query: 372 ISALPPELGLL 382
           I ALP  +G L
Sbjct: 311 IEALPSSVGQL 321



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 40/257 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T +   ++   + L E     N L  +P  +GSL  LI LD+ +N I +
Sbjct: 186 LERLDLGSNEFTEVPE-VLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSKNNIET 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-- 118
           +   ISGC SL +  + +N+L  LP  +G L KL  L +  NQL  Y  ++     SV  
Sbjct: 245 LEEGISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDENQLM-YLPDSIGGLTSVEE 303

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LD S N +  LP  +G+++ +R      N L  L   + N       KY           
Sbjct: 304 LDCSFNEIEALPSSVGQLSNIRTFAADHNFLTQLPPEIGN------WKY----------- 346

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                    +T+          L L    L  +P E+ +  ++  ++LS N ++ LP   
Sbjct: 347 ---------VTV----------LFLHSNKLEFLPEEMGDMQKLKVINLSDNRLKYLPYSF 387

Query: 239 SSCASLQTLILSRNKIK 255
           +    L  + LS N+ K
Sbjct: 388 TKLQQLTAMWLSDNQSK 404


>gi|426384526|ref|XP_004058813.1| PREDICTED: protein LAP2 isoform 2 [Gorilla gorilla gorilla]
          Length = 1419

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|114599985|ref|XP_001162761.1| PREDICTED: protein LAP2 isoform 3 [Pan troglodytes]
 gi|397514427|ref|XP_003827489.1| PREDICTED: protein LAP2 isoform 2 [Pan paniscus]
          Length = 1412

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|386766575|ref|NP_733155.2| scribbled, isoform P [Drosophila melanogaster]
 gi|383292969|gb|AAN14077.2| scribbled, isoform P [Drosophila melanogaster]
          Length = 1729

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 155/360 (43%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
                                          N ++ELP E+S   SL  L L++N ++  
Sbjct: 230 ------------------------------ENRLEELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|402871711|ref|XP_003899797.1| PREDICTED: protein LAP2 isoform 4 [Papio anubis]
          Length = 1345

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388


>gi|402871707|ref|XP_003899795.1| PREDICTED: protein LAP2 isoform 2 [Papio anubis]
          Length = 1418

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 189/401 (47%), Gaps = 64/401 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG------------- 128
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S              
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 129 ----------LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
                     LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +
Sbjct: 143 LYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFT 197

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E     E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +
Sbjct: 198 EVPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGI 249

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S
Sbjct: 250 SACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCS 307

Query: 299 YN-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRL 336
           +N + +LP +                     P   S  ++  L+L   +L   P ++  +
Sbjct: 308 FNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDM 367

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 368 QKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NIRTFAADHNYLQQL 337


>gi|402871709|ref|XP_003899796.1| PREDICTED: protein LAP2 isoform 3 [Papio anubis]
          Length = 1301

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 186/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NIRTFAADHNYLQQL 337


>gi|397514429|ref|XP_003827490.1| PREDICTED: protein LAP2 isoform 3 [Pan paniscus]
 gi|410039319|ref|XP_003950596.1| PREDICTED: protein LAP2 [Pan troglodytes]
          Length = 1419

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|114599987|ref|XP_001162804.1| PREDICTED: protein LAP2 isoform 4 [Pan troglodytes]
 gi|397514425|ref|XP_003827488.1| PREDICTED: protein LAP2 isoform 1 [Pan paniscus]
 gi|410217134|gb|JAA05786.1| erbb2 interacting protein [Pan troglodytes]
 gi|410217138|gb|JAA05788.1| erbb2 interacting protein [Pan troglodytes]
 gi|410260628|gb|JAA18280.1| erbb2 interacting protein [Pan troglodytes]
 gi|410300756|gb|JAA28978.1| erbb2 interacting protein [Pan troglodytes]
 gi|410354909|gb|JAA44058.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1371

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|224286675|gb|ACN41041.1| unknown [Picea sitchensis]
          Length = 946

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 130/385 (33%), Positives = 181/385 (47%), Gaps = 36/385 (9%)

Query: 29  IASKNLLNGMPETIGSLSRLIRLDLHQNRILS--IPSSISGCCSLAEFYMGNNALSA-LP 85
           +A+ NL   +P   G L  L  LDL  N  LS  IP+S+  C SL+   + NN+LS  +P
Sbjct: 185 LANINLTGTIPTEFGRLVELEHLDLSSNYYLSGSIPTSLGNCTSLSHLDLSNNSLSGHIP 244

Query: 86  AELGKLSKLGTLDLHSNQLKEY---CVEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRK 141
             LG    L  L L  N L  +    +  C   LS LDLS NSLSG +PP +GK  +L  
Sbjct: 245 PTLGNCISLSHLHLSENSLSGHIPPTLGNCT-SLSHLDLSGNSLSGHIPPTLGKCISLSY 303

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLR--SRLPENEDSEASTTKEDLITMATRLSVTSK 199
           + L+GN L         G  P  L  L   S +  + ++ +     DL ++        +
Sbjct: 304 IYLSGNSLS--------GHMPRTLGNLTQISHINLSFNNLSGVIPVDLGSLQKL-----E 350

Query: 200 ELSLEGMNLS-AIPSEIWEAGEITKLDLSRNSIQEL-PPELSSCASLQTLILSRNKIKDW 257
            L L   NLS AIP ++    ++  LDLS N++  + PP L +C+SLQ L LS N++   
Sbjct: 351 WLGLSDNNLSGAIPVDLGSLQKLQILDLSDNALDNIIPPSLGNCSSLQDLSLSSNRLSGS 410

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS--LPE---NPPFSS 312
               L +LSSL  L L +N L         ++  +Q L++S N  S  LP    N P S 
Sbjct: 411 IPHHLGNLSSLQTLFLSSNRLSGSIPHHLGNLRNIQTLEISNNNISGLLPSSIFNLPLSY 470

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN- 371
                +     +           +  +  LD + N   SIPEG KNLT LT L  +DN  
Sbjct: 471 F----DFSFNTLSGISGSISKANMSHVESLDFTTNMFTSIPEGIKNLTKLTYLSFTDNYL 526

Query: 372 ISALPPELGLLEPSLQALRLDGNPL 396
           I  +P  +G L  SL+ L LD N L
Sbjct: 527 IRTIPNFIGNLH-SLEYLLLDSNNL 550



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 142/349 (40%), Gaps = 66/349 (18%)

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL---RLSVLDLSNNSLSG-LPPEI 133
           NN    +P E G+L  L TLDL  N++    V    L    L  + L+N +L+G +P E 
Sbjct: 139 NNLTGGIPPEFGRLKALRTLDLTFNEMLGGSVPKSLLNCTHLKWIGLANINLTGTIPTEF 198

Query: 134 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 193
           G++  L  L L+ N                   YL   +P +  +  S +  DL      
Sbjct: 199 GRLVELEHLDLSSN------------------YYLSGSIPTSLGNCTSLSHLDL------ 234

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRN 252
                   SL G     IP  +     ++ L LS NS+   +PP L +C SL  L LS N
Sbjct: 235 -----SNNSLSG----HIPPTLGNCISLSHLHLSENSLSGHIPPTLGNCTSLSHLDLSGN 285

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSS 312
            +       L    SLS + L  N L         ++  +  ++LS+N  S        S
Sbjct: 286 SLSGHIPPTLGKCISLSYIYLSGNSLSGHMPRTLGNLTQISHINLSFNNLSGVIPVDLGS 345

Query: 313 LPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ--------------------- 350
           L  L+ L L    L  A P D+  LQ+L+ILDLS N+L                      
Sbjct: 346 LQKLEWLGLSDNNLSGAIPVDLGSLQKLQILDLSDNALDNIIPPSLGNCSSLQDLSLSSN 405

Query: 351 ----SIPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGN 394
               SIP    NL+SL  L LS N +S  +P  LG L  ++Q L +  N
Sbjct: 406 RLSGSIPHHLGNLSSLQTLFLSSNRLSGSIPHHLGNLR-NIQTLEISNN 453



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 190/405 (46%), Gaps = 34/405 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 59
           +S LD+  N L+      + +   L+ L  S+N L+G +P T+G+ + L  LDL  N + 
Sbjct: 229 LSHLDLSNNSLSGHIPPTLGNCISLSHLHLSENSLSGHIPPTLGNCTSLSHLDLSGNSLS 288

Query: 60  S-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYC-VEACQL-R 115
             IP ++  C SL+  Y+  N+LS  +P  LG L+++  ++L  N L     V+   L +
Sbjct: 289 GHIPPTLGKCISLSYIYLSGNSLSGHMPRTLGNLTQISHINLSFNNLSGVIPVDLGSLQK 348

Query: 116 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPL-RTLRSSLVNGPTPALLKYLRSRLP 173
           L  L LS+N+LSG +P ++G +  L+ L L+ N L   +  SL N  +   L    +RL 
Sbjct: 349 LEWLGLSDNNLSGAIPVDLGSLQKLQILDLSDNALDNIIPPSLGNCSSLQDLSLSSNRLS 408

Query: 174 ENEDSEAS--TTKEDLITMATRLSVTS----------KELSLEGMNLSAI-PSEIWEAGE 220
            +        ++ + L   + RLS +           + L +   N+S + PS I+    
Sbjct: 409 GSIPHHLGNLSSLQTLFLSSNRLSGSIPHHLGNLRNIQTLEISNNNISGLLPSSIFNL-P 467

Query: 221 ITKLDLSRNSIQELPPELSSC--ASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNN 276
           ++  D S N++  +   +S    + +++L  + N     P+ I  LT L+ LS    DN 
Sbjct: 468 LSYFDFSFNTLSGISGSISKANMSHVESLDFTTNMFTSIPEGIKNLTKLTYLSFT--DNY 525

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN--IASLPENPPFSSLPHLQELYLRRMQLREA-PTDI 333
            +R +P +   ++  L+ L L  N     +P +   S L  L  L +    +  + P +I
Sbjct: 526 LIRTIP-NFIGNLHSLEYLLLDSNNLTGYIPHS--ISQLKKLFGLNIYNNNISGSIPNNI 582

Query: 334 LRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISALPP 377
             L  L  L LS+N+L   IP+G  N T LT      NN+    P
Sbjct: 583 SGLVSLGHLILSRNNLVGPIPKGIGNCTFLTFFSAHSNNLCGTVP 627



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 180/423 (42%), Gaps = 46/423 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 59
           +S LD+ GN L+      +     L+ +  S N L+G MP T+G+L+++  ++L  N + 
Sbjct: 277 LSHLDLSGNSLSGHIPPTLGKCISLSYIYLSGNSLSGHMPRTLGNLTQISHINLSFNNLS 336

Query: 60  S-IPSSISGCCSLAEFYMGNNALS-ALPAELGKLSKLGTLDLHSNQLKEYC---VEACQL 114
             IP  +     L    + +N LS A+P +LG L KL  LDL  N L       +  C  
Sbjct: 337 GVIPVDLGSLQKLEWLGLSDNNLSGAIPVDLGSLQKLQILDLSDNALDNIIPPSLGNCSS 396

Query: 115 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN-----------PLRTLRS-SLVNGPTP 162
              +   SN     +P  +G +++L+ L L+ N            LR +++  + N    
Sbjct: 397 LQDLSLSSNRLSGSIPHHLGNLSSLQTLFLSSNRLSGSIPHHLGNLRNIQTLEISNNNIS 456

Query: 163 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE-LSLEGMNLSAIPSEIWEAGEI 221
            LL      LP +    +  T   +    ++ +++  E L       ++IP  I    ++
Sbjct: 457 GLLPSSIFNLPLSYFDFSFNTLSGISGSISKANMSHVESLDFTTNMFTSIPEGIKNLTKL 516

Query: 222 TKLDLSRNS-IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
           T L  + N  I+ +P  + +  SL+ L+L  N +  +    ++ L  L  L + NN +  
Sbjct: 517 TYLSFTDNYLIRTIPNFIGNLHSLEYLLLDSNNLTGYIPHSISQLKKLFGLNIYNNNISG 576

Query: 281 VPSDGFKDIPMLQILDLSYN--IASLPE---NPPFSSL--PHLQEL---------YLRRM 324
              +    +  L  L LS N  +  +P+   N  F +    H   L         Y   +
Sbjct: 577 SIPNNISGLVSLGHLILSRNNLVGPIPKGIGNCTFLTFFSAHSNNLCGTVPASLAYCTNL 636

Query: 325 QL---------REAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISA 374
           +L          E P  +  L QL +L +  N+L   IP+G  NLT L  LDLS+N +S 
Sbjct: 637 KLIDLSSNNFTGELPESLSFLNQLSVLSVGYNNLHGGIPKGITNLTMLHVLDLSNNKLSG 696

Query: 375 LPP 377
             P
Sbjct: 697 KIP 699



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 160/412 (38%), Gaps = 93/412 (22%)

Query: 25  LTELIASKNLLNGMPETI--GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL- 81
           L+    S N L+G+  +I   ++S +  LD   N   SIP  I     L      +N L 
Sbjct: 468 LSYFDFSFNTLSGISGSISKANMSHVESLDFTTNMFTSIPEGIKNLTKLTYLSFTDNYLI 527

Query: 82  SALPAELGKLSKLGTLDLHSNQLKEYCVEAC-QLR-LSVLDLSNNSLSG-LPPEIGKMTT 138
             +P  +G L  L  L L SN L  Y   +  QL+ L  L++ NN++SG +P  I  + +
Sbjct: 528 RTIPNFIGNLHSLEYLLLDSNNLTGYIPHSISQLKKLFGLNIYNNNISGSIPNNISGLVS 587

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L  L+L+       R++LV GP P  +                       T  T  S  S
Sbjct: 588 LGHLILS-------RNNLV-GPIPKGIGN--------------------CTFLTFFSAHS 619

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDW 257
             L         +P+ +     +  +DLS N+   ELP  LS    L  L +  N +   
Sbjct: 620 NNLC------GTVPASLAYCTNLKLIDLSSNNFTGELPESLSFLNQLSVLSVGYNNLHGG 673

Query: 258 PDAILTSLSSLSCLKLDNNPLR-QVPSD-----GFK------DIPMLQ------------ 293
               +T+L+ L  L L NN L  ++PSD     GF        I ML             
Sbjct: 674 IPKGITNLTMLHVLDLSNNKLSGKIPSDLQKLQGFAINVSATHIYMLYEGRLGKIVLLPS 733

Query: 294 -------ILDLSYNIASLPENPPFSSLPHLQELYLRR-------------------MQLR 327
                   +D+  ++ SLP   P +++ +L    L                      QL 
Sbjct: 734 NSIIEEMTIDIKRHMYSLPYMSPTNTIFYLSNNNLTGEIPASIGCLRSLRLLNLSGNQLE 793

Query: 328 EA-PTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISALPP 377
              P  +  +  L  LDLS+N L+  IPEG   L  L  LD+S N++    P
Sbjct: 794 GVIPASLGNISTLEELDLSKNHLKGEIPEGLSKLHELAVLDVSSNHLCGPIP 845


>gi|410354913|gb|JAA44060.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1367

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|405965662|gb|EKC31024.1| Protein lap4 [Crassostrea gigas]
          Length = 1780

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 196/409 (47%), Gaps = 28/409 (6%)

Query: 11  LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 70
           LT + ++++     L EL+   N L  +P+    L +L +L L  N I  +P  ++   +
Sbjct: 25  LTDVPDDVLRYTRSLEELLLDANQLKDLPKGFFRLVQLRKLSLSDNEIARLPPEVANLVN 84

Query: 71  LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 129
           L E  +  N +  +P  +  L  L  LD+ SN L +      QLR L+ L L++ SL  L
Sbjct: 85  LMEMDISRNDIGDIPENIKFLKNLQVLDISSNPLTKLPEGFTQLRNLTHLGLNDISLMRL 144

Query: 130 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE--DL 187
           PP+IG +T L  L L  N ++ L  S+      +LL  L     E  D  ++  KE  ++
Sbjct: 145 PPDIGSLTNLVSLELRENMIQFLPQSM------SLLVKL-----EILDLGSNNIKELPEI 193

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           I     L    +EL L+   L  +P EI    ++T++D+S N +  +P E+    +L  L
Sbjct: 194 IGSLPSL----QELWLDCNELQDLPPEIGNLRKLTQIDVSENQLTYIPDEICGLQNLTDL 249

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            LS+N ++D P+ I  SL  LS LKLD N L  +P +   +   L  L L+ N +  LP 
Sbjct: 250 CLSQNDLEDIPEGI-GSLKKLSILKLDQNKLGFLPQE-IGNCESLTELILTENYLEELPS 307

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L  L  L + R QL+E P +I +  +L ++ L  N L  +P+   NL  L  LD
Sbjct: 308 T--IGRLRLLSNLNVDRNQLKEIPVEIGQCVRLNVVSLRDNRLLRLPQELGNLKELHVLD 365

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGN---PLRSIRRTILDRGTKAVL 412
           +S N +  LP  + +    L AL L  N   P+   +    DR  + VL
Sbjct: 366 VSGNKLEYLP--ITITNLHLNALWLSENQAKPMLKFQTDFDDRTGQHVL 412



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 92/159 (57%), Gaps = 2/159 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++++DV  N+LT + +  I     LT+L  S+N L  +PE IGSL +L  L L QN++  
Sbjct: 223 LTQIDVSENQLTYIPDE-ICGLQNLTDLCLSQNDLEDIPEGIGSLKKLSILKLDQNKLGF 281

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVL 119
           +P  I  C SL E  +  N L  LP+ +G+L  L  L++  NQLKE  VE  Q +RL+V+
Sbjct: 282 LPQEIGNCESLTELILTENYLEELPSTIGRLRLLSNLNVDRNQLKEIPVEIGQCVRLNVV 341

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
            L +N L  LP E+G +  L  L ++GN L  L  ++ N
Sbjct: 342 SLRDNRLLRLPQELGNLKELHVLDVSGNKLEYLPITITN 380



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 135/298 (45%), Gaps = 40/298 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N LT L          LT L  +   L  +P  IGSL+ L+ L+L +N I  +P 
Sbjct: 111 LDISSNPLTKLPEGF-TQLRNLTHLGLNDISLMRLPPDIGSLTNLVSLELRENMIQFLPQ 169

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           S+S    L    +G+N +  LP  +G L  L  L L  N+L++   E   LR L+ +D+S
Sbjct: 170 SMSLLVKLEILDLGSNNIKELPEIIGSLPSLQELWLDCNELQDLPPEIGNLRKLTQIDVS 229

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L+ +P EI  +  L  L L+ N L                      +PE        
Sbjct: 230 ENQLTYIPDEICGLQNLTDLCLSQNDLED--------------------IPEG------- 262

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                I    +LS+    L L+   L  +P EI     +T+L L+ N ++ELP  +    
Sbjct: 263 -----IGSLKKLSI----LKLDQNKLGFLPQEIGNCESLTELILTENYLEELPSTIGRLR 313

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
            L  L + RN++K+ P  I   +  L+ + L +N L ++P +   ++  L +LD+S N
Sbjct: 314 LLSNLNVDRNQLKEIPVEIGQCV-RLNVVSLRDNRLLRLPQE-LGNLKELHVLDVSGN 369



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 1/124 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S L ++ NKL  L    I +   LTELI ++N L  +P TIG L  L  L++ +N++  
Sbjct: 269 LSILKLDQNKLGFLPQE-IGNCESLTELILTENYLEELPSTIGRLRLLSNLNVDRNQLKE 327

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IP  I  C  L    + +N L  LP ELG L +L  LD+  N+L+   +    L L+ L 
Sbjct: 328 IPVEIGQCVRLNVVSLRDNRLLRLPQELGNLKELHVLDVSGNKLEYLPITITNLHLNALW 387

Query: 121 LSNN 124
           LS N
Sbjct: 388 LSEN 391


>gi|291395454|ref|XP_002714052.1| PREDICTED: ERBB2 interacting protein [Oryctolagus cuniculus]
          Length = 1399

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 190/401 (47%), Gaps = 64/401 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG------------- 128
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S              
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 129 ----------LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
                     LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +
Sbjct: 143 LYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFT 197

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E     E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +
Sbjct: 198 EVPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGI 249

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S
Sbjct: 250 SACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLISIEELDCS 307

Query: 299 YN-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRL 336
           +N + +LP +                     P   +  ++  L+L   +L   P ++  +
Sbjct: 308 FNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLELLPEEMGDM 367

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 368 QKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISIEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGNWKNVTVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLISIEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NIRTFAADHNYLQQL 337


>gi|187954433|gb|AAI41179.1| Erbb2ip protein [Mus musculus]
          Length = 1294

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        +E  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------REFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ  +LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDFLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLRSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   +  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L + + S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L  N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 117/250 (46%), Gaps = 24/250 (9%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 312
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRL 219

Query: 373 SALPPELGLL 382
           + +P  +G L
Sbjct: 220 TFIPGFIGSL 229



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 151/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLREFWMDGNRLTFIP--GFIGSLRQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+  L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N I
Sbjct: 252 CENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEI 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NMRTFAADHNYLQQL 337


>gi|428210576|ref|YP_007083720.1| Leucine Rich Repeat (LRR)-containing protein [Oscillatoria
           acuminata PCC 6304]
 gi|427998957|gb|AFY79800.1| Leucine Rich Repeat (LRR)-containing protein [Oscillatoria
           acuminata PCC 6304]
          Length = 298

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 147/341 (43%), Gaps = 76/341 (22%)

Query: 93  KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
           ++ +L+L    L     E  QL +L+ LDL NN LS LP EIG+++ L +L L  N L+ 
Sbjct: 17  QVTSLNLSGKGLTTLASEIRQLTKLTRLDLYNNQLSALPSEIGQLSHLTRLNLGDNQLKV 76

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
           L                    PE             I   + L+    EL L G  L  +
Sbjct: 77  LP-------------------PE-------------IWQLSNLT----ELDLWGNQLKVL 100

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P EIW+   +T+LDL  N +  LP E+    +L+   L  N++   P  I   LS+L+ L
Sbjct: 101 PPEIWQLSNLTELDLQDNQLSALPSEIWQLFNLKEFNLVGNQLSVLPPEI-GQLSNLTKL 159

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 331
            L NN L  +P                         P    L +L +LYL+  QL   P 
Sbjct: 160 YLQNNQLTVLP-------------------------PEIGQLSNLTKLYLQDNQLTVLPP 194

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL--------- 382
           +I  L  L  L L  N L  +P    NLT L EL+L  N +SALPPE+G L         
Sbjct: 195 EIGELSNLTELYLQNNQLSVLPPEIGNLTHLIELNLVGNELSALPPEIGHLRMLAAIILE 254

Query: 383 ----EPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
               E     L L GNPL S    IL +G  A L YL++++
Sbjct: 255 ENPEEWWYDGLYLGGNPLTSPPPEILKQGIDATLAYLREQL 295



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 134/290 (46%), Gaps = 27/290 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L++ G  LT L++  I   T LT L    N L+ +P  IG LS L RL+L  N++  
Sbjct: 18  VTSLNLSGKGLTTLASE-IRQLTKLTRLDLYNNQLSALPSEIGQLSHLTRLNLGDNQLKV 76

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I    +L E  +  N L  LP E+ +LS L  LDL  NQL     E  QL  L   
Sbjct: 77  LPPEIWQLSNLTELDLWGNQLKVLPPEIWQLSNLTELDLQDNQLSALPSEIWQLFNLKEF 136

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSRLPENEDS 178
           +L  N LS LPPEIG+++ L KL L  N L  L   +  G    L K YL+       D+
Sbjct: 137 NLVGNQLSVLPPEIGQLSNLTKLYLQNNQLTVLPPEI--GQLSNLTKLYLQ-------DN 187

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           + +    ++  ++        EL L+   LS +P EI     + +L+L  N +  LPPE+
Sbjct: 188 QLTVLPPEIGELSNL-----TELYLQNNQLSVLPPEIGNLTHLIELNLVGNELSALPPEI 242

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
                L  +IL  N  + W D           L L  NPL   P +  K 
Sbjct: 243 GHLRMLAAIILEENPEEWWYDG----------LYLGGNPLTSPPPEILKQ 282



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 85/186 (45%), Gaps = 37/186 (19%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + + ++ GN+L+VL    I   + LT+L    N L  +P  IG LS L +L L  N++  
Sbjct: 133 LKEFNLVGNQLSVLPPE-IGQLSNLTKLYLQNNQLTVLPPEIGQLSNLTKLYLQDNQLTV 191

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P  I    +L E Y+ NN LS LP E+G L+ L              +E        L+
Sbjct: 192 LPPEIGELSNLTELYLQNNQLSVLPPEIGNLTHL--------------IE--------LN 229

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG------PTPALLK-------- 166
           L  N LS LPPEIG +  L  ++L  NP       L  G      P P +LK        
Sbjct: 230 LVGNELSALPPEIGHLRMLAAIILEENPEEWWYDGLYLGGNPLTSPPPEILKQGIDATLA 289

Query: 167 YLRSRL 172
           YLR +L
Sbjct: 290 YLREQL 295


>gi|418667007|ref|ZP_13228423.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
 gi|410757251|gb|EKR18865.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
          Length = 564

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 191/419 (45%), Gaps = 51/419 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+ GN+LT L    I     L EL  + N L  +P+ I  L  L  L L  NRI +
Sbjct: 138 LKSLDLGGNQLTTLPRE-INKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRIST 196

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L E  +  N L  LP E+G+L  L  L+L +N++K    E   L  L + 
Sbjct: 197 LPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIF 256

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS------------LVNGPTPALLKY 167
           +LS N L+ +P EIG +  LR L L  N L+TL               L+N       K 
Sbjct: 257 NLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKK 316

Query: 168 LRSRLP----ENEDSEASTTKEDL-ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 222
           +++ LP    +  D E   T  +L + +   L + S  LSLE    S  P EI +   + 
Sbjct: 317 IQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILS--LSLEYQEFSLFPKEILKLKNLR 374

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQ 280
            L L   S+  LP E+     L+ L L  N++K  P  I  L +L SL      NN    
Sbjct: 375 SLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGA--NNEFEV 432

Query: 281 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
           +P    K+I  LQ                     +L+ L L + + +  P +I  L++L 
Sbjct: 433 LP----KEIARLQ---------------------NLRSLLLNQNRFKIFPKEIWELKKLV 467

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           IL+++ N L ++PE    L  L  LDLS N ++ LP E+G L  +L  L L  N ++++
Sbjct: 468 ILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLH-NLTELYLQYNRIKTL 525



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 195/433 (45%), Gaps = 55/433 (12%)

Query: 11  LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 70
           LTVL    I     L  L    N L  +P  IG L  L  L L +N++ + P  I    +
Sbjct: 1   LTVLPKE-IGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLEN 59

Query: 71  LAEFYMGNNALSALPAELGKLSKLGTLDL---------HSNQLKEYCVEACQLR-LSVLD 120
           L E  +  N L  LP E+G+L KL  L+L           NQL     E  QL+ L +L 
Sbjct: 60  LQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILS 119

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT----------LRSSLVNGPTPALLKYLRS 170
           LS N L+ LP EIG++  L+ L L GN L T          L+   +NG     L  +  
Sbjct: 120 LSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNK---LTIVPK 176

Query: 171 RLPENEDSEASTTKEDLITMATRLSVTSK---ELSLEGMNLSAIPSEIWEAGEITKLDLS 227
            + E E+      K + I+   +    SK   EL+L G  L  +P EI E   + +L+L 
Sbjct: 177 EIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLE 236

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS--DG 285
            N I+ LP E+ +  +L    LS NK+   P  I  +L +L  L L+NN L+ +P   + 
Sbjct: 237 NNRIKILPNEIGALENLWIFNLSGNKLASIPKEI-GNLQNLRMLYLENNQLKTLPRQMEK 295

Query: 286 FKDIPMLQIL-----------------DLSYNIASLPENPPFSSLP-------HLQELYL 321
            +D+ +L +L                 + + ++  + E   + +L         +  L L
Sbjct: 296 LQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSLSL 355

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGL 381
              +    P +IL+L+ LR L L   SL ++P+    L  L  L L  N + +LP E+GL
Sbjct: 356 EYQEFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGL 415

Query: 382 LEPSLQALRLDGN 394
           L  +L++L +  N
Sbjct: 416 LR-NLRSLDIGAN 427



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 1/90 (1%)

Query: 310 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
              L +LQ L L+  QL   P +I +LQ L+ L LS+N L + P+    L +L ELDL+ 
Sbjct: 8   IGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNG 67

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSI 399
           N +  LP E+G L+  L+ L LDGN + ++
Sbjct: 68  NQLKTLPKEIGQLQ-KLEKLNLDGNQITTL 96



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 22  WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W +  L  L  + N L+ +PE IG L  L  LDL  NR+ ++PS I    +L E Y+  N
Sbjct: 461 WELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYN 520

Query: 80  ALSALPAELGKLSKLGTLDLHSN 102
            +  LP E+ +L  L  L L+ N
Sbjct: 521 RIKTLPEEIARLQNLRKLTLYEN 543


>gi|186686533|ref|YP_001869729.1| hypothetical protein Npun_R6524 [Nostoc punctiforme PCC 73102]
 gi|186468985|gb|ACC84786.1| leucine-rich repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1124

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 171/379 (45%), Gaps = 53/379 (13%)

Query: 49  IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 108
           I LDL +  +  IP +I+    L +  +  N ++ LP  +  L++L TLDL +N+L +  
Sbjct: 23  IELDLSKIELTEIPEAIASLTQLQQLDLSRNQVTQLPEAIASLTQLQTLDLSNNKLTQLP 82

Query: 109 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 167
                L RL  LDLSNN L+ LP  I  +  L++L L  N L                  
Sbjct: 83  EAIASLARLQRLDLSNNQLTELPEAIASLAQLQELNLRNNQL------------------ 124

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
             + LPE             I   TRL    + L L    L+ +P  I    ++   DLS
Sbjct: 125 --TELPE------------AIASLTRL----QRLDLSNNQLTELPEAIASLTQLQSFDLS 166

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            N + ELP  LS    L+      N ++  P +++  L  L  L +  N L  +PS    
Sbjct: 167 HNELTELPNSLSRLLYLEIFDCGSNLLRQVP-SVIKELKGLKELYIYANDLEVIPS-WIC 224

Query: 288 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ-------LREAPTDILRLQQL 339
           D+ +L+IL +  N I+ LP+     SL  LQ L    +        L + P  I R++Q+
Sbjct: 225 DLHVLEILSIGGNQISELPK-----SLDKLQSLEFIILGADDGGNPLSKLPPCIQRIKQI 279

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           R +  +   L  +P+       L EL L  N ++ LP  LG L P L  ++LD NPL   
Sbjct: 280 RRIWANNCELHFLPDWLNEFPQLEELYLGSNCLTDLPASLGQL-PHLDDIQLDHNPLNPD 338

Query: 400 RRTILDRGTKAVLKYLKDK 418
                ++GT+AVL+YL+ +
Sbjct: 339 LAAAYEQGTEAVLQYLRAR 357


>gi|418708871|ref|ZP_13269671.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770801|gb|EKR46014.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|456969315|gb|EMG10349.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 447

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 191/416 (45%), Gaps = 51/416 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L +E N++TVL    I     L EL  + N L  +P+ I  L  L  L L  NRI ++P 
Sbjct: 24  LKLEENRITVLPRE-INKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPK 82

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  +  N L  LP E+G+L  L  L+L +N++K    E   L  L + +LS
Sbjct: 83  EIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLS 142

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS------------LVNGPTPALLKYLRS 170
            N L+ +P EIG +  LR L L  N L+TL               L+N       K +++
Sbjct: 143 GNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLFEERKKIQA 202

Query: 171 RLPENE----DSEASTTKEDL-ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
            LP+ +    D E   T  +L + +   L + S  LSLE    S  P EI +   +  L 
Sbjct: 203 LLPDCDIDLRDVEEGETYRNLNLALEQPLKILS--LSLEYQQFSLFPKEILKLKNLRSLS 260

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPS 283
           L   S+  LP E+     L+ L L  N++K  P  I  L +L SL      NN    +P 
Sbjct: 261 LYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGA--NNEFEVLP- 317

Query: 284 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
              K+I  LQ                     +L+ L L + + +  P +I  L++L IL+
Sbjct: 318 ---KEIARLQ---------------------NLRSLLLNQNRFKIFPKEIWELKKLVILN 353

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           ++ N L ++PE    L  L  LDLS N ++ LP E+G L  +L  L L  N ++++
Sbjct: 354 VNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLH-NLTELYLQYNRIKTL 408



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 147/354 (41%), Gaps = 54/354 (15%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           +DL + +    P  I     L    +  N ++ LP E+ KL  L  L L+ N+L     E
Sbjct: 1   MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L  L++L L NN +S LP EI K   L++L L GN L TL   +        L    
Sbjct: 61  IWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLEN 120

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           +R                                    +  +P+EI     +   +LS N
Sbjct: 121 NR------------------------------------IKILPNEIGALENLWIFNLSGN 144

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  +P E+ +  +L+ L L  N++K  P   +  L  L  L L  NPL       F++ 
Sbjct: 145 KLASIPKEIGNLQNLRMLYLENNQLKTLPRQ-MEKLQDLEVLNLLINPLL------FEER 197

Query: 290 PMLQIL--DLSYNIASLPENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLR 340
             +Q L  D   ++  + E   + +L         +  L L   Q    P +IL+L+ LR
Sbjct: 198 KKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFSLFPKEILKLKNLR 257

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            L L   SL ++P+    L  L  L L  N + +LP E+GLL  +L++L +  N
Sbjct: 258 SLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLR-NLRSLDIGAN 310



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 97/197 (49%), Gaps = 6/197 (3%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           + L     +  P EIWE   +  L L  N I  LP E++   +L+ L L+ NK+   P  
Sbjct: 1   MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I   L +L+ L+L NN +  +P +  K    LQ L+L  N + +LP       L     L
Sbjct: 61  I-WELENLTILRLKNNRISTLPKEIEKS-KNLQELNLRGNRLVTLPGEIGELKLLEELNL 118

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
              R+++   P +I  L+ L I +LS N L SIP+   NL +L  L L +N +  LP ++
Sbjct: 119 ENNRIKI--LPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQM 176

Query: 380 GLLEPSLQALRLDGNPL 396
             L+  L+ L L  NPL
Sbjct: 177 EKLQ-DLEVLNLLINPL 192



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 22  WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W +  L  L  + N L+ +PE IG L  L  LDL  NR+ ++PS I    +L E Y+  N
Sbjct: 344 WELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYN 403

Query: 80  ALSALPAELGKLSKLGTLDLHSN 102
            +  LP E+ +L  L  L L+ N
Sbjct: 404 RIKTLPEEIARLQNLRKLTLYEN 426


>gi|421100175|ref|ZP_15560811.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796765|gb|EKR98888.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 406

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 164/347 (47%), Gaps = 43/347 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL    + + P  I    +L    + NN L ALP E+G+L  L  L++  N L E   E
Sbjct: 53  LDLSSKLLTTFPKGIEKFQNLKHLDLSNNQLKALPKEIGQLQNLQKLNVSVNNLIELPQE 112

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L  L+LS N L+ LP EIG++  L  L +  N L  L         P  +  L+
Sbjct: 113 IGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTIL---------PKEIGQLQ 163

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           +                            +EL L G +L+++P EI +  +  KL L  N
Sbjct: 164 NL---------------------------EELILYGNSLTSLPEEIGQLQKFEKLYLHDN 196

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP  L    +L+ + L +N++   P  I   L  L  L L +N L  +P +    +
Sbjct: 197 QLTTLPQGLCKLQNLEQIYLHQNRLTSLPKEI-GQLRKLWTLYLYSNELTTLPEE-IGQL 254

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             L+ L L  N + +LP+      L +L  L L   QL   P +I +LQ L++LDLS NS
Sbjct: 255 QNLRQLSLKLNNLTTLPK--EIGQLQNLDNLDLSDNQLTLIPKEIGQLQNLKLLDLSGNS 312

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L ++P+    L +L  LDLS N+++ LP E+G L+ +L  L + G P
Sbjct: 313 LTTLPKEIGQLQNLKLLDLSGNSLTTLPKEIGQLK-NLYFLAMKGIP 358



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 129/277 (46%), Gaps = 12/277 (4%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I  +  L  L  S N L  +P+ IG L  L +L++  N ++ +P  I    +L +  +  
Sbjct: 67  IEKFQNLKHLDLSNNQLKALPKEIGQLQNLQKLNVSVNNLIELPQEIGQLQNLEQLNLSG 126

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP E+G+L KL TL ++ N+L     E  QL+ L  L L  NSL+ LP EIG++ 
Sbjct: 127 NRLTTLPQEIGQLKKLETLHVYYNRLTILPKEIGQLQNLEELILYGNSLTSLPEEIGQLQ 186

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK--------EDLIT 189
              KL L  N L TL   L        +   ++RL           K         +L T
Sbjct: 187 KFEKLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSLPKEIGQLRKLWTLYLYSNELTT 246

Query: 190 MATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +   +      ++LSL+  NL+ +P EI +   +  LDLS N +  +P E+    +L+ L
Sbjct: 247 LPEEIGQLQNLRQLSLKLNNLTTLPKEIGQLQNLDNLDLSDNQLTLIPKEIGQLQNLKLL 306

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
            LS N +   P  I   L +L  L L  N L  +P +
Sbjct: 307 DLSGNSLTTLPKEI-GQLQNLKLLDLSGNSLTTLPKE 342



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 123/263 (46%), Gaps = 43/263 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L V  N+LT+L    I     L ELI   N L  +PE IG L +  +L LH N++ +
Sbjct: 142 LETLHVYYNRLTILPKE-IGQLQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTT 200

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  +    +L + Y+  N L++LP E+G+L KL TL L+SN+L     E  QL+ L  L
Sbjct: 201 LPQGLCKLQNLEQIYLHQNRLTSLPKEIGQLRKLWTLYLYSNELTTLPEEIGQLQNLRQL 260

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N+L+ LP EIG++  L  L L+ N L  +         P  +  L++         
Sbjct: 261 SLKLNNLTTLPKEIGQLQNLDNLDLSDNQLTLI---------PKEIGQLQNL-------- 303

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                              K L L G +L+ +P EI +   +  LDLS NS+  LP E+ 
Sbjct: 304 -------------------KLLDLSGNSLTTLPKEIGQLQNLKLLDLSGNSLTTLPKEIG 344

Query: 240 SCASLQTLILSRNKIKDWPDAIL 262
              +L  L      +K  PD IL
Sbjct: 345 QLKNLYFL-----AMKGIPDLIL 362



 Score = 41.6 bits (96), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           +LDLS   L + P+G +   +L  LDLS+N + ALP E+G L+ +LQ L +  N L
Sbjct: 52  VLDLSSKLLTTFPKGIEKFQNLKHLDLSNNQLKALPKEIGQLQ-NLQKLNVSVNNL 106


>gi|426246387|ref|XP_004016976.1| PREDICTED: protein LAP2 [Ovis aries]
          Length = 1371

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 189/401 (47%), Gaps = 64/401 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+A
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTA 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG------------- 128
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S              
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 129 ----------LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
                     LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +
Sbjct: 143 LYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFT 197

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E     E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +
Sbjct: 198 EVPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGI 249

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           S C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S
Sbjct: 250 SGCENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLVSIEELDCS 307

Query: 299 YN-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRL 336
            N + +LP +                     P   +  ++  L+L   +L   P ++  +
Sbjct: 308 INELEALPSSIGQLTNVRTFAADHNYLQQLPPEIGNWKNITVLFLHSNKLETLPEEMGDM 367

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 368 QKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LD+  N + ++    I+    L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDISKNNIEMVEEG-ISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N L ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLVSIEELDCSINELEALPSSIGQLTNVRTFAADHNYLQQLPPEIGNWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 24/251 (9%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 312
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRL 219

Query: 373 SALPPELGLLE 383
           + +P  +G L+
Sbjct: 220 TFIPGFIGSLK 230



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 40/257 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T +   ++   + L E     N L  +P  IGSL +L  LD+ +N I  
Sbjct: 186 LERLDLGSNEFTEVPE-VLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEM 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-- 118
           +   ISGC +L +  + +N+L  LP  +G L  + TL +  NQL  Y  ++    +S+  
Sbjct: 245 VEEGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLM-YLPDSIGGLVSIEE 303

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LD S N L  LP  IG++T +R      N                   YL+   PE    
Sbjct: 304 LDCSINELEALPSSIGQLTNVRTFAADHN-------------------YLQQLPPE---- 340

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                    I     ++V    L L    L  +P E+ +  ++  ++LS N ++ LP   
Sbjct: 341 ---------IGNWKNITV----LFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 239 SSCASLQTLILSRNKIK 255
           +    L  + LS N+ K
Sbjct: 388 TKLQQLTAMWLSDNQSK 404


>gi|169260661|gb|ACA52057.1| densin 11-N6 [Rattus norvegicus]
          Length = 533

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 181/392 (46%), Gaps = 66/392 (16%)

Query: 35  LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 93
           L  +P+ + +  R L  L L  N+I  +P  +  C +L +  + +N LS+LP  +  L  
Sbjct: 39  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVN 98

Query: 94  LGTLDLHSNQLKEY--CVEACQ----------------------LRLSVLDLSNNSLSGL 129
           L  LD+  N ++E+   ++ C+                      L L+ L L++  L  L
Sbjct: 99  LKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFL 158

Query: 130 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 189
           P   G++  LR L L  N L+TL  S+       L +  R  L  NE SE     + +  
Sbjct: 159 PANFGRLVKLRILELRENHLKTLPKSM-----HKLAQLERLDLGNNEFSELPEVLDQIQN 213

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
           +        +EL ++   L  +P  I +   +  LD+S+N I+ +  ++S C +L+ L+L
Sbjct: 214 L--------RELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLL 265

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 308
           S N ++  PD+I   L  L+ LK+D+N L  +P +   ++ +L+  D S N + SLP  P
Sbjct: 266 SSNMLQQLPDSI-GLLKKLTTLKVDDNQLTMLP-NTIGNLSLLEEFDCSCNELESLP--P 321

Query: 309 PFSSLPHLQELY-----------------------LRRMQLREAPTDILRLQQLRILDLS 345
               L  L+ L                        LR  +L   P +I ++Q+LR+L+LS
Sbjct: 322 TIGYLHSLRTLAVDENFLPELPREIGSCKNVTVTSLRSNKLEFLPEEIGQMQRLRVLNLS 381

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            N L+++P  F  L  L  L LSDN   AL P
Sbjct: 382 DNRLKNLPFSFTKLKELAALWLSDNQSKALIP 413



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 115/217 (52%), Gaps = 10/217 (4%)

Query: 201 LSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           L     +L  +P E++     + +L L  N I+ELP +L +C +L+ L +  N +   P 
Sbjct: 32  LDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPT 91

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 318
           +I  SL +L  L +  N +++ P +  K    L I++ S N I+ LP+   F+ L +L +
Sbjct: 92  SI-ASLVNLKELDISKNGVQEFP-ENIKCCKCLTIIEASVNPISKLPDG--FTQLLNLTQ 147

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           LYL    L   P +  RL +LRIL+L +N L+++P+    L  L  LDL +N  S LP  
Sbjct: 148 LYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEV 207

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           L  ++ +L+ L +D N L+ +  +I   G   +L YL
Sbjct: 208 LDQIQ-NLRELWMDNNALQVLPGSI---GKLKMLVYL 240



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 144/319 (45%), Gaps = 62/319 (19%)

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N    AL  
Sbjct: 21  CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN--CQAL-- 76

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                                           ++LS+   +LS++P+ I     + +LD+
Sbjct: 77  --------------------------------RKLSIPDNDLSSLPTSIASLVNLKELDI 104

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S+N +QE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 105 SKNGVQEFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 162

Query: 287 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLP-------HLQELYLRRM 324
             +  L+IL+L  N + +LP+              N  FS LP       +L+EL++   
Sbjct: 163 GRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNN 222

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
            L+  P  I +L+ L  LD+S+N ++++        +L +L LS N +  LP  +GLL+ 
Sbjct: 223 ALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLK- 281

Query: 385 SLQALRLDGNPLRSIRRTI 403
            L  L++D N L  +  TI
Sbjct: 282 KLTTLKVDDNQLTMLPNTI 300



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 111/256 (43%), Gaps = 38/256 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI +
Sbjct: 191 LERLDLGNNEFSELPE-VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIET 249

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +   ISGC +L +  + +N L  LP  +G L KL TL +  NQL         L  L   
Sbjct: 250 VDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEF 309

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D S N L  LPP IG + +LR L +  N L            P L + + S         
Sbjct: 310 DCSCNELESLPPTIGYLHSLRTLAVDENFL------------PELPREIGS--------- 348

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                         ++VT    SL    L  +P EI +   +  L+LS N ++ LP   +
Sbjct: 349 -----------CKNVTVT----SLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFT 393

Query: 240 SCASLQTLILSRNKIK 255
               L  L LS N+ K
Sbjct: 394 KLKELAALWLSDNQSK 409



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 119/247 (48%), Gaps = 17/247 (6%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           +N L  +P+++  L++L RLDL  N    +P  +    +L E +M NNAL  LP  +GKL
Sbjct: 175 ENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKL 234

Query: 92  SKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
             L  LD+  N+++  +  +  C+  L  L LS+N L  LP  IG +  L  L +  N L
Sbjct: 235 KMLVYLDMSKNRIETVDMDISGCE-ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQL 293

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
             L +++ N      L  L       E+ + S  + + +        + + L+++   L 
Sbjct: 294 TMLPNTIGN------LSLL-------EEFDCSCNELESLPPTIGYLHSLRTLAVDENFLP 340

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P EI     +T   L  N ++ LP E+     L+ L LS N++K+ P +  T L  L+
Sbjct: 341 ELPREIGSCKNVTVTSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFS-FTKLKELA 399

Query: 270 CLKLDNN 276
            L L +N
Sbjct: 400 ALWLSDN 406


>gi|358679318|ref|NP_001240628.1| protein LAP2 isoform 8 [Homo sapiens]
          Length = 1419

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|427798975|gb|JAA64939.1| hypothetical protein, partial [Rhipicephalus pulchellus]
          Length = 1144

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 181/401 (45%), Gaps = 41/401 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +D   + L  + ++++     L EL+   N +  +P  +  L++L RL ++ N I  +P+
Sbjct: 18  IDKRHSNLFNIPDDVLRYARTLEELLLDANHIRDLPRGLFRLTKLRRLSVNDNEISQLPA 77

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I+   +L +  +  N +  +P  +  L  L + D  SN L +      QLR L+VL L+
Sbjct: 78  DIANLMNLVDLDVSKNDIQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLN 137

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           + SL+ LP + G ++ L  L L  N L+ L  S        L+K  R  L  N+      
Sbjct: 138 DVSLTQLPHDFGSLSNLVSLELRENYLKGLPLSFA-----FLVKLERLDLGSND------ 186

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
             E+L  +  +LS + +EL L+   LS +P EI +   +  LD+S N +  LP EL    
Sbjct: 187 -FEELPVVVGQLS-SLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLSHLPDELCDLE 244

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           SL  L  S+N ++  P+ I   L  L+  K+D N                        + 
Sbjct: 245 SLTDLHFSQNYLESLPEDI-GRLRKLTIFKVDQN-----------------------RLG 280

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
           SLPE+        LQEL L    L E P  I RL  L  L+   N L  +P     L  L
Sbjct: 281 SLPES--IGDCVSLQELILTDNLLTELPASIGRLVNLNNLNADCNQLSELPPEIGQLVRL 338

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             L L +N +  LPPE G L   L  L + GN L+++  T+
Sbjct: 339 GVLSLRENCLQRLPPETGTLR-RLHVLDVSGNRLQNLPLTV 378



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 161/358 (44%), Gaps = 49/358 (13%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L V  N+++ L  + IA+   L +L  SKN +  +PE I  L  L   D   N +  
Sbjct: 62  LRRLSVNDNEISQLPAD-IANLMNLVDLDVSKNDIQEIPENIKYLKSLQSADFSSNPLSK 120

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVL 119
           +P+      SL    + + +L+ LP + G LS L +L+L  N LK   +  A  ++L  L
Sbjct: 121 LPAGFVQLRSLTVLGLNDVSLTQLPHDFGSLSNLVSLELRENYLKGLPLSFAFLVKLERL 180

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPEN 175
           DL +N    LP  +G++++L++L L  N L TL         P  +  LR      + EN
Sbjct: 181 DLGSNDFEELPVVVGQLSSLQELWLDSNELSTL---------PKEIGQLRRLMCLDVSEN 231

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
           + S       DL ++         +L      L ++P +I    ++T   + +N +  LP
Sbjct: 232 KLSHLPDELCDLESLT--------DLHFSQNYLESLPEDIGRLRKLTIFKVDQNRLGSLP 283

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
             +  C SLQ LIL+ N + + P A +  L +L+ L  D N L ++P             
Sbjct: 284 ESIGDCVSLQELILTDNLLTELP-ASIGRLVNLNNLNADCNQLSELP------------- 329

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
                       P    L  L  L LR   L+  P +   L++L +LD+S N LQ++P
Sbjct: 330 ------------PEIGQLVRLGVLSLRENCLQRLPPETGTLRRLHVLDVSGNRLQNLP 375



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 142/318 (44%), Gaps = 62/318 (19%)

Query: 111 ACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
            C  ++  +D  +++L  +P ++ +   TL +LLL  N +R L   L             
Sbjct: 10  GCNRQVEYIDKRHSNLFNIPDDVLRYARTLEELLLDANHIRDLPRGLFR----------- 58

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                             +T   RLSV   E+S        +P++I     +  LD+S+N
Sbjct: 59  ------------------LTKLRRLSVNDNEIS-------QLPADIANLMNLVDLDVSKN 93

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            IQE+P  +    SLQ+   S N +   P A    L SL+ L L++  L Q+P D F  +
Sbjct: 94  DIQEIPENIKYLKSLQSADFSSNPLSKLP-AGFVQLRSLTVLGLNDVSLTQLPHD-FGSL 151

Query: 290 PMLQILDLSYN-IASLP--------------ENPPFSSLP-------HLQELYLRRMQLR 327
             L  L+L  N +  LP               +  F  LP        LQEL+L   +L 
Sbjct: 152 SNLVSLELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPVVVGQLSSLQELWLDSNELS 211

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
             P +I +L++L  LD+S+N L  +P+   +L SLT+L  S N + +LP ++G L   L 
Sbjct: 212 TLPKEIGQLRRLMCLDVSENKLSHLPDELCDLESLTDLHFSQNYLESLPEDIGRLR-KLT 270

Query: 388 ALRLDGNPLRSIRRTILD 405
             ++D N L S+  +I D
Sbjct: 271 IFKVDQNRLGSLPESIGD 288


>gi|348529816|ref|XP_003452408.1| PREDICTED: leucine-rich repeat-containing protein 7 [Oreochromis
           niloticus]
          Length = 1645

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 184/390 (47%), Gaps = 62/390 (15%)

Query: 35  LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 93
           L  +P+ I S  R L  L L  N+I  +P  +  C +L +  M +N LS LP  +  L  
Sbjct: 47  LQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVN 106

Query: 94  LGTLDLHSNQLKEY--CVEACQ----------------------LRLSVLDLSNNSLSGL 129
           L  LD+  N ++E+   ++ C+                      L L+ L L++  L  L
Sbjct: 107 LKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYL 166

Query: 130 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 189
           P   G+++ LR L L  N L+T+  S+       L +  R  L  NE SE     E +  
Sbjct: 167 PANFGRLSKLRILELRENHLKTMPKSIHR-----LTQLERLDLGSNEFSEVPEVLEQIHN 221

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
           +        KEL L+  +L  IP  I +  ++  LDL++N I+ L  ++S C +L+ L+L
Sbjct: 222 L--------KELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDADISGCEALEDLLL 273

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 308
           S N ++  PD+I   L  L+ LK+D+N L  +P +    + +L+ LD S N + SLP   
Sbjct: 274 SSNMLQHLPDSI-GMLKKLTTLKVDDNQLTSLP-NTIGSLSLLEELDCSCNELESLPPTI 331

Query: 309 PF--------------SSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
            +              S LP       ++  + LR  +L   P +I ++ +LR+L+LS N
Sbjct: 332 GYLHSLRTFAADENFLSELPREIGNCKNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDN 391

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L+++P  F  L  L  L LSDN   AL P
Sbjct: 392 RLKNLPFTFTKLKDLAALWLSDNQSKALIP 421



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 114/217 (52%), Gaps = 10/217 (4%)

Query: 201 LSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           L     +L  +P EI+     + +L L  N I+ELP +L +C +L+ L +  N + + P 
Sbjct: 40  LDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPT 99

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 318
            I  SL +L  L +  N +++ P D  K    L +++ S N I  LP+   F+ L +L +
Sbjct: 100 TI-ASLVNLKELDISKNGIQEFP-DNIKCCKGLSVVEASVNPITKLPDG--FTQLLNLTQ 155

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L+L    L   P +  RL +LRIL+L +N L+++P+    LT L  LDL  N  S +P  
Sbjct: 156 LFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEV 215

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           L  +  +L+ L LD N L++I  +I   G    L+YL
Sbjct: 216 LEQIH-NLKELWLDNNSLQTIPGSI---GKLRQLRYL 248



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 146/319 (45%), Gaps = 62/319 (19%)

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           C    +  +SVLD S+ SL  +P EI     TL +L L  N +  L   L N    AL  
Sbjct: 29  CFRGEEEVISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFN--CQAL-- 84

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                                           K+LS+   +LS +P+ I     + +LD+
Sbjct: 85  --------------------------------KKLSMPDNDLSNLPTTIASLVNLKELDI 112

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S+N IQE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 113 SKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDG-FTQLLNLTQLFLNDAFLEYLPAN-F 170

Query: 287 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLP-------HLQELYLRRM 324
             +  L+IL+L  N + ++P+              +  FS +P       +L+EL+L   
Sbjct: 171 GRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNN 230

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
            L+  P  I +L+QLR LDL++N ++++        +L +L LS N +  LP  +G+L+ 
Sbjct: 231 SLQTIPGSIGKLRQLRYLDLAKNRIETLDADISGCEALEDLLLSSNMLQHLPDSIGMLK- 289

Query: 385 SLQALRLDGNPLRSIRRTI 403
            L  L++D N L S+  TI
Sbjct: 290 KLTTLKVDDNQLTSLPNTI 308



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 160/338 (47%), Gaps = 27/338 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N L+ L    IAS   L EL  SKN +   P+ I     L  ++   N I  
Sbjct: 84  LKKLSMPDNDLSNLPTT-IASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITK 142

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P   +   +L + ++ +  L  LPA  G+LSKL  L+L  N LK       +L +L  L
Sbjct: 143 LPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERL 202

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL +N  S +P  + ++  L++L L  N L+T+  S+        L   ++R+ E  D++
Sbjct: 203 DLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRI-ETLDAD 261

Query: 180 ASTTK--EDL-------------ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
            S  +  EDL             I M  +L+     L ++   L+++P+ I     + +L
Sbjct: 262 ISGCEALEDLLLSSNMLQHLPDSIGMLKKLTT----LKVDDNQLTSLPNTIGSLSLLEEL 317

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           D S N ++ LPP +    SL+T     N + + P  I  +  +++ + L +N L  +P D
Sbjct: 318 DCSCNELESLPPTIGYLHSLRTFAADENFLSELPREI-GNCKNVTVMSLRSNKLEFLP-D 375

Query: 285 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 321
               +  L++L+LS N + +LP    F+ L  L  L+L
Sbjct: 376 EIGQMTKLRVLNLSDNRLKNLPFT--FTKLKDLAALWL 411



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 116/269 (43%), Gaps = 61/269 (22%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           +N L  MP++I  L++L RLDL  N    +P  +    +L E ++ NN+L  +P  +GKL
Sbjct: 183 ENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKL 242

Query: 92  SKLGTLDLHSNQLK--EYCVEACQL----------------------RLSVLDLSNNSLS 127
            +L  LDL  N+++  +  +  C+                       +L+ L + +N L+
Sbjct: 243 RQLRYLDLAKNRIETLDADISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLT 302

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            LP  IG ++ L +L  + N L +L         P  + YL S                L
Sbjct: 303 SLPNTIGSLSLLEELDCSCNELESL---------PPTIGYLHS----------------L 337

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
            T A   +            LS +P EI     +T + L  N ++ LP E+     L+ L
Sbjct: 338 RTFAADENF-----------LSELPREIGNCKNVTVMSLRSNKLEFLPDEIGQMTKLRVL 386

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
            LS N++K+ P    T L  L+ L L +N
Sbjct: 387 NLSDNRLKNLP-FTFTKLKDLAALWLSDN 414



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 111/256 (43%), Gaps = 38/256 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ + +   ++     L EL    N L  +P +IG L +L  LDL +NRI +
Sbjct: 199 LERLDLGSNEFSEVPE-VLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIET 257

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           + + ISGC +L +  + +N L  LP  +G L KL TL +  NQL         L  L  L
Sbjct: 258 LDADISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPNTIGSLSLLEEL 317

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D S N L  LPP IG + +LR      N L                    S LP      
Sbjct: 318 DCSCNELESLPPTIGYLHSLRTFAADENFL--------------------SELPRE---- 353

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                   I     ++V    +SL    L  +P EI +  ++  L+LS N ++ LP   +
Sbjct: 354 --------IGNCKNVTV----MSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFT 401

Query: 240 SCASLQTLILSRNKIK 255
               L  L LS N+ K
Sbjct: 402 KLKDLAALWLSDNQSK 417



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 279 RQVPSDGFK-DIPMLQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDILR 335
           R VP   F+ +  ++ +LD S+   SL + P   FS    L+ELYL   Q+ E P  +  
Sbjct: 23  RLVPCRCFRGEEEVISVLDYSH--CSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFN 80

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
            Q L+ L +  N L ++P    +L +L ELD+S N I   P
Sbjct: 81  CQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEFP 121


>gi|92098125|gb|AAI15013.1| Erbb2 interacting protein [Homo sapiens]
          Length = 1371

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPEPI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PE IGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPEPIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPEPIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|320166678|gb|EFW43577.1| hypothetical protein CAOG_01621 [Capsaspora owczarzaki ATCC 30864]
          Length = 697

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 201/434 (46%), Gaps = 69/434 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLDV  N+L+ L    I     L  L  S N LN +P+ IG+L  L  L    NR+  
Sbjct: 38  VEKLDVSNNELSSLPLE-IGVLRTLKVLDISHNNLNALPQEIGNLVALTHLHASHNRLFY 96

Query: 61  IP--SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 117
            P   +I     L    +G N L  LP E G L  L  +DL +N LK   V  C++  L 
Sbjct: 97  SPLTKAIGRLVMLTRIDLGFNQLEDLPDEFGHLRNLKYIDLSNNDLKIIPVCVCKIAGLE 156

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            L+L  N +  +PPEIG++T+L++ LL  N +  L + +  G    L+K           
Sbjct: 157 YLNLEQNKIKLVPPEIGQLTSLKEWLLNNNNINKLPAEV--GSLSKLVK----------- 203

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL-SRNSIQELPP 236
                     +T+A               NL  +P    E  +I +LDL   N++ ELP 
Sbjct: 204 ----------VTLAFN-------------NLRELPKAAGEWVDIEELDLRENNNMVELPA 240

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-LRQVPSDGFKDIPMLQIL 295
                  L+ L++   K++  P A  ++ + L+ L+L +NP L+++P D    +  L  L
Sbjct: 241 TSQLWKKLRKLLMRNTKLEKLP-AGFSAWTRLNELELKDNPQLQEIPED-IGQLNSLTRL 298

Query: 296 DLS-YNIASLPENPP-----------------------FSSLPHLQELYLRRMQLREAPT 331
           DLS   + +LP++                           ++  +++LYL+  ++   P 
Sbjct: 299 DLSSCCLTTLPDSVAQLTQLQLLDLRQNQLTTYCIPQGMRNMQSMKKLYLQENRIEIVPD 358

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           D+L ++ L  LD+S N++ S+ +  + LT LT+L LS N + +LP  +G+L  +LQ L +
Sbjct: 359 DVLEIKSLVELDMSSNTMYSLADDIRKLTMLTKLSLSFNALESLPASIGML-TNLQTLEV 417

Query: 392 DGNPLRSIRRTILD 405
             N L ++   I D
Sbjct: 418 RNNQLSALPDEIGD 431



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 40/248 (16%)

Query: 19  IASWTMLTELIASKN-LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
            ++WT L EL    N  L  +PE IG L+ L RLDL    + ++P S++    L    + 
Sbjct: 265 FSAWTRLNELELKDNPQLQEIPEDIGQLNSLTRLDLSSCCLTTLPDSVAQLTQLQLLDLR 324

Query: 78  NNALS--ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 134
            N L+   +P  +  +  +  L L  N+++    +  +++ L  LD+S+N++  L  +I 
Sbjct: 325 QNQLTTYCIPQGMRNMQSMKKLYLQENRIEIVPDDVLEIKSLVELDMSSNTMYSLADDIR 384

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
           K+T L KL L+ N L +L +S                                I M T L
Sbjct: 385 KLTMLTKLSLSFNALESLPAS--------------------------------IGMLTNL 412

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
               + L +    LSA+P EI +   + KLD+S N I +LP  +   ++LQTL  S N++
Sbjct: 413 ----QTLEVRNNQLSALPDEIGDLRSLIKLDVSNNKISKLPTSMCQLSALQTLDTSHNQL 468

Query: 255 KDWPDAIL 262
            + P  I+
Sbjct: 469 VEPPADII 476



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 75/136 (55%), Gaps = 2/136 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M KL ++ N++ ++ ++++   + L EL  S N +  + + I  L+ L +L L  N + S
Sbjct: 343 MKKLYLQENRIEIVPDDVLEIKS-LVELDMSSNTMYSLADDIRKLTMLTKLSLSFNALES 401

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+SI    +L    + NN LSALP E+G L  L  LD+ +N++ +     CQL  L  L
Sbjct: 402 LPASIGMLTNLQTLEVRNNQLSALPDEIGDLRSLIKLDVSNNKISKLPTSMCQLSALQTL 461

Query: 120 DLSNNSLSGLPPEIGK 135
           D S+N L   P +I K
Sbjct: 462 DTSHNQLVEPPADIIK 477



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 43/71 (60%)

Query: 310 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
           FS L   Q + L + QL+E    I RL+++  LD+S N L S+P     L +L  LD+S 
Sbjct: 9   FSKLKSQQAVDLSKQQLKELNPAIERLERVEKLDVSNNELSSLPLEIGVLRTLKVLDISH 68

Query: 370 NNISALPPELG 380
           NN++ALP E+G
Sbjct: 69  NNLNALPQEIG 79



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 3/92 (3%)

Query: 286 FKDIPMLQILDLSYNIASLPE-NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
           F  +   Q +DLS     L E NP    L  +++L +   +L   P +I  L+ L++LD+
Sbjct: 9   FSKLKSQQAVDLSKQ--QLKELNPAIERLERVEKLDVSNNELSSLPLEIGVLRTLKVLDI 66

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           S N+L ++P+   NL +LT L  S N +   P
Sbjct: 67  SHNNLNALPQEIGNLVALTHLHASHNRLFYSP 98


>gi|380814690|gb|AFE79219.1| protein LAP2 isoform 2 [Macaca mulatta]
 gi|383419995|gb|AFH33211.1| protein LAP2 isoform 2 [Macaca mulatta]
          Length = 1370

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 189/401 (47%), Gaps = 64/401 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG------------- 128
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S              
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 129 ----------LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
                     LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +
Sbjct: 143 LYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFT 197

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E     E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +
Sbjct: 198 EVPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGI 249

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S
Sbjct: 250 SACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLIYLP-DSIGGLISVEELDCS 307

Query: 299 YN-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRL 336
           +N + +LP +                     P   S  ++  L+L   +L   P ++  +
Sbjct: 308 FNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDM 367

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 368 QKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLIY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 24/251 (9%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 312
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 373 SALPPELGLLE 383
           + +P  +G L+
Sbjct: 220 TFIPGFIGSLK 230


>gi|260793228|ref|XP_002591614.1| hypothetical protein BRAFLDRAFT_80710 [Branchiostoma floridae]
 gi|229276823|gb|EEN47625.1| hypothetical protein BRAFLDRAFT_80710 [Branchiostoma floridae]
          Length = 1504

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 123/380 (32%), Positives = 172/380 (45%), Gaps = 45/380 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKN-LLNGMPETIGSLSRLIRLDLHQNRIL 59
           + +LD   N++++++N      T LT L  S N L N   +    L  L  L LH N++ 
Sbjct: 75  LGRLDASSNQISIINNGTFHDLTSLTYLYLSNNQLTNLTADMFEGLRNLQVLWLHHNQLK 134

Query: 60  SIPSSI-SGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQ--LR 115
           S+P+ I  G  SL   ++ +N LS+LP  + + L  LG L L  NQL        +   R
Sbjct: 135 SLPADIFEGLGSLRNLFLSHNQLSSLPDGIFEGLGSLGDLRLDQNQLSNLSASIFEGLGR 194

Query: 116 LSVLDLSNNSLSGLPPEIGK-MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           L  + LS+N LS LP  I K + +L+ L L  N LR L   +  G     L  LR     
Sbjct: 195 LGGVFLSDNQLSSLPATIFKGLDSLQDLRLDRNQLRNLPPGIFEG-----LGSLRV---- 245

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQE 233
                                     L L    LS IP++++E  G + +L L+ N +  
Sbjct: 246 --------------------------LILNQNRLSNIPADMFEGLGNLQELYLATNQLSS 279

Query: 234 LPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
           LP  L     SLQ L L +N++   P  I    S+L  L L  N    +P+D F  +  L
Sbjct: 280 LPANLFQGLGSLQRLWLQQNQLTALPAGIFEGFSNLQYLYLHENQFSILPTDTFLGLDSL 339

Query: 293 QILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQS 351
            +L L  N  S  +   F  L +LQ+LYL + QL   P  I   L  L  L L QN L S
Sbjct: 340 LLLYLGRNQLSSLQPDMFEGLDNLQQLYLYQNQLTVLPAGIFEGLNSLHYLWLDQNQLPS 399

Query: 352 IPEG-FKNLTSLTELDLSDN 370
           +P G F+ L SL  L LS+N
Sbjct: 400 LPAGIFEGLGSLQYLYLSNN 419



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 125/245 (51%), Gaps = 7/245 (2%)

Query: 179 EASTTKEDLITMATRLSVTS-KELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPP 236
           +AS+ +  +I   T   +TS   L L    L+ + ++++E    +  L L  N ++ LP 
Sbjct: 79  DASSNQISIINNGTFHDLTSLTYLYLSNNQLTNLTADMFEGLRNLQVLWLHHNQLKSLPA 138

Query: 237 EL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
           ++     SL+ L LS N++   PD I   L SL  L+LD N L  + +  F+ +  L  +
Sbjct: 139 DIFEGLGSLRNLFLSHNQLSSLPDGIFEGLGSLGDLRLDQNQLSNLSASIFEGLGRLGGV 198

Query: 296 DLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIP 353
            LS N ++SLP    F  L  LQ+L L R QLR  P  I   L  LR+L L+QN L +IP
Sbjct: 199 FLSDNQLSSLPATI-FKGLDSLQDLRLDRNQLRNLPPGIFEGLGSLRVLILNQNRLSNIP 257

Query: 354 -EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVL 412
            + F+ L +L EL L+ N +S+LP  L     SLQ L L  N L ++   I +  +    
Sbjct: 258 ADMFEGLGNLQELYLATNQLSSLPANLFQGLGSLQRLWLQQNQLTALPAGIFEGFSNLQY 317

Query: 413 KYLKD 417
            YL +
Sbjct: 318 LYLHE 322



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 176/414 (42%), Gaps = 73/414 (17%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL----NGMPETIGSLSRLIRLDLHQN 56
            ++ L +  N +  LS +  + +T L  L    N +    NG   T   L+ L  L L  N
Sbjct: 739  ITSLHLSRNAIATLSRSDFSKYTRLNSLYLGSNQITMINNG---TFQDLTSLTNLYLSSN 795

Query: 57   RILSIPS-SISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQL 114
            ++ ++ S +  G   L   ++  N L+ LPA + + L KL TL L+SNQL        + 
Sbjct: 796  QLSNLTSGTFDGLGKLWSLHLEGNQLTTLPAGIFEGLGKLFTLKLNSNQLTNLTGGMFEG 855

Query: 115  --RLSVLDLSNNSLSGLPPEIG-KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 171
               L  L LS N  SGLP E+  ++  LR L L  N L T                    
Sbjct: 856  LGGLQQLYLSYNRFSGLPAEMFVELKDLRTLYLGHNALST-------------------- 895

Query: 172  LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNS 230
                          D+    ++ +     LSL+G  L+ + ++++E    +  LDLS+N 
Sbjct: 896  --------------DIFQQLSKDTDNLGRLSLQGTQLTNLTADMFEGLSSLYWLDLSQNL 941

Query: 231  IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
            +  LP +                          SL  L  L+L  N L  +P D F  + 
Sbjct: 942  LTSLPAD-----------------------TFESLGGLYYLQLSRNQLSSLPVDIFLALS 978

Query: 291  MLQILDLSYNIASLPENPPFSSL-PHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNS 348
             L+ LDLS+N  +  +   F+     L ELYL   QL   P D+   L++L  LDL QN 
Sbjct: 979  RLESLDLSFNQFTSLQAGIFAGFGSSLVELYLSGNQLVSLPADLFEGLERLWYLDLDQNE 1038

Query: 349  LQSIPEG-FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
            L S+P   F+ L SL  L L+ N +++LP ++     ++  L L  NP +   R
Sbjct: 1039 LSSLPGSIFQGLASLEALWLASNQLTSLPGDIFRGLGNMWYLTLYWNPWQCDCR 1092



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 143/309 (46%), Gaps = 45/309 (14%)

Query: 79  NALSALP-AELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGK 135
           NA++AL  ++  +   LG LD  SNQ+             L+ L LSNN L+ L  ++ +
Sbjct: 59  NAITALSRSDFSRYRNLGRLDASSNQISIINNGTFHDLTSLTYLYLSNNQLTNLTADMFE 118

Query: 136 -MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            +  L+ L L  N L++L + +  G     L  LR+                        
Sbjct: 119 GLRNLQVLWLHHNQLKSLPADIFEG-----LGSLRN------------------------ 149

Query: 195 SVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPEL-SSCASLQTLILSRN 252
                 L L    LS++P  I+E  G +  L L +N +  L   +      L  + LS N
Sbjct: 150 ------LFLSHNQLSSLPDGIFEGLGSLGDLRLDQNQLSNLSASIFEGLGRLGGVFLSDN 203

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
           ++   P  I   L SL  L+LD N LR +P   F+ +  L++L L+ N ++++P +  F 
Sbjct: 204 QLSSLPATIFKGLDSLQDLRLDRNQLRNLPPGIFEGLGSLRVLILNQNRLSNIPAD-MFE 262

Query: 312 SLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIPEG-FKNLTSLTELDLSD 369
            L +LQELYL   QL   P ++ + L  L+ L L QN L ++P G F+  ++L  L L +
Sbjct: 263 GLGNLQELYLATNQLSSLPANLFQGLGSLQRLWLQQNQLTALPAGIFEGFSNLQYLYLHE 322

Query: 370 NNISALPPE 378
           N  S LP +
Sbjct: 323 NQFSILPTD 331



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 79/167 (47%), Gaps = 8/167 (4%)

Query: 232 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 291
           Q+LP      A++ +L LSRN I     +  +  + L+ L L +N +  + +  F+D+  
Sbjct: 733 QDLP------ATITSLHLSRNAIATLSRSDFSKYTRLNSLYLGSNQITMINNGTFQDLTS 786

Query: 292 LQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQ 350
           L  L LS N  S   +  F  L  L  L+L   QL   P  I   L +L  L L+ N L 
Sbjct: 787 LTNLYLSSNQLSNLTSGTFDGLGKLWSLHLEGNQLTTLPAGIFEGLGKLFTLKLNSNQLT 846

Query: 351 SIPEG-FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           ++  G F+ L  L +L LS N  S LP E+ +    L+ L L  N L
Sbjct: 847 NLTGGMFEGLGGLQQLYLSYNRFSGLPAEMFVELKDLRTLYLGHNAL 893


>gi|380814688|gb|AFE79218.1| protein LAP2 isoform 7 [Macaca mulatta]
          Length = 1301

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 186/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLIYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLIY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 24/251 (9%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 312
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 373 SALPPELGLLE 383
           + +P  +G L+
Sbjct: 220 TFIPGFIGSLK 230



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NIRTFAADHNYLQQL 337


>gi|297294412|ref|XP_001088781.2| PREDICTED: protein LAP2 [Macaca mulatta]
          Length = 1418

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 186/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLIYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLIY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 24/251 (9%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 312
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 373 SALPPELGLLE 383
           + +P  +G L+
Sbjct: 220 TFIPGFIGSLK 230



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NIRTFAADHNYLQQL 337


>gi|327263157|ref|XP_003216387.1| PREDICTED: protein LAP2-like isoform 1 [Anolis carolinensis]
          Length = 1363

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 183/400 (45%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  +     +  LD+S+N+I+ L   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDGNRLTLIPGFMGSLKHLIYLDVSKNNIETLEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C SLQ L+LS N ++  P++I   L  L+ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 GCESLQDLLLSSNSLQQLPESI-GCLKKLAILKIDENQLMYLP-DSIGGLTSVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   +  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSVGQLSNIRTFAADHNFLTQLPPEIGNWKYVTVLFLHSNKLEFLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+ +P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKYLPYSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 148/311 (47%), Gaps = 30/311 (9%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N    A+++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYN-IASLPENPPFS 311
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N I +L E    S
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDGNRLTLIP--GFMGSLKHLIYLDVSKNNIETLEEG--IS 250

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
               LQ+L L    L++ P  I  L++L IL + +N L  +P+    LTS+ ELD S N 
Sbjct: 251 GCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDENQLMYLPDSIGGLTSVEELDCSFNE 310

Query: 372 ISALPPELGLL 382
           I ALP  +G L
Sbjct: 311 IEALPSSVGQL 321



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 40/257 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T +   ++   + L E     N L  +P  +GSL  LI LD+ +N I +
Sbjct: 186 LERLDLGSNEFTEVPE-VLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSKNNIET 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-- 118
           +   ISGC SL +  + +N+L  LP  +G L KL  L +  NQL  Y  ++     SV  
Sbjct: 245 LEEGISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDENQLM-YLPDSIGGLTSVEE 303

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LD S N +  LP  +G+++ +R      N L  L   + N       KY           
Sbjct: 304 LDCSFNEIEALPSSVGQLSNIRTFAADHNFLTQLPPEIGN------WKY----------- 346

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                    +T+          L L    L  +P E+ +  ++  ++LS N ++ LP   
Sbjct: 347 ---------VTV----------LFLHSNKLEFLPEEMGDMQKLKVINLSDNRLKYLPYSF 387

Query: 239 SSCASLQTLILSRNKIK 255
           +    L  + LS N+ K
Sbjct: 388 TKLQQLTAMWLSDNQSK 404


>gi|149731086|ref|XP_001491455.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Equus caballus]
          Length = 561

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 174/390 (44%), Gaps = 38/390 (9%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L  +P+ I + ++L  + L QN+    P  +    +L    +  N LS +P E+  L 
Sbjct: 153 NHLKSLPKEIVNETKLREIYLKQNKFEVFPPELCLLYNLEIIDLDENKLSVIPEEIRNLE 212

Query: 93  KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
           +L    +  N L       CQ R LSVLDLS+N L  +P  + ++  + ++ L+GN L  
Sbjct: 213 RLQKFFVAYNSLPCLPESLCQCRQLSVLDLSHNRLHTIPRALAQLPGMTEVALSGNHLEK 272

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
           +   L    T  LL YLR             T    +  + R  V  + L L   +L   
Sbjct: 273 VPRLLCKW-TSLLLLYLR------------CTGLRSLPRSFRRLVHLRFLDLSQNHLVHC 319

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P  I    ++  L L  N I +LPP+ SS + L+ L L+ N+   +P+ IL SL SL  L
Sbjct: 320 PLPICALKDLEILALDDNKIWQLPPDFSSLSKLKMLGLTGNQFFSFPEEIL-SLESLEKL 378

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT 331
            +                      D    + S+PE+     L  L+EL++    L+  P 
Sbjct: 379 YIGQ--------------------DQGTKLTSMPES--IRRLQSLKELHIENNHLQYLPV 416

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
            +  +  L+ILD   N L+ +P+      +L EL L DN ++ +P  L  L  +L+ L L
Sbjct: 417 SLGSMPNLKILDCRHNLLKQLPDAICQAQALKELLLEDNLLTCIPENLDSLA-NLKTLTL 475

Query: 392 DGNPLRSIRRTILDRGTKAVLKYLKDKIPE 421
             NP+    + +   GT+A+  YL+ K  E
Sbjct: 476 TDNPMEDPPKEVCAEGTEAIRAYLRKKRKE 505



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 175/373 (46%), Gaps = 51/373 (13%)

Query: 74  FYM--GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 130
           F+M   N +L+ +P+E+ +L +L  + L +NQ++E   +  +L+ + +L L+ N L  L 
Sbjct: 29  FFMDASNQSLATIPSEILELQELEEVHLENNQIEEIPRDIQRLKNMRILYLNKNKLRTLC 88

Query: 131 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 190
           PE+G++++L  L L+ NPL  L SSL   P  + ++ LR      E     T  E++  +
Sbjct: 89  PELGELSSLEGLDLSDNPL--LPSSL---PVLSGIRTLR------ELRLYHTDLEEIPVV 137

Query: 191 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 250
             +L    + L L G +L ++P EI    ++ ++ L +N  +  PPEL    +L+ + L 
Sbjct: 138 IFKLLHHLELLGLAGNHLKSLPKEIVNETKLREIYLKQNKFEVFPPELCLLYNLEIIDLD 197

Query: 251 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--------IA 302
            NK+   P+ I  +L  L    +  N L  +P +       L +LDLS+N        +A
Sbjct: 198 ENKLSVIPEEI-RNLERLQKFFVAYNSLPCLP-ESLCQCRQLSVLDLSHNRLHTIPRALA 255

Query: 303 SLPENPPFS-SLPHLQE-------------LYLRRMQLREAPTDILRLQQLRILDLSQNS 348
            LP     + S  HL++             LYLR   LR  P    RL  LR LDLSQN 
Sbjct: 256 QLPGMTEVALSGNHLEKVPRLLCKWTSLLLLYLRCTGLRSLPRSFRRLVHLRFLDLSQNH 315

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL---- 404
           L   P     L  L  L L DN I  LPP+   L   L+ L L GN   S    IL    
Sbjct: 316 LVHCPLPICALKDLEILALDDNKIWQLPPDFSSLS-KLKMLGLTGNQFFSFPEEILSLES 374

Query: 405 --------DRGTK 409
                   D+GTK
Sbjct: 375 LEKLYIGQDQGTK 387



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 168/395 (42%), Gaps = 67/395 (16%)

Query: 56  NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC--- 112
           N+I  IP  I    ++   Y+  N L  L  ELG+LS L  LDL  N L    +      
Sbjct: 59  NQIEEIPRDIQRLKNMRILYLNKNKLRTLCPELGELSSLEGLDLSDNPLLPSSLPVLSGI 118

Query: 113 ----QLRLSVLDL-------------------SNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
               +LRL   DL                   + N L  LP EI   T LR++ L  N  
Sbjct: 119 RTLRELRLYHTDLEEIPVVIFKLLHHLELLGLAGNHLKSLPKEIVNETKLREIYLKQNKF 178

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
                       P L       + + ++++ S   E++  +  RL    ++  +   +L 
Sbjct: 179 EVF--------PPELCLLYNLEIIDLDENKLSVIPEEIRNLE-RL----QKFFVAYNSLP 225

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P  + +  +++ LDLS N +  +P  L+    +  + LS N ++  P  +L   +SL 
Sbjct: 226 CLPESLCQCRQLSVLDLSHNRLHTIPRALAQLPGMTEVALSGNHLEKVP-RLLCKWTSLL 284

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN----------------IASLPEN------ 307
            L L    LR +P   F+ +  L+ LDLS N                I +L +N      
Sbjct: 285 LLYLRCTGLRSLPR-SFRRLVHLRFLDLSQNHLVHCPLPICALKDLEILALDDNKIWQLP 343

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS---LQSIPEGFKNLTSLTE 364
           P FSSL  L+ L L   Q    P +IL L+ L  L + Q+    L S+PE  + L SL E
Sbjct: 344 PDFSSLSKLKMLGLTGNQFFSFPEEILSLESLEKLYIGQDQGTKLTSMPESIRRLQSLKE 403

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L + +N++  LP  LG + P+L+ L    N L+ +
Sbjct: 404 LHIENNHLQYLPVSLGSM-PNLKILDCRHNLLKQL 437


>gi|440904131|gb|ELR54685.1| Leucine-rich repeat-containing protein 40 [Bos grunniens mutus]
          Length = 404

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 130/221 (58%), Gaps = 11/221 (4%)

Query: 207 NLSAIPSE-IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 265
           NLS   SE  WE  ++TKL +S N +Q L  +L    +L  L +  N++   P AI   L
Sbjct: 23  NLSFNASERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAI-REL 81

Query: 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ--ELYLR 322
            +L  L + +N L+ +P +   ++  L+ L L +N +  +PE   F  L +L+  EL++ 
Sbjct: 82  ENLQKLNVSHNKLKILPEE-ITNLRNLKGLYLQHNELTCIPEG--FEQLNNLEDLELHVG 138

Query: 323 RMQLREAPTDILR-LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGL 381
             Q+     + L+ L  + +LDL  N L+S+P+    L SL  LDLS+N+IS+LP  LG 
Sbjct: 139 ENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGR 198

Query: 382 LEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
           L   L+ L L+GNPLR+IRR I+++GT+ VLKYL+ KI ++
Sbjct: 199 LH--LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDD 237



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 157/338 (46%), Gaps = 70/338 (20%)

Query: 14  LSNNLIASW---TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 70
           LS N    W   T LT+LI S N L  + + +  L  L  LD+H N++ S+PS+I    +
Sbjct: 24  LSFNASERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELEN 83

Query: 71  LAEFYMGNNALSALPAELGKLSKLG----------------------------------- 95
           L +  + +N L  LP E+  L  L                                    
Sbjct: 84  LQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQLNNLEDLELHVGENQIE 143

Query: 96  --------------TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 140
                          LDL  N+LK    E   L+ L  LDLSNN +S LP  +G++  L+
Sbjct: 144 MLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGRL-HLK 202

Query: 141 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM--ATRLSV-- 196
            L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S+  +  E  +T+   +R++V  
Sbjct: 203 FLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQNDSVIETAMTLPSESRVNVHT 262

Query: 197 --TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELP------PE-LSSCASL 244
             T K L       + IP E+++A +   IT ++ S+N + E+P      PE L    +L
Sbjct: 263 IITLKMLDYSDKQTALIPDEVFDAVKSNIITSINFSKNQLCEIPKRFKILPEVLYRIPTL 322

Query: 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           +T+++S N +       + ++ +L  L L NN L Q+P
Sbjct: 323 ETILISNNHVGSLDPQKMKTMENLITLDLQNNDLLQIP 360



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 8/120 (6%)

Query: 56  NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL- 114
           N I SI  S +  C + + +        LP  L ++  L T+ + +N +     +  +  
Sbjct: 290 NIITSINFSKNQLCEIPKRF------KILPEVLYRIPTLETILISNNHVGSLDPQKMKTM 343

Query: 115 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
             L  LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 344 ENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 403


>gi|355749960|gb|EHH54298.1| Erbb2-interacting protein [Macaca fascicularis]
          Length = 1411

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 189/401 (47%), Gaps = 64/401 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG------------- 128
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S              
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 129 ----------LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
                     LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +
Sbjct: 143 LYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFT 197

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E     E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +
Sbjct: 198 EVPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGI 249

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           S+C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S
Sbjct: 250 SACENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLIYLP-DSIGGLISVEELDCS 307

Query: 299 YN-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRL 336
           +N + +LP +                     P   S  ++  L+L   +L   P ++  +
Sbjct: 308 FNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDM 367

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           Q+L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 368 QKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLIY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 24/251 (9%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 312
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 373 SALPPELGLLE 383
           + +P  +G L+
Sbjct: 220 TFIPGFIGSLK 230


>gi|6782322|emb|CAB70601.1| Vartul-1 protein [Drosophila melanogaster]
          Length = 1756

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T KEL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|24650330|ref|NP_524754.2| scribbled, isoform D [Drosophila melanogaster]
 gi|51701662|sp|Q7KRY7.1|LAP4_DROME RecName: Full=Protein lap4; AltName: Full=Protein scribble;
           AltName: Full=Protein smell-impaired
 gi|23172361|gb|AAF56598.2| scribbled, isoform D [Drosophila melanogaster]
          Length = 1851

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|291225878|ref|XP_002732925.1| PREDICTED: caspase-8-like [Saccoglossus kowalevskii]
          Length = 542

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 113/217 (52%), Gaps = 4/217 (1%)

Query: 203 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAIL 262
           L G +L ++P+E W+  +I KL L  N +++LPP+L    +LQ LILS N    +P  + 
Sbjct: 32  LRGKSLKSVPAEAWQDRDIYKLSLQGNKLKDLPPQLRRLKNLQELILSFNAFDKFP-LVA 90

Query: 263 TSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQELYL 321
               +L  L +  N L+ V S     +  LQ L L+ N+    PE      L +L++LYL
Sbjct: 91  CDFQNLRTLSVSRNRLKTVSSQ-ICQLTNLQDLWLTGNVFEEFPEALCSVELGNLEKLYL 149

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGL 381
              ++   P  I RL++L++L+++ N ++ IPE F  L +L       N I  LPP+ G 
Sbjct: 150 YDNKIANIPQGIARLKKLKVLNINNNKVREIPEAFYELKNLENFHAKGNKIKKLPPKFGT 209

Query: 382 LEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
               ++ L L+GNPL      +  RG  A+ K  +DK
Sbjct: 210 ELNQIKLLELNGNPLVIPSLAVCQRGINAI-KDFQDK 245



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/252 (21%), Positives = 105/252 (41%), Gaps = 31/252 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL ++GNKL  L   L      L ELI S N  +  P        L  L + +NR+ +
Sbjct: 50  IYKLSLQGNKLKDLPPQL-RRLKNLQELILSFNAFDKFPLVACDFQNLRTLSVSRNRLKT 108

Query: 61  IPSSI--------------------SGCCS-----LAEFYMGNNALSALPAELGKLSKLG 95
           + S I                       CS     L + Y+ +N ++ +P  + +L KL 
Sbjct: 109 VSSQICQLTNLQDLWLTGNVFEEFPEALCSVELGNLEKLYLYDNKIANIPQGIARLKKLK 168

Query: 96  TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG-KMTTLRKLLLTGNPLRTLR 153
            L++++N+++E      +L+ L       N +  LPP+ G ++  ++ L L GNPL    
Sbjct: 169 VLNINNNKVREIPEAFYELKNLENFHAKGNKIKKLPPKFGTELNQIKLLELNGNPLVIPS 228

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
            ++      A+  +   +  E E + A+      +    +  + + +   E + ++ IP 
Sbjct: 229 LAVCQRGINAIKDFQDKKKAEAESTRAALLARQQVDGVAQFRMNNND---EKITINGIPK 285

Query: 214 EIWEAGEITKLD 225
            +    ++  +D
Sbjct: 286 LVANKEDVYCID 297



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 52/244 (21%), Positives = 83/244 (34%), Gaps = 56/244 (22%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P        + +L L  N++  +P  +    +L E  +  NA    P        L
Sbjct: 37  LKSVPAEAWQDRDIYKLSLQGNKLKDLPPQLRRLKNLQELILSFNAFDKFPLVACDFQNL 96

Query: 95  GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 154
            TL +  N+LK    + CQL                      T L+ L LTGN       
Sbjct: 97  RTLSVSRNRLKTVSSQICQL----------------------TNLQDLWLTGNVFEEFPE 134

Query: 155 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 214
           +L +     L K                                  L L    ++ IP  
Sbjct: 135 ALCSVELGNLEK----------------------------------LYLYDNKIANIPQG 160

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           I    ++  L+++ N ++E+P       +L+      NKIK  P    T L+ +  L+L+
Sbjct: 161 IARLKKLKVLNINNNKVREIPEAFYELKNLENFHAKGNKIKKLPPKFGTELNQIKLLELN 220

Query: 275 NNPL 278
            NPL
Sbjct: 221 GNPL 224


>gi|28261017|gb|AAO32792.1| scribbled [Drosophila melanogaster]
          Length = 1850

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T KEL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|195997513|ref|XP_002108625.1| hypothetical protein TRIADDRAFT_51723 [Trichoplax adhaerens]
 gi|190589401|gb|EDV29423.1| hypothetical protein TRIADDRAFT_51723 [Trichoplax adhaerens]
          Length = 424

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 177/392 (45%), Gaps = 48/392 (12%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           +N +  +P +IG+L  L+  D+  N +  IPS I  C  L    + +N L+ +PA +G L
Sbjct: 47  ENKIRKLPSSIGNLRMLVIFDVSYNHLEEIPSEIGNCLQLTSLDLQHNELTEIPASIGNL 106

Query: 92  SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
             L  L++  N+                      L+ +PP I  +  L +    GN +  
Sbjct: 107 RSLKRLEIKYNR----------------------LNSVPPSISNIGLLEEFNAEGNNISE 144

Query: 152 L-RSSLVNGPTPALLKYLRSR---LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 207
           L  +SL+   +   ++  R++   LP    S+ + T+  +I               E   
Sbjct: 145 LPVNSLIRMRSLKSIQLSRNKFHELPAGNPSQFAFTQSIVI---------------EHNR 189

Query: 208 LSAIPSEIWE-AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
           +  IPS I++ A  +  L+L  N +  LPP+  +  SL  L L  N +    D  L +L 
Sbjct: 190 IERIPSNIFKLAKLLNSLNLKDNQLASLPPDFGTWTSLTELNLGTNHLGSISDD-LENLV 248

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
           +L  L L NN L  +P +    +  L++L++  N +  LP  P    +  L  L      
Sbjct: 249 NLEVLILSNNMLTSLPQNALPALQKLRVLEIEENELEFLP--PEIGDMSMLTRLVANNNL 306

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELGLLEP 384
           L + P +I +L +L  L   +N L SIPE   NL SL +L L+DN  ++ LP EL + E 
Sbjct: 307 LTQLPKEIGKLSKLMYLAAGENRLMSIPEEIGNLKSLEQLYLNDNEELNDLPLELAMCE- 365

Query: 385 SLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
           SL  + ++G PL  +   +   G   + +YL+
Sbjct: 366 SLHLMSVEGCPLSRLPAEVTAGGPSFIFQYLR 397



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 141/294 (47%), Gaps = 26/294 (8%)

Query: 90  KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           KL +L  LD+  N+LK+        RL+++ L  N +  LP  IG +  L    ++ N L
Sbjct: 22  KLKRLTVLDMRHNKLKD--------RLNLISLRENKIRKLPSSIGNLRMLVIFDVSYNHL 73

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
             + S + N      L+     L  NE +E   +  +L ++        K L ++   L+
Sbjct: 74  EEIPSEIGN-----CLQLTSLDLQHNELTEIPASIGNLRSL--------KRLEIKYNRLN 120

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
           ++P  I   G + + +   N+I ELP   L    SL+++ LSRNK  + P    +  +  
Sbjct: 121 SVPPSISNIGLLEEFNAEGNNISELPVNSLIRMRSLKSIQLSRNKFHELPAGNPSQFAFT 180

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 327
             + +++N + ++PS+ FK   +L  L+L  N +ASLP  P F +   L EL L    L 
Sbjct: 181 QSIVIEHNRIERIPSNIFKLAKLLNSLNLKDNQLASLP--PDFGTWTSLTELNLGTNHLG 238

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPE-GFKNLTSLTELDLSDNNISALPPELG 380
               D+  L  L +L LS N L S+P+     L  L  L++ +N +  LPPE+G
Sbjct: 239 SISDDLENLVNLEVLILSNNMLTSLPQNALPALQKLRVLEIEENELEFLPPEIG 292



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 102/199 (51%), Gaps = 5/199 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRIL 59
           +++L++  N L  +S++L  +   L  LI S N+L  +P+  + +L +L  L++ +N + 
Sbjct: 227 LTELNLGTNHLGSISDDL-ENLVNLEVLILSNNMLTSLPQNALPALQKLRVLEIEENELE 285

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 118
            +P  I     L      NN L+ LP E+GKLSKL  L    N+L     E   L+ L  
Sbjct: 286 FLPPEIGDMSMLTRLVANNNLLTQLPKEIGKLSKLMYLAAGENRLMSIPEEIGNLKSLEQ 345

Query: 119 LDLSNN-SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-E 176
           L L++N  L+ LP E+    +L  + + G PL  L + +  G    + +YLR  L +  +
Sbjct: 346 LYLNDNEELNDLPLELAMCESLHLMSVEGCPLSRLPAEVTAGGPSFIFQYLRVELSQVIQ 405

Query: 177 DSEASTTKEDLITMATRLS 195
           D++  +   + +T+ T LS
Sbjct: 406 DAQDGSMSAEFLTIDTDLS 424



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 14/216 (6%)

Query: 6   VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
           +E N++  + +N+     +L  L    N L  +P   G+ + L  L+L  N + SI   +
Sbjct: 185 IEHNRIERIPSNIFKLAKLLNSLNLKDNQLASLPPDFGTWTSLTELNLGTNHLGSISDDL 244

Query: 66  SGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 123
               +L    + NN L++LP   L  L KL  L++  N+L+    E   +  L+ L  +N
Sbjct: 245 ENLVNLEVLILSNNMLTSLPQNALPALQKLRVLEIEENELEFLPPEIGDMSMLTRLVANN 304

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N L+ LP EIGK++ L  L    N L ++   + N      LK L  +L  N++ E +  
Sbjct: 305 NLLTQLPKEIGKLSKLMYLAAGENRLMSIPEEIGN------LKSLE-QLYLNDNEELNDL 357

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 219
             +L  M   L +    +S+EG  LS +P+E+   G
Sbjct: 358 PLEL-AMCESLHL----MSVEGCPLSRLPAEVTAGG 388


>gi|392338593|ref|XP_003753576.1| PREDICTED: protein LAP2-like [Rattus norvegicus]
 gi|392345308|ref|XP_003749226.1| PREDICTED: protein LAP2-like [Rattus norvegicus]
          Length = 1430

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 184/383 (48%), Gaps = 49/383 (12%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 141
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S LP    ++  L +
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--- 198
           L L                  A L++L +        +    +E+ + M  +  V     
Sbjct: 143 LYLND----------------AFLEFLPANFGRLTKLQILELRENQLKMLPKPEVLEQLS 186

Query: 199 --KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             +E  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S+C +LQ  +LS N ++ 
Sbjct: 187 GLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQ 246

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN-------- 307
            P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+N I +LP +        
Sbjct: 247 LPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLRSIEELDCSFNEIEALPSSIGQLTNIR 304

Query: 308 -------------PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
                        P   +  ++  L+L   +L   P ++  +Q+L++++LS N L+++P 
Sbjct: 305 TFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPF 364

Query: 355 GFKNLTSLTELDLSDNNISALPP 377
            F  L  LT + LSDN    L P
Sbjct: 365 SFTKLQQLTAMWLSDNQSKPLIP 387



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L + + S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 211 LTYLDVSKNNIEMVEEG-ISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 269

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 270 LPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGNWKNVTVL 329

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 330 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 367



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 133/320 (41%), Gaps = 47/320 (14%)

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N  +   L 
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLS 75

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLS--VTSKELSLEGMNLSAIPSEIWEAGEITKL 224
                LP+N          DL T+   ++  +  +EL +    +   P  I     +T +
Sbjct: 76  -----LPDN----------DLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVV 120

Query: 225 DLSRNSIQELPPELSSC-----------------------ASLQTLILSRNKIKDWPD-A 260
           + S N I +LP   S                           LQ L L  N++K  P   
Sbjct: 121 EASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKPE 180

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 319
           +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+  +LQ+ 
Sbjct: 181 VLEQLSGLREFWMDGNRLTFIP--GFIGSLRQLTYLDVSKNNIEMVEEG-ISTCENLQDF 237

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N I ALP  +
Sbjct: 238 LLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSI 297

Query: 380 GLLEPSLQALRLDGNPLRSI 399
           G L  +++    D N L+ +
Sbjct: 298 GQLT-NIRTFAADHNYLQQL 316



 Score = 42.0 bits (97), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 1/105 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD   N++  L ++ I   T +    A  N L  +P  IG+   +  L LH N++ +
Sbjct: 280 IEELDCSFNEIEALPSS-IGQLTNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLET 338

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 105
           +P  +     L    + +N L  LP    KL +L  + L  NQ K
Sbjct: 339 LPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSK 383


>gi|323452027|gb|EGB07902.1| hypothetical protein AURANDRAFT_64486 [Aureococcus anophagefferens]
          Length = 979

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 208/467 (44%), Gaps = 59/467 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN-GMPETIGSLSRLIRLDLHQNRIL 59
           + K+D E   LTV+      + T    L  SKN L+ G+   +     L  LDL  N + 
Sbjct: 170 LQKVDAENCGLTVVDRLPEEART----LCLSKNRLSEGV--DVRHCRWLTYLDLRSNGMA 223

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLS 117
           +   +I    +L+  ++G+N L  +  E      L  +DL +N+L+     + AC   L 
Sbjct: 224 TY--AIPDLPNLSHVFLGHNGLGDVALEKPS-DALAHVDLGANRLRHLPPALGACGG-LQ 279

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP---- 173
            +D SNN L  +P  +G +  L +L L GNPLRTLR  L+      L  YLR+R P    
Sbjct: 280 SIDASNNDLGEVPAALGYLPKLHRLSLEGNPLRTLRRDLLTQGCDRLKAYLRTRGPSLLP 339

Query: 174 -ENEDSEASTTKED-----LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
            E E +  S++ +D      +    R   +   L L+G  L   P    +A  I     +
Sbjct: 340 EEAELARPSSSGDDRLDLRFLANGVRDPESRGVLDLKGRKLERCPLSRDDARTIRDDLAA 399

Query: 228 RNSIQEL---PPELSSCASLQTLILSRNKIKDWPD-AILTSLS-SLSCLKLDNNPLRQVP 282
            + + E    P + +  A +Q +  S N +   P+ A+L  L  +LS LKL  N L  +P
Sbjct: 400 DDGLDEYVADPRKRALVAKVQVVDASNNDLAQPPEAAVLLELGPALSELKLCRNKLSALP 459

Query: 283 SDGFKDIPMLQILDLSYNIASLPEN----PPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
                 +P L+ LD   N     E      P  +  HL EL     +LR  P  +     
Sbjct: 460 LAALARVP-LKRLDCRENAIDRDEFLDAVSPLGA--HLTELDASSNRLRAVPRSVFACVA 516

Query: 339 LRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISAL---------------------- 375
           LR L L +N++   +  G+  L SL  LD++DN +++L                      
Sbjct: 517 LRSLRLPRNAIAGDLQRGWGALVSLETLDVADNRLTSLGDVHAAPRLRVLDLANNSIRNV 576

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
           PPELGL  P L+ L L GNP RS+R   L R T  VL  L+D++P N
Sbjct: 577 PPELGLC-PELRTLVLHGNPQRSVRAADLPRDTPKVLAKLRDRLPAN 622



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 76/141 (53%), Gaps = 1/141 (0%)

Query: 46  SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQL 104
           + L  LD   NR+ ++P S+  C +L    +  NA++  L    G L  L TLD+  N+L
Sbjct: 492 AHLTELDASSNRLRAVPRSVFACVALRSLRLPRNAIAGDLQRGWGALVSLETLDVADNRL 551

Query: 105 KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164
                     RL VLDL+NNS+  +PPE+G    LR L+L GNP R++R++ +   TP +
Sbjct: 552 TSLGDVHAAPRLRVLDLANNSIRNVPPELGLCPELRTLVLHGNPQRSVRAADLPRDTPKV 611

Query: 165 LKYLRSRLPENEDSEASTTKE 185
           L  LR RLP N    A +  E
Sbjct: 612 LAKLRDRLPANVGDRAPSPLE 632



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 112/290 (38%), Gaps = 86/290 (29%)

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           + WE  E+  LD + N   ELP +  S  +L+ L + +N++   P+ I   L +L  L  
Sbjct: 49  KFWEIVELRSLDATGNLFDELPGDWRSVGTLRQLRVGKNRLCALPEGIFADLPNLEVLDC 108

Query: 274 DNNPLRQVPSDGFK------------------------DIPMLQILDLSYNI--ASLP-- 305
            +N +R +P  GF+                         +  L+ LD+  N+    LP  
Sbjct: 109 GDNQIRHLP--GFQGCGASLKTLLAPRNRLQALDAGVLGLAALEALDVGGNVDLKCLPRL 166

Query: 306 ---------ENPPFSSLPHLQE----LYLRRMQLREAPTDILRLQQLRILDLSQNSLQ-- 350
                    EN   + +  L E    L L + +L E   D+   + L  LDL  N +   
Sbjct: 167 PERLQKVDAENCGLTVVDRLPEEARTLCLSKNRLSEG-VDVRHCRWLTYLDLRSNGMATY 225

Query: 351 SIPE---------GFKNLT---------SLTELDLSDNNISALPPELGLLE--------- 383
           +IP+         G   L          +L  +DL  N +  LPP LG            
Sbjct: 226 AIPDLPNLSHVFLGHNGLGDVALEKPSDALAHVDLGANRLRHLPPALGACGGLQSIDASN 285

Query: 384 -------------PSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
                        P L  L L+GNPLR++RR +L +G   +  YL+ + P
Sbjct: 286 NDLGEVPAALGYLPKLHRLSLEGNPLRTLRRDLLTQGCDRLKAYLRTRGP 335



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 106/281 (37%), Gaps = 47/281 (16%)

Query: 40  ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL-GKLSKLGTLD 98
           E    +  L  LD   N    +P       +L +  +G N L ALP  +   L  L  LD
Sbjct: 48  EKFWEIVELRSLDATGNLFDELPGDWRSVGTLRQLRVGKNRLCALPEGIFADLPNLEVLD 107

Query: 99  LHSNQLKEY-CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN------PLRT 151
              NQ++     + C   L  L    N L  L   +  +  L  L + GN      P   
Sbjct: 108 CGDNQIRHLPGFQGCGASLKTLLAPRNRLQALDAGVLGLAALEALDVGGNVDLKCLPRLP 167

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS----------VTSKEL 201
            R   V+     L   +  RLPE    EA T    L     RLS          +T  +L
Sbjct: 168 ERLQKVDAENCGL--TVVDRLPE----EART----LCLSKNRLSEGVDVRHCRWLTYLDL 217

Query: 202 SLEGMNLSAIP-----SEIW-------------EAGEITKLDLSRNSIQELPPELSSCAS 243
              GM   AIP     S ++              +  +  +DL  N ++ LPP L +C  
Sbjct: 218 RSNGMATYAIPDLPNLSHVFLGHNGLGDVALEKPSDALAHVDLGANRLRHLPPALGACGG 277

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           LQ++  S N + + P A L  L  L  L L+ NPLR +  D
Sbjct: 278 LQSIDASNNDLGEVP-AALGYLPKLHRLSLEGNPLRTLRRD 317


>gi|431908903|gb|ELK12494.1| Leucine-rich repeat and death domain-containing protein LOC401387
           [Pteropus alecto]
          Length = 827

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 187/404 (46%), Gaps = 47/404 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M +L +  NK+ V+S+  I ++  L  LI  KNLL  +PE I     L  L L  N++  
Sbjct: 356 MQELQLTDNKIEVISHK-IENFKELRILILDKNLLKEIPEKISHCVMLECLSLSDNKLTE 414

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P +I    SL + ++  N +  +P ++  L+ + +L+   N + +  +E    R ++ +
Sbjct: 415 LPKNIHKLKSLRKLHVNRNNIVRIPEDISYLNNMFSLEFSGNIITDVPIEIKNCRKITKV 474

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LS N +   P  +  + +L  L + GN +                    S +P     +
Sbjct: 475 KLSYNKIIHFPVGLCALDSLHYLNINGNYI--------------------SEVP----VD 510

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            S +K+ L             L      L      +    ++  LDL +N I+++P  +S
Sbjct: 511 ISFSKQLL------------HLEFNENKLLIFSEHLCSLIKLQYLDLGKNQIRKIPACIS 558

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           + ASL  LIL  NK + +P  + T L++L  L    N ++++PS+   ++  +Q L++S 
Sbjct: 559 NMASLHVLILCCNKFETFPIDVCT-LANLQVLDFSENQIKKIPSE-ICNLKGIQKLNISN 616

Query: 300 N-IASLPENPPFSSLPHLQELYLRRM---QLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           N     P       L  L+EL + ++   +L   P ++  + QL+ LD+S N+++ IP  
Sbjct: 617 NQFIYFP--IELCQLQSLEELNISQINGTKLTRLPEELFNMTQLKRLDISNNAIREIPRN 674

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
              L SL  L+  +N IS LPP    L   LQ L L GN L ++
Sbjct: 675 IGELKSLVSLNAYNNQISYLPPSFLSLN-DLQQLNLSGNNLTAL 717



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 174/428 (40%), Gaps = 75/428 (17%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L+  P  I  L  L  L++  N+I  IP  IS   ++ + ++ NN +   P+ L  L 
Sbjct: 203 NGLSTFPSEIQLLHNLKILNVSHNQISHIPKEISQLRNIRQLFLNNNYIENFPSGLESLR 262

Query: 93  KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL-----------------------SG 128
            L  L L  N L+      C L+ LSVL+L  N L                       S 
Sbjct: 263 NLEILSLAKNNLRYIPNTLCILKNLSVLNLEYNQLTIFPKVLCFLPKLISLNLTGNLISS 322

Query: 129 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL- 187
           LP EI ++  L KLL+  N L  L   +       LLK    +L +N+    S   E+  
Sbjct: 323 LPKEIRELKNLEKLLMDHNKLTFLPVEIF-----RLLKMQELQLTDNKIEVISHKIENFK 377

Query: 188 ------------------ITMATRLSVTS-------------------KELSLEGMNLSA 210
                             I+    L   S                   ++L +   N+  
Sbjct: 378 ELRILILDKNLLKEIPEKISHCVMLECLSLSDNKLTELPKNIHKLKSLRKLHVNRNNIVR 437

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           IP +I     +  L+ S N I ++P E+ +C  +  + LS NKI  +P   L +L SL  
Sbjct: 438 IPEDISYLNNMFSLEFSGNIITDVPIEIKNCRKITKVKLSYNKIIHFPVG-LCALDSLHY 496

Query: 271 LKLDNNPLRQVPSD-GFKDIPMLQILDLSYNIAS-LPENPPFSSLPHLQELYLRRMQLRE 328
           L ++ N + +VP D  F      Q+L L +N    L  +    SL  LQ L L + Q+R+
Sbjct: 497 LNINGNYISEVPVDISFSK----QLLHLEFNENKLLIFSEHLCSLIKLQYLDLGKNQIRK 552

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
            P  I  +  L +L L  N  ++ P     L +L  LD S+N I  +P E+  L+  +Q 
Sbjct: 553 IPACISNMASLHVLILCCNKFETFPIDVCTLANLQVLDFSENQIKKIPSEICNLK-GIQK 611

Query: 389 LRLDGNPL 396
           L +  N  
Sbjct: 612 LNISNNQF 619



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 159/351 (45%), Gaps = 43/351 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L L  N + + PS I    +L    + +N +S +P E+ +L  +  L L++N ++ +   
Sbjct: 198 LSLQDNGLSTFPSEIQLLHNLKILNVSHNQISHIPKEISQLRNIRQLFLNNNYIENFPSG 257

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
              LR L +L L+ N+L  +P  +  +  L  L L  N L            P +L +  
Sbjct: 258 LESLRNLEILSLAKNNLRYIPNTLCILKNLSVLNLEYNQLTIF---------PKVLCF-- 306

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
             LP+            LI+           L+L G  +S++P EI E   + KL +  N
Sbjct: 307 --LPK------------LIS-----------LNLTGNLISSLPKEIRELKNLEKLLMDHN 341

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP E+     +Q L L+ NKI+     I  +   L  L LD N L+++P +     
Sbjct: 342 KLTFLPVEIFRLLKMQELQLTDNKIEVISHKI-ENFKELRILILDKNLLKEIP-EKISHC 399

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
            ML+ L LS N +  LP+N     L  L++L++ R  +   P DI  L  +  L+ S N 
Sbjct: 400 VMLECLSLSDNKLTELPKN--IHKLKSLRKLHVNRNNIVRIPEDISYLNNMFSLEFSGNI 457

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           +  +P   KN   +T++ LS N I   P  L  L+ SL  L ++GN +  +
Sbjct: 458 ITDVPIEIKNCRKITKVKLSYNKIIHFPVGLCALD-SLHYLNINGNYISEV 507



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 128/283 (45%), Gaps = 36/283 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++ GN ++ +  ++  S  +L  L  ++N L    E + SL +L  LDL +N+I  
Sbjct: 494 LHYLNINGNYISEVPVDISFSKQLL-HLEFNENKLLIFSEHLCSLIKLQYLDLGKNQIRK 552

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           IP+ IS   SL    +  N     P ++  L+ L  LD   NQ+K+   E C L+ +  L
Sbjct: 553 IPACISNMASLHVLILCCNKFETFPIDVCTLANLQVLDFSENQIKKIPSEICNLKGIQKL 612

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           ++SNN     P E+ ++ +L +L +          S +NG          +RLP      
Sbjct: 613 NISNNQFIYFPIELCQLQSLEELNI----------SQINGTK-------LTRLP------ 649

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E+L  M T+L    K L +    +  IP  I E   +  L+   N I  LPP   
Sbjct: 650 -----EELFNM-TQL----KRLDISNNAIREIPRNIGELKSLVSLNAYNNQISYLPPSFL 699

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           S   LQ L LS N +   P  I  +L SL  +  D+NPL + P
Sbjct: 700 SLNDLQQLNLSGNNLTALPSGIY-NLFSLKDINFDDNPLLRPP 741



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 7/195 (3%)

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           ++L    +QE P ++     ++ L L  N+IK +  A    L+ L  L L +N L   PS
Sbjct: 151 VNLKAKGLQEFPKDILKIKYVKYLYLDENQIKSFEGAESCDLTGLEILSLQDNGLSTFPS 210

Query: 284 DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 342
           +  + +  L+IL++S+N I+ +P+    S L ++++L+L    +   P+ +  L+ L IL
Sbjct: 211 E-IQLLHNLKILNVSHNQISHIPK--EISQLRNIRQLFLNNNYIENFPSGLESLRNLEIL 267

Query: 343 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRT 402
            L++N+L+ IP     L +L+ L+L  N ++  P  L  L P L +L L GN + S+ + 
Sbjct: 268 SLAKNNLRYIPNTLCILKNLSVLNLEYNQLTIFPKVLCFL-PKLISLNLTGNLISSLPKE 326

Query: 403 ILDRGTKAVLKYLKD 417
           I  R  K + K L D
Sbjct: 327 I--RELKNLEKLLMD 339



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 124/269 (46%), Gaps = 23/269 (8%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L+   NKL + S +L  S   L  L   KN +  +P  I +++ L  L L  N+  + P 
Sbjct: 520 LEFNENKLLIFSEHL-CSLIKLQYLDLGKNQIRKIPACISNMASLHVLILCCNKFETFPI 578

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVL 119
            +    +L       N +  +P+E+  L  +  L++ +NQ   + +E CQL+    L++ 
Sbjct: 579 DVCTLANLQVLDFSENQIKKIPSEICNLKGIQKLNISNNQFIYFPIELCQLQSLEELNIS 638

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE-DS 178
            ++   L+ LP E+  MT L++L ++ N +R +         P  +  L+S +  N  ++
Sbjct: 639 QINGTKLTRLPEELFNMTQLKRLDISNNAIREI---------PRNIGELKSLVSLNAYNN 689

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           + S      +++        ++L+L G NL+A+PS I+    +  ++   N +  L P +
Sbjct: 690 QISYLPPSFLSLNDL-----QQLNLSGNNLTALPSGIYNLFSLKDINFDDNPL--LRPPM 742

Query: 239 SSCASLQTLILSRNKIK-DWPDAILTSLS 266
             C   Q   ++R   K D  D    SLS
Sbjct: 743 EICKGKQLYTIARYLQKADERDGSTVSLS 771


>gi|24650332|ref|NP_733154.1| scribbled, isoform A [Drosophila melanogaster]
 gi|386766560|ref|NP_001036761.3| scribbled, isoform B [Drosophila melanogaster]
 gi|23172362|gb|AAN14076.1| scribbled, isoform A [Drosophila melanogaster]
 gi|383292965|gb|ABI31210.3| scribbled, isoform B [Drosophila melanogaster]
          Length = 1756

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|54607112|ref|NP_067538.2| protein LAP2 isoform 2 [Mus musculus]
          Length = 1376

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        +E  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------REFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ  +LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDFLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLRSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   +  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L + + S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L  N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 117/250 (46%), Gaps = 24/250 (9%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 312
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRL 219

Query: 373 SALPPELGLL 382
           + +P  +G L
Sbjct: 220 TFIPGFIGSL 229



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 151/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLREFWMDGNRLTFIP--GFIGSLRQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+  L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N I
Sbjct: 252 CENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEI 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NMRTFAADHNYLQQL 337


>gi|7144483|gb|AAF26357.2| Scribble [Drosophila melanogaster]
          Length = 1756

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|390339446|ref|XP_003725006.1| PREDICTED: protein scribble homolog [Strongylocentrotus purpuratus]
          Length = 434

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 156/366 (42%), Gaps = 62/366 (16%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N L  +P  IG+   L+ LD+ +N I+ IP +I  C +L       N LS LP     
Sbjct: 34  SDNELERLPAEIGNFMNLLELDVSRNDIMEIPDNIKFCKALTIVDFSGNPLSRLPP---- 89

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
               G   LH               L  L L++ SL  LP +IG M+ L  + L  N L+
Sbjct: 90  ----GFTQLHD--------------LRHLTLNDVSLESLPQDIGSMSNLIAMELRENLLK 131

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
            L  SL       L+K     L  NE  E   T   L  ++        EL L+   L+ 
Sbjct: 132 VLPDSL-----SFLVKLETLDLGSNELEELPETLGALPNLS--------ELWLDCNQLTI 178

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +P EI   G +T LD+S N++Q LP E+    SL  L LS+N ++  P+ I   L  LS 
Sbjct: 179 LPPEIGNLGNLTCLDVSENNLQCLPDEIGGLQSLTDLTLSQNCLEKLPEGI-GKLKDLSI 237

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 330
           LK+D N L  +                          P   S  ++QEL L    L+E P
Sbjct: 238 LKIDQNRLITL-------------------------TPAIGSCENMQELILTENLLQEIP 272

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
             I  L+ L   ++ +N L  +P      T L  L L DN +  LPPELG L   L  L 
Sbjct: 273 PTIGSLRHLNNFNVDRNRLTQLPAQIGKCTRLGVLSLRDNRLLRLPPELGQLR-ELHVLD 331

Query: 391 LDGNPL 396
           + GN L
Sbjct: 332 VCGNRL 337



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 107/205 (52%), Gaps = 6/205 (2%)

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           EL +   ++  IP  I     +T +D S N +  LPP  +    L+ L L+   ++  P 
Sbjct: 53  ELDVSRNDIMEIPDNIKFCKALTIVDFSGNPLSRLPPGFTQLHDLRHLTLNDVSLESLPQ 112

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 318
            I  S+S+L  ++L  N L+ +P D    +  L+ LDL  N +  LPE     +LP+L E
Sbjct: 113 DI-GSMSNLIAMELRENLLKVLP-DSLSFLVKLETLDLGSNELEELPET--LGALPNLSE 168

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L+L   QL   P +I  L  L  LD+S+N+LQ +P+    L SLT+L LS N +  LP  
Sbjct: 169 LWLDCNQLTILPPEIGNLGNLTCLDVSENNLQCLPDEIGGLQSLTDLTLSQNCLEKLPEG 228

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTI 403
           +G L+  L  L++D N L ++   I
Sbjct: 229 IGKLK-DLSILKIDQNRLITLTPAI 252



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 112/249 (44%), Gaps = 15/249 (6%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P+ IGS+S LI ++L +N +  +P S+S    L    +G+N L  LP  LG L  L
Sbjct: 107 LESLPQDIGSMSNLIAMELRENLLKVLPDSLSFLVKLETLDLGSNELEELPETLGALPNL 166

Query: 95  GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L L  NQL     E   L  L+ LD+S N+L  LP EIG + +L  L L+ N L  L 
Sbjct: 167 SELWLDCNQLTILPPEIGNLGNLTCLDVSENNLQCLPDEIGGLQSLTDLTLSQNCLEKLP 226

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
             +      ++LK  ++RL               +T A       +EL L    L  IP 
Sbjct: 227 EGIGKLKDLSILKIDQNRLIT-------------LTPAIGSCENMQELILTENLLQEIPP 273

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
            I     +   ++ RN + +LP ++  C  L  L L  N++   P   L  L  L  L +
Sbjct: 274 TIGSLRHLNNFNVDRNRLTQLPAQIGKCTRLGVLSLRDNRLLRLPPE-LGQLRELHVLDV 332

Query: 274 DNNPLRQVP 282
             N L  +P
Sbjct: 333 CGNRLDWLP 341



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 2/165 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N L  L +  I     LT+L  S+N L  +PE IG L  L  L + QNR+++
Sbjct: 189 LTCLDVSENNLQCLPDE-IGGLQSLTDLTLSQNCLEKLPEGIGKLKDLSILKIDQNRLIT 247

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +  +I  C ++ E  +  N L  +P  +G L  L   ++  N+L +   +  +  RL VL
Sbjct: 248 LTPAIGSCENMQELILTENLLQEIPPTIGSLRHLNNFNVDRNRLTQLPAQIGKCTRLGVL 307

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164
            L +N L  LPPE+G++  L  L + GN L  L   L N    AL
Sbjct: 308 SLRDNRLLRLPPELGQLRELHVLDVCGNRLDWLPIQLANCNLKAL 352



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 26/253 (10%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I S + L  +   +NLL  +P+++  L +L  LDL  N +  +P ++    +L+E ++  
Sbjct: 114 IGSMSNLIAMELRENLLKVLPDSLSFLVKLETLDLGSNELEELPETLGALPNLSELWLDC 173

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LP E+G L  L  LD+  N L+    E   L+ L+ L LS N L  LP  IGK+ 
Sbjct: 174 NQLTILPPEIGNLGNLTCLDVSENNLQCLPDEIGGLQSLTDLTLSQNCLEKLPEGIGKLK 233

Query: 138 TLRKLLLTGNPLRTLRSSLVNG-----------------PTPALLKYLRSRLPENEDSEA 180
            L  L +  N L TL  ++ +                  PT   L++L +    N D   
Sbjct: 234 DLSILKIDQNRLITLTPAIGSCENMQELILTENLLQEIPPTIGSLRHLNNF---NVDRNR 290

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
            T     I   TRL V    LSL    L  +P E+ +  E+  LD+  N +  LP +L++
Sbjct: 291 LTQLPAQIGKCTRLGV----LSLRDNRLLRLPPELGQLRELHVLDVCGNRLDWLPIQLAN 346

Query: 241 CASLQTLILSRNK 253
           C +L+ L LS N+
Sbjct: 347 C-NLKALWLSENQ 358



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 1/125 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S L ++ N+L  L+   I S   + ELI ++NLL  +P TIGSL  L   ++ +NR+  
Sbjct: 235 LSILKIDQNRLITLTP-AIGSCENMQELILTENLLQEIPPTIGSLRHLNNFNVDRNRLTQ 293

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P+ I  C  L    + +N L  LP ELG+L +L  LD+  N+L    ++     L  L 
Sbjct: 294 LPAQIGKCTRLGVLSLRDNRLLRLPPELGQLRELHVLDVCGNRLDWLPIQLANCNLKALW 353

Query: 121 LSNNS 125
           LS N 
Sbjct: 354 LSENQ 358



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 1/94 (1%)

Query: 310 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
           F  L +L+ L L   +L   P +I     L  LD+S+N +  IP+  K   +LT +D S 
Sbjct: 22  FFRLTNLRILGLSDNELERLPAEIGNFMNLLELDVSRNDIMEIPDNIKFCKALTIVDFSG 81

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           N +S LPP    L   L+ L L+   L S+ + I
Sbjct: 82  NPLSRLPPGFTQLH-DLRHLTLNDVSLESLPQDI 114


>gi|418752849|ref|ZP_13309106.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966801|gb|EKO34641.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 398

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 109/320 (34%), Positives = 150/320 (46%), Gaps = 66/320 (20%)

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 136
           N+ L  LP E+GKL  L  LDL SNQL     E  +L+ L  LDLS+N L+ LP EIG++
Sbjct: 122 NDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQL 181

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             L+KL L  N L TL   + N      L+ L++                          
Sbjct: 182 QNLQKLNLNSNQLTTLSKEIGN------LQNLQT-------------------------- 209

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
               L L    L+ +P EIW    +  LDL RN +  LP E+ +  +LQTL L RN++  
Sbjct: 210 ----LDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTT 265

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
            P+ I                          ++  LQ LDL  N +A+LPE     +L +
Sbjct: 266 LPEEI-------------------------GNLQNLQTLDLEGNQLATLPE--EIGNLQN 298

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           LQ+L L   QL   P +I +LQ+L+ L L  N L ++P    NL  L  L L  N ++ L
Sbjct: 299 LQKLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPIEIGNLQKLQTLSLGHNQLTTL 358

Query: 376 PPELGLLEPSLQALRLDGNP 395
           P E+G L+  L+ L L GNP
Sbjct: 359 PKEIGNLQ-KLKMLDLGGNP 377



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 109/197 (55%), Gaps = 6/197 (3%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L  +P EI +   +  LDLS N +  LP E+    +LQ L LS N++   P  I   L +
Sbjct: 125 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEI-GQLQN 183

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L  L L++N L  + S    ++  LQ LDL  N + +LPE     +L +LQ L L R QL
Sbjct: 184 LQKLNLNSNQLTTL-SKEIGNLQNLQTLDLGRNQLTTLPE--EIWNLQNLQTLDLGRNQL 240

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
              P +I  LQ L+ LDL +N L ++PE   NL +L  LDL  N ++ LP E+G L+ +L
Sbjct: 241 TTLPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQ-NL 299

Query: 387 QALRLDGNPLRSIRRTI 403
           Q L L+GN L ++ + I
Sbjct: 300 QKLDLEGNQLTTLPKEI 316



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 129/264 (48%), Gaps = 16/264 (6%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ IG L  L  LDL  N+++++P  I    +L +  + +N L+ LP E+G+L  L  L
Sbjct: 128 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKL 187

Query: 98  DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           +L+SNQL     E   L+ L  LDL  N L+ LP EI  +  L+ L L  N L TL   +
Sbjct: 188 NLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEI 247

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
            N      L   R++L        +T  E++  +        + L LEG  L+ +P EI 
Sbjct: 248 WNLQNLQTLDLGRNQL--------TTLPEEIGNLQNL-----QTLDLEGNQLATLPEEIG 294

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
               + KLDL  N +  LP E+     L+ L L  N++   P  I  +L  L  L L +N
Sbjct: 295 NLQNLQKLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPIEI-GNLQKLQTLSLGHN 353

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN 300
            L  +P +   ++  L++LDL  N
Sbjct: 354 QLTTLPKE-IGNLQKLKMLDLGGN 376



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 128/260 (49%), Gaps = 15/260 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L +L  S N L  +P+ IG L  L +LDL  N++ ++P  I    +L +  + +
Sbjct: 132 IGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNS 191

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L+ L  E+G L  L TLDL  NQL     E   L+ L  LDL  N L+ LP EI  + 
Sbjct: 192 NQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQ 251

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L+ L L  N L TL   + N      L+ L++   + E ++ +T  E++  +       
Sbjct: 252 NLQTLDLGRNQLTTLPEEIGN------LQNLQTL--DLEGNQLATLPEEIGNLQNL---- 299

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            ++L LEG  L+ +P EI +  ++ KL L  N +  LP E+ +   LQTL L  N++   
Sbjct: 300 -QKLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPIEIGNLQKLQTLSLGHNQLTTL 358

Query: 258 PDAILTSLSSLSCLKLDNNP 277
           P  I  +L  L  L L  NP
Sbjct: 359 PKEI-GNLQKLKMLDLGGNP 377



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/153 (40%), Positives = 83/153 (54%), Gaps = 2/153 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL++  N+LT LS   I +   L  L   +N L  +PE I +L  L  LDL +N++ +
Sbjct: 184 LQKLNLNSNQLTTLSKE-IGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTT 242

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    +G N L+ LP E+G L  L TLDL  NQL     E   L+ L  L
Sbjct: 243 LPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQKL 302

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           DL  N L+ LP EIGK+  L+KL L  N L TL
Sbjct: 303 DLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTL 335



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 70/148 (47%), Gaps = 23/148 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N+LT L    I +   L  L    N L  +PE IG+L  L +LDL  N++ +
Sbjct: 253 LQTLDLGRNQLTTLPEE-IGNLQNLQTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLTT 311

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P  I     L + Y+ NN L+ LP E+G L KL TL L  NQ                 
Sbjct: 312 LPKEIGKLQKLKKLYLYNNRLTTLPIEIGNLQKLQTLSLGHNQ----------------- 354

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
                L+ LP EIG +  L+ L L GNP
Sbjct: 355 -----LTTLPKEIGNLQKLKMLDLGGNP 377


>gi|260787625|ref|XP_002588853.1| hypothetical protein BRAFLDRAFT_99565 [Branchiostoma floridae]
 gi|229274023|gb|EEN44864.1| hypothetical protein BRAFLDRAFT_99565 [Branchiostoma floridae]
          Length = 848

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 183/378 (48%), Gaps = 24/378 (6%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGT 96
           +P  I   + ++RLD   N I ++ S  S   SL   Y+  N +  LPA  L +L+ L  
Sbjct: 83  VPANIPLGTTVLRLD--HNNIQNL-SDFSYLISLERPYLYTNDIRGLPAGVLSQLTSLWW 139

Query: 97  LDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLR 153
           LDL  N + +    V +    L  L L +N ++ LP  +   +T+L+ L L+ N +  L 
Sbjct: 140 LDLSDNHIADLPDGVFSHLTSLRYLWLFDNHIAHLPEGVFSNLTSLQGLDLSDNHIADLP 199

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
             + +  T   L+YL        D+  +   E + +  T L    + L L   +++ +P 
Sbjct: 200 DGVFSHLTS--LRYLWLF-----DNHIAHLPEGVFSNLTSL----QGLDLSDNHIADLPD 248

Query: 214 EIWEA-GEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
            ++     +  L L  N I  LP    S+  SLQ L LS N I D PD + + L+SL  +
Sbjct: 249 GVFSHLTSLRYLWLFDNHIAHLPEGVFSNLTSLQGLDLSDNHIADLPDGVFSHLTSLKWI 308

Query: 272 KLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
           +L NN +  +P+  F  +  L+ L LS N IA LP+   FS L  L++LY+    +   P
Sbjct: 309 RLHNNNISSLPTGVFSHLTTLRDLYLSGNHIADLPDG-VFSHLTSLEQLYMFNNNITSLP 367

Query: 331 TDIL-RLQQLRILDLSQNSLQSIPEG-FKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
           T +   L  L+ L LS N +  +P+G F +LTSL  L LS+NNIS+LP  +      L  
Sbjct: 368 TGVFSHLTSLQGLSLSDNHIADLPDGVFSHLTSLEWLKLSNNNISSLPTGVFSHLTRLDE 427

Query: 389 LRLDGNPLRSIRRTILDR 406
           L LD N + S+   +   
Sbjct: 428 LNLDNNNISSLPTGVFSH 445



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 158/327 (48%), Gaps = 21/327 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS-LSRLIRLDLHQNRILSIP 62
           LD+  N +  L + + +  T L  L    N +  +PE + S L+ L  LDL  N I  +P
Sbjct: 140 LDLSDNHIADLPDGVFSHLTSLRYLWLFDNHIAHLPEGVFSNLTSLQGLDLSDNHIADLP 199

Query: 63  SSI-SGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSV 118
             + S   SL   ++ +N ++ LP      L+ L  LDL  N + +    V +    L  
Sbjct: 200 DGVFSHLTSLRYLWLFDNHIAHLPEGVFSNLTSLQGLDLSDNHIADLPDGVFSHLTSLRY 259

Query: 119 LDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
           L L +N ++ LP  +   +T+L+ L L+ N +  L   + +  T   LK++R  L  N  
Sbjct: 260 LWLFDNHIAHLPEGVFSNLTSLQGLDLSDNHIADLPDGVFSHLTS--LKWIR--LHNNNI 315

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPP 236
           S   T     +T       T ++L L G +++ +P  ++     + +L +  N+I  LP 
Sbjct: 316 SSLPTGVFSHLT-------TLRDLYLSGNHIADLPDGVFSHLTSLEQLYMFNNNITSLPT 368

Query: 237 E-LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
              S   SLQ L LS N I D PD + + L+SL  LKL NN +  +P+  F  +  L  L
Sbjct: 369 GVFSHLTSLQGLSLSDNHIADLPDGVFSHLTSLEWLKLSNNNISSLPTGVFSHLTRLDEL 428

Query: 296 DL-SYNIASLPENPPFSSLPHLQELYL 321
           +L + NI+SLP    FS L  LQELY+
Sbjct: 429 NLDNNNISSLPTGV-FSHLTSLQELYI 454


>gi|442621262|ref|NP_001262989.1| scribbled, isoform U [Drosophila melanogaster]
 gi|440217926|gb|AGB96369.1| scribbled, isoform U [Drosophila melanogaster]
          Length = 1766

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|195504035|ref|XP_002098907.1| GE23676 [Drosophila yakuba]
 gi|194185008|gb|EDW98619.1| GE23676 [Drosophila yakuba]
          Length = 1857

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 118/240 (49%), Gaps = 20/240 (8%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            L  L L  N L+ L  +L N        L +   S LP +            I   T+L
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------------IGQMTKL 315

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
           S     L+++   L  +P EI +   +  L L  N +++LPPEL +C  L  L +S N++
Sbjct: 316 S----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQL 371



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 SNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|414590313|tpg|DAA40884.1| TPA: putative leucine-rich repeat receptor-like protein kinase
           family protein [Zea mays]
          Length = 1207

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 189/398 (47%), Gaps = 60/398 (15%)

Query: 29  IASKNLLNGMPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALS-ALPA 86
           +AS NL   +P ++G L  L  L+L QN++   IP ++SG  SL    +  N LS A+P 
Sbjct: 175 LASCNLTGPIPTSLGRLGALTALNLQQNKLSGPIPRALSGLASLQVLALAGNQLSGAIPP 234

Query: 87  ELGKLSKLGTLDLHSNQLKEYC-VEACQL-RLSVLDLSNNSLSGLPPE-IGKMTTLRKLL 143
           ELG+++ L  L+L +N L      E   L  L  L+L NN LSGL P  +  ++ +R + 
Sbjct: 235 ELGRIAGLQKLNLGNNSLVGAIPPELGALGELQYLNLMNNRLSGLVPRALAAISRVRTID 294

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPE------NEDSEASTTKEDLITMATRLSVT 197
           L+GN        +++G  PA L     RLPE      +++    +   DL       + +
Sbjct: 295 LSGN--------MLSGALPAEL----GRLPELTFLVLSDNQLTGSVPGDLCGGDGAEASS 342

Query: 198 SKELSLEGMNLSA-IPSEIWEAGEITKLDLSRNSIQ------------------------ 232
            + L L   N +  IP  +     +T+LDL+ NS+                         
Sbjct: 343 LEHLMLSTNNFTGEIPEGLSRCRALTQLDLANNSLSGGIPAAIGELGNLTDLLLNNNSLS 402

Query: 233 -ELPPELSSCASLQTLILSRNKIKD-WPDAILTSLSSLSCLKL-DNNPLRQVPSDGFKDI 289
            ELPPEL + A LQTL L  NK+    PDAI   L +L  L L +N    ++P+    D 
Sbjct: 403 GELPPELFNLAELQTLALYHNKLTGRLPDAI-GRLGNLEVLYLYENQFAGEIPAS-IGDC 460

Query: 290 PMLQILDLSYNI--ASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQ 346
             LQ +D   N    S+P +    +L  L  L LR+  L    P ++   QQL I DL+ 
Sbjct: 461 ASLQQVDFFGNRFNGSIPAS--MGNLSQLIFLDLRQNDLSGVIPPELGECQQLEIFDLAD 518

Query: 347 NSLQ-SIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
           N+L  SIPE F  L SL +  L +N++S   P+ G+ E
Sbjct: 519 NALSGSIPETFGKLRSLEQFMLYNNSLSGAIPD-GMFE 555



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 185/455 (40%), Gaps = 88/455 (19%)

Query: 25  LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEF-YMGNNAL 81
           L  L    N L G +P+ IG L  L  L L++N+    IP+SI  C SL +  + GN   
Sbjct: 415 LQTLALYHNKLTGRLPDAIGRLGNLEVLYLYENQFAGEIPASIGDCASLQQVDFFGNRFN 474

Query: 82  SALPAELGKLSKLGTLDLHSNQLKEYC---VEACQLRLSVLDLSNNSLSGLPPE-IGKMT 137
            ++PA +G LS+L  LDL  N L       +  CQ +L + DL++N+LSG  PE  GK+ 
Sbjct: 475 GSIPASMGNLSQLIFLDLRQNDLSGVIPPELGECQ-QLEIFDLADNALSGSIPETFGKLR 533

Query: 138 TLRKLLLTGNPLRT---------------------LRSSLV------------------N 158
           +L + +L  N L                       L  SLV                  +
Sbjct: 534 SLEQFMLYNNSLSGAIPDGMFECRNITRVNIAHNRLSGSLVPLCGTARLLSFDATNNSFD 593

Query: 159 GPTPALLK----YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 214
           G  PA L       R RL  N  S         I   T L V+S EL+        IP+ 
Sbjct: 594 GRIPAQLGRSSSLQRVRLGSNMLSGPIPPSLGGIATLTLLDVSSNELT------GGIPAA 647

Query: 215 IWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           + +  +++ + LS N +   +P  L S   L  L LS N+        L++ S L  L L
Sbjct: 648 LAQCRQLSLIVLSHNRLSGAVPGWLGSLPQLGELALSNNEFTGAIPMQLSNCSELLKLSL 707

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR------ 327
           DNN +          +  L +L+L++N  S P     + L  L EL L +  L       
Sbjct: 708 DNNQINGTVPPELGGLVSLNVLNLAHNQLSGPIPTTVAKLSGLYELNLSQNYLSGPIPPD 767

Query: 328 --------------------EAPTDILRLQQLRILDLSQNSL-QSIPEGFKNLTSLTELD 366
                                 P  +  L +L  L+LS N+L  ++P     ++SL +LD
Sbjct: 768 IGKLQDLQSLLDLSSNNLSGHIPASLGSLPKLENLNLSHNALVGAVPSQLAGMSSLVQLD 827

Query: 367 LSDNNISA-LPPELGLLEPSLQA--LRLDGNPLRS 398
           LS N +   L  E G    +  A    L G+PLR 
Sbjct: 828 LSSNQLEGKLGTEFGRWPQAAFADNTGLCGSPLRG 862



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 128/301 (42%), Gaps = 47/301 (15%)

Query: 116 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR-TLRSSLVNGPTPALLKYLRSRLP 173
           L  +DLS+N+L+G +P  +G +  L+ LLL  N L   L +SLV     AL      RL 
Sbjct: 97  LEAIDLSSNALTGPVPAALGGLPNLQVLLLYSNQLAGVLPASLV-----ALSALQVLRLG 151

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-IPSEIWEAGEITKLDLSRNSIQ 232
           +N     S    D +     L+V    L L   NL+  IP+ +   G +T L+L +N + 
Sbjct: 152 DNPG--LSGAIPDALGRLANLTV----LGLASCNLTGPIPTSLGRLGALTALNLQQNKLS 205

Query: 233 -------------------------ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
                                     +PPEL   A LQ L L  N +       L +L  
Sbjct: 206 GPIPRALSGLASLQVLALAGNQLSGAIPPELGRIAGLQKLNLGNNSLVGAIPPELGALGE 265

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L  L L NN L  +       I  ++ +DLS N+ S         LP L  L L   QL 
Sbjct: 266 LQYLNLMNNRLSGLVPRALAAISRVRTIDLSGNMLSGALPAELGRLPELTFLVLSDNQLT 325

Query: 328 EA-PTDIL-----RLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNIS-ALPPEL 379
            + P D+          L  L LS N+    IPEG     +LT+LDL++N++S  +P  +
Sbjct: 326 GSVPGDLCGGDGAEASSLEHLMLSTNNFTGEIPEGLSRCRALTQLDLANNSLSGGIPAAI 385

Query: 380 G 380
           G
Sbjct: 386 G 386



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 74/139 (53%), Gaps = 8/139 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL-SI 61
           LDV  N+LT      +A    L+ ++ S N L+G +P  +GSL +L  L L  N    +I
Sbjct: 633 LDVSSNELTGGIPAALAQCRQLSLIVLSHNRLSGAVPGWLGSLPQLGELALSNNEFTGAI 692

Query: 62  PSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-- 118
           P  +S C  L +  + NN ++  +P ELG L  L  L+L  NQL    +     +LS   
Sbjct: 693 PMQLSNCSELLKLSLDNNQINGTVPPELGGLVSLNVLNLAHNQLSGP-IPTTVAKLSGLY 751

Query: 119 -LDLSNNSLSG-LPPEIGK 135
            L+LS N LSG +PP+IGK
Sbjct: 752 ELNLSQNYLSGPIPPDIGK 770


>gi|219519899|gb|AAI45499.1| Erbb2ip protein [Mus musculus]
          Length = 1411

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        +E  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------REFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ  +LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDFLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLRSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   +  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L + + S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L  N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 117/250 (46%), Gaps = 24/250 (9%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 312
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRL 219

Query: 373 SALPPELGLL 382
           + +P  +G L
Sbjct: 220 TFIPGFIGSL 229



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 151/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLREFWMDGNRLTFIP--GFIGSLRQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+  L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N I
Sbjct: 252 CENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEI 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NMRTFAADHNYLQQL 337


>gi|219520192|gb|AAI44076.1| ERBB2IP protein [Homo sapiens]
          Length = 1419

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 186/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N +  LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEVLPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N +  LP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEVLPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 24/251 (9%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 312
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRL 219

Query: 373 SALPPELGLLE 383
           + +P  +G L+
Sbjct: 220 TFIPGFIGSLK 230



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 151/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
             LP  +G L  +L+    D N L+ +
Sbjct: 312 EVLPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|60327198|gb|AAX19022.1| Hcr2-p1.2 [Solanum pimpinellifolium]
          Length = 991

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 207/433 (47%), Gaps = 39/433 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 59
           +S+LD+  NKL+      I     LT L   +N LNG +P ++G+L+ L  L L+ N++ 
Sbjct: 289 LSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLS 348

Query: 60  -SIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEAC-QLR- 115
            SIP  I    SL +  +GNN LS  +PA LGKL+   ++ L +NQL     E    LR 
Sbjct: 349 GSIPEEIGYLRSLTKLSLGNNFLSGSIPASLGKLNNFFSMHLFNNQLSGSIPEEIGYLRS 408

Query: 116 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRT----------------LRSSLVN 158
           L+ LDLS N+L+G +P  +G +  L  L L  N L                  L+ + +N
Sbjct: 409 LTYLDLSENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTYLDLKENALN 468

Query: 159 GPTPALLKYLR--SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
           G  PA L  L   SRL    +  + +  E++  +++  ++     SL G+    IP+   
Sbjct: 469 GSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLSSLTNLYLGNNSLNGL----IPASFG 524

Query: 217 EAGEITKLDLSRNS-IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
               +  L L+ N+ I E+P  + +  SL+ L + RN +K      L ++S L  L + +
Sbjct: 525 NMRNLQALFLNDNNLIGEIPSFVCNLTSLELLYMPRNNLKGKVPQCLGNISDLLVLSMSS 584

Query: 276 NPLR-QVPSDGFKDIPMLQILDLSYNI--ASLPENPPFSSLPHLQELYLRRMQLREA-PT 331
           N    ++PS    ++  L+ILD   N    ++P+   F ++  LQ   ++  +L    PT
Sbjct: 585 NSFSGELPSS-ISNLTSLKILDFGRNNLEGAIPQ--CFGNISSLQVFDMQNNKLSGTLPT 641

Query: 332 DILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNIS-ALPPELGLLEPSLQAL 389
           +      L  L+L  N L+  IP    N   L  LDL DN ++   P  LG L P L+ L
Sbjct: 642 NFSIGCSLISLNLHGNELEDEIPWSLDNCKKLQVLDLGDNQLNDTFPMWLGTL-PELRVL 700

Query: 390 RLDGNPLRSIRRT 402
           RL  N L    R+
Sbjct: 701 RLTSNKLHGPIRS 713



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 174/385 (45%), Gaps = 47/385 (12%)

Query: 25  LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALS 82
           LT+L    N L+G +  ++G L+ L  L L+ N++  SIP  I    SL +  +G N LS
Sbjct: 217 LTKLSLGINFLSGSIRASLGDLNNLSSLYLYHNQLSGSIPEEIGYLRSLTKLSLGINFLS 276

Query: 83  A-LPAELGKLSKLGTLDLHSNQLKEYCVEAC-QLR-LSVLDLSNNSLSG-LPPEIGKMTT 138
             +PA LG L+ L  LDL++N+L     E    LR L+ LDL  N+L+G +P  +G +  
Sbjct: 277 GSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNN 336

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L  L L  N L         G  P  + YLRS                     T+LS+ +
Sbjct: 337 LFMLYLYNNQLS--------GSIPEEIGYLRS--------------------LTKLSLGN 368

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDW 257
             LS       +IP+ + +      + L  N +   +P E+    SL  L LS N +   
Sbjct: 369 NFLS------GSIPASLGKLNNFFSMHLFNNQLSGSIPEEIGYLRSLTYLDLSENALNGS 422

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI--ASLPENPPFSSLPH 315
             A L +L++L  L L NN L     +    +  L  LDL  N    S+P +    +L +
Sbjct: 423 IPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTYLDLKENALNGSIPAS--LGNLNN 480

Query: 316 LQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNIS 373
           L  LYL   QL  + P +I  L  L  L L  NSL   IP  F N+ +L  L L+DNN+ 
Sbjct: 481 LSRLYLYNNQLSGSIPEEIGYLSSLTNLYLGNNSLNGLIPASFGNMRNLQALFLNDNNLI 540

Query: 374 ALPPELGLLEPSLQALRLDGNPLRS 398
              P       SL+ L +  N L+ 
Sbjct: 541 GEIPSFVCNLTSLELLYMPRNNLKG 565



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 183/417 (43%), Gaps = 64/417 (15%)

Query: 38  MPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLG 95
           +P  IG+L+ L+ LDL+ N+I  +IP  I     L    + NN L+  +P E+G L  L 
Sbjct: 111 IPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIGYLRSLT 170

Query: 96  TLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR-T 151
            L L  N L      +      LS L L NN LSG +P EIG + +L KL L  N L  +
Sbjct: 171 KLSLGINFLSGSIPASLGNLNNLSSLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLSGS 230

Query: 152 LRSSL---------------VNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMAT 192
           +R+SL               ++G  P  + YLRS     L  N  S +       +   +
Sbjct: 231 IRASLGDLNNLSSLYLYHNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLS 290

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-------------------- 232
           RL + + +LS       +IP EI     +T LDL  N++                     
Sbjct: 291 RLDLYNNKLS------GSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYN 344

Query: 233 -----ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
                 +P E+    SL  L L  N +     A L  L++   + L NN L     +   
Sbjct: 345 NQLSGSIPEEIGYLRSLTKLSLGNNFLSGSIPASLGKLNNFFSMHLFNNQLSGSIPEEIG 404

Query: 288 DIPMLQILDLSYNI--ASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDL 344
            +  L  LDLS N    S+P +    +L +L  LYL   QL  + P +I  L+ L  LDL
Sbjct: 405 YLRSLTYLDLSENALNGSIPAS--LGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTYLDL 462

Query: 345 SQNSLQ-SIPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGNPLRSI 399
            +N+L  SIP    NL +L+ L L +N +S  +P E+G L  SL  L L  N L  +
Sbjct: 463 KENALNGSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLS-SLTNLYLGNNSLNGL 518



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 157/366 (42%), Gaps = 48/366 (13%)

Query: 44  SLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHS 101
           SL  L  LDL  N I ++IP  I    +L    +  N +S  +P ++G L+KL  + + +
Sbjct: 93  SLPFLENLDLSNNNISVTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFN 152

Query: 102 NQLKEYCVEAC-QLR-LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
           N L  +  E    LR L+ L L  N LSG +P  +G +  L  L L  N L         
Sbjct: 153 NHLNGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSSLYLYNNQLS-------- 204

Query: 159 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 218
           G  P  + YLRS                     T+LS+    LS       +I + + + 
Sbjct: 205 GSIPEEIGYLRS--------------------LTKLSLGINFLS------GSIRASLGDL 238

Query: 219 GEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
             ++ L L  N +   +P E+    SL  L L  N +     A L +L++LS L L NN 
Sbjct: 239 NNLSSLYLYHNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSRLDLYNNK 298

Query: 278 LRQVPSDGFKDIPMLQILDLSYNI--ASLPENPPFSSLPHLQELYLRRMQLREA-PTDIL 334
           L     +    +  L  LDL  N    S+P +    +L +L  LYL   QL  + P +I 
Sbjct: 299 LSGSIPEEIGYLRSLTYLDLGENALNGSIPAS--LGNLNNLFMLYLYNNQLSGSIPEEIG 356

Query: 335 RLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLD 392
            L+ L  L L  N L  SIP     L +   + L +N +S  +P E+G L  SL  L L 
Sbjct: 357 YLRSLTKLSLGNNFLSGSIPASLGKLNNFFSMHLFNNQLSGSIPEEIGYLR-SLTYLDLS 415

Query: 393 GNPLRS 398
            N L  
Sbjct: 416 ENALNG 421



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 147/335 (43%), Gaps = 53/335 (15%)

Query: 31  SKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA-LPAE 87
           S N  +G +P +I +L+ L  LD  +N +  +IP       SL  F M NN LS  LP  
Sbjct: 583 SSNSFSGELPSSISNLTSLKILDFGRNNLEGAIPQCFGNISSLQVFDMQNNKLSGTLPTN 642

Query: 88  LGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLL 143
                 L +L+LH N+L++   + ++ C+ +L VLDL +N L+   P  +G +  LR L 
Sbjct: 643 FSIGCSLISLNLHGNELEDEIPWSLDNCK-KLQVLDLGDNQLNDTFPMWLGTLPELRVLR 701

Query: 144 LTGNPLRT-LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 202
           LT N L   +RSS V    P L     SR   ++D   S   E L  M T +  T +E S
Sbjct: 702 LTSNKLHGPIRSSGVEIMFPDLRIIDLSRNAFSQDLPTSLF-EHLKGMRT-VDKTMEEPS 759

Query: 203 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAI 261
            E    S +         +TK          L  E+    SL T+I LS NK +    ++
Sbjct: 760 YEIYYDSVVV--------VTK---------GLELEIVRILSLYTVIDLSSNKFEGHIPSV 802

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYL 321
           L  L ++  L + +N L+         + +L+ LDLS+N  S                  
Sbjct: 803 LGDLIAIRVLNVSHNALQGYIPSSLGSLSILESLDLSFNQLS------------------ 844

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQS-IPEG 355
                 E P  +  L  L  L+LS N LQ  IP+G
Sbjct: 845 -----GEIPQQLASLTFLEFLNLSHNYLQGCIPQG 874



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 72/154 (46%), Gaps = 12/154 (7%)

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDN----NPLRQVPSDGFKDIPMLQILDLSYNIASLP 305
           S N  KDW   +  +  S++ L + N      L   P   F  +P L+ LDLS N  S+ 
Sbjct: 55  SSNACKDWYGVVCFN-GSVNTLTITNASVIGTLYAFP---FSSLPFLENLDLSNNNISVT 110

Query: 306 ENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLT 363
             P   +L +L  L L   Q+    P  I  L +L+I+ +  N L   IPE    L SLT
Sbjct: 111 IPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIGYLRSLT 170

Query: 364 ELDLSDNNISA-LPPELGLLEPSLQALRLDGNPL 396
           +L L  N +S  +P  LG L  +L +L L  N L
Sbjct: 171 KLSLGINFLSGSIPASLGNLN-NLSSLYLYNNQL 203


>gi|148686562|gb|EDL18509.1| Erbb2 interacting protein [Mus musculus]
 gi|219519902|gb|AAI45510.1| Erbb2ip protein [Mus musculus]
          Length = 1402

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        +E  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------REFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ  +LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDFLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLRSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   +  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L + + S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L  N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 117/250 (46%), Gaps = 24/250 (9%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 312
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRL 219

Query: 373 SALPPELGLL 382
           + +P  +G L
Sbjct: 220 TFIPGFIGSL 229



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 151/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLREFWMDGNRLTFIP--GFIGSLRQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+  L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N I
Sbjct: 252 CENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEI 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NMRTFAADHNYLQQL 337


>gi|440789613|gb|ELR10919.1| SAM domain (Sterile alpha motif) domain containing protein
           [Acanthamoeba castellanii str. Neff]
          Length = 979

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 201/412 (48%), Gaps = 28/412 (6%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           N L  L N L    T LT L    N L  +P TI  L  L +L L  NR+  +P  I   
Sbjct: 572 NSLRTLPNEL-GQLTSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQLPEEIGCL 630

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-CVEA-CQLRLSVLDLSNNSL 126
            SL    + NN L  LP +L   + L  LD+ +N L ++  VE  CQL+   LDL  N L
Sbjct: 631 VSLEMLSVRNNQLHKLPRKLSMATNLKILDISTNHLTKFRSVEKLCQLK--DLDLKQNKL 688

Query: 127 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 186
           + LP   G +T L +L ++ N L     ++   P          RL E  D EA+     
Sbjct: 689 TTLPDGWGALTDLMRLDVSQNKLEEFPVTITELP----------RL-ETLDLEAN----Q 733

Query: 187 LITMATRL-SVTS-KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 244
           L  +A  + ++TS + L L    L A+P+E+     + +L L  N ++ +PPELS+  +L
Sbjct: 734 LTVLAPEIGNMTSLRSLYLGRNKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNL 793

Query: 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 303
           + L LS N+ + +PDA      +L+ L + +N ++++ S+    +  L+ L+L  N +  
Sbjct: 794 KHLDLSTNEFQTFPDARCFP-PALNSLNMSDNQMKRL-SNQIGALTTLKQLNLDENQLDR 851

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
           LP     S L  L EL +   +L   P +I  +  ++ L L  N +  +P+   NL++L 
Sbjct: 852 LPGE--ISLLTGLTELRVGYNELLTLPHEIGDISLIKQLHLEHNKMVELPKSIGNLSALE 909

Query: 364 ELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
              ++DN ++ LP E+  +  SL  L++DGNP  ++   +   G +    ++
Sbjct: 910 LFVVTDNLLNDLPNEMVNM-TSLSELKVDGNPFDNLPAAVRGAGGRDTYNFV 960



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 157/357 (43%), Gaps = 15/357 (4%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L  +P  +  +  L  L+L+ N+I S+P  +     L    +  N+L  LP ELG+L+ L
Sbjct: 528 LTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGLNENSLRTLPNELGQLTSL 587

Query: 95  GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDL  N+L E       L  L+ L L  N L  LP EIG + +L  L +  N L  L 
Sbjct: 588 TMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQLPEEIGCLVSLEMLSVRNNQLHKLP 647

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK---------ELSLE 204
             L       +L    + L +    E     +DL     +L+              L + 
Sbjct: 648 RKLSMATNLKILDISTNHLTKFRSVEKLCQLKDLDLKQNKLTTLPDGWGALTDLMRLDVS 707

Query: 205 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 264
              L   P  I E   +  LDL  N +  L PE+ +  SL++L L RNK+   P A L  
Sbjct: 708 QNKLEEFPVTITELPRLETLDLEANQLTVLAPEIGNMTSLRSLYLGRNKLIALP-AELGM 766

Query: 265 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRR 323
           L+ L  L L  N L+ +P +    +  L+ LDLS N   + P+   F   P L  L +  
Sbjct: 767 LTGLRELHLKGNRLKAIPPE-LSALVNLKHLDLSTNEFQTFPDARCFP--PALNSLNMSD 823

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
            Q++     I  L  L+ L+L +N L  +P     LT LTEL +  N +  LP E+G
Sbjct: 824 NQMKRLSNQIGALTTLKQLNLDENQLDRLPGEISLLTGLTELRVGYNELLTLPHEIG 880



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 105/212 (49%), Gaps = 28/212 (13%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           L+A+PS +WE   ++ L+L  N I+ LPP+L     L+ L L+ N ++  P+  L  L+S
Sbjct: 528 LTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGLNENSLRTLPNE-LGQLTS 586

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQL 326
           L+ L L  N L ++P+   K +  L  L L YN +  LPE      L  L+ L +R  QL
Sbjct: 587 LTMLDLRYNKLTELPAT-IKHLVHLNKLFLRYNRLEQLPEE--IGCLVSLEMLSVRNNQL 643

Query: 327 REAPTD----------------------ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
            + P                        + +L QL+ LDL QN L ++P+G+  LT L  
Sbjct: 644 HKLPRKLSMATNLKILDISTNHLTKFRSVEKLCQLKDLDLKQNKLTTLPDGWGALTDLMR 703

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           LD+S N +   P  +  L P L+ L L+ N L
Sbjct: 704 LDVSQNKLEEFPVTITEL-PRLETLDLEANQL 734



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 4/122 (3%)

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
           S+ E+    S   LQ   LRR +L   P+++  ++ L +L+L  N ++S+P     LT L
Sbjct: 505 SMAEDSGSGSAGGLQSYDLRRKELTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKL 564

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI--LDRGTKAVLKYLK-DKI 419
             L L++N++  LP ELG L  SL  L L  N L  +  TI  L    K  L+Y + +++
Sbjct: 565 KALGLNENSLRTLPNELGQL-TSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQL 623

Query: 420 PE 421
           PE
Sbjct: 624 PE 625


>gi|60327200|gb|AAX19023.1| Hcr2-p1.1 [Solanum pimpinellifolium]
          Length = 991

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 207/433 (47%), Gaps = 39/433 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 59
           +S+LD+  NKL+      I     LT L   +N LNG +P ++G+L+ L  L L+ N++ 
Sbjct: 289 LSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLS 348

Query: 60  -SIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEAC-QLR- 115
            SIP  I    SL +  +GNN LS  +PA LGKL+   ++ L +NQL     E    LR 
Sbjct: 349 GSIPEEIGYLRSLTKLSLGNNFLSGSIPASLGKLNNFFSMHLFNNQLSGSIPEEIGYLRS 408

Query: 116 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRT----------------LRSSLVN 158
           L+ LDLS N+L+G +P  +G +  L  L L  N L                  L+ + +N
Sbjct: 409 LTYLDLSENALNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTYLDLKENALN 468

Query: 159 GPTPALLKYLR--SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
           G  PA L  L   SRL    +  + +  E++  +++  ++     SL G+    IP+   
Sbjct: 469 GSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLSSLTNLYLGNNSLNGL----IPASFG 524

Query: 217 EAGEITKLDLSRNS-IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
               +  L L+ N+ I E+P  + +  SL+ L + RN +K      L ++S L  L + +
Sbjct: 525 NMRNLQALFLNDNNLIGEIPSFVCNLTSLELLYMPRNNLKGKVPQCLGNISDLLVLSMSS 584

Query: 276 NPLR-QVPSDGFKDIPMLQILDLSYNI--ASLPENPPFSSLPHLQELYLRRMQLREA-PT 331
           N    ++PS    ++  L+ILD   N    ++P+   F ++  LQ   ++  +L    PT
Sbjct: 585 NSFSGELPSS-ISNLTSLKILDFGRNNLEGAIPQ--CFGNISSLQVFDMQNNKLSGTLPT 641

Query: 332 DILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNIS-ALPPELGLLEPSLQAL 389
           +      L  L+L  N L+  IP    N   L  LDL DN ++   P  LG L P L+ L
Sbjct: 642 NFSIGCSLISLNLHGNELEDEIPWSLDNCKKLQVLDLGDNQLNDTFPMWLGTL-PELRVL 700

Query: 390 RLDGNPLRSIRRT 402
           RL  N L    R+
Sbjct: 701 RLTSNKLHGPIRS 713



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 174/385 (45%), Gaps = 47/385 (12%)

Query: 25  LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALS 82
           LT+L    N L+G +  ++G L+ L  L L+ N++  SIP  I    SL +  +G N LS
Sbjct: 217 LTKLSLGINFLSGSIRASLGDLNNLSSLYLYHNQLSGSIPEEIGYLRSLTKLSLGINFLS 276

Query: 83  A-LPAELGKLSKLGTLDLHSNQLKEYCVEAC-QLR-LSVLDLSNNSLSG-LPPEIGKMTT 138
             +PA LG L+ L  LDL++N+L     E    LR L+ LDL  N+L+G +P  +G +  
Sbjct: 277 GSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNN 336

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L  L L  N L         G  P  + YLRS                     T+LS+ +
Sbjct: 337 LFMLYLYNNQLS--------GSIPEEIGYLRS--------------------LTKLSLGN 368

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDW 257
             LS       +IP+ + +      + L  N +   +P E+    SL  L LS N +   
Sbjct: 369 NFLS------GSIPASLGKLNNFFSMHLFNNQLSGSIPEEIGYLRSLTYLDLSENALNGS 422

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI--ASLPENPPFSSLPH 315
             A L +L++L  L L NN L     +    +  L  LDL  N    S+P +    +L +
Sbjct: 423 IPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTYLDLKENALNGSIPAS--LGNLNN 480

Query: 316 LQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNIS 373
           L  LYL   QL  + P +I  L  L  L L  NSL   IP  F N+ +L  L L+DNN+ 
Sbjct: 481 LSRLYLYNNQLSGSIPEEIGYLSSLTNLYLGNNSLNGLIPASFGNMRNLQALFLNDNNLI 540

Query: 374 ALPPELGLLEPSLQALRLDGNPLRS 398
              P       SL+ L +  N L+ 
Sbjct: 541 GEIPSFVCNLTSLELLYMPRNNLKG 565



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 183/417 (43%), Gaps = 64/417 (15%)

Query: 38  MPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLG 95
           +P  IG+L+ L+ LDL+ N+I  +IP  I     L    + NN L+  +P E+G L  L 
Sbjct: 111 IPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIGYLRSLT 170

Query: 96  TLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR-T 151
            L L  N L      +      LS L L NN LSG +P EIG + +L KL L  N L  +
Sbjct: 171 KLSLGINFLSGSIPASLGNLNNLSSLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLSGS 230

Query: 152 LRSSL---------------VNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMAT 192
           +R+SL               ++G  P  + YLRS     L  N  S +       +   +
Sbjct: 231 IRASLGDLNNLSSLYLYHNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLS 290

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-------------------- 232
           RL + + +LS       +IP EI     +T LDL  N++                     
Sbjct: 291 RLDLYNNKLS------GSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYN 344

Query: 233 -----ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
                 +P E+    SL  L L  N +     A L  L++   + L NN L     +   
Sbjct: 345 NQLSGSIPEEIGYLRSLTKLSLGNNFLSGSIPASLGKLNNFFSMHLFNNQLSGSIPEEIG 404

Query: 288 DIPMLQILDLSYNI--ASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDL 344
            +  L  LDLS N    S+P +    +L +L  LYL   QL  + P +I  L+ L  LDL
Sbjct: 405 YLRSLTYLDLSENALNGSIPAS--LGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTYLDL 462

Query: 345 SQNSLQ-SIPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGNPLRSI 399
            +N+L  SIP    NL +L+ L L +N +S  +P E+G L  SL  L L  N L  +
Sbjct: 463 KENALNGSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLS-SLTNLYLGNNSLNGL 518



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 157/366 (42%), Gaps = 48/366 (13%)

Query: 44  SLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHS 101
           SL  L  LDL  N I ++IP  I    +L    +  N +S  +P ++G L+KL  + + +
Sbjct: 93  SLPFLENLDLSNNNISVTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFN 152

Query: 102 NQLKEYCVEAC-QLR-LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
           N L  +  E    LR L+ L L  N LSG +P  +G +  L  L L  N L         
Sbjct: 153 NHLNGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSSLYLYNNQLS-------- 204

Query: 159 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 218
           G  P  + YLRS                     T+LS+    LS       +I + + + 
Sbjct: 205 GSIPEEIGYLRS--------------------LTKLSLGINFLS------GSIRASLGDL 238

Query: 219 GEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
             ++ L L  N +   +P E+    SL  L L  N +     A L +L++LS L L NN 
Sbjct: 239 NNLSSLYLYHNQLSGSIPEEIGYLRSLTKLSLGINFLSGSIPASLGNLNNLSRLDLYNNK 298

Query: 278 LRQVPSDGFKDIPMLQILDLSYNI--ASLPENPPFSSLPHLQELYLRRMQLREA-PTDIL 334
           L     +    +  L  LDL  N    S+P +    +L +L  LYL   QL  + P +I 
Sbjct: 299 LSGSIPEEIGYLRSLTYLDLGENALNGSIPAS--LGNLNNLFMLYLYNNQLSGSIPEEIG 356

Query: 335 RLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLD 392
            L+ L  L L  N L  SIP     L +   + L +N +S  +P E+G L  SL  L L 
Sbjct: 357 YLRSLTKLSLGNNFLSGSIPASLGKLNNFFSMHLFNNQLSGSIPEEIGYLR-SLTYLDLS 415

Query: 393 GNPLRS 398
            N L  
Sbjct: 416 ENALNG 421



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 146/335 (43%), Gaps = 53/335 (15%)

Query: 31  SKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA-LPAE 87
           S N  +G +P +I +L+ L  LD  +N +  +IP       SL  F M NN LS  LP  
Sbjct: 583 SSNSFSGELPSSISNLTSLKILDFGRNNLEGAIPQCFGNISSLQVFDMQNNKLSGTLPTN 642

Query: 88  LGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLL 143
                 L +L+LH N+L++   + ++ C+ +L VLDL +N L+   P  +G +  LR L 
Sbjct: 643 FSIGCSLISLNLHGNELEDEIPWSLDNCK-KLQVLDLGDNQLNDTFPMWLGTLPELRVLR 701

Query: 144 LTGNPLRT-LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 202
           LT N L   +RSS      P L     SR   ++D   S   E L  M T +  T +E S
Sbjct: 702 LTSNKLHGPIRSSGAEIMFPDLRIIDLSRNAFSQDLPTSLF-EHLKGMRT-VDKTMEEPS 759

Query: 203 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIKDWPDAI 261
            E    S +         +TK          L  E+    SL T+I LS NK +    ++
Sbjct: 760 YEIYYDSVVV--------VTK---------GLELEIVRILSLYTVIDLSSNKFEGHIPSV 802

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYL 321
           L  L ++  L + +N L+         + +L+ LDLS+N  S                  
Sbjct: 803 LGDLIAIRVLNVSHNALQGYIPSSLGSLSILESLDLSFNQLS------------------ 844

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQS-IPEG 355
                 E P  +  L  L  L+LS N LQ  IP+G
Sbjct: 845 -----GEIPQQLASLTFLEFLNLSHNYLQGCIPQG 874



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 72/154 (46%), Gaps = 12/154 (7%)

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDN----NPLRQVPSDGFKDIPMLQILDLSYNIASLP 305
           S N  KDW   +  +  S++ L + N      L   P   F  +P L+ LDLS N  S+ 
Sbjct: 55  SSNACKDWYGVVCFN-GSVNTLTITNASVIGTLYAFP---FSSLPFLENLDLSNNNISVT 110

Query: 306 ENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLT 363
             P   +L +L  L L   Q+    P  I  L +L+I+ +  N L   IPE    L SLT
Sbjct: 111 IPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIGYLRSLT 170

Query: 364 ELDLSDNNISA-LPPELGLLEPSLQALRLDGNPL 396
           +L L  N +S  +P  LG L  +L +L L  N L
Sbjct: 171 KLSLGINFLSGSIPASLGNLN-NLSSLYLYNNQL 203


>gi|357614953|gb|EHJ69388.1| hypothetical protein KGM_05974 [Danaus plexippus]
          Length = 710

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 165/349 (47%), Gaps = 48/349 (13%)

Query: 65  ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 123
           IS    L+ FY+ +     +P ++ KL  L   D  SN +        QLR L+VL L++
Sbjct: 5   ISEIFKLSGFYIPD-----IPEDIKKLRALQIADFSSNPIPRLPAGFSQLRALTVLGLND 59

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
            SL+ LP + G + +L+ L L  N L++L  SL N     L K  R  L +NE       
Sbjct: 60  MSLTSLPSDFGSLISLQSLELRENLLKSLPESLKN-----LTKLERLDLGDNE------- 107

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
                                   +  +P  I E   + +L L  N +Q LP E+ +  +
Sbjct: 108 ------------------------IEELPGFIGELPALQELWLDHNKLQNLPSEIGNLKA 143

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IA 302
           L  L +S NK++  P+ I   LSSL+ L L  N L  VP +G  D+  L IL L  N + 
Sbjct: 144 LICLDVSENKLERIPEDI-GGLSSLTDLHLSQNMLETVP-NGIGDLSKLAILKLDQNRLH 201

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
           +L EN        LQEL L    L E P  I  L +L +L++ +NSL  IP    N+T L
Sbjct: 202 TLNEN--VGRCTSLQELILTENFLTELPKSIGNLNELTVLNVDRNSLGDIPLEIGNMTLL 259

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L L DN ++ LP ELG  + SL  L + GN L+ +  T+++   KAV
Sbjct: 260 GVLSLRDNKLTKLPNELGNCK-SLHVLDVSGNRLQYLPYTLVNLELKAV 307



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 89/156 (57%), Gaps = 2/156 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  NKL  +  + I   + LT+L  S+N+L  +P  IG LS+L  L L QNR+ ++  
Sbjct: 147 LDVSENKLERIPED-IGGLSSLTDLHLSQNMLETVPNGIGDLSKLAILKLDQNRLHTLNE 205

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           ++  C SL E  +  N L+ LP  +G L++L  L++  N L +  +E   +  L VL L 
Sbjct: 206 NVGRCTSLQELILTENFLTELPKSIGNLNELTVLNVDRNSLGDIPLEIGNMTLLGVLSLR 265

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
           +N L+ LP E+G   +L  L ++GN L+ L  +LVN
Sbjct: 266 DNKLTKLPNELGNCKSLHVLDVSGNRLQYLPYTLVN 301



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 109/210 (51%), Gaps = 6/210 (2%)

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
           ++ S+   L G  +  IP +I +   +   D S N I  LP   S   +L  L L+   +
Sbjct: 3   TLISEIFKLSGFYIPDIPEDIKKLRALQIADFSSNPIPRLPAGFSQLRALTVLGLNDMSL 62

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPF-SSL 313
              P +   SL SL  L+L  N L+ +P +  K++  L+ LDL  N   + E P F   L
Sbjct: 63  TSLP-SDFGSLISLQSLELRENLLKSLP-ESLKNLTKLERLDLGDN--EIEELPGFIGEL 118

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
           P LQEL+L   +L+  P++I  L+ L  LD+S+N L+ IPE    L+SLT+L LS N + 
Sbjct: 119 PALQELWLDHNKLQNLPSEIGNLKALICLDVSENKLERIPEDIGGLSSLTDLHLSQNMLE 178

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            +P  +G L   L  L+LD N L ++   +
Sbjct: 179 TVPNGIGDLS-KLAILKLDQNRLHTLNENV 207



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 123/252 (48%), Gaps = 38/252 (15%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           +NLL  +PE++ +L++L RLDL  N I  +P  I    +L E ++ +N L  LP+E+G L
Sbjct: 82  ENLLKSLPESLKNLTKLERLDLGDNEIEELPGFIGELPALQELWLDHNKLQNLPSEIGNL 141

Query: 92  SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
             L             C          LD+S N L  +P +IG +++L  L L+ N L T
Sbjct: 142 KAL------------IC----------LDVSENKLERIPEDIGGLSSLTDLHLSQNMLET 179

Query: 152 LRSSLVNGPTPALLKYLRSRLPE-NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
           + + + +    A+LK  ++RL   NE+    T+ ++LI              L    L+ 
Sbjct: 180 VPNGIGDLSKLAILKLDQNRLHTLNENVGRCTSLQELI--------------LTENFLTE 225

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +P  I    E+T L++ RNS+ ++P E+ +   L  L L  NK+   P+  L +  SL  
Sbjct: 226 LPKSIGNLNELTVLNVDRNSLGDIPLEIGNMTLLGVLSLRDNKLTKLPNE-LGNCKSLHV 284

Query: 271 LKLDNNPLRQVP 282
           L +  N L+ +P
Sbjct: 285 LDVSGNRLQYLP 296



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 88/196 (44%), Gaps = 25/196 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N++  L    I     L EL    N L  +P  IG+L  LI LD+ +N++  
Sbjct: 98  LERLDLGDNEIEELPG-FIGELPALQELWLDHNKLQNLPSEIGNLKALICLDVSENKLER 156

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------YCVEACQL 114
           IP  I G  SL + ++  N L  +P  +G LSKL  L L  N+L         C    +L
Sbjct: 157 IPEDIGGLSSLTDLHLSQNMLETVPNGIGDLSKLAILKLDQNRLHTLNENVGRCTSLQEL 216

Query: 115 ------------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
                              L+VL++  NSL  +P EIG MT L  L L  N L  L + L
Sbjct: 217 ILTENFLTELPKSIGNLNELTVLNVDRNSLGDIPLEIGNMTLLGVLSLRDNKLTKLPNEL 276

Query: 157 VNGPTPALLKYLRSRL 172
            N  +  +L    +RL
Sbjct: 277 GNCKSLHVLDVSGNRL 292



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 145/346 (41%), Gaps = 64/346 (18%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S N +  +P     L  L  L L+   + S+PS      SL    +  N L +LP  L  
Sbjct: 35  SSNPIPRLPAGFSQLRALTVLGLNDMSLTSLPSDFGSLISLQSLELRENLLKSLPESLKN 94

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L+KL  LDL  N+++E      +L  L  L L +N L  LP EIG +  L  L ++ N L
Sbjct: 95  LTKLERLDLGDNEIEELPGFIGELPALQELWLDHNKLQNLPSEIGNLKALICLDVSENKL 154

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
                                R+PE+    +S T                +L L    L 
Sbjct: 155 --------------------ERIPEDIGGLSSLT----------------DLHLSQNMLE 178

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P+ I +  ++  L L +N +  L   +  C SLQ LIL+ N + + P +I  +L+ L+
Sbjct: 179 TVPNGIGDLSKLAILKLDQNRLHTLNENVGRCTSLQELILTENFLTELPKSI-GNLNELT 237

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 329
            L +D N L  +P         L+I +++                 L  L LR  +L + 
Sbjct: 238 VLNVDRNSLGDIP---------LEIGNMTL----------------LGVLSLRDNKLTKL 272

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           P ++   + L +LD+S N LQ +P    NL  L  + LS+N    L
Sbjct: 273 PNELGNCKSLHVLDVSGNRLQYLPYTLVNL-ELKAVWLSENQAQPL 317



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L+ N +   T L ELI ++N L  +P++IG+L+ L  L++ +N +  IP 
Sbjct: 193 LKLDQNRLHTLNEN-VGRCTSLQELILTENFLTELPKSIGNLNELTVLNVDRNSLGDIPL 251

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I     L    + +N L+ LP ELG    L  LD+  N+L+        L L  + LS 
Sbjct: 252 EIGNMTLLGVLSLRDNKLTKLPNELGNCKSLHVLDVSGNRLQYLPYTLVNLELKAVWLSE 311

Query: 124 N 124
           N
Sbjct: 312 N 312


>gi|341940994|sp|Q80TH2.3|LAP2_MOUSE RecName: Full=Protein LAP2; AltName: Full=Densin-180-like protein;
           AltName: Full=Erbb2-interacting protein; Short=Erbin
          Length = 1402

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        +E  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------REFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ  +LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDFLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLRSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   +  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L + + S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L  N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 117/250 (46%), Gaps = 24/250 (9%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 312
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRL 219

Query: 373 SALPPELGLL 382
           + +P  +G L
Sbjct: 220 TFIPGFIGSL 229



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 151/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLREFWMDGNRLTFIP--GFIGSLRQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+  L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N I
Sbjct: 252 CENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEI 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NMRTFAADHNYLQQL 337


>gi|54607114|ref|NP_001005868.1| protein LAP2 isoform 1 [Mus musculus]
 gi|187954753|gb|AAI41189.1| Erbb2 interacting protein [Mus musculus]
          Length = 1450

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        +E  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------REFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ  +LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDFLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLRSIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   +  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L + + S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L  N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 117/250 (46%), Gaps = 24/250 (9%)

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MTT R L +   P R LR       T   L Y    L +          +++ T    L 
Sbjct: 1   MTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL- 48

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I+
Sbjct: 49  ---EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQ 105

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSS 312
           ++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  
Sbjct: 106 EFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGR 159

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N +
Sbjct: 160 LTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRL 219

Query: 373 SALPPELGLL 382
           + +P  +G L
Sbjct: 220 TFIPGFIGSL 229



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 151/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLREFWMDGNRLTFIP--GFIGSLRQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+  L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N I
Sbjct: 252 CENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEI 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 312 EALPSSIGQLT-NMRTFAADHNYLQQL 337


>gi|116007092|ref|NP_001014670.2| scribbled, isoform H [Drosophila melanogaster]
 gi|113194844|gb|AAX52995.2| scribbled, isoform H [Drosophila melanogaster]
          Length = 1939

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|449678883|ref|XP_002165472.2| PREDICTED: protein scribble homolog, partial [Hydra magnipapillata]
          Length = 432

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 171/400 (42%), Gaps = 65/400 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +EGN+LT L    I   T L  LI + N +  +   I SL  L  LD  +N +  
Sbjct: 44  LEELSLEGNQLTDLPKG-IFRMTKLRRLILADNEIQDLTNDISSLIALEELDFSKNDVRV 102

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P SI  C  L    + +N L  LP  L KL          NQLK +             
Sbjct: 103 VPDSIQNCKKLTFLDISSNTLGELPDSLTKL----------NQLKTW------------- 139

Query: 121 LSNN-SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           ++N+ +L+ +PPEIG ++ L  L L  N ++ L  S        L K  R  L  NE  E
Sbjct: 140 IANDIALTEIPPEIGSLSNLVVLELRENCIKFLPLSF-----SFLSKLERLDLGGNELEE 194

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
              T   L  +         EL L+   L+ +PSEI E   +  LD+S N I+ELP E+S
Sbjct: 195 LPDTIGQLTCLI--------ELWLDNNFLTTLPSEIGELKALQCLDVSENRIEELPEEIS 246

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  SL  L  + N + + P  I   L  L  LK+D N + ++                  
Sbjct: 247 TLTSLTDLHCTSNALHELPQGI-GCLIKLQILKVDQNEIDEITD---------------- 289

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                          +L E+ L    +   P  I +L  L +L++ +N L + P    N 
Sbjct: 290 ---------CIGGCTNLLEVVLSENVIEFLPAAIGKLSNLTLLNIDRNRLFTFPPEIGNC 340

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           T L+ L   DN I  +P E+G  + SL  L L GN L S+
Sbjct: 341 TKLSVLSARDNQIVKIPKEIGSCK-SLTVLSLSGNKLESL 379



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 162/360 (45%), Gaps = 41/360 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N++  L+N+ I+S   L EL  SKN +  +P++I +  +L  LD+  N +  
Sbjct: 67  LRRLILADNEIQDLTND-ISSLIALEELDFSKNDVRVVPDSIQNCKKLTFLDISSNTLGE 125

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S++    L  +   + AL+ +P E+G LS L  L+L  N +K   +    L +L  L
Sbjct: 126 LPDSLTKLNQLKTWIANDIALTEIPPEIGSLSNLVVLELRENCIKFLPLSFSFLSKLERL 185

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL  N L  LP  IG++T L +L L  N L TL S +        L    +R+ E  + E
Sbjct: 186 DLGGNELEELPDTIGQLTCLIELWLDNNFLTTLPSEIGELKALQCLDVSENRIEELPE-E 244

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            ST     +T  T L  TS         L  +P  I    ++  L + +N I E+   + 
Sbjct: 245 IST-----LTSLTDLHCTSNA-------LHELPQGIGCLIKLQILKVDQNEIDEITDCIG 292

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C +L  ++LS N I+  P AI   LS+L+ L +D N L   P                 
Sbjct: 293 GCTNLLEVVLSENVIEFLPAAI-GKLSNLTLLNIDRNRLFTFP----------------- 334

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                   P   +   L  L  R  Q+ + P +I   + L +L LS N L+S+P     L
Sbjct: 335 --------PEIGNCTKLSVLSARDNQIVKIPKEIGSCKSLTVLSLSGNKLESLPFAVSTL 386



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 142/290 (48%), Gaps = 20/290 (6%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           L  LD S+ SL+ +  +I +   TL +L L GN L  L   +       + K  R  L +
Sbjct: 20  LDYLDKSHCSLTTVTEDILRHAGTLEELSLEGNQLTDLPKGIFR-----MTKLRRLILAD 74

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
           NE  + +     LI +        +EL     ++  +P  I    ++T LD+S N++ EL
Sbjct: 75  NEIQDLTNDISSLIAL--------EELDFSKNDVRVVPDSIQNCKKLTFLDISSNTLGEL 126

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P  L+    L+T I +   + + P  I  SLS+L  L+L  N ++ +P   F  +  L+ 
Sbjct: 127 PDSLTKLNQLKTWIANDIALTEIPPEI-GSLSNLVVLELRENCIKFLPL-SFSFLSKLER 184

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           LDL  N +  LP+      L  L EL+L    L   P++I  L+ L+ LD+S+N ++ +P
Sbjct: 185 LDLGGNELEELPDT--IGQLTCLIELWLDNNFLTTLPSEIGELKALQCLDVSENRIEELP 242

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           E    LTSLT+L  + N +  LP  +G L   LQ L++D N +  I   I
Sbjct: 243 EEISTLTSLTDLHCTSNALHELPQGIGCL-IKLQILKVDQNEIDEITDCI 291



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 114/255 (44%), Gaps = 41/255 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+ GN+L  L +  I   T L EL    N L  +P  IG L  L  LD+ +NRI  
Sbjct: 182 LERLDLGGNELEELPDT-IGQLTCLIELWLDNNFLTTLPSEIGELKALQCLDVSENRIEE 240

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSV 118
           +P  IS   SL + +  +NAL  LP  +G L KL  L +  N++ E   C+  C   L V
Sbjct: 241 LPEEISTLTSLTDLHCTSNALHELPQGIGCLIKLQILKVDQNEIDEITDCIGGCTNLLEV 300

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           + LS N +  LP  IGK++ L  L +  N L T    + N                    
Sbjct: 301 V-LSENVIEFLPAAIGKLSNLTLLNIDRNRLFTFPPEIGN-------------------- 339

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                        T+LSV    LS     +  IP EI     +T L LS N ++ LP  +
Sbjct: 340 ------------CTKLSV----LSARDNQIVKIPKEIGSCKSLTVLSLSGNKLESLPFAV 383

Query: 239 SSCASLQTLILSRNK 253
           S+   L+ L LS+N+
Sbjct: 384 ST-LPLKALWLSQNQ 397


>gi|429962677|gb|ELA42221.1| hypothetical protein VICG_00620, partial [Vittaforma corneae ATCC
           50505]
          Length = 633

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 150/309 (48%), Gaps = 40/309 (12%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           ++L  LDLS N+L  LPPEIG++  L+ L L GN LRTL S +        L++L  R  
Sbjct: 67  VKLEKLDLSFNNLETLPPEIGELKNLQHLGLYGNRLRTLPSEVEELKN---LQHLDLRYN 123

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
           E          E   T+  +L    + L L G      P EI E  ++ +L+L  N ++ 
Sbjct: 124 E---------FESFPTVIRKLKNLER-LILNGNKFGLFPIEIAELKKLQRLELHDNKLKL 173

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK------ 287
           LP E+     LQTL L  N+ + +P  ++  L +L  L L  N L  +P +  K      
Sbjct: 174 LPDEIGGMKELQTLYLGYNEFESFP-TVIVKLKNLQHLFLGGNKLETLPVEIVKLKSLQK 232

Query: 288 ----------------DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
                           ++  L+IL+LS N + +LP+      L +LQELYL + +    P
Sbjct: 233 LNLLKNRFEIFPNVVGELENLKILNLSNNKLETLPD--TIGELENLQELYLLKNRFEIFP 290

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
             +  L+ L+IL+LS N L+ +P     L +L  L L +N +  LP  +G L+ +L+ L 
Sbjct: 291 NVVGELENLKILNLSNNKLKILPSEIGKLENLQHLLLINNKLETLPAAIGELQ-NLRELN 349

Query: 391 LDGNPLRSI 399
           L GN L ++
Sbjct: 350 LGGNKLETL 358



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 150/377 (39%), Gaps = 65/377 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+  N L  L    I     L  L    N L  +P  +  L  L  LDL  N   S
Sbjct: 69  LEKLDLSFNNLETLPPE-IGELKNLQHLGLYGNRLRTLPSEVEELKNLQHLDLRYNEFES 127

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
            P+ I    +L    +  N     P E+ +L KL  L+LH N+LK    E   ++ L  L
Sbjct: 128 FPTVIRKLKNLERLILNGNKFGLFPIEIAELKKLQRLELHDNKLKLLPDEIGGMKELQTL 187

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N     P  I K+  L+ L L GN L TL   +V   +   L  L++R        
Sbjct: 188 YLGYNEFESFPTVIVKLKNLQHLFLGGNKLETLPVEIVKLKSLQKLNLLKNR-------- 239

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                           P+ + E   +  L+LS N ++ LP  + 
Sbjct: 240 ----------------------------FEIFPNVVGELENLKILNLSNNKLETLPDTIG 271

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +LQ L L +N+ + +P+ ++  L +L  L L NN L+ +PS+               
Sbjct: 272 ELENLQELYLLKNRFEIFPN-VVGELENLKILNLSNNKLKILPSE--------------- 315

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                        L +LQ L L   +L   P  I  LQ LR L+L  N L+++P   + L
Sbjct: 316 ----------IGKLENLQHLLLINNKLETLPAAIGELQNLRELNLGGNKLETLPIEIEKL 365

Query: 360 T-SLTELDLSDNNISAL 375
             SL  L+L  NNIS +
Sbjct: 366 AGSLRLLNLRGNNISEV 382



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 180/399 (45%), Gaps = 46/399 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           +TE+   +  +  +   +G L +L +LDL  N + ++P  I    +L    +  N L  L
Sbjct: 46  VTEISICRQGIRFIGSDVGRLVKLEKLDLSFNNLETLPPEIGELKNLQHLGLYGNRLRTL 105

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P+E+ +L  L  LDL  N+ + +     +L+ L  L L+ N     P EI ++  L++L 
Sbjct: 106 PSEVEELKNLQHLDLRYNEFESFPTVIRKLKNLERLILNGNKFGLFPIEIAELKKLQRLE 165

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+                     LP+    E    KE             + L L
Sbjct: 166 LHDNKLKL--------------------LPD----EIGGMKE------------LQTLYL 189

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
                 + P+ I +   +  L L  N ++ LP E+    SLQ L L +N+ + +P+ ++ 
Sbjct: 190 GYNEFESFPTVIVKLKNLQHLFLGGNKLETLPVEIVKLKSLQKLNLLKNRFEIFPN-VVG 248

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            L +L  L L NN L  +P D   ++  LQ L L  N   +  N     L +L+ L L  
Sbjct: 249 ELENLKILNLSNNKLETLP-DTIGELENLQELYLLKNRFEIFPN-VVGELENLKILNLSN 306

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            +L+  P++I +L+ L+ L L  N L+++P     L +L EL+L  N +  LP E+  L 
Sbjct: 307 NKLKILPSEIGKLENLQHLLLINNKLETLPAAIGELQNLRELNLGGNKLETLPIEIEKLA 366

Query: 384 PSLQALRLDGNPLRSI---RRTILDRGTKAVLKYLKDKI 419
            SL+ L L GN +  +    RT+   G + + +   D++
Sbjct: 367 GSLRLLNLRGNNISEVGDGERTV---GWRELREIFGDRV 402



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%)

Query: 298 SYNIASLPENPPFSSLP-HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
           S N A+  E   F   P  + E+ + R  +R   +D+ RL +L  LDLS N+L+++P   
Sbjct: 27  SDNGANPSEIYSFDEYPVDVTEISICRQGIRFIGSDVGRLVKLEKLDLSFNNLETLPPEI 86

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
             L +L  L L  N +  LP E+  L+ +LQ L L  N   S 
Sbjct: 87  GELKNLQHLGLYGNRLRTLPSEVEELK-NLQHLDLRYNEFESF 128


>gi|418721889|ref|ZP_13281061.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410741686|gb|EKQ90441.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 351

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 144/296 (48%), Gaps = 21/296 (7%)

Query: 4   LDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 61
           LD+   KLT+L   +   W +  L EL    N L  +P+ IG L  L  L L+ N++  +
Sbjct: 26  LDLREQKLTILPKEI---WQLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYANQLTIL 82

Query: 62  PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 120
           P  I    +L    + NN L+ LP E+G L  L  L L++NQL     E  QL+ L  LD
Sbjct: 83  PKEIGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLEDLD 142

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL---------LKYLRSR 171
           LS NS + LP EIG++  L  L++  N L+TL   +  G    L         LK L   
Sbjct: 143 LSGNSFTILPKEIGRLQNLGSLIMRHNQLKTLPKEI--GQLKNLGELILEHSQLKTLPKE 200

Query: 172 LPENEDSEASTTKEDLITMATRLSVTSKE---LSLEGMNLSAIPSEIWEAGEITKLDLSR 228
           + + +D +  + + + +T+  +     K    LS +   L+ +P EI     +  LDL  
Sbjct: 201 IGQLKDLQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRN 260

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           N ++ LP E+    +L+ L LS N++K  P  +   L +L  L LDNN L  +P +
Sbjct: 261 NQLKTLPKEVGQLKNLRELYLSANQLKTLPKEV-GQLKNLRDLSLDNNQLETLPKE 315



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 163/367 (44%), Gaps = 81/367 (22%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL + ++  +P  I    +L E  + NN L+ LP E+G L  L  L L++NQ       
Sbjct: 26  LDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYANQ------- 78

Query: 111 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 170
                          L+ LP EIG++  L  L L  N L TL   +       LL+ L  
Sbjct: 79  ---------------LTILPKEIGQLKNLEYLDLNNNQLTTLPKEI------GLLQNL-- 115

Query: 171 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
                                       K L L    L+ +P EIW+   +  LDLS NS
Sbjct: 116 ----------------------------KILHLYANQLTVLPKEIWQLKNLEDLDLSGNS 147

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKD 288
              LP E+    +L +LI+  N++K  P  I   L +L  L L+++ L+ +P +    KD
Sbjct: 148 FTILPKEIGRLQNLGSLIMRHNQLKTLPKEI-GQLKNLGELILEHSQLKTLPKEIGQLKD 206

Query: 289 IPML-----QILDLSYNIASLP-------ENPPFSSLP-------HLQELYLRRMQLREA 329
           +  L     Q+  L   I  L        +N   + LP       +L  L LR  QL+  
Sbjct: 207 LQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTL 266

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
           P ++ +L+ LR L LS N L+++P+    L +L +L L +N +  LP E+G L+ +L+ L
Sbjct: 267 PKEVGQLKNLRELYLSANQLKTLPKEVGQLKNLRDLSLDNNQLETLPKEVGQLK-NLRWL 325

Query: 390 RLDGNPL 396
            LD NP+
Sbjct: 326 FLDANPI 332



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 112/231 (48%), Gaps = 12/231 (5%)

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E S T    +T A +  +  + L L    L+ +P EIW+   + +L L  N +  LP 
Sbjct: 2   QAEQSGTYYKALTKALQNPLDVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPK 61

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ--- 293
           E+    +L+ L L  N++   P  I   L +L  L L+NN L  +P    K+I +LQ   
Sbjct: 62  EIGLLQNLKILHLYANQLTILPKEI-GQLKNLEYLDLNNNQLTTLP----KEIGLLQNLK 116

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
           IL L  N +  LP+      L +L++L L        P +I RLQ L  L +  N L+++
Sbjct: 117 ILHLYANQLTVLPKE--IWQLKNLEDLDLSGNSFTILPKEIGRLQNLGSLIMRHNQLKTL 174

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P+    L +L EL L  + +  LP E+G L+  LQ L L  N L  + + I
Sbjct: 175 PKEIGQLKNLGELILEHSQLKTLPKEIGQLK-DLQHLSLRNNQLTILPKEI 224



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 23/149 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L +  N+LT+L   +     +LT L +  N L  +P+ IG L  L+ LDL  N++ +
Sbjct: 207 LQHLSLRNNQLTILPKEIEQLKNLLT-LSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKT 265

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P  +    +L E Y+  N L  LP E+G+L  L                        L 
Sbjct: 266 LPKEVGQLKNLRELYLSANQLKTLPKEVGQLKNLRD----------------------LS 303

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L NN L  LP E+G++  LR L L  NP+
Sbjct: 304 LDNNQLETLPKEVGQLKNLRWLFLDANPI 332


>gi|418698141|ref|ZP_13259120.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762845|gb|EKR29004.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 447

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 189/416 (45%), Gaps = 51/416 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L +E N++TVL    I     L EL  + N L  +P+ I  L  L  L L  NRI ++P 
Sbjct: 24  LKLEENRITVLPRE-INKLKNLKELYLNGNKLTIVPKEIWELENLTILRLENNRISTLPK 82

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L E  +  N L  LP E+G+L  L  L+L +N++K    E   L  L + +LS
Sbjct: 83  EIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLS 142

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS------------LVNGPTPALLKYLRS 170
            N L+ +P EIG +  LR L L  N L+TL               L+N       K +++
Sbjct: 143 GNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQA 202

Query: 171 RLP----ENEDSEASTTKEDL-ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
            LP    +  D E   T  +L + +   L + S  LSLE    S  P EI     +  L 
Sbjct: 203 LLPNCNIDLRDVEEGRTYRNLNLALEQPLKILS--LSLEYQEFSLFPKEILRLKNLRSLS 260

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPS 283
           L   S+  LP E+     L+ L L  N++K  P  I  L +L SL      NN    +P 
Sbjct: 261 LYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGA--NNEFEVLP- 317

Query: 284 DGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
              K+I  LQ                     +L+ L L + + +  P +I  L++L IL+
Sbjct: 318 ---KEIARLQ---------------------NLRSLLLNQNRFKIFPKEIWELKKLVILN 353

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           ++ N L ++PE    L  L  LDLS N ++ LP E+G L  +L  L L  N ++++
Sbjct: 354 VNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLH-NLTELYLQYNRIKTL 408



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 148/352 (42%), Gaps = 50/352 (14%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           +DL + +    P  I     L    +  N ++ LP E+ KL  L  L L+ N+L     E
Sbjct: 1   MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             +L  L++L L NN +S LP EI K   L++L L GN L TL   +        L    
Sbjct: 61  IWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLEN 120

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           +R                                    +  +P+EI     +   +LS N
Sbjct: 121 NR------------------------------------IKILPNEIGALENLWIFNLSGN 144

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  +P E+ +  +L+ L L  N++K  P   +  L  L  L L  NPL    S+  K I
Sbjct: 145 KLASIPKEIGNLQNLRMLYLENNQLKTLPRQ-MEKLQDLEVLNLLINPLL---SEERKKI 200

Query: 290 PMLQILDLSYNIASLPENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLRIL 342
             L + + + ++  + E   + +L         +  L L   +    P +ILRL+ LR L
Sbjct: 201 QAL-LPNCNIDLRDVEEGRTYRNLNLALEQPLKILSLSLEYQEFSLFPKEILRLKNLRSL 259

Query: 343 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
            L   SL ++P+    L  L  L L  N + +LP E+GLL  +L++L +  N
Sbjct: 260 SLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLR-NLRSLDIGAN 310



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 6/202 (2%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           + L     +  P EIWE   +  L L  N I  LP E++   +L+ L L+ NK+   P  
Sbjct: 1   MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I   L +L+ L+L+NN +  +P +  K    LQ L+L  N + +LP       L     L
Sbjct: 61  I-WELENLTILRLENNRISTLPKEIEKS-KNLQELNLRGNRLVTLPGEIGELKLLEELNL 118

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
              R+++   P +I  L+ L I +LS N L SIP+   NL +L  L L +N +  LP ++
Sbjct: 119 ENNRIKI--LPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQM 176

Query: 380 GLLEPSLQALRLDGNPLRSIRR 401
             L+  L+ L L  NPL S  R
Sbjct: 177 EKLQ-DLEVLNLLINPLLSEER 197



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 22  WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W +  L  L  + N L+ +PE IG L  L  LDL  NR+ ++PS I    +L E Y+  N
Sbjct: 344 WELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYN 403

Query: 80  ALSALPAELGKLSKLGTLDLHSN 102
            +  LP E+ +L  L  L L+ N
Sbjct: 404 RIKTLPEEIARLQNLRKLTLYEN 426


>gi|392396972|ref|YP_006433573.1| Leucine Rich Repeat (LRR)-containing protein [Flexibacter litoralis
           DSM 6794]
 gi|390528050|gb|AFM03780.1| Leucine Rich Repeat (LRR)-containing protein [Flexibacter litoralis
           DSM 6794]
          Length = 439

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 176/358 (49%), Gaps = 41/358 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMG 77
           IA    L +L    N ++ +P  + +L +L  L++  N  L   P  I+   +L      
Sbjct: 100 IAQLIHLKKLSFPHNWIDDLPAELANLDKLEELEIDNNYGLKHFPDVITKLKNLKVLKFT 159

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 136
           ++ ++ +P E+  L  L  LDL  N++++      +L RL  L L++N  + LP +I  +
Sbjct: 160 DSFITKIPKEIENLKMLRELDLSQNRIEKLPKNLSKLNRLESLILNHNEFTSLPKQIATL 219

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
           T+L++L L+ N L  + S + N     +L    +RL E  D           T++  L +
Sbjct: 220 TSLKELNLSMNELEVIPSFIGNYREMRVLSISATRLIEIPD-----------TLSNLLKL 268

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             +EL +   +L   P  I +  ++ KLD+S N I  +P ++S+  +++ L ++ NK+ +
Sbjct: 269 --EELDIGFNHLREFPISIIKLTKLKKLDISANRISNIPSQISALKNVEELNVNSNKLYN 326

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 316
           +P+ I TSL+ L  L L  N + Q+P    K +  L+ LD++ N         FSS P  
Sbjct: 327 FPEEI-TSLTKLKKLDLSFNTISQIPF-SIKKLKGLESLDIAVN--------QFSSFPK- 375

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
                          +IL L +L +L LS NS+Q+IP   + LT+L EL+   N +SA
Sbjct: 376 ---------------EILSLTKLEVLYLSSNSIQTIPLSIEKLTNLEELNCRQNPLSA 418



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 170/355 (47%), Gaps = 42/355 (11%)

Query: 47  RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ-LK 105
           R++ L  ++N +  +P  I+    L +    +N +  LPAEL  L KL  L++ +N  LK
Sbjct: 82  RVVELKFYRNELKIVPVEIAQLIHLKKLSFPHNWIDDLPAELANLDKLEELEIDNNYGLK 141

Query: 106 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164
            +     +L+ L VL  +++ ++ +P EI  +  LR+L L+ N +  L  +L      + 
Sbjct: 142 HFPDVITKLKNLKVLKFTDSFITKIPKEIENLKMLRELDLSQNRIEKLPKNL------SK 195

Query: 165 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
           L  L S L  N +   S  K+    +AT  S+  KEL+L    L  IPS I    E+  L
Sbjct: 196 LNRLES-LILNHNEFTSLPKQ----IATLTSL--KELNLSMNELEVIPSFIGNYREMRVL 248

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
            +S   + E+P  LS+   L+ L +  N ++++P +I+  L+ L  L +  N +  +PS 
Sbjct: 249 SISATRLIEIPDTLSNLLKLEELDIGFNHLREFPISII-KLTKLKKLDISANRISNIPSQ 307

Query: 285 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
                                     S+L +++EL +   +L   P +I  L +L+ LDL
Sbjct: 308 -------------------------ISALKNVEELNVNSNKLYNFPEEITSLTKLKKLDL 342

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           S N++  IP   K L  L  LD++ N  S+ P E+  L   L+ L L  N +++I
Sbjct: 343 SFNTISQIPFSIKKLKGLESLDIAVNQFSSFPKEILSL-TKLEVLYLSSNSIQTI 396



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 4/169 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N L     ++I   T L +L  S N ++ +P  I +L  +  L+++ N++ +
Sbjct: 268 LEELDIGFNHLREFPISIIK-LTKLKKLDISANRISNIPSQISALKNVEELNVNSNKLYN 326

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
            P  I+    L +  +  N +S +P  + KL  L +LD+  NQ   +  E   L +L VL
Sbjct: 327 FPEEITSLTKLKKLDLSFNTISQIPFSIKKLKGLESLDIAVNQFSSFPKEILSLTKLEVL 386

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
            LS+NS+  +P  I K+T L +L    NPL      ++N      LKY+
Sbjct: 387 YLSSNSIQTIPLSIEKLTNLEELNCRQNPLSAETIKMINESKA--LKYM 433


>gi|194907948|ref|XP_001981667.1| GG11485 [Drosophila erecta]
 gi|190656305|gb|EDV53537.1| GG11485 [Drosophila erecta]
          Length = 1855

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 117/240 (48%), Gaps = 20/240 (8%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            L  L L  N L+ L  +L N        L +   S LP +            I   T+L
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------------IGQMTKL 315

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
           S     L+++   L  +P EI +   +  L L  N ++ LPPEL +C  L  L +S N++
Sbjct: 316 S----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQL 371



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 SNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|391336550|ref|XP_003742642.1| PREDICTED: LOW QUALITY PROTEIN: protein lap4-like [Metaseiulus
           occidentalis]
          Length = 1488

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 122/398 (30%), Positives = 180/398 (45%), Gaps = 68/398 (17%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I +W +L EL  SKN ++ +PE +  L  L  LDL QN +   P  +    +L   Y+ +
Sbjct: 79  IGAWQLLQELDLSKNDISDIPEGLRHLRNLQLLDLSQNCLYRTPDFLVDLKNLNALYLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
            AL+ALP   G LS L  L+L  N LK       QL+ L  LDL +N +  L P IG++ 
Sbjct: 139 VALAALPVAFGMLSSLTILELRDNSLKNLPDSFGQLKHLERLDLGSNEIEELSPVIGRLE 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +L +L L  NPL                    SRLP +            I   +RL   
Sbjct: 199 SLEELWLDCNPL--------------------SRLPGD------------IGKLSRL--- 223

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            K L +    L A+P+EI +   ++ L LS+N + +LP ++    +L  L + +N I   
Sbjct: 224 -KCLDVSESRLEALPNEICQLSSLSDLLLSQNLLTKLPKDIGKLRTLTILKVDQNHISHI 282

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L    SL  L L +N L QVP                         P   +L  L 
Sbjct: 283 PDS-LGYCESLQELILTDNELTQVP-------------------------PDIGNLTKLT 316

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L + R  L+  P DI +L++L +L L +N L  +P    NL+SL  +D+S N +  LP 
Sbjct: 317 NLNIDRNLLQRLPPDIGKLEKLTMLSLRENRLSELPLEIGNLSSLHVMDISGNRLKNLPI 376

Query: 378 ELGLLEPSLQALRLDGN---PLRSIRRTILDRGTKAVL 412
            +  L   L+AL L  N   PL   ++ + +   + VL
Sbjct: 377 SMASLR--LKALWLAENQSQPLLKFQQDVDEETGEKVL 412



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 176/382 (46%), Gaps = 43/382 (11%)

Query: 43  GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 102
           GS  R+ R+D   + ++++P  I    SL +  + +N +  LP  L +L KL       N
Sbjct: 11  GSNRRVERVDRSHSNLVAVPEEIGRYRSLEQLALNSNHIKELPKHLFRLQKLRVFTASDN 70

Query: 103 QLKE--YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 160
           +++E    + A QL L  LDLS N +S +P  +  +  L+ L L+ N L      LV+  
Sbjct: 71  EIQEIPQDIGAWQL-LQELDLSKNDISDIPEGLRHLRNLQLLDLSQNCLYRTPDFLVD-- 127

Query: 161 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 220
               LK L + L  N+ + A+        M + L++    L L   +L  +P    +   
Sbjct: 128 ----LKNLNA-LYLNDVALAALPV--AFGMLSSLTI----LELRDNSLKNLPDSFGQLKH 176

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
           + +LDL  N I+EL P +    SL+ L L  N +   P  I   LS L CL +  + L  
Sbjct: 177 LERLDLGSNEIEELSPVIGRLESLEELWLDCNPLSRLPGDI-GKLSRLKCLDVSESRLEA 235

Query: 281 VPSDGF-------------------KDIPMLQILDL----SYNIASLPENPPFSSLPHLQ 317
           +P++                     KDI  L+ L +      +I+ +P++        LQ
Sbjct: 236 LPNEICQLSSLSDLLLSQNLLTKLPKDIGKLRTLTILKVDQNHISHIPDS--LGYCESLQ 293

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           EL L   +L + P DI  L +L  L++ +N LQ +P     L  LT L L +N +S LP 
Sbjct: 294 ELILTDNELTQVPPDIGNLTKLTNLNIDRNLLQRLPPDIGKLEKLTMLSLRENRLSELPL 353

Query: 378 ELGLLEPSLQALRLDGNPLRSI 399
           E+G L  SL  + + GN L+++
Sbjct: 354 EIGNLS-SLHVMDISGNRLKNL 374



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L V+ N ++ + ++L      L ELI + N L  +P  IG+L++L  L++ +N +  +P 
Sbjct: 272 LKVDQNHISHIPDSL-GYCESLQELILTDNELTQVPPDIGNLTKLTNLNIDRNLLQRLPP 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I     L    +  N LS LP E+G LS L  +D+  N+LK   +    LRL  L L+ 
Sbjct: 331 DIGKLEKLTMLSLRENRLSELPLEIGNLSSLHVMDISGNRLKNLPISMASLRLKALWLAE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|407927392|gb|EKG20286.1| hypothetical protein MPH_02404 [Macrophomina phaseolina MS6]
          Length = 789

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 195/439 (44%), Gaps = 54/439 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG--MPETIGSLSRLIRLDLHQNRILSI 61
           L+V  N L+ L    +AS   L EL ASKN L G  +PE +  + RL  LDL  N + S+
Sbjct: 344 LNVNTNGLSSLPMETLASLP-LVELSASKNALRGAFLPEDVSEMPRLQNLDLSGNALTSL 402

Query: 62  PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 120
            SS     +L    +  N +  LP   G  S L TL    N+L E+      L+ L   +
Sbjct: 403 GSSTLSMPALKSLNVSINRIETLPNLTGWTSLL-TLLAEENKLSEFPAGFTSLKSLKQAN 461

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL-PENEDSE 179
            + N +S +  EIG M +L  L L  NPLR  +   +N     L + L+ R  P     E
Sbjct: 462 FNGNDISKIDAEIGLMESLDMLTLAANPLRERKYLTMNAED--LKRDLKMRHNPAAAADE 519

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                ED+   +  +  T+   +L+       PS +        LDLS  S+ +L  E  
Sbjct: 520 GVEKAEDIDESSNGIIPTNSMWALK-------PSGV--------LDLSSKSMPDLDEEEF 564

Query: 240 S--CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           +   A  + LIL  N     PDA+  + ++++ L L NN L    +D     P L+ L L
Sbjct: 565 ALVAADCRQLILHHNHFTYIPDAVALA-TNITLLDLSNNRLTTTFTDEVS-FPALRDLRL 622

Query: 298 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI-------------LRLQQLRILDL 344
           + N            LP L  L       R A  D+              R  +L  L  
Sbjct: 623 AAN-----------KLPSLDFLTANLSASRLATLDVSANRLAGPLPALRARFPELTTLLA 671

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL-EPSLQALRLDGNPLRSIRRTI 403
           S N  + I    + L  L  + L++N+I  +PPE+GLL E  L++L ++GN  R      
Sbjct: 672 SDNGFEDISR--EALDGLQTVGLANNSIGRVPPEIGLLWEKGLRSLEIEGNTFRVPNYAT 729

Query: 404 LDRGTKAVLKYLKDKIPEN 422
           L RGT+AV+ +L+DKIP +
Sbjct: 730 LKRGTEAVMSWLRDKIPAD 748



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 109/251 (43%), Gaps = 76/251 (30%)

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK-DWPDAI---------------- 261
           G +  LDL  N ++ELP  L     L  L L RN+++ D  D I                
Sbjct: 245 GGLEMLDLHGNILKELPIGLRRLERLTVLNLFRNRLRNDVFDVISQISSLRELRLAENDL 304

Query: 262 -------LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 313
                  + SLS+L  L+L  N + ++P D  KD+  L+ L+++ N ++SLP     +SL
Sbjct: 305 EGELPESVGSLSNLEVLELQGNKISRLP-DTMKDLVNLRALNVNTNGLSSLPME-TLASL 362

Query: 314 PHLQELYLRRMQLREA--PTDILRLQQLRILDLSQNSLQSI------------------- 352
           P L EL   +  LR A  P D+  + +L+ LDLS N+L S+                   
Sbjct: 363 P-LVELSASKNALRGAFLPEDVSEMPRLQNLDLSGNALTSLGSSTLSMPALKSLNVSINR 421

Query: 353 --------------------------PEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
                                     P GF +L SL + + + N+IS +  E+GL+E SL
Sbjct: 422 IETLPNLTGWTSLLTLLAEENKLSEFPAGFTSLKSLKQANFNGNDISKIDAEIGLME-SL 480

Query: 387 QALRLDGNPLR 397
             L L  NPLR
Sbjct: 481 DMLTLAANPLR 491


>gi|225718316|gb|ACO15004.1| Ras suppressor protein 1 [Caligus clemensi]
          Length = 284

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 123/236 (52%), Gaps = 12/236 (5%)

Query: 189 TMATRLSVTSKELSLEGMNLSAIPSEI---WEAGEITKLDLSRNSIQELPPELSSCASLQ 245
           T+    ++ + E+     NL  + S++   W    IT+L LS N I E+PP +++  +L+
Sbjct: 11  TLEEAKNIPNAEIDFSDKNLIHLESDLSRLWGLKNITRLTLSHNKILEIPPAMANLDNLE 70

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN---IA 302
            L L  N +++ P A L+ LS+L  L L  N L  +P  GF   P L++LDLSYN    +
Sbjct: 71  ILNLFNNDLEEIPLA-LSELSNLRILNLAQNKLNSLPR-GFGSFPNLEVLDLSYNNLNES 128

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
            LP N  F  +  L+ LYL        P+++ RL  LRIL L  N+L  +PE    L +L
Sbjct: 129 VLPGN--FFIMSSLRALYLSDNDFEVLPSELGRLVNLRILALRDNNLVELPEEIGALINL 186

Query: 363 TELDLSDNNISALPPELGLLE--PSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
            EL L  N ++ LPP LG L+   S   ++LD NP        L  G   V++Y++
Sbjct: 187 RELHLQGNRLTVLPPSLGSLDFLSSRAIIKLDNNPWVQPIEETLQLGISHVIEYIR 242



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 5/156 (3%)

Query: 2   SKLDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 59
           +++D     L  L ++L   W +  +T L  S N +  +P  + +L  L  L+L  N + 
Sbjct: 21  AEIDFSDKNLIHLESDLSRLWGLKNITRLTLSHNKILEIPPAMANLDNLEILNLFNNDLE 80

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS-- 117
            IP ++S   +L    +  N L++LP   G    L  LDL  N L E  +      +S  
Sbjct: 81  EIPLALSELSNLRILNLAQNKLNSLPRGFGSFPNLEVLDLSYNNLNESVLPGNFFIMSSL 140

Query: 118 -VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
             L LS+N    LP E+G++  LR L L  N L  L
Sbjct: 141 RALYLSDNDFEVLPSELGRLVNLRILALRDNNLVEL 176



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 58/128 (45%), Gaps = 24/128 (18%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILS--IPSSISGCCSLAEFYMGNNALSALPAEL 88
           ++N LN +P   GS   L  LDL  N +    +P +     SL   Y+ +N    LP+EL
Sbjct: 98  AQNKLNSLPRGFGSFPNLEVLDLSYNNLNESVLPGNFFIMSSLRALYLSDNDFEVLPSEL 157

Query: 89  GKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
           G+L                      + L +L L +N+L  LP EIG +  LR+L L GN 
Sbjct: 158 GRL----------------------VNLRILALRDNNLVELPEEIGALINLRELHLQGNR 195

Query: 149 LRTLRSSL 156
           L  L  SL
Sbjct: 196 LTVLPPSL 203



 Score = 38.5 bits (88), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 14/179 (7%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL--- 172
           ++ L LS+N +  +PP +  +  L  L L  N L  +  +L       +L   +++L   
Sbjct: 46  ITRLTLSHNKILEIPPAMANLDNLEILNLFNNDLEEIPLALSELSNLRILNLAQNKLNSL 105

Query: 173 -------PENE--DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 223
                  P  E  D   +   E ++     +  + + L L   +   +PSE+     +  
Sbjct: 106 PRGFGSFPNLEVLDLSYNNLNESVLPGNFFIMSSLRALYLSDNDFEVLPSELGRLVNLRI 165

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQ 280
           L L  N++ ELP E+ +  +L+ L L  N++   P ++  L  LSS + +KLDNNP  Q
Sbjct: 166 LALRDNNLVELPEEIGALINLRELHLQGNRLTVLPPSLGSLDFLSSRAIIKLDNNPWVQ 224


>gi|350591711|ref|XP_003358723.2| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Sus scrofa]
          Length = 561

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 205/469 (43%), Gaps = 68/469 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL- 59
           + ++ +E N++T +  + I     +  L  +KN L  +   +G LSRL  LDL  N +L 
Sbjct: 51  LEEVHLENNQITEIPKD-IKYLRNVRILYLNKNKLRDLCPELGELSRLEGLDLSDNPLLA 109

Query: 60  -SIP--SSISGCCSLAEFY--MG-------------------NNALSALPAELGKLSKLG 95
            S+P  SS      L  ++  MG                    N L +LP E+   +KL 
Sbjct: 110 SSLPVLSSNRKLRELRLYHTDMGEIPIVLCKLLHHLELLGLAGNHLKSLPKEIANQTKLR 169

Query: 96  TLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 154
            + L  NQ + + +E C L  L ++DL  N L+ +P EIG +  LRK  +  N L  L  
Sbjct: 170 EIHLKQNQFEVFPLELCLLDNLEIIDLDENKLTVIPEEIGNLRKLRKFYVAYNSLPVLPE 229

Query: 155 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 214
           +L      ++L    +RL     + A  T+               E+ L G +L  +P  
Sbjct: 230 ALCQCTQLSVLDLSYNRLHSIPHTLAELTE-------------MTEVGLSGNHLEKVPRL 276

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           I +   +  L L    ++ L        +L+ L LS+N ++  P  I  +L +L  L LD
Sbjct: 277 ICKWTSLHLLYLRNTGLRVLRHNFRRLVNLRFLDLSQNCLECCPLQI-CALRNLEILALD 335

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE-----------------NPPFSSLPH- 315
           +N + Q+PSD F  +  L++L L+ N  +S PE                     + LP  
Sbjct: 336 DNKIYQLPSD-FGSLSKLKMLGLTGNQFSSFPEEILSLESLEKLYIGQDQGAKLTHLPEC 394

Query: 316 ------LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
                 L+ELY+    L   P  +  +  L ILD   N ++ +P+      +L EL L D
Sbjct: 395 IRKLQSLKELYIENNHLEHLPVSLGSMPNLEILDCRHNLIKQLPDAICQAQALKELRLED 454

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDK 418
           N I++LP  L  L  +L+ L L  NP+     T+  +G + V  +LK +
Sbjct: 455 NLITSLPENLDSL-VNLKVLTLMNNPIEEPPMTVCTKGPETVWIHLKKR 502



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 163/356 (45%), Gaps = 39/356 (10%)

Query: 74  FYM--GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 130
           F++   N +L A+PA + +L +L  + L +NQ+ E   +   LR + +L L+ N L  L 
Sbjct: 29  FFIDASNQSLPAIPAAILELRELEEVHLENNQITEIPKDIKYLRNVRILYLNKNKLRDLC 88

Query: 131 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 190
           PE+G+++ L  L L+ NPL  L SSL    +   L+ LR            T   ++  +
Sbjct: 89  PELGELSRLEGLDLSDNPL--LASSLPVLSSNRKLRELRL---------YHTDMGEIPIV 137

Query: 191 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILS 250
             +L    + L L G +L ++P EI    ++ ++ L +N  +  P EL    +L+ + L 
Sbjct: 138 LCKLLHHLELLGLAGNHLKSLPKEIANQTKLREIHLKQNQFEVFPLELCLLDNLEIIDLD 197

Query: 251 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--------IA 302
            NK+   P+ I  +L  L    +  N L  +P +       L +LDLSYN        +A
Sbjct: 198 ENKLTVIPEEI-GNLRKLRKFYVAYNSLPVLP-EALCQCTQLSVLDLSYNRLHSIPHTLA 255

Query: 303 SLPENPPFS-SLPHLQE-------------LYLRRMQLREAPTDILRLQQLRILDLSQNS 348
            L E      S  HL++             LYLR   LR    +  RL  LR LDLSQN 
Sbjct: 256 ELTEMTEVGLSGNHLEKVPRLICKWTSLHLLYLRNTGLRVLRHNFRRLVNLRFLDLSQNC 315

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
           L+  P     L +L  L L DN I  LP + G L   L+ L L GN   S    IL
Sbjct: 316 LECCPLQICALRNLEILALDDNKIYQLPSDFGSLS-KLKMLGLTGNQFSSFPEEIL 370


>gi|386766579|ref|NP_001247322.1| scribbled, isoform R [Drosophila melanogaster]
 gi|383292971|gb|AFH06639.1| scribbled, isoform R [Drosophila melanogaster]
          Length = 1951

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|260812958|ref|XP_002601187.1| hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae]
 gi|229286478|gb|EEN57199.1| hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae]
          Length = 1577

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 192/421 (45%), Gaps = 46/421 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  N    LSN LI    +    +A  NL   +P  +  L +L  L L  N  ++
Sbjct: 48  LEALDLSRNMNMELSNGLIKLTNLKLLSLAGCNLAT-VPAAVMKLPQLETLILSNNENIT 106

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  +SG  +L   ++    L +LP  + KLS L +LDL  N+      E C+L  +  L
Sbjct: 107 LPDDMSGLVNLTAIHLDWCNLDSLPPVVLKLSHLRSLDLSGNEQISLPDELCRLENIKEL 166

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L    ++ +PP + K+T L KL L+GN                        LP      
Sbjct: 167 RLYACFMATVPPAVLKLTQLEKLNLSGN--------------------WGIHLP------ 200

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE--LPPE 237
                 D ++  T + V    L L G  +  +PS  W   ++ +L LS N +Q   LP +
Sbjct: 201 ------DGLSRLTNIRV----LILLGTGMDTVPSVAWRLTQLERLYLSLNPLQTSTLPAK 250

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           +    +++ L LS  ++   P  +   L+ L  L L +NPL+ +P++    +  ++ LDL
Sbjct: 251 VGHLTNIKHLHLSHCQLHTLPPEV-GRLTQLEWLDLSSNPLQTLPAE-VGQLTKVKHLDL 308

Query: 298 SY-NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
           SY  + +LP  P    L  L+ L LR   ++  P ++ +L  ++ L LS   L ++P   
Sbjct: 309 SYCQLHTLP--PEVGRLTQLERLDLRNNPIQTLPVEVGQLTNIKHLKLSHCQLHTLPPEV 366

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
             LT L  LDLS N +  LP E+G L  ++  L + GNPL      +  +G  A+ +Y  
Sbjct: 367 GRLTQLEWLDLSSNPLQTLPAEVGQLT-NVSYLHVSGNPLIKPPSEVCRQGISAIRRYFD 425

Query: 417 D 417
           +
Sbjct: 426 E 426



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 170/384 (44%), Gaps = 63/384 (16%)

Query: 17  NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 76
           +++   T+LT  +  KNL   +P+ +  L  L  LDL +N  + + + +    +L    +
Sbjct: 18  DIMGKMTLLTLELRYKNL-KQLPDELFELKDLEALDLSRNMNMELSNGLIKLTNLKLLSL 76

Query: 77  GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGK 135
               L+ +PA + KL +L TL L +N+      +   L  L+ + L   +L  LPP + K
Sbjct: 77  AGCNLATVPAAVMKLPQLETLILSNNENITLPDDMSGLVNLTAIHLDWCNLDSLPPVVLK 136

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           ++ LR L L+GN   +L   L              RL EN                    
Sbjct: 137 LSHLRSLDLSGNEQISLPDELC-------------RL-EN-------------------- 162

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              KEL L    ++ +P  + +  ++ KL+LS N    LP  LS   +++ LIL    + 
Sbjct: 163 --IKELRLYACFMATVPPAVLKLTQLEKLNLSGNWGIHLPDGLSRLTNIRVLILLGTGMD 220

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 315
             P ++   L+ L  L L  NPL+                      ++LP       L +
Sbjct: 221 TVP-SVAWRLTQLERLYLSLNPLQ---------------------TSTLPAK--VGHLTN 256

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           ++ L+L   QL   P ++ RL QL  LDLS N LQ++P     LT +  LDLS   +  L
Sbjct: 257 IKHLHLSHCQLHTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTKVKHLDLSYCQLHTL 316

Query: 376 PPELGLLEPSLQALRLDGNPLRSI 399
           PPE+G L   L+ L L  NP++++
Sbjct: 317 PPEVGRLT-QLERLDLRNNPIQTL 339


>gi|320103236|ref|YP_004178827.1| adenylate cyclase [Isosphaera pallida ATCC 43644]
 gi|319750518|gb|ADV62278.1| Adenylate cyclase [Isosphaera pallida ATCC 43644]
          Length = 278

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 132/267 (49%), Gaps = 19/267 (7%)

Query: 40  ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 99
           E++GS S    LDL +NR+  IP+ I  C  L    +  N L+ LP+EL KL+KL  LDL
Sbjct: 14  ESLGSTS----LDLGRNRLSRIPAEIGRCVKLTRLILRGNRLAELPSELAKLTKLSELDL 69

Query: 100 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
            SNQL +      +L  L+VLDL +N L+ LP E G++T L +L L GN LR L + +  
Sbjct: 70  SSNQLTQLPAVVTRLHGLTVLDLHSNRLTQLPAEFGQLTKLIRLNLQGNQLRRLPAEIGK 129

Query: 159 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 218
                L K +   L  N+        E L     +L+   K L L    L ++P EI + 
Sbjct: 130 -----LTKLMELNLHHNK-------LEALPPEIGKLTAVVK-LYLRQNRLRSLPPEIGKM 176

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
             +  L+L  N +  LPPE+     L  L L+ N++   P  I   L+ L  L L +NPL
Sbjct: 177 VALCWLNLYNNELTSLPPEIGKLRQLVKLNLAANRLTTLPPEI-GQLTRLGTLDLSHNPL 235

Query: 279 RQVPSDGFKDIPMLQILDLSYNIASLP 305
             +P    +   + QIL    + A LP
Sbjct: 236 EHLPPQLSQLSGLRQILADGLDPAILP 262



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 131/263 (49%), Gaps = 27/263 (10%)

Query: 26  TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 85
           T L   +N L+ +P  IG   +L RL L  NR+  +PS ++    L+E  + +N L+ LP
Sbjct: 19  TSLDLGRNRLSRIPAEIGRCVKLTRLILRGNRLAELPSELAKLTKLSELDLSSNQLTQLP 78

Query: 86  AELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 144
           A + +L  L  LDLHSN+L +   E  QL +L  L+L  N L  LP EIGK+T L +L L
Sbjct: 79  AVVTRLHGLTVLDLHSNRLTQLPAEFGQLTKLIRLNLQGNQLRRLPAEIGKLTKLMELNL 138

Query: 145 TGNPLRTLRSSLVNGPTPALLK-YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
             N L  L   +  G   A++K YLR    +N           ++ +          L+L
Sbjct: 139 HHNKLEALPPEI--GKLTAVVKLYLR----QNRLRSLPPEIGKMVALCW--------LNL 184

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
               L+++P EI +  ++ KL+L+ N +  LPPE+     L TL LS N ++  P     
Sbjct: 185 YNNELTSLPPEIGKLRQLVKLNLAANRLTTLPPEIGQLTRLGTLDLSHNPLEHLPP---- 240

Query: 264 SLSSLSCLKLDNNPLRQVPSDGF 286
            LS LS        LRQ+ +DG 
Sbjct: 241 QLSQLSG-------LRQILADGL 256



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 117/249 (46%), Gaps = 38/249 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L + GN+L  L + L A  T L+EL  S N L  +P  +  L  L  LDLH NR+  
Sbjct: 41  LTRLILRGNRLAELPSEL-AKLTKLSELDLSSNQLTQLPAVVTRLHGLTVLDLHSNRLTQ 99

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-L 119
           +P+       L    +  N L  LPAE+GKL+KL  L+LH N+L+    E  +L   V L
Sbjct: 100 LPAEFGQLTKLIRLNLQGNQLRRLPAEIGKLTKLMELNLHHNKLEALPPEIGKLTAVVKL 159

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N L  LPPEIGKM  L  L L  N L +L         P  +  LR  +       
Sbjct: 160 YLRQNRLRSLPPEIGKMVALCWLNLYNNELTSL---------PPEIGKLRQLV------- 203

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                               +L+L    L+ +P EI +   +  LDLS N ++ LPP+LS
Sbjct: 204 --------------------KLNLAANRLTTLPPEIGQLTRLGTLDLSHNPLEHLPPQLS 243

Query: 240 SCASLQTLI 248
             + L+ ++
Sbjct: 244 QLSGLRQIL 252



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 86/145 (59%), Gaps = 2/145 (1%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +L+++GN+L  L    I   T L EL    N L  +P  IG L+ +++L L QNR+ S+P
Sbjct: 112 RLNLQGNQLRRLPAE-IGKLTKLMELNLHHNKLEALPPEIGKLTAVVKLYLRQNRLRSLP 170

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
             I    +L    + NN L++LP E+GKL +L  L+L +N+L     E  QL RL  LDL
Sbjct: 171 PEIGKMVALCWLNLYNNELTSLPPEIGKLRQLVKLNLAANRLTTLPPEIGQLTRLGTLDL 230

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTG 146
           S+N L  LPP++ +++ LR++L  G
Sbjct: 231 SHNPLEHLPPQLSQLSGLRQILADG 255



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 6/205 (2%)

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
           V    L L G  L+ +PSE+ +  ++++LDLS N + +LP  ++    L  L L  N++ 
Sbjct: 39  VKLTRLILRGNRLAELPSELAKLTKLSELDLSSNQLTQLPAVVTRLHGLTVLDLHSNRLT 98

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLP 314
             P A    L+ L  L L  N LR++P++  K   +++ L+L +N + +LP  P    L 
Sbjct: 99  QLP-AEFGQLTKLIRLNLQGNQLRRLPAEIGKLTKLME-LNLHHNKLEALP--PEIGKLT 154

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA 374
            + +LYLR+ +LR  P +I ++  L  L+L  N L S+P     L  L +L+L+ N ++ 
Sbjct: 155 AVVKLYLRQNRLRSLPPEIGKMVALCWLNLYNNELTSLPPEIGKLRQLVKLNLAANRLTT 214

Query: 375 LPPELGLLEPSLQALRLDGNPLRSI 399
           LPPE+G L   L  L L  NPL  +
Sbjct: 215 LPPEIGQLT-RLGTLDLSHNPLEHL 238



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 114/261 (43%), Gaps = 39/261 (14%)

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LDL  N LS +P EIG+   L +L+L GN L  L S L                      
Sbjct: 21  LDLGRNRLSRIPAEIGRCVKLTRLILRGNRLAELPSELAK-------------------- 60

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                        T+LS    EL L    L+ +P+ +     +T LDL  N + +LP E 
Sbjct: 61  ------------LTKLS----ELDLSSNQLTQLPAVVTRLHGLTVLDLHSNRLTQLPAEF 104

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
                L  L L  N+++  P  I   L+ L  L L +N L  +P +  K   ++++    
Sbjct: 105 GQLTKLIRLNLQGNQLRRLPAEI-GKLTKLMELNLHHNKLEALPPEIGKLTAVVKLYLRQ 163

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
             + SLP  P    +  L  L L   +L   P +I +L+QL  L+L+ N L ++P     
Sbjct: 164 NRLRSLP--PEIGKMVALCWLNLYNNELTSLPPEIGKLRQLVKLNLAANRLTTLPPEIGQ 221

Query: 359 LTSLTELDLSDNNISALPPEL 379
           LT L  LDLS N +  LPP+L
Sbjct: 222 LTRLGTLDLSHNPLEHLPPQL 242


>gi|195349707|ref|XP_002041384.1| GM10328 [Drosophila sechellia]
 gi|194123079|gb|EDW45122.1| GM10328 [Drosophila sechellia]
          Length = 1851

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 125/265 (47%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  +++ L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 SNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|421116143|ref|ZP_15576532.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410012309|gb|EKO70411.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 356

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 153/330 (46%), Gaps = 42/330 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L+L   ++ ++P  I    +L    + NN    LP E+G+L  L  L+L +NQLK    E
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKE 112

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L  L LS N L+  P EIG++  L+KL L  N L TL   +  G   +L K   
Sbjct: 113 IGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEI--GQLQSLQK--- 167

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                                          L+L+   L A+P+EI +   + +L LS N
Sbjct: 168 -------------------------------LNLDKNRLKALPNEIGQLQNLQELYLSNN 196

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP E+    +LQ LIL  N++   P  I   L +L  L   NN L  +P +    +
Sbjct: 197 QLTILPEEIGQLKNLQALILGDNQLTILPKEI-GQLQNLKLLYSVNNELTILPQE-IGQL 254

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ L LS+N + +LP+      L +LQELYL   QL   P +I +L+ L+      N 
Sbjct: 255 QKLQYLYLSHNQLTTLPK--EIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQ 312

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L  +P+    L +L  L L++N +S+   E
Sbjct: 313 LTMLPQEIGQLQNLQWLKLNNNQLSSQEEE 342



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 145/305 (47%), Gaps = 63/305 (20%)

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
            L+ LP E+ +L  L +LDL +NQ K    E  QL+ L  L+L NN L  LP EIG++  
Sbjct: 59  KLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQN 118

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L+ L+L+ N L T          P  +  L++                            
Sbjct: 119 LQTLILSVNRLTTF---------PQEIGQLKNL--------------------------- 142

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L+L+   L+ +  EI +   + KL+L +N ++ LP E+    +LQ L LS N++   P
Sbjct: 143 QKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILP 202

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 318
           + I   L +L  L L +N L  +P    K+I  LQ L L Y++ +               
Sbjct: 203 EEI-GQLKNLQALILGDNQLTILP----KEIGQLQNLKLLYSVNN--------------- 242

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
                 +L   P +I +LQ+L+ L LS N L ++P+    L +L EL L+DN ++ LP E
Sbjct: 243 ------ELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKE 296

Query: 379 LGLLE 383
           +G L+
Sbjct: 297 IGQLK 301



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 149/300 (49%), Gaps = 24/300 (8%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS+  L+ LP EI ++  L+ L L  N  +TL   +        L    ++L 
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQL- 106

Query: 174 ENEDSEASTTK--EDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEIT 222
           +N   E    +  + LI    RL+   +E         L+L+   L+ +  EI +   + 
Sbjct: 107 KNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQ 166

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           KL+L +N ++ LP E+    +LQ L LS N++   P+ I   L +L  L L +N L  +P
Sbjct: 167 KLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEI-GQLKNLQALILGDNQLTILP 225

Query: 283 SDGFKDIPMLQILDLSYNIAS----LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
               K+I  LQ L L Y++ +    LP+      L  LQ LYL   QL   P +I +L+ 
Sbjct: 226 ----KEIGQLQNLKLLYSVNNELTILPQ--EIGQLQKLQYLYLSHNQLTTLPKEIGQLEN 279

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L+ L L+ N L ++P+    L +L      +N ++ LP E+G L+ +LQ L+L+ N L S
Sbjct: 280 LQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQ-NLQWLKLNNNQLSS 338



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 132/288 (45%), Gaps = 17/288 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++   KLT L    I     L  L  + N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 53  LNLSSQKLTTLPKE-IKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    +  N L+  P E+G+L  L  L+L  NQL     E  QL+ L  L+L 
Sbjct: 112 EIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLD 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPENEDSE 179
            N L  LP EIG++  L++L L+ N L  L      L N     L     + LP+ E  +
Sbjct: 172 KNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPK-EIGQ 230

Query: 180 ASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
               K  L ++   L++  +E         L L    L+ +P EI +   + +L L+ N 
Sbjct: 231 LQNLK-LLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQ 289

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
           +  LP E+    +LQT I   N++   P  I   L +L  LKL+NN L
Sbjct: 290 LTTLPKEIGQLKNLQTFISFNNQLTMLPQEI-GQLQNLQWLKLNNNQL 336



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 102/197 (51%), Gaps = 5/197 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L+L    L+ +P EI +   +  LDL+ N  + LP E+    +LQ L
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQEL 99

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            L  N++K+ P  I   L +L  L L  N L   P +    +  LQ L+L YN + +L +
Sbjct: 100 NLWNNQLKNLPKEI-GQLQNLQTLILSVNRLTTFPQE-IGQLKNLQKLNLDYNQLTTLLQ 157

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L  LQ+L L + +L+  P +I +LQ L+ L LS N L  +PE    L +L  L 
Sbjct: 158 --EIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALI 215

Query: 367 LSDNNISALPPELGLLE 383
           L DN ++ LP E+G L+
Sbjct: 216 LGDNQLTILPKEIGQLQ 232


>gi|379729933|ref|YP_005322129.1| hypothetical protein SGRA_1810 [Saprospira grandis str. Lewin]
 gi|378575544|gb|AFC24545.1| leucine-rich repeat-containing protein [Saprospira grandis str.
           Lewin]
          Length = 606

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 179/399 (44%), Gaps = 43/399 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L ++GN+L +L NNL A    L  + A  N L  +PET+G L RL  L L +N++  
Sbjct: 149 LRRLYIDGNELRMLPNNL-AEIRKLAFIAAENNQLQSIPETLGKLKRLRSLLLDKNQLQY 207

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE-------------Y 107
           +P ++SG  +L    + +N L  LP  L  L KL  L    N+L+E              
Sbjct: 208 LPETLSGASALEVLAIDDNRLKKLPEALIYLKKLTFLFAAHNELQELPPQIGSSRNLVKL 267

Query: 108 CVEACQL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           CVE  QL           +L +L L +N L  LP   G++  LRKL L  N L  L  + 
Sbjct: 268 CVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKNFGQLKALRKLYLDSNQLTVLPINF 327

Query: 157 VNGPTPALLK-YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 215
             G   AL   YL      +  S     KE             +EL L    ++++P  +
Sbjct: 328 --GELRALENLYLSDNQLTSLPSGIGNCKE------------LRELFLNNNAMTSLPDSM 373

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW-PDAILTSLSSLSCLKLD 274
               ++ +L ++ N I  LP       +L+ L L+ NKI     D   +    LS + L+
Sbjct: 374 GTLYQLEELYMNDNQIANLPSSFGGLKNLKLLFLTNNKINRLSEDLDCSGWKRLSAIYLE 433

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           NN  +++P    +  P LQ L L  N+ S   +     +P ++ + L   QL E P D +
Sbjct: 434 NNAFQKLPK-ALETAPQLQTLYLDGNLISEVNDSIIIKMPKIEHISLNDNQLSELP-DNM 491

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
               +R L L +N +  +PE  +   +L  LDL+ N I+
Sbjct: 492 GSWPIRHLALERNGIMDLPESIRYFKNLELLDLAGNKIT 530



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 161/343 (46%), Gaps = 42/343 (12%)

Query: 40  ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 99
           ++I     L  L+L  N +  +P  +     L E  + NN L  LP ++  L  L  L +
Sbjct: 95  DSIREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQLQYLPEKIKGLRNLRRLYI 154

Query: 100 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
             N+L+       ++R L+ +   NN L  +P  +GK+  LR LLL  N L+        
Sbjct: 155 DGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLLLDKNQLQY------- 207

Query: 159 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 218
                        LPE             ++ A+ L V    L+++   L  +P  +   
Sbjct: 208 -------------LPET------------LSGASALEV----LAIDDNRLKKLPEALIYL 238

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
            ++T L  + N +QELPP++ S  +L  L +  N+++  P++I   L  L  L+L++N L
Sbjct: 239 KKLTFLFAAHNELQELPPQIGSSRNLVKLCVEHNQLQRLPESI-GQLQKLELLRLEHNQL 297

Query: 279 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           +Q+P + F  +  L+ L L  N +  LP N  F  L  L+ LYL   QL   P+ I   +
Sbjct: 298 KQLPKN-FGQLKALRKLYLDSNQLTVLPIN--FGELRALENLYLSDNQLTSLPSGIGNCK 354

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           +LR L L+ N++ S+P+    L  L EL ++DN I+ LP   G
Sbjct: 355 ELRELFLNNNAMTSLPDSMGTLYQLEELYMNDNQIANLPSSFG 397



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 175/403 (43%), Gaps = 42/403 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N L  L + L      L EL  S N L  +PE I  L  L RL +  N +  +P+
Sbjct: 106 LNLENNYLKELPDGLF-DLPYLEELRLSNNQLQYLPEKIKGLRNLRRLYIDGNELRMLPN 164

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKL-----------------------SKLGTLDLH 100
           +++    LA     NN L ++P  LGKL                       S L  L + 
Sbjct: 165 NLAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLLLDKNQLQYLPETLSGASALEVLAID 224

Query: 101 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 159
            N+LK+       L +L+ L  ++N L  LPP+IG    L KL +  N L+ L  S+   
Sbjct: 225 DNRLKKLPEALIYLKKLTFLFAAHNELQELPPQIGSSRNLVKLCVEHNQLQRLPESIGQL 284

Query: 160 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 219
               LL     RL  N+  +       L  +        ++L L+   L+ +P    E  
Sbjct: 285 QKLELL-----RLEHNQLKQLPKNFGQLKAL--------RKLYLDSNQLTVLPINFGELR 331

Query: 220 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
            +  L LS N +  LP  + +C  L+ L L+ N +   PD++ T L  L  L +++N + 
Sbjct: 332 ALENLYLSDNQLTSLPSGIGNCKELRELFLNNNAMTSLPDSMGT-LYQLEELYMNDNQIA 390

Query: 280 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
            +PS  F  +  L++L L+ N I  L E+   S    L  +YL     ++ P  +    Q
Sbjct: 391 NLPS-SFGGLKNLKLLFLTNNKINRLSEDLDCSGWKRLSAIYLENNAFQKLPKALETAPQ 449

Query: 339 LRILDLSQNSLQSIPEG-FKNLTSLTELDLSDNNISALPPELG 380
           L+ L L  N +  + +     +  +  + L+DN +S LP  +G
Sbjct: 450 LQTLYLDGNLISEVNDSIIIKMPKIEHISLNDNQLSELPDNMG 492



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 29/197 (14%)

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           + +   +I + +     + +LDLS +S+  L                        D+I  
Sbjct: 63  DAITYYSIETAMEVKDRVHRLDLSNDSLVSL-----------------------GDSI-R 98

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
               L  L L+NN L+++P DG  D+P L+ L LS N +  LPE      L +L+ LY+ 
Sbjct: 99  EFRHLFFLNLENNYLKELP-DGLFDLPYLEELRLSNNQLQYLPE--KIKGLRNLRRLYID 155

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
             +LR  P ++  +++L  +    N LQSIPE    L  L  L L  N +  LP  L   
Sbjct: 156 GNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLLLDKNQLQYLPETLS-G 214

Query: 383 EPSLQALRLDGNPLRSI 399
             +L+ L +D N L+ +
Sbjct: 215 ASALEVLAIDDNRLKKL 231


>gi|404371791|ref|ZP_10977093.1| hypothetical protein CSBG_00910 [Clostridium sp. 7_2_43FAA]
 gi|226912083|gb|EEH97284.1| hypothetical protein CSBG_00910 [Clostridium sp. 7_2_43FAA]
          Length = 632

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 196/393 (49%), Gaps = 29/393 (7%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L E+    N +N +PE I  L  L +L L +NR+  +P+ I     L    +  N+L++L
Sbjct: 121 LLEMNLDGNHINEIPEEIVKLESLDKLILSRNRLNKVPTYIGAMKKLRWLDVSKNSLTSL 180

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS-NNSLSGLPPEIGKMTTLRKLL 143
           P E+G +  L  LD+  N++KE   E   L+  +  L+  N L+  P +I  +  LR+L 
Sbjct: 181 PKEIGNIITLDRLDISQNKIKEIPSEINNLKKLIRLLAYENELTTFPSDIVGLPVLRELN 240

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N +  L  ++  G  P L+ YL  R+ EN+ +    +  +L  + T LSV + EL  
Sbjct: 241 LFNNMITELPDNI--GSFPELM-YL--RIGENKLTSLPESIGELEKLFT-LSVNNNEL-- 292

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
             +NL   P  I    ++T+++LS N ++ LP  +    S++ L L  N IK +PD    
Sbjct: 293 --INL---PDNIINLSKLTEINLSNNKLERLPDNIGRLTSVKELNLDNNNIKIFPD---- 343

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPM-LQILDLSYNIASLPENPPFSSLPHLQELYLR 322
            LS+L  LK        + +     +P  +Q +DLS N+  L   P   ++ HL   + +
Sbjct: 344 -LSNLVDLKTIYISNNNIINFEIDFLPTSVQYIDLSRNL--LTSVPIIENIKHLDLSFNK 400

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
              ++E    I  +  +  L L+ N ++++P+   ++ +LT ++LS+N +  +P E G L
Sbjct: 401 IENIQEG---IKSMNSISYLGLNGNLIKTLPKTIGDMITLTGINLSNNKLVEIPSEFGNL 457

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
             +LQ L L  N L  I  T+   G+   L++L
Sbjct: 458 -VNLQGLYLSNNELLEIPNTL---GSITALRFL 486



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 174/376 (46%), Gaps = 47/376 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  NK+  + +  I +   L  L+A +N L   P  I  L  L  L+L  N I  
Sbjct: 190 LDRLDISQNKIKEIPSE-INNLKKLIRLLAYENELTTFPSDIVGLPVLRELNLFNNMITE 248

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P +I     L    +G N L++LP  +G+L KL TL +++N+L         L +L+ +
Sbjct: 249 LPDNIGSFPELMYLRIGENKLTSLPESIGELEKLFTLSVNNNELINLPDNIINLSKLTEI 308

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +LSNN L  LP  IG++T++++L L  N ++           P L   +  +     ++ 
Sbjct: 309 NLSNNKLERLPDNIGRLTSVKELNLDNNNIKIF---------PDLSNLVDLKTIYISNNN 359

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
               + D +  + +    S+ L      L+++P  I E   I  LDLS N I+ +   + 
Sbjct: 360 IINFEIDFLPTSVQYIDLSRNL------LTSVP--IIE--NIKHLDLSFNKIENIQEGIK 409

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           S  S+  L L+ N IK  P  I   + +L+ + L NN L ++PS+               
Sbjct: 410 SMNSISYLGLNGNLIKTLPKTI-GDMITLTGINLSNNKLVEIPSE--------------- 453

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                     F +L +LQ LYL   +L E P  +  +  LR L L  N L  IP+    +
Sbjct: 454 ----------FGNLVNLQGLYLSNNELLEIPNTLGSITALRFLSLDNNRLTIIPKEIGTI 503

Query: 360 TSLTELDLSDNNISAL 375
             L ++DLS+N ++ L
Sbjct: 504 EKLKKVDLSNNYLTKL 519



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 23/155 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  LD+  NK+  +    I S   ++ L  + NL+  +P+TIG +  L  ++L  N+++ 
Sbjct: 391 IKHLDLSFNKIENIQEG-IKSMNSISYLGLNGNLIKTLPKTIGDMITLTGINLSNNKLVE 449

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IPS      +L   Y+ NN L  +P  LG ++ L                        L 
Sbjct: 450 IPSEFGNLVNLQGLYLSNNELLEIPNTLGSITAL----------------------RFLS 487

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
           L NN L+ +P EIG +  L+K+ L+ N L  L  S
Sbjct: 488 LDNNRLTIIPKEIGTIEKLKKVDLSNNYLTKLEFS 522



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 3/106 (2%)

Query: 285 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
           G   +P L  ++L  N I  +PE      L  L +L L R +L + PT I  +++LR LD
Sbjct: 114 GISYLPNLLEMNLDGNHINEIPE--EIVKLESLDKLILSRNRLNKVPTYIGAMKKLRWLD 171

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
           +S+NSL S+P+   N+ +L  LD+S N I  +P E+  L+  ++ L
Sbjct: 172 VSKNSLTSLPKEIGNIITLDRLDISQNKIKEIPSEINNLKKLIRLL 217


>gi|3894393|gb|AAC78596.1| Hcr2-5D [Solanum lycopersicum var. cerasiforme]
          Length = 1016

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 187/412 (45%), Gaps = 69/412 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 59
           +S+LD+  NKL+      I     LT L   +N LNG +P ++G+L+ L  L L+ N++ 
Sbjct: 385 LSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQLS 444

Query: 60  -SIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS 117
            SIP  I    SL E Y+GNN+L+  +PA LG L+ L  L L++NQL             
Sbjct: 445 GSIPEEIGYLSSLTELYLGNNSLNGSIPASLGNLNNLFMLYLYNNQLS------------ 492

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
                      +P EIG +++L +L L  N L        NG  PA L  L +       
Sbjct: 493 ---------GSIPEEIGYLSSLTELFLGNNSL--------NGSIPASLGNLNN------- 528

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS-IQELPP 236
                         +RL + + +LS       +IP+       +  L LS N  I E+P 
Sbjct: 529 -------------LSRLYLYNNQLS------GSIPASFGNMRNLQTLFLSDNDLIGEIPS 569

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPMLQIL 295
            + +  SL+ L +SRN +K      L ++S L  L + +N  R ++PS    ++  L+IL
Sbjct: 570 FVCNLTSLEVLYMSRNNLKGKVPQCLGNISDLHILSMSSNSFRGELPSS-ISNLTSLKIL 628

Query: 296 DLSYNI--ASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSL-QS 351
           D   N    ++P+   F ++  LQ   ++  +L    PT+      L  L+L  N L   
Sbjct: 629 DFGRNNLEGAIPQ--FFGNISSLQVFDMQNNKLSGTLPTNFSIGCSLISLNLHGNELADE 686

Query: 352 IPEGFKNLTSLTELDLSDNNIS-ALPPELGLLEPSLQALRLDGNPLRSIRRT 402
           IP    N   L  LDL DN ++   P  LG L P L+ LRL  N L    R+
Sbjct: 687 IPRSLDNCKKLQVLDLGDNQLNDTFPMWLGTL-PELRVLRLTSNKLHGPIRS 737



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 182/389 (46%), Gaps = 31/389 (7%)

Query: 25  LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALS 82
           LT+L    N L+G +P ++G+L+ L  L L+ N++  SIP  I    SL +  +G N LS
Sbjct: 217 LTKLSLDINFLSGSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTKLSLGINFLS 276

Query: 83  A-LPAELGKLSKLGTLDLHSNQLKEYCVEAC-QLR-LSVLDLSNNSLSG-LPPEIGKMTT 138
             +PA LG L+ L  LDL++N+L     E    LR L+ LDL  N+L+G +P  +G +  
Sbjct: 277 GSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNN 336

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRL 194
           L  L L  N L         G  P  + YLRS     L EN  + +       +   +RL
Sbjct: 337 LFMLYLYNNQLS--------GSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLSRL 388

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNK 253
            + + +LS       +IP EI     +T LDL  N++   +P  L +  +L  L L  N+
Sbjct: 389 DLYNNKLS------GSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLFMLYLYNNQ 442

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--IASLPENPPFS 311
           +       +  LSSL+ L L NN L         ++  L +L L  N    S+PE   + 
Sbjct: 443 LSGSIPEEIGYLSSLTELYLGNNSLNGSIPASLGNLNNLFMLYLYNNQLSGSIPEEIGY- 501

Query: 312 SLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSD 369
            L  L EL+L    L  + P  +  L  L  L L  N L  SIP  F N+ +L  L LSD
Sbjct: 502 -LSSLTELFLGNNSLNGSIPASLGNLNNLSRLYLYNNQLSGSIPASFGNMRNLQTLFLSD 560

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRS 398
           N++    P       SL+ L +  N L+ 
Sbjct: 561 NDLIGEIPSFVCNLTSLEVLYMSRNNLKG 589



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 179/394 (45%), Gaps = 29/394 (7%)

Query: 19  IASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYM 76
           I S   L  +    N LNG +PE IG L  L +L L  N +  SIP+S+    +L+  ++
Sbjct: 139 IGSLAKLQIIRIFNNHLNGFIPEEIGYLRSLTKLSLGINFLSGSIPASLGNMTNLSFLFL 198

Query: 77  GNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSG-LPPE 132
             N LS  +P E+G L  L  L L  N L      +      LS L L NN LSG +P E
Sbjct: 199 YENQLSGFIPEEIGYLRSLTKLSLDINFLSGSIPASLGNLNNLSFLYLYNNQLSGSIPEE 258

Query: 133 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR--SRLPENEDSEASTTKEDLITM 190
           IG + +L KL        +L  + ++G  PA L  L   SRL    +  + +  E++  +
Sbjct: 259 IGYLRSLTKL--------SLGINFLSGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYL 310

Query: 191 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLIL 249
            +   +   E +L G    +IP+ +     +  L L  N +   +P E+    SL  L L
Sbjct: 311 RSLTYLDLGENALNG----SIPASLGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTYLDL 366

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI--ASLPEN 307
             N +     A L +L++LS L L NN L     +    +  L  LDL  N    S+P  
Sbjct: 367 GENALNGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIP-- 424

Query: 308 PPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTEL 365
               +L +L  LYL   QL  + P +I  L  L  L L  NSL  SIP    NL +L  L
Sbjct: 425 ASLGNLNNLFMLYLYNNQLSGSIPEEIGYLSSLTELYLGNNSLNGSIPASLGNLNNLFML 484

Query: 366 DLSDNNISA-LPPELGLLEPSLQALRLDGNPLRS 398
            L +N +S  +P E+G L  SL  L L  N L  
Sbjct: 485 YLYNNQLSGSIPEEIGYLS-SLTELFLGNNSLNG 517



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSG-LPPEIG 134
           NN    +P E+G L+ L  LDL++NQ+            +L ++ + NN L+G +P EIG
Sbjct: 105 NNISGTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGFIPEEIG 164

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITM 190
            + +L KL        +L  + ++G  PA L  + +     L EN+ S     +   +  
Sbjct: 165 YLRSLTKL--------SLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGYLRS 216

Query: 191 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLIL 249
            T+LS+    LS       +IP+ +     ++ L L  N +   +P E+    SL  L L
Sbjct: 217 LTKLSLDINFLS------GSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLRSLTKLSL 270

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI--ASLPEN 307
             N +     A L +L++LS L L NN L     +    +  L  LDL  N    S+P  
Sbjct: 271 GINFLSGSIPASLGNLNNLSRLDLYNNKLSGSIPEEIGYLRSLTYLDLGENALNGSIP-- 328

Query: 308 PPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTEL 365
               +L +L  LYL   QL  + P +I  L+ L  LDL +N+L  SIP    NL +L+ L
Sbjct: 329 ASLGNLNNLFMLYLYNNQLSGSIPEEIGYLRSLTYLDLGENALNGSIPASLGNLNNLSRL 388

Query: 366 DLSDNNISA-LPPELGLLEPSLQALRLDGNPLRS 398
           DL +N +S  +P E+G L  SL  L L  N L  
Sbjct: 389 DLYNNKLSGSIPEEIGYLR-SLTYLDLGENALNG 421



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 134/307 (43%), Gaps = 47/307 (15%)

Query: 38  MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLG 95
           +P +I +L+ L  LD  +N +  +IP       SL  F M NN LS  LP        L 
Sbjct: 615 LPSSISNLTSLKILDFGRNNLEGAIPQFFGNISSLQVFDMQNNKLSGTLPTNFSIGCSLI 674

Query: 96  TLDLHSNQLKE---YCVEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRT 151
           +L+LH N+L +     ++ C+ +L VLDL +N L+   P  +G +  LR L LT N L  
Sbjct: 675 SLNLHGNELADEIPRSLDNCK-KLQVLDLGDNQLNDTFPMWLGTLPELRVLRLTSNKLHG 733

Query: 152 -LRSSLVNGPTPAL---------------------LKYLRSRLPENEDSEASTTKEDLIT 189
            +RSS      P L                     LK +R+     E+    +  +D + 
Sbjct: 734 PIRSSGAEIMFPDLRIIDLSRNAFSQDLPTSLFEHLKGMRTVDKTMEEPSYESYYDDSVV 793

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLI 248
           + T      K L LE + + ++          T +DLS N  +  +P  L    +++ L 
Sbjct: 794 VVT------KGLELEIVRILSL---------YTIIDLSSNKFEGHIPSVLGDLIAIRVLN 838

Query: 249 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI--ASLPE 306
           +S N ++ +  + L SLS L  L L  N L          +  L++L+LS+N     +P+
Sbjct: 839 VSHNALQGYIPSSLGSLSILESLDLSFNQLSGEIPQQLASLTFLEVLNLSHNYLQGCIPQ 898

Query: 307 NPPFSSL 313
            P F + 
Sbjct: 899 GPQFRTF 905



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 84/178 (47%), Gaps = 5/178 (2%)

Query: 223 KLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
            LDLS N+I   +PPE+ +  +L  L L+ N+I       + SL+ L  +++ NN L   
Sbjct: 99  NLDLSNNNISGTIPPEIGNLTNLVYLDLNTNQISGTIPPQIGSLAKLQIIRIFNNHLNGF 158

Query: 282 PSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLR 340
             +    +  L  L L  N  S        ++ +L  L+L   QL    P +I  L+ L 
Sbjct: 159 IPEEIGYLRSLTKLSLGINFLSGSIPASLGNMTNLSFLFLYENQLSGFIPEEIGYLRSLT 218

Query: 341 ILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGNPL 396
            L L  N L  SIP    NL +L+ L L +N +S  +P E+G L  SL  L L  N L
Sbjct: 219 KLSLDINFLSGSIPASLGNLNNLSFLYLYNNQLSGSIPEEIGYLR-SLTKLSLGINFL 275


>gi|291394839|ref|XP_002713745.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           [Oryctolagus cuniculus]
          Length = 858

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 184/404 (45%), Gaps = 24/404 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL ++ NKLT L+  +   +  + EL  + N L  +   I +   L  L L +N + +
Sbjct: 326 LEKLFLDHNKLTFLAVEMFQLFK-IKELQLADNKLELISHKIENFKELRVLILDKNLLKN 384

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  IS C  L    + +N LS LP  + KL  L  L ++ N + +   +   L ++  L
Sbjct: 385 IPEKISSCGMLECLSLSDNKLSDLPKTIYKLKNLRKLHVNRNNIVKIVEDISHLNKMCSL 444

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           + S N ++ +P EI     + K+ L  N +      L    +   L +  + + E     
Sbjct: 445 EFSGNLITDVPIEIKNCRKITKVELNYNKIIYFPEGLCALESLYYLSFSGNYISE----- 499

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                   I +    S     L+L    L      +     +  LDL +N I+++PP +S
Sbjct: 500 --------IPVDISFSNQLLHLALNQNKLLIFSEHLCSLINLRYLDLGKNQIKKVPPSVS 551

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              SL+ LIL  NK + +P  + T L +L  L    N L+ VPS+   ++  +Q L+ S 
Sbjct: 552 KMVSLRVLILYSNKFETFPVELCT-LENLQVLDFSENQLQTVPSE-ICNLKGIQKLNFSS 609

Query: 300 N-IASLPENPPFSSLPHLQELYLRRM---QLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           N     P       L  L+EL + ++   +L   P ++  + QL+ LD+S N+++ IP+ 
Sbjct: 610 NQFIYFP--VELCQLQSLEELNMSQINGRKLTRIPEELSNMTQLKNLDISNNAIREIPKK 667

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
              L SL  L   +N IS LPP    L  +LQ L L GN L ++
Sbjct: 668 MGELRSLVNLYAQNNQISYLPPSFLSLN-NLQQLNLSGNNLTAL 710



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 174/364 (47%), Gaps = 26/364 (7%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L   P+++  L +LI L+L  N I S+P  I     L + ++ +N L+ L  E+ +L 
Sbjct: 288 NQLTIFPKSLCFLPKLISLNLTGNLIESLPKEIRELKHLEKLFLDHNKLTFLAVEMFQLF 347

Query: 93  KLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
           K+  L L  N+L+   + +E  +  L VL L  N L  +P +I     L  L L+ N L 
Sbjct: 348 KIKELQLADNKLELISHKIENFK-ELRVLILDKNLLKNIPEKISSCGMLECLSLSDNKLS 406

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE--GMNL 208
            L  ++        LK LR         +    + +++ +   +S  +K  SLE  G  +
Sbjct: 407 DLPKTIYK------LKNLR---------KLHVNRNNIVKIVEDISHLNKMCSLEFSGNLI 451

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
           + +P EI    +ITK++L+ N I   P  L +  SL  L  S N I + P  I  S + L
Sbjct: 452 TDVPIEIKNCRKITKVELNYNKIIYFPEGLCALESLYYLSFSGNYISEIPVDISFS-NQL 510

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 327
             L L+ N L  + S+    +  L+ LDL  N I  +P  P  S +  L+ L L   +  
Sbjct: 511 LHLALNQNKLL-IFSEHLCSLINLRYLDLGKNQIKKVP--PSVSKMVSLRVLILYSNKFE 567

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
             P ++  L+ L++LD S+N LQ++P    NL  + +L+ S N     P EL  L+ SL+
Sbjct: 568 TFPVELCTLENLQVLDFSENQLQTVPSEICNLKGIQKLNFSSNQFIYFPVELCQLQ-SLE 626

Query: 388 ALRL 391
            L +
Sbjct: 627 ELNM 630



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 167/359 (46%), Gaps = 26/359 (7%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+S  ML  L  S N L+ +P+TI  L  L +L +++N I+ I   IS    +       
Sbjct: 389 ISSCGMLECLSLSDNKLSDLPKTIYKLKNLRKLHVNRNNIVKIVEDISHLNKMCSLEFSG 448

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N ++ +P E+    K+  ++L+ N++  +    C L  L  L  S N +S +P +I    
Sbjct: 449 NLITDVPIEIKNCRKITKVELNYNKIIYFPEGLCALESLYYLSFSGNYISEIPVDISFSN 508

Query: 138 TLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            L  L L  N L        SL+N      L+YL   L +N+  +   +   ++++   +
Sbjct: 509 QLLHLALNQNKLLIFSEHLCSLIN------LRYLD--LGKNQIKKVPPSVSKMVSLRVLI 560

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
             ++K            P E+     +  LD S N +Q +P E+ +   +Q L  S N+ 
Sbjct: 561 LYSNK--------FETFPVELCTLENLQVLDFSENQLQTVPSEICNLKGIQKLNFSSNQF 612

Query: 255 KDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
             +P  +  L SL  L+  +++   L ++P +   ++  L+ LD+S N I  +P+     
Sbjct: 613 IYFPVELCQLQSLEELNMSQINGRKLTRIPEE-LSNMTQLKNLDISNNAIREIPKK--MG 669

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
            L  L  LY +  Q+   P   L L  L+ L+LS N+L ++P    NL+SL E++  DN
Sbjct: 670 ELRSLVNLYAQNNQISYLPPSFLSLNNLQQLNLSGNNLTALPGAICNLSSLREINFDDN 728



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 35/265 (13%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+    L  L  ++N L    E + SL  L  LDL +N+I  +P S+S   SL    + +
Sbjct: 504 ISFSNQLLHLALNQNKLLIFSEHLCSLINLRYLDLGKNQIKKVPPSVSKMVSLRVLILYS 563

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N     P EL  L  L  LD   NQL+    E C L+ +  L+ S+N     P E+ ++ 
Sbjct: 564 NKFETFPVELCTLENLQVLDFSENQLQTVPSEICNLKGIQKLNFSSNQFIYFPVELCQLQ 623

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +L +L +          S +NG          +R+PE             ++  T+L   
Sbjct: 624 SLEELNM----------SQINGRK-------LTRIPEE------------LSNMTQL--- 651

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            K L +    +  IP ++ E   +  L    N I  LPP   S  +LQ L LS N +   
Sbjct: 652 -KNLDISNNAIREIPKKMGELRSLVNLYAQNNQISYLPPSFLSLNNLQQLNLSGNNLTAL 710

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P AI  +LSSL  +  D+NPL + P
Sbjct: 711 PGAI-CNLSSLREINFDDNPLLRPP 734



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 136/291 (46%), Gaps = 26/291 (8%)

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENE 176
            + L    L   P +I K+  ++ L L  N +RT +     G  P  L+ L    L ENE
Sbjct: 143 TVHLEAKGLQEFPQDILKIKYVKYLYLEKNQIRTFQ-----GTDPGDLRGLEILSLQENE 197

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            S         I +   L +    L++    ++ IP E+ + G I +L L+ N I+    
Sbjct: 198 LSSLPPE----IQLLHNLRI----LNVSHNQIAHIPKELSQLGNIRQLFLNNNYIETFLS 249

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           +L S  +L+ L L RNK++  PD  L SL +L  L L+ N L   P      +P L  L+
Sbjct: 250 DLESLGNLEILSLGRNKMRHIPDT-LPSLKNLKVLSLEYNQLTIFPK-SLCFLPKLISLN 307

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L+ N I SLP+      L HL++L+L   +L     ++ +L +++ L L+ N L+ I   
Sbjct: 308 LTGNLIESLPKE--IRELKHLEKLFLDHNKLTFLAVEMFQLFKIKELQLADNKLELISHK 365

Query: 356 FKNLTSLTELDLSDNNISALPPEL---GLLEPSLQALRLDGNPLRSIRRTI 403
            +N   L  L L  N +  +P ++   G+LE     L L  N L  + +TI
Sbjct: 366 IENFKELRVLILDKNLLKNIPEKISSCGMLE----CLSLSDNKLSDLPKTI 412



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/306 (23%), Positives = 125/306 (40%), Gaps = 52/306 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++K+++  NK+      L A    L  L  S N ++ +P  I   ++L+ L L+QN++L 
Sbjct: 464 ITKVELNYNKIIYFPEGLCA-LESLYYLSFSGNYISEIPVDISFSNQLLHLALNQNKLLI 522

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
               +    +L    +G N +  +P  + K+  L  L L+SN+ + + VE C L  L VL
Sbjct: 523 FSEHLCSLINLRYLDLGKNQIKKVPPSVSKMVSLRVLILYSNKFETFPVELCTLENLQVL 582

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNP-------------LRTLRSSLVNGPTPALLK 166
           D S N L  +P EI  +  ++KL  + N              L  L  S +NG       
Sbjct: 583 DFSENQLQTVPSEICNLKGIQKLNFSSNQFIYFPVELCQLQSLEELNMSQINGRK----- 637

Query: 167 YLRSRLPENEDSEASTTKEDLITMATR-----------------------------LSVT 197
              +R+PE   +       D+   A R                             LS+ 
Sbjct: 638 --LTRIPEELSNMTQLKNLDISNNAIREIPKKMGELRSLVNLYAQNNQISYLPPSFLSLN 695

Query: 198 S-KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
           + ++L+L G NL+A+P  I     + +++   N +   P E+     L T+     +  +
Sbjct: 696 NLQQLNLSGNNLTALPGAICNLSSLREINFDDNPLLRPPMEICKGKQLHTIACYLQRADE 755

Query: 257 WPDAIL 262
             + IL
Sbjct: 756 RDEKIL 761


>gi|195110491|ref|XP_001999813.1| GI22874 [Drosophila mojavensis]
 gi|193916407|gb|EDW15274.1| GI22874 [Drosophila mojavensis]
          Length = 1865

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 179/388 (46%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L+RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L    +EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-QELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+    SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLDLAQNLLETLPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCVNMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I  + +L  L++ +N+L+ +P      ++L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGNMTKLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLQELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 119/240 (49%), Gaps = 20/240 (8%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLQELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E    + L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLDLAQNLLETLPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSL---VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            L  L L  N L+ L  +L   VN     L +   S LP +            I   T+L
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNCVNMQELILTENFLSELPAS------------IGNMTKL 315

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
           S     L+++   L  +P EI +   +  L L  N +++LPPEL +C  L  L +S N++
Sbjct: 316 S----NLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQL 371



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 155/360 (43%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L++L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLQELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+    SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEIGGMVSLTDLDLAQNLLETL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +    ++  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCVNMQELILTENFLSELPAS--IGNMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 SNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG++++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCVNMQELILTENFLSELPASIGNMTKLSNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|161086957|ref|NP_766467.2| leucine-rich repeat and death domain-containing protein 1 [Mus
           musculus]
 gi|341940918|sp|Q8C0R9.2|LRRD1_MOUSE RecName: Full=Leucine-rich repeat and death domain-containing
           protein 1
 gi|187954881|gb|AAI41027.1| RIKEN cDNA 4932412H11 gene [Mus musculus]
 gi|219520514|gb|AAI45171.1| RIKEN cDNA 4932412H11 gene [Mus musculus]
          Length = 853

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 187/420 (44%), Gaps = 49/420 (11%)

Query: 6   VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
           ++ NKLT L+   I     + EL  + N L  +   I +   L  L+L +N + SIP  I
Sbjct: 327 MDHNKLTFLAVE-IFQLPKIKELHLADNKLEAISPKIENFKELRLLNLDKNLLQSIPKKI 385

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 124
           S C +L    + +N +  LP ++ KL  L  L ++ N++     E   L  + +L+ S N
Sbjct: 386 SHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSNIHILEFSGN 445

Query: 125 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 184
            ++ +P EI     + ++ L  N +      L    +   L +  + + E          
Sbjct: 446 QITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISE---------- 495

Query: 185 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 244
              I +    S     L L    L+     +     +  LDL++N I  +P  +S+  SL
Sbjct: 496 ---IPVDMSFSKQLLHLELNRNKLTVFSKHLCSLTNLEYLDLAKNQIMTIPSCISAMVSL 552

Query: 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL 304
             LILS NK + +P   L SL +L  L +  N L+++P +  K +  +Q L+LS NI + 
Sbjct: 553 HVLILSDNKFESFPKE-LCSLKNLRVLDISENKLQKIPLEISK-LKRIQKLNLSNNIFT- 609

Query: 305 PENPPFS--SLPHLQELYLRRM---QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
             N P     L  L+EL + +    +L   P ++  + QL+IL++S N+++ IP+    L
Sbjct: 610 --NFPVELCQLQTLEELNISQTSGKKLTRLPEEVSHMTQLKILNISNNAIKDIPKNIGEL 667

Query: 360 TSLT-----------------------ELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            SL                         LDL  NN++ALP  +  L  SL+ +  D NPL
Sbjct: 668 RSLVSFYASNNQISSLPSSFLSLEVLQSLDLRGNNMTALPSGIYKLS-SLKEINFDDNPL 726



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 185/397 (46%), Gaps = 47/397 (11%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
           AS N ++ +P+ +  L  + +L L+ N I ++PS +     L    +G N L+ +P  L 
Sbjct: 212 ASYNEISQIPKELLQLENMRQLLLNSNHIDTLPSGLEHLRYLETLSLGKNMLTYIPDSLS 271

Query: 90  KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
            L  L  L+L  NQL  +    C L +L+ L+L+ N +  LP E+ ++  L  LL+  N 
Sbjct: 272 SLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNLTGNMIGSLPKEVRELKNLESLLMDHNK 331

Query: 149 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN- 207
           L  L   +   P     K     L +N+    S   E+            KEL L  ++ 
Sbjct: 332 LTFLAVEIFQLP-----KIKELHLADNKLEAISPKIENF-----------KELRLLNLDK 375

Query: 208 --LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 265
             L +IP +I     +  L LS N+I+ELP ++    +L+ L ++RNK+    + I + L
Sbjct: 376 NLLQSIPKKISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEI-SHL 434

Query: 266 SSLSCLKLDNNPLRQVPSD------------GFKDI---PM----LQILD-LSYN---IA 302
           S++  L+   N +  VP +             + +I   P+    LQ LD LS+N   I+
Sbjct: 435 SNIHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYIS 494

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
            +P +  FS    L  L L R +L      +  L  L  LDL++N + +IP     + SL
Sbjct: 495 EIPVDMSFSK--QLLHLELNRNKLTVFSKHLCSLTNLEYLDLAKNQIMTIPSCISAMVSL 552

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
             L LSDN   + P EL  L+ +L+ L +  N L+ I
Sbjct: 553 HVLILSDNKFESFPKELCSLK-NLRVLDISENKLQKI 588



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 174/364 (47%), Gaps = 16/364 (4%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           KN+L  +P+++ SL  L  L+L  N++     S+     L    +  N + +LP E+ +L
Sbjct: 260 KNMLTYIPDSLSSLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNLTGNMIGSLPKEVREL 319

Query: 92  SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
             L +L +  N+L    VE  QL ++  L L++N L  + P+I     LR L L  N L+
Sbjct: 320 KNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAISPKIENFKELRLLNLDKNLLQ 379

Query: 151 TL---RSSLVNGPTPALLKYLRSRLPENEDS-----EASTTKEDLITMATRLSVTS--KE 200
           ++    S  VN  + +L       LP+         +    +  +ITM   +S  S    
Sbjct: 380 SIPKKISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSNIHI 439

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L   G  ++ +P EI    +IT+++L+ N+I   P  L +  SL  L  + N I + P  
Sbjct: 440 LEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVD 499

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           +  S   L  L+L+ N L  V S     +  L+ LDL+ N I ++P     S++  L  L
Sbjct: 500 MSFS-KQLLHLELNRNKL-TVFSKHLCSLTNLEYLDLAKNQIMTIPS--CISAMVSLHVL 555

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            L   +    P ++  L+ LR+LD+S+N LQ IP     L  + +L+LS+N  +  P EL
Sbjct: 556 ILSDNKFESFPKELCSLKNLRVLDISENKLQKIPLEISKLKRIQKLNLSNNIFTNFPVEL 615

Query: 380 GLLE 383
             L+
Sbjct: 616 CQLQ 619



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 197/440 (44%), Gaps = 25/440 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  NKL  +S   I ++  L  L   KNLL  +P+ I     L  L L  N I  
Sbjct: 345 IKELHLADNKLEAISPK-IENFKELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNIEE 403

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L + ++  N +  +  E+  LS +  L+   NQ+    +E    R ++ +
Sbjct: 404 LPKKIRKLKNLRQLHVNRNKMITMTEEISHLSNIHILEFSGNQITHVPIEIKNCRKITRV 463

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L+ N++   P  +  + +L  L   GN +  +   +        L+  R++L       
Sbjct: 464 ELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDMSFSKQLLHLELNRNKLTVFSKHL 523

Query: 180 ASTT--------KEDLITMATRLS--VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
            S T        K  ++T+ + +S  V+   L L      + P E+     +  LD+S N
Sbjct: 524 CSLTNLEYLDLAKNQIMTIPSCISAMVSLHVLILSDNKFESFPKELCSLKNLRVLDISEN 583

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFK 287
            +Q++P E+S    +Q L LS N   ++P  +  L +L  L+  +     L ++P +   
Sbjct: 584 KLQKIPLEISKLKRIQKLNLSNNIFTNFPVELCQLQTLEELNISQTSGKKLTRLPEE-VS 642

Query: 288 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
            +  L+IL++S N I  +P+N     L  L   Y    Q+   P+  L L+ L+ LDL  
Sbjct: 643 HMTQLKILNISNNAIKDIPKN--IGELRSLVSFYASNNQISSLPSSFLSLEVLQSLDLRG 700

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALP------PELGLLEPSLQ-ALRLDGNPLRSI 399
           N++ ++P G   L+SL E++  DN +   P       E+ ++   LQ A   D   L  I
Sbjct: 701 NNMTALPSGIYKLSSLKEINFDDNPLMRPPMEICKGKEMHMITCYLQRADERDEKILEKI 760

Query: 400 RRTILDRGTKAVLKYLKDKI 419
              + +  T+   ++L+ K+
Sbjct: 761 FNIVANSITETNFEFLQQKL 780



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 117/264 (44%), Gaps = 48/264 (18%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           LSL+   LS+IP EI     +  L+ S N I ++P EL    +++ L+L+ N I   P  
Sbjct: 187 LSLQENGLSSIPLEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLPSG 246

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-------------------- 300
            L  L  L  L L  N L  +P D    +  L+IL+L YN                    
Sbjct: 247 -LEHLRYLETLSLGKNMLTYIP-DSLSSLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNL 304

Query: 301 ----IASLPENP---------------------PFSSLPHLQELYLRRMQLREAPTDILR 335
               I SLP+                           LP ++EL+L   +L      I  
Sbjct: 305 TGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAISPKIEN 364

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
            ++LR+L+L +N LQSIP+   +  +L  L LSDNNI  LP ++  L+ +L+ L ++ N 
Sbjct: 365 FKELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNIEELPKKIRKLK-NLRQLHVNRNK 423

Query: 396 LRSIRRTILDRGTKAVLKYLKDKI 419
           + ++   I       +L++  ++I
Sbjct: 424 MITMTEEISHLSNIHILEFSGNQI 447


>gi|126659720|ref|ZP_01730848.1| hypothetical protein CY0110_23181 [Cyanothece sp. CCY0110]
 gi|126618968|gb|EAZ89709.1| hypothetical protein CY0110_23181 [Cyanothece sp. CCY0110]
          Length = 974

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 110/197 (55%), Gaps = 4/197 (2%)

Query: 222 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
           TKLDLS N I E+PPE++   SL+ L L  N+I + P  I   L SL  L L NN +  +
Sbjct: 19  TKLDLSYNQISEIPPEIAQLHSLRILYLHNNQISEIPPEI-AQLHSLEILDLHNNQISNI 77

Query: 282 PSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           P +  +   + Q+   +  I+S+P  P  + L  L++LYL   Q+   P +I +L  L+ 
Sbjct: 78  PPEIAQLHSLEQLYLYNNQISSIP--PEIAQLHSLEQLYLYNNQISNIPPEIAQLHSLQE 135

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
           L LS N + +IP     L SL +L LS+N IS +PPE+  L  SL+ L L  NPL    +
Sbjct: 136 LYLSNNQISNIPPEIAQLHSLEQLYLSNNQISNIPPEITQLH-SLEQLYLSNNPLNPELQ 194

Query: 402 TILDRGTKAVLKYLKDK 418
           +I ++G K +  YL+ +
Sbjct: 195 SIYEQGLKKLKIYLQSQ 211



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 96/211 (45%), Gaps = 37/211 (17%)

Query: 43  GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 102
             L +  +LDL  N+I  IP  I+   SL   Y+ NN +S +P E+ +L  L  LDLH+N
Sbjct: 13  AKLEKWTKLDLSYNQISEIPPEIAQLHSLRILYLHNNQISEIPPEIAQLHSLEILDLHNN 72

Query: 103 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 161
           Q+     E  QL  L  L L NN +S +PPEI ++ +L +L L  N +  +       P 
Sbjct: 73  QISNIPPEIAQLHSLEQLYLYNNQISSIPPEIAQLHSLEQLYLYNNQISNI------PPE 126

Query: 162 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 221
            A L  L                              +EL L    +S IP EI +   +
Sbjct: 127 IAQLHSL------------------------------QELYLSNNQISNIPPEIAQLHSL 156

Query: 222 TKLDLSRNSIQELPPELSSCASLQTLILSRN 252
            +L LS N I  +PPE++   SL+ L LS N
Sbjct: 157 EQLYLSNNQISNIPPEITQLHSLEQLYLSNN 187



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 85/153 (55%), Gaps = 2/153 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
            +KLD+  N+++ +    IA    L  L    N ++ +P  I  L  L  LDLH N+I +
Sbjct: 18  WTKLDLSYNQISEIPPE-IAQLHSLRILYLHNNQISEIPPEIAQLHSLEILDLHNNQISN 76

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           IP  I+   SL + Y+ NN +S++P E+ +L  L  L L++NQ+     E  QL  L  L
Sbjct: 77  IPPEIAQLHSLEQLYLYNNQISSIPPEIAQLHSLEQLYLYNNQISNIPPEIAQLHSLQEL 136

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
            LSNN +S +PPEI ++ +L +L L+ N +  +
Sbjct: 137 YLSNNQISNIPPEIAQLHSLEQLYLSNNQISNI 169



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 77/140 (55%), Gaps = 1/140 (0%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N ++ +P  I  L  L +L L+ N+I SIP  I+   SL + Y+ NN +S +P E+ +L 
Sbjct: 72  NQISNIPPEIAQLHSLEQLYLYNNQISSIPPEIAQLHSLEQLYLYNNQISNIPPEIAQLH 131

Query: 93  KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
            L  L L +NQ+     E  QL  L  L LSNN +S +PPEI ++ +L +L L+ NPL  
Sbjct: 132 SLQELYLSNNQISNIPPEIAQLHSLEQLYLSNNQISNIPPEITQLHSLEQLYLSNNPLNP 191

Query: 152 LRSSLVNGPTPALLKYLRSR 171
              S+       L  YL+S+
Sbjct: 192 ELQSIYEQGLKKLKIYLQSQ 211



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 94/191 (49%), Gaps = 15/191 (7%)

Query: 89  GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 147
            KL K   LDL  NQ+ E   E  QL  L +L L NN +S +PPEI ++ +L  L L  N
Sbjct: 13  AKLEKWTKLDLSYNQISEIPPEIAQLHSLRILYLHNNQISEIPPEIAQLHSLEILDLHNN 72

Query: 148 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 207
            +  +       P  A L  L      N  ++ S+   ++  + +      ++L L    
Sbjct: 73  QISNI------PPEIAQLHSLEQLYLYN--NQISSIPPEIAQLHSL-----EQLYLYNNQ 119

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           +S IP EI +   + +L LS N I  +PPE++   SL+ L LS N+I + P  I T L S
Sbjct: 120 ISNIPPEIAQLHSLQELYLSNNQISNIPPEIAQLHSLEQLYLSNNQISNIPPEI-TQLHS 178

Query: 268 LSCLKLDNNPL 278
           L  L L NNPL
Sbjct: 179 LEQLYLSNNPL 189


>gi|418727704|ref|ZP_13286292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959062|gb|EKO22839.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 356

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 154/330 (46%), Gaps = 42/330 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L+L   ++ ++P  I    +L    + NN    LP E+G+L  L  L+L +NQLK    E
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKE 112

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L  L LS N L+  P EIG++  L+KL L  N L TL   +        LK L+
Sbjct: 113 IGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEI------GQLKNLQ 166

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                                         +L+L+   L A+P+EI +   + +L LS N
Sbjct: 167 ------------------------------KLNLDKNRLKALPNEIGQLQNLQELYLSNN 196

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP E+    +LQ LIL  N++   P  I   L +L  L   NN L  +P +    +
Sbjct: 197 QLTILPEEIGQLKNLQALILGDNQLTILPKEI-GQLQNLKLLYSVNNELTILPQE-IGQL 254

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ L LS+N + +LP+      L +LQELYL   QL   P +I +L+ L+      N 
Sbjct: 255 QKLQYLYLSHNQLTTLPK--EIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQ 312

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L  +P+    L +L  L L++N +S+   E
Sbjct: 313 LTMLPQEIGQLQNLQWLKLNNNQLSSQEEE 342



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 145/305 (47%), Gaps = 63/305 (20%)

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
            L+ LP E+ +L  L +LDL +NQ K    E  QL+ L  L+L NN L  LP EIG++  
Sbjct: 59  KLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQN 118

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L+ L+L+ N L T          P  +  L++                            
Sbjct: 119 LQTLILSVNRLTTF---------PQEIGQLKNL--------------------------- 142

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L+L+   L+ +  EI +   + KL+L +N ++ LP E+    +LQ L LS N++   P
Sbjct: 143 QKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILP 202

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 318
           + I   L +L  L L +N L  +P    K+I  LQ L L Y++ +               
Sbjct: 203 EEI-GQLKNLQALILGDNQLTILP----KEIGQLQNLKLLYSVNN--------------- 242

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
                 +L   P +I +LQ+L+ L LS N L ++P+    L +L EL L+DN ++ LP E
Sbjct: 243 ------ELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKE 296

Query: 379 LGLLE 383
           +G L+
Sbjct: 297 IGQLK 301



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 149/300 (49%), Gaps = 24/300 (8%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS+  L+ LP EI ++  L+ L L  N  +TL   +        L    ++L 
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQL- 106

Query: 174 ENEDSEASTTK--EDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEIT 222
           +N   E    +  + LI    RL+   +E         L+L+   L+ +  EI +   + 
Sbjct: 107 KNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQ 166

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           KL+L +N ++ LP E+    +LQ L LS N++   P+ I   L +L  L L +N L  +P
Sbjct: 167 KLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEI-GQLKNLQALILGDNQLTILP 225

Query: 283 SDGFKDIPMLQILDLSYNIAS----LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
               K+I  LQ L L Y++ +    LP+      L  LQ LYL   QL   P +I +L+ 
Sbjct: 226 ----KEIGQLQNLKLLYSVNNELTILPQ--EIGQLQKLQYLYLSHNQLTTLPKEIGQLEN 279

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L+ L L+ N L ++P+    L +L      +N ++ LP E+G L+ +LQ L+L+ N L S
Sbjct: 280 LQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQ-NLQWLKLNNNQLSS 338



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 132/288 (45%), Gaps = 17/288 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++   KLT L    I     L  L  + N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 53  LNLSSQKLTTLPKE-IKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L    +  N L+  P E+G+L  L  L+L  NQL     E  QL+ L  L+L 
Sbjct: 112 EIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLD 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPENEDSE 179
            N L  LP EIG++  L++L L+ N L  L      L N     L     + LP+ E  +
Sbjct: 172 KNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPK-EIGQ 230

Query: 180 ASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
               K  L ++   L++  +E         L L    L+ +P EI +   + +L L+ N 
Sbjct: 231 LQNLK-LLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQ 289

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
           +  LP E+    +LQT I   N++   P  I   L +L  LKL+NN L
Sbjct: 290 LTTLPKEIGQLKNLQTFISFNNQLTMLPQEI-GQLQNLQWLKLNNNQL 336



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 5/197 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L+L    L+ +P EI +   +  LDL+ N  + LP E+    +LQ L
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQEL 99

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            L  N++K+ P  I   L +L  L L  N L   P +    +  LQ L+L YN + +L +
Sbjct: 100 NLWNNQLKNLPKEI-GQLQNLQTLILSVNRLTTFPQE-IGQLKNLQKLNLDYNQLTTLLQ 157

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L +LQ+L L + +L+  P +I +LQ L+ L LS N L  +PE    L +L  L 
Sbjct: 158 --EIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALI 215

Query: 367 LSDNNISALPPELGLLE 383
           L DN ++ LP E+G L+
Sbjct: 216 LGDNQLTILPKEIGQLQ 232


>gi|260803177|ref|XP_002596467.1| hypothetical protein BRAFLDRAFT_243711 [Branchiostoma floridae]
 gi|229281724|gb|EEN52479.1| hypothetical protein BRAFLDRAFT_243711 [Branchiostoma floridae]
          Length = 933

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 170/410 (41%), Gaps = 105/410 (25%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           +N L+ +PE  G L+ +  LDL  N+    PS+I     L E  +  N ++ +P  + KL
Sbjct: 5   QNELSSLPERFGLLTTIRVLDLRGNKFAVFPSAILSLTQLKELNISQNKIAVVPDNIEKL 64

Query: 92  SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL-- 149
            +L  L +  NQL                      S LP  +G ++ LR+L + GNPL  
Sbjct: 65  WQLTDLLMDHNQL----------------------SFLPETLGNLSQLRELRVQGNPLAC 102

Query: 150 -----RTLR--SSLVNGPTPALLK---YLRSRLPENEDSEASTTKEDLIT-MATRLSVTS 198
                + L+   SL  G    L +   Y  S LPE+        K +L+T M  R  + +
Sbjct: 103 VPECIKKLKRLQSLSLGNFLGLGQEDGYTISELPED------VAKLNLLTIMTVRGGILT 156

Query: 199 -----------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
                      KEL       + IP ++ E   + KL+L  N +  LP ++     L+T+
Sbjct: 157 SLPDTFGTLRLKELDFSFNLFAEIPKQVIEVSTLEKLNLCYNRLTNLPGDVHKLQKLKTM 216

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPEN 307
           IL  N+IK+ P + L  LS L  L LD+N                               
Sbjct: 217 ILYGNEIKELPPSAL-KLSRLVMLNLDHN------------------------------- 244

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                            QL   P DI +L+ L  L +S N++  +PEG   L SL  L++
Sbjct: 245 -----------------QLTTLPDDIGKLESLEYLLMSGNNMDFLPEGLCTLKSLFHLNI 287

Query: 368 SDNNISALPPELGLLEPSLQALR---LDGNPLRSIRRTILDRGTKAVLKY 414
           SDNN+  LP + G L P L++ R     GNPL    R I D G  A+  Y
Sbjct: 288 SDNNVEVLPADFGKL-PRLKSARHLHTHGNPLVQPPRRICDAGMVAIRSY 336



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 131/302 (43%), Gaps = 48/302 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++  NK+ V+ +N+   W  LT+L+   N L+ +PET+G+LS+L  L +  N +  
Sbjct: 44  LKELNISQNKIAVVPDNIEKLW-QLTDLLMDHNQLSFLPETLGNLSQLRELRVQGNPLAC 102

Query: 61  IPSSISGCCSLAEFYMGN---------NALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 111
           +P  I     L    +GN           +S LP ++ KL+ L  + +    L       
Sbjct: 103 VPECIKKLKRLQSLSLGNFLGLGQEDGYTISELPEDVAKLNLLTIMTVRGGILTSLPDTF 162

Query: 112 CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 171
             LRL  LD S N  + +P ++ +++TL KL L  N L  L      G    L K     
Sbjct: 163 GTLRLKELDFSFNLFAEIPKQVIEVSTLEKLNLCYNRLTNL-----PGDVHKLQKL---- 213

Query: 172 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 231
                                      K + L G  +  +P    +   +  L+L  N +
Sbjct: 214 ---------------------------KTMILYGNEIKELPPSALKLSRLVMLNLDHNQL 246

Query: 232 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 291
             LP ++    SL+ L++S N +   P+ + T L SL  L + +N +  +P+D F  +P 
Sbjct: 247 TTLPDDIGKLESLEYLLMSGNNMDFLPEGLCT-LKSLFHLNISDNNVEVLPAD-FGKLPR 304

Query: 292 LQ 293
           L+
Sbjct: 305 LK 306



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 5/153 (3%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD   N    +   +I   T L +L    N L  +P  +  L +L  + L+ N I  
Sbjct: 167 LKELDFSFNLFAEIPKQVIEVST-LEKLNLCYNRLTNLPGDVHKLQKLKTMILYGNEIKE 225

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P S      L    + +N L+ LP ++GKL  L  L +  N +       C L+ L  L
Sbjct: 226 LPPSALKLSRLVMLNLDHNQLTTLPDDIGKLESLEYLLMSGNNMDFLPEGLCTLKSLFHL 285

Query: 120 DLSNNSLSGLPPEIGKMTTL---RKLLLTGNPL 149
           ++S+N++  LP + GK+  L   R L   GNPL
Sbjct: 286 NISDNNVEVLPADFGKLPRLKSARHLHTHGNPL 318


>gi|198426048|ref|XP_002120095.1| PREDICTED: similar to leucine-rich repeats and IQ motif containing
           4 [Ciona intestinalis]
          Length = 599

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 194/426 (45%), Gaps = 75/426 (17%)

Query: 27  ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP- 85
           EL    N L  MP  +G L  L  L +  N++  +  +I+   +L    +  N    LP 
Sbjct: 160 ELHLEHNQLQCMPPELGCLVNLRILYMDNNKLEDVNDNIASLQNLISLDLSFNPSLNLPI 219

Query: 86  AELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           + + +L+ L  L L++  L E+  + C+  L L +L +SNN+L  LPPE+ ++  L++L 
Sbjct: 220 SSIARLANLTDLRLYNINLMEFPTKFCRSMLHLELLGISNNNLRNLPPEMERLKKLKELY 279

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           +  N        LV+ P                           I     L V    L L
Sbjct: 280 VENN-------QLVDFP-------------------------QCICSLANLKV----LDL 303

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI-- 261
           +G  +  IP ++     + +L L+RN++  LP  L    +LQ L L  N +   PD+I  
Sbjct: 304 DGNRIYRIPQQVAGLVSLNQLHLARNALTSLPDALCLLENLQLLDLGLNALSALPDSIQW 363

Query: 262 -------LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-----------IAS 303
                  + +L+SL  L LD+N L+ +P + F ++  L IL L+ N           + S
Sbjct: 364 LLHLPANICALTSLQMLALDDNELQDLP-EHFGNLKSLAILGLTGNQFEEFPLSLCSVTS 422

Query: 304 LP-------ENPPFSSLPH-------LQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
           L        +  PF+ +P        L+ELYL    L   P  +  L++LRI D+S N L
Sbjct: 423 LQKLYLGQDQGKPFTRIPEQVQYLKELEELYLDNNLLITLPHVLRHLKKLRIFDISNNRL 482

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTK 409
            ++P  F  +T L  + L +N++  LP E+   + SL+ L +  NP++   + + + G +
Sbjct: 483 STLPATFTEITWLHSIKLDNNDLDKLPEEIDTFK-SLKVLSVKNNPMQYPPKEVCENGLE 541

Query: 410 AVLKYL 415
           ++L ++
Sbjct: 542 SILAFI 547



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 104/216 (48%), Gaps = 26/216 (12%)

Query: 185 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 244
           E L T    L    K + L    L AIP E++E  E  +L L  N +Q +PPEL    +L
Sbjct: 122 ESLPTAEKVLRHKKKYIDLGNKQLDAIPEELYEFVETEELHLEHNQLQCMPPELGCLVNL 181

Query: 245 QTLILSRNKIKDWPDAI-----------------------LTSLSSLSCLKLDNNPLRQV 281
           + L +  NK++D  D I                       +  L++L+ L+L N  L + 
Sbjct: 182 RILYMDNNKLEDVNDNIASLQNLISLDLSFNPSLNLPISSIARLANLTDLRLYNINLMEF 241

Query: 282 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
           P+   + +  L++L +S N + +LP  P    L  L+ELY+   QL + P  I  L  L+
Sbjct: 242 PTKFCRSMLHLELLGISNNNLRNLP--PEMERLKKLKELYVENNQLVDFPQCICSLANLK 299

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           +LDL  N +  IP+    L SL +L L+ N +++LP
Sbjct: 300 VLDLDGNRIYRIPQQVAGLVSLNQLHLARNALTSLP 335



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 115/283 (40%), Gaps = 47/283 (16%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N L   P+ I SL+ L  LDL  NRI  IP  ++G  SL + ++  NAL++L
Sbjct: 275 LKELYVENNQLVDFPQCICSLANLKVLDLDGNRIYRIPQQVAGLVSLNQLHLARNALTSL 334

Query: 85  P----------AELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 133
           P               L+ L  L      L       C L  L +L L +N L  LP   
Sbjct: 335 PDALCLLENLQLLDLGLNALSALPDSIQWLLHLPANICALTSLQMLALDDNELQDLPEHF 394

Query: 134 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 193
           G + +L  L LTGN       SL +                             +T   +
Sbjct: 395 GNLKSLAILGLTGNQFEEFPLSLCS-----------------------------VTSLQK 425

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L +       +G   + IP ++    E+ +L L  N +  LP  L     L+   +S N+
Sbjct: 426 LYLGQD----QGKPFTRIPEQVQYLKELEELYLDNNLLITLPHVLRHLKKLRIFDISNNR 481

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPS--DGFKDIPMLQI 294
           +   P A  T ++ L  +KLDNN L ++P   D FK + +L +
Sbjct: 482 LSTLP-ATFTEITWLHSIKLDNNDLDKLPEEIDTFKSLKVLSV 523


>gi|348506994|ref|XP_003441042.1| PREDICTED: leucine-rich repeat-containing protein 1 [Oreochromis
           niloticus]
          Length = 524

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 172/372 (46%), Gaps = 21/372 (5%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL+   N L  +P+    L +L +L L  N I  IP+ I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQIIPAEIANFMQLVELDVSRNDILGI 97

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +     L   D   N L +      +LR L+ L +++ SL  LP  IG ++ L  L 
Sbjct: 98  PDSISHCKALQVADFSGNPLTKLPESFTELRNLTCLSINDISLQLLPGNIGNLSNLVSLE 157

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L  L  SL             S+L + E+ +    +   +  +    V+ K+L L
Sbjct: 158 LRENVLTFLPESL-------------SQLHKLEELDLGNNELYSLPQSIGHLVSLKDLWL 204

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +G +L+ IP+E+     +  LD+S N +++LP E+    SL  L++S+N I   P++I  
Sbjct: 205 DGNHLTEIPAELGNIKSLLCLDVSENKLEKLPEEMGGLVSLTDLLVSQNNIDSLPESI-G 263

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
            L  LS LK+D N L  +P +   +   L  L L+ N + SLP +     L  L  L   
Sbjct: 264 KLRKLSILKVDQNQLAYLP-ESIGNCESLSELVLTENQLQSLPRS--IGKLKRLFHLNCD 320

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
           R QL   P +I     L +  + +N L  IP      T L  LD+S N ++ LP  L  L
Sbjct: 321 RNQLLSLPKEIGGCSSLNVFCVRENRLTRIPSELSQATELHVLDVSGNRLTHLPLSLTTL 380

Query: 383 EPSLQALRLDGN 394
           +  L+AL L  N
Sbjct: 381 Q--LKALWLSEN 390



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 154/336 (45%), Gaps = 43/336 (12%)

Query: 70  SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSG 128
           SL E  +  N L  LP +  +L KL  L L  N+++    E A  ++L  LD+S N + G
Sbjct: 37  SLEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQIIPAEIANFMQLVELDVSRNDILG 96

Query: 129 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 188
           +P  I     L+    +GNPL                    ++LPE+             
Sbjct: 97  IPDSISHCKALQVADFSGNPL--------------------TKLPES------------F 124

Query: 189 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 248
           T    L+     LS+  ++L  +P  I     +  L+L  N +  LP  LS    L+ L 
Sbjct: 125 TELRNLTC----LSINDISLQLLPGNIGNLSNLVSLELRENVLTFLPESLSQLHKLEELD 180

Query: 249 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN 307
           L  N++   P +I   L SL  L LD N L ++P++   +I  L  LD+S N +  LPE 
Sbjct: 181 LGNNELYSLPQSI-GHLVSLKDLWLDGNHLTEIPAE-LGNIKSLLCLDVSENKLEKLPEE 238

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                L  L +L + +  +   P  I +L++L IL + QN L  +PE   N  SL+EL L
Sbjct: 239 --MGGLVSLTDLLVSQNNIDSLPESIGKLRKLSILKVDQNQLAYLPESIGNCESLSELVL 296

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           ++N + +LP  +G L+  L  L  D N L S+ + I
Sbjct: 297 TENQLQSLPRSIGKLK-RLFHLNCDRNQLLSLPKEI 331



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 165/374 (44%), Gaps = 48/374 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N++ ++    IA++  L EL  S+N + G+P++I     L   D   N +  
Sbjct: 61  LRKLGLSDNEIQIIPAE-IANFMQLVELDVSRNDILGIPDSISHCKALQVADFSGNPLTK 119

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S +   +L    + + +L  LP  +G LS L +L+L  N L        QL +L  L
Sbjct: 120 LPESFTELRNLTCLSINDISLQLLPGNIGNLSNLVSLELRENVLTFLPESLSQLHKLEEL 179

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS---RLPENE 176
           DL NN L  LP  IG + +L+ L L GN L  + + L N  +   L    +   +LPE  
Sbjct: 180 DLGNNELYSLPQSIGHLVSLKDLWLDGNHLTEIPAELGNIKSLLCLDVSENKLEKLPE-- 237

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
                        M   +S+T  +L +   N+ ++P  I +  +++ L + +N +  LP 
Sbjct: 238 ------------EMGGLVSLT--DLLVSQNNIDSLPESIGKLRKLSILKVDQNQLAYLPE 283

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
            + +C SL  L+L+ N+++  P +I   L  L  L  D N L  +P +            
Sbjct: 284 SIGNCESLSELVLTENQLQSLPRSI-GKLKRLFHLNCDRNQLLSLPKE------------ 330

Query: 297 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
                              L    +R  +L   P+++ +  +L +LD+S N L  +P   
Sbjct: 331 -------------IGGCSSLNVFCVRENRLTRIPSELSQATELHVLDVSGNRLTHLPLSL 377

Query: 357 KNLTSLTELDLSDN 370
             L  L  L LS+N
Sbjct: 378 TTL-QLKALWLSEN 390


>gi|124005855|ref|ZP_01690693.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988538|gb|EAY28179.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 410

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 154/333 (46%), Gaps = 19/333 (5%)

Query: 42  IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 101
           I   +RL  LDL+   +  +P  IS   +L    +  N +   P  L +LS L TL+L  
Sbjct: 67  IAPFARLQYLDLNNTELTELPPEISRLKNLTSINLAFNEIDEFPPVLTELSHLNTLNLSE 126

Query: 102 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 160
           N L     +   L +L  L L  N     P E+  +  L +L L  N L  L   +   P
Sbjct: 127 NYLSSLSFDIVHLHKLKTLHLGWNEFEEFPLEVLGLLKLEQLYLNENKLDKLPKEISELP 186

Query: 161 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 220
               L YL  R  E E      T   LI    +L  +   ++        +P EI +  +
Sbjct: 187 C---LTYLNLRWNEFEQFPIELT---LIAQLKKLKFSENWIN-------VLPPEIAQLQK 233

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
           + +L LS+ +++ +PPE++   +L+ L LS N++  +P+ +L  L  L  L L +N +  
Sbjct: 234 LEQLYLSKTNLEIVPPEIAQLRNLRMLDLSANQLDIFPEELL-ELYQLKQLNLAHNHVNS 292

Query: 281 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
           +P +G   +  L++L+L  N I +LP     + L HL++L L    L   P ++  L  L
Sbjct: 293 LP-EGIGQLTQLEVLELQGNYIKALPTE--ITQLQHLKKLSLNNNGLTHLPIEMGELVSL 349

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             L L QN LQ +PEG   L  L  L L++N+ 
Sbjct: 350 EYLALEQNCLQKLPEGLAQLNKLKVLKLANNDF 382



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 130/290 (44%), Gaps = 42/290 (14%)

Query: 115 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 174
           RL  LDL+N  L+ LPPEI ++  L  +                             L  
Sbjct: 72  RLQYLDLNNTELTELPPEISRLKNLTSI----------------------------NLAF 103

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
           NE  E      +L  + T        L+L    LS++  +I    ++  L L  N  +E 
Sbjct: 104 NEIDEFPPVLTELSHLNT--------LNLSENYLSSLSFDIVHLHKLKTLHLGWNEFEEF 155

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P E+     L+ L L+ NK+   P  I + L  L+ L L  N   Q P +    I  L+ 
Sbjct: 156 PLEVLGLLKLEQLYLNENKLDKLPKEI-SELPCLTYLNLRWNEFEQFPIE-LTLIAQLKK 213

Query: 295 LDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           L  S N I  LP  P  + L  L++LYL +  L   P +I +L+ LR+LDLS N L   P
Sbjct: 214 LKFSENWINVLP--PEIAQLQKLEQLYLSKTNLEIVPPEIAQLRNLRMLDLSANQLDIFP 271

Query: 354 EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           E    L  L +L+L+ N++++LP  +G L   L+ L L GN ++++   I
Sbjct: 272 EELLELYQLKQLNLAHNHVNSLPEGIGQL-TQLEVLELQGNYIKALPTEI 320



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 121/263 (46%), Gaps = 24/263 (9%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+N L+ +   I  L +L  L L  N     P  + G   L + Y+  N L  LP E+ +
Sbjct: 125 SENYLSSLSFDIVHLHKLKTLHLGWNEFEEFPLEVLGLLKLEQLYLNENKLDKLPKEISE 184

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN-- 147
           L  L  L+L  N+ +++ +E   + +L  L  S N ++ LPPEI ++  L +L L+    
Sbjct: 185 LPCLTYLNLRWNEFEQFPIELTLIAQLKKLKFSENWINVLPPEIAQLQKLEQLYLSKTNL 244

Query: 148 --------PLRTLR------SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 193
                    LR LR      + L   P   L  Y   +L  N       +  + I   T+
Sbjct: 245 EIVPPEIAQLRNLRMLDLSANQLDIFPEELLELYQLKQL--NLAHNHVNSLPEGIGQLTQ 302

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L V    L L+G  + A+P+EI +   + KL L+ N +  LP E+    SL+ L L +N 
Sbjct: 303 LEV----LELQGNYIKALPTEITQLQHLKKLSLNNNGLTHLPIEMGELVSLEYLALEQNC 358

Query: 254 IKDWPDAILTSLSSLSCLKLDNN 276
           ++  P+  L  L+ L  LKL NN
Sbjct: 359 LQKLPEG-LAQLNKLKVLKLANN 380



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 2/180 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL    N + VL    IA    L +L  SK  L  +P  I  L  L  LDL  N++  
Sbjct: 211 LKKLKFSENWINVLPPE-IAQLQKLEQLYLSKTNLEIVPPEIAQLRNLRMLDLSANQLDI 269

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
            P  +     L +  + +N +++LP  +G+L++L  L+L  N +K    E  QL+ L  L
Sbjct: 270 FPEELLELYQLKQLNLAHNHVNSLPEGIGQLTQLEVLELQGNYIKALPTEITQLQHLKKL 329

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L+NN L+ LP E+G++ +L  L L  N L+ L   L       +LK   +  PE E   
Sbjct: 330 SLNNNGLTHLPIEMGELVSLEYLALEQNCLQKLPEGLAQLNKLKVLKLANNDFPEKEKEH 389



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 116/260 (44%), Gaps = 41/260 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  NKL  L    I+    LT L    N     P  +  +++L +L   +N I  
Sbjct: 165 LEQLYLNENKLDKLPKE-ISELPCLTYLNLRWNEFEQFPIELTLIAQLKKLKFSENWINV 223

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I+    L + Y+    L  +P E+ +L  L  LDL +NQL  +  E  +L +L  L
Sbjct: 224 LPPEIAQLQKLEQLYLSKTNLEIVPPEIAQLRNLRMLDLSANQLDIFPEELLELYQLKQL 283

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L++N ++ LP  IG++T L  L L GN ++ L       PT                  
Sbjct: 284 NLAHNHVNSLPEGIGQLTQLEVLELQGNYIKAL-------PTE----------------- 319

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                   IT    L    K+LSL    L+ +P E+ E   +  L L +N +Q+LP  L+
Sbjct: 320 --------ITQLQHL----KKLSLNNNGLTHLPIEMGELVSLEYLALEQNCLQKLPEGLA 367

Query: 240 SCASLQTLILSRNKIKDWPD 259
               L+ L L+ N   D+P+
Sbjct: 368 QLNKLKVLKLANN---DFPE 384


>gi|386766567|ref|NP_001247318.1| scribbled, isoform K [Drosophila melanogaster]
 gi|383292966|gb|AFH06635.1| scribbled, isoform K [Drosophila melanogaster]
          Length = 2331

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|329664308|ref|NP_001192376.1| leucine-rich repeat and death domain-containing protein 1 [Bos
           taurus]
 gi|296488711|tpg|DAA30824.1| TPA: leucine-rich repeat and death domain-containing protein-like
           [Bos taurus]
          Length = 863

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 199/434 (45%), Gaps = 34/434 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M +L +  NKL V+SN  I ++  L  LI  KNLL  MPE I   + L  L L  N++  
Sbjct: 354 MKELQLTDNKLEVISNK-IENFKELRILILDKNLLKDMPENISHCAVLECLSLSDNKLTE 412

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSV 118
           +P +I    +L + ++  N L  +P  +  L+ + +L+   N + ++ +E  +C+  ++ 
Sbjct: 413 LPKNIHKLKNLRKLHINRNYLVKIPEYISHLNNMFSLEFSGNFITDFPIEIKSCK-NIAK 471

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           ++LS N +   P  +  + +L  L L GN +  +   +        L++  ++L    + 
Sbjct: 472 VELSYNKIMYFPLGLCALDSLHYLSLNGNYISEIPVDISFNKQLLHLEFNENKLLLFSEH 531

Query: 179 EASTTKEDLITMATRL----------SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
             S    + + +               V+   L L    L   P+E+     +  LDLS 
Sbjct: 532 LCSLINLEYLDLGKNKIRKIPPSISNMVSLHVLILCYNKLETFPTEVCTLDNLRVLDLSE 591

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGF 286
           N IQ +P E+ +   +Q L +S N+   +P  +  L SL  L+  +++   L ++P +  
Sbjct: 592 NQIQTIPSEICNLKGIQKLNISNNQFIYFPVELCHLQSLEELNISQINGKKLTRLPEE-L 650

Query: 287 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
            ++  L+ LD+S N I  +P N     L  L  L     Q+R  P+  L L  L+ L+LS
Sbjct: 651 SNMTKLKGLDISNNAIREMPTN--IGELRSLVSLNADNNQIRYLPSSFLSLNALQQLNLS 708

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL- 404
            N+L  +P G  NL SL E++  DN          LL P ++  +  G  L +I R +  
Sbjct: 709 GNNLSVLPSGIYNLFSLKEINFDDN---------PLLRPPMEICK--GKQLYTIARYLQR 757

Query: 405 --DRGTKAVLKYLK 416
             +R  K + K  K
Sbjct: 758 ADERDEKILAKIFK 771



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 184/407 (45%), Gaps = 38/407 (9%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+    + EL  + N +   P  + SL  L  L+L +N++  IP ++S   +L    +  
Sbjct: 233 ISQLGNIKELFLNNNCIEDFPSGLESLKNLEILNLAKNKLRHIPDALSSLKNLRALNLEY 292

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMT 137
           N L+  P  L  L KL +L+L  N +     E      L  L L +N L+ L  EI  + 
Sbjct: 293 NRLTIFPKALCFLPKLISLNLTGNLINSLPKEIKELKNLEKLLLDHNKLTFLAVEIFLLL 352

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALL---KYLRSRLPENEDSEA-----STTKEDLIT 189
            +++L LT N L  + + + N     +L   K L   +PEN    A     S +   L  
Sbjct: 353 KMKELQLTDNKLEVISNKIENFKELRILILDKNLLKDMPENISHCAVLECLSLSDNKLTE 412

Query: 190 MATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +   +      ++L +    L  IP  I     +  L+ S N I + P E+ SC ++  +
Sbjct: 413 LPKNIHKLKNLRKLHINRNYLVKIPEYISHLNNMFSLEFSGNFITDFPIEIKSCKNIAKV 472

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD----------GFKDIPML----- 292
            LS NKI  +P   L +L SL  L L+ N + ++P D           F +  +L     
Sbjct: 473 ELSYNKIMYFPLG-LCALDSLHYLSLNGNYISEIPVDISFNKQLLHLEFNENKLLLFSEH 531

Query: 293 -------QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
                  + LDL  N I  +P  P  S++  L  L L   +L   PT++  L  LR+LDL
Sbjct: 532 LCSLINLEYLDLGKNKIRKIP--PSISNMVSLHVLILCYNKLETFPTEVCTLDNLRVLDL 589

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           S+N +Q+IP    NL  + +L++S+N     P EL  L+ SL+ L +
Sbjct: 590 SENQIQTIPSEICNLKGIQKLNISNNQFIYFPVELCHLQ-SLEELNI 635



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 111/211 (52%), Gaps = 11/211 (5%)

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L   S +LS E    S +PS+ +       ++L    +QE P ++     ++ L L  N+
Sbjct: 125 LGKISPQLSEENQKGSGLPSDNF------TINLKAKGLQEFPKDILKVKYVKYLYLDENE 178

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 312
           IK +  A    +  L  L +  N L  +PS+  + +  L++L++SYN I+ +P+    S 
Sbjct: 179 IKSFKGADSRDMLGLEILSIQKNGLSTLPSE-IQLLHNLKLLNVSYNQISHIPK--EISQ 235

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L +++EL+L    + + P+ +  L+ L IL+L++N L+ IP+   +L +L  L+L  N +
Sbjct: 236 LGNIKELFLNNNCIEDFPSGLESLKNLEILNLAKNKLRHIPDALSSLKNLRALNLEYNRL 295

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           +  P  L  L P L +L L GN + S+ + I
Sbjct: 296 TIFPKALCFL-PKLISLNLTGNLINSLPKEI 325



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 110/218 (50%), Gaps = 25/218 (11%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           +S IP EI + G I +L L+ N I++ P  L S  +L+ L L++NK++  PDA L+SL +
Sbjct: 226 ISHIPKEISQLGNIKELFLNNNCIEDFPSGLESLKNLEILNLAKNKLRHIPDA-LSSLKN 284

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP----------------PF 310
           L  L L+ N L   P      +P L  L+L+ N I SLP+                   F
Sbjct: 285 LRALNLEYNRLTIFPK-ALCFLPKLISLNLTGNLINSLPKEIKELKNLEKLLLDHNKLTF 343

Query: 311 SSLPHLQELYLRRMQLREAPTDIL-----RLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
            ++     L ++ +QL +   +++       ++LRIL L +N L+ +PE   +   L  L
Sbjct: 344 LAVEIFLLLKMKELQLTDNKLEVISNKIENFKELRILILDKNLLKDMPENISHCAVLECL 403

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            LSDN ++ LP  +  L+ +L+ L ++ N L  I   I
Sbjct: 404 SLSDNKLTELPKNIHKLK-NLRKLHINRNYLVKIPEYI 440


>gi|332206768|ref|XP_003252466.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Nomascus leucogenys]
          Length = 860

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 182/385 (47%), Gaps = 23/385 (5%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           KN L  +P+T+ SL  L  L+L  N++   P ++     L    +  N +S+LP E+ +L
Sbjct: 266 KNKLRHIPDTLPSLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIREL 325

Query: 92  SKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
             L TL L  N+L    VE  Q LR+  L L++N L  +  +I     LR L+L  N L+
Sbjct: 326 KNLETLLLDHNKLTFLAVEIFQLLRIKELQLADNKLEVISHKIENFRELRILILDKNLLK 385

Query: 151 TLRSSLVNGPTPALLKYLR------SRLPENEDS-----EASTTKEDLITMATRLSVTSK 199
            +   +      A+L+ L       + LP+N        +    + +++ +   +S  + 
Sbjct: 386 NIPEKI---SCCAMLECLSLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSISHLNN 442

Query: 200 ELSLE--GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             SLE  G  ++ +P EI    +I K++LS N I   P  L +  SL  L ++ N I + 
Sbjct: 443 ICSLEFSGNIITGVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLNVNGNYISEI 502

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P  I  S   L  L+L  N L  + S+ F  +  L+ LDL  N I  +P     S++  L
Sbjct: 503 PVDISFS-KQLLHLELSENKLL-IFSEHFCSLINLKYLDLGKNQIKKIP--ASISNMISL 558

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L LR  +    P ++  L+ L++LDLS+N LQ I     NL  + +L+ S N     P
Sbjct: 559 HVLILRCNKFETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFP 618

Query: 377 PELGLLEPSLQALRLDGNPLRSIRR 401
            EL  L+ SL+ L +     R + R
Sbjct: 619 IELCQLQ-SLEQLNISQIKGRKLTR 642



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 172/376 (45%), Gaps = 20/376 (5%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
            S N ++ +P+ I  L  + +L  + N I + PS +    +L    +G N L  +P  L 
Sbjct: 218 VSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDTLP 277

Query: 90  KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
            L  L  L+L  NQL  +    C L +L  LDL+ N +S LP EI ++  L  LLL  N 
Sbjct: 278 SLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLLDHNK 337

Query: 149 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 208
           L  L   +       LL+    +L +N+    S   E+   +  R+ +  K L      L
Sbjct: 338 LTFLAVEIF-----QLLRIKELQLADNKLEVISHKIENFREL--RILILDKNL------L 384

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
             IP +I     +  L LS N + ELP  +    +L+ L ++RN +    D+I + L+++
Sbjct: 385 KNIPEKISCCAMLECLSLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSI-SHLNNI 443

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 327
             L+   N +  VP +  K+   +  ++LSYN I   P      +L  L  L +    + 
Sbjct: 444 CSLEFSGNIITGVPIE-IKNCQKIIKIELSYNKIMYFP--LGLCALDSLYYLNVNGNYIS 500

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
           E P DI   +QL  L+LS+N L    E F +L +L  LDL  N I  +P  +  +  SL 
Sbjct: 501 EIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNM-ISLH 559

Query: 388 ALRLDGNPLRSIRRTI 403
            L L  N   +  R +
Sbjct: 560 VLILRCNKFETFPREL 575



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 180/403 (44%), Gaps = 20/403 (4%)

Query: 6   VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
           ++ NKLT L+   I     + EL  + N L  +   I +   L  L L +N + +IP  I
Sbjct: 333 LDHNKLTFLAVE-IFQLLRIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKI 391

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 124
           S C  L    + +N L+ LP  + KL+ L  L ++ N + +       L  +  L+ S N
Sbjct: 392 SCCAMLECLSLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSISHLNNICSLEFSGN 451

Query: 125 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 184
            ++G+P EI     + K+ L+ N +      L    +   L YL   +  N  SE     
Sbjct: 452 IITGVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDS---LYYLN--VNGNYISE----- 501

Query: 185 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 244
              I +    S     L L    L            +  LDL +N I+++P  +S+  SL
Sbjct: 502 ---IPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISL 558

Query: 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 303
             LIL  NK + +P  + T L +L  L L  N L+++ SD   ++  +Q L+ S N    
Sbjct: 559 HVLILRCNKFETFPRELCT-LENLQVLDLSENQLQKISSD-ICNLKGIQKLNFSSNQFIH 616

Query: 304 LP-ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
            P E     SL  L    ++  +L   P ++  + QL+ LD+S N+++ IP     L +L
Sbjct: 617 FPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNL 676

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
             L   +N IS LPP L  L   LQ L L GN L ++   I +
Sbjct: 677 VSLHAYNNQISYLPPSLLSLN-DLQQLNLSGNNLTALPSAIYN 718



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 169/359 (47%), Gaps = 26/359 (7%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+   ML  L  S N L  +P+ I  L+ L +L +++N ++ I  SIS   ++       
Sbjct: 391 ISCCAMLECLSLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSISHLNNICSLEFSG 450

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++ +P E+    K+  ++L  N++  + +  C L  L  L+++ N +S +P +I    
Sbjct: 451 NIITGVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLNVNGNYISEIPVDISFSK 510

Query: 138 TLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            L  L L+ N L        SL+N      LKYL   L +N+  +   +  ++I++    
Sbjct: 511 QLLHLELSENKLLIFSEHFCSLIN------LKYL--DLGKNQIKKIPASISNMISLHV-- 560

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
                 L L        P E+     +  LDLS N +Q++  ++ +   +Q L  S N+ 
Sbjct: 561 ------LILRCNKFETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQF 614

Query: 255 KDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
             +P  +  L SL  L+  ++    L ++P +   ++  L+ LD+S N I  +P N    
Sbjct: 615 IHFPIELCQLQSLEQLNISQIKGRKLTRLPGE-LSNMTQLKELDISNNAIREIPRN--IG 671

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
            L +L  L+    Q+   P  +L L  L+ L+LS N+L ++P    NL SL E++  DN
Sbjct: 672 ELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSAIYNLFSLKEINFDDN 730



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 124/280 (44%), Gaps = 36/280 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L+V GN ++ +  ++  S  +L  L  S+N L    E   SL  L  LDL +N+I  IP+
Sbjct: 492 LNVNGNYISEIPVDISFSKQLL-HLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPA 550

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           SIS   SL    +  N     P EL  L  L  LDL  NQL++   + C L+ +  L+ S
Sbjct: 551 SISNMISLHVLILRCNKFETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFS 610

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N     P E+ ++ +L +L ++    R L                 +RLP         
Sbjct: 611 SNQFIHFPIELCQLQSLEQLNISQIKGRKL-----------------TRLPGE------- 646

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                ++  T+L    KEL +    +  IP  I E   +  L    N I  LPP L S  
Sbjct: 647 -----LSNMTQL----KELDISNNAIREIPRNIGELRNLVSLHAYNNQISYLPPSLLSLN 697

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
            LQ L LS N +   P AI  +L SL  +  D+NPL + P
Sbjct: 698 DLQQLNLSGNNLTALPSAIY-NLFSLKEINFDDNPLLRPP 736



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 25/225 (11%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L++   ++S IP EI + G I +L    N I+  P +L    +L+ L L +NK++  PD 
Sbjct: 216 LNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDT 275

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP----------- 308
            L SL +L  L L+ N L   P      +P L  LDL+ N I+SLP+             
Sbjct: 276 -LPSLKNLRVLNLEYNQLTIFPK-ALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLL 333

Query: 309 -----PFSSLPHLQELYLRRMQLREAPTDIL-----RLQQLRILDLSQNSLQSIPEGFKN 358
                 F ++   Q L ++ +QL +   +++       ++LRIL L +N L++IPE    
Sbjct: 334 DHNKLTFLAVEIFQLLRIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKISC 393

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L  L LSDN ++ LP  +  L  +L+ L ++ N +  I  +I
Sbjct: 394 CAMLECLSLSDNKLTELPKNIHKLN-NLRKLHVNRNNMVKITDSI 437



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 24/195 (12%)

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           ++L    +QE P ++     ++ L L +N+IK +  A    L  L  L L  N L  +PS
Sbjct: 146 VNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLPS 205

Query: 284 DGFKDIPMLQILDLSYN-IASLP-------------------ENPP--FSSLPHLQELYL 321
           +  + +  L+IL++S+N I+ +P                   EN P     L +L+ L L
Sbjct: 206 E-IQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSL 264

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGL 381
            + +LR  P  +  L+ LR+L+L  N L   P+    L  L  LDL+ N IS+LP E+  
Sbjct: 265 GKNKLRHIPDTLPSLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRE 324

Query: 382 LEPSLQALRLDGNPL 396
           L+ +L+ L LD N L
Sbjct: 325 LK-NLETLLLDHNKL 338


>gi|422002227|ref|ZP_16349465.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259159|gb|EKT88538.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 433

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 102/292 (34%), Positives = 147/292 (50%), Gaps = 34/292 (11%)

Query: 116 LSVLDL-------SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
           + VLDL       SN+ L+ LP EIGK+ +L++L+L  N L T+            L+YL
Sbjct: 140 VRVLDLQIREGENSNDPLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQ------LQYL 193

Query: 169 -RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
            R  L  N+ +      E L  +        +E+      L  +P EI     + KL LS
Sbjct: 194 QRLSLSFNQLTAIPKEIEQLQNL--------QEMDSNNNQLKTLPKEIGNLQHLQKLYLS 245

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            N I  LP E+ +   LQ L LS NKI   P  I  +L  L  L L+ N L  +P    K
Sbjct: 246 SNKITILPKEIGNLQHLQKLYLSSNKITILPKEI-GNLQKLEYLYLEVNKLTTLP----K 300

Query: 288 DIPMLQILDLSY----NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
           +I  L+ L + Y    N+A++P+     +L +LQ L L   +L   P +I  LQ L+ LD
Sbjct: 301 EIGQLRNLKVLYLDHNNLANIPKE--IGNLQNLQTLDLNNNKLTTLPKEIGNLQNLQTLD 358

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L+ N L ++P+   NL SL  LDLSDN +++ P E+G L+  L+ LRL+  P
Sbjct: 359 LNNNKLTTLPQEIGNLQSLESLDLSDNPLTSFPEEIGKLQ-HLKWLRLENIP 409



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 118/267 (44%), Gaps = 38/267 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     L ELI  KN L  +P+    L  L RL L  N++ +IP  I    +L E    N
Sbjct: 164 IGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNN 223

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP E+G L  L  L L SN++     E   L+ L  L LS+N ++ LP EIG + 
Sbjct: 224 NQLKTLPKEIGNLQHLQKLYLSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQ 283

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L TL         P  +  LR+                           
Sbjct: 284 KLEYLYLEVNKLTTL---------PKEIGQLRNL-------------------------- 308

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            K L L+  NL+ IP EI     +  LDL+ N +  LP E+ +  +LQTL L+ NK+   
Sbjct: 309 -KVLYLDHNNLANIPKEIGNLQNLQTLDLNNNKLTTLPKEIGNLQNLQTLDLNNNKLTTL 367

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSD 284
           P  I  +L SL  L L +NPL   P +
Sbjct: 368 PQEI-GNLQSLESLDLSDNPLTSFPEE 393



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 111/250 (44%), Gaps = 38/250 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N+LT +    I     L E+ ++ N L  +P+ IG+L  L +L L  N+I  
Sbjct: 193 LQRLSLSFNQLTAIPKE-IEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITI 251

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I     L + Y+ +N ++ LP E+G L KL  L L  N+L     E  QLR L VL
Sbjct: 252 LPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNKLTTLPKEIGQLRNLKVL 311

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +N+L+ +P EIG +  L+ L L  N L TL   + N      L+ L++         
Sbjct: 312 YLDHNNLANIPKEIGNLQNLQTLDLNNNKLTTLPKEIGN------LQNLQT--------- 356

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                L L    L+ +P EI     +  LDLS N +   P E+ 
Sbjct: 357 ---------------------LDLNNNKLTTLPQEIGNLQSLESLDLSDNPLTSFPEEIG 395

Query: 240 SCASLQTLIL 249
               L+ L L
Sbjct: 396 KLQHLKWLRL 405



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 77/149 (51%), Gaps = 2/149 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  NK+T+L    I +   L  L    N L  +P+ IG L  L  L L  N + +
Sbjct: 262 LQKLYLSSNKITILPKE-IGNLQKLEYLYLEVNKLTTLPKEIGQLRNLKVLYLDHNNLAN 320

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           IP  I    +L    + NN L+ LP E+G L  L TLDL++N+L     E   L+ L  L
Sbjct: 321 IPKEIGNLQNLQTLDLNNNKLTTLPKEIGNLQNLQTLDLNNNKLTTLPQEIGNLQSLESL 380

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
           DLS+N L+  P EIGK+  L+ L L   P
Sbjct: 381 DLSDNPLTSFPEEIGKLQHLKWLRLENIP 409


>gi|348555513|ref|XP_003463568.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like [Cavia porcellus]
          Length = 559

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 173/391 (44%), Gaps = 44/391 (11%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+N L  +P+ I +  +L  + L QN+    P  +    +L    +  N L ALP E+G 
Sbjct: 150 SRNCLEALPKEIVNQLKLREIYLQQNQFKVFPQELCVLPNLEIIDLDENKLRALPEEIGD 209

Query: 91  LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L++L  L +  NQL       C+ R ++VL++S+N L  LP   G++  + +L L+GN L
Sbjct: 210 LTRLQKLYVAHNQLPSLPRSLCRCRKMTVLEVSHNLLDSLPCAPGELPRMTELGLSGNCL 269

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
             +   +   P   LL YLR                              +  L G+  S
Sbjct: 270 GKVPRLVCRWPALHLL-YLR------------------------------DAGLRGLRRS 298

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
                     ++  LDL +N +   PP++ +   L+ L L  N I   P   L  LS L 
Sbjct: 299 -----FGRLLQLRFLDLGQNQLDRFPPQICALKDLEALALDDNNIGQLPSE-LGLLSKLK 352

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQIL---DLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
            L L  N     P + F    + ++    D    ++ LPE      L +L+ELY+    L
Sbjct: 353 ILGLTGNQFLSFPEEVFSLASLEKLYIGQDQGSKLSRLPEQ--IGKLQNLKELYIENNSL 410

Query: 327 REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
              P  +  + +L +LD   N L+ +P+       L EL L DN ++ LP  L  LE +L
Sbjct: 411 EYLPVSLGSMPKLEVLDCRHNLLKQLPDEICQAQGLRELLLEDNLLTCLPENLDSLE-NL 469

Query: 387 QALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           + L L  NP+++    +  +G +A+ +YL++
Sbjct: 470 KVLTLMNNPMKAPPIEVCAQGNEAMWRYLRE 500



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 151/344 (43%), Gaps = 25/344 (7%)

Query: 74  FYM--GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 130
           F++   N  L+A+P E+  L  L  + L +N+L+E   +   LR + +L L  N+L  L 
Sbjct: 28  FFIDTSNRNLTAIPPEILALEDLEEVHLENNRLEEISQDIQHLRHIRILYLDRNNLRELC 87

Query: 131 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 190
           PE+G ++ L  L L+ NPL      +++G     L+ LR    +  +      K      
Sbjct: 88  PELGALSNLEGLDLSCNPLNPSSLQVLSGLRA--LRELRLYHLDLRELPVVVCKHLHHLE 145

Query: 191 ATRLSVTS--------------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
              LS                 +E+ L+       P E+     +  +DL  N ++ LP 
Sbjct: 146 LLGLSRNCLEALPKEIVNQLKLREIYLQQNQFKVFPQELCVLPNLEIIDLDENKLRALPE 205

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+     LQ L ++ N++   P + L     ++ L++ +N L  +P     ++P +  L 
Sbjct: 206 EIGDLTRLQKLYVAHNQLPSLPRS-LCRCRKMTVLEVSHNLLDSLPC-APGELPRMTELG 263

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           LS N +  +P        P L  LYLR   LR       RL QLR LDL QN L   P  
Sbjct: 264 LSGNCLGKVPR--LVCRWPALHLLYLRDAGLRGLRRSFGRLLQLRFLDLGQNQLDRFPPQ 321

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
              L  L  L L DNNI  LP ELGLL   L+ L L GN   S 
Sbjct: 322 ICALKDLEALALDDNNIGQLPSELGLLS-KLKILGLTGNQFLSF 364



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 134/283 (47%), Gaps = 13/283 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL V  N+L  L  +L     M T L  S NLL+ +P   G L R+  L L  N +  
Sbjct: 213 LQKLYVAHNQLPSLPRSLCRCRKM-TVLEVSHNLLDSLPCAPGELPRMTELGLSGNCLGK 271

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  +    +L   Y+ +  L  L    G+L +L  LDL  NQL  +  + C L+ L  L
Sbjct: 272 VPRLVCRWPALHLLYLRDAGLRGLRRSFGRLLQLRFLDLGQNQLDRFPPQICALKDLEAL 331

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +N++  LP E+G ++ L+ L LTGN   +    +      +L    +  + +++ S+
Sbjct: 332 ALDDNNIGQLPSELGLLSKLKILGLTGNQFLSFPEEVF-----SLASLEKLYIGQDQGSK 386

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            S   E +  +        KEL +E  +L  +P  +    ++  LD   N +++LP E+ 
Sbjct: 387 LSRLPEQIGKLQ-----NLKELYIENNSLEYLPVSLGSMPKLEVLDCRHNLLKQLPDEIC 441

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
               L+ L+L  N +   P+  L SL +L  L L NNP++  P
Sbjct: 442 QAQGLRELLLEDNLLTCLPEN-LDSLENLKVLTLMNNPMKAPP 483



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 1/106 (0%)

Query: 7   EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 66
           +G+KL+ L    I     L EL    N L  +P ++GS+ +L  LD   N +  +P  I 
Sbjct: 383 QGSKLSRLPEQ-IGKLQNLKELYIENNSLEYLPVSLGSMPKLEVLDCRHNLLKQLPDEIC 441

Query: 67  GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 112
               L E  + +N L+ LP  L  L  L  L L +N +K   +E C
Sbjct: 442 QAQGLRELLLEDNLLTCLPENLDSLENLKVLTLMNNPMKAPPIEVC 487


>gi|260783004|ref|XP_002586569.1| hypothetical protein BRAFLDRAFT_249144 [Branchiostoma floridae]
 gi|229271686|gb|EEN42580.1| hypothetical protein BRAFLDRAFT_249144 [Branchiostoma floridae]
          Length = 469

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 202/441 (45%), Gaps = 40/441 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L V+ N L+ +  + I +   L  L   +N L  +P  I +L  L  L +  N    
Sbjct: 44  LQVLVVDNNSLSYVHQS-IVTLVNLGYLSFQRNQLAKLPNGISNLRSLHGLFIQGNSFTE 102

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  +    +L    +G+N +  LP  +  L++L  L +   Q  E+ ++  QL  L  L
Sbjct: 103 VPEEVCSLLNLQWLGVGDNTIRRLPDNIVHLTRLKILSITGCQFDEFPLQVLQLMSLEQL 162

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNP-------------LRTLRSSLVNGPTPALLK 166
            + +  LS +P ++ K   ++ L+L  N              L+TL  S  N P    + 
Sbjct: 163 FMGSRKLSSIPDKVLKQKNIQCLILRDNKIKKISKKISKFEYLQTLDVS--NNPDLRFIP 220

Query: 167 YLRSRLPEN-----EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 221
                LP+      E+    +  +DL  + T  S     L+L+G  LSA+ SEI +   +
Sbjct: 221 KQIGDLPKLYNLHLENCGLESLPDDLYNLQTLGS-----LNLKGNKLSALSSEISKLQSL 275

Query: 222 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI-LTSLSSL--SCLKLDNNPL 278
            +L +  N   +LP E+ + A+L+ L   +N +   PD + + +L SL  SC + +  P 
Sbjct: 276 RQLFIDNNQFMDLPEEICTLANLEVLGCGQNLLTRLPDKLTILNLKSLTISCCRFEEFP- 334

Query: 279 RQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRM---QLREAPTDILR 335
           RQV S G      L+ L +     S   +P    + HLQ L L  +   +L   P  I+ 
Sbjct: 335 RQVLSLG-----SLERLYIGGWAGSNTYSPIPEGIAHLQNLRLLAVDHSELASLPQGIVY 389

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           LQ L+ LDLS N   ++P    +L +L  L +  N I+ LP ELG L P L+ + +  NP
Sbjct: 390 LQMLQELDLSMNLFTAVPPEVLSLPNLVSLFMVGNQITRLPVELGRL-PGLEDVVVFDNP 448

Query: 396 LRSIRRTILDRGTKAVLKYLK 416
           L      I   G+ A++K+L+
Sbjct: 449 LEYPPEDICKEGSDAIIKFLR 469



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 156/364 (42%), Gaps = 28/364 (7%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL    +  IP  +     L +  +  N L+++PAE+G L KL  L + +N L      
Sbjct: 1   LDLSNKGLTFIPPQVFHLVDLEKLILSKNYLTSIPAEIGALRKLQVLVVDNNSLSYVHQS 60

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---RSSLVNGPTPALLK 166
              L  L  L    N L+ LP  I  + +L  L + GN    +     SL+N     +  
Sbjct: 61  IVTLVNLGYLSFQRNQLAKLPNGISNLRSLHGLFIQGNSFTEVPEEVCSLLNLQWLGVGD 120

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
               RLP+N            I   TRL +    LS+ G      P ++ +   + +L +
Sbjct: 121 NTIRRLPDN------------IVHLTRLKI----LSITGCQFDEFPLQVLQLMSLEQLFM 164

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP-LRQVPSDG 285
               +  +P ++    ++Q LIL R+         ++    L  L + NNP LR +P   
Sbjct: 165 GSRKLSSIPDKVLKQKNIQCLIL-RDNKIKKISKKISKFEYLQTLDVSNNPDLRFIPKQ- 222

Query: 286 FKDIPMLQILDL-SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
             D+P L  L L +  + SLP++    +L  L  L L+  +L    ++I +LQ LR L +
Sbjct: 223 IGDLPKLYNLHLENCGLESLPDD--LYNLQTLGSLNLKGNKLSALSSEISKLQSLRQLFI 280

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL 404
             N    +PE    L +L  L    N ++ LP +L +L  +L++L +         R +L
Sbjct: 281 DNNQFMDLPEEICTLANLEVLGCGQNLLTRLPDKLTIL--NLKSLTISCCRFEEFPRQVL 338

Query: 405 DRGT 408
             G+
Sbjct: 339 SLGS 342


>gi|281362655|ref|NP_001163746.1| scribbled, isoform L [Drosophila melanogaster]
 gi|272477196|gb|ACZ95040.1| scribbled, isoform L [Drosophila melanogaster]
          Length = 2585

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|301103829|ref|XP_002901000.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262101338|gb|EEY59390.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1178

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 164/354 (46%), Gaps = 41/354 (11%)

Query: 42  IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 101
           +G L  L  L L  N+++ +P SI  C  L    + NN LS+L  E+  L+ L  + LH 
Sbjct: 345 VGLLEHLQVLRLSNNQLVEVPKSIEKCSHLTLLDISNNQLSSLSDEISALTSLHRMILHH 404

Query: 102 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL-------- 152
           N L E       L  L  LDL++NSL  LP  IG +  L+ L L  N LR L        
Sbjct: 405 NALHELPEAIGNLEMLQELDLAHNSLVTLPESIGMLRNLKTLTLVSNQLRLLPNEFGSLS 464

Query: 153 ---RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
                 L N P    L+     LP  E   AS+    ++T A          SL+ +  S
Sbjct: 465 QLRHLDLDNNPKLITLEAFFRHLPSVEFLSASSC--GIVTFA----------SLDFLKDS 512

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCA---SLQTLILSRNKIKDWPDAILTSLS 266
            +           KL L+ N++QE P  +   A   +LQ L LS + +   P A+L   S
Sbjct: 513 PVE----------KLRLNHNALQEFPLLIGHAAMQDTLQELDLSDSHLTQVPLAVLLYCS 562

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
            L    L +N LR +P++    +  L++L+LS N + +LP+    + LP L++L     Q
Sbjct: 563 HLQYFDLSSNSLRVLPTE-IGHLRRLEVLNLSSNTLQALPDE--LTQLPRLRQLKCDHNQ 619

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
           L + P  +  L QL  L++S N L+S+P     +T L  L  SDN ++  PP L
Sbjct: 620 LGQLPLRLGNLVQLTKLNVSFNRLRSMPTSLMEMTQLQSLYASDNLMATPPPAL 673



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 179/450 (39%), Gaps = 113/450 (25%)

Query: 22  WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           W +  L  L+ S+N L  +P  I  L  L  LD+  N++  +PS +    SL      +N
Sbjct: 238 WNLQYLKSLVLSRNCLTRIPSGIQDLIHLEELDVSFNQLTRLPSCLQTTTSLTSICASHN 297

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRL-----------------SVLDLS 122
            +     +L KL ++  LDL  N+LKE       L+L                  VL LS
Sbjct: 298 LIQTFSPKLWKLREIRYLDLSYNRLKELPFVEGDLKLLRETGEWQVGVGLLEHLQVLRLS 357

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN L  +P  I K + L  L ++ N L +L                              
Sbjct: 358 NNQLVEVPKSIEKCSHLTLLDISNNQLSSL------------------------------ 387

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
              D I+  T L      + L    L  +P  I     + +LDL+ NS+  LP  +    
Sbjct: 388 --SDEISALTSL----HRMILHHNALHELPEAIGNLEMLQELDLAHNSLVTLPESIGMLR 441

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP--------LRQVPS----------- 283
           +L+TL L  N+++  P+    SLS L  L LDNNP         R +PS           
Sbjct: 442 NLKTLTLVSNQLRLLPNE-FGSLSQLRHLDLDNNPKLITLEAFFRHLPSVEFLSASSCGI 500

Query: 284 ------DGFKDIPMLQILDLSYNIASLPENP-------------------------PFSS 312
                 D  KD P ++ L L++N  +L E P                         P + 
Sbjct: 501 VTFASLDFLKDSP-VEKLRLNHN--ALQEFPLLIGHAAMQDTLQELDLSDSHLTQVPLAV 557

Query: 313 L---PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
           L    HLQ   L    LR  PT+I  L++L +L+LS N+LQ++P+    L  L +L    
Sbjct: 558 LLYCSHLQYFDLSSNSLRVLPTEIGHLRRLEVLNLSSNTLQALPDELTQLPRLRQLKCDH 617

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSI 399
           N +  LP  LG L   L  L +  N LRS+
Sbjct: 618 NQLGQLPLRLGNL-VQLTKLNVSFNRLRSM 646



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 150/323 (46%), Gaps = 45/323 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N+L+ LS+  I++ T L  +I   N L+ +PE IG+L  L  LDL  N ++++P 
Sbjct: 377 LDISNNQLSSLSDE-ISALTSLHRMILHHNALHELPEAIGNLEMLQELDLAHNSLVTLPE 435

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
           SI    +L    + +N L  LP E G LS+L  LDL +N  K   +EA    L  ++  +
Sbjct: 436 SIGMLRNLKTLTLVSNQLRLLPNEFGSLSQLRHLDLDNNP-KLITLEAFFRHLPSVEFLS 494

Query: 124 NSLSGLPP----EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            S  G+      +  K + + KL L  N L+           P L+ +            
Sbjct: 495 ASSCGIVTFASLDFLKDSPVEKLRLNHNALQEF---------PLLIGH------------ 533

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIP-SEIWEAGEITKLDLSRNSIQELPPEL 238
                         +  T +EL L   +L+ +P + +     +   DLS NS++ LP E+
Sbjct: 534 ------------AAMQDTLQELDLSDSHLTQVPLAVLLYCSHLQYFDLSSNSLRVLPTEI 581

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
                L+ L LS N ++  PD  LT L  L  LK D+N L Q+P     ++  L  L++S
Sbjct: 582 GHLRRLEVLNLSSNTLQALPDE-LTQLPRLRQLKCDHNQLGQLPL-RLGNLVQLTKLNVS 639

Query: 299 YN-IASLPENPPFSSLPHLQELY 320
           +N + S+P +     +  LQ LY
Sbjct: 640 FNRLRSMPTS--LMEMTQLQSLY 660



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 176/402 (43%), Gaps = 65/402 (16%)

Query: 42  IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 101
           I +L  L  L L +N +  IPS I     L E  +  N L+ LP+ L   + L ++    
Sbjct: 237 IWNLQYLKSLVLSRNCLTRIPSGIQDLIHLEELDVSFNQLTRLPSCLQTTTSLTSICASH 296

Query: 102 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 160
           N ++ +  +  +LR +  LDLS N L  LP   G +  LR+   TG     +        
Sbjct: 297 NLIQTFSPKLWKLREIRYLDLSYNRLKELPFVEGDLKLLRE---TGEWQVGV-------- 345

Query: 161 TPALLKYLRS-RLPENEDSEASTTKEDLITMA------TRLSVTSKELS---------LE 204
              LL++L+  RL  N+  E   + E    +        +LS  S E+S         L 
Sbjct: 346 --GLLEHLQVLRLSNNQLVEVPKSIEKCSHLTLLDISNNQLSSLSDEISALTSLHRMILH 403

Query: 205 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 264
              L  +P  I     + +LDL+ NS+  LP  +    +L+TL L  N+++  P+    S
Sbjct: 404 HNALHELPEAIGNLEMLQELDLAHNSLVTLPESIGMLRNLKTLTLVSNQLRLLPNE-FGS 462

Query: 265 LSSLSCLKLDNNP--------LRQVPS-----------------DGFKDIPMLQILDLSY 299
           LS L  L LDNNP         R +PS                 D  KD P ++ L L++
Sbjct: 463 LSQLRHLDLDNNPKLITLEAFFRHLPSVEFLSASSCGIVTFASLDFLKDSP-VEKLRLNH 521

Query: 300 NIASLPENP----PFSSLPHLQELYLRRMQLREAPTDI-LRLQQLRILDLSQNSLQSIPE 354
           N  +L E P      +    LQEL L    L + P  + L    L+  DLS NSL+ +P 
Sbjct: 522 N--ALQEFPLLIGHAAMQDTLQELDLSDSHLTQVPLAVLLYCSHLQYFDLSSNSLRVLPT 579

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
              +L  L  L+LS N + ALP EL  L P L+ L+ D N L
Sbjct: 580 EIGHLRRLEVLNLSSNTLQALPDELTQL-PRLRQLKCDHNQL 620



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 18/218 (8%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L++ G++   + S IW    +  L LSRN +  +P  +     L+ L +S N++   P  
Sbjct: 223 LNMSGLDAWKLSSRIWNLQYLKSLVLSRNCLTRIPSGIQDLIHLEELDVSFNQLTRLPSC 282

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP----------ENPP 309
           + T+ +SL+ +   +N L Q  S     +  ++ LDLSYN +  LP          E   
Sbjct: 283 LQTT-TSLTSICASHN-LIQTFSPKLWKLREIRYLDLSYNRLKELPFVEGDLKLLRETGE 340

Query: 310 FSS----LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
           +      L HLQ L L   QL E P  I +   L +LD+S N L S+ +    LTSL  +
Sbjct: 341 WQVGVGLLEHLQVLRLSNNQLVEVPKSIEKCSHLTLLDISNNQLSSLSDEISALTSLHRM 400

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            L  N +  LP  +G LE  LQ L L  N L ++  +I
Sbjct: 401 ILHHNALHELPEAIGNLE-MLQELDLAHNSLVTLPESI 437


>gi|255070543|ref|XP_002507353.1| u-box domain/leucine-rich repeat protein [Micromonas sp. RCC299]
 gi|226522628|gb|ACO68611.1| u-box domain/leucine-rich repeat protein [Micromonas sp. RCC299]
          Length = 426

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 122/240 (50%), Gaps = 37/240 (15%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 82
           + L +L  S+N L  +P  IG L+ L++L LH NR+ S+P+ I    SL   ++ +N L+
Sbjct: 213 SALRKLSLSRNRLTSVPAEIGQLTSLVKLYLHDNRLTSVPAEIGQLTSLEGLWLRHNQLT 272

Query: 83  ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 141
           +LPAE+G+L+ L  L L+ NQL     E  QL  L+ L L++N L+ +P EIG++T+L +
Sbjct: 273 SLPAEIGQLTALRVLLLYGNQLTSVPAEIGQLTSLTELHLADNQLTSVPAEIGQLTSLER 332

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 201
           L L  N L ++         PA +  L S                            + L
Sbjct: 333 LGLRDNQLTSV---------PAEIGQLTS---------------------------LERL 356

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
            L G  L+++P+EI +  E+ +L+L  N +  +P E+    SL+ L L  N++   P  I
Sbjct: 357 YLGGNRLTSVPAEIGQLTELKELNLEGNQLTSVPAEIGQLTSLERLYLGHNQLTSVPAVI 416



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 120/239 (50%), Gaps = 13/239 (5%)

Query: 163 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS-AIPSEIWEAGEI 221
           A+   L+   PE+E  +      + +TM     V   EL LE + L+ A+P+E+     +
Sbjct: 162 AMCPALQEVWPEDEQPQ----DWEGVTMENNGRVV--ELELEDVGLTGAVPAELGRLSAL 215

Query: 222 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
            KL LSRN +  +P E+    SL  L L  N++   P A +  L+SL  L L +N L  +
Sbjct: 216 RKLSLSRNRLTSVPAEIGQLTSLVKLYLHDNRLTSVP-AEIGQLTSLEGLWLRHNQLTSL 274

Query: 282 PSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340
           P++    +  L++L L  N + S+P       L  L EL+L   QL   P +I +L  L 
Sbjct: 275 PAE-IGQLTALRVLLLYGNQLTSVPAE--IGQLTSLTELHLADNQLTSVPAEIGQLTSLE 331

Query: 341 ILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            L L  N L S+P     LTSL  L L  N ++++P E+G L   L+ L L+GN L S+
Sbjct: 332 RLGLRDNQLTSVPAEIGQLTSLERLYLGGNRLTSVPAEIGQLT-ELKELNLEGNQLTSV 389



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 107/209 (51%), Gaps = 6/209 (2%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++LSL    L+++P+EI +   + KL L  N +  +P E+    SL+ L L  N++   P
Sbjct: 216 RKLSLSRNRLTSVPAEIGQLTSLVKLYLHDNRLTSVPAEIGQLTSLEGLWLRHNQLTSLP 275

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
            A +  L++L  L L  N L  VP++    +  L  L L+ N + S+P       L  L+
Sbjct: 276 -AEIGQLTALRVLLLYGNQLTSVPAE-IGQLTSLTELHLADNQLTSVPAE--IGQLTSLE 331

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L LR  QL   P +I +L  L  L L  N L S+P     LT L EL+L  N ++++P 
Sbjct: 332 RLGLRDNQLTSVPAEIGQLTSLERLYLGGNRLTSVPAEIGQLTELKELNLEGNQLTSVPA 391

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTILDR 406
           E+G L  SL+ L L  N L S+   I +R
Sbjct: 392 EIGQLT-SLERLYLGHNQLTSVPAVIRER 419



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 72/127 (56%), Gaps = 2/127 (1%)

Query: 8   GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           GN+LT +    I   T LTEL  + N L  +P  IG L+ L RL L  N++ S+P+ I  
Sbjct: 291 GNQLTSVPAE-IGQLTSLTELHLADNQLTSVPAEIGQLTSLERLGLRDNQLTSVPAEIGQ 349

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 126
             SL   Y+G N L+++PAE+G+L++L  L+L  NQL     E  QL  L  L L +N L
Sbjct: 350 LTSLERLYLGGNRLTSVPAEIGQLTELKELNLEGNQLTSVPAEIGQLTSLERLYLGHNQL 409

Query: 127 SGLPPEI 133
           + +P  I
Sbjct: 410 TSVPAVI 416



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 42/274 (15%)

Query: 115 RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           R+  L+L +  L+G +P E+G+++ LRKL L+ N L ++         PA +  L S + 
Sbjct: 190 RVVELELEDVGLTGAVPAELGRLSALRKLSLSRNRLTSV---------PAEIGQLTSLV- 239

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
                                     +L L    L+++P+EI +   +  L L  N +  
Sbjct: 240 --------------------------KLYLHDNRLTSVPAEIGQLTSLEGLWLRHNQLTS 273

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +L+ L+L  N++   P A +  L+SL+ L L +N L  VP++    +  L+
Sbjct: 274 LPAEIGQLTALRVLLLYGNQLTSVP-AEIGQLTSLTELHLADNQLTSVPAE-IGQLTSLE 331

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L L  N + S+P       L  L+ LYL   +L   P +I +L +L+ L+L  N L S+
Sbjct: 332 RLGLRDNQLTSVPAE--IGQLTSLERLYLGGNRLTSVPAEIGQLTELKELNLEGNQLTSV 389

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
           P     LTSL  L L  N ++++P  +    PS+
Sbjct: 390 PAEIGQLTSLERLYLGHNQLTSVPAVIRERNPSI 423


>gi|281362651|ref|NP_001163745.1| scribbled, isoform J [Drosophila melanogaster]
 gi|272477194|gb|ACZ95039.1| scribbled, isoform J [Drosophila melanogaster]
          Length = 2426

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|386766573|ref|NP_001247320.1| scribbled, isoform O [Drosophila melanogaster]
 gi|383292968|gb|AFH06637.1| scribbled, isoform O [Drosophila melanogaster]
          Length = 2515

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|348678832|gb|EGZ18649.1| hypothetical protein PHYSODRAFT_360673 [Phytophthora sojae]
          Length = 1247

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 214/505 (42%), Gaps = 95/505 (18%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ G     LS+  I +   L +L+ S N L  +P  I  L  L  LD+  N++  +PS
Sbjct: 281 LDMSGLDAWKLSSR-IWNLQFLKKLVLSHNCLTRIPSGIQDLIHLEELDVSHNQLTRLPS 339

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE----------------- 106
            +    +L E    +N + A   +L KL ++  LDL  N+LKE                 
Sbjct: 340 CLQTTTTLTEIRASHNFIQAFSPKLWKLREIRYLDLSHNRLKELPYVEGDLKLLRETREW 399

Query: 107 ------------------------YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 142
                                     +E C   L++LDLSNN L+ L  EI  + +L++L
Sbjct: 400 QVGVGLLARLEVLLLNDNRLVEVPKSIEKCS-ELTLLDLSNNQLTALRDEIPALASLKRL 458

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-EDLITMATRLSVTSKEL 201
           +L  N LR+L  ++ N           +RL    +S  +  K E L+  + +L +  KE 
Sbjct: 459 VLHHNALRSLPEAIGNLSCLEEFDLAHNRLLTLPESIGALHKLEMLLLFSNQLRLLPKEF 518

Query: 202 S----LEGMNLSAIPSEI------------------------WEAGEITK------LDLS 227
                L  +NL   P  I                        +E+ +  K      L L 
Sbjct: 519 GALSQLRHLNLDNNPKLINLKDFFGHLSSVSFFSASSCGIVTFESLDFLKDSPVRTLRLR 578

Query: 228 RNSIQELPPELSSCA---SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           +N++ E P  +   A   +LQ L+L+ N +   P A+L   S L  L L NN LR +P++
Sbjct: 579 QNALLEFPLLIGHAAMQDTLQELVLAGNHLSQVPLAVLLYCSHLQHLDLSNNSLRVLPTE 638

Query: 285 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
               +  L++L LS N +  LP+    + LP L+EL     QL + P  +  L QL  L+
Sbjct: 639 -IAHLRRLKVLYLSTNELQELPDE--LTQLPRLRELTCDHNQLEKLPLRVGNLSQLIKLN 695

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI---- 399
           +S N L+S+P     LT L  L  SDN +S LPP +  +    +      NP  ++    
Sbjct: 696 VSFNQLRSLPTSVMELTHLQSLYASDNLLSGLPPAISRVNCFCE---FSNNPFTALQHQH 752

Query: 400 ---RRTILDRGTKAVLKYLKDKIPE 421
              RR+ L R +K +     DK  E
Sbjct: 753 QQDRRSRLARASKLIDAGDFDKAEE 777


>gi|207080310|ref|NP_001128872.1| DKFZP459K227 protein [Pongo abelii]
 gi|55731898|emb|CAH92658.1| hypothetical protein [Pongo abelii]
          Length = 436

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 161/335 (48%), Gaps = 41/335 (12%)

Query: 49  IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 108
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G                   
Sbjct: 103 MRLDLSKRSIHILPSSIKVLTQLTELYLYSNKLQSLPAEVG------------------- 143

Query: 109 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    +   L YL
Sbjct: 144 ---CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTL-YL 199

Query: 169 R-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
           R +R+         TT E  I   ++LS+    LS+    +  +P+EI E   +  LD++
Sbjct: 200 RFNRI---------TTVEKDIKNLSKLSM----LSIRENKIKQLPAEIGELCNLITLDVA 246

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            N ++ LP E+ +C  +  L L  N++ D PD I  +LSSLS L L  N L  +P    K
Sbjct: 247 HNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI-GNLSSLSRLGLRYNRLSAIPRSLAK 305

Query: 288 DIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI-LRLQQLRILDLSQ 346
              + ++   + NI++LPE+   SSL  L  L L R   +  P     +   +  L++  
Sbjct: 306 CSALEELNLENNNISTLPES-LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEH 364

Query: 347 NSLQSIPEG-FKNLTSLTELDLSDNNISALPPELG 380
           N +  IP G F     L++L++ DN +++LP + G
Sbjct: 365 NRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFG 399



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 159/345 (46%), Gaps = 42/345 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L +  NKL  L    +     L  L  S+N L  +P+++ +L +L  LDL  N++  
Sbjct: 125 LTELYLYSNKLQSLPAE-VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLRE 183

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  L
Sbjct: 184 IPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITL 243

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+++N L  LP EIG  T +  L L  N L  L  ++ N                     
Sbjct: 244 DVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN--------------------- 282

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-L 238
                         LS  S+ L L    LSAIP  + +   + +L+L  N+I  LP   L
Sbjct: 283 --------------LSSLSR-LGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLL 327

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L++ 
Sbjct: 328 SSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMK 387

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 342
            N + SLP +  F +   + EL L   QL + P D+  L  LR L
Sbjct: 388 DNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVLLRFL 430



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 4/206 (1%)

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
           S  L L   ++  +PS I    ++T+L L  N +Q LP E+    +L TL LS N +   
Sbjct: 102 SMRLDLSKRSIHILPSSIKVLTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSL 161

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           PD+ L +L  L  L L +N LR++PS  ++ +  L  L L +N  +  E     +L  L 
Sbjct: 162 PDS-LDNLKKLRMLDLRHNKLREIPSVVYR-LDSLTTLYLRFNRITTVEKD-IKNLSKLS 218

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L +R  ++++ P +I  L  L  LD++ N L+ +P+   N T +T LDL  N +  LP 
Sbjct: 219 MLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPD 278

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRTI 403
            +G L  SL  L L  N L +I R++
Sbjct: 279 TIGNLS-SLSRLGLRYNRLSAIPRSL 303



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 160/379 (42%), Gaps = 63/379 (16%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +LD+    + +L ++ I   T LTEL    N L  +P  +G L  L+ L L +N + S+P
Sbjct: 104 RLDLSKRSIHILPSS-IKVLTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
            S+     L    + +N L  +P+ + +L  L TL L  N++     +   L +LS+L +
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSI 222

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
             N +  LP EIG++  L  L +  N L  L   + N                       
Sbjct: 223 RENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGN----------------------- 259

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
                  T  T L +   E       L  +P  I     +++L L  N +  +P  L+ C
Sbjct: 260 ------CTQITNLDLQHNE-------LLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKC 306

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
           ++L+ L L  N I   P+++L+SL  L+ L L  N  +  P  G      +  L++ +N 
Sbjct: 307 SALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHN- 365

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDIL-RLQQLRILDLSQNSLQSIPEGFKNLT 360
                                  ++ + P  I  R + L  L++  N L S+P  F   T
Sbjct: 366 -----------------------RINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 361 SLTELDLSDNNISALPPEL 379
           S+ EL+L+ N ++ +P ++
Sbjct: 403 SMVELNLATNQLTKIPEDV 421


>gi|386766577|ref|NP_001247321.1| scribbled, isoform Q [Drosophila melanogaster]
 gi|383292970|gb|AFH06638.1| scribbled, isoform Q [Drosophila melanogaster]
          Length = 2577

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|116487570|gb|AAI25846.1| Zgc:152984 [Danio rerio]
          Length = 590

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 181/381 (47%), Gaps = 45/381 (11%)

Query: 23  TMLTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 81
           ++   L+  +  L  +P+ I S  + L  L L  N+I  +P  +  C  L    + +N L
Sbjct: 6   SLFVRLVPCRCSLEQVPKEIFSFEKTLEELYLDANQIEELPKQLFNCQLLYRLSLPDNDL 65

Query: 82  SALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLP--------- 130
           + LP  +  L  L  LD+  N ++E+   ++ C++ L++++ S N +S LP         
Sbjct: 66  TVLPPGIANLINLRELDVSKNGIQEFPENIKNCKV-LAIVEASVNPISKLPEGFTQLLSL 124

Query: 131 --------------PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 176
                            G++T L+ L L  N L+ L  S+       L +  R  L  NE
Sbjct: 125 SQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSM-----HKLTQLERLDLGSNE 179

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E     E L  +        +EL ++G  L+ +P  I    +++ LD+S+N+++ +  
Sbjct: 180 FTEVPEVLEQLTGI--------RELWMDGNKLTFVPGMIGALKQLSYLDVSKNNVEMVEE 231

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           ++S C +LQ L+LS N +   P +I  SL  LS LK+D+N L  +P D    +  L  LD
Sbjct: 232 QISGCENLQDLLLSNNALTQLPGSI-GSLKKLSTLKVDDNQLMYLP-DTIGGLSHLDELD 289

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
            S+N I +LP +       +L+        L + P ++  L+ + +L L  N L+++PE 
Sbjct: 290 CSFNEIEALPSS--IGQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKLENLPEE 347

Query: 356 FKNLTSLTELDLSDNNISALP 376
             ++  L  ++LSDN +  LP
Sbjct: 348 MGDMQKLKVINLSDNKLRNLP 368



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 173/379 (45%), Gaps = 43/379 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N LTVL    IA+   L EL  SKN +   PE I +   L  ++   N I  
Sbjct: 55  LYRLSLPDNDLTVLPPG-IANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISK 113

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P   +   SL++ Y+ +  L  LPA  G+L+KL  L+L  NQLK       +L +L  L
Sbjct: 114 LPEGFTQLLSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMHKLTQLERL 173

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL +N  + +P  + ++T +R+L + GN L     + V G                    
Sbjct: 174 DLGSNEFTEVPEVLEQLTGIRELWMDGNKL-----TFVPG-------------------- 208

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                  +I    +LS     L +   N+  +  +I     +  L LS N++ +LP  + 
Sbjct: 209 -------MIGALKQLSY----LDVSKNNVEMVEEQISGCENLQDLLLSNNALTQLPGSIG 257

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           S   L TL +  N++   PD I   LS L  L    N +  +PS        L+     +
Sbjct: 258 SLKKLSTLKVDDNQLMYLPDTI-GGLSHLDELDCSFNEIEALPS-SIGQCVNLRTFAADH 315

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +A +P  P   SL ++  L+L   +L   P ++  +Q+L++++LS N L+++P  F  
Sbjct: 316 NLLAQMP--PEMGSLKNVTVLFLHSNKLENLPEEMGDMQKLKVINLSDNKLRNLPYSFTK 373

Query: 359 LTSLTELDLSDNNISALPP 377
           L  +T + LS+N    L P
Sbjct: 374 LNQMTAMWLSENQSKPLIP 392



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 137/304 (45%), Gaps = 20/304 (6%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQL L  L L +N L+ LPP I  +
Sbjct: 17  SLEQVPKEIFSFEKTLEELYLDANQIEELPKQLFNCQL-LYRLSLPDNDLTVLPPGIANL 75

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             LR+L ++ N ++    ++ N    A++             EAS      +       +
Sbjct: 76  INLRELDVSKNGIQEFPENIKNCKVLAIV-------------EASVNPISKLPEGFTQLL 122

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
           +  +L L    L  +P+      ++  L+L  N ++ LP  +     L+ L L  N+  +
Sbjct: 123 SLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMHKLTQLERLDLGSNEFTE 182

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 316
            P+ +L  L+ +  L +D N L  VP      +  L  LD+S N   + E    S   +L
Sbjct: 183 VPE-VLEQLTGIRELWMDGNKLTFVPG-MIGALKQLSYLDVSKNNVEMVEEQ-ISGCENL 239

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           Q+L L    L + P  I  L++L  L +  N L  +P+    L+ L ELD S N I ALP
Sbjct: 240 QDLLLSNNALTQLPGSIGSLKKLSTLKVDDNQLMYLPDTIGGLSHLDELDCSFNEIEALP 299

Query: 377 PELG 380
             +G
Sbjct: 300 SSIG 303



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 107/208 (51%), Gaps = 6/208 (2%)

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
           T +EL L+   +  +P +++    + +L L  N +  LPP +++  +L+ L +S+N I++
Sbjct: 31  TLEELYLDANQIEELPKQLFNCQLLYRLSLPDNDLTVLPPGIANLINLRELDVSKNGIQE 90

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FSSLPH 315
           +P+ I  +   L+ ++   NP+ ++P +GF    +L +  L  N A L   P  F  L  
Sbjct: 91  FPENI-KNCKVLAIVEASVNPISKLP-EGF--TQLLSLSQLYLNDAFLEFLPASFGRLTK 146

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           LQ L LR  QL+  P  + +L QL  LDL  N    +PE  + LT + EL +  N ++ +
Sbjct: 147 LQILELRENQLKMLPKSMHKLTQLERLDLGSNEFTEVPEVLEQLTGIRELWMDGNKLTFV 206

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P  +G L+  L  L +  N +  +   I
Sbjct: 207 PGMIGALK-QLSYLDVSKNNVEMVEEQI 233



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 27/226 (11%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP-- 258
           LSL   +L+ +P  I     + +LD+S+N IQE P  + +C  L  +  S N I   P  
Sbjct: 58  LSLPDNDLTVLPPGIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPEG 117

Query: 259 -------------DAILT-------SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
                        DA L         L+ L  L+L  N L+ +P    K +  L+ LDL 
Sbjct: 118 FTQLLSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMHK-LTQLERLDLG 176

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
            N    +PE      L  ++EL++   +L   P  I  L+QL  LD+S+N+++ + E   
Sbjct: 177 SNEFTEVPE--VLEQLTGIRELWMDGNKLTFVPGMIGALKQLSYLDVSKNNVEMVEEQIS 234

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              +L +L LS+N ++ LP  +G L+  L  L++D N L  +  TI
Sbjct: 235 GCENLQDLLLSNNALTQLPGSIGSLK-KLSTLKVDDNQLMYLPDTI 279


>gi|393912071|gb|EJD76579.1| leucine-rich repeat-containing protein 1 [Loa loa]
          Length = 1426

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 177/385 (45%), Gaps = 48/385 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD     L  + +++  +   L E+    N +  + + +    +L  L L +N ++ +PS
Sbjct: 18  LDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEVIRLPS 77

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I+    L E  +  N +S LP E+    +L  LDL SN +        QL  ++ L L+
Sbjct: 78  DIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPPTISQLTSMTSLGLN 137

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAS 181
           + SL+ +P +IG++  LR L +  N LRT+       P+ + LK LR   L  NE     
Sbjct: 138 DISLTQMPHDIGQLRNLRSLEVRENLLRTV------PPSISQLKQLRRLDLGHNE----- 186

Query: 182 TTKEDL---ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
              +DL   I+M   L    +EL ++  +L A+P  I +   + +LD+S N +  LP E+
Sbjct: 187 --LDDLPNEISMLENL----EELYVDQNDLEALPESIVQCRSLEQLDVSENKLMLLPDEI 240

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
                L  L +S+N ++  P +I   L  LS LK D N + Q+                 
Sbjct: 241 GDLEKLDDLTVSQNCLQVLPSSI-GRLKKLSMLKADRNAITQL----------------- 282

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
                    P   S   L E+YL    L E P+ +  L+ LR L+L +N L+ +P     
Sbjct: 283 --------TPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPPTIGG 334

Query: 359 LTSLTELDLSDNNISALPPELGLLE 383
            TSL+ L L DN I  LP E+G LE
Sbjct: 335 CTSLSVLSLRDNLIEQLPLEIGRLE 359



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 160/358 (44%), Gaps = 40/358 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           IA  T L EL    N ++ +PE I +  +L  LDL  N I  +P +IS   S+    + +
Sbjct: 79  IAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPPTISQLTSMTSLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 137
            +L+ +P ++G+L  L +L++  N L+       QL+ L  LDL +N L  LP EI  + 
Sbjct: 139 ISLTQMPHDIGQLRNLRSLEVRENLLRTVPPSISQLKQLRRLDLGHNELDDLPNEISMLE 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L +  N L  L  S+V   +   L    ++L    D      K D +T++      
Sbjct: 199 NLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMLLPDEIGDLEKLDDLTVSQNC--- 255

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
                     L  +PS I    +++ L   RN+I +L P + SC +L  + L+ N + + 
Sbjct: 256 ----------LQVLPSSIGRLKKLSMLKADRNAITQLTPAIGSCHALTEIYLTENLLTEI 305

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P + L +L SL  L LD N L+++P                         P       L 
Sbjct: 306 PSS-LGNLKSLRTLNLDKNQLKELP-------------------------PTIGGCTSLS 339

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
            L LR   + + P +I RL+ LR+LD+  N L  +P     L  L  L LS+N   A+
Sbjct: 340 VLSLRDNLIEQLPLEIGRLENLRVLDVCNNRLNYLPFTVNVLFKLRALWLSENQSQAM 397



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 4/154 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LDV  NKL +L +  I     L +L  S+N L  +P +IG L +L  L   +N I  
Sbjct: 223 LEQLDVSENKLMLLPDE-IGDLEKLDDLTVSQNCLQVLPSSIGRLKKLSMLKADRNAITQ 281

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSV 118
           +  +I  C +L E Y+  N L+ +P+ LG L  L TL+L  NQLKE    +  C   LSV
Sbjct: 282 LTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPPTIGGC-TSLSV 340

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L L +N +  LP EIG++  LR L +  N L  L
Sbjct: 341 LSLRDNLIEQLPLEIGRLENLRVLDVCNNRLNYL 374



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 114/254 (44%), Gaps = 38/254 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+L  L N  I+    L EL   +N L  +PE+I     L +LD+ +N+++ 
Sbjct: 177 LRRLDLGHNELDDLPNE-ISMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLML 235

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P  I     L +  +  N L  LP+ +G+L K                      LS+L 
Sbjct: 236 LPDEIGDLEKLDDLTVSQNCLQVLPSSIGRLKK----------------------LSMLK 273

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSE 179
              N+++ L P IG    L ++ LT N L  + SSL N      LK LR+  L +N+  E
Sbjct: 274 ADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGN------LKSLRTLNLDKNQLKE 327

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
              T    I   T LSV    LSL    +  +P EI     +  LD+  N +  LP  ++
Sbjct: 328 LPPT----IGGCTSLSV----LSLRDNLIEQLPLEIGRLENLRVLDVCNNRLNYLPFTVN 379

Query: 240 SCASLQTLILSRNK 253
               L+ L LS N+
Sbjct: 380 VLFKLRALWLSENQ 393


>gi|432855257|ref|XP_004068131.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Oryzias
           latipes]
          Length = 1635

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 182/390 (46%), Gaps = 62/390 (15%)

Query: 35  LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 93
           L  +P+ I S  R L  L L  N+I  +P  +  C +L +  M +N LS LP  +  L  
Sbjct: 69  LQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVN 128

Query: 94  LGTLDLHSNQLKEYC--VEACQ----------------------LRLSVLDLSNNSLSGL 129
           L  LD+  N ++E+   ++ C+                      L L+ L L++  L  L
Sbjct: 129 LKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYL 188

Query: 130 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 189
           P   G+++ LR L L  N L+T+  S+       L +  R  L  NE SE     E +  
Sbjct: 189 PANFGRLSKLRILELRENHLKTMPKSIHR-----LTQLERLDLGSNEFSEVPEVLEQIHN 243

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
           +        KEL L+  +L  IP  I +  ++  LDL++N I+ L  ++S C +L+ L+L
Sbjct: 244 L--------KELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLL 295

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 308
           S N ++  PD+I   L  L+ LK+D+N L  +P      + +L+  D S N + SLP   
Sbjct: 296 SSNMLQHLPDSI-GMLKKLTTLKVDDNQLTSLPHT-IGSLSLLEEFDCSCNELESLPPTI 353

Query: 309 PF--------------SSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
            +              + LP       ++  + LR  +L   P +I ++ +LR+L+LS N
Sbjct: 354 GYLHSLRTFAADENFLTELPREIGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDN 413

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L+++P  F  L  L  L LSDN   AL P
Sbjct: 414 RLKNLPFTFTKLKDLAALWLSDNQSKALIP 443



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 114/217 (52%), Gaps = 10/217 (4%)

Query: 201 LSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           L     +L  +P EI+     + +L L  N I+ELP +L +C +L+ L +  N + + P 
Sbjct: 62  LDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPT 121

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 318
            I  SL +L  L +  N +++ P D  K    L +++ S N I  LP+   F+ L +L +
Sbjct: 122 TI-ASLVNLKELDISKNGIQEFP-DNIKCCKGLSVVEASVNPITKLPDG--FTQLLNLTQ 177

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L+L    L   P +  RL +LRIL+L +N L+++P+    LT L  LDL  N  S +P  
Sbjct: 178 LFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEV 237

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           L  +  +L+ L LD N L++I  +I   G    L+YL
Sbjct: 238 LEQIH-NLKELWLDNNSLQTIPGSI---GKLRQLRYL 270



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 146/319 (45%), Gaps = 62/319 (19%)

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           C    +  +SVLD S+ SL  +P EI     TL +L L  N +  L   L N    AL  
Sbjct: 51  CFRGEEEVISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFN--CQAL-- 106

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                                           K+LS+   +LS +P+ I     + +LD+
Sbjct: 107 --------------------------------KKLSMPDNDLSNLPTTIASLVNLKELDI 134

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S+N IQE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 135 SKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDG-FTQLLNLTQLFLNDAFLEYLPAN-F 192

Query: 287 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLP-------HLQELYLRRM 324
             +  L+IL+L  N + ++P+              +  FS +P       +L+EL+L   
Sbjct: 193 GRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNN 252

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
            L+  P  I +L+QLR LDL++N ++++        +L +L LS N +  LP  +G+L+ 
Sbjct: 253 SLQTIPGSIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLK- 311

Query: 385 SLQALRLDGNPLRSIRRTI 403
            L  L++D N L S+  TI
Sbjct: 312 KLTTLKVDDNQLTSLPHTI 330



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 118/247 (47%), Gaps = 17/247 (6%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           +N L  MP++I  L++L RLDL  N    +P  +    +L E ++ NN+L  +P  +GKL
Sbjct: 205 ENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKL 264

Query: 92  SKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
            +L  LDL  N+++  +  V  C+  L  L LS+N L  LP  IG +  L  L +  N L
Sbjct: 265 RQLRYLDLAKNRIETLDSDVSGCEA-LEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQL 323

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
            +L  ++        L  L       E+ + S  + + +        + +  + +   L+
Sbjct: 324 TSLPHTI------GSLSLL-------EEFDCSCNELESLPPTIGYLHSLRTFAADENFLT 370

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P EI     +T + L  N ++ LP E+     L+ L LS N++K+ P    T L  L+
Sbjct: 371 ELPREIGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLP-FTFTKLKDLA 429

Query: 270 CLKLDNN 276
            L L +N
Sbjct: 430 ALWLSDN 436



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 112/257 (43%), Gaps = 40/257 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ + +   ++     L EL    N L  +P +IG L +L  LDL +NRI +
Sbjct: 221 LERLDLGSNEFSEVPE-VLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIET 279

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE--YCVEACQLRLSV 118
           + S +SGC +L +  + +N L  LP  +G L KL TL +  NQL    + + +  L L  
Sbjct: 280 LDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPHTIGSLSL-LEE 338

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
            D S N L  LPP IG + +LR      N L  L   + N                    
Sbjct: 339 FDCSCNELESLPPTIGYLHSLRTFAADENFLTELPREIGN-------------------- 378

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                          ++V    +SL    L  +P EI +  ++  L+LS N ++ LP   
Sbjct: 379 ------------CRNVTV----MSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTF 422

Query: 239 SSCASLQTLILSRNKIK 255
           +    L  L LS N+ K
Sbjct: 423 TKLKDLAALWLSDNQSK 439



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 8/123 (6%)

Query: 260 AILTSLSSLSCLKLDNNPL---RQVPSDGFK-DIPMLQILDLSYNIASLPENPP--FSSL 313
           ++L   SS+ CL++        R VP   F+ +  ++ +LD S+   SL + P   FS  
Sbjct: 23  SLLCFHSSVQCLEMTTKRKLIGRLVPCRCFRGEEEVISVLDYSH--CSLQQVPKEIFSFE 80

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
             L+ELYL   Q+ E P  +   Q L+ L +  N L ++P    +L +L ELD+S N I 
Sbjct: 81  RTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQ 140

Query: 374 ALP 376
             P
Sbjct: 141 EFP 143


>gi|281362657|ref|NP_001163747.1| scribbled, isoform M [Drosophila melanogaster]
 gi|272477197|gb|ACZ95041.1| scribbled, isoform M [Drosophila melanogaster]
          Length = 2490

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 124/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|428183868|gb|EKX52725.1| hypothetical protein GUITHDRAFT_65038, partial [Guillardia theta
           CCMP2712]
          Length = 518

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 204/436 (46%), Gaps = 70/436 (16%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L  L A  N +  +P ++G L  L +L +  NR+  +P  +  C SL   ++ +N L AL
Sbjct: 12  LKTLFAHNNKIEVLPTSVGDLKNLAQLRIFGNRLTWLPEELGLCESLQTLWVQDNQLIAL 71

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVE--ACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRK 141
           P  +GKL++L  L +  N L+ +  E   C+ L+    D   ++LS  P EI  +  L +
Sbjct: 72  PKSMGKLTQLKILVVARNPLRSFPAELQECENLKDIDADGLQDTLSVPPMEITVLRDLHE 131

Query: 142 LLLTGNPL-------------RTLR--SSLVNGPTPALLKYLRSRLPENEDSEASTTKED 186
           L L+ NPL             R LR  ++L++     + K  + R      +  ++  + 
Sbjct: 132 LHLSHNPLMALSDIIQTLNQLRVLRLDNTLIDEIPTFIGKLSKLRTISAVQNRLTSLPDQ 191

Query: 187 LITMA--TRLSVTS----------------KELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
           L T+   T+++  S                KELS+    +  IPS I     I ++ LS 
Sbjct: 192 LCTLTSLTKVNFDSNSLHVLPEAIGKLKNLKELSVTKNKIGWIPSSIGNLHSIEEMRLSF 251

Query: 229 NSIQELPPELSSCASLQTLILSRN-----------------------KIKDWPDAILTSL 265
           N +Q++P E+  C +L  L  S N                       +++  P + + +L
Sbjct: 252 NRLQKIPQEIGRCQTLVRLRCSHNLISQLPLELELLTNLEDLSFNSNQLETLPSS-MGAL 310

Query: 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE--LYLR 322
           ++++ L L  N L ++ S        L+ LDLS N IA LP     S++ ++++  L L 
Sbjct: 311 TAMTKLDLSKNKLSRM-SAVMGAWQRLEFLDLSGNMIAELP-----STIGNMRQMKLDLS 364

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
            M+L   P +I+ ++ L +LDLS N L+S+P   + L  +  L+L  NN+  LP ELG L
Sbjct: 365 NMELNNFPLEIVNMESLTVLDLSDNHLESLPPEIEQLVGVEILNLERNNLLFLPLELGSL 424

Query: 383 EPSLQALRLDGNPLRS 398
             +++ L   GN LRS
Sbjct: 425 Y-TIRELLFAGNELRS 439



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 192/398 (48%), Gaps = 22/398 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N L  LS+ +I +   L  L     L++ +P  IG LS+L  +   QNR+ S
Sbjct: 129 LHELHLSHNPLMALSD-IIQTLNQLRVLRLDNTLIDEIPTFIGKLSKLRTISAVQNRLTS 187

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  +    SL +    +N+L  LP  +GKL  L  L +  N++         L  +  +
Sbjct: 188 LPDQLCTLTSLTKVNFDSNSLHVLPEAIGKLKNLKELSVTKNKIGWIPSSIGNLHSIEEM 247

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LS N L  +P EIG+  TL +L  + N +  L   L        L +  ++L      E
Sbjct: 248 RLSFNRLQKIPQEIGRCQTLVRLRCSHNLISQLPLELELLTNLEDLSFNSNQL------E 301

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
              +    +T  T+L ++  +LS     +SA+    W+  E   LDLS N I ELP  + 
Sbjct: 302 TLPSSMGALTAMTKLDLSKNKLS----RMSAVMGA-WQRLEF--LDLSGNMIAELPSTIG 354

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +   ++ L LS  ++ ++P  I+ ++ SL+ L L +N L  +P +  + +  ++IL+L  
Sbjct: 355 NMRQMK-LDLSNMELNNFPLEIV-NMESLTVLDLSDNHLESLPPE-IEQLVGVEILNLER 411

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +  LP      SL  ++EL     +LR  P +  +L  ++ L+L  NSL+ +P+    
Sbjct: 412 NNLLFLPLE--LGSLYTIRELLFAGNELRSPPVEHCQLTMIKSLNLDNNSLEQLPDELSR 469

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           L +L +   ++N ++ LP   G L+ +L    + GN +
Sbjct: 470 LVNLEQFSATNNRLTFLPLTFGHLK-NLTHFDVSGNEM 506



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 173/392 (44%), Gaps = 66/392 (16%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ I  L  L  L  H N+I  +P+S+    +LA+  +  N L+ LP ELG    L TL
Sbjct: 2   IPDKIFELDYLKTLFAHNNKIEVLPTSVGDLKNLAQLRIFGNRLTWLPEELGLCESLQTL 61

Query: 98  DLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            +  NQ                      L  LP  +GK+T L+ L++  NPLR+      
Sbjct: 62  WVQDNQ----------------------LIALPKSMGKLTQLKILVVARNPLRSF----- 94

Query: 158 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEI 215
               PA L+   +     +D +A   ++ L      ++V     EL L    L A+   I
Sbjct: 95  ----PAELQECENL----KDIDADGLQDTLSVPPMEITVLRDLHELHLSHNPLMALSDII 146

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
               ++  L L    I E+P  +   + L+T+   +N++   PD + T L+SL+ +  D+
Sbjct: 147 QTLNQLRVLRLDNTLIDEIPTFIGKLSKLRTISAVQNRLTSLPDQLCT-LTSLTKVNFDS 205

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N L  +P +    +  L+ L ++ N I  +P +    +L  ++E+ L   +L++ P +I 
Sbjct: 206 NSLHVLP-EAIGKLKNLKELSVTKNKIGWIPSS--IGNLHSIEEMRLSFNRLQKIPQEIG 262

Query: 335 RLQQLRILDLSQ-----------------------NSLQSIPEGFKNLTSLTELDLSDNN 371
           R Q L  L  S                        N L+++P     LT++T+LDLS N 
Sbjct: 263 RCQTLVRLRCSHNLISQLPLELELLTNLEDLSFNSNQLETLPSSMGALTAMTKLDLSKNK 322

Query: 372 ISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           +S +   +G  +  L+ L L GN +  +  TI
Sbjct: 323 LSRMSAVMGAWQ-RLEFLDLSGNMIAELPSTI 353



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 78/197 (39%), Gaps = 47/197 (23%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR------------- 47
           M+KLD+  NKL+ +S  ++ +W  L  L  S N++  +P TIG++ +             
Sbjct: 313 MTKLDLSKNKLSRMSA-VMGAWQRLEFLDLSGNMIAELPSTIGNMRQMKLDLSNMELNNF 371

Query: 48  ---------LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 98
                    L  LDL  N + S+P  I     +    +  N L  LP ELG L  +  L 
Sbjct: 372 PLEIVNMESLTVLDLSDNHLESLPPEIEQLVGVEILNLERNNLLFLPLELGSLYTIRELL 431

Query: 99  LHSNQLKEYCVEACQL------------------------RLSVLDLSNNSLSGLPPEIG 134
              N+L+   VE CQL                         L     +NN L+ LP   G
Sbjct: 432 FAGNELRSPPVEHCQLTMIKSLNLDNNSLEQLPDELSRLVNLEQFSATNNRLTFLPLTFG 491

Query: 135 KMTTLRKLLLTGNPLRT 151
            +  L    ++GN + T
Sbjct: 492 HLKNLTHFDVSGNEMVT 508



 Score = 41.6 bits (96), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 1/109 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N L  L   L + +T + EL+ + N L   P     L+ +  L+L  N +  +P 
Sbjct: 407 LNLERNNLLFLPLELGSLYT-IRELLFAGNELRSPPVEHCQLTMIKSLNLDNNSLEQLPD 465

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 112
            +S   +L +F   NN L+ LP   G L  L   D+  N++    +E C
Sbjct: 466 ELSRLVNLEQFSATNNRLTFLPLTFGHLKNLTHFDVSGNEMVTPPMEVC 514


>gi|440894335|gb|ELR46812.1| hypothetical protein M91_11597 [Bos grunniens mutus]
          Length = 863

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 199/434 (45%), Gaps = 34/434 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M +L +  NKL V+SN  I ++  L  LI  KNLL  MPE I   + L  L L  N++  
Sbjct: 354 MKELQLTDNKLEVISNK-IENFKELRILILDKNLLKDMPENISHCAVLECLSLSDNKLTE 412

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSV 118
           +P +I    +L + ++  N L  +P  +  L+ + +L+   N + ++ +E  +C+  ++ 
Sbjct: 413 LPKNIHKLKNLRKLHINRNYLVKIPEYISHLNNMFSLEFSGNFITDFPIEIKSCK-NIAK 471

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           ++LS N +   P  +  + +L  L L GN +  +   +        L++  ++L    + 
Sbjct: 472 VELSYNKIMYFPLGLCALDSLYYLSLNGNYISEIPVDISFSKQLLHLEFNENKLLLFSEH 531

Query: 179 EASTTKEDLITMATRL----------SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 228
             S    + + +               V+   L L    L   P+E+     +  LDLS 
Sbjct: 532 LCSLINLEYLDLGKNKIRKIPPSISNMVSLHVLILCYNKLETFPTEVCTLDNLRVLDLSE 591

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGF 286
           N IQ +P E+ +   +Q L +S N+   +P  +  L SL  L+  +++   L ++P +  
Sbjct: 592 NQIQTIPSEICNLKGIQKLNISNNQFIYFPVELCHLQSLEELNISQINGKKLTRLPEE-L 650

Query: 287 KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLS 345
            ++  L+ LD+S N I  +P N     L  L  L     Q+R  P+  L L  L+ L+LS
Sbjct: 651 SNMTKLKGLDISNNAIREMPTN--IGELRSLVSLNADNNQIRYLPSSFLSLNALQQLNLS 708

Query: 346 QNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTIL- 404
            N+L  +P G  NL SL E++  DN          LL P ++  +  G  L +I R +  
Sbjct: 709 GNNLSVLPSGIYNLFSLKEINFDDN---------PLLRPPMEICK--GKQLYTIARYLQR 757

Query: 405 --DRGTKAVLKYLK 416
             +R  K + K  K
Sbjct: 758 ADERDEKILAKIFK 771



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 184/407 (45%), Gaps = 38/407 (9%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+    + EL  + N +   P  + SL  L  L+L +N++  IP ++S   +L    +  
Sbjct: 233 ISQLGNIKELFLNNNCIEDFPSGLESLKNLEILNLAKNKLRHIPDALSSLKNLRALNLEY 292

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMT 137
           N L+  P  L  L KL +L+L  N +     E      L  L L +N L+ L  EI  + 
Sbjct: 293 NRLTIFPKALCFLPKLISLNLTGNLINSLPKEIKELKNLEKLLLDHNKLTFLAVEIFLLL 352

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALL---KYLRSRLPENEDSEA-----STTKEDLIT 189
            +++L LT N L  + + + N     +L   K L   +PEN    A     S +   L  
Sbjct: 353 KMKELQLTDNKLEVISNKIENFKELRILILDKNLLKDMPENISHCAVLECLSLSDNKLTE 412

Query: 190 MATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +   +      ++L +    L  IP  I     +  L+ S N I + P E+ SC ++  +
Sbjct: 413 LPKNIHKLKNLRKLHINRNYLVKIPEYISHLNNMFSLEFSGNFITDFPIEIKSCKNIAKV 472

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD----------GFKDIPML----- 292
            LS NKI  +P   L +L SL  L L+ N + ++P D           F +  +L     
Sbjct: 473 ELSYNKIMYFPLG-LCALDSLYYLSLNGNYISEIPVDISFSKQLLHLEFNENKLLLFSEH 531

Query: 293 -------QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
                  + LDL  N I  +P  P  S++  L  L L   +L   PT++  L  LR+LDL
Sbjct: 532 LCSLINLEYLDLGKNKIRKIP--PSISNMVSLHVLILCYNKLETFPTEVCTLDNLRVLDL 589

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           S+N +Q+IP    NL  + +L++S+N     P EL  L+ SL+ L +
Sbjct: 590 SENQIQTIPSEICNLKGIQKLNISNNQFIYFPVELCHLQ-SLEELNI 635



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 111/211 (52%), Gaps = 11/211 (5%)

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L   S +LS E    S +PS+ +       ++L    +QE P ++     ++ L L  N+
Sbjct: 125 LGKISPQLSEENQKGSGLPSDNF------TINLKAKGLQEFPKDILKVKYVKYLYLDENE 178

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSS 312
           IK +  A    +  L  L +  N L  +PS+  + +  L++L++SYN I+ +P+    S 
Sbjct: 179 IKSFKGADSRDMLGLEILSIQKNGLSTLPSE-IQLLHNLKLLNVSYNQISHIPK--EISQ 235

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L +++EL+L    + + P+ +  L+ L IL+L++N L+ IP+   +L +L  L+L  N +
Sbjct: 236 LGNIKELFLNNNCIEDFPSGLESLKNLEILNLAKNKLRHIPDALSSLKNLRALNLEYNRL 295

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           +  P  L  L P L +L L GN + S+ + I
Sbjct: 296 TIFPKALCFL-PKLISLNLTGNLINSLPKEI 325



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 110/218 (50%), Gaps = 25/218 (11%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           +S IP EI + G I +L L+ N I++ P  L S  +L+ L L++NK++  PDA L+SL +
Sbjct: 226 ISHIPKEISQLGNIKELFLNNNCIEDFPSGLESLKNLEILNLAKNKLRHIPDA-LSSLKN 284

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP----------------PF 310
           L  L L+ N L   P      +P L  L+L+ N I SLP+                   F
Sbjct: 285 LRALNLEYNRLTIFPK-ALCFLPKLISLNLTGNLINSLPKEIKELKNLEKLLLDHNKLTF 343

Query: 311 SSLPHLQELYLRRMQLREAPTDIL-----RLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
            ++     L ++ +QL +   +++       ++LRIL L +N L+ +PE   +   L  L
Sbjct: 344 LAVEIFLLLKMKELQLTDNKLEVISNKIENFKELRILILDKNLLKDMPENISHCAVLECL 403

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            LSDN ++ LP  +  L+ +L+ L ++ N L  I   I
Sbjct: 404 SLSDNKLTELPKNIHKLK-NLRKLHINRNYLVKIPEYI 440


>gi|299752379|ref|XP_001830889.2| adenylate cyclase [Coprinopsis cinerea okayama7#130]
 gi|298409806|gb|EAU90953.2| adenylate cyclase [Coprinopsis cinerea okayama7#130]
          Length = 1852

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 169/361 (46%), Gaps = 49/361 (13%)

Query: 17  NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS-ISGCCSLAEFY 75
           + I S ++L +L  S   +  +P+++   S L RLDL  NRI  +  + +    +L E  
Sbjct: 550 DFIQSCSLLRDLRLSNMAMKKVPQSVQYSSTLHRLDLSSNRIADLTDAYLDHIPNLLELN 609

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 134
           + NN L  LP   G+L  L TL++ +N+  E+  E  Q++ L  LD+S N++  +P E+G
Sbjct: 610 VMNNKLEKLPWHFGRLRCLVTLNISNNRFTEFPKEVFQMKNLRTLDVSFNTIKVIPEELG 669

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
           ++  L   LL GN +          P  A   +  S L    +S +  T   ++ M  ++
Sbjct: 670 QLAELEHFLLVGNQISKF-------PDQARELHNLSMLDCRRNSVSDLT---IVLMLPKI 719

Query: 195 -SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP----PELSSCASLQTLIL 249
             V +   ++  ++LS  P+       +  LD+S N I +L     P   S  SL +L L
Sbjct: 720 QQVYADHNAISSLDLSIGPN-------MKGLDVSHNDITQLSLIPGPVGRSPYSLTSLDL 772

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP 309
           S  K+    D  L +L+SL  LKLD+N +R +P D   ++  L+ L +S N         
Sbjct: 773 SYTKLSSLDDLALGTLTSLKTLKLDHNTIRSIP-DTLGELSWLETLTVSDN--------- 822

Query: 310 FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
                          +L   P  I RLQ+L  LD   NSL  +P+   N  SLT ++++ 
Sbjct: 823 ---------------RLDSLPDSIGRLQKLETLDAHNNSLSELPQSLWNCASLTRINVTS 867

Query: 370 N 370
           N
Sbjct: 868 N 868



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 205/455 (45%), Gaps = 55/455 (12%)

Query: 1    MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
            + +LD+  N++  L++  +     L EL    N L  +P   G L  L+ L++  NR   
Sbjct: 581  LHRLDLSSNRIADLTDAYLDHIPNLLELNVMNNKLEKLPWHFGRLRCLVTLNISNNRFTE 640

Query: 61   IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
             P  +    +L    +  N +  +P ELG+L++L    L  NQ+ ++  +A +L  LS+L
Sbjct: 641  FPKEVFQMKNLRTLDVSFNTIKVIPEELGQLAELEHFLLVGNQISKFPDQARELHNLSML 700

Query: 120  DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            D   NS+S L   +  +  ++++    N + +L  S+  GP    L    + + +     
Sbjct: 701  DCRRNSVSDLTIVL-MLPKIQQVYADHNAISSLDLSI--GPNMKGLDVSHNDITQLSLIP 757

Query: 180  ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                +      +  LS T K  SL+ + L  + S       +  L L  N+I+ +P  L 
Sbjct: 758  GPVGRSPYSLTSLDLSYT-KLSSLDDLALGTLTS-------LKTLKLDHNTIRSIPDTLG 809

Query: 240  SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              + L+TL +S N++   PD+I   L  L  L   NN L ++P     +   L  ++++ 
Sbjct: 810  ELSWLETLTVSDNRLDSLPDSI-GRLQKLETLDAHNNSLSELPQ-SLWNCASLTRINVTS 867

Query: 300  NIASLPENPPFSS-----------------------------LPH-LQELYLRRMQLREA 329
            N      +PP SS                             L H L+ LYL   +L E 
Sbjct: 868  NFLGSWHDPPVSSDVGIDDASSLYLARKGSTASTTSTSGLPPLVHSLERLYLGENRLTEE 927

Query: 330  PTD-ILRLQQLRILDLSQNSLQSIPE-GFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
                ++  ++LR+L+LS N LQ +P   F+N+T L EL LS N ++++P E       L 
Sbjct: 928  SIHPLMIFKELRVLNLSFNELQELPPIFFRNMTQLEELYLSGNKLTSIPTEDLHRMTRLS 987

Query: 388  ALRLDGNPLRSIRR--------TILDRGTKAVLKY 414
             L L+GN L+++ +        +ILD G+  +LKY
Sbjct: 988  TLFLNGNRLQTLPQELGKLKDLSILDVGSN-MLKY 1021



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 141/338 (41%), Gaps = 23/338 (6%)

Query: 48  LIRLDLHQNRILSIP-SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 106
           ++ L L +N +L IP   I  C  L +  + N A+  +P  +   S L  LDL SN++ +
Sbjct: 534 IVSLKLSRNPMLEIPLDFIQSCSLLRDLRLSNMAMKKVPQSVQYSSTLHRLDLSSNRIAD 593

Query: 107 YCVEACQLRLSVLDLS--NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164
                     ++L+L+  NN L  LP   G++  L  L ++ N        +        
Sbjct: 594 LTDAYLDHIPNLLELNVMNNKLEKLPWHFGRLRCLVTLNISNNRFTEFPKEVFQ------ 647

Query: 165 LKYLRSRLPENEDSEASTTK---EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 221
           +K LR+      D   +T K   E+L  +A       +   L G  +S  P +  E   +
Sbjct: 648 MKNLRTL-----DVSFNTIKVIPEELGQLAEL-----EHFLLVGNQISKFPDQARELHNL 697

Query: 222 TKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
           + LD  RNS+ +L   L     +Q +    N I     +I  ++  L     D   L  +
Sbjct: 698 SMLDCRRNSVSDLTIVLM-LPKIQQVYADHNAISSLDLSIGPNMKGLDVSHNDITQLSLI 756

Query: 282 PSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           P    +    L  LDLSY   S  ++    +L  L+ L L    +R  P  +  L  L  
Sbjct: 757 PGPVGRSPYSLTSLDLSYTKLSSLDDLALGTLTSLKTLKLDHNTIRSIPDTLGELSWLET 816

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
           L +S N L S+P+    L  L  LD  +N++S LP  L
Sbjct: 817 LTVSDNRLDSLPDSIGRLQKLETLDAHNNSLSELPQSL 854



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 6/179 (3%)

Query: 201 LSLEGMNLSAIPSEIWE-AGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWP 258
           + L G +L  IP  + + A  I  L LSRN + E+P + + SC+ L+ L LS   +K  P
Sbjct: 513 IDLTGRSLRTIPVLLHQNADSIVSLKLSRNPMLEIPLDFIQSCSLLRDLRLSNMAMKKVP 572

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
            ++  S S+L  L L +N +  +       IP L  L++  N +  LP +  F  L  L 
Sbjct: 573 QSVQYS-STLHRLDLSSNRIADLTDAYLDHIPNLLELNVMNNKLEKLPWH--FGRLRCLV 629

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
            L +   +  E P ++ +++ LR LD+S N+++ IPE    L  L    L  N IS  P
Sbjct: 630 TLNISNNRFTEFPKEVFQMKNLRTLDVSFNTIKVIPEELGQLAELEHFLLVGNQISKFP 688



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 27/185 (14%)

Query: 235 PPELS-SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           PPE   +  S   + L+   ++  P  +  +  S+  LKL  NP+ ++P D  +   +L+
Sbjct: 500 PPEEDLNFESFDFIDLTGRSLRTIPVLLHQNADSIVSLKLSRNPMLEIPLDFIQSCSLLR 559

Query: 294 ILDLSYNIA--SLPENPPFSS----------------------LPHLQELYLRRMQLREA 329
            L LS N+A   +P++  +SS                      +P+L EL +   +L + 
Sbjct: 560 DLRLS-NMAMKKVPQSVQYSSTLHRLDLSSNRIADLTDAYLDHIPNLLELNVMNNKLEKL 618

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
           P    RL+ L  L++S N     P+    + +L  LD+S N I  +P ELG L   L+  
Sbjct: 619 PWHFGRLRCLVTLNISNNRFTEFPKEVFQMKNLRTLDVSFNTIKVIPEELGQLA-ELEHF 677

Query: 390 RLDGN 394
            L GN
Sbjct: 678 LLVGN 682


>gi|357138436|ref|XP_003570798.1| PREDICTED: leucine-rich repeat receptor-like protein kinase
           PXL2-like [Brachypodium distachyon]
          Length = 1033

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 189/381 (49%), Gaps = 30/381 (7%)

Query: 29  IASKNLLNGMPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALS-ALPA 86
           +A  NL   +P  +G +  L  L L++N++   IP+ +    SLA   + +N LS A+P 
Sbjct: 242 LAIGNLEGPIPPELGKMPSLASLFLYKNKLTGEIPAELGNVSSLAFLDLSDNLLSGAIPP 301

Query: 87  ELGKLSKLGTLDLHSNQLKEYCVEA--CQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLL 143
           E+GK+S+L  L+L  N+L      A      L VL+L NNSLSG LP  +G+ + L+ + 
Sbjct: 302 EVGKMSQLRVLNLMCNRLTGEVPAAVGAMAALEVLELWNNSLSGPLPAALGRSSPLQWVD 361

Query: 144 LTGNPLRTLRSSLVNGPTPALL--KYLRSRLPENEDSEASTTKEDLITMATRLSVTS-KE 200
           ++ N       S   G  P +   K L   +               I  A  LS  S   
Sbjct: 362 VSSN-------SFTGGIPPGICEGKALAKLIMFGNGFSGE------IPAALALSCDSLVR 408

Query: 201 LSLEGMNL-SAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWP 258
           + L+G  +  +IP+   +   + +L+L+ N ++ E+P +L+S +SL  + +SRN+++   
Sbjct: 409 VRLQGNRINGSIPAGFGKLPWLQRLELAGNDLEGEIPVDLASSSSLSFVDVSRNRLQGTL 468

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN--IASLPENPPFSSLPHL 316
            A L ++ SL       N +     D F++ P L  LDLS N     +P +   +S   L
Sbjct: 469 PAGLFAVPSLQSFMAAENLISGGIPDEFQECPALGALDLSGNRLTGGVPAS--LASCQRL 526

Query: 317 QELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISA 374
             L LRR  L  A P  + ++  L +LDLS NSL   IPE F +  +L  ++L+DNN++ 
Sbjct: 527 VSLNLRRNGLSGAIPPALGKMPALAVLDLSGNSLSGGIPESFGSSPALETMNLADNNLTG 586

Query: 375 LPPELGLLEPSLQALRLDGNP 395
             P  G+L  ++    L GNP
Sbjct: 587 PVPANGVLR-TINPGELAGNP 606



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 121/462 (26%), Positives = 184/462 (39%), Gaps = 86/462 (18%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI- 58
           +  LD+ G  L+   +  +   T L  L  S N  +  +P++   L  L  LD+ QN   
Sbjct: 71  VDSLDLAGKNLSGKVSGALLRLTSLAVLNLSSNAFSAALPKSFSPLPALRALDVSQNSFD 130

Query: 59  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RL 116
            S PS +           GNN + ALP +L   + L T+DL           A     +L
Sbjct: 131 GSFPSGLGASLVFVN-GSGNNFVGALPLDLANATSLDTIDLRGCFFSGAIPAAYGALTKL 189

Query: 117 SVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP------ALLKYLR 169
             L LS N++ G +PPE+G++  L  L++  N L         G  P      A L+YL 
Sbjct: 190 KFLGLSGNNIGGAIPPELGELEALESLVIGYNELE--------GAIPPELGNLASLQYLD 241

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
             +   E         +L  M +  S+   +  L G     IP+E+     +  LDLS N
Sbjct: 242 LAIGNLE----GPIPPELGKMPSLASLFLYKNKLTG----EIPAELGNVSSLAFLDLSDN 293

Query: 230 SIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ-VPSDGFK 287
            +   +PPE+   + L+ L L  N++     A + ++++L  L+L NN L   +P+   +
Sbjct: 294 LLSGAIPPEVGKMSQLRVLNLMCNRLTGEVPAAVGAMAALEVLELWNNSLSGPLPAALGR 353

Query: 288 DIPMLQILDLSYNI---------------------------------------------- 301
             P LQ +D+S N                                               
Sbjct: 354 SSP-LQWVDVSSNSFTGGIPPGICEGKALAKLIMFGNGFSGEIPAALALSCDSLVRVRLQ 412

Query: 302 -----ASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQ-SIPE 354
                 S+P    F  LP LQ L L    L  E P D+     L  +D+S+N LQ ++P 
Sbjct: 413 GNRINGSIPAG--FGKLPWLQRLELAGNDLEGEIPVDLASSSSLSFVDVSRNRLQGTLPA 470

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           G   + SL     ++N IS   P+     P+L AL L GN L
Sbjct: 471 GLFAVPSLQSFMAAENLISGGIPDEFQECPALGALDLSGNRL 512


>gi|302763998|ref|XP_002965420.1| hypothetical protein SELMODRAFT_406781 [Selaginella moellendorffii]
 gi|300166234|gb|EFJ32840.1| hypothetical protein SELMODRAFT_406781 [Selaginella moellendorffii]
          Length = 1049

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 138/405 (34%), Positives = 194/405 (47%), Gaps = 49/405 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLN-GMPETIGSLSRLIRLDLHQNRIL-SI 61
           L++  N+LT      +   T L  L  S N L+ G+P  + + SRL+ ++L +NR+  SI
Sbjct: 167 LNLANNRLTGGIPRELGKLTSLKTLDLSINFLSAGIPSEVSNCSRLLYINLSKNRLTGSI 226

Query: 62  PSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEA-CQLRL-SV 118
           P S+     L +  +G N L+ + P+ LG  S+L +LDL  N L     +   QLRL   
Sbjct: 227 PPSLGELGLLRKVALGGNELTGMIPSSLGNCSQLVSLDLEHNLLSGAIPDPLYQLRLLER 286

Query: 119 LDLSNNSL-SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
           L LS N L  G+ P +G  + L +L L  N L         GP PA +  L+     N  
Sbjct: 287 LFLSTNMLIGGISPALGNFSVLSQLFLQDNAL--------GGPIPASVGALKQLQVLNLS 338

Query: 178 SEASTTK-EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELP 235
             A T      I   T L V   ++ +  +N   IP+E+    ++  L LS N+I   +P
Sbjct: 339 GNALTGNIPPQIAGCTTLQVL--DVRVNALN-GEIPTELGSLSQLANLTLSFNNISGSIP 395

Query: 236 PELSSCASLQTLILSRNKIKD-WPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPMLQ 293
           PEL +C  LQ L L  NK+    PD+   SL+ L  L L  N L  ++PS    +I  L+
Sbjct: 396 PELLNCRKLQILRLQGNKLSGKLPDS-WNSLTGLQILNLRGNNLSGEIPSS-LLNILSLK 453

Query: 294 ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ-SI 352
            L LSYN  SL  N P +                     I RLQ+L+ L LS NSL+ SI
Sbjct: 454 RLSLSYN--SLSGNVPLT---------------------IGRLQELQSLSLSHNSLEKSI 490

Query: 353 PEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGNPL 396
           P    N ++L  L+ S N +   LPPE+G L   LQ L+L  N L
Sbjct: 491 PPEIGNCSNLAVLEASYNRLDGPLPPEIGYLS-KLQRLQLRDNKL 534



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 214/444 (48%), Gaps = 50/444 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 59
           + K+ + GN+LT +  + + + + L  L    NLL+G +P+ +  L  L RL L  N ++
Sbjct: 236 LRKVALGGNELTGMIPSSLGNCSQLVSLDLEHNLLSGAIPDPLYQLRLLERLFLSTNMLI 295

Query: 60  -SIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYC---VEACQL 114
             I  ++     L++ ++ +NAL   +PA +G L +L  L+L  N L       +  C  
Sbjct: 296 GGISPALGNFSVLSQLFLQDNALGGPIPASVGALKQLQVLNLSGNALTGNIPPQIAGCT- 354

Query: 115 RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR-TLRSSLVNGPTPALLKY----L 168
            L VLD+  N+L+G +P E+G ++ L  L L+ N +  ++   L+N     +L+     L
Sbjct: 355 TLQVLDVRVNALNGEIPTELGSLSQLANLTLSFNNISGSIPPELLNCRKLQILRLQGNKL 414

Query: 169 RSRLPENEDSEASTTKEDLITM----------ATRLSVTS-KELSLEGMNLSA-IPSEIW 216
             +LP   DS  S T   ++ +          ++ L++ S K LSL   +LS  +P  I 
Sbjct: 415 SGKLP---DSWNSLTGLQILNLRGNNLSGEIPSSLLNILSLKRLSLSYNSLSGNVPLTIG 471

Query: 217 EAGEITKLDLSRNSIQE-LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
              E+  L LS NS+++ +PPE+ +C++L  L  S N++       +  LS L  L+L +
Sbjct: 472 RLQELQSLSLSHNSLEKSIPPEIGNCSNLAVLEASYNRLDGPLPPEIGYLSKLQRLQLRD 531

Query: 276 NPLR-QVPSD--GFKDIPMLQILD--LSYNIASLPENPPFSSLPHLQELYLRRMQLREA- 329
           N L  ++P    G K++  L I +  LS  I  L        L  +Q++ L    L    
Sbjct: 532 NKLSGEIPETLIGCKNLTYLHIGNNRLSGTIPVL-----LGGLEQMQQIRLENNHLTGGI 586

Query: 330 PTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISA-LPPELG--LLEPS 385
           P     L  L+ LD+S NSL   +P    NL +L  L++S N++   +PP L       S
Sbjct: 587 PASFSALVNLQALDVSVNSLTGPVPSFLANLENLRSLNVSYNHLQGEIPPALSKKFGASS 646

Query: 386 LQA-LRLDGNPL-----RSIRRTI 403
            Q   RL G PL     RS R+ +
Sbjct: 647 FQGNARLCGRPLVVQCSRSTRKKL 670



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 144/342 (42%), Gaps = 66/342 (19%)

Query: 86  AELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKL 142
           A+LG+L  L TL LHSN       +  +    L V+ L NN+  G +P  +  +  L+ L
Sbjct: 108 ADLGRLGSLDTLSLHSNAFNGSIPDSLSAASNLRVIYLHNNAFDGQIPASLAALQKLQVL 167

Query: 143 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 202
            L  N L         G  P  L  L                          S+ + +LS
Sbjct: 168 NLANNRL--------TGGIPRELGKLT-------------------------SLKTLDLS 194

Query: 203 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAI 261
           +  ++ + IPSE+     +  ++LS+N +   +PP L     L+ + L  N++     + 
Sbjct: 195 INFLS-AGIPSEVSNCSRLLYINLSKNRLTGSIPPSLGELGLLRKVALGGNELTGMIPSS 253

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYL 321
           L + S L  L L++N L     D    + +L+ L LS N+     +P   +   L +L+L
Sbjct: 254 LGNCSQLVSLDLEHNLLSGAIPDPLYQLRLLERLFLSTNMLIGGISPALGNFSVLSQLFL 313

Query: 322 RRMQLRE-APTDILRLQQLRILDLSQNSLQS-------------------------IPEG 355
           +   L    P  +  L+QL++L+LS N+L                           IP  
Sbjct: 314 QDNALGGPIPASVGALKQLQVLNLSGNALTGNIPPQIAGCTTLQVLDVRVNALNGEIPTE 373

Query: 356 FKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGNPL 396
             +L+ L  L LS NNIS  +PPEL L    LQ LRL GN L
Sbjct: 374 LGSLSQLANLTLSFNNISGSIPPEL-LNCRKLQILRLQGNKL 414


>gi|345489480|ref|XP_001603194.2| PREDICTED: protein lap4-like [Nasonia vitripennis]
          Length = 2178

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 178/389 (45%), Gaps = 43/389 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL+   N +  +P+    L+RL +L L  N +  +P  I    +L E  +  N +  +
Sbjct: 39  LEELLLDANHIRDLPKNFFRLTRLRKLGLSDNELHRLPPDIQNFENLVELDVSRNDIPEI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +  L  L   D  SN +        +LR L+VL L++ SL  LPP  G +  L+ L 
Sbjct: 99  PENIKNLRSLQVADFSSNPIPRLPSGFVELRNLTVLGLNDMSLQQLPPNFGGLEALQSLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+TL  SL      + LK L                              + L L
Sbjct: 159 LRENLLKTLPDSL------SQLKKL------------------------------ERLDL 182

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
               +  +P  I +   + +L L  N +Q LPPE+    SL  L +S N+++D P+ I +
Sbjct: 183 GDNIIEELPPHIGKLPSLQELWLDSNQLQHLPPEIGQLKSLVCLDVSENRLEDLPEEI-S 241

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
            L SL+ L L  N + ++P +G  D+  L IL +  N ++ L  N    +  +LQEL L 
Sbjct: 242 GLESLTDLHLSQNVIEKLP-EGLGDLINLTILKVDQNRLSVLTHN--VGNCVNLQELILT 298

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
              L E P  I  L  L  L++ +NSLQS+P    NL  L  L L DN +  LP E+G  
Sbjct: 299 ENFLLELPVSIGNLVNLNNLNVDRNSLQSLPTEIGNLKKLGVLSLRDNKLQYLPTEVGQC 358

Query: 383 EPSLQALRLDGNPLRSIRRTILDRGTKAV 411
              L  L + GN L+ +  ++++   KAV
Sbjct: 359 T-DLHVLDVSGNRLQYLPYSLINLNLKAV 386



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 104/192 (54%), Gaps = 5/192 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S + +EL L+  ++  +P   +    + KL LS N +  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRSLEELLLDANHIRDLPKNFFRLTRLRKLGLSDNELHRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP-FS 311
            I + P+ I  +L SL      +NP+ ++PS GF ++  L +L L  N  SL + PP F 
Sbjct: 94  DIPEIPENI-KNLRSLQVADFSSNPIPRLPS-GFVELRNLTVLGL--NDMSLQQLPPNFG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
            L  LQ L LR   L+  P  + +L++L  LDL  N ++ +P     L SL EL L  N 
Sbjct: 150 GLEALQSLELRENLLKTLPDSLSQLKKLERLDLGDNIIEELPPHIGKLPSLQELWLDSNQ 209

Query: 372 ISALPPELGLLE 383
           +  LPPE+G L+
Sbjct: 210 LQHLPPEIGQLK 221



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 170/371 (45%), Gaps = 42/371 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N+L  L  + I ++  L EL  S+N +  +PE I +L  L   D   N I  
Sbjct: 62  LRKLGLSDNELHRLPPD-IQNFENLVELDVSRNDIPEIPENIKNLRSLQVADFSSNPIPR 120

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +PS      +L    + + +L  LP   G L  L +L+L  N LK       QL +L  L
Sbjct: 121 LPSGFVELRNLTVLGLNDMSLQQLPPNFGGLEALQSLELRENLLKTLPDSLSQLKKLERL 180

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL +N +  LPP IGK+ +L++L L  N L+ L   +    +   L    +RL       
Sbjct: 181 DLGDNIIEELPPHIGKLPSLQELWLDSNQLQHLPPEIGQLKSLVCLDVSENRL------- 233

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                EDL    + L   + +L L    +  +P  + +   +T L + +N +  L   + 
Sbjct: 234 -----EDLPEEISGLESLT-DLHLSQNVIEKLPEGLGDLINLTILKVDQNRLSVLTHNVG 287

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ LIL+ N + + P +I  +L +L+ L +D N L+ +P++               
Sbjct: 288 NCVNLQELILTENFLLELPVSI-GNLVNLNNLNVDRNSLQSLPTE--------------- 331

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                       +L  L  L LR  +L+  PT++ +   L +LD+S N LQ +P    NL
Sbjct: 332 ----------IGNLKKLGVLSLRDNKLQYLPTEVGQCTDLHVLDVSGNRLQYLPYSLINL 381

Query: 360 TSLTELDLSDN 370
            +L  + LS+N
Sbjct: 382 -NLKAVWLSEN 391


>gi|116497081|gb|AAI26465.1| Erbb2 interacting protein [Homo sapiens]
          Length = 1371

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 186/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I   L +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETIGL-LKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIG L  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-IST 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|425465644|ref|ZP_18844951.1| Small GTP-binding protein domain protein (fragment) [Microcystis
           aeruginosa PCC 9809]
 gi|389832091|emb|CCI24623.1| Small GTP-binding protein domain protein (fragment) [Microcystis
           aeruginosa PCC 9809]
          Length = 865

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 122/220 (55%), Gaps = 7/220 (3%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L+L    +S IP  + +   +  L LS N I E+P  L+   SLQ L L+ N+I++  +A
Sbjct: 44  LNLRNNQISEIPEALAQLTSLQHLRLSNNQISEIPEALAQLTSLQVLNLNNNQIREIQEA 103

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
            L  L+SL  L L+NN +R++P +    +  LQ L L+ N I+ +P+    + L  LQ L
Sbjct: 104 -LAHLTSLQGLFLNNNQIREIP-EALAHLTSLQYLYLNNNQISEIPK--ALAQLTSLQHL 159

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
           +L   Q+RE P  + +L  L+ LDLS N ++ IPE   +LTSL  L L +N I  +P  L
Sbjct: 160 FLYNNQIREIPEALAQLTSLQDLDLSNNQIREIPEALAHLTSLQRLYLDNNQIREIPEAL 219

Query: 380 GLLEPSLQALRLDGNPLRSIRRTILDRGT-KAVLKYLKDK 418
             L  +L+ L L  NP+ ++   I+     +A+  YLK+K
Sbjct: 220 AHL-VNLKGLVLGNNPITNVPPEIICYDNPQAIFSYLKNK 258



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 117/239 (48%), Gaps = 15/239 (6%)

Query: 47  RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 106
           R  +LDL    +  IP  I    SL    + NN +S +P  L +L+ L  L L +NQ+ E
Sbjct: 17  RAEKLDLSNKNLTEIPPEIPQLTSLQYLNLRNNQISEIPEALAQLTSLQHLRLSNNQISE 76

Query: 107 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
                 QL  L VL+L+NN +  +   +  +T+L+ L L  N +R +  +L +  +   L
Sbjct: 77  IPEALAQLTSLQVLNLNNNQIREIQEALAHLTSLQGLFLNNNQIREIPEALAHLTS---L 133

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
           +YL   L  N+ SE       L ++        + L L    +  IP  + +   +  LD
Sbjct: 134 QYL--YLNNNQISEIPKALAQLTSL--------QHLFLYNNQIREIPEALAQLTSLQDLD 183

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           LS N I+E+P  L+   SLQ L L  N+I++ P+A L  L +L  L L NNP+  VP +
Sbjct: 184 LSNNQIREIPEALAHLTSLQRLYLDNNQIREIPEA-LAHLVNLKGLVLGNNPITNVPPE 241



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 81/153 (52%), Gaps = 8/153 (5%)

Query: 14  LSNNLI-------ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 66
           LSNN I       A  T L  L  + N +  + E +  L+ L  L L+ N+I  IP +++
Sbjct: 69  LSNNQISEIPEALAQLTSLQVLNLNNNQIREIQEALAHLTSLQGLFLNNNQIREIPEALA 128

Query: 67  GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNS 125
              SL   Y+ NN +S +P  L +L+ L  L L++NQ++E      QL  L  LDLSNN 
Sbjct: 129 HLTSLQYLYLNNNQISEIPKALAQLTSLQHLFLYNNQIREIPEALAQLTSLQDLDLSNNQ 188

Query: 126 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
           +  +P  +  +T+L++L L  N +R +  +L +
Sbjct: 189 IREIPEALAHLTSLQRLYLDNNQIREIPEALAH 221



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 14/208 (6%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +A  T L  L  + N +  +PE +  L+ L  L L+ N+I  IP +++   SL   ++ N
Sbjct: 104 LAHLTSLQGLFLNNNQIREIPEALAHLTSLQYLYLNNNQISEIPKALAQLTSLQHLFLYN 163

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N +  +P  L +L+ L  LDL +NQ++E       L  L  L L NN +  +P  +  + 
Sbjct: 164 NQIREIPEALAQLTSLQDLDLSNNQIREIPEALAHLTSLQRLYLDNNQIREIPEALAHLV 223

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTP-ALLKYLRSRL--PENE-----DSEASTTKEDLIT 189
            L+ L+L  NP+  +   ++    P A+  YL+++   P NE       E    K  L+ 
Sbjct: 224 NLKGLVLGNNPITNVPPEIICYDNPQAIFSYLKNKATRPLNELKVLLVGEGDVGKTSLLK 283

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWE 217
                +  S+E    G+NL     E W+
Sbjct: 284 RLLHNTFNSEEPKTPGINL-----EKWQ 306



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 112/262 (42%), Gaps = 40/262 (15%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           KLD+    LT +    I   T L  L    N ++ +PE +  L+ L  L L  N+I  IP
Sbjct: 20  KLDLSNKNLTEIPPE-IPQLTSLQYLNLRNNQISEIPEALAQLTSLQHLRLSNNQISEIP 78

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
            +++   SL    + NN +  +   L  L+ L  L L++NQ++E       L  L  L L
Sbjct: 79  EALAQLTSLQVLNLNNNQIREIQEALAHLTSLQGLFLNNNQIREIPEALAHLTSLQYLYL 138

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
           +NN +S +P  + ++T+L+ L L  N +R +  +L                         
Sbjct: 139 NNNQISEIPKALAQLTSLQHLFLYNNQIREIPEALA------------------------ 174

Query: 182 TTKEDLITMATRLSVTS-KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                         +TS ++L L    +  IP  +     + +L L  N I+E+P  L+ 
Sbjct: 175 -------------QLTSLQDLDLSNNQIREIPEALAHLTSLQRLYLDNNQIREIPEALAH 221

Query: 241 CASLQTLILSRNKIKDWPDAIL 262
             +L+ L+L  N I + P  I+
Sbjct: 222 LVNLKGLVLGNNPITNVPPEII 243



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 2/159 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L++  N+++ +   L A  T L  L  S N ++ +PE +  L+ L  L+L+ N+I  
Sbjct: 41  LQYLNLRNNQISEIPEAL-AQLTSLQHLRLSNNQISEIPEALAQLTSLQVLNLNNNQIRE 99

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           I  +++   SL   ++ NN +  +P  L  L+ L  L L++NQ+ E      QL  L  L
Sbjct: 100 IQEALAHLTSLQGLFLNNNQIREIPEALAHLTSLQYLYLNNNQISEIPKALAQLTSLQHL 159

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
            L NN +  +P  + ++T+L+ L L+ N +R +  +L +
Sbjct: 160 FLYNNQIREIPEALAQLTSLQDLDLSNNQIREIPEALAH 198



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LDLS  +L  IP     LTSL  L+L +N IS +P  L  L  SLQ LRL  N +  I
Sbjct: 21  LDLSNKNLTEIPPEIPQLTSLQYLNLRNNQISEIPEALAQL-TSLQHLRLSNNQISEI 77


>gi|51092111|gb|AAT94469.1| RE02389p [Drosophila melanogaster]
          Length = 1756

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDDI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMIKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 96/205 (46%), Gaps = 27/205 (13%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSS 312
            I D PD I   L SL      +NP+ ++PS                          FS 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPSG-------------------------FSQ 127

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
           L +L  L L  M L   P D   L QL  L+L +N L+ +PE    LT L  LDL DN I
Sbjct: 128 LKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEI 187

Query: 373 SALPPELGLLEPSLQALRLDGNPLR 397
             LPP LG L P L  L LD N L+
Sbjct: 188 EDLPPYLGYL-PGLHELWLDHNQLQ 211



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 125/265 (47%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP +I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDDIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N               EN                      
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC--------------EN---------------------- 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPASIGQMIKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDDI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMIKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 155/323 (47%), Gaps = 23/323 (7%)

Query: 65  ISGCCSLAEFYMGNN-ALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
             GC    EF    + +L  +P E+ + S+ L  L L +N +++      +L RL  L L
Sbjct: 8   FKGCNRQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGL 67

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
           S+N +  LPP+I     L +L ++ N +  +         P  +K+L+S    +  S   
Sbjct: 68  SDNEIGRLPPDIQNFENLVELDVSRNDIPDI---------PDDIKHLQSLQVADFSSNPI 118

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
                  +    L+V    L L  M+L+ +P++     ++  L+L  N ++ LP  +S  
Sbjct: 119 PKLPSGFSQLKNLTV----LGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQL 174

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKDIPMLQILDLSYN 300
             L+ L L  N+I+D P   L  L  L  L LD+N L+++P + G   +  L  LD+S N
Sbjct: 175 TKLKRLDLGDNEIEDLP-PYLGYLPGLHELWLDHNQLQRLPPELGL--LTKLTYLDVSEN 231

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            +  LP     S L  L +L L +  L   P DI +L +L IL L QN LQ + +   N 
Sbjct: 232 RLEELPNE--ISGLVSLTDLDLAQNLLEALPDDIAKLSRLTILKLDQNRLQRLNDTLGNC 289

Query: 360 TSLTELDLSDNNISALPPELGLL 382
            ++ EL L++N +S LP  +G +
Sbjct: 290 ENMQELILTENFLSELPASIGQM 312



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG + +L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMIKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|403267431|ref|XP_003925836.1| PREDICTED: protein LAP2 isoform 2 [Saimiri boliviensis boliviensis]
          Length = 1419

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 186/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I   L +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGL-LKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGELTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIG L  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGELTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 9/190 (4%)

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
           T +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I++
Sbjct: 47  TLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQE 106

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSSL 313
           +P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  L
Sbjct: 107 FPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGRL 160

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
             LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N ++
Sbjct: 161 TKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLT 220

Query: 374 ALPPELGLLE 383
            +P  +G L+
Sbjct: 221 FIPGFIGSLK 230



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGELT-NLRTFAADHNYLQQL 337


>gi|403267429|ref|XP_003925835.1| PREDICTED: protein LAP2 isoform 1 [Saimiri boliviensis boliviensis]
          Length = 1371

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 186/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I   L +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGL-LKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGELTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIG L  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGELTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 9/190 (4%)

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
           T +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I++
Sbjct: 47  TLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQE 106

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSSL 313
           +P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  L
Sbjct: 107 FPENI-KNCKVLTVVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FGRL 160

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
             LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N ++
Sbjct: 161 TKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLT 220

Query: 374 ALPPELGLLE 383
            +P  +G L+
Sbjct: 221 FIPGFIGSLK 230



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGELT-NLRTFAADHNYLQQL 337


>gi|302813856|ref|XP_002988613.1| hypothetical protein SELMODRAFT_235567 [Selaginella moellendorffii]
 gi|300143720|gb|EFJ10409.1| hypothetical protein SELMODRAFT_235567 [Selaginella moellendorffii]
          Length = 1000

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 182/370 (49%), Gaps = 29/370 (7%)

Query: 40  ETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTL 97
           + IG+L++L  L L QN+++  IP+ +    +L   Y+ +N L+  +P ELG+L KL  L
Sbjct: 48  DEIGNLTQLTVLYLQQNQLVGKIPAELCDLTALEALYLHSNYLTGPIPPELGRLKKLAVL 107

Query: 98  DLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRS 154
            L SN+L     E  A    L  L LS NSLSG +PP IG    LR L L  N L  L  
Sbjct: 108 LLFSNELTGSIPETLANLTNLEALVLSENSLSGSIPPAIGSFPVLRVLYLDSNNLSGLIP 167

Query: 155 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 214
                P   LL  L+     N          +L ++   L ++S +LS        IP E
Sbjct: 168 -----PEIGLLPCLQKLFSNNLQGPIPPEIGNLQSLEI-LELSSNQLS------GGIPPE 215

Query: 215 IWEAGEITKLDLSRNSIQE-LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           +     +  LDL  N++   +PP++S  + L+ L L  N++       +  L SL  + L
Sbjct: 216 LGNMTSLVHLDLQFNNLSGPIPPDISLLSRLEVLSLGYNRLSGAIPYEVGLLFSLRLMYL 275

Query: 274 DNNPLR-QVPSDGFKDIPMLQILDLSYN--IASLPENPPFSSLPHLQELYLRRMQLREAP 330
            NN L   +P+D  + + ML  +DL +N    S+P+   F  LP+LQ L+L++ +L+   
Sbjct: 276 PNNSLSGHIPAD-LEHLKMLTQVDLDFNELTGSIPKQLGF--LPNLQALFLQQNKLQGKH 332

Query: 331 TDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQA 388
              +  Q    +DLS N L   +P    N + LT L+L+DN ++  +P ELG L   L +
Sbjct: 333 VHFVSDQS--AMDLSGNYLSGPVPPELGNCSLLTVLNLADNLLTGTVPEELGSLS-FLAS 389

Query: 389 LRLDGNPLRS 398
           L L+ N L  
Sbjct: 390 LVLENNQLEG 399



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 180/402 (44%), Gaps = 54/402 (13%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-IPSSIS 66
           N+LT      +A+ T L  L+ S+N L+G +P  IGS   L  L L  N +   IP  I 
Sbjct: 112 NELTGSIPETLANLTNLEALVLSENSLSGSIPPAIGSFPVLRVLYLDSNNLSGLIPPEIG 171

Query: 67  GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSL 126
               L + +  NN    +P E+G L  L  L+L SNQL                      
Sbjct: 172 LLPCLQKLF-SNNLQGPIPPEIGNLQSLEILELSSNQLS--------------------- 209

Query: 127 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP---ALLKYLRS-RLPENEDSEAST 182
            G+PPE+G MT+L  L L  N L        +GP P   +LL  L    L  N  S A  
Sbjct: 210 GGIPPELGNMTSLVHLDLQFNNL--------SGPIPPDISLLSRLEVLSLGYNRLSGAIP 261

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPPELSSC 241
            +  L+     + + +  LS        IP+++     +T++DL  N +   +P +L   
Sbjct: 262 YEVGLLFSLRLMYLPNNSLS------GHIPADLEHLKMLTQVDLDFNELTGSIPKQLGFL 315

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
            +LQ L L +NK++      +  +S  S + L  N L         +  +L +L+L+ N+
Sbjct: 316 PNLQALFLQQNKLQ---GKHVHFVSDQSAMDLSGNYLSGPVPPELGNCSLLTVLNLADNL 372

Query: 302 --ASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQ-SIPEGFK 357
              ++PE     SL  L  L L   QL  + P+ +     L  + L  N L  +IPE F 
Sbjct: 373 LTGTVPEE--LGSLSFLASLVLENNQLEGKVPSSLGNCSGLIAIRLGHNRLTGTIPESFG 430

Query: 358 NLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGNPLRS 398
            LT L   D+S N ++  +PP++GL + SL +L L+ N L+ 
Sbjct: 431 LLTHLQTFDMSFNGLTGKIPPQIGLCK-SLLSLALNDNALKG 471



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 168/396 (42%), Gaps = 48/396 (12%)

Query: 19  IASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYM 76
           + + T L  L    N L+G +P  I  LSRL  L L  NR+  +IP  +    SL   Y+
Sbjct: 216 LGNMTSLVHLDLQFNNLSGPIPPDISLLSRLEVLSLGYNRLSGAIPYEVGLLFSLRLMYL 275

Query: 77  GNNALSA-------------------------LPAELGKLSKLGTLDLHSNQLKEYCVEA 111
            NN+LS                          +P +LG L  L  L L  N+L+   V  
Sbjct: 276 PNNSLSGHIPADLEHLKMLTQVDLDFNELTGSIPKQLGFLPNLQALFLQQNKLQGKHVHF 335

Query: 112 CQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP---ALLKY 167
              + S +DLS N LSG +PPE+G  + L  L L  N        L+ G  P     L +
Sbjct: 336 VSDQ-SAMDLSGNYLSGPVPPELGNCSLLTVLNLADN--------LLTGTVPEELGSLSF 386

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
           L S + EN   E       L   +  +++      L G     IP        +   D+S
Sbjct: 387 LASLVLENNQLEGKV-PSSLGNCSGLIAIRLGHNRLTG----TIPESFGLLTHLQTFDMS 441

Query: 228 RNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
            N +  ++PP++  C SL +L L+ N +K      LT+L  L    + +N L  V     
Sbjct: 442 FNGLTGKIPPQIGLCKSLLSLALNDNALKGSIPTELTTLPILQFASMAHNKLTGVIPPTL 501

Query: 287 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL-REAPTDILRLQQLRILDLS 345
             +  LQ+L+L  N+ S        ++  L+EL L   +L    P+ +  L  L +L L 
Sbjct: 502 DSLAQLQVLNLEGNMLSGSIPAKVGAIRDLRELVLSSNRLSNNIPSSLGSLLFLTVLLLD 561

Query: 346 QNSLQ-SIPEGFKNLTSLTELDLSDNNISALPPELG 380
           +N+   +IP    N +SL  L+LS N +    P LG
Sbjct: 562 KNNFTGTIPPTLCNCSSLMRLNLSSNGLVGEIPRLG 597



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 173/377 (45%), Gaps = 32/377 (8%)

Query: 29  IASKNLLNGMPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALS-ALPA 86
           ++S  L  G+P  +G+++ L+ LDL  N +   IP  IS    L    +G N LS A+P 
Sbjct: 203 LSSNQLSGGIPPELGNMTSLVHLDLQFNNLSGPIPPDISLLSRLEVLSLGYNRLSGAIPY 262

Query: 87  ELGKLSKLGTLDLHSNQLKEYC---VEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKL 142
           E+G L  L  + L +N L  +    +E  ++ L+ +DL  N L+G +P ++G +  L+ L
Sbjct: 263 EVGLLFSLRLMYLPNNSLSGHIPADLEHLKM-LTQVDLDFNELTGSIPKQLGFLPNLQAL 321

Query: 143 LLTGNPLRT-------------LRSSLVNGPTPALLK--YLRSRLPENEDSEASTTKEDL 187
            L  N L+              L  + ++GP P  L    L + L   ++    T  E+L
Sbjct: 322 FLQQNKLQGKHVHFVSDQSAMDLSGNYLSGPVPPELGNCSLLTVLNLADNLLTGTVPEEL 381

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-LSSCASLQT 246
            +++   S+  +   LEG     +PS +     +  + L  N +    PE       LQT
Sbjct: 382 GSLSFLASLVLENNQLEG----KVPSSLGNCSGLIAIRLGHNRLTGTIPESFGLLTHLQT 437

Query: 247 LILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPMLQILDLSYNIASLP 305
             +S N +       +    SL  L L++N L+  +P++    +P+LQ   +++N  +  
Sbjct: 438 FDMSFNGLTGKIPPQIGLCKSLLSLALNDNALKGSIPTE-LTTLPILQFASMAHNKLTGV 496

Query: 306 ENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSL-QSIPEGFKNLTSLT 363
             P   SL  LQ L L    L  + P  +  ++ LR L LS N L  +IP    +L  LT
Sbjct: 497 IPPTLDSLAQLQVLNLEGNMLSGSIPAKVGAIRDLRELVLSSNRLSNNIPSSLGSLLFLT 556

Query: 364 ELDLSDNNISA-LPPEL 379
            L L  NN +  +PP L
Sbjct: 557 VLLLDKNNFTGTIPPTL 573



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 44/283 (15%)

Query: 2   SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS 60
           S +D+ GN L+      + + ++LT L  + NLL G +PE +GSLS L  L L  N++  
Sbjct: 340 SAMDLSGNYLSGPVPPELGNCSLLTVLNLADNLLTGTVPEELGSLSFLASLVLENNQLEG 399

Query: 61  -IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYC---VEACQLR 115
            +PSS+  C  L    +G+N L+  +P   G L+ L T D+  N L       +  C+  
Sbjct: 400 KVPSSLGNCSGLIAIRLGHNRLTGTIPESFGLLTHLQTFDMSFNGLTGKIPPQIGLCKSL 459

Query: 116 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR----------------TLRSSLVN 158
           LS L L++N+L G +P E+  +  L+   +  N L                  L  ++++
Sbjct: 460 LS-LALNDNALKGSIPTELTTLPILQFASMAHNKLTGVIPPTLDSLAQLQVLNLEGNMLS 518

Query: 159 GPTPALLKYLR---------SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
           G  PA +  +R         +RL  N  S   +     + +  + + T            
Sbjct: 519 GSIPAKVGAIRDLRELVLSSNRLSNNIPSSLGSLLFLTVLLLDKNNFTG----------- 567

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
            IP  +     + +L+LS N +    P L S    Q    +RN
Sbjct: 568 TIPPTLCNCSSLMRLNLSSNGLVGEIPRLGSFLRFQADSFARN 610



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 8/121 (6%)

Query: 284 DGFKDIPMLQILDLSYN--IASLPENPPFSSLPHLQELYLRRMQLRE-APTDILRLQQLR 340
           D   ++  L +L L  N  +  +P       L  L+ LYL    L    P ++ RL++L 
Sbjct: 48  DEIGNLTQLTVLYLQQNQLVGKIPAE--LCDLTALEALYLHSNYLTGPIPPELGRLKKLA 105

Query: 341 ILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDGNPLRS 398
           +L L  N L  SIPE   NLT+L  L LS+N++S  +PP +G   P L+ L LD N L  
Sbjct: 106 VLLLFSNELTGSIPETLANLTNLEALVLSENSLSGSIPPAIGSF-PVLRVLYLDSNNLSG 164

Query: 399 I 399
           +
Sbjct: 165 L 165


>gi|390459893|ref|XP_003732381.1| PREDICTED: LOW QUALITY PROTEIN: protein LAP2-like [Callithrix
           jacchus]
          Length = 1412

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 185/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY-----------CVEACQ-------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+            VEA               L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I   L +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGL-LKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIG L  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 33  SLEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG--------------FSQL 137

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 138 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 195

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 196 FTEVPE-VLEQLSGLKEFWMDANRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-ISA 251

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 252 CENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEV 311

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +L+    D N L+ +
Sbjct: 312 EALPSSIGQLT-NLRTFAADHNYLQQL 337


>gi|356538413|ref|XP_003537698.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Glycine max]
          Length = 567

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 167/384 (43%), Gaps = 108/384 (28%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           ++ +P++IG LS L+ LDL +NRI+                       ALPA +G LS L
Sbjct: 248 VDWLPDSIGKLSSLVTLDLSENRIV-----------------------ALPATIGGLSSL 284

Query: 95  GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 154
             LDLHSN++ E                      LP  +G + +L  L L GN L  L +
Sbjct: 285 TRLDLHSNRITE----------------------LPDSVGNLLSLVYLDLRGNQLTLLPA 322

Query: 155 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 214
           S              SRL                       V  +EL L    LSA+P  
Sbjct: 323 SF-------------SRL-----------------------VRLEELDLSSNQLSALPDT 346

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274
           I     +  L++  N I+ELP  + SC+SL+ L +  N++K  P+A+   + SL  L + 
Sbjct: 347 IGSLVRLKILNVETNDIEELPHSVGSCSSLRELRIDYNRLKALPEAV-GKIQSLEILSVR 405

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
            N ++Q+P+     +  L+ L++S+N + S+PE+  F++      +      +R  P  I
Sbjct: 406 YNNIKQLPT-TMSSLTNLKELNVSFNELESVPESLCFATSLVKMNIGNNFADMRSLPRSI 464

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
             L+ L  LD+S N ++ +PE F+ LT                         L+ LR + 
Sbjct: 465 GNLELLEELDISNNQIRVLPESFRMLT------------------------QLRILRAEE 500

Query: 394 NPLRSIRRTILDRGTKAVLKYLKD 417
           NPL    R I D+G +AV++Y+ +
Sbjct: 501 NPLEVPPREIADKGAQAVVQYMAE 524



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 133/267 (49%), Gaps = 18/267 (6%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I   + L  L  S+N +  +P TIG LS L RLDLH NRI  +P S+    SL    +  
Sbjct: 255 IGKLSSLVTLDLSENRIVALPATIGGLSSLTRLDLHSNRITELPDSVGNLLSLVYLDLRG 314

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L+ LPA   +L +L  LDL SNQL         L RL +L++  N +  LP  +G  +
Sbjct: 315 NQLTLLPASFSRLVRLEELDLSSNQLSALPDTIGSLVRLKILNVETNDIEELPHSVGSCS 374

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +LR+L +  N L+ L  ++  G   + L+ L  R   N   +  TT   L  +       
Sbjct: 375 SLRELRIDYNRLKALPEAV--GKIQS-LEILSVRY--NNIKQLPTTMSSLTNL------- 422

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRN--SIQELPPELSSCASLQTLILSRNKIK 255
            KEL++    L ++P  +  A  + K+++  N   ++ LP  + +   L+ L +S N+I+
Sbjct: 423 -KELNVSFNELESVPESLCFATSLVKMNIGNNFADMRSLPRSIGNLELLEELDISNNQIR 481

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVP 282
             P++    L+ L  L+ + NPL +VP
Sbjct: 482 VLPES-FRMLTQLRILRAEENPL-EVP 506



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 90/214 (42%), Gaps = 50/214 (23%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ GN+LT+L  +  +    L EL  S N L+ +P+TIGSL RL  L++  N I  +P 
Sbjct: 310 LDLRGNQLTLLPASF-SRLVRLEELDLSSNQLSALPDTIGSLVRLKILNVETNDIEELPH 368

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY---------------- 107
           S+  C SL E  +  N L ALP  +GK+  L  L +  N +K+                 
Sbjct: 369 SVGSCSSLRELRIDYNRLKALPEAVGKIQSLEILSVRYNNIKQLPTTMSSLTNLKELNVS 428

Query: 108 -----------CVEACQLRLSV----------------------LDLSNNSLSGLPPEIG 134
                      C     +++++                      LD+SNN +  LP    
Sbjct: 429 FNELESVPESLCFATSLVKMNIGNNFADMRSLPRSIGNLELLEELDISNNQIRVLPESFR 488

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
            +T LR L    NPL      + +    A+++Y+
Sbjct: 489 MLTQLRILRAEENPLEVPPREIADKGAQAVVQYM 522



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 54/115 (46%), Gaps = 5/115 (4%)

Query: 271 LKLDNNPLRQVP--SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 327
           LKL N  + QV    D    +  L  LDLS N I +LP       L  L  L L   ++ 
Sbjct: 238 LKLQNKLMDQVDWLPDSIGKLSSLVTLDLSENRIVALPAT--IGGLSSLTRLDLHSNRIT 295

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
           E P  +  L  L  LDL  N L  +P  F  L  L ELDLS N +SALP  +G L
Sbjct: 296 ELPDSVGNLLSLVYLDLRGNQLTLLPASFSRLVRLEELDLSSNQLSALPDTIGSL 350


>gi|124002243|ref|ZP_01687097.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992709|gb|EAY32054.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 478

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 180/395 (45%), Gaps = 37/395 (9%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN-----RILSIPSSISGCCSLAE 73
           IA  T L EL  + N L  +P+    L  L RL L  N     R++              
Sbjct: 68  IALLTNLKELNLNWNKLRRLPKVFVRLQTLERLYLTDNSHINLRLIFKKLRKLKNLKELS 127

Query: 74  FYMGNNALSALPAELGKLSKLGTLDL---HSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 129
           F  G   L +LPAE   L  L  + L   +  +L     +  QL +L  LD+  N +  +
Sbjct: 128 F--GWRKLRSLPAEFTDLKSLEAVGLRLKNDTKLARIFNQLSQLPKLKKLDMQRNYMLEI 185

Query: 130 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 189
            PEIG++  L+ L L  N L  L S    G     LK LR+    + D +      D+ +
Sbjct: 186 APEIGELRNLQVLNLHSNKLNKLPSR-TRG-----LKNLRALYLSSNDFK------DIPS 233

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
                S  +K L L    + + PS I    ++  L++S NSI ELP  +    +LQ L  
Sbjct: 234 YIGGFSELTK-LDLSVNKIESFPSRIGNLKKLKHLNISENSIVELPKSIGGLRNLQHLDA 292

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPP 309
           ++N++ + P +I  +L  L  L L  N  +++P      +PML+ LDLS N      +  
Sbjct: 293 NKNQLNEVPSSI-KNLKKLEHLNLSANYFKKLPK-SLGSLPMLRTLDLSNN-----PDLA 345

Query: 310 FSSLPHLQELYLRRMQ-----LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
           FS     + L LR++        + P DIL++ +LR+LDL  NSL+ I +    L  L E
Sbjct: 346 FSGFLSAKLLRLRKLHVAGNNFEKIPRDILQIPKLRVLDLESNSLKKIGKSIAKLKYLKE 405

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L+LS N  S  P E+ L   SL+ L LD N +  I
Sbjct: 406 LNLSKNQFSQFPEEV-LKLTSLEVLNLDFNRITYI 439



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 114/261 (43%), Gaps = 37/261 (14%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L  L  S N    +P  IG  S L +LDL  N+I S PS I     L    +  N++  L
Sbjct: 218 LRALYLSSNDFKDIPSYIGGFSELTKLDLSVNKIESFPSRIGNLKKLKHLNISENSIVEL 277

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +G L  L  LD + NQL E       L +L  L+LS N    LP  +G +  LR L 
Sbjct: 278 PKSIGGLRNLQHLDANKNQLNEVPSSIKNLKKLEHLNLSANYFKKLPKSLGSLPMLRTL- 336

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
                       L N P  A   +L ++L                       +  ++L +
Sbjct: 337 -----------DLSNNPDLAFSGFLSAKL-----------------------LRLRKLHV 362

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
            G N   IP +I +  ++  LDL  NS++++   ++    L+ L LS+N+   +P+ +L 
Sbjct: 363 AGNNFEKIPRDILQIPKLRVLDLESNSLKKIGKSIAKLKYLKELNLSKNQFSQFPEEVL- 421

Query: 264 SLSSLSCLKLDNNPLRQVPSD 284
            L+SL  L LD N +  +P D
Sbjct: 422 KLTSLEVLNLDFNRITYIPDD 442



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 117/264 (44%), Gaps = 43/264 (16%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I  ++ LT+L  S N +   P  IG+L +L  L++ +N I+ +P SI G  +L       
Sbjct: 235 IGGFSELTKLDLSVNKIESFPSRIGNLKKLKHLNISENSIVELPKSIGGLRNLQHLDANK 294

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN---SLSGLPPEIG 134
           N L+ +P+ +  L KL  L+L +N  K+       L  L  LDLSNN   + SG      
Sbjct: 295 NQLNEVPSSIKNLKKLEHLNLSANYFKKLPKSLGSLPMLRTLDLSNNPDLAFSGFLS--A 352

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
           K+  LRKL + GN    +   ++  P                                +L
Sbjct: 353 KLLRLRKLHVAGNNFEKIPRDILQIP--------------------------------KL 380

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
            V    L LE  +L  I   I +   + +L+LS+N   + P E+    SL+ L L  N+I
Sbjct: 381 RV----LDLESNSLKKIGKSIAKLKYLKELNLSKNQFSQFPEEVLKLTSLEVLNLDFNRI 436

Query: 255 KDWPDAILTSLSSLSCLKLDNNPL 278
              PD I ++LS+L  + L  NP+
Sbjct: 437 TYIPDDI-STLSNLKEIWLRYNPI 459



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 166/411 (40%), Gaps = 97/411 (23%)

Query: 81  LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 140
           +S+L    G  +  G   +  ++L +   EA   ++ +LDL    +  LP EI  +T L+
Sbjct: 18  VSSLAFSQGGFNDKGDERIVYHKLSQALKEAD--KVEILDLKWQYIRYLPSEIALLTNLK 75

Query: 141 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 200
           +L L  N LR L    V   T   L YL         ++ S     LI    R     KE
Sbjct: 76  ELNLNWNKLRRLPKVFVRLQTLERL-YL---------TDNSHINLRLIFKKLRKLKNLKE 125

Query: 201 LSLEGMNLSAIPSEIWEAG--------------------------EITKLDLSRNSIQEL 234
           LS     L ++P+E  +                            ++ KLD+ RN + E+
Sbjct: 126 LSFGWRKLRSLPAEFTDLKSLEAVGLRLKNDTKLARIFNQLSQLPKLKKLDMQRNYMLEI 185

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS--DGFKDIPML 292
            PE+    +LQ L L  NK+   P      L +L  L L +N  + +PS   GF +   L
Sbjct: 186 APEIGELRNLQVLNLHSNKLNKLPSRT-RGLKNLRALYLSSNDFKDIPSYIGGFSE---L 241

Query: 293 QILDLSYN-IASLP---------------EN------PPFSSLPHLQELYLRRMQLREAP 330
             LDLS N I S P               EN           L +LQ L   + QL E P
Sbjct: 242 TKLDLSVNKIESFPSRIGNLKKLKHLNISENSIVELPKSIGGLRNLQHLDANKNQLNEVP 301

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD--------------------- 369
           + I  L++L  L+LS N  + +P+   +L  L  LDLS+                     
Sbjct: 302 SSIKNLKKLEHLNLSANYFKKLPKSLGSLPMLRTLDLSNNPDLAFSGFLSAKLLRLRKLH 361

Query: 370 ---NNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
              NN   +P ++ L  P L+ L L+ N L+ I ++I      A LKYLK+
Sbjct: 362 VAGNNFEKIPRDI-LQIPKLRVLDLESNSLKKIGKSI------AKLKYLKE 405



 Score = 43.1 bits (100), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 1/80 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+E N L  +  + IA    L EL  SKN  +  PE +  L+ L  L+L  NRI  IP 
Sbjct: 383 LDLESNSLKKIGKS-IAKLKYLKELNLSKNQFSQFPEEVLKLTSLEVLNLDFNRITYIPD 441

Query: 64  SISGCCSLAEFYMGNNALSA 83
            IS   +L E ++  N +S+
Sbjct: 442 DISTLSNLKEIWLRYNPISS 461


>gi|386766571|ref|NP_001247319.1| scribbled, isoform N [Drosophila melanogaster]
 gi|383292967|gb|AFH06636.1| scribbled, isoform N [Drosophila melanogaster]
          Length = 2554

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 125/265 (47%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N                          E++          
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC-------------------------ENM---------- 292

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 293 -QELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|418688836|ref|ZP_13249971.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361994|gb|EJP17947.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 333

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 137/284 (48%), Gaps = 19/284 (6%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS   L  LP +IG++  L++L L  N L T+   +       +L +      
Sbjct: 48  LDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQVLDF------ 101

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
               S   TT    I     L V    L L    L+ +P EI +   +  L+L  N +  
Sbjct: 102 ---GSNQITTLSQEIGQLQNLKV----LFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLIT 154

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E++   +LQ L LS N++   P  I   L  L  L L NN L  +P +    +  LQ
Sbjct: 155 LPKEIAQLKNLQELYLSENQLMTLPKEI-GQLEKLQELNLWNNQLITLPKE-IAQLKNLQ 212

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L LS N + +LP+      L  LQ+LYL   QL   P +I +LQ L++L LS N  ++I
Sbjct: 213 ELYLSENQLMTLPK--EIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQVLFLSYNQFKTI 270

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           P  F  L +L EL+L  N ++ +P E+G L+ +LQ L L  N  
Sbjct: 271 PVEFGQLKNLQELNLDANQLTTIPKEIGQLQ-NLQTLYLRNNQF 313



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 111/252 (44%), Gaps = 38/252 (15%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD   N++T LS   I     L  L  + N L  +P+ IG L  L  L+L  N+++++P 
Sbjct: 99  LDFGSNQITTLSQE-IGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPK 157

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I+   +L E Y+  N L  LP E+G+L KL  L+L +NQL     E  QL+ L  L LS
Sbjct: 158 EIAQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPKEIAQLKNLQELYLS 217

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L  LP EIG++  L+KL L  N L T+ +                            
Sbjct: 218 ENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNE--------------------------- 250

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                I     L V    L L       IP E  +   + +L+L  N +  +P E+    
Sbjct: 251 -----IAQLQNLQV----LFLSYNQFKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQ 301

Query: 243 SLQTLILSRNKI 254
           +LQTL L  N+ 
Sbjct: 302 NLQTLYLRNNQF 313



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 133/304 (43%), Gaps = 40/304 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+   KL  L    I     L EL    N L  + + I  L  L  LD   N+I ++  
Sbjct: 53  LDLSEQKLKALPKK-IGQLKNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQ 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L   ++ NN L+ LP E+G+L  L TL+L +NQL     E  QL+ L  L LS
Sbjct: 112 EIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L  LP EIG++  L++L L  N L TL   +      A LK L+             
Sbjct: 172 ENQLMTLPKEIGQLEKLQELNLWNNQLITLPKEI------AQLKNLQ------------- 212

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                            EL L    L  +P EI +  ++ KL L+ N +  +P E++   
Sbjct: 213 -----------------ELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQ 255

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           +LQ L LS N+ K  P      L +L  L LD N L  +P +    +  LQ L L  N  
Sbjct: 256 NLQVLFLSYNQFKTIP-VEFGQLKNLQELNLDANQLTTIPKE-IGQLQNLQTLYLRNNQF 313

Query: 303 SLPE 306
           S+ E
Sbjct: 314 SIEE 317


>gi|157128242|ref|XP_001661361.1| LAP4 protein (Scribble protein) (Smell-impaired protein) [Aedes
           aegypti]
 gi|108882248|gb|EAT46473.1| AAEL002336-PA, partial [Aedes aegypti]
          Length = 626

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 171/374 (45%), Gaps = 43/374 (11%)

Query: 40  ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 99
           +    L RL +L L  N I+ +PS I    +L E  +  N +  +P ++  L  L  LD 
Sbjct: 1   QNFFRLHRLRKLGLSDNEIIKLPSDIQNFENLVELDVSRNDIGDIPDDIKHLRSLQILDF 60

Query: 100 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
            SN +        QLR L++L L++ SL+ LP + G ++ L  L L  N L+ L  S+  
Sbjct: 61  SSNPIHRLPAGFSQLRNLTILGLNDMSLTSLPQDFGCLSKLESLELRENLLKHLPESIS- 119

Query: 159 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 218
                L    R  L +NE  E       L  +        +EL L+   L  +P EI   
Sbjct: 120 ----QLTNLERLDLGDNEIEELPPHLGYLPAL--------QELWLDHNQLQKLPPEIGLL 167

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
             +  LD+S N ++ELP E+    +L  L LS+N ++  PD I + L+ L+ LKLD N L
Sbjct: 168 KNLVCLDVSENRMEELPEEIGGLENLTDLHLSQNLLEVLPDGI-SKLTKLTILKLDQNRL 226

Query: 279 RQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
                                   +L EN       ++QEL L    L E P  I  +  
Sbjct: 227 H-----------------------TLNEN--IGQCVNMQELILTENFLNELPYTIGNMTM 261

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG-LLEPSLQALRLDGNPLR 397
           L  L++ +NSL S+P    N  +L  L L +N ++ LP ELG  LE  L  L + GN L+
Sbjct: 262 LNNLNVDRNSLISVPSELGNCKNLGVLSLRENKLTKLPSELGNCLE--LHVLDVSGNRLQ 319

Query: 398 SIRRTILDRGTKAV 411
            +  ++++   KAV
Sbjct: 320 HLPYSLVNLQLKAV 333



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 171/377 (45%), Gaps = 44/377 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N++  L ++ I ++  L EL  S+N +  +P+ I  L  L  LD   N I  
Sbjct: 9   LRKLGLSDNEIIKLPSD-IQNFENLVELDVSRNDIGDIPDDIKHLRSLQILDFSSNPIHR 67

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+  S   +L    + + +L++LP + G LSKL +L+L  N LK       QL  L  L
Sbjct: 68  LPAGFSQLRNLTILGLNDMSLTSLPQDFGCLSKLESLELRENLLKHLPESISQLTNLERL 127

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDS 178
           DL +N +  LPP +G +  L++L L  N L+ L       P   LLK L    + EN   
Sbjct: 128 DLGDNEIEELPPHLGYLPALQELWLDHNQLQKL------PPEIGLLKNLVCLDVSENRME 181

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E       L  +         +L L    L  +P  I +  ++T L L +N +  L   +
Sbjct: 182 ELPEEIGGLENLT--------DLHLSQNLLEVLPDGISKLTKLTILKLDQNRLHTLNENI 233

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
             C ++Q LIL+ N + + P  I  +++ L+ L +D N L  VPS+              
Sbjct: 234 GQCVNMQELILTENFLNELPYTI-GNMTMLNNLNVDRNSLISVPSE-------------- 278

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
                        +  +L  L LR  +L + P+++    +L +LD+S N LQ +P    N
Sbjct: 279 -----------LGNCKNLGVLSLRENKLTKLPSELGNCLELHVLDVSGNRLQHLPYSLVN 327

Query: 359 LTSLTELDLSDNNISAL 375
           L  L  + LS+N    L
Sbjct: 328 L-QLKAVWLSENQAQPL 343



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 76/137 (55%), Gaps = 4/137 (2%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L+ N I     + ELI ++N LN +P TIG+++ L  L++ +N ++S+PS
Sbjct: 219 LKLDQNRLHTLNEN-IGQCVNMQELILTENFLNELPYTIGNMTMLNNLNVDRNSLISVPS 277

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            +  C +L    +  N L+ LP+ELG   +L  LD+  N+L+        L+L  + LS 
Sbjct: 278 ELGNCKNLGVLSLRENKLTKLPSELGNCLELHVLDVSGNRLQHLPYSLVNLQLKAVWLSE 337

Query: 124 NS---LSGLPPEIGKMT 137
           N    L    P+I ++T
Sbjct: 338 NQAQPLLTFQPDIDEVT 354


>gi|92097612|gb|AAI15016.1| ERBB2IP protein [Homo sapiens]
          Length = 1367

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 186/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP    ++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFDRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 TCENLQDLLLSSNSLQQLPETI-GSLKNITTLKIDENQLMYLP-DSIGGLISVEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 232 LTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ L T     N L++   E    + ++VL
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 40/257 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T +   ++   + L E     N L  +P  IGSL +L  LD+ +N I  
Sbjct: 186 LERLDLGSNEFTEVPE-VLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEM 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-- 118
           +   IS C +L +  + +N+L  LP  +G L  + TL +  NQL  Y  ++    +SV  
Sbjct: 245 VEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLM-YLPDSIGGLISVEE 303

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LD S N +  LP  IG++T LR      N                   YL+   PE    
Sbjct: 304 LDCSFNEVEALPSSIGQLTNLRTFAADHN-------------------YLQQLPPE---- 340

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                    I     ++V    L L    L  +P E+ +  ++  ++LS N ++ LP   
Sbjct: 341 ---------IGSWKNITV----LFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 239 SSCASLQTLILSRNKIK 255
           +    L  + LS N+ K
Sbjct: 388 TKLQQLTAMWLSDNQSK 404


>gi|442621260|ref|NP_001262988.1| scribbled, isoform T [Drosophila melanogaster]
 gi|440217925|gb|AGB96368.1| scribbled, isoform T [Drosophila melanogaster]
          Length = 2444

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 125/265 (47%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N                          E++          
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC-------------------------ENM---------- 292

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  ++  L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 293 -QELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|421118977|ref|ZP_15579304.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348317|gb|EKO99143.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 333

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 137/284 (48%), Gaps = 19/284 (6%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VLDLS   L  LP +IG++  L++L L  N L T+   +       +L +      
Sbjct: 48  LDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQVLDF------ 101

Query: 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 233
               S   TT    I     L V    L L    L+ +P EI +   +  L+L  N +  
Sbjct: 102 ---GSNQITTLSQEIGQLQNLKV----LFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLIT 154

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E++   +LQ L LS N++   P  I   L  L  L L NN L  +P +    +  LQ
Sbjct: 155 LPKEIAQLKNLQELYLSENQLMTLPKEI-GQLEKLQELNLWNNQLITLPKE-IAQLKNLQ 212

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
            L LS N + +LP+      L  LQ+LYL   QL   P +I +LQ L++L LS N  ++I
Sbjct: 213 ELYLSENQLMTLPK--EIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQVLFLSYNQFKTI 270

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           P  F  L +L EL+L  N ++ +P E+G L+ +LQ L L  N  
Sbjct: 271 PVEFGQLKNLQELNLDANQLTTIPKEIGQLQ-NLQTLYLRNNQF 313



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 111/252 (44%), Gaps = 38/252 (15%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD   N++T LS   I     L  L  + N L  +P+ IG L  L  L+L  N+++++P 
Sbjct: 99  LDFGSNQITTLSQE-IGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPK 157

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I+   +L E Y+  N L  LP E+G+L KL  L+L +NQL     E  QL+ L  L LS
Sbjct: 158 EIAQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPKEIAQLKNLQELYLS 217

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L  LP EIG++  L+KL L  N L T+ +                            
Sbjct: 218 ENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNE--------------------------- 250

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                I     L V    L L       IP E  +   + +L+L  N +  +P E+    
Sbjct: 251 -----IAQLQNLQV----LFLSYNQFKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQ 301

Query: 243 SLQTLILSRNKI 254
           +LQTL L  N+ 
Sbjct: 302 NLQTLYLRNNQF 313



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 133/304 (43%), Gaps = 40/304 (13%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+   KL  L    I     L EL    N L  + + I  L  L  LD   N+I ++  
Sbjct: 53  LDLSEQKLKALPKK-IGQLKNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQ 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    +L   ++ NN L+ LP E+G+L  L TL+L +NQL     E  QL+ L  L LS
Sbjct: 112 EIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLS 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L  LP EIG++  L++L L  N L TL   +      A LK L+             
Sbjct: 172 ENQLMTLPKEIGQLEKLQELNLWNNQLITLPKEI------AQLKNLQ------------- 212

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                            EL L    L  +P EI +  ++ KL L+ N +  +P E++   
Sbjct: 213 -----------------ELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQ 255

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302
           +LQ L LS N+ K  P      L +L  L LD N L  +P +    +  LQ L L  N  
Sbjct: 256 NLQVLFLSYNQFKTIP-VEFGQLKNLQELNLDANQLTTIPKE-IGQLQNLQTLYLRNNQF 313

Query: 303 SLPE 306
           S+ E
Sbjct: 314 SIEE 317


>gi|455791544|gb|EMF43351.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 356

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 150/325 (46%), Gaps = 42/325 (12%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L+L   ++ ++P  I    +L    + NN    LP E+G+L  L  L+L +NQLK    E
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKE 112

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L  L LS N L+  P EIG++  L+KL L  N L TL   +  G   +L K   
Sbjct: 113 IGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEI--GQLQSLQK--- 167

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                                          L+L+   L A+P+EI +   + +L LS N
Sbjct: 168 -------------------------------LNLDKNRLKALPNEIGQLQNLQELYLSNN 196

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            +  LP E+    +LQ LIL  N++   P  I   L +L  L   NN L  +P +    +
Sbjct: 197 QLTILPEEIGQLKNLQALILGDNQLTILPKEI-GQLQNLKLLYSVNNELTILPQE-IGQL 254

Query: 290 PMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
             LQ L LS+N + +LP+      L +LQELYL   QL   P +I +L+ L+      N 
Sbjct: 255 QKLQYLYLSHNQLTTLPK--EIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQ 312

Query: 349 LQSIPEGFKNLTSLTELDLSDNNIS 373
           L  +P     L +L  L L++N +S
Sbjct: 313 LTMLPNEIGQLQNLQWLKLNNNQLS 337



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 146/305 (47%), Gaps = 63/305 (20%)

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 138
            L+ LP E+ +L  L +LDL +NQ K    E  QL+ L  L+L NN L  LP EIG++ +
Sbjct: 59  KLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQS 118

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L+ L+L+ N L T          P  +  L++                            
Sbjct: 119 LQTLILSVNRLTTF---------PQEIGQLKNL--------------------------- 142

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L+L+   L+ +  EI +   + KL+L +N ++ LP E+    +LQ L LS N++   P
Sbjct: 143 QKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILP 202

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 318
           + I   L +L  L L +N L  +P    K+I  LQ L L Y++ +               
Sbjct: 203 EEI-GQLKNLQALILGDNQLTILP----KEIGQLQNLKLLYSVNN--------------- 242

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
                 +L   P +I +LQ+L+ L LS N L ++P+    L +L EL L+DN ++ LP E
Sbjct: 243 ------ELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKE 296

Query: 379 LGLLE 383
           +G L+
Sbjct: 297 IGQLK 301



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 140/313 (44%), Gaps = 35/313 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++   KLT L    I     L  L  + N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 53  LNLSSQKLTTLPKE-IKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            I    SL    +  N L+  P E+G+L  L  L+L  NQL     E  QL+ L  L+L 
Sbjct: 112 EIGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLD 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L  LP EIG++  L++L L+ N L  L   +        LK L++            
Sbjct: 172 KNRLKALPNEIGQLQNLQELYLSNNQLTILPEEI------GQLKNLQA------------ 213

Query: 183 TKEDLITMATRLSVTSKELS-------LEGMN--LSAIPSEIWEAGEITKLDLSRNSIQE 233
               LI    +L++  KE+        L  +N  L+ +P EI +  ++  L LS N +  
Sbjct: 214 ----LILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTT 269

Query: 234 LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           LP E+    +LQ L L+ N++   P  I   L +L      NN L  +P++    +  LQ
Sbjct: 270 LPKEIGQLENLQELYLNDNQLTTLPKEI-GQLKNLQTFISFNNQLTMLPNE-IGQLQNLQ 327

Query: 294 ILDLSYNIASLPE 306
            L L+ N  S  E
Sbjct: 328 WLKLNNNQLSFQE 340



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 148/298 (49%), Gaps = 24/298 (8%)

Query: 114 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173
           L + VL+LS+  L+ LP EI ++  L+ L L  N  +TL   +        L    ++L 
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQL- 106

Query: 174 ENEDSEASTTK--EDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEIT 222
           +N   E    +  + LI    RL+   +E         L+L+   L+ +  EI +   + 
Sbjct: 107 KNLPKEIGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQ 166

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           KL+L +N ++ LP E+    +LQ L LS N++   P+ I   L +L  L L +N L  +P
Sbjct: 167 KLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEI-GQLKNLQALILGDNQLTILP 225

Query: 283 SDGFKDIPMLQILDLSYNIAS----LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
               K+I  LQ L L Y++ +    LP+      L  LQ LYL   QL   P +I +L+ 
Sbjct: 226 ----KEIGQLQNLKLLYSVNNELTILPQ--EIGQLQKLQYLYLSHNQLTTLPKEIGQLEN 279

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
           L+ L L+ N L ++P+    L +L      +N ++ LP E+G L+ +LQ L+L+ N L
Sbjct: 280 LQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPNEIGQLQ-NLQWLKLNNNQL 336



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 102/197 (51%), Gaps = 5/197 (2%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A +  +  + L+L    L+ +P EI +   +  LDL+ N  + LP E+    +LQ L
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQEL 99

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            L  N++K+ P  I   L SL  L L  N L   P +    +  LQ L+L YN + +L +
Sbjct: 100 NLWNNQLKNLPKEI-GQLQSLQTLILSVNRLTTFPQE-IGQLKNLQKLNLDYNQLTTLLQ 157

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                 L  LQ+L L + +L+  P +I +LQ L+ L LS N L  +PE    L +L  L 
Sbjct: 158 --EIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALI 215

Query: 367 LSDNNISALPPELGLLE 383
           L DN ++ LP E+G L+
Sbjct: 216 LGDNQLTILPKEIGQLQ 232


>gi|427720310|ref|YP_007068304.1| adenylate cyclase [Calothrix sp. PCC 7507]
 gi|427352746|gb|AFY35470.1| Adenylate cyclase [Calothrix sp. PCC 7507]
          Length = 317

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 154/335 (45%), Gaps = 50/335 (14%)

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 125
           +    + E  +  N L+ALP E+GKL++L  L L   Q   Y  E       ++D+  N+
Sbjct: 13  AATEGVTELDLSGNNLTALPPEIGKLTQLKKLILGKYQ---YDQEGY-----IVDIIGNN 64

Query: 126 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 185
           LS LP E+G +  L +LL+  N L TL S+                              
Sbjct: 65  LSALPKELGLLNQLEELLVLANHLTTLPSA------------------------------ 94

Query: 186 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 245
             I   T L    +   L+   LS++P EI +   +  LD+  N +  LP E+   + LQ
Sbjct: 95  --IGQLTNL----QTFVLKYNQLSSLPREIGQLSHLQLLDIRSNQLSSLPREIGQLSHLQ 148

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASL 304
            L L  N++   P  I   L++L  L L +N L  +P +    +  LQ L L  N +  L
Sbjct: 149 LLYLRSNQLSSLPREI-EQLTNLRSLDLGDNQLSSLPRE-IGQLFNLQSLYLYKNRLIDL 206

Query: 305 PENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTE 364
           P       L HL+ L L   QL   P +I +L  LR L L +N L S+P  F  LT+L  
Sbjct: 207 PS--EIGQLSHLESLNLGDNQLSNLPREIGQLSNLRSLGLGENQLSSLPNEFTQLTNLQR 264

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           LDLS N +S+LP ++G L  +LQ L L  N L S+
Sbjct: 265 LDLSFNQLSSLPKKIGQL-TNLQWLILHNNQLSSL 298



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 146/299 (48%), Gaps = 30/299 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASK--------------NLLNGMPETIGSLS 46
           +++LD+ GN LT L    I   T L +LI  K              N L+ +P+ +G L+
Sbjct: 18  VTELDLSGNNLTALPPE-IGKLTQLKKLILGKYQYDQEGYIVDIIGNNLSALPKELGLLN 76

Query: 47  RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 106
           +L  L +  N + ++PS+I    +L  F +  N LS+LP E+G+LS L  LD+ SNQL  
Sbjct: 77  QLEELLVLANHLTTLPSAIGQLTNLQTFVLKYNQLSSLPREIGQLSHLQLLDIRSNQLSS 136

Query: 107 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 165
              E  QL  L +L L +N LS LP EI ++T LR L L  N L +L   +        L
Sbjct: 137 LPREIGQLSHLQLLYLRSNQLSSLPREIEQLTNLRSLDLGDNQLSSLPREIGQLFNLQSL 196

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 225
              ++RL             DL +   +LS   + L+L    LS +P EI +   +  L 
Sbjct: 197 YLYKNRLI------------DLPSEIGQLSHL-ESLNLGDNQLSNLPREIGQLSNLRSLG 243

Query: 226 LSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           L  N +  LP E +   +LQ L LS N++   P  I   L++L  L L NN L  +PS+
Sbjct: 244 LGENQLSSLPNEFTQLTNLQRLDLSFNQLSSLPKKI-GQLTNLQWLILHNNQLSSLPSE 301



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 159/366 (43%), Gaps = 79/366 (21%)

Query: 20  ASWTMLTELIASKNLLNGMPETIGSLSRLIRL--------------DLHQNRILSIPSSI 65
           A+   +TEL  S N L  +P  IG L++L +L              D+  N + ++P  +
Sbjct: 13  AATEGVTELDLSGNNLTALPPEIGKLTQLKKLILGKYQYDQEGYIVDIIGNNLSALPKEL 72

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 124
                L E  +  N L+ LP+ +G+L+ L T  L  NQL     E  QL  L +LD+ +N
Sbjct: 73  GLLNQLEELLVLANHLTTLPSAIGQLTNLQTFVLKYNQLSSLPREIGQLSHLQLLDIRSN 132

Query: 125 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 184
            LS LP EIG+++ L+ L                        YLRS              
Sbjct: 133 QLSSLPREIGQLSHLQLL------------------------YLRSN------------- 155

Query: 185 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 244
                                  LS++P EI +   +  LDL  N +  LP E+    +L
Sbjct: 156 ----------------------QLSSLPREIEQLTNLRSLDLGDNQLSSLPREIGQLFNL 193

Query: 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IAS 303
           Q+L L +N++ D P  I   LS L  L L +N L  +P +    +  L+ L L  N ++S
Sbjct: 194 QSLYLYKNRLIDLPSEI-GQLSHLESLNLGDNQLSNLPRE-IGQLSNLRSLGLGENQLSS 251

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
           LP    F+ L +LQ L L   QL   P  I +L  L+ L L  N L S+P     LT+L 
Sbjct: 252 LPN--EFTQLTNLQRLDLSFNQLSSLPKKIGQLTNLQWLILHNNQLSSLPSEIGQLTNLR 309

Query: 364 ELDLSD 369
            LDL+D
Sbjct: 310 SLDLAD 315



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 123/269 (45%), Gaps = 47/269 (17%)

Query: 10  KLTVLSNNL------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +L VL+N+L      I   T L   +   N L+ +P  IG LS L  LD+  N++ S+P 
Sbjct: 80  ELLVLANHLTTLPSAIGQLTNLQTFVLKYNQLSSLPREIGQLSHLQLLDIRSNQLSSLPR 139

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I     L   Y+ +N LS+LP E+ +L+ L +LDL  NQL     E  QL  L  L L 
Sbjct: 140 EIGQLSHLQLLYLRSNQLSSLPREIEQLTNLRSLDLGDNQLSSLPREIGQLFNLQSLYLY 199

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAS 181
            N L  LP EIG+++ L  L L  N L  L   +        L  LRS  L EN+     
Sbjct: 200 KNRLIDLPSEIGQLSHLESLNLGDNQLSNLPREI------GQLSNLRSLGLGENQ----- 248

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
                                     LS++P+E  +   + +LDLS N +  LP ++   
Sbjct: 249 --------------------------LSSLPNEFTQLTNLQRLDLSFNQLSSLPKKIGQL 282

Query: 242 ASLQTLILSRNKIKDWPDAI--LTSLSSL 268
            +LQ LIL  N++   P  I  LT+L SL
Sbjct: 283 TNLQWLILHNNQLSSLPSEIGQLTNLRSL 311


>gi|194745132|ref|XP_001955046.1| GF16442 [Drosophila ananassae]
 gi|190628083|gb|EDV43607.1| GF16442 [Drosophila ananassae]
          Length = 1847

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEINRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCVNMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPPSIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEINRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 123/265 (46%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N                                     V 
Sbjct: 268 RLTILKLDQNRLQRLNDTLGN------------------------------------CVN 291

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P  I +  +++ L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 292 MQELILTENFLSELPPSIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLETL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP  P    +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCVNMQELILTENFLSELP--PSIGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 SNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 24/337 (7%)

Query: 65  ISGCCSLAEFYMGNN-ALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQL-RLSVLDL 121
             GC    EF    + +L  +P E+ + S+ L  L L +N +++      +L RL  L L
Sbjct: 8   FKGCNRQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGL 67

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 181
           S+N ++ LPP+I     L +L ++ N +  +         P  +K+L+S    +  S   
Sbjct: 68  SDNEINRLPPDIQNFENLVELDVSRNDIPDI---------PDDIKHLQSLQVADFSSNPI 118

Query: 182 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
                  +    L+V    L L  M+L+ +P++     ++  L+L  N ++ LP  +S  
Sbjct: 119 PKLPSGFSQLKNLTV----LGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQL 174

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKDIPMLQILDLSYN 300
             L+ L L  N+I+D P   L  L  L  L LD+N L+++P + G   +  L  LD+S N
Sbjct: 175 TKLKRLDLGDNEIEDLP-PYLGYLPGLHELWLDHNQLQRLPPELGL--LTKLTYLDVSEN 231

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            +  LP     S L  L +L L +  L   P  I +L +L IL L QN LQ + +   N 
Sbjct: 232 RLEELPNE--ISGLVSLTDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNC 289

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            ++ EL L++N +S LPP +G +   L  L +D N L
Sbjct: 290 VNMQELILTENFLSELPPSIGQMT-KLSNLNVDRNAL 325



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCVNMQELILTENFLSELPPSIGQMTKLSNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|359727309|ref|ZP_09266005.1| hypothetical protein Lwei2_10285 [Leptospira weilii str.
           2006001855]
          Length = 455

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 164/359 (45%), Gaps = 64/359 (17%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P+ IG L  L RL+L  NR+ ++P  I    +L E  + +N L  LP E+G+L  L  L
Sbjct: 113 LPQEIGRLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEIGRLQNLEQL 172

Query: 98  DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           +L  N+L     E  QL +L  L +++N L+ LP EIG++  L++LLL  N L TL   +
Sbjct: 173 NLSGNRLTTLPQEIGQLKKLEWLHVNHNRLTVLPKEIGQLQNLKELLLYDNSLTTLPEEI 232

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                  L K+                               K+L L    L+ +P  + 
Sbjct: 233 -----GQLQKF-------------------------------KQLVLHENQLTTLPQGLC 256

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           +   + ++ L +N +  LP E+    +LQ L LS N++K  P  I               
Sbjct: 257 KLQNLERIYLHQNRLTSLPQEIGQLQNLQELHLSSNQLKTLPKEI--------------- 301

Query: 277 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
                     K   +  +   +  + +LP+      L +L  L L+  +L   P +I +L
Sbjct: 302 ---------EKLHNLQILNLNNNELTALPKE--IGQLQNLYGLNLKLNKLTILPKEIGQL 350

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           Q +R LDLS N L ++P     L  L  L+LS N++++ P E+G L+ +L+ LRL G P
Sbjct: 351 QNMRDLDLSDNQLTTLPSEIGQLKKLHSLNLSGNSLTSFPKEIGKLQ-NLKFLRLRGIP 408



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 135/306 (44%), Gaps = 49/306 (16%)

Query: 1   MSKLDVEGNKLTVL----------------SNNLI------ASWTMLTELIASKNLLNGM 38
           + +L++ GN+LT L                SN LI           L +L  S N L  +
Sbjct: 123 LERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEIGRLQNLEQLNLSGNRLTTL 182

Query: 39  PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 98
           P+ IG L +L  L ++ NR+  +P  I    +L E  + +N+L+ LP E+G+L K   L 
Sbjct: 183 PQEIGQLKKLEWLHVNHNRLTVLPKEIGQLQNLKELLLYDNSLTTLPEEIGQLQKFKQLV 242

Query: 99  LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
           LH NQL       C+L+ L  + L  N L+ LP EIG++  L++L L+ N L+TL   + 
Sbjct: 243 LHENQLTTLPQGLCKLQNLERIYLHQNRLTSLPQEIGQLQNLQELHLSSNQLKTLPKEI- 301

Query: 158 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL-SLEGMN-----LSAI 211
                             E               T L     +L +L G+N     L+ +
Sbjct: 302 ------------------EKLHNLQILNLNNNELTALPKEIGQLQNLYGLNLKLNKLTIL 343

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P EI +   +  LDLS N +  LP E+     L +L LS N +  +P  I   L +L  L
Sbjct: 344 PKEIGQLQNMRDLDLSDNQLTTLPSEIGQLKKLHSLNLSGNSLTSFPKEI-GKLQNLKFL 402

Query: 272 KLDNNP 277
           +L   P
Sbjct: 403 RLRGIP 408



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 172/372 (46%), Gaps = 52/372 (13%)

Query: 81  LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS-NNSLSGLPPEIGKMTT 138
           L+  P  + K   L  LDL  N  K    E  +L+ L  L+LS NN+   LP EIG++  
Sbjct: 63  LTTFPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNLQELNLSFNNNPIDLPQEIGRLQN 122

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 198
           L +L L+GN L TL         P  +  L++     E + +S    DL     RL    
Sbjct: 123 LERLNLSGNRLTTL---------PQEIWRLQNL---QELNLSSNYLIDLPQEIGRLQ-NL 169

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L+L G  L+ +P EI +  ++  L ++ N +  LP E+    +L+ L+L  N +   P
Sbjct: 170 EQLNLSGNRLTTLPQEIGQLKKLEWLHVNHNRLTVLPKEIGQLQNLKELLLYDNSLTTLP 229

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
           + I   L     L L  N L  +P  G   +  L+ + L  N + SLP+      L +LQ
Sbjct: 230 EEI-GQLQKFKQLVLHENQLTTLPQ-GLCKLQNLERIYLHQNRLTSLPQE--IGQLQNLQ 285

Query: 318 ELYLRRMQLREAPTDILR-----------------------LQQLRILDLSQNSLQSIPE 354
           EL+L   QL+  P +I +                       LQ L  L+L  N L  +P+
Sbjct: 286 ELHLSSNQLKTLPKEIEKLHNLQILNLNNNELTALPKEIGQLQNLYGLNLKLNKLTILPK 345

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKY 414
               L ++ +LDLSDN ++ LP E+G L+  L +L L GN L S  + I   G    LK+
Sbjct: 346 EIGQLQNMRDLDLSDNQLTTLPSEIGQLK-KLHSLNLSGNSLTSFPKEI---GKLQNLKF 401

Query: 415 LK-----DKIPE 421
           L+     D IP+
Sbjct: 402 LRLRGIPDLIPQ 413



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 151/364 (41%), Gaps = 79/364 (21%)

Query: 68  CCSLAEF------YMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVL 119
            C L EF      Y+     + L   L   + +  L+L    L  +   +E  Q  L  L
Sbjct: 21  VCFLTEFRAEESYYIEEGIYTDLNEALKNPTDVRVLNLSYRYLTTFPKGIEKFQ-NLKHL 79

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DLS N    LP EIG++  L++L L+ N          N P                   
Sbjct: 80  DLSENFFKTLPQEIGRLQNLQELNLSFN----------NNPI------------------ 111

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                 DL     RL    + L+L G  L+ +P EIW    + +L+LS N + +LP E+ 
Sbjct: 112 ------DLPQEIGRLQNLER-LNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEIG 164

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD--L 297
              +L+ L LS N++   P  I   L  L  L +++N L  +P    K+I  LQ L   L
Sbjct: 165 RLQNLEQLNLSGNRLTTLPQEI-GQLKKLEWLHVNHNRLTVLP----KEIGQLQNLKELL 219

Query: 298 SYN--IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
            Y+  + +LPE      L   ++L L   QL   P  + +LQ L  + L QN L S+P+ 
Sbjct: 220 LYDNSLTTLPEE--IGQLQKFKQLVLHENQLTTLPQGLCKLQNLERIYLHQNRLTSLPQE 277

Query: 356 FKNLTSLTELDLSDNNI-----------------------SALPPELGLLEPSLQALRLD 392
              L +L EL LS N +                       +ALP E+G L+ +L  L L 
Sbjct: 278 IGQLQNLQELHLSSNQLKTLPKEIEKLHNLQILNLNNNELTALPKEIGQLQ-NLYGLNLK 336

Query: 393 GNPL 396
            N L
Sbjct: 337 LNKL 340



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 3/166 (1%)

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           L +   ++ L LS   +  +P  I     +L  L L  N  + +P +    +  LQ L+L
Sbjct: 47  LKNPTDVRVLNLSYRYLTTFPKGI-EKFQNLKHLDLSENFFKTLPQE-IGRLQNLQELNL 104

Query: 298 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
           S+N   +        L +L+ L L   +L   P +I RLQ L+ L+LS N L  +P+   
Sbjct: 105 SFNNNPIDLPQEIGRLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEIG 164

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            L +L +L+LS N ++ LP E+G L+  L+ L ++ N L  + + I
Sbjct: 165 RLQNLEQLNLSGNRLTTLPQEIGQLK-KLEWLHVNHNRLTVLPKEI 209


>gi|297681099|ref|XP_002818262.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Pongo abelii]
          Length = 861

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 182/385 (47%), Gaps = 23/385 (5%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           KN L  +P+T+ SL  L  L+L  N++   P ++     L    +  N +S+LP E+ +L
Sbjct: 267 KNKLRHIPDTLPSLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIKEL 326

Query: 92  SKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
             L TL L  N+L    VE  Q L++  L L++N L  +  +I     LR L+L  N L+
Sbjct: 327 KNLETLLLDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLK 386

Query: 151 TLRSSLVNGPTPALLKYLR------SRLPENEDS-----EASTTKEDLITMATRLSVTSK 199
           ++   +      A+L+ L       + LP+N        +    + +++ +   +S  + 
Sbjct: 387 SIPEKI---SCCAMLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVKITDSISHLNN 443

Query: 200 ELSLE--GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             SLE  G  ++ +P EI    +I K++LS N I   P  L +  SL  L +S N I + 
Sbjct: 444 ICSLEFSGNIITGVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVSGNCISEI 503

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHL 316
           P  I  S   L  L+L  N L  + S+ F  +  LQ LDL  N I  +P     S++  L
Sbjct: 504 PVDISFS-KQLLHLELSENKLL-IFSEHFCSLINLQYLDLGKNQIKKIP--ASISNMISL 559

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L L   +    P ++  L+ L++LDLS+N LQ I     NL  + +L+ S N     P
Sbjct: 560 HVLILCCNKFETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFP 619

Query: 377 PELGLLEPSLQALRLDGNPLRSIRR 401
            EL  L+ SL+ L +     R + R
Sbjct: 620 IELCQLQ-SLEQLNISQIKGRKLTR 643



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 173/376 (46%), Gaps = 20/376 (5%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
            S N ++ +P+ I  L  + +L  + N I + PS +    +L    +G N L  +P  L 
Sbjct: 219 VSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDTLP 278

Query: 90  KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
            L  L  L+L  NQL  +    C L +L  LDL+ N +S LP EI ++  L  LLL  N 
Sbjct: 279 SLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIKELKNLETLLLDHNK 338

Query: 149 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 208
           L  L   +       LLK    +L +N+    S   E+   +  R+ +  K L      L
Sbjct: 339 LTFLAVEIF-----QLLKIKELQLADNKLEVISHKIENFREL--RILILDKNL------L 385

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
            +IP +I     +  L LS N + ELP  +    +L+ L ++RN +    D+I + L+++
Sbjct: 386 KSIPEKISCCAMLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVKITDSI-SHLNNI 444

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 327
             L+   N +  VP +  K+   +  ++LSYN I   P      +L  L  L +    + 
Sbjct: 445 CSLEFSGNIITGVPIE-IKNCQKIIKIELSYNKIMYFP--LGLCALDSLYYLSVSGNCIS 501

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
           E P DI   +QL  L+LS+N L    E F +L +L  LDL  N I  +P  +  +  SL 
Sbjct: 502 EIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLQYLDLGKNQIKKIPASISNM-ISLH 560

Query: 388 ALRLDGNPLRSIRRTI 403
            L L  N   +  R +
Sbjct: 561 VLILCCNKFETFPREL 576



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 186/405 (45%), Gaps = 24/405 (5%)

Query: 6   VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
           ++ NKLT L+   I     + EL  + N L  +   I +   L  L L +N + SIP  I
Sbjct: 334 LDHNKLTFLAVE-IFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKSIPEKI 392

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 124
           S C  L    + +N L+ LP  + KL  L  L ++ N + +       L  +  L+ S N
Sbjct: 393 SCCAMLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVKITDSISHLNNICSLEFSGN 452

Query: 125 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 184
            ++G+P EI     + K+ L+ N +      L    +   L YL            S + 
Sbjct: 453 IITGVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDS---LYYL------------SVSG 497

Query: 185 EDLITMATRLSVTSKELSLE-GMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPELSSCA 242
             +  +   +S + + L LE   N   I SE + +   +  LDL +N I+++P  +S+  
Sbjct: 498 NCISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLQYLDLGKNQIKKIPASISNMI 557

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           SL  LIL  NK + +P  + T L +L  L L  N L+++ SD   ++  +Q L+ S N  
Sbjct: 558 SLHVLILCCNKFETFPRELCT-LENLQVLDLSENQLQKISSD-ICNLKGIQKLNFSSNQF 615

Query: 302 ASLP-ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
              P E     SL  L    ++  +L   P ++  + QL+ LD+S N+++ IP     L 
Sbjct: 616 IHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELR 675

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILD 405
           +L  L   +N IS LPP L  L   LQ L L GN L ++   I +
Sbjct: 676 NLVSLHAYNNQISYLPPSLLSLN-DLQQLNLSGNNLTALPSAIYN 719



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 168/359 (46%), Gaps = 26/359 (7%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+   ML  L  S N L  +P+ I  L  L +L +++N ++ I  SIS   ++       
Sbjct: 392 ISCCAMLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVKITDSISHLNNICSLEFSG 451

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++ +P E+    K+  ++L  N++  + +  C L  L  L +S N +S +P +I    
Sbjct: 452 NIITGVPIEIKNCQKIIKIELSYNKIMYFPLGLCALDSLYYLSVSGNCISEIPVDISFSK 511

Query: 138 TLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            L  L L+ N L        SL+N      L+YL   L +N+  +   +  ++I++   +
Sbjct: 512 QLLHLELSENKLLIFSEHFCSLIN------LQYL--DLGKNQIKKIPASISNMISLHVLI 563

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
              +K            P E+     +  LDLS N +Q++  ++ +   +Q L  S N+ 
Sbjct: 564 LCCNK--------FETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQF 615

Query: 255 KDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
             +P  +  L SL  L+  ++    L ++P +   ++  L+ LD+S N I  +P N    
Sbjct: 616 IHFPIELCQLQSLEQLNISQIKGRKLTRLPGE-LSNMTQLKELDISNNAIREIPRN--IG 672

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
            L +L  L+    Q+   P  +L L  L+ L+LS N+L ++P    NL SL E++  DN
Sbjct: 673 ELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSAIYNLFSLKEINFDDN 731



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 123/280 (43%), Gaps = 36/280 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L V GN ++ +  ++  S  +L  L  S+N L    E   SL  L  LDL +N+I  IP+
Sbjct: 493 LSVSGNCISEIPVDISFSKQLL-HLELSENKLLIFSEHFCSLINLQYLDLGKNQIKKIPA 551

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           SIS   SL    +  N     P EL  L  L  LDL  NQL++   + C L+ +  L+ S
Sbjct: 552 SISNMISLHVLILCCNKFETFPRELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFS 611

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N     P E+ ++ +L +L ++    R L                 +RLP         
Sbjct: 612 SNQFIHFPIELCQLQSLEQLNISQIKGRKL-----------------TRLPGE------- 647

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                ++  T+L    KEL +    +  IP  I E   +  L    N I  LPP L S  
Sbjct: 648 -----LSNMTQL----KELDISNNAIREIPRNIGELRNLVSLHAYNNQISYLPPSLLSLN 698

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
            LQ L LS N +   P AI  +L SL  +  D+NPL + P
Sbjct: 699 DLQQLNLSGNNLTALPSAIY-NLFSLKEINFDDNPLLRPP 737



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 111/225 (49%), Gaps = 25/225 (11%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L++   ++S IP EI + G I +L    N I+  P +L    +L+ L L +NK++  PD 
Sbjct: 217 LNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDT 276

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPP---------- 309
            L SL +L  L L+ N L   P      +P L  LDL+ N I+SLP+             
Sbjct: 277 -LPSLKNLRVLNLEYNQLTIFPK-ALCFLPKLISLDLTGNLISSLPKEIKELKNLETLLL 334

Query: 310 ------FSSLPHLQELYLRRMQLREAPTDIL-----RLQQLRILDLSQNSLQSIPEGFKN 358
                 F ++   Q L ++ +QL +   +++       ++LRIL L +N L+SIPE    
Sbjct: 335 DHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLKSIPEKISC 394

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L  L LSDN ++ LP  +  L+ +L+ L ++ N +  I  +I
Sbjct: 395 CAMLECLSLSDNKLTELPKNIHKLK-NLRKLHVNRNNMVKITDSI 438



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 24/195 (12%)

Query: 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS 283
           ++L    +QE P ++     ++ L L +N+IK +  A    L  L  L L  N L  +PS
Sbjct: 147 VNLEAKGLQEFPRDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLSSLPS 206

Query: 284 DGFKDIPMLQILDLSYN-IASLP-------------------ENPP--FSSLPHLQELYL 321
           +  + +  L+IL++S+N I+ +P                   EN P     L +L+ L L
Sbjct: 207 E-IQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSL 265

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGL 381
            + +LR  P  +  L+ LR+L+L  N L   P+    L  L  LDL+ N IS+LP E+  
Sbjct: 266 GKNKLRHIPDTLPSLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIKE 325

Query: 382 LEPSLQALRLDGNPL 396
           L+ +L+ L LD N L
Sbjct: 326 LK-NLETLLLDHNKL 339


>gi|351698990|gb|EHB01909.1| Leucine-rich repeat and IQ domain-containing protein 4
           [Heterocephalus glaber]
          Length = 486

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 187/442 (42%), Gaps = 63/442 (14%)

Query: 18  LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           L+A  T  T+  AS   L   P  I +L  L  + L  N I  IP  I    S+   Y+ 
Sbjct: 6   LVADRTFFTD--ASNQSLTAFPLEILALKELEEVYLENNHIKEIPQDIQHLRSIRILYLD 63

Query: 78  NNALSALPAELGKLSKLGTLDLHSN-----------------QLKEYCVEACQL------ 114
            N L  L  ELG LS L  LDL  N                 +L+ Y V+  ++      
Sbjct: 64  KNNLKGLCPELGALSNLEGLDLSGNPLAPSSLQVLSSLSALRELRLYHVDLGEIPVVICK 123

Query: 115 ---RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 171
               L +L LS N L  LP EI     LR++ L  N  +     L       ++      
Sbjct: 124 NLHHLELLGLSGNRLESLPKEIVNQIKLREIHLKQNQFKLFPQELCVLHNLEIID----- 178

Query: 172 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 231
           L EN+ S       DL  +        ++  +   NL ++P  + +  ++T LDLS N +
Sbjct: 179 LDENKLSALPEEIGDLRRL--------QKFYVAHNNLPSLPKSLCQCSKMTVLDLSHNLL 230

Query: 232 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 291
           + +P  L     +  + LS N+++  P  +  S  SL  L L N  LR + S  F+ +  
Sbjct: 231 ECMPCTLGELTEMTEIGLSGNRLEKVP-CLFCSWPSLHLLYLHNTGLRGLRS-SFQQLLN 288

Query: 292 LQILDLSYN----------------IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
           L+ L+LS N                I +L +N    S   L+ELY+ +  L   P  +  
Sbjct: 289 LRFLNLSQNHLAHVPSQICALKNLEILALDDNKIRQS---LKELYIEKNCLEYLPVSLGS 345

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           + +L +LD   N L+ +P+       L EL L DN ++ LP +L  LE +L+ L L  NP
Sbjct: 346 VPKLEVLDCRHNLLKQLPDEICQAQGLRELLLEDNLLTHLPEDLDSLE-NLKVLTLVNNP 404

Query: 396 LRSIRRTILDRGTKAVLKYLKD 417
           +      +   G +A+  YLK+
Sbjct: 405 MEYPPVEVCAEGNEAIWTYLKE 426



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 130/286 (45%), Gaps = 10/286 (3%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN+L  L    I +   L E+   +N     P+ +  L  L  +DL +N++ ++P 
Sbjct: 131 LGLSGNRLESLPKE-IVNQIKLREIHLKQNQFKLFPQELCVLHNLEIIDLDENKLSALPE 189

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVL 119
            I     L +FY+ +N L +LP  L + SK+  LDL  N L+  C+  C L     ++ +
Sbjct: 190 EIGDLRRLQKFYVAHNNLPSLPKSLCQCSKMTVLDLSHNLLE--CM-PCTLGELTEMTEI 246

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LS N L  +P       +L  L L    LR LRSS         L   ++ L       
Sbjct: 247 GLSGNRLEKVPCLFCSWPSLHLLYLHNTGLRGLRSSFQQLLNLRFLNLSQNHLAHVPSQI 306

Query: 180 ASTTKEDLITM-ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
            +    +++ +   ++  + KEL +E   L  +P  +    ++  LD   N +++LP E+
Sbjct: 307 CALKNLEILALDDNKIRQSLKELYIEKNCLEYLPVSLGSVPKLEVLDCRHNLLKQLPDEI 366

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
                L+ L+L  N +   P+  L SL +L  L L NNP+   P +
Sbjct: 367 CQAQGLRELLLEDNLLTHLPED-LDSLENLKVLTLVNNPMEYPPVE 411


>gi|299470286|emb|CBN79590.1| LRR-GTPase of the ROCO family [Ectocarpus siliculosus]
          Length = 1527

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 145/504 (28%), Positives = 220/504 (43%), Gaps = 94/504 (18%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 59
           + +L +E N+LT      + +   L  L  S N L G +P   G+LS L  L+L + ++ 
Sbjct: 95  LEQLWLERNQLTGPIPREVGNLRELKALWLSGNRLTGAIPAQHGALSELSCLNLSKTQLS 154

Query: 60  S-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQL--- 114
             I   +     L   ++ +N L+  +P ELGKL+ L +LDL  NQL        QL   
Sbjct: 155 GPILKELGALTKLTSLFLRSNKLTGPIPPELGKLAALESLDLTGNQLTGAI--PAQLGDL 212

Query: 115 -RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP----ALLKYL 168
            +L+ L+LSNN LSG +PPE+GK+  +++L L GN L        +GP P    AL K  
Sbjct: 213 NKLTALNLSNNQLSGPIPPEVGKLGAVKQLDLWGNKL--------SGPIPKELGALTKLA 264

Query: 169 RSRLPENEDSEASTTKEDLITMATRLSVTSKELS-----------------LEGMNLS-A 210
              L  N+ ++    +   ++    L + + +LS                 L G  L+ A
Sbjct: 265 SLFLRSNKFTDPIPPEMGNLSALQHLELQNNQLSGPIPSEVGNLRELKTLWLSGNQLTGA 324

Query: 211 IPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
           IP+++    E+T L+LS+N +  E+P  L   + L +L L +NK+  +    L SLS L 
Sbjct: 325 IPAQLGALNELTCLNLSKNQLSGEIPASLGQVSKLDSLYLHQNKLSGYIPKELGSLSKLG 384

Query: 270 CLKLDNNPLR-------------------------QVPSDGFKDIPMLQILDLSYNIASL 304
            L+L+NN L                           +P+     +  L  L LS N  S 
Sbjct: 385 VLRLNNNDLTGPIPNELGALTKLTSLFLVCNKLTGAIPAQ-LAALKELTRLLLSGNQLSG 443

Query: 305 PENPPFSSLPHLQELYLRRMQLRE-APTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSL 362
           P  P    LP L  L LR  +L    P ++  L  L++L LS+N L   IP    NL +L
Sbjct: 444 PIPPGLGKLPSLTCLNLRENELNGPIPHELGGLTDLKVLGLSKNKLTGPIPPELGNLGAL 503

Query: 363 TELDLSDNNISAL-----------------------PPELGLLEPSLQALRLD--GNPLR 397
             LDL  N ++ L                       P EL  L  +L     D  GNP  
Sbjct: 504 KTLDLGTNELTGLWDHTCNAEDVGQERAKRMSGGTIPSELRRLLETLDGADTDLGGNPWA 563

Query: 398 SIRRTILDRGTKAVLKYLKDKIPE 421
               +I+ +G +++  Y +D   E
Sbjct: 564 EPPESIVTKGMESIRGYFEDLYAE 587



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 178/370 (48%), Gaps = 33/370 (8%)

Query: 29  IASKNLLNGMPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALSA-LPA 86
           + S NL   +P  +G+LS L  LDL  N++   IP  +     L + ++  N L+  +P 
Sbjct: 52  LKSNNLRGPIPPQLGNLSFLESLDLGINKLGGHIPKELGALTILEQLWLERNQLTGPIPR 111

Query: 87  ELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLL 143
           E+G L +L  L L  N+L             LS L+LS   LSG +  E+G +T L  L 
Sbjct: 112 EVGNLRELKALWLSGNRLTGAIPAQHGALSELSCLNLSKTQLSGPILKELGALTKLTSLF 171

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSK 199
                   LRS+ + GP P  L  L +     L  N+ + A   +   +   T L++++ 
Sbjct: 172 --------LRSNKLTGPIPPELGKLAALESLDLTGNQLTGAIPAQLGDLNKLTALNLSNN 223

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE-LPPELSSCASLQTLILSRNKIKDWP 258
           +LS        IP E+ + G + +LDL  N +   +P EL +   L +L L  NK  D  
Sbjct: 224 QLS------GPIPPEVGKLGAVKQLDLWGNKLSGPIPKELGALTKLASLFLRSNKFTDPI 277

Query: 259 DAILTSLSSLSCLKLDNNPLRQ-VPSDGFKDIPMLQILDLSYN--IASLPENPPFSSLPH 315
              + +LS+L  L+L NN L   +PS+   ++  L+ L LS N    ++P      +L  
Sbjct: 278 PPEMGNLSALQHLELQNNQLSGPIPSE-VGNLRELKTLWLSGNQLTGAIPAQ--LGALNE 334

Query: 316 LQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNIS 373
           L  L L + QL  E P  + ++ +L  L L QN L   IP+   +L+ L  L L++N+++
Sbjct: 335 LTCLNLSKNQLSGEIPASLGQVSKLDSLYLHQNKLSGYIPKELGSLSKLGVLRLNNNDLT 394

Query: 374 A-LPPELGLL 382
             +P ELG L
Sbjct: 395 GPIPNELGAL 404



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 29/208 (13%)

Query: 217 EAGEITKLDLSRNSIQE-LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
           + G + KL L  N+++  +PP+L + + L++L L  NK+       L +L+ L  L L+ 
Sbjct: 43  DEGRVVKLRLKSNNLRGPIPPQLGNLSFLESLDLGINKLGGHIPKELGALTILEQLWLER 102

Query: 276 NPL-----RQVPS---------DGFK---DIPM-------LQILDLSYNIASLPENPPFS 311
           N L     R+V +          G +    IP        L  L+LS    S P      
Sbjct: 103 NQLTGPIPREVGNLRELKALWLSGNRLTGAIPAQHGALSELSCLNLSKTQLSGPILKELG 162

Query: 312 SLPHLQELYLRRMQLRE-APTDILRLQQLRILDLSQNSL-QSIPEGFKNLTSLTELDLSD 369
           +L  L  L+LR  +L    P ++ +L  L  LDL+ N L  +IP    +L  LT L+LS+
Sbjct: 163 ALTKLTSLFLRSNKLTGPIPPELGKLAALESLDLTGNQLTGAIPAQLGDLNKLTALNLSN 222

Query: 370 NNISA-LPPELGLLEPSLQALRLDGNPL 396
           N +S  +PPE+G L  +++ L L GN L
Sbjct: 223 NQLSGPIPPEVGKL-GAVKQLDLWGNKL 249


>gi|47222121|emb|CAG11547.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1279

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 174/380 (45%), Gaps = 44/380 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N L+ L    IAS   L EL  SKN +   P+ I     L  ++   N I  
Sbjct: 105 LKKLSMPDNDLSNLPTT-IASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITK 163

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P   +   +L + ++ +  L  LPA  G+LSKL  L+L  N LK       +L +L  L
Sbjct: 164 LPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERL 223

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL +N  S +P  + ++ +L++L L  N L+++      G     +    SR+       
Sbjct: 224 DLGSNEFSDVPEVLEQIHSLKELWLDNNSLQSIPGVRTGGTKTLSMTPCYSRV------- 276

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW--EAGEITKLDLSRNSIQELPPE 237
                                       +  +P + +  +  ++  LDL++N I+ L  +
Sbjct: 277 ----------------------------IPYVPPQQFLGKLRQLRYLDLAKNRIETLDTD 308

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           +S C +L+ L+LS N ++  PD+I   L  L+ LK+D+N L  +P +    + +++ LD 
Sbjct: 309 ISGCEALEDLLLSSNMLQHLPDSI-GMLKKLTTLKVDDNQLTSLP-NTIGSLSLMEELDC 366

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
           S N + SLP  P    L  L+        L E P +I   + + ++ L  N L+ +PE  
Sbjct: 367 SCNELESLP--PTIGYLHSLRTFAADENFLTELPREIGNCKNVTVMSLRSNKLEFLPEEI 424

Query: 357 KNLTSLTELDLSDNNISALP 376
             +T L  L+LSDN +  LP
Sbjct: 425 GQMTKLRVLNLSDNRLKNLP 444



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 164/374 (43%), Gaps = 45/374 (12%)

Query: 35  LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 93
           L  +P+ I S  R L  L L  N+I  +P  +  C +L +  M +N LS LP  +  L  
Sbjct: 68  LQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVN 127

Query: 94  LGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
           L  LD+  N ++E+   ++ C+  LSV++ S N ++ LP    ++  L +L L       
Sbjct: 128 LKELDISKNGIQEFPDNIKCCK-GLSVVEASVNPITKLPDGFTQLLNLTQLFLND----- 181

Query: 152 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211
                      A L+YL    P N                ++L +    L L   +L  +
Sbjct: 182 -----------AFLEYL----PAN------------FGRLSKLRI----LELRENHLKTM 210

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCL 271
           P  I    ++ +LDL  N   ++P  L    SL+ L L  N ++  P        +LS  
Sbjct: 211 PKSIHRLTQLERLDLGSNEFSDVPEVLEQIHSLKELWLDNNSLQSIPGVRTGGTKTLSMT 270

Query: 272 KLDNNPLRQVPSDGF-KDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREA 329
              +  +  VP   F   +  L+ LDL+ N I +L  +   S    L++L L    L+  
Sbjct: 271 PCYSRVIPYVPPQQFLGKLRQLRYLDLAKNRIETLDTD--ISGCEALEDLLLSSNMLQHL 328

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
           P  I  L++L  L +  N L S+P    +L+ + ELD S N + +LPP +G L  SL+  
Sbjct: 329 PDSIGMLKKLTTLKVDDNQLTSLPNTIGSLSLMEELDCSCNELESLPPTIGYLH-SLRTF 387

Query: 390 RLDGNPLRSIRRTI 403
             D N L  + R I
Sbjct: 388 AADENFLTELPREI 401



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 107/201 (53%), Gaps = 7/201 (3%)

Query: 201 LSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           L     +L  +P EI+     + +L L  N I+ELP +L +C +L+ L +  N + + P 
Sbjct: 61  LDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPT 120

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 318
            I  SL +L  L +  N +++ P D  K    L +++ S N I  LP+   F+ L +L +
Sbjct: 121 TI-ASLVNLKELDISKNGIQEFP-DNIKCCKGLSVVEASVNPITKLPDG--FTQLLNLTQ 176

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L+L    L   P +  RL +LRIL+L +N L+++P+    LT L  LDL  N  S +P  
Sbjct: 177 LFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSDVPEV 236

Query: 379 LGLLEPSLQALRLDGNPLRSI 399
           L  +  SL+ L LD N L+SI
Sbjct: 237 LEQIH-SLKELWLDNNSLQSI 256



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 111/270 (41%), Gaps = 63/270 (23%)

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           C    +  +SVLD S+ SL  +P EI     TL +L L  N +  L   L N    AL  
Sbjct: 50  CFRGEEEVISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFN--CQAL-- 105

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                                           K+LS+   +LS +P+ I     + +LD+
Sbjct: 106 --------------------------------KKLSMPDNDLSNLPTTIASLVNLKELDI 133

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S+N IQE P  +  C  L  +  S N I   PD   T L +L+ L L+         D F
Sbjct: 134 SKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDG-FTQLLNLTQLFLN---------DAF 183

Query: 287 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
                     L Y    LP N  F  L  L+ L LR   L+  P  I RL QL  LDL  
Sbjct: 184 ----------LEY----LPAN--FGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGS 227

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           N    +PE  + + SL EL L +N++ ++P
Sbjct: 228 NEFSDVPEVLEQIHSLKELWLDNNSLQSIP 257



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 92/217 (42%), Gaps = 37/217 (17%)

Query: 40  ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 99
           + +G L +L  LDL +NRI ++ + ISGC +L +  + +N L  LP  +G L KL TL +
Sbjct: 284 QFLGKLRQLRYLDLAKNRIETLDTDISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKV 343

Query: 100 HSNQLKEYCVEACQLRL-SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
             NQL         L L   LD S N L  LPP IG + +LR      N L  L   + N
Sbjct: 344 DDNQLTSLPNTIGSLSLMEELDCSCNELESLPPTIGYLHSLRTFAADENFLTELPREIGN 403

Query: 159 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 218
                                              ++V    +SL    L  +P EI + 
Sbjct: 404 --------------------------------CKNVTV----MSLRSNKLEFLPEEIGQM 427

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
            ++  L+LS N ++ LP   +    L  L LS N+ K
Sbjct: 428 TKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDNQSK 464



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L V+ N+LT L N  I S +++ EL  S N L  +P TIG L  L      +N +  
Sbjct: 338 LTTLKVDDNQLTSLPNT-IGSLSLMEELDCSCNELESLPPTIGYLHSLRTFAADENFLTE 396

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I  C ++    + +N L  LP E+G+++KL  L+L  N+LK       +L+ L+ L
Sbjct: 397 LPREIGNCKNVTVMSLRSNKLEFLPEEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAAL 456

Query: 120 DLSNNSLSGLPP 131
            LS+N    L P
Sbjct: 457 WLSDNQSKALIP 468



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 279 RQVPSDGFK-DIPMLQILDLSYNIASLPENPP--FSSLPHLQELYLRRMQLREAPTDILR 335
           R VP   F+ +  ++ +LD S+   SL + P   FS    L+ELYL   Q+ E P  +  
Sbjct: 44  RLVPCRCFRGEEEVISVLDYSH--CSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFN 101

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
            Q L+ L +  N L ++P    +L +L ELD+S N I   P
Sbjct: 102 CQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEFP 142


>gi|348578535|ref|XP_003475038.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1-like [Cavia porcellus]
          Length = 871

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 178/384 (46%), Gaps = 30/384 (7%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           + S   L  L  SKN L  +P+ + +L  L  LD+  N++   P ++     L    +  
Sbjct: 266 VGSLRNLEILNVSKNKLRHIPDGLPNLQNLRILDMEYNKLTIFPKALCFLPKLISLNLVG 325

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N + +LP E+ +L  L  L L  N+L    VE  QL ++  L L++N L  + P+I    
Sbjct: 326 NMIGSLPKEIRELKNLEILLLDHNKLTFLAVEIFQLSKIKELKLADNKLEVISPKIENFK 385

Query: 138 TLRKLLLTGNPLRTL----------------RSSLVNGPTPAL-LKYLRSRLPENEDSEA 180
            LR L+L  N L+ +                 + L++ P     LK LR +L  N +S  
Sbjct: 386 ELRILILDKNLLKNIPERISYCVMLECLSLSDNKLIDLPKNIYKLKNLR-KLHVNRNSIV 444

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
             T ED+  +    S     L   G  +  +P EI    ++TK++L+ N I + P  L +
Sbjct: 445 GIT-EDISHLTNICS-----LEFSGNMIKNVPIEIKNCRKLTKVELNYNKILQFPVGLCA 498

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             SL  L  + N I   P  +  S   L  L+L+ N L  V +D    +  L+ L+L  N
Sbjct: 499 LDSLYYLSFNGNSISQIPADVSFS-KQLLHLELNENKLL-VFADHLCSLMNLKFLNLGKN 556

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            I  +P  P  S++  L  L L   +    P ++  L+ L++LDLS+N LQ+IP   +NL
Sbjct: 557 QIEKIP--PSISNMISLHVLILCSNKFEIFPKELCTLENLQVLDLSENQLQTIPSEIRNL 614

Query: 360 TSLTELDLSDNNISALPPELGLLE 383
             + +L+ S N  +  P EL  L+
Sbjct: 615 KGVQKLNFSSNQFTRFPTELCQLQ 638



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 190/424 (44%), Gaps = 70/424 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  NKL V+S   I ++  L  LI  KNLL  +PE I     L  L L  N+++ 
Sbjct: 364 IKELKLADNKLEVISPK-IENFKELRILILDKNLLKNIPERISYCVMLECLSLSDNKLID 422

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P +I    +L + ++  N++  +  ++  L+ + +L+   N +K   +E    R L+ +
Sbjct: 423 LPKNIYKLKNLRKLHVNRNSIVGITEDISHLTNICSLEFSGNMIKNVPIEIKNCRKLTKV 482

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +L+ N +   P  +  + +L  L   GN +                    S++P    ++
Sbjct: 483 ELNYNKILQFPVGLCALDSLYYLSFNGNSI--------------------SQIP----AD 518

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            S +K+ L             L L    L      +     +  L+L +N I+++PP +S
Sbjct: 519 VSFSKQLL------------HLELNENKLLVFADHLCSLMNLKFLNLGKNQIEKIPPSIS 566

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  SL  LIL  NK + +P  + T L +L  L L  N L+ +PS+  +++  +Q L+ S 
Sbjct: 567 NMISLHVLILCSNKFEIFPKELCT-LENLQVLDLSENQLQTIPSE-IRNLKGVQKLNFSS 624

Query: 300 N---------------------------IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
           N                           +  LPE    S++  L++L +    +RE PT+
Sbjct: 625 NQFTRFPTELCQLQSLEELDISQANGTKLTRLPE--ELSNMTQLKKLDISNNAIREIPTN 682

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLD 392
           I  L+ L       N +  +P  F  L  L +L+LS NN++ALP  +  L  SL+ ++ D
Sbjct: 683 IGELRSLVSFYACNNQISYLPPSFLTLKELQQLNLSGNNLTALPSAIHNL-VSLKEIKFD 741

Query: 393 GNPL 396
            NPL
Sbjct: 742 DNPL 745



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 5/204 (2%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           +S++   LS++P EI     +  LD+S N I  +P E+    +++ L L+ N I+++P  
Sbjct: 205 ISMQDNELSSLPHEILLLNNLRILDVSHNQISHMPKEILHHENIRQLFLNDNYIENFPSP 264

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
            + SL +L  L +  N LR +P DG  ++  L+ILD+ YN +   P+   F  LP L  L
Sbjct: 265 GVGSLRNLEILNVSKNKLRHIP-DGLPNLQNLRILDMEYNKLTIFPKALCF--LPKLISL 321

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            L    +   P +I  L+ L IL L  N L  +      L+ + EL L+DN +  + P++
Sbjct: 322 NLVGNMIGSLPKEIRELKNLEILLLDHNKLTFLAVEIFQLSKIKELKLADNKLEVISPKI 381

Query: 380 GLLEPSLQALRLDGNPLRSIRRTI 403
              +  L+ L LD N L++I   I
Sbjct: 382 ENFK-ELRILILDKNLLKNIPERI 404



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 157/339 (46%), Gaps = 19/339 (5%)

Query: 75  YMGNNALSALPA-ELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL-DLSNNSLSGLPPE 132
           Y+ NN + +    +L  L  L  + +  N+L     E   L    + D+S+N +S +P E
Sbjct: 182 YLDNNKIKSFQGVDLDDLLGLEIISMQDNELSSLPHEILLLNNLRILDVSHNQISHMPKE 241

Query: 133 IGKMTTLRKLLLTGNPLR--------TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 184
           I     +R+L L  N +         +LR+  +   +   L+++   LP  ++      +
Sbjct: 242 ILHHENIRQLFLNDNYIENFPSPGVGSLRNLEILNVSKNKLRHIPDGLPNLQNLRILDME 301

Query: 185 EDLITMATR-LSVTSKELSLE--GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
            + +T+  + L    K +SL   G  + ++P EI E   +  L L  N +  L  E+   
Sbjct: 302 YNKLTIFPKALCFLPKLISLNLVGNMIGSLPKEIRELKNLEILLLDHNKLTFLAVEIFQL 361

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN- 300
           + ++ L L+ NK++     I  +   L  L LD N L+ +P +      ML+ L LS N 
Sbjct: 362 SKIKELKLADNKLEVISPKI-ENFKELRILILDKNLLKNIP-ERISYCVMLECLSLSDNK 419

Query: 301 IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLT 360
           +  LP+N     L +L++L++ R  +     DI  L  +  L+ S N ++++P   KN  
Sbjct: 420 LIDLPKN--IYKLKNLRKLHVNRNSIVGITEDISHLTNICSLEFSGNMIKNVPIEIKNCR 477

Query: 361 SLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            LT+++L+ N I   P  L  L+ SL  L  +GN +  I
Sbjct: 478 KLTKVELNYNKILQFPVGLCALD-SLYYLSFNGNSISQI 515



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 122/266 (45%), Gaps = 18/266 (6%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++  NKL V +++L  S   L  L   KN +  +P +I ++  L  L L  N+    P 
Sbjct: 528 LELNENKLLVFADHL-CSLMNLKFLNLGKNQIEKIPPSISNMISLHVLILCSNKFEIFPK 586

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +    +L    +  N L  +P+E+  L  +  L+  SNQ   +  E CQL+ L  LD+S
Sbjct: 587 ELCTLENLQVLDLSENQLQTIPSEIRNLKGVQKLNFSSNQFTRFPTELCQLQSLEELDIS 646

Query: 123 N---NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
                 L+ LP E+  MT L+KL ++ N +R + +++  G   +L+ +         +++
Sbjct: 647 QANGTKLTRLPEELSNMTQLKKLDISNNAIREIPTNI--GELRSLVSFYAC------NNQ 698

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            S      +T+        ++L+L G NL+A+PS I     + ++    N +   P E+ 
Sbjct: 699 ISYLPPSFLTLKEL-----QQLNLSGNNLTALPSAIHNLVSLKEIKFDDNPLLRPPMEIC 753

Query: 240 SCASLQTLILSRNKIKDWPDAILTSL 265
               L T+     +  +  + IL  +
Sbjct: 754 EGKQLYTITCYLQRADERDEKILEKM 779


>gi|296491199|tpg|DAA33272.1| TPA: leucine-rich repeats and IQ motif containing 4 [Bos taurus]
          Length = 506

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 186/422 (44%), Gaps = 49/422 (11%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
           AS   L  +PE I +L  L  + L  N I  IP  I     +   Y+  N L  L  E+G
Sbjct: 32  ASNQSLLTIPEDILALRELEEVHLENNLIAEIPKDIQHLRKIRVLYLNKNKLKNLCPEMG 91

Query: 90  KLSKLGTLDLHSNQLKEYCVEACQL-------RLSVLDLSNNSLSGLPPEIGK-MTTLRK 141
           +LS L  LDL  N L     EA  L       +L  L L    L+ +P  I K +  L  
Sbjct: 92  RLSNLEGLDLSDNPL-----EASSLPVLSGIRQLRELRLYRTDLADIPVVICKLLHHLEL 146

Query: 142 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 201
           L L GN L++L   +VN       K     L  N+ +       DL  +   LS  + E+
Sbjct: 147 LGLAGNHLKSLPKEIVNQT-----KLREIHLKHNQFAAFPLELCDLYNLX--LSQMT-EV 198

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
            L G +L  IP  +     +  L L    ++ L        +LQ L LS+N ++  P  I
Sbjct: 199 GLSGNHLEKIPRLLCRWTSLFLLYLHNTGLRVLRRSFRRLVNLQFLDLSQNFLEHCPLQI 258

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLP--------------- 305
             SL +L  L LD+N + Q+PSD F  +  L+IL L+ N  +S P               
Sbjct: 259 -CSLKNLEVLALDDNKICQLPSD-FGSLSKLKILGLTGNQFSSFPKEILSLASLEKLYIG 316

Query: 306 --ENPPFSSLP-------HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
             E    + LP       +L+ELY+    L   P  +  +  L ILD   N ++ +P+  
Sbjct: 317 QDEGAKLTHLPECIKRLQNLKELYIENNHLEYLPVSLGSMPNLEILDCHCNLIKQLPDAI 376

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
               +L EL   DN I+ LP  L  L  +L+ L L GNP+     ++  +GT+AV +YL+
Sbjct: 377 CQAQALKELRFEDNLITYLPENLDSL-VNLEVLTLTGNPMEEPPMSVCAKGTEAVWEYLR 435

Query: 417 DK 418
           ++
Sbjct: 436 ER 437



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 104/248 (41%), Gaps = 24/248 (9%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M+++ + GN L  +   L+  WT L  L      L  +  +   L  L  LDL QN +  
Sbjct: 195 MTEVGLSGNHLEKIPR-LLCRWTSLFLLYLHNTGLRVLRRSFRRLVNLQFLDLSQNFLEH 253

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RL 116
            P  I    +L    + +N +  LP++ G LSKL  L L  NQ   +  E   L    +L
Sbjct: 254 CPLQICSLKNLEVLALDDNKICQLPSDFGSLSKLKILGLTGNQFSSFPKEILSLASLEKL 313

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 176
            +       L+ LP  I ++  L++L +  N L  L  SL + P   +L           
Sbjct: 314 YIGQDEGAKLTHLPECIKRLQNLKELYIENNHLEYLPVSLGSMPNLEIL----------- 362

Query: 177 DSEASTTKE--DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
           D   +  K+  D I  A  L    KEL  E   ++ +P  +     +  L L+ N ++E 
Sbjct: 363 DCHCNLIKQLPDAICQAQAL----KELRFEDNLITYLPENLDSLVNLEVLTLTGNPMEE- 417

Query: 235 PPELSSCA 242
            P +S CA
Sbjct: 418 -PPMSVCA 424


>gi|431907791|gb|ELK11398.1| Protein LAP2 [Pteropus alecto]
          Length = 1479

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 187/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 79  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 138

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 139 LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 198

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++  L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 199 YLNDAFLEFLPANFGRLIKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 253

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 254 VPEVLEQLSGL--------KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 305

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C +LQ L+LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 306 ACENLQDLLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMFLP-DSIGGLISIEELDCSF 363

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N + +LP +                     P   S  ++  L+L   +L   P ++  ++
Sbjct: 364 NEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDME 423

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 424 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 463



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++   L +L+ S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 287 LTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMF 345

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 346 LPDSIGGLISIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 405

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L +N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 406 FLHSNKLETLPEEMGDMEKLKVINLSDNRLKNLPFSFT 443



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 88  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 146

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 147 INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 192

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 193 LNLT--QLYLNDAFLEFLPANFGRLIKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 250

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 251 FTEVPE-VLEQLSGLKEFWMDGNRLTFIP--GFIGSLKQLTYLDVSKNNIEMVEEG-ISA 306

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             +LQ+L L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N +
Sbjct: 307 CENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMFLPDSIGGLISIEELDCSFNEV 366

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 367 EALPSSVGQLT-NIRTFAADHNYLQQL 392


>gi|167535455|ref|XP_001749401.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772029|gb|EDQ85686.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1299

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 206/453 (45%), Gaps = 69/453 (15%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP------------------------ 39
           L+++ N +T L   +  S   L EL  S+N LNG+P                        
Sbjct: 155 LNLQSNWMTQLPPGMFDSLQQLQELKLSQNNLNGLPPGVFERLQSLRHLDLSAACDNNLS 214

Query: 40  -ETIGSLSRLIRLDLHQNRI---------------LSIPSSISGCCS--------LAEFY 75
              +  L+ L+ LDL   R+               L++ S+ S   +        L    
Sbjct: 215 STALNGLAELLFLDLSFLRVSLDSAGFRGLFRLETLNMESTTSSFAAGAFDDLHQLQSLA 274

Query: 76  MGNNALSALPAEL-GKLSKLGTLDLHSNQL----KEYCVEACQLRLSVLDLSNNSLSGLP 130
           M NN L++LP+ L   + +L TLDL  N L    + +   ACQLR   L+ + N L+ LP
Sbjct: 275 MKNNDLTSLPSGLFDHVYQLQTLDLSENSLAALPEGFFDHACQLR--TLNFNANRLTSLP 332

Query: 131 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 190
             +G +    +L      ++  ++SL + PT       + ++ E  ++  +     +   
Sbjct: 333 --VGLLDCTGQL----QSIKLNQNSLTSLPTGLFAAASQLQVVELAENALTALPAGIFER 386

Query: 191 ATRLSVTSKELSLEGMNLSAIPSEIWE-AGEITKLDLSRNSIQELPPE-LSSCASLQTLI 248
           A++L    + L L    L+A+P+ +++ A ++ KL+L  N +  LP    S+   LQT+ 
Sbjct: 387 ASQL----QTLHLNKNGLAALPTSVFQDATQLRKLNLEENVLTTLPDGVFSTTLHLQTVT 442

Query: 249 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENP 308
           L+ N +   P  +  +   L  +KLDNN L  +P   F    +LQ L L+YN  +  E  
Sbjct: 443 LNNNHLTSIPAGLFANTGELQSIKLDNNRLTVLPDRTFGKSNLLQRLSLTYNRLTRIEAN 502

Query: 309 PFSSLPHLQELYLRRMQLREAPTDILR-LQQLRILDLSQNSLQSIPEG-FKNLTSLTELD 366
            + SL  LQ+L L    L   P  I   L QL+ L L+ N+L  +  G F ++  L  L+
Sbjct: 503 GWDSLSQLQQLDLAENCLSALPKGIFNSLSQLQSLVLANNALAGLAPGMFDHMRQLQRLN 562

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L+ N+++ LP  +    P+LQ LR+  NP+ ++
Sbjct: 563 LNGNSLTLLPSHVFAGTPNLQELRMTANPIGTL 595



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 184/400 (46%), Gaps = 26/400 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR-LDLHQNRIL 59
           +  L ++ N LT L + L      L  L  S+N L  +PE     +  +R L+ + NR+ 
Sbjct: 270 LQSLAMKNNDLTSLPSGLFDHVYQLQTLDLSENSLAALPEGFFDHACQLRTLNFNANRLT 329

Query: 60  SIPSSISGCCS-LAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKEYCVEACQL--R 115
           S+P  +  C   L    +  N+L++LP  L    S+L  ++L  N L        +   +
Sbjct: 330 SLPVGLLDCTGQLQSIKLNQNSLTSLPTGLFAAASQLQVVELAENALTALPAGIFERASQ 389

Query: 116 LSVLDLSNNSLSGLPPEIGK-MTTLRKLLLTGNPLRTL----RSSLVNGPTPALLKYLRS 170
           L  L L+ N L+ LP  + +  T LRKL L  N L TL     S+ ++  T  L     +
Sbjct: 390 LQTLHLNKNGLAALPTSVFQDATQLRKLNLEENVLTTLPDGVFSTTLHLQTVTLNNNHLT 449

Query: 171 RLPEN---EDSEASTTKED---LITMATRLSVTS---KELSLEGMNLSAIPSEIWEA-GE 220
            +P        E  + K D   L  +  R    S   + LSL    L+ I +  W++  +
Sbjct: 450 SIPAGLFANTGELQSIKLDNNRLTVLPDRTFGKSNLLQRLSLTYNRLTRIEANGWDSLSQ 509

Query: 221 ITKLDLSRNSIQELPPEL-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
           + +LDL+ N +  LP  + +S + LQ+L+L+ N +      +   +  L  L L+ N L 
Sbjct: 510 LQQLDLAENCLSALPKGIFNSLSQLQSLVLANNALAGLAPGMFDHMRQLQRLNLNGNSLT 569

Query: 280 QVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
            +PS  F   P LQ L ++ N I +LP++   ++L +L  L +   +L +   D+L +  
Sbjct: 570 LLPSHVFAGTPNLQELRMTANPIGTLPKD-WLTALTNLVSLDIANSRLTQLDLDLLHMPD 628

Query: 339 LRILDLSQNSL---QSIPEGFKNLTSLTELDLSDNNISAL 375
           L+ L + ++      ++   F +   L +LDL+   +S L
Sbjct: 629 LKGLRIGRDDCPTNYAVHLNFASAARLQQLDLTGATVSGL 668



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 52/212 (24%)

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           L++   LQ L L  N +   P  +  SL  L  LKL  N L  +P   F+ +  L+ LDL
Sbjct: 146 LNNLHQLQVLNLQSNWMTQLPPGMFDSLQQLQELKLSQNNLNGLPPGVFERLQSLRHLDL 205

Query: 298 SY----NIASLPEN------------------------------------------PPFS 311
           S     N++S   N                                            F 
Sbjct: 206 SAACDNNLSSTALNGLAELLFLDLSFLRVSLDSAGFRGLFRLETLNMESTTSSFAAGAFD 265

Query: 312 SLPHLQELYLRRMQLREAPTDIL-RLQQLRILDLSQNSLQSIPEG-FKNLTSLTELDLSD 369
            L  LQ L ++   L   P+ +   + QL+ LDLS+NSL ++PEG F +   L  L+ + 
Sbjct: 266 DLHQLQSLAMKNNDLTSLPSGLFDHVYQLQTLDLSENSLAALPEGFFDHACQLRTLNFNA 325

Query: 370 NNISALPPELGLLEPS--LQALRLDGNPLRSI 399
           N +++LP  +GLL+ +  LQ+++L+ N L S+
Sbjct: 326 NRLTSLP--VGLLDCTGQLQSIKLNQNSLTSL 355


>gi|344289124|ref|XP_003416295.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Loxodonta africana]
          Length = 560

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 176/413 (42%), Gaps = 60/413 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L + GN L  L    I + T L E+   +N     P+ +  L  L  +DL +N++ SIP 
Sbjct: 147 LGLSGNLLKSLPQE-IVNQTKLREIYLKQNKFEVFPQELCVLYNLEIIDLDENKLNSIPE 205

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I     L +FY+  N +  +P  L   SK                      LSVLD S+
Sbjct: 206 EIGNLTMLQKFYVAYNKVPFIPDSLYHCSK----------------------LSVLDFSH 243

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N L  +P  + ++T + ++ L+GN L  +   L+   T   L YLR+            T
Sbjct: 244 NLLYCIPHTLTELTEMTEIGLSGNQLEKV-PRLICKWTSLQLLYLRN------------T 290

Query: 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 243
               +  + R  V  + L L   +L   P ++     +  L L  N I++LPPE+ S + 
Sbjct: 291 GLRSLRRSFRRLVNLRFLDLSQNHLEHCPLQVCALKNLEILALDDNKIRQLPPEIGSLSK 350

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS 303
           L+ L L+ N+   +P+ I  SL+SL  L L                      D      +
Sbjct: 351 LKILGLTGNQFFSFPEEIF-SLASLERLYLGQ--------------------DQGVKFTT 389

Query: 304 LPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLT 363
           +PE    S L  L+EL++    L   P  +  L  L ILD   N L+ +P+      +L 
Sbjct: 390 VPEC--ISKLQRLKELHIENNHLEYLPESLGLLPNLEILDCCHNLLRQLPDAICKAQALK 447

Query: 364 ELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLK 416
           EL L DN ++ LP  L  L  ++ AL L  NP+      +   G +A+ +YLK
Sbjct: 448 ELLLEDNLLTHLPENLDSL-VNISALTLMENPMVEPPVEVCTEGIEAIWRYLK 499



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 165/381 (43%), Gaps = 30/381 (7%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S  +L   P+ I    R+  +D     + +IP  I     L E ++ NN ++ +P ++  
Sbjct: 12  SSKILRDNPQHITD--RIFFIDASNQSLTTIPPEILELKELEEVHLENNDIAVIPQDIQH 69

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL--SGLPPEIGKMTTLRKLLLTGN 147
           L  +  L L+ N+L+  C E  +L RL  LDLSNN L  S +P  I  + TLR+L L   
Sbjct: 70  LKNIRILYLNKNKLRNLCPELGKLARLKGLDLSNNPLLFSSIPV-ISHIRTLRELRLYKI 128

Query: 148 PLR----TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
            LR     +  SL +     L   L   LP+             I   T+L    +E+ L
Sbjct: 129 YLREFPIVICKSLHHLELLGLSGNLLKSLPQE------------IVNQTKL----REIYL 172

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +       P E+     +  +DL  N +  +P E+ +   LQ   ++ NK+   PD+ L 
Sbjct: 173 KQNKFEVFPQELCVLYNLEIIDLDENKLNSIPEEIGNLTMLQKFYVAYNKVPFIPDS-LY 231

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
             S LS L   +N L  +P    +   M +I      +  +P          LQ LYLR 
Sbjct: 232 HCSKLSVLDFSHNLLYCIPHTLTELTEMTEIGLSGNQLEKVPR--LICKWTSLQLLYLRN 289

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             LR       RL  LR LDLSQN L+  P     L +L  L L DN I  LPPE+G L 
Sbjct: 290 TGLRSLRRSFRRLVNLRFLDLSQNHLEHCPLQVCALKNLEILALDDNKIRQLPPEIGSLS 349

Query: 384 PSLQALRLDGNPLRSIRRTIL 404
             L+ L L GN   S    I 
Sbjct: 350 -KLKILGLTGNQFFSFPEEIF 369



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 138/285 (48%), Gaps = 13/285 (4%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + K  V  NK+  + ++L    + L+ L  S NLL  +P T+  L+ +  + L  N++  
Sbjct: 213 LQKFYVAYNKVPFIPDSLYHC-SKLSVLDFSHNLLYCIPHTLTELTEMTEIGLSGNQLEK 271

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    SL   Y+ N  L +L     +L  L  LDL  N L+   ++ C L+ L +L
Sbjct: 272 VPRLICKWTSLQLLYLRNTGLRSLRRSFRRLVNLRFLDLSQNHLEHCPLQVCALKNLEIL 331

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L +N +  LPPEIG ++ L+ L LTGN   +    +      +L    R  L +++  +
Sbjct: 332 ALDDNKIRQLPPEIGSLSKLKILGLTGNQFFSFPEEIF-----SLASLERLYLGQDQGVK 386

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            +T  E  I+   RL    KEL +E  +L  +P  +     +  LD   N +++LP  + 
Sbjct: 387 FTTVPE-CISKLQRL----KELHIENNHLEYLPESLGLLPNLEILDCCHNLLRQLPDAIC 441

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
              +L+ L+L  N +   P+  L SL ++S L L  NP+ + P +
Sbjct: 442 KAQALKELLLEDNLLTHLPEN-LDSLVNISALTLMENPMVEPPVE 485


>gi|428164826|gb|EKX33838.1| hypothetical protein GUITHDRAFT_81033, partial [Guillardia theta
           CCMP2712]
          Length = 417

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 184/390 (47%), Gaps = 25/390 (6%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           +   T L  L  S N +  +P  IG L+ L    +  N + ++P +I G  +L E  + N
Sbjct: 44  VQHMTWLKLLNFSNNKIGSLPLEIGKLNSLKTFIMSYNLLTTLPPTIGGMTALTELSVSN 103

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMT 137
           N ++ LP  LG ++ L  +++  N L ++ VE  +   L  L L  N LS +PPEI +++
Sbjct: 104 NQITRLPPILGVMTSLTEVNIQDNFLDQHPVEVVEHALLLQLKLELNRLSNIPPEISRLS 163

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR----SRLPENEDSEASTTKEDLITMATR 193
           TL  L  + N LRTL  S+       +L YL     +RLP  E    S T      M +R
Sbjct: 164 TLTFLNFSHNQLRTLPPSIGTLSNLTVL-YLNDNKLTRLPI-ELGHLSPT------MLSR 215

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L         +  +++ IP ++     +T+L L  N+I  L   +     L+ L +  N 
Sbjct: 216 L---------DNNDITIIPVQVGNLTSLTELWLEGNNIMFLSSSIGKMQDLKVLHMHNNG 266

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSL 313
           +   P  I  +L +L  L++  N ++ +P+D  K    L+ L L +N+ S        SL
Sbjct: 267 LLYLPAEI-GNLQTLIELRIPFNEIKVLPAD-IKHCFNLRKLSLQHNLLSTVSADVLQSL 324

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
            +L+ L + R Q+   P  +  L  L+ L + QN ++S+P      +SLT L ++ N  S
Sbjct: 325 TNLESLNISRNQIVYVPGTVGCLHALQKLRMDQNQVRSLPSEIGGCSSLTLLSITCNQFS 384

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           +LP EL      L AL + GN    + R I
Sbjct: 385 SLPDELSSCS-LLTALHISGNRFFQLPRCI 413



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 162/377 (42%), Gaps = 63/377 (16%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L V  N++T L   ++   T LTE+    N L+  P  +   + L++L L  NR+ +
Sbjct: 96  LTELSVSNNQITRLPP-ILGVMTSLTEVNIQDNFLDQHPVEVVEHALLLQLKLELNRLSN 154

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IP  IS   +L      +N L  LP  +G LS L  L L+ N+L    +E   L  ++L 
Sbjct: 155 IPPEISRLSTLTFLNFSHNQLRTLPPSIGTLSNLTVLYLNDNKLTRLPIELGHLSPTMLS 214

Query: 121 -LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L NN ++ +P ++G +T+L +L L GN +  L SS+                       
Sbjct: 215 RLDNNDITIIPVQVGNLTSLTELWLEGNNIMFLSSSI----------------------- 251

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                +DL           K L +    L  +P+EI     + +L +  N I+ LP ++ 
Sbjct: 252 --GKMQDL-----------KVLHMHNNGLLYLPAEIGNLQTLIELRIPFNEIKVLPADIK 298

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C +L+ L L  N +      +L SL++L  L +  N +  VP                 
Sbjct: 299 HCFNLRKLSLQHNLLSTVSADVLQSLTNLESLNISRNQIVYVPGT--------------- 343

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
                        L  LQ+L + + Q+R  P++I     L +L ++ N   S+P+   + 
Sbjct: 344 ----------VGCLHALQKLRMDQNQVRSLPSEIGGCSSLTLLSITCNQFSSLPDELSSC 393

Query: 360 TSLTELDLSDNNISALP 376
           + LT L +S N    LP
Sbjct: 394 SLLTALHISGNRFFQLP 410



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 14/197 (7%)

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           +  +P+ +     +  L+ S N I  LP E+    SL+T I+S N +   P  I   +++
Sbjct: 37  IDCVPASVQHMTWLKLLNFSNNKIGSLPLEIGKLNSLKTFIMSYNLLTTLPPTI-GGMTA 95

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILD--LSYNIA-SLPENPPFSSLPHLQELYLRRM 324
           L+ L + NN + ++P       P+L ++      NI  +  +  P   + H   L L+  
Sbjct: 96  LTELSVSNNQITRLP-------PILGVMTSLTEVNIQDNFLDQHPVEVVEHALLLQLKLE 148

Query: 325 --QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
             +L   P +I RL  L  L+ S N L+++P     L++LT L L+DN ++ LP ELG L
Sbjct: 149 LNRLSNIPPEISRLSTLTFLNFSHNQLRTLPPSIGTLSNLTVLYLNDNKLTRLPIELGHL 208

Query: 383 EPSLQALRLDGNPLRSI 399
            P++ + RLD N +  I
Sbjct: 209 SPTMLS-RLDNNDITII 224



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 2/113 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL ++ N L+ +S +++ S T L  L  S+N +  +P T+G L  L +L + QN++ S
Sbjct: 303 LRKLSLQHNLLSTVSADVLQSLTNLESLNISRNQIVYVPGTVGCLHALQKLRMDQNQVRS 362

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEA 111
           +PS I GC SL    +  N  S+LP EL   S L  L +  N+  +   C+E+
Sbjct: 363 LPSEIGGCSSLTLLSITCNQFSSLPDELSSCSLLTALHISGNRFFQLPRCIES 415


>gi|443707990|gb|ELU03328.1| hypothetical protein CAPTEDRAFT_140756 [Capitella teleta]
          Length = 476

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 187/395 (47%), Gaps = 42/395 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L V+ N++  L   L     +  +L  S N +  +P  +G+L+ L  LD  +N ++ 
Sbjct: 41  LEELMVDANQIKELPRELFYCHGI-RKLTVSDNEITLLPPALGTLANLEHLDFSKNGVID 99

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           IP +I GC  L         + A    LGKL++  T      QL         L L+ L 
Sbjct: 100 IPENIKGCKYL-------RVVEASVNPLGKLTEGFT------QL---------LNLTELF 137

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           L++  L  LP   G+++ LR L L  N L+TL  S        L +  R  +  NE +E 
Sbjct: 138 LNDTFLDFLPGSFGRLSKLRILELRENHLKTLPRSFTR-----LTQIERLDIGNNEFTEL 192

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                D+I   T L     EL  +   + AIPS +    ++  LD S+N ++ +  ++S 
Sbjct: 193 P----DVIGGLTNL----MELWCDTNQIKAIPSVVGNLKQLMFLDASKNRLEFIAEQISE 244

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
           C +L  L LS N ++  P++ L  LS+L+ LK+D+N L  +P   F    ++ + +L+  
Sbjct: 245 CHTLADLHLSDNLLQHLPES-LGRLSNLTSLKVDDNRLTCLP---FSLGGLVSLSELNVG 300

Query: 301 IASLPENPP-FSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
              L + PP    L HL+ LY     L E P ++     L +L L  N+L  +P+    +
Sbjct: 301 GNDLEDLPPSIGLLRHLRTLYADENFLNEIPCELGSCSGLTVLSLRGNNLMYVPDELGRI 360

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
             L  L+LSDN I +LP  L  L+  LQAL L  N
Sbjct: 361 PRLRVLNLSDNKIRSLPFSLTKLK-QLQALWLAEN 394



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 141/329 (42%), Gaps = 63/329 (19%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T L + +I   T L EL    N +  +P  +G+L +L+ LD  +NR+  
Sbjct: 179 IERLDIGNNEFTELPD-VIGGLTNLMELWCDTNQIKAIPSVVGNLKQLMFLDASKNRLEF 237

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE---ACQLRLS 117
           I   IS C +LA+ ++ +N L  LP  LG+LS L +L +  N+L   C+       + LS
Sbjct: 238 IAEQISECHTLADLHLSDNLLQHLPESLGRLSNLTSLKVDDNRLT--CLPFSLGGLVSLS 295

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            L++  N L  LPP IG +  LR L    N L  +   L +                   
Sbjct: 296 ELNVGGNDLEDLPPSIGLLRHLRTLYADENFLNEIPCELGS------------------- 336

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                         + L+V    LSL G NL  +P E+     +  L+LS N I+ LP  
Sbjct: 337 -------------CSGLTV----LSLRGNNLMYVPDELGRIPRLRVLNLSDNKIRSLPFS 379

Query: 238 LSSCASLQTLILSRNKIK--------DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
           L+    LQ L L+ N+ K        + PD   T    L+C  L   P     +D + D 
Sbjct: 380 LTKLKQLQALWLAENQTKPLIKLQSDEDPD---TGKRVLTCYLLPQQPAEDKDADLYSDT 436

Query: 290 ----------PMLQILDLSYNIASLPENP 308
                       +Q   + +  A LP++P
Sbjct: 437 DSFHPSLWEEERMQRKQIHFEFADLPDDP 465



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 117/223 (52%), Gaps = 14/223 (6%)

Query: 208 LSAIPSEIW-EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
           L  IP++++     + +L +  N I+ELP EL  C  ++ L +S N+I   P A L +L+
Sbjct: 27  LDFIPTDVFTHERTLEELMVDANQIKELPRELFYCHGIRKLTVSDNEITLLPPA-LGTLA 85

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
           +L  L    N +  +P +  K    L++++ S N +  L E   F+ L +L EL+L    
Sbjct: 86  NLEHLDFSKNGVIDIP-ENIKGCKYLRVVEASVNPLGKLTEG--FTQLLNLTELFLNDTF 142

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L   P    RL +LRIL+L +N L+++P  F  LT +  LD+ +N  + LP  +G L  +
Sbjct: 143 LDFLPGSFGRLSKLRILELRENHLKTLPRSFTRLTQIERLDIGNNEFTELPDVIGGLT-N 201

Query: 386 LQALRLDGNPLRSI-------RRTILDRGTKAVLKYLKDKIPE 421
           L  L  D N +++I       ++ +    +K  L+++ ++I E
Sbjct: 202 LMELWCDTNQIKAIPSVVGNLKQLMFLDASKNRLEFIAEQISE 244



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 136/314 (43%), Gaps = 34/314 (10%)

Query: 100 HSNQLKEYCVEACQLR-----------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
           H   L+E  V+A Q++           +  L +S+N ++ LPP +G +  L  L  + N 
Sbjct: 37  HERTLEELMVDANQIKELPRELFYCHGIRKLTVSDNEITLLPPALGTLANLEHLDFSKNG 96

Query: 149 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 208
           +  +  ++         KYLR         EAS      +T      +   EL L    L
Sbjct: 97  VIDIPENIKG------CKYLRV-------VEASVNPLGKLTEGFTQLLNLTELFLNDTFL 143

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI--LTSLS 266
             +P       ++  L+L  N ++ LP   +    ++ L +  N+  + PD I  LT+L 
Sbjct: 144 DFLPGSFGRLSKLRILELRENHLKTLPRSFTRLTQIERLDIGNNEFTELPDVIGGLTNLM 203

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQ 325
            L C   D N ++ +PS    ++  L  LD S N +  + E    S    L +L+L    
Sbjct: 204 ELWC---DTNQIKAIPS-VVGNLKQLMFLDASKNRLEFIAEQ--ISECHTLADLHLSDNL 257

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           L+  P  + RL  L  L +  N L  +P     L SL+EL++  N++  LPP +GLL   
Sbjct: 258 LQHLPESLGRLSNLTSLKVDDNRLTCLPFSLGGLVSLSELNVGGNDLEDLPPSIGLLR-H 316

Query: 386 LQALRLDGNPLRSI 399
           L+ L  D N L  I
Sbjct: 317 LRTLYADENFLNEI 330


>gi|428166598|gb|EKX35571.1| hypothetical protein GUITHDRAFT_79708, partial [Guillardia theta
           CCMP2712]
          Length = 442

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 185/407 (45%), Gaps = 49/407 (12%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + K+ ++ N +  L +  I ++  L  L   +N L+ +P  +G LS L  L LH N+I  
Sbjct: 53  LKKIFLQNNYIETLPSE-IGNFPNLAILYLQENKLHDVPPDLGKLSCLSILALHGNQIRY 111

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  +  C SL    + NN L+ +P E+G+ +KL +LDL  N         C+   L  L
Sbjct: 112 IPRDLGHCQSLQVLSLSNNRLTQIPLEIGRCNKLKSLDLKDNPDIAIPPRLCKWTTLKSL 171

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            ++NN +  LP + G++  L  L    N L  L  S       A L  L+S    N DS 
Sbjct: 172 SMNNNEVKSLPSKFGQLVHLVSLSFASNRLVVLPKSF------AFLSRLKSL---NLDSN 222

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE------ 233
             T     + +A   ++TS  + L    ++ +P +I     +  LDLS N I        
Sbjct: 223 LLTFLP--LEIARLTAITS--IRLTDNQVAVLPPQIRAHKYVESLDLSYNLISSIAPQVS 278

Query: 234 -----------------LPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
                            LPPEL    SL  L +  N+I  +P+   ++L+SL  LK+  N
Sbjct: 279 ALRNLLSLRLSYNTLTLLPPELGKLRSLTNLDIVGNRISYFPNH-FSALTSLRVLKISRN 337

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN----IASLPENPPFSSLPHLQELYLRRMQLREAPTD 332
             + +P D  ++   L++L  S N    ++S+ E         L++L+L+   L      
Sbjct: 338 EFKLIP-DCVRNFTSLRVLSASRNKLVTLSSVLEGCIL-----LEQLWLQENLLTSLHPM 391

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
           I  L++L  L+  +N++ SIP    +  +LT L +  N +S LPP L
Sbjct: 392 IGNLERLNSLNFGRNAITSIPPQLGSCVALTALGIYGNGLSRLPPSL 438



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 184/386 (47%), Gaps = 35/386 (9%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L+  PE I +   L ++ L  N I ++PS I    +LA  Y+  N L  +P +LGKLS L
Sbjct: 40  LSKFPEEILNFKNLKKIFLQNNYIETLPSEIGNFPNLAILYLQENKLHDVPPDLGKLSCL 99

Query: 95  GTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
             L LH NQ++    +   CQ  L VL LSNN L+ +P EIG+   L+ L L  NP   +
Sbjct: 100 SILALHGNQIRYIPRDLGHCQ-SLQVLSLSNNRLTQIPLEIGRCNKLKSLDLKDNPDIAI 158

Query: 153 RSSLVNGPTPALLKY--LRSRLPENEDSEASTTKEDLITMATRLSVTS------------ 198
                    P L K+  L+S    N + ++  +K   +     LS  S            
Sbjct: 159 --------PPRLCKWTTLKSLSMNNNEVKSLPSKFGQLVHLVSLSFASNRLVVLPKSFAF 210

Query: 199 ----KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
               K L+L+   L+ +P EI     IT + L+ N +  LPP++ +   +++L LS N I
Sbjct: 211 LSRLKSLNLDSNLLTFLPLEIARLTAITSIRLTDNQVAVLPPQIRAHKYVESLDLSYNLI 270

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSL 313
                 + ++L +L  L+L  N L  +P +    +  L  LD+  N I+  P +  FS+L
Sbjct: 271 SSIAPQV-SALRNLLSLRLSYNTLTLLPPE-LGKLRSLTNLDIVGNRISYFPNH--FSAL 326

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
             L+ L + R + +  P  +     LR+L  S+N L ++    +    L +L L +N ++
Sbjct: 327 TSLRVLKISRNEFKLIPDCVRNFTSLRVLSASRNKLVTLSSVLEGCILLEQLWLQENLLT 386

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSI 399
           +L P +G LE  L +L    N + SI
Sbjct: 387 SLHPMIGNLE-RLNSLNFGRNAITSI 411



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 118/266 (44%), Gaps = 47/266 (17%)

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
           V D     LS  P EI     L+K+ L  N + TL S + N P  A+L YL       ++
Sbjct: 32  VFDAHACRLSKFPEEILNFKNLKKIFLQNNYIETLPSEIGNFPNLAIL-YL-------QE 83

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
           ++      DL  ++  LS+    L+L G  +  IP ++     +  L LS N + ++P E
Sbjct: 84  NKLHDVPPDLGKLSC-LSI----LALHGNQIRYIPRDLGHCQSLQVLSLSNNRLTQIPLE 138

Query: 238 LSSCASLQTLILSRNKIKDWPD-AI---LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           +  C  L++L      +KD PD AI   L   ++L  L ++NN ++ +PS          
Sbjct: 139 IGRCNKLKSL-----DLKDNPDIAIPPRLCKWTTLKSLSMNNNEVKSLPSK--------- 184

Query: 294 ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
                           F  L HL  L     +L   P     L +L+ L+L  N L  +P
Sbjct: 185 ----------------FGQLVHLVSLSFASNRLVVLPKSFAFLSRLKSLNLDSNLLTFLP 228

Query: 354 EGFKNLTSLTELDLSDNNISALPPEL 379
                LT++T + L+DN ++ LPP++
Sbjct: 229 LEIARLTAITSIRLTDNQVAVLPPQI 254



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 1/88 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L    NKL  LS+ ++    +L +L   +NLL  +   IG+L RL  L+  +N I SIP 
Sbjct: 355 LSASRNKLVTLSS-VLEGCILLEQLWLQENLLTSLHPMIGNLERLNSLNFGRNAITSIPP 413

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKL 91
            +  C +L    +  N LS LP  L KL
Sbjct: 414 QLGSCVALTALGIYGNGLSRLPPSLKKL 441



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
           +L + P +IL  + L+ + L  N ++++P    N  +L  L L +N +  +PP+LG L  
Sbjct: 39  RLSKFPEEILNFKNLKKIFLQNNYIETLPSEIGNFPNLAILYLQENKLHDVPPDLGKLS- 97

Query: 385 SLQALRLDGNPLRSIRR 401
            L  L L GN +R I R
Sbjct: 98  CLSILALHGNQIRYIPR 114


>gi|429962037|gb|ELA41581.1| hypothetical protein VICG_01329 [Vittaforma corneae ATCC 50505]
          Length = 425

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 156/343 (45%), Gaps = 63/343 (18%)

Query: 58  ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS 117
           I SI S+I     L + Y+ NN L +LP E+G L  L TL L                  
Sbjct: 109 ITSIDSNIKRLVKLKKLYLWNNNLKSLPPEIGDLVNLKTLHL------------------ 150

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
                NN+L  LP EI ++ +LRKL L+ N  +TL         P  +  L++       
Sbjct: 151 ----DNNNLKTLPSEIRRLVSLRKLYLSDNNFKTL---------PVEIGELKNL------ 191

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
                                +ELSL G  L A+ +EI +   +  L+L+ N  + LP E
Sbjct: 192 ---------------------QELSLSGNKLKALSAEIGKLVNLQDLNLNGNEFELLPAE 230

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           +    +L  L    NK+   P A +  L +L  L LD N L  +PSD   ++  LQ L  
Sbjct: 231 IGKLENLNVLYFRSNKLTTLP-AEIRELKNLQYLYLDYNKLETLPSD-IGELKNLQYLHF 288

Query: 298 SYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
           + N + SLP       L +LQ L LR  +L+  P++I +L+ L  L L+ N L ++P   
Sbjct: 289 NCNKLKSLP--SEIGELKNLQYLDLRNNKLKILPSEIGKLKNLLYLVLNNNELTTLPSEI 346

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
             L +L ELDLS NN+  LP  +  L  SLQ L L GN +  I
Sbjct: 347 GELENLGELDLSGNNLETLPNTIRKLSGSLQLLYLRGNNISEI 389



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 112/261 (42%), Gaps = 38/261 (14%)

Query: 2   SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 61
           +K+ +    +T + +N I     L +L    N L  +P  IG L  L  L L  N + ++
Sbjct: 100 TKVSIPFQGITSIDSN-IKRLVKLKKLYLWNNNLKSLPPEIGDLVNLKTLHLDNNNLKTL 158

Query: 62  PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 120
           PS I    SL + Y+ +N    LP E+G+L  L  L L  N+LK    E  +L  L  L+
Sbjct: 159 PSEIRRLVSLRKLYLSDNNFKTLPVEIGELKNLQELSLSGNKLKALSAEIGKLVNLQDLN 218

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           L+ N    LP EIGK+  L  L    N L TL         PA ++ L++          
Sbjct: 219 LNGNEFELLPAEIGKLENLNVLYFRSNKLTTL---------PAEIRELKNL--------- 260

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
                             + L L+   L  +PS+I E   +  L  + N ++ LP E+  
Sbjct: 261 ------------------QYLYLDYNKLETLPSDIGELKNLQYLHFNCNKLKSLPSEIGE 302

Query: 241 CASLQTLILSRNKIKDWPDAI 261
             +LQ L L  NK+K  P  I
Sbjct: 303 LKNLQYLDLRNNKLKILPSEI 323



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 299 YNIASLPENPPFSSLPH---------------LQELYLRRMQLREAPTDILRLQQLRILD 343
           Y+    PEN    S+P                L++LYL    L+  P +I  L  L+ L 
Sbjct: 90  YSFERYPENETKVSIPFQGITSIDSNIKRLVKLKKLYLWNNNLKSLPPEIGDLVNLKTLH 149

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L  N+L+++P   + L SL +L LSDNN   LP E+G L+ +LQ L L GN L+++   I
Sbjct: 150 LDNNNLKTLPSEIRRLVSLRKLYLSDNNFKTLPVEIGELK-NLQELSLSGNKLKALSAEI 208



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L ++ NKL  L ++ I     L  L  + N L  +P  IG L  L  LDL  N++  
Sbjct: 260 LQYLYLDYNKLETLPSD-IGELKNLQYLHFNCNKLKSLPSEIGELKNLQYLDLRNNKLKI 318

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSV 118
           +PS I    +L    + NN L+ LP+E+G+L  LG LDL  N L+     +      L +
Sbjct: 319 LPSEIGKLKNLLYLVLNNNELTTLPSEIGELENLGELDLSGNNLETLPNTIRKLSGSLQL 378

Query: 119 LDLSNNSLSGLPPEIG-KMTTLRKLLLTG 146
           L L  N++S    EIG K  TL K  L G
Sbjct: 379 LYLRGNNIS----EIGEKGRTLGKKELRG 403


>gi|213627581|gb|AAI71620.1| Zgc:152984 protein [Danio rerio]
          Length = 606

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 180/379 (47%), Gaps = 45/379 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I S  + L  L L  N+I  +P  +  C  L    + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFSFEKTLEELYLDANQIEELPKQLFNCQLLYRLSLPDNDLTV 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLP----------- 130
           LP  +  L  L  LD+  N ++E+   ++ C++ L++++ S N +S LP           
Sbjct: 84  LPPGIANLINLRELDVSKNGIQEFPENIKNCKV-LAIVEASVNPISKLPEGFTQLLSLSQ 142

Query: 131 ------------PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
                          G++T L+ L L  N L+ L  S+       L +  R  L  NE +
Sbjct: 143 LYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSM-----HKLTQLERLDLGSNEFT 197

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E     E L  +        +EL ++G  L+ +P  I    +++ LD+S+N+++ +  ++
Sbjct: 198 EVPEVLEQLTGI--------RELWMDGNKLTFVPGMIGALKQLSYLDVSKNNVEMVEEQI 249

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           S C +LQ L+LS N +   P +I  SL  LS LK+D+N L  +P D    +  L  LD S
Sbjct: 250 SGCENLQDLLLSNNALTQLPGSI-GSLKKLSTLKVDDNQLMYLP-DTIGGLSHLDELDCS 307

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
           +N I +LP +       +L+        L + P ++  L+ + +L L  N L+++PE   
Sbjct: 308 FNEIEALPSS--IGQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKLENLPEEMG 365

Query: 358 NLTSLTELDLSDNNISALP 376
           ++  L  ++LSDN +  LP
Sbjct: 366 DMQKLKVINLSDNKLRNLP 384



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 173/379 (45%), Gaps = 43/379 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N LTVL    IA+   L EL  SKN +   PE I +   L  ++   N I  
Sbjct: 71  LYRLSLPDNDLTVLPPG-IANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISK 129

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P   +   SL++ Y+ +  L  LPA  G+L+KL  L+L  NQLK       +L +L  L
Sbjct: 130 LPEGFTQLLSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMHKLTQLERL 189

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL +N  + +P  + ++T +R+L + GN L     + V G                    
Sbjct: 190 DLGSNEFTEVPEVLEQLTGIRELWMDGNKL-----TFVPG-------------------- 224

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                  +I    +LS     L +   N+  +  +I     +  L LS N++ +LP  + 
Sbjct: 225 -------MIGALKQLSY----LDVSKNNVEMVEEQISGCENLQDLLLSNNALTQLPGSIG 273

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           S   L TL +  N++   PD I   LS L  L    N +  +PS        L+     +
Sbjct: 274 SLKKLSTLKVDDNQLMYLPDTI-GGLSHLDELDCSFNEIEALPS-SIGQCVNLRTFAADH 331

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +A +P  P   SL ++  L+L   +L   P ++  +Q+L++++LS N L+++P  F  
Sbjct: 332 NLLAQMP--PEMGSLKNVTVLFLHSNKLENLPEEMGDMQKLKVINLSDNKLRNLPYSFTK 389

Query: 359 LTSLTELDLSDNNISALPP 377
           L  +T + LS+N    L P
Sbjct: 390 LNQMTAMWLSENQSKPLIP 408



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 137/304 (45%), Gaps = 20/304 (6%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQL L  L L +N L+ LPP I  +
Sbjct: 33  SLEQVPKEIFSFEKTLEELYLDANQIEELPKQLFNCQL-LYRLSLPDNDLTVLPPGIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             LR+L ++ N ++    ++ N    A++             EAS      +       +
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLAIV-------------EASVNPISKLPEGFTQLL 138

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
           +  +L L    L  +P+      ++  L+L  N ++ LP  +     L+ L L  N+  +
Sbjct: 139 SLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMHKLTQLERLDLGSNEFTE 198

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 316
            P+ +L  L+ +  L +D N L  VP      +  L  LD+S N   + E    S   +L
Sbjct: 199 VPE-VLEQLTGIRELWMDGNKLTFVPG-MIGALKQLSYLDVSKNNVEMVEEQ-ISGCENL 255

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           Q+L L    L + P  I  L++L  L +  N L  +P+    L+ L ELD S N I ALP
Sbjct: 256 QDLLLSNNALTQLPGSIGSLKKLSTLKVDDNQLMYLPDTIGGLSHLDELDCSFNEIEALP 315

Query: 377 PELG 380
             +G
Sbjct: 316 SSIG 319



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 135/320 (42%), Gaps = 64/320 (20%)

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N      L 
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFSFEKTLEELYLDANQIEELPKQLFN----CQLL 71

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
           Y R  LP+N+                               L+ +P  I     + +LD+
Sbjct: 72  Y-RLSLPDND-------------------------------LTVLPPGIANLINLRELDV 99

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPD----------------------AILTS 264
           S+N IQE P  + +C  L  +  S N I   P+                      A    
Sbjct: 100 SKNGIQEFPENIKNCKVLAIVEASVNPISKLPEGFTQLLSLSQLYLNDAFLEFLPASFGR 159

Query: 265 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRR 323
           L+ L  L+L  N L+ +P    K +  L+ LDL  N    +PE      L  ++EL++  
Sbjct: 160 LTKLQILELRENQLKMLPKSMHK-LTQLERLDLGSNEFTEVPE--VLEQLTGIRELWMDG 216

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            +L   P  I  L+QL  LD+S+N+++ + E      +L +L LS+N ++ LP  +G L+
Sbjct: 217 NKLTFVPGMIGALKQLSYLDVSKNNVEMVEEQISGCENLQDLLLSNNALTQLPGSIGSLK 276

Query: 384 PSLQALRLDGNPLRSIRRTI 403
             L  L++D N L  +  TI
Sbjct: 277 -KLSTLKVDDNQLMYLPDTI 295


>gi|195574155|ref|XP_002105055.1| GD21289 [Drosophila simulans]
 gi|194200982|gb|EDX14558.1| GD21289 [Drosophila simulans]
          Length = 2647

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 178/388 (45%), Gaps = 41/388 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL    N +  +P+    L RL +L L  N I  +P  I    +L E  +  N +  +
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P ++  L  L   D  SN + +      QL+ L+VL L++ SL+ LP + G +T L  L 
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L+ L  ++       L K  R  L +NE        EDL      L     EL L
Sbjct: 159 LRENLLKHLPETISQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWL 205

Query: 204 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
           +   L  +P E+    ++T LD+S N ++ELP E+S   SL  L L++N ++  PD I  
Sbjct: 206 DHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGI-A 264

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRR 323
            LS L+ LKLD N L+++                         N    +  ++QEL L  
Sbjct: 265 KLSRLTILKLDQNRLQRL-------------------------NDTLGNCENMQELILTE 299

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
             L E P  I ++ +L  L++ +N+L+ +P       +L  L L DN +  LPPELG   
Sbjct: 300 NFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCT 359

Query: 384 PSLQALRLDGNPLRSIRRTILDRGTKAV 411
             L  L + GN L  +  ++++   KAV
Sbjct: 360 -VLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R S T +EL L+  ++  +P   +    + KL LS N I  LPP++ +  +L  L +SRN
Sbjct: 34  RYSRTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRN 93

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS-YNIASLPENPPFS 311
            I D PD I   L SL      +NP+ ++PS GF  +  L +L L+  ++ +LP +  F 
Sbjct: 94  DIPDIPDDI-KHLQSLQVADFSSNPIPKLPS-GFSQLKNLTVLGLNDMSLTTLPAD--FG 149

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
           SL  L+ L LR   L+  P  I +L +L+ LDL  N ++ +P     L  L EL L  N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQ 209

Query: 372 ISALPPELGLL 382
           +  LPPELGLL
Sbjct: 210 LQRLPPELGLL 220



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 126/265 (47%), Gaps = 38/265 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
             S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +     L E ++ +
Sbjct: 148 FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDH 207

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N L  LP  I K++
Sbjct: 208 NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 267

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L  L L  N L+ L  +L N                          E++          
Sbjct: 268 RLTILKLDQNRLQRLNDTLGNC-------------------------ENM---------- 292

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            +EL L    LS +P+ I +  +++ L++ RN+++ LP E+  CA+L  L L  NK+K  
Sbjct: 293 -QELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 351

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P   L + + L  L +  N L  +P
Sbjct: 352 PPE-LGNCTVLHVLDVSGNQLLYLP 375



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 154/360 (42%), Gaps = 65/360 (18%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +P+ I  L  L   D   N I  +PS  S   +L    + +
Sbjct: 79  IQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ LPA+ G L++L +L+L  N LK       QL +L  LDL +N +  LPP +G + 
Sbjct: 139 MSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L L  N L+ L   L                              L+T  T L V+
Sbjct: 199 GLHELWLDHNQLQRLPPEL-----------------------------GLLTKLTYLDVS 229

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L                              +ELP E+S   SL  L L++N ++  
Sbjct: 230 ENRL------------------------------EELPNEISGLVSLTDLDLAQNLLEAL 259

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIAS-LPENPPFSSLPHL 316
           PD I   LS L+ LKLD N L+++ +D   +   +Q L L+ N  S LP +     +  L
Sbjct: 260 PDGI-AKLSRLTILKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPAS--IGQMTKL 315

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
             L + R  L   P +I +   L +L L  N L+ +P    N T L  LD+S N +  LP
Sbjct: 316 SNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP 375



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P 
Sbjct: 272 LKLDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPL 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I  C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS 
Sbjct: 331 EIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391


>gi|323455615|gb|EGB11483.1| hypothetical protein AURANDRAFT_21287, partial [Aureococcus
           anophagefferens]
          Length = 496

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 186/412 (45%), Gaps = 26/412 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L + GN+LT L  + +     L  L    N L  +PE++G L  L  LD+  NR+  
Sbjct: 94  LRYLRLAGNRLTSLPKDELGKMGRLEVLKLDSNDLERIPESVGELRSLRELDVSNNRLCE 153

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P S+    S+      +N+L  LP ++  L  L  L L  N L E   +   L  L+ L
Sbjct: 154 LPESLQFVQSIECLRASSNSLVKLP-DVSGLQLLRDLQLRGNALFELPDDLPDLISLTRL 212

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL---RSSLVNGPT------------PAL 164
           D+ NN++  LPP +G +  LR L ++ N + T     S L+N               P +
Sbjct: 213 DVHNNAIHKLPPRLGNLVKLRVLNISSNRIVTFPDSASGLLNCEVFLLRENELTLLGPWI 272

Query: 165 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
             + R+   +  ++   +    + ++   +     EL L    +  +P EI  A  +   
Sbjct: 273 GGWKRAAFVDATENRIESVDRAVGSLRNLI-----ELRLSRNRIEQLPPEIGLARALECF 327

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           D S   +  LP EL + A L TL L RN I       +  L S++ L L  N +  +P D
Sbjct: 328 DASACLLCRLPVELGALAVLHTLRLRRNAISGHLPEQIGLLRSVTDLDLSRNTIESLP-D 386

Query: 285 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
               +  L  LDLS+N +++LPE         L ELYL   ++++ P  +     LR+LD
Sbjct: 387 TIGGLEELVKLDLSHNRLSTLPE--AVVQCARLHELYLSSNRIKKLPLHLGECVSLRVLD 444

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L  N +  IP     L +L ++ L  N + ALP ++  L  ++  L LD NP
Sbjct: 445 LQSNVIAEIPANLACLVNLKKIYLGKNLLRALPLDVVNLCETVDELHLDRNP 496



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 31/161 (19%)

Query: 223 KLDLSRNSIQELPPEL-------SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
           +LD SR + + LPP+L        + A L  + +  NK++  P   L   +SL  L+L  
Sbjct: 42  RLDASRQAYRVLPPKLYVGHEAQEALADLVVIDVGDNKLEKLPSGFLMWFASLRYLRLAG 101

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
           N L  +P D    +  L++L L  N                         L   P  +  
Sbjct: 102 NRLTSLPKDELGKMGRLEVLKLDSN------------------------DLERIPESVGE 137

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           L+ LR LD+S N L  +PE  + + S+  L  S N++  LP
Sbjct: 138 LRSLRELDVSNNRLCELPESLQFVQSIECLRASSNSLVKLP 178


>gi|28972678|dbj|BAC65755.1| mKIAA1225 protein [Mus musculus]
          Length = 1401

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 186/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 49  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 108

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 109 LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQL 168

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 169 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 223

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        +E  ++G  L+ IP  I    ++T LD+S+N+I+ +   +S
Sbjct: 224 VPEVLEQLSGL--------REFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGIS 275

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +C + Q  +LS N ++  P+ I  SL +++ LK+D N L  +P D    +  ++ LD S+
Sbjct: 276 TCENPQDFLLSSNSLQQLPETI-GSLKNVTTLKIDENQLMYLP-DSIGGLRSIEELDCSF 333

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   +  ++  L+L   +L   P ++  +Q
Sbjct: 334 NEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQ 393

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L  LT + LSDN    L P
Sbjct: 394 KLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIP 433



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 118/251 (47%), Gaps = 24/251 (9%)

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
           KMTT R L +   P R LR       T   L Y    L +          +++ T    L
Sbjct: 25  KMTTKRSLFVRLVPCRCLRGE---EETVTTLDYSHCSLEQ--------VPKEIFTFEKTL 73

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
               +EL L+   +  +P +++    + KL L  N +  LP  +++  +L+ L +S+N I
Sbjct: 74  ----EELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGI 129

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFS 311
           +++P+ I  +   L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F 
Sbjct: 130 QEFPENI-KNCKVLTIVEASVNPISKLP-DGFSQ--LLNLTQLYLNDAFLEFLPAN--FG 183

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
            L  LQ L LR  QL+  P  + RL QL  LDL  N    +PE  + L+ L E  +  N 
Sbjct: 184 RLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNR 243

Query: 372 ISALPPELGLL 382
           ++ +P  +G L
Sbjct: 244 LTFIPGFIGSL 254



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 83/158 (52%), Gaps = 2/158 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ LDV  N + ++    I++     + + S N L  +PETIGSL  +  L + +N+++ 
Sbjct: 257 LTYLDVSKNNIEMVEEG-ISTCENPQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 315

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P SI G  S+ E     N + ALP+ +G+L+ + T     N L++   E    + ++VL
Sbjct: 316 LPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVL 375

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
            L  N L  LP E+G M  L+ + L+ N L+ L  S  
Sbjct: 376 FLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 413



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 150/327 (45%), Gaps = 29/327 (8%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQ  L  L L +N L+ LP  I  +
Sbjct: 58  SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQ-SLHKLSLPDNDLTTLPASIANL 116

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR---SRLPENEDSEASTTKEDLITMATR 193
             LR+L ++ N ++    ++ N     +++      S+LP+                +  
Sbjct: 117 INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDG--------------FSQL 162

Query: 194 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNK 253
           L++T  +L L    L  +P+      ++  L+L  N ++ LP  ++    L+ L L  N+
Sbjct: 163 LNLT--QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNE 220

Query: 254 IKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF-KDIPMLQILDLSYNIASLPENPPFSS 312
             + P+ +L  LS L    +D N L  +P  GF   +  L  LD+S N   + E    S+
Sbjct: 221 FTEVPE-VLEQLSGLREFWMDGNRLTFIP--GFIGSLRQLTYLDVSKNNIEMVEEG-IST 276

Query: 313 LPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNI 372
             + Q+  L    L++ P  I  L+ +  L + +N L  +P+    L S+ ELD S N I
Sbjct: 277 CENPQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEI 336

Query: 373 SALPPELGLLEPSLQALRLDGNPLRSI 399
            ALP  +G L  +++    D N L+ +
Sbjct: 337 EALPSSIGQLT-NMRTFAADHNYLQQL 362


>gi|1184075|gb|AAC15779.1| Cf-2.1 [Solanum pimpinellifolium]
 gi|60327192|gb|AAX19019.1| Cf-2.1 [Solanum pimpinellifolium]
 gi|1587673|prf||2207203A Cf-2 gene
          Length = 1112

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 184/407 (45%), Gaps = 52/407 (12%)

Query: 29  IASKNLLNGMPETIGSLSRLIRLDLHQNRILS-------------------------IPS 63
           ++  N+   +P  IG+L+ L+ LDL+ N+I                           IP 
Sbjct: 102 LSKNNIYGTIPPEIGNLTNLVYLDLNNNQISGTIPPQIGLLAKLQIIRIFHNQLNGFIPK 161

Query: 64  SISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYC-VEACQLR-LSVLD 120
            I    SL +  +G N LS  +PA +G L+ L  L L++NQL      E   LR L+ LD
Sbjct: 162 EIGYLRSLTKLSLGINFLSGSIPASVGNLNNLSFLYLYNNQLSGSIPEEISYLRSLTELD 221

Query: 121 LSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPEN 175
           LS+N+L+G +P  +G M  L  L L GN L         G  P  + YLRS     L EN
Sbjct: 222 LSDNALNGSIPASLGNMNNLSFLFLYGNQLS--------GSIPEEICYLRSLTYLDLSEN 273

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-EL 234
             + +       +   + L +   +LS       +IP EI     +  L LS N++   +
Sbjct: 274 ALNGSIPASLGNLNNLSFLFLYGNQLS------GSIPEEIGYLRSLNVLGLSENALNGSI 327

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P  L +  +L  L L  N++     A L +L++LS L L NN L         ++  L +
Sbjct: 328 PASLGNLKNLSRLNLVNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSM 387

Query: 295 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQS-I 352
           L L  N  S        +L +L  LYL   QL  + P +I  L  L  LDLS NS+   I
Sbjct: 388 LYLYNNQLSGSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLSSLTYLDLSNNSINGFI 447

Query: 353 PEGFKNLTSLTELDLSDNNI-SALPPELGLLEPSLQALRLDGNPLRS 398
           P  F N+++L  L L +N + S++P E+G L  SL  L L  N L  
Sbjct: 448 PASFGNMSNLAFLFLYENQLASSVPEEIGYLR-SLNVLDLSENALNG 493



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 195/449 (43%), Gaps = 87/449 (19%)

Query: 25  LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNAL- 81
           L+ L    N L+G +PE IG LS L  LDL  N I   IP+S     +LA  ++  N L 
Sbjct: 409 LSRLYLYNNQLSGSIPEEIGYLSSLTYLDLSNNSINGFIPASFGNMSNLAFLFLYENQLA 468

Query: 82  SALPAELGKLSKLGTLDLHSNQLKEYC-------------------------VEACQLR- 115
           S++P E+G L  L  LDL  N L                              E   LR 
Sbjct: 469 SSVPEEIGYLRSLNVLDLSENALNGSIPASFGNLNNLSRLNLVNNQLSGSIPEEIGYLRS 528

Query: 116 LSVLDLSNNSLSG-------------------------LPPEIGKMTTLRKLLLTGNPLR 150
           L+VLDLS N+L+G                         +P EIG + +L  L L+ N L 
Sbjct: 529 LNVLDLSENALNGSIPASFGNLNNLSRLNLVNNQLSGSIPEEIGYLRSLNDLGLSENAL- 587

Query: 151 TLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
                  NG  PA L  L +     L  N+ S +   +   ++  T LS+ +   SL G+
Sbjct: 588 -------NGSIPASLGNLNNLSMLYLYNNQLSGSIPEEIGYLSSLTYLSLGNN--SLNGL 638

Query: 207 NLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 265
               IP+       +  L L+ N+ I E+P  + +  SL+ L + RN +K      L ++
Sbjct: 639 ----IPASFGNMRNLQALILNDNNLIGEIPSSVCNLTSLEVLYMPRNNLKGKVPQCLGNI 694

Query: 266 SSLSCLKLDNNPLR-QVPSDGFKDIPMLQILDLSYNI--ASLPENPPFSSLPHLQELYLR 322
           S+L  L + +N    ++PS    ++  LQILD   N    ++P+   F ++  L+   ++
Sbjct: 695 SNLQVLSMSSNSFSGELPSS-ISNLTSLQILDFGRNNLEGAIPQ--CFGNISSLEVFDMQ 751

Query: 323 RMQLREA-PTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNIS-ALPPEL 379
             +L    PT+      L  L+L  N L+  IP    N   L  LDL DN ++   P  L
Sbjct: 752 NNKLSGTLPTNFSIGCSLISLNLHGNELEDEIPRSLDNCKKLQVLDLGDNQLNDTFPMWL 811

Query: 380 GLLEPSLQALRLDGN----PLRSIRRTIL 404
           G L P L+ LRL  N    P+RS R  I+
Sbjct: 812 GTL-PELRVLRLTSNKLHGPIRSSRAEIM 839



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 147/341 (43%), Gaps = 52/341 (15%)

Query: 25  LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALS 82
           L  L  S N  +G +P +I +L+ L  LD  +N +  +IP       SL  F M NN LS
Sbjct: 697 LQVLSMSSNSFSGELPSSISNLTSLQILDFGRNNLEGAIPQCFGNISSLEVFDMQNNKLS 756

Query: 83  A-LPAELGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLDLSNNSLSG-LPPEIGKMT 137
             LP        L +L+LH N+L++     ++ C+ +L VLDL +N L+   P  +G + 
Sbjct: 757 GTLPTNFSIGCSLISLNLHGNELEDEIPRSLDNCK-KLQVLDLGDNQLNDTFPMWLGTLP 815

Query: 138 TLRKLLLTGNPLRT-LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
            LR L LT N L   +RSS      P L     SR   ++D   S   E L  M T +  
Sbjct: 816 ELRVLRLTSNKLHGPIRSSRAEIMFPDLRIIDLSRNAFSQDLPTSLF-EHLKGMRT-VDK 873

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIK 255
           T +E S E     ++         +TK          L  E+    SL T+I LS NK +
Sbjct: 874 TMEEPSYESYYDDSVVV-------VTK---------GLELEIVRILSLYTVIDLSSNKFE 917

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 315
               ++L  L ++  L + +N L+         + +L+ LDLS+N  S            
Sbjct: 918 GHIPSVLGDLIAIRILNVSHNALQGYIPSSLGSLSILESLDLSFNQLS------------ 965

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS-IPEG 355
                       E P  +  L  L  L+LS N LQ  IP+G
Sbjct: 966 -----------GEIPQQLASLTFLEFLNLSHNYLQGCIPQG 995



 Score = 45.4 bits (106), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 87/183 (47%), Gaps = 35/183 (19%)

Query: 221 ITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
           +  LDLS+N+I   +PPE+ +  +L  L L+ N+I       +  L+ L  +++ +N L 
Sbjct: 97  LENLDLSKNNIYGTIPPEIGNLTNLVYLDLNNNQISGTIPPQIGLLAKLQIIRIFHNQL- 155

Query: 280 QVPSDGF--KDIPMLQIL-DLSYNIASLPENPPFS--SLPHLQELYLRRMQLREAPTDIL 334
               +GF  K+I  L+ L  LS  I  L  + P S  +L +L  LYL   QL        
Sbjct: 156 ----NGFIPKEIGYLRSLTKLSLGINFLSGSIPASVGNLNNLSFLYLYNNQLS------- 204

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDG 393
                           SIPE    L SLTELDLSDN ++  +P  LG +  +L  L L G
Sbjct: 205 ---------------GSIPEEISYLRSLTELDLSDNALNGSIPASLGNMN-NLSFLFLYG 248

Query: 394 NPL 396
           N L
Sbjct: 249 NQL 251


>gi|358419356|ref|XP_003584212.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Bos taurus]
          Length = 1052

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 166/348 (47%), Gaps = 25/348 (7%)

Query: 76  MGNNALSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPE 132
           +GNN L  +P  LG  L  L  L L  N+  +      +L   L+ LD+S+N LS L  E
Sbjct: 68  LGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHHLTELDVSHNRLSVLGAE 127

Query: 133 -IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 191
            +G +  LRKL L+ N L  L + L        L    +RL    DS A  ++       
Sbjct: 128 AVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSFAGLSR------- 180

Query: 192 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 251
                  + L ++   L+A P ++ +   + +LD+S N ++ LP ++S+  +L+ L LS 
Sbjct: 181 ------LRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSG 234

Query: 252 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFS 311
            ++   P      L+SL  L LDNN LR +P+  F  +  L++L+LS N   L E  P +
Sbjct: 235 AELGTLPSG-FCELASLESLMLDNNGLRALPAQ-FSRLQRLKMLNLSSN---LLEEFPAA 289

Query: 312 SLP--HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
            LP   L+ELYL R QL   P  I  L +L  L L  N ++ +P+    LT L EL L  
Sbjct: 290 LLPLAGLEELYLSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQG 349

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           N I+ LP   G L   +   ++  NPL      +  +G   +  Y K+
Sbjct: 350 NQIAVLPDNFGQLS-RVGLWKIKDNPLIQPPYEVCMKGIPYIAAYQKE 396



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 136/294 (46%), Gaps = 16/294 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++LDV  N+L+VL    + +   L +L  S N L  +P  +G+L  L  LD+  NR+  
Sbjct: 111 LTELDVSHNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAH 170

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P S +G   L    + +N L+A P +L +L  L  LD+ SN+L+    +   LR L +L
Sbjct: 171 LPDSFAGLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKIL 230

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LS   L  LP    ++ +L  L+L  N LR L +               SRL   +   
Sbjct: 231 WLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQF-------------SRLQRLKMLN 277

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            S+   +    A       +EL L    L+++P  I   G +  L L  N I+ LP  + 
Sbjct: 278 LSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLPDSIV 337

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKDIPML 292
               L+ L+L  N+I   PD     LS +   K+ +NPL Q P +   K IP +
Sbjct: 338 ELTGLEELVLQGNQIAVLPDN-FGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYI 390



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 5/183 (2%)

Query: 219 GEITKLDLSRNSIQELPPELSSC-ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
           G+I  L+L  N ++E+P  L S   SL+ L+L RN+    P A+      L+ L + +N 
Sbjct: 61  GDIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHHLTELDVSHNR 120

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
           L  + ++    +  L+ L+LS+N + +LP      +L HL+EL +   +L   P     L
Sbjct: 121 LSVLGAEAVGALRELRKLNLSHNQLPALPAQ--LGALVHLEELDVSFNRLAHLPDSFAGL 178

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            +LR LD+  N L + P     L +L ELD+S N +  LP ++  L  +L+ L L G  L
Sbjct: 179 SRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALR-ALKILWLSGAEL 237

Query: 397 RSI 399
            ++
Sbjct: 238 GTL 240



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 10/145 (6%)

Query: 10  KLTVLSNNLIASW-------TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           K+  LS+NL+  +         L EL  S+N L  +P  I  L RL+ L L  NRI  +P
Sbjct: 274 KMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLP 333

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 122
            SI     L E  +  N ++ LP   G+LS++G   +  N L +   E C   +  +   
Sbjct: 334 DSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 393

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGN 147
              L+   P +       KLLL G 
Sbjct: 394 QKELAHSQPAVQPRL---KLLLMGQ 415


>gi|428306331|ref|YP_007143156.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
 gi|428247866|gb|AFZ13646.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
          Length = 1011

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 158/350 (45%), Gaps = 61/350 (17%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
            S N L  +P  +  L  L +LD+  N + SIP  ++    L E  +    L+ +P  + 
Sbjct: 64  VSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVKLTEIPDAIA 123

Query: 90  KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           KL+                       L+ LDLSNN ++ +P  I K+T L +L+L  N +
Sbjct: 124 KLT----------------------NLTQLDLSNNQITQIPEAIAKLTNLTQLVLFNNQI 161

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
                               +++PE             I   T L+    +  L    ++
Sbjct: 162 --------------------TQIPE------------AIAKLTNLT----QFILSNNQIT 185

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            IP  I     +T+L LS N I ++P  +++  +L  L L  NKI   P+AI  +L +L+
Sbjct: 186 QIPEAIANLTNLTQLILSNNQITQIPEAIANLTNLTQLDLLNNKITQIPEAI-ANLINLT 244

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA 329
            L L NN + Q+P    K   + Q++     I  +PE    + L +L +L L   ++ + 
Sbjct: 245 QLDLLNNKITQIPEAIAKLTNLTQLILSDNKITQIPE--AIAKLTNLTQLDLHSNKITQI 302

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
           P  I +L  L  LDL  N +  IPE    LT+LT+LDLSDN+I+ +P E+
Sbjct: 303 PEAIAKLTNLTQLDLRSNKITQIPEAIAKLTNLTQLDLSDNSITNIPLEM 352



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 139/283 (49%), Gaps = 16/283 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+ GN L  + + ++     L ELI  +  L  +P+ I  L+ L +LDL  N+I  
Sbjct: 82  LRKLDISGNPLESIPD-VVTQILHLEELILIRVKLTEIPDAIAKLTNLTQLDLSNNQITQ 140

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP +I+   +L +  + NN ++ +P  + KL+ L    L +NQ+ +       L  L+ L
Sbjct: 141 IPEAIAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQFILSNNQITQIPEAIANLTNLTQL 200

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LSNN ++ +P  I  +T L +L L  N +  +  ++ N      L  L +++       
Sbjct: 201 ILSNNQITQIPEAIANLTNLTQLDLLNNKITQIPEAIANLINLTQLDLLNNKI------- 253

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             T   + I   T L+    +L L    ++ IP  I +   +T+LDL  N I ++P  ++
Sbjct: 254 --TQIPEAIAKLTNLT----QLILSDNKITQIPEAIAKLTNLTQLDLHSNKITQIPEAIA 307

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
              +L  L L  NKI   P+AI   L++L+ L L +N +  +P
Sbjct: 308 KLTNLTQLDLRSNKITQIPEAI-AKLTNLTQLDLSDNSITNIP 349



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 91/167 (54%), Gaps = 9/167 (5%)

Query: 13  VLSNN-------LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
           +LSNN        IA+ T LT+L    N +  +PE I +L  L +LDL  N+I  IP +I
Sbjct: 201 ILSNNQITQIPEAIANLTNLTQLDLLNNKITQIPEAIANLINLTQLDLLNNKITQIPEAI 260

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 124
           +   +L +  + +N ++ +P  + KL+ L  LDLHSN++ +      +L  L+ LDL +N
Sbjct: 261 AKLTNLTQLILSDNKITQIPEAIAKLTNLTQLDLHSNKITQIPEAIAKLTNLTQLDLRSN 320

Query: 125 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP-TPALLKYLRS 170
            ++ +P  I K+T L +L L+ N +  +   ++N      +L YLR 
Sbjct: 321 KITQIPEAIAKLTNLTQLDLSDNSITNIPLEMLNSKDAKEILNYLRQ 367



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 110/240 (45%), Gaps = 45/240 (18%)

Query: 183 TKEDLITMATR-LSVTSKELSLEGMNLSAIPSEIW--------------EAGEIT----- 222
           T+E+L+ +  R ++   +EL L G  L+ +P EI               EA E       
Sbjct: 2   TQEELLQLIDRAVAEGWRELDLSGQELTELPGEIGKLQQLESLILGKKIEAYEFVGDRYL 61

Query: 223 ----------------------KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
                                 KLD+S N ++ +P  ++    L+ LIL R K+ + PDA
Sbjct: 62  EKVSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVKLTEIPDA 121

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELY 320
           I   L++L+ L L NN + Q+P    K   + Q++  +  I  +PE    + L +L +  
Sbjct: 122 I-AKLTNLTQLDLSNNQITQIPEAIAKLTNLTQLVLFNNQITQIPE--AIAKLTNLTQFI 178

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L   Q+ + P  I  L  L  L LS N +  IPE   NLT+LT+LDL +N I+ +P  + 
Sbjct: 179 LSNNQITQIPEAIANLTNLTQLILSNNQITQIPEAIANLTNLTQLDLLNNKITQIPEAIA 238



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 10/161 (6%)

Query: 223 KLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           +LDLS   + ELP E+     L++LIL + KI+ +       +      K+  N L+ +P
Sbjct: 20  ELDLSGQELTELPGEIGKLQQLESLILGK-KIEAYE-----FVGDRYLEKVSGNNLKTLP 73

Query: 283 SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
            +    +P L+ LD+S N + S+P+    + + HL+EL L R++L E P  I +L  L  
Sbjct: 74  LE-LLGLPNLRKLDISGNPLESIPD--VVTQILHLEELILIRVKLTEIPDAIAKLTNLTQ 130

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLL 382
           LDLS N +  IPE    LT+LT+L L +N I+ +P  +  L
Sbjct: 131 LDLSNNQITQIPEAIAKLTNLTQLVLFNNQITQIPEAIAKL 171


>gi|403257262|ref|XP_003921246.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Saimiri boliviensis boliviensis]
          Length = 860

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 191/401 (47%), Gaps = 30/401 (7%)

Query: 13  VLSNNLIASWTMLTELIAS-------KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
            L+NN I ++    E + +       KN L  +P+T+ SL  L  L+L  N++   P ++
Sbjct: 240 FLNNNYIENFPSDLECLGNLEILSLGKNKLRHLPDTLPSLKNLRILNLEYNQLTIFPKAL 299

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNN 124
                L    +  N +S+LP E+ +L  L TL L  N+L    VE  Q L++  L L++N
Sbjct: 300 CFLPKLISLDLTGNLISSLPKEIRELKHLETLLLDHNKLTFLAVEIFQLLKIKELQLADN 359

Query: 125 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR------SRLPENEDS 178
            L  +  +I     LR L+L  N L+ +   +      A+L+ L       + LP+N   
Sbjct: 360 KLEVISHKIENFRELRILILDKNILKNIPEKI---SYCAMLECLSLSDNKLTELPKNIHK 416

Query: 179 -----EASTTKEDLITMATRLSVTSKELSLE--GMNLSAIPSEIWEAGEITKLDLSRNSI 231
                +    + +++ +   +S  +   S+E  G  ++++P EI    +ITK++L+ N I
Sbjct: 417 LKNLRKLHVNRNNMVKINDNISHLNNICSIEFSGNIITSVPIEIKNCQKITKVELNYNKI 476

Query: 232 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 291
              P  L +  SL  L ++ N I + P  I  S   L  L+L+ N L  + S+ F  +  
Sbjct: 477 MYFPVGLCALDSLYYLSVNGNYISEIPVDISFS-KQLLHLELNENKLL-IFSEHFCSLIN 534

Query: 292 LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
           L+ LDL  N I  +P     S++  L  L L   +    P ++  L+ LR+LDLS+N LQ
Sbjct: 535 LKYLDLGKNQIKKIP--ASISNMISLHVLILCCNKFETFPRELCTLENLRVLDLSENQLQ 592

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
            I     NL  + +L+ S N     P EL  L+ SL+ L +
Sbjct: 593 KISSDICNLKGIQKLNFSSNQFIHFPIELCQLQ-SLEQLNI 632



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 189/415 (45%), Gaps = 33/415 (7%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I+   ML  L  S N L  +P+ I  L  L +L +++N ++ I  +IS   ++       
Sbjct: 391 ISYCAMLECLSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVKINDNISHLNNICSIEFSG 450

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++++P E+    K+  ++L+ N++  + V  C L  L  L ++ N +S +P +I    
Sbjct: 451 NIITSVPIEIKNCQKITKVELNYNKIMYFPVGLCALDSLYYLSVNGNYISEIPVDISFSK 510

Query: 138 TLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            L  L L  N L        SL+N      LKYL   L +N+  +   +  ++I++   +
Sbjct: 511 QLLHLELNENKLLIFSEHFCSLIN------LKYLD--LGKNQIKKIPASISNMISLHVLI 562

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
              +K            P E+     +  LDLS N +Q++  ++ +   +Q L  S N+ 
Sbjct: 563 LCCNK--------FETFPRELCTLENLRVLDLSENQLQKISSDICNLKGIQKLNFSSNQF 614

Query: 255 KDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
             +P  +  L SL  L+  ++    L  +P +   ++  L+ LD+S N I  +P N    
Sbjct: 615 IHFPIELCQLQSLEQLNISQIKGRKLTILPGE-LSNMTQLKELDISNNAIREIPRN--IG 671

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNN 371
            L +L  L+    Q+   P  +L L  L+ L+LS N+L ++P    NL SL E++  DN 
Sbjct: 672 ELRNLVSLHAHNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSDIYNLFSLKEINFDDNP 731

Query: 372 ISALPPE------LGLLEPSLQ-ALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           +   P E      L  +   LQ A   D   L  I + + +  T+   K+L  K+
Sbjct: 732 LLRPPMEICKGKQLYTIARYLQRADERDEKVLEKIFKIVANNITETNFKFLCQKL 786



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 174/397 (43%), Gaps = 43/397 (10%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE---- 87
           +N L+ +P  I  L  L  L++  N I  IP  +    ++ + ++ NN +   P++    
Sbjct: 197 ENGLSSLPSEIQLLHNLRILNVSHNHISHIPKEMLQLGNIRQLFLNNNYIENFPSDLECL 256

Query: 88  -------LGK------------LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLS 127
                  LGK            L  L  L+L  NQL  +    C L +L  LDL+ N +S
Sbjct: 257 GNLEILSLGKNKLRHLPDTLPSLKNLRILNLEYNQLTIFPKALCFLPKLISLDLTGNLIS 316

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            LP EI ++  L  LLL  N L  L   +       LLK    +L +N+    S   E+ 
Sbjct: 317 SLPKEIRELKHLETLLLDHNKLTFLAVEIF-----QLLKIKELQLADNKLEVISHKIENF 371

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
             +  R+ +  K +      L  IP +I     +  L LS N + ELP  +    +L+ L
Sbjct: 372 REL--RILILDKNI------LKNIPEKISYCAMLECLSLSDNKLTELPKNIHKLKNLRKL 423

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPE 306
            ++RN +    D I + L+++  ++   N +  VP +  K+   +  ++L+YN I   P 
Sbjct: 424 HVNRNNMVKINDNI-SHLNNICSIEFSGNIITSVPIE-IKNCQKITKVELNYNKIMYFP- 480

Query: 307 NPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELD 366
                +L  L  L +    + E P DI   +QL  L+L++N L    E F +L +L  LD
Sbjct: 481 -VGLCALDSLYYLSVNGNYISEIPVDISFSKQLLHLELNENKLLIFSEHFCSLINLKYLD 539

Query: 367 LSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L  N I  +P  +  +  SL  L L  N   +  R +
Sbjct: 540 LGKNQIKKIPASISNM-ISLHVLILCCNKFETFPREL 575



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 142/309 (45%), Gaps = 41/309 (13%)

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           ++L    L   P +I K+  ++ L L  N +RT +     G     L  L S L   E+ 
Sbjct: 146 VNLEAKGLQEFPKDILKIKYVKYLYLDKNQIRTFQ-----GADSGDLLGLES-LSLQENG 199

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
            +S   E  I +   L +    L++   ++S IP E+ + G I +L L+ N I+  P +L
Sbjct: 200 LSSLPSE--IQLLHNLRI----LNVSHNHISHIPKEMLQLGNIRQLFLNNNYIENFPSDL 253

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
               +L+ L L +NK++  PD  L SL +L  L L+ N L   P      +P L  LDL+
Sbjct: 254 ECLGNLEILSLGKNKLRHLPDT-LPSLKNLRILNLEYNQLTIFPK-ALCFLPKLISLDLT 311

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL--------------------- 336
            N I+SLP+      L HL+ L L   +L     +I +L                     
Sbjct: 312 GNLISSLPK--EIRELKHLETLLLDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIE 369

Query: 337 --QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
             ++LRIL L +N L++IPE       L  L LSDN ++ LP  +  L+ +L+ L ++ N
Sbjct: 370 NFRELRILILDKNILKNIPEKISYCAMLECLSLSDNKLTELPKNIHKLK-NLRKLHVNRN 428

Query: 395 PLRSIRRTI 403
            +  I   I
Sbjct: 429 NMVKINDNI 437



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 119/283 (42%), Gaps = 42/283 (14%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L V GN ++ +  ++  S  +L  L  ++N L    E   SL  L  LDL +N+I  IP+
Sbjct: 492 LSVNGNYISEIPVDISFSKQLL-HLELNENKLLIFSEHFCSLINLKYLDLGKNQIKKIPA 550

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           SIS   SL    +  N     P EL  L  L  LDL  NQL++   + C L+ +  L+ S
Sbjct: 551 SISNMISLHVLILCCNKFETFPRELCTLENLRVLDLSENQLQKISSDICNLKGIQKLNFS 610

Query: 123 NNSLSGLPPEIGKMTTLRKLLLT---GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +N     P E+ ++ +L +L ++   G  L  L   L N                     
Sbjct: 611 SNQFIHFPIELCQLQSLEQLNISQIKGRKLTILPGELSN--------------------- 649

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                       T+L    KEL +    +  IP  I E   +  L    N I  LPP L 
Sbjct: 650 -----------MTQL----KELDISNNAIREIPRNIGELRNLVSLHAHNNQISYLPPSLL 694

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           S   LQ L LS N +   P  I  +L SL  +  D+NPL + P
Sbjct: 695 SLNDLQQLNLSGNNLTALPSDIY-NLFSLKEINFDDNPLLRPP 736



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 1/108 (0%)

Query: 6   VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
           ++G KLT+L   L ++ T L EL  S N +  +P  IG L  L+ L  H N+I  +P S+
Sbjct: 635 IKGRKLTILPGEL-SNMTQLKELDISNNAIREIPRNIGELRNLVSLHAHNNQISYLPPSL 693

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 113
                L +  +  N L+ALP+++  L  L  ++   N L    +E C+
Sbjct: 694 LSLNDLQQLNLSGNNLTALPSDIYNLFSLKEINFDDNPLLRPPMEICK 741


>gi|125810355|ref|XP_001361460.1| GA10197 [Drosophila pseudoobscura pseudoobscura]
 gi|54636635|gb|EAL26038.1| GA10197 [Drosophila pseudoobscura pseudoobscura]
          Length = 848

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 165/376 (43%), Gaps = 50/376 (13%)

Query: 11  LTVLSNNL------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 64
           L V SNNL      I S   L  L  ++NL+  +P+ I +   L RLDL  N +  +P +
Sbjct: 68  LHVNSNNLESIPQAIGSLRQLQNLDLNRNLIVNVPDEIKACKHLTRLDLSCNSLQRLPDA 127

Query: 65  ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 123
           ++   SL E  +    L  LPA  G+L  L  L+L  N L        +L  L  LD+  
Sbjct: 128 VTSLISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGG 187

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N  + LP  +G++ +LR+L +  N +R + +++              +L E +  EA+  
Sbjct: 188 NEFTELPEVVGELKSLRELWIDFNQIRRVSANI-------------GKLRELQHFEANGN 234

Query: 184 KEDLITMATRLS--VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
             D  T+ + LS     + LS+   NL A P  +     +       N + ELP  +S  
Sbjct: 235 LLD--TLPSELSNWRNVEVLSICSNNLEAFPFSVGMLKSLVTFKCESNGLTELPDSISYL 292

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
             L+ L+LS NK+   P  I   L SL  L  D N LRQ+P D       L +L ++ N 
Sbjct: 293 EQLEELVLSHNKLIRLPSTI-GMLRSLRFLFADENQLRQLP-DELCSCQQLSVLSMANN- 349

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
                                  QL   P +I  L +L+++++  N + ++P    NL +
Sbjct: 350 -----------------------QLSALPQNIGNLGKLKVINVVNNYINALPVSMLNLVN 386

Query: 362 LTELDLSDNNISALPP 377
           LT L LSDN    L P
Sbjct: 387 LTSLWLSDNQSQPLVP 402



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 101/192 (52%), Gaps = 7/192 (3%)

Query: 214 EIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
           E+W+    + +L LS   +Q LPP+L  C  L+ L ++ N ++  P AI  SL  L  L 
Sbjct: 34  EVWQHERTLEELYLSTTRLQSLPPQLFYCQGLRVLHVNSNNLESIPQAI-GSLRQLQNLD 92

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 331
           L+ N +  VP D  K    L  LDLS N +  LP+    +SL  LQEL L    L   P 
Sbjct: 93  LNRNLIVNVP-DEIKACKHLTRLDLSCNSLQRLPD--AVTSLISLQELLLNETYLEFLPA 149

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           +  RL  LRIL+L  N+L ++P+    L +L  LD+  N  + LP  +G L+ SL+ L +
Sbjct: 150 NFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGELK-SLRELWI 208

Query: 392 DGNPLRSIRRTI 403
           D N +R +   I
Sbjct: 209 DFNQIRRVSANI 220



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 153/353 (43%), Gaps = 61/353 (17%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           L  + N L  +P+ IGSL +L  LDL++N I+++P  I  C  L    +  N+L  LP  
Sbjct: 68  LHVNSNNLESIPQAIGSLRQLQNLDLNRNLIVNVPDEIKACKHLTRLDLSCNSLQRLPDA 127

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 147
           +  L                      + L  L L+   L  LP   G++  LR L L  N
Sbjct: 128 VTSL----------------------ISLQELLLNETYLEFLPANFGRLVNLRILELRLN 165

Query: 148 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 207
            L TL  S+V      L+   R  +  NE +E      +L ++        +EL ++   
Sbjct: 166 NLITLPKSMVR-----LVNLQRLDIGGNEFTELPEVVGELKSL--------RELWIDFNQ 212

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           +  + + I +  E+   + + N +  LP ELS+  +++ L +  N ++ +P ++   L S
Sbjct: 213 IRRVSANIGKLRELQHFEANGNLLDTLPSELSNWRNVEVLSICSNNLEAFPFSV-GMLKS 271

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L   K ++N L ++P                            S L  L+EL L   +L 
Sbjct: 272 LVTFKCESNGLTELPDS-------------------------ISYLEQLEELVLSHNKLI 306

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
             P+ I  L+ LR L   +N L+ +P+   +   L+ L +++N +SALP  +G
Sbjct: 307 RLPSTIGMLRSLRFLFADENQLRQLPDELCSCQQLSVLSMANNQLSALPQNIG 359



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 64/129 (49%), Gaps = 2/129 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
              E N LT L ++ I+    L EL+ S N L  +P TIG L  L  L   +N++  +P 
Sbjct: 275 FKCESNGLTELPDS-ISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADENQLRQLPD 333

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            +  C  L+   M NN LSALP  +G L KL  +++ +N +    V    L  L+ L LS
Sbjct: 334 ELCSCQQLSVLSMANNQLSALPQNIGNLGKLKVINVVNNYINALPVSMLNLVNLTSLWLS 393

Query: 123 NNSLSGLPP 131
           +N    L P
Sbjct: 394 DNQSQPLVP 402



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 15/106 (14%)

Query: 281 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH-------LQELYLRRMQLREAPTDI 333
            P   FK   ++  LD S        N P +  P        L+ELYL   +L+  P  +
Sbjct: 8   FPCFKFKHEEVIDKLDYS--------NTPLTDFPEVWQHERTLEELYLSTTRLQSLPPQL 59

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
              Q LR+L ++ N+L+SIP+   +L  L  LDL+ N I  +P E+
Sbjct: 60  FYCQGLRVLHVNSNNLESIPQAIGSLRQLQNLDLNRNLIVNVPDEI 105


>gi|428179184|gb|EKX48056.1| hypothetical protein GUITHDRAFT_93733 [Guillardia theta CCMP2712]
          Length = 567

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 183/436 (41%), Gaps = 112/436 (25%)

Query: 20  ASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQNRILSIP-SSISGCCSLAEFY 75
           AS   LT LIA   S+N ++ +P+ + SL +L  L L  NRI SIP S +  C +L E  
Sbjct: 46  ASIHALTNLIALDLSENDISVLPDEVCSLLKLEALYLDDNRISSIPLSEMGSCTALLEIV 105

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK 135
             NN +  +P E                       +C   L++L +  N++  +P +IG 
Sbjct: 106 ADNNLIKEIPREF----------------------SCLTSLTLLGIGFNNIVTIPSQIGM 143

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           MT ++ L+L  N +    SS                                I+   +L 
Sbjct: 144 MTAMKSLILQKNEIIYFPSS--------------------------------ISWLMQL- 170

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
              + L++ G  +S  P  + + G +  LD SRN +++L P + +   ++ ++LS NKI 
Sbjct: 171 ---ETLNMSGNAVSVFPKSVCKVGNLYSLDFSRNDMEKLVPYIGNLLGMKEMVLSFNKID 227

Query: 256 DWP----------------------DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
           + P                       A + +L+SL+CL + +N + ++PS+ F D+  LQ
Sbjct: 228 EIPAQIGKLVHLTTLKLDFNRLTFLHAAIGALTSLTCLDVSHNQIEELPSEFF-DLTNLQ 286

Query: 294 ILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ--------------- 338
            L L++N   +  +   SS   L ELY+    LR  P  I  L++               
Sbjct: 287 QLALNHN-KLIYLSGAVSSYQRLAELYVSHNYLRALPDAISSLKKLINMLFLDDCNLNQI 345

Query: 339 ---------LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
                    LR L    N++  +P     LTSL  L+LS N I   P    L   ++  L
Sbjct: 346 PDAIGYCISLRCLSAGGNTITLVPAAISGLTSLEILNLSMNKICFFPEVYNL--TNMVQL 403

Query: 390 RLDGNPLRSIRRTILD 405
            L+ N + +I+ TI D
Sbjct: 404 NLNDNLIANIKMTIGD 419



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 190/421 (45%), Gaps = 47/421 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L ++ N+++ +  + + S T L E++A  NL+  +P     L+ L  L +  N I++
Sbjct: 77  LEALYLDDNRISSIPLSEMGSCTALLEIVADNNLIKEIPREFSCLTSLTLLGIGFNNIVT 136

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IPS I    ++    +  N +   P+ +  L +L TL++  N +  +    C++  L  L
Sbjct: 137 IPSQIGMMTAMKSLILQKNEIIYFPSSISWLMQLETLNMSGNAVSVFPKSVCKVGNLYSL 196

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D S N +  L P IG +  +++++L+ N +  +         PA +  L        D  
Sbjct: 197 DFSRNDMEKLVPYIGNLLGMKEMVLSFNKIDEI---------PAQIGKLVHLTTLKLDFN 247

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             T     I   T L+     L +    +  +PSE ++   + +L L+ N +  L   +S
Sbjct: 248 RLTFLHAAIGALTSLTC----LDVSHNQIEELPSEFFDLTNLQQLALNHNKLIYLSGAVS 303

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP------------SDGFK 287
           S   L  L +S N ++  PDAI +    ++ L LD+  L Q+P            S G  
Sbjct: 304 SYQRLAELYVSHNYLRALPDAISSLKKLINMLFLDDCNLNQIPDAIGYCISLRCLSAGGN 363

Query: 288 DIPM----------LQILDLSYN-IASLPENPPFSSLPHLQELYLRR---MQLREAPTDI 333
            I +          L+IL+LS N I   PE     +L ++ +L L       ++    D+
Sbjct: 364 TITLVPAAISGLTSLEILNLSMNKICFFPE---VYNLTNMVQLNLNDNLIANIKMTIGDM 420

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
           +RL++L I     N L ++P     L SL  L+L  N I +LP  +G L   L++L+L G
Sbjct: 421 VRLEELYI---GNNKLSTVPSTVGCLLSLHSLELQRNRILSLPESIGALTL-LRSLKLHG 476

Query: 394 N 394
           N
Sbjct: 477 N 477



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 166/383 (43%), Gaps = 66/383 (17%)

Query: 21  SWTM-LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 79
           SW M L  L  S N ++  P+++  +  L  LD  +N +  +   I     + E  +  N
Sbjct: 165 SWLMQLETLNMSGNAVSVFPKSVCKVGNLYSLDFSRNDMEKLVPYIGNLLGMKEMVLSFN 224

Query: 80  ALSALPAELGKLSKLGTLDLHSNQLKE-YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
            +  +PA++GKL  L TL L  N+L   +        L+ LD+S+N +  LP E   +T 
Sbjct: 225 KIDEIPAQIGKLVHLTTLKLDFNRLTFLHAAIGALTSLTCLDVSHNQIEELPSEFFDLTN 284

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALL----KYLRSRLPENEDSEASTTKEDLITMATRL 194
           L++L L  N L  L  ++ +    A L     YLR+ LP+     A ++ + LI M    
Sbjct: 285 LQQLALNHNKLIYLSGAVSSYQRLAELYVSHNYLRA-LPD-----AISSLKKLINM---- 334

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
                 L L+  NL+ IP  I     +  L    N+I  +P  +S   SL+ L LS NKI
Sbjct: 335 ------LFLDDCNLNQIPDAIGYCISLRCLSAGGNTITLVPAAISGLTSLEILNLSMNKI 388

Query: 255 KDWPDAI-LTSLSSLSC--------------------LKLDNNPLRQVPSDGFKDIPMLQ 293
             +P+   LT++  L+                     L + NN L  VPS     +  L 
Sbjct: 389 CFFPEVYNLTNMVQLNLNDNLIANIKMTIGDMVRLEELYIGNNKLSTVPST-VGCLLSLH 447

Query: 294 ILDLSYN-IASLPENPPFSSL---------------------PHLQELYLRRMQLREAPT 331
            L+L  N I SLPE+    +L                      HL+ L LR  Q+ E P+
Sbjct: 448 SLELQRNRILSLPESIGALTLLRSLKLHGNLLSSLPSSVSRLIHLEVLTLRDNQISEPPS 507

Query: 332 DILRLQQLRILDLSQNSLQSIPE 354
            IL L  L+ L L +N L  +P+
Sbjct: 508 AILSLSSLKTLTLGKNKLDKMPD 530



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 138/297 (46%), Gaps = 21/297 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR-LDLHQNRIL 59
           + +L +  NKL  LS   ++S+  L EL  S N L  +P+ I SL +LI  L L    + 
Sbjct: 285 LQQLALNHNKLIYLSGA-VSSYQRLAELYVSHNYLRALPDAISSLKKLINMLFLDDCNLN 343

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 119
            IP +I  C SL     G N ++ +PA +  L+ L  L+L  N++  +        +  L
Sbjct: 344 QIPDAIGYCISLRCLSAGGNTITLVPAAISGLTSLEILNLSMNKICFFPEVYNLTNMVQL 403

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPENE 176
           +L++N ++ +   IG M  L +L +  N L T+ S++    +   L+  R+R   LPE+ 
Sbjct: 404 NLNDNLIANIKMTIGDMVRLEELYIGNNKLSTVPSTVGCLLSLHSLELQRNRILSLPES- 462

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
                      I   T L    + L L G  LS++PS +     +  L L  N I E P 
Sbjct: 463 -----------IGALTLL----RSLKLHGNLLSSLPSSVSRLIHLEVLTLRDNQISEPPS 507

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQ 293
            + S +SL+TL L +NK+   PD  +  L S    + D+   R    DG +D  +  
Sbjct: 508 AILSLSSLKTLTLGKNKLDKMPDKQVQRLKSSGMEEEDDENTRAPRRDGMRDTRVFH 564



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 9/193 (4%)

Query: 189 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 248
           T  T LS+   E+  EG+    +P+ I     +  LDLS N I  LP E+ S   L+ L 
Sbjct: 27  TSLTFLSIVENEI--EGI---PVPASIHALTNLIALDLSENDISVLPDEVCSLLKLEALY 81

Query: 249 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY-NIASLPEN 307
           L  N+I   P + + S ++L  +  DNN ++++P + F  +  L +L + + NI ++P  
Sbjct: 82  LDDNRISSIPLSEMGSCTALLEIVADNNLIKEIPRE-FSCLTSLTLLGIGFNNIVTIPSQ 140

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                +  ++ L L++ ++   P+ I  L QL  L++S N++   P+    + +L  LD 
Sbjct: 141 --IGMMTAMKSLILQKNEIIYFPSSISWLMQLETLNMSGNAVSVFPKSVCKVGNLYSLDF 198

Query: 368 SDNNISALPPELG 380
           S N++  L P +G
Sbjct: 199 SRNDMEKLVPYIG 211



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 5/202 (2%)

Query: 220 EITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP-DAILTSLSSLSCLKLDNNPL 278
           ++  L L RN +  LP +L  C SL  L +  N+I+  P  A + +L++L  L L  N +
Sbjct: 5   QLQSLILDRNRLSSLPAQLGQCTSLTFLSIVENEIEGIPVPASIHALTNLIALDLSENDI 64

Query: 279 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
             +P D    +  L+ L L  N I+S+P +    S   L E+      ++E P +   L 
Sbjct: 65  SVLP-DEVCSLLKLEALYLDDNRISSIPLS-EMGSCTALLEIVADNNLIKEIPREFSCLT 122

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
            L +L +  N++ +IP     +T++  L L  N I   P  +  L   L+ L + GN + 
Sbjct: 123 SLTLLGIGFNNIVTIPSQIGMMTAMKSLILQKNEIIYFPSSISWLM-QLETLNMSGNAVS 181

Query: 398 SIRRTILDRGTKAVLKYLKDKI 419
              +++   G    L + ++ +
Sbjct: 182 VFPKSVCKVGNLYSLDFSRNDM 203


>gi|428176940|gb|EKX45822.1| hypothetical protein GUITHDRAFT_58686, partial [Guillardia theta
           CCMP2712]
          Length = 417

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 174/341 (51%), Gaps = 20/341 (5%)

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           + + I    S+    +  N +S LP +   L+ L  L  H NQLK    E  +LR L +L
Sbjct: 1   LQTKIDEFTSVTSLNISCNQISGLPLQFFNLTNLTVLKSHQNQLKNLLPEIYKLRQLEIL 60

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N L  LP  IG++  +R++ L  N L  L +  +   +   LK +R      +++ 
Sbjct: 61  WLHQNKLRSLPSTIGQLDRVRQMTLEDNMLEALPTHFIFLTS---LKEIRL-----QNNP 112

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             +  +D+  +++      + L L   NL  +P+ +    +++ L+L +N+IQ LP   S
Sbjct: 113 YLSPPKDIAKLSSL-----RRLDLSVNNLEFVPATMGRLIDLSSLNLRQNNIQSLPDTFS 167

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
              +L+ L+L+ N+I   P +  + +SSL  L+L  N LR V SD F+ +  L+ ++L+ 
Sbjct: 168 DLMNLRILVLTYNQISQLPQS-FSKVSSLWELELSYNNLRDV-SDSFRSMARLKRINLNS 225

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N + ++P+    S    L+ L     QL+  P+++L+   ++ ++LSQN L+++P   + 
Sbjct: 226 NRLLTIPKT--LSLCLELETLTATSNQLKIIPSNLLKFPAMKEINLSQNLLETVPPSIQA 283

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           + SL  L+L  NN+     ++  L   L+++ L  N +R I
Sbjct: 284 MVSLRVLNLESNNLKVFDEKICFLN-MLESVNLSRNFIRCI 323



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 184/381 (48%), Gaps = 20/381 (5%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I  +T +T L  S N ++G+P    +L+ L  L  HQN++ ++   I     L   ++  
Sbjct: 5   IDEFTSVTSLNISCNQISGLPLQFFNLTNLTVLKSHQNQLKNLLPEIYKLRQLEILWLHQ 64

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L +LP+ +G+L ++  + L  N L+        L  L  + L NN     P +I K++
Sbjct: 65  NKLRSLPSTIGQLDRVRQMTLEDNMLEALPTHFIFLTSLKEIRLQNNPYLSPPKDIAKLS 124

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
           +LR+L L+ N L       V      L+      L +N       T  DL+ +       
Sbjct: 125 SLRRLDLSVNNLE-----FVPATMGRLIDLSSLNLRQNNIQSLPDTFSDLMNL------- 172

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
            + L L    +S +P    +   + +L+LS N+++++     S A L+ + L+ N++   
Sbjct: 173 -RILVLTYNQISQLPQSFSKVSSLWELELSYNNLRDVSDSFRSMARLKRINLNSNRLLTI 231

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHL 316
           P  +   L  L  L   +N L+ +PS+  K  P ++ ++LS N+  ++P  P   ++  L
Sbjct: 232 PKTLSLCLE-LETLTATSNQLKIIPSNLLK-FPAMKEINLSQNLLETVP--PSIQAMVSL 287

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           + L L    L+     I  L  L  ++LS+N ++ IP   ++LT+LT LD+S N++SA+ 
Sbjct: 288 RVLNLESNNLKVFDEKICFLNMLESVNLSRNFIRCIPSEVQSLTNLTMLDISQNHLSAIA 347

Query: 377 PELGLLEPSLQALRLDGNPLR 397
           PE+  L   L+ L L  N L+
Sbjct: 348 PEIRFL-TRLRHLLLADNSLK 367


>gi|321460374|gb|EFX71417.1| hypothetical protein DAPPUDRAFT_327214 [Daphnia pulex]
          Length = 1847

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 167/376 (44%), Gaps = 45/376 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL+   N +  +P+    L++L +L L  N I  IP  I    +L E  +  N +S +
Sbjct: 36  LEELLLDANHIRDLPKNFFRLAKLRKLSLSDNEIQRIPQDIQNFENLVELDVSRNDISDI 95

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +  +  L   D  SN +        QL+ L+VL L++ SLS LP + G ++ L+ + 
Sbjct: 96  PETIKHVKALQVADFSSNPIPRLPAGFVQLKNLTVLGLNDMSLSSLPLDFGSLSNLQSVE 155

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--EL 201
           L  N LRTL  S+       L K  R  L +N          D+  +   +       EL
Sbjct: 156 LRENLLRTLPESMSQ-----LTKLERLDLGDN----------DIEILPAHIGSLPALTEL 200

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
            L+   L  +P E+ +   +  LD+S N +  +P E+    SL  L LS+N ++  PD I
Sbjct: 201 WLDHNQLGQLPKELCQLTNLACLDVSENHLDSMPEEIGGLISLTDLHLSQNFLESLPDGI 260

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYL 321
             +LS L+ LK+D N                ++  L+Y I              LQEL L
Sbjct: 261 -GALSKLTILKVDQN----------------RLTTLNYAIGKCVA---------LQELIL 294

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGL 381
               L E PT I  + +L  L++ +N L  +P    +L  L  L L +N +  LP ELG 
Sbjct: 295 TENFLTELPTSIGNMTKLTNLNVDRNRLHELPVEVGHLVCLNVLSLRENKLHFLPNELGD 354

Query: 382 LEPSLQALRLDGNPLR 397
               L  L + GN L+
Sbjct: 355 CS-ELHVLDVSGNRLQ 369



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 122/249 (48%), Gaps = 15/249 (6%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L+ +P   GSLS L  ++L +N + ++P S+S    L    +G+N +  LPA +G L  L
Sbjct: 138 LSSLPLDFGSLSNLQSVELRENLLRTLPESMSQLTKLERLDLGDNDIEILPAHIGSLPAL 197

Query: 95  GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             L L  NQL +   E CQL  L+ LD+S N L  +P EIG + +L  L L+ N L +L 
Sbjct: 198 TELWLDHNQLGQLPKELCQLTNLACLDVSENHLDSMPEEIGGLISLTDLHLSQNFLESLP 257

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
             +       +LK  ++RL         TT    +  A    V  +EL L    L+ +P+
Sbjct: 258 DGIGALSKLTILKVDQNRL---------TT----LNYAIGKCVALQELILTENFLTELPT 304

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
            I    ++T L++ RN + ELP E+     L  L L  NK+   P+  L   S L  L +
Sbjct: 305 SIGNMTKLTNLNVDRNRLHELPVEVGHLVCLNVLSLRENKLHFLPNE-LGDCSELHVLDV 363

Query: 274 DNNPLRQVP 282
             N L+ +P
Sbjct: 364 SGNRLQYLP 372



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 110/228 (48%), Gaps = 27/228 (11%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++LSL    +  IP +I     + +LD+SRN I ++P  +    +LQ    S N I   P
Sbjct: 60  RKLSLSDNEIQRIPQDIQNFENLVELDVSRNDISDIPETIKHVKALQVADFSSNPIPRLP 119

Query: 259 DAILT----------------------SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
              +                       SLS+L  ++L  N LR +P +    +  L+ LD
Sbjct: 120 AGFVQLKNLTVLGLNDMSLSSLPLDFGSLSNLQSVELRENLLRTLP-ESMSQLTKLERLD 178

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           L  N I  LP +    SLP L EL+L   QL + P ++ +L  L  LD+S+N L S+PE 
Sbjct: 179 LGDNDIEILPAH--IGSLPALTELWLDHNQLGQLPKELCQLTNLACLDVSENHLDSMPEE 236

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              L SLT+L LS N + +LP  +G L   L  L++D N L ++   I
Sbjct: 237 IGGLISLTDLHLSQNFLESLPDGIGALS-KLTILKVDQNRLTTLNYAI 283



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 85/156 (54%), Gaps = 2/156 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LDV  N L  +    I     LT+L  S+N L  +P+ IG+LS+L  L + QNR+ ++  
Sbjct: 223 LDVSENHLDSMPEE-IGGLISLTDLHLSQNFLESLPDGIGALSKLTILKVDQNRLTTLNY 281

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           +I  C +L E  +  N L+ LP  +G ++KL  L++  N+L E  VE   L  L+VL L 
Sbjct: 282 AIGKCVALQELILTENFLTELPTSIGNMTKLTNLNVDRNRLHELPVEVGHLVCLNVLSLR 341

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
            N L  LP E+G  + L  L ++GN L+ L  SL  
Sbjct: 342 ENKLHFLPNELGDCSELHVLDVSGNRLQYLPLSLTG 377



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 159/354 (44%), Gaps = 41/354 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N++  +  + I ++  L EL  S+N ++ +PETI  +  L   D   N I  
Sbjct: 59  LRKLSLSDNEIQRIPQD-IQNFENLVELDVSRNDISDIPETIKHVKALQVADFSSNPIPR 117

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P+      +L    + + +LS+LP + G LS L +++L  N L+       QL +L  L
Sbjct: 118 LPAGFVQLKNLTVLGLNDMSLSSLPLDFGSLSNLQSVELRENLLRTLPESMSQLTKLERL 177

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL +N +  LP  IG +  L +L L  N L  L   L      A L    + L       
Sbjct: 178 DLGDNDIEILPAHIGSLPALTELWLDHNQLGQLPKELCQLTNLACLDVSENHL------- 230

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
             +  E++  +   +S+T  +L L    L ++P  I    ++T L + +N +  L   + 
Sbjct: 231 -DSMPEEIGGL---ISLT--DLHLSQNFLESLPDGIGALSKLTILKVDQNRLTTLNYAIG 284

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C +LQ LIL+ N + + P +I  +++ L+ L +D N L ++P +               
Sbjct: 285 KCVALQELILTENFLTELPTSI-GNMTKLTNLNVDRNRLHELPVE--------------- 328

Query: 300 NIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
                        L  L  L LR  +L   P ++    +L +LD+S N LQ +P
Sbjct: 329 ----------VGHLVCLNVLSLRENKLHFLPNELGDCSELHVLDVSGNRLQYLP 372



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 117/257 (45%), Gaps = 41/257 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N + +L  + I S   LTEL    N L  +P+ +  L+ L  LD+ +N + S
Sbjct: 174 LERLDLGDNDIEILPAH-IGSLPALTELWLDHNQLGQLPKELCQLTNLACLDVSENHLDS 232

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK--EYCVEACQLRLSV 118
           +P  I G  SL + ++  N L +LP  +G LSKL  L +  N+L    Y +  C + L  
Sbjct: 233 MPEEIGGLISLTDLHLSQNFLESLPDGIGALSKLTILKVDQNRLTTLNYAIGKC-VALQE 291

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           L L+ N L+ LP  IG MT L  L +  N L  L         P  + +L          
Sbjct: 292 LILTENFLTELPTSIGNMTKLTNLNVDRNRLHEL---------PVEVGHL---------- 332

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                            V    LSL    L  +P+E+ +  E+  LD+S N +Q LP  L
Sbjct: 333 -----------------VCLNVLSLRENKLHFLPNELGDCSELHVLDVSGNRLQYLPLSL 375

Query: 239 SSCASLQTLILSRNKIK 255
           +   +L+ + LS N+ +
Sbjct: 376 TGL-NLKAIWLSENQAQ 391



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 61/122 (50%), Gaps = 12/122 (9%)

Query: 281 VPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQL 339
           VP D ++    L+ L L  N I  LP+N  F  L  L++L L   +++  P DI   + L
Sbjct: 25  VPEDLWRYSRSLEELLLDANHIRDLPKN--FFRLAKLRKLSLSDNEIQRIPQDIQNFENL 82

Query: 340 RILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE---------LGLLEPSLQALR 390
             LD+S+N +  IPE  K++ +L   D S N I  LP           LGL + SL +L 
Sbjct: 83  VELDVSRNDISDIPETIKHVKALQVADFSSNPIPRLPAGFVQLKNLTVLGLNDMSLSSLP 142

Query: 391 LD 392
           LD
Sbjct: 143 LD 144


>gi|359080498|ref|XP_003588007.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Bos taurus]
          Length = 1026

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 166/348 (47%), Gaps = 25/348 (7%)

Query: 76  MGNNALSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPE 132
           +GNN L  +P  LG  L  L  L L  N+  +      +L   L+ LD+S+N LS L  E
Sbjct: 42  LGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHHLTELDVSHNRLSVLGAE 101

Query: 133 -IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 191
            +G +  LRKL L+ N L  L + L        L    +RL    DS A  ++       
Sbjct: 102 AVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSFAGLSR------- 154

Query: 192 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 251
                  + L ++   L+A P ++ +   + +LD+S N ++ LP ++S+  +L+ L LS 
Sbjct: 155 ------LRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSG 208

Query: 252 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFS 311
            ++   P      L+SL  L LDNN LR +P+  F  +  L++L+LS N   L E  P +
Sbjct: 209 AELGTLPSG-FCELASLESLMLDNNGLRALPAQ-FSRLQRLKMLNLSSN---LLEEFPAA 263

Query: 312 SLP--HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
            LP   L+ELYL R QL   P  I  L +L  L L  N ++ +P+    LT L EL L  
Sbjct: 264 LLPLAGLEELYLSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQG 323

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           N I+ LP   G L   +   ++  NPL      +  +G   +  Y K+
Sbjct: 324 NQIAVLPDNFGQLS-RVGLWKIKDNPLIQPPYEVCMKGIPYIAAYQKE 370



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 136/294 (46%), Gaps = 16/294 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++LDV  N+L+VL    + +   L +L  S N L  +P  +G+L  L  LD+  NR+  
Sbjct: 85  LTELDVSHNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAH 144

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P S +G   L    + +N L+A P +L +L  L  LD+ SN+L+    +   LR L +L
Sbjct: 145 LPDSFAGLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKIL 204

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LS   L  LP    ++ +L  L+L  N LR L +               SRL   +   
Sbjct: 205 WLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQF-------------SRLQRLKMLN 251

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            S+   +    A       +EL L    L+++P  I   G +  L L  N I+ LP  + 
Sbjct: 252 LSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLPDSIV 311

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKDIPML 292
               L+ L+L  N+I   PD     LS +   K+ +NPL Q P +   K IP +
Sbjct: 312 ELTGLEELVLQGNQIAVLPDN-FGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYI 364



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 5/183 (2%)

Query: 219 GEITKLDLSRNSIQELPPELSSC-ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
           G+I  L+L  N ++E+P  L S   SL+ L+L RN+    P A+      L+ L + +N 
Sbjct: 35  GDIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHHLTELDVSHNR 94

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
           L  + ++    +  L+ L+LS+N + +LP      +L HL+EL +   +L   P     L
Sbjct: 95  LSVLGAEAVGALRELRKLNLSHNQLPALPAQ--LGALVHLEELDVSFNRLAHLPDSFAGL 152

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            +LR LD+  N L + P     L +L ELD+S N +  LP ++  L  +L+ L L G  L
Sbjct: 153 SRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALR-ALKILWLSGAEL 211

Query: 397 RSI 399
            ++
Sbjct: 212 GTL 214



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 10/145 (6%)

Query: 10  KLTVLSNNLIASW-------TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           K+  LS+NL+  +         L EL  S+N L  +P  I  L RL+ L L  NRI  +P
Sbjct: 248 KMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLP 307

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 122
            SI     L E  +  N ++ LP   G+LS++G   +  N L +   E C   +  +   
Sbjct: 308 DSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 367

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGN 147
              L+   P +       KLLL G 
Sbjct: 368 QKELAHSQPAVQPRL---KLLLMGQ 389


>gi|440804073|gb|ELR24954.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 827

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 178/398 (44%), Gaps = 42/398 (10%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           S+  L  +P  +   +    L+++ N++ SIP  I     L    +  N L  LP E+G 
Sbjct: 374 SRRQLTSVPPQVWQSTDATILNMYMNKLESIPPDIGHLKGLTALGLNENNLKKLPPEIGN 433

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L++L  LDL  N+L+        L +LS L L  N L  LP EIG + +L  L +  N L
Sbjct: 434 LTRLRILDLRYNKLRTVPANIKHLTQLSKLFLRFNRLVELPEEIGSLQSLEILSVRNNQL 493

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
            +L  SL        LK L          + ST K   +       +  KEL  +   LS
Sbjct: 494 TSLPRSL---DLATNLKVL----------DVSTNKLQFLNCNLSPLIFLKELDCKQNMLS 540

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P+       +T++DLS N   + PP L+   SL  L +  N++    D  +  L++L 
Sbjct: 541 VLPTGWSTLSNLTRVDLSHNQFAQFPPALAELPSLAELDMEGNQLTSLVD--IGQLTALE 598

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPP-----------------FS 311
            L L++N L  +P    K +  L+ L L  N + SLPE                    FS
Sbjct: 599 RLYLNSNRLVTLPPSMGK-LRSLKYLQLRANQLTSLPEGTSCVMAGLELREADLSSNNFS 657

Query: 312 SLPH------LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTEL 365
            +P       LQ L +    + + P  I RLQ L+  +L  N L+S+  G   LT+L  L
Sbjct: 658 EMPEAILVSTLQNLSITDNVMTKLPPTITRLQSLKTCNLEGNQLESLDPGVALLTNLVHL 717

Query: 366 DLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            L  N IS +P E+  +  SLQ L L+ N L S+ +TI
Sbjct: 718 RLGYNEISTIPDEVSRMS-SLQELDLEHNRLESLPQTI 754



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 190/427 (44%), Gaps = 54/427 (12%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I     LT L  ++N L  +P  IG+L+RL  LDL  N++ ++P++I     L++ ++  
Sbjct: 408 IGHLKGLTALGLNENNLKKLPPEIGNLTRLRILDLRYNKLRTVPANIKHLTQLSKLFLRF 467

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMT 137
           N L  LP E+G L  L  L + +NQL            L VLD+S N L  L   +  + 
Sbjct: 468 NRLVELPEEIGSLQSLEILSVRNNQLTSLPRSLDLATNLKVLDVSTNKLQFLNCNLSPLI 527

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L++L    N L  L +         L    R  L  N+ ++      +L ++A      
Sbjct: 528 FLKELDCKQNMLSVLPTGW-----STLSNLTRVDLSHNQFAQFPPALAELPSLA------ 576

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             EL +EG  L+++  +I +   + +L L+ N +  LPP +    SL+ L L  N++   
Sbjct: 577 --ELDMEGNQLTSL-VDIGQLTALERLYLNSNRLVTLPPSMGKLRSLKYLQLRANQLTSL 633

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP------MLQILDLSYNIAS-LPENPPF 310
           P+     ++ L   + D      + S+ F ++P       LQ L ++ N+ + LP  P  
Sbjct: 634 PEGTSCVMAGLELREAD------LSSNNFSEMPEAILVSTLQNLSITDNVMTKLP--PTI 685

Query: 311 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
           + L  L+   L   QL      +  L  L  L L  N + +IP+    ++SL ELDL  N
Sbjct: 686 TRLQSLKTCNLEGNQLESLDPGVALLTNLVHLRLGYNEISTIPDEVSRMSSLQELDLEHN 745

Query: 371 NISALPPELG----------------------LLEPSLQALRLDGNPLRSIRRTILDRGT 408
            + +LP  +G                      +L   L  L++DGNP+++I     D+G 
Sbjct: 746 RLESLPQTIGGMLALSLLVLNDNLLDDLPNELVLLDKLTELKVDGNPMKNIPDA--DQGG 803

Query: 409 KAVLKYL 415
            AV  +L
Sbjct: 804 NAVFHFL 810



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 115/284 (40%), Gaps = 63/284 (22%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++LD+EGN+LT L +  I   T L  L  + N L  +P ++G L  L  L L  N++ S
Sbjct: 575 LAELDMEGNQLTSLVD--IGQLTALERLYLNSNRLVTLPPSMGKLRSLKYLQLRANQLTS 632

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P   S  C +A                    +L   DL SN   E         L  L 
Sbjct: 633 LPEGTS--CVMAGL------------------ELREADLSSNNFSEMPEAILVSTLQNLS 672

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSE 179
           +++N ++ LPP I ++ +L+   L GN L +L       P  ALL  L   RL  NE   
Sbjct: 673 ITDNVMTKLPPTITRLQSLKTCNLEGNQLESL------DPGVALLTNLVHLRLGYNE--- 723

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                       +S IP E+     + +LDL  N ++ LP  + 
Sbjct: 724 ----------------------------ISTIPDEVSRMSSLQELDLEHNRLESLPQTIG 755

Query: 240 SC-ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
              A    ++          + +L  L  L+ LK+D NP++ +P
Sbjct: 756 GMLALSLLVLNDNLLDDLPNELVL--LDKLTELKVDGNPMKNIP 797


>gi|60327196|gb|AAX19021.1| Cf-2.3 [Solanum pimpinellifolium]
          Length = 1112

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 184/407 (45%), Gaps = 52/407 (12%)

Query: 29  IASKNLLNGMPETIGSLSRLIRLDLHQNRILS-------------------------IPS 63
           ++  N+   +P  IG+L+ L+ LDL+ N+I                           IP 
Sbjct: 102 LSKNNIYGTIPPEIGNLTNLVYLDLNNNQISGTIPPQIGLLAKLQIIRIFHNQLNGFIPK 161

Query: 64  SISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYC-VEACQLR-LSVLD 120
            I    SL +  +G N LS  +PA +G L+ L  L L++NQL      E   LR L+ LD
Sbjct: 162 EIGYLRSLTKLSLGINFLSGSIPASVGNLNNLSFLYLYNNQLSGSIPEEISYLRSLTELD 221

Query: 121 LSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPEN 175
           LS+N+L+G +P  +G M  L  L L GN L         G  P  + YLRS     L EN
Sbjct: 222 LSDNALNGSIPASLGNMNNLSFLFLYGNQLS--------GSIPEEICYLRSLTYLDLSEN 273

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-EL 234
             + +       +   + L +   +LS       +IP EI     +  L LS N++   +
Sbjct: 274 ALNGSIPASLGNLNNLSFLFLYGNQLS------GSIPEEIGYLRSLNVLGLSENALNGSI 327

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P  L +  +L  L L  N++     A L +L++LS L L NN L         ++  L +
Sbjct: 328 PASLGNLKNLSRLNLVNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSM 387

Query: 295 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQS-I 352
           L L  N  S        +L +L  LYL   QL  + P +I  L  L  LDLS NS+   I
Sbjct: 388 LYLYNNQLSGSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLSSLTYLDLSNNSINGFI 447

Query: 353 PEGFKNLTSLTELDLSDNNI-SALPPELGLLEPSLQALRLDGNPLRS 398
           P  F N+++L  L L +N + S++P E+G L  SL  L L  N L  
Sbjct: 448 PASFGNMSNLAFLFLYENQLASSVPEEIGYLR-SLNVLDLSENALNG 493



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 195/449 (43%), Gaps = 87/449 (19%)

Query: 25  LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNAL- 81
           L+ L    N L+G +PE IG LS L  LDL  N I   IP+S     +LA  ++  N L 
Sbjct: 409 LSRLYLYNNQLSGSIPEEIGYLSSLTYLDLSNNSINGFIPASFGNMSNLAFLFLYENQLA 468

Query: 82  SALPAELGKLSKLGTLDLHSNQLKEYC-------------------------VEACQLR- 115
           S++P E+G L  L  LDL  N L                              E   LR 
Sbjct: 469 SSVPEEIGYLRSLNVLDLSENALNGSIPASFGNLNNLSRLNLVNNQLSGSIPEEIGYLRS 528

Query: 116 LSVLDLSNNSLSG-------------------------LPPEIGKMTTLRKLLLTGNPLR 150
           L+VLDLS N+L+G                         +P EIG + +L  L L+ N L 
Sbjct: 529 LNVLDLSENALNGSIPASFGNLNNLSRLNLVNNQLSGSIPEEIGYLRSLNDLGLSENAL- 587

Query: 151 TLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
                  NG  PA L  L +     L  N+ S +   +   ++  T LS+ +   SL G+
Sbjct: 588 -------NGSIPASLGNLNNLSMLYLYNNQLSGSIPEEIGYLSSLTYLSLGNN--SLNGL 638

Query: 207 NLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 265
               IP+       +  L L+ N+ I E+P  + +  SL+ L + RN +K      L ++
Sbjct: 639 ----IPASFGNMRNLQALILNDNNLIGEIPSSVCNLTSLEVLYMPRNNLKGKVPQCLGNI 694

Query: 266 SSLSCLKLDNNPLR-QVPSDGFKDIPMLQILDLSYNI--ASLPENPPFSSLPHLQELYLR 322
           S+L  L + +N    ++PS    ++  LQILD   N    ++P+   F ++  L+   ++
Sbjct: 695 SNLQVLSMSSNSFSGELPSS-ISNLTSLQILDFGRNNLEGAIPQ--CFGNISSLEVFDMQ 751

Query: 323 RMQLREA-PTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNIS-ALPPEL 379
             +L    PT+      L  L+L  N L+  IP    N   L  LDL DN ++   P  L
Sbjct: 752 NNKLSGTLPTNFSIGCSLISLNLHGNELEDEIPRSLDNCKKLQVLDLGDNQLNDTFPMWL 811

Query: 380 GLLEPSLQALRLDGN----PLRSIRRTIL 404
           G L P L+ LRL  N    P+RS R  I+
Sbjct: 812 GTL-PELRVLRLTSNKLHGPIRSSRAEIM 839



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 147/341 (43%), Gaps = 52/341 (15%)

Query: 25  LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALS 82
           L  L  S N  +G +P +I +L+ L  LD  +N +  +IP       SL  F M NN LS
Sbjct: 697 LQVLSMSSNSFSGELPSSISNLTSLQILDFGRNNLEGAIPQCFGNISSLEVFDMQNNKLS 756

Query: 83  A-LPAELGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLDLSNNSLSG-LPPEIGKMT 137
             LP        L +L+LH N+L++     ++ C+ +L VLDL +N L+   P  +G + 
Sbjct: 757 GTLPTNFSIGCSLISLNLHGNELEDEIPRSLDNCK-KLQVLDLGDNQLNDTFPMWLGTLP 815

Query: 138 TLRKLLLTGNPLRT-LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
            LR L LT N L   +RSS      P L     SR   ++D   S   E L  M T +  
Sbjct: 816 ELRVLRLTSNKLHGPIRSSRAEIMFPDLRIIDLSRNAFSQDLPTSLF-EHLKGMRT-VDK 873

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIK 255
           T +E S E     ++         +TK          L  E+    SL T+I LS NK +
Sbjct: 874 TMEEPSYESYYDDSVVV-------VTK---------GLELEIVRILSLYTVIDLSSNKFE 917

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 315
               ++L  L ++  L + +N L+         + +L+ LDLS+N  S            
Sbjct: 918 GHIPSVLGDLIAIRILNVSHNALQGYIPSSLGSLSILESLDLSFNQLS------------ 965

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS-IPEG 355
                       E P  +  L  L  L+LS N LQ  IP+G
Sbjct: 966 -----------GEIPQQLASLTFLEFLNLSHNYLQGCIPQG 995



 Score = 45.4 bits (106), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 87/183 (47%), Gaps = 35/183 (19%)

Query: 221 ITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
           +  LDLS+N+I   +PPE+ +  +L  L L+ N+I       +  L+ L  +++ +N L 
Sbjct: 97  LENLDLSKNNIYGTIPPEIGNLTNLVYLDLNNNQISGTIPPQIGLLAKLQIIRIFHNQL- 155

Query: 280 QVPSDGF--KDIPMLQIL-DLSYNIASLPENPPFS--SLPHLQELYLRRMQLREAPTDIL 334
               +GF  K+I  L+ L  LS  I  L  + P S  +L +L  LYL   QL        
Sbjct: 156 ----NGFIPKEIGYLRSLTKLSLGINFLSGSIPASVGNLNNLSFLYLYNNQLS------- 204

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDG 393
                           SIPE    L SLTELDLSDN ++  +P  LG +  +L  L L G
Sbjct: 205 ---------------GSIPEEISYLRSLTELDLSDNALNGSIPASLGNMN-NLSFLFLYG 248

Query: 394 NPL 396
           N L
Sbjct: 249 NQL 251


>gi|148921661|gb|AAI46714.1| Zgc:152984 protein [Danio rerio]
          Length = 636

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 180/379 (47%), Gaps = 45/379 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I S  + L  L L  N+I  +P  +  C  L    + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFSYEKTLEELYLDANQIEELPKQLFNCQLLYRLSLPDNDLTV 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLP----------- 130
           LP  +  L  L  LD+  N ++E+   ++ C++ L++++ S N +S LP           
Sbjct: 84  LPPGIANLINLRELDVSKNGIQEFPENIKNCKV-LAIVEASVNPISKLPEGFTQLLSLSQ 142

Query: 131 ------------PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
                          G++T L+ L L  N L+ L  S+       L +  R  L  NE +
Sbjct: 143 LYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSM-----HKLTQLERLDLGSNEFT 197

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           E     E L  +        +EL ++G  L+ +P  I    +++ LD+S+N+++ +  ++
Sbjct: 198 EVPEVLEQLTGI--------RELWMDGNKLTFVPGMIGALKQLSYLDVSKNNVEMVEEQI 249

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           S C +LQ L+LS N +   P +I  SL  LS LK+D+N L  +P D    +  L  LD S
Sbjct: 250 SGCENLQDLLLSNNALTQLPGSI-GSLKKLSTLKVDDNQLMYLP-DTIGGLSHLDELDCS 307

Query: 299 YN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
           +N I +LP +       +L+        L + P ++  L+ + +L L  N L+++PE   
Sbjct: 308 FNEIEALPSS--IGQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKLENLPEEMG 365

Query: 358 NLTSLTELDLSDNNISALP 376
           ++  L  ++LSDN +  LP
Sbjct: 366 DMQKLKVINLSDNKLRNLP 384



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 173/379 (45%), Gaps = 43/379 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L +  N LTVL    IA+   L EL  SKN +   PE I +   L  ++   N I  
Sbjct: 71  LYRLSLPDNDLTVLPPG-IANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISK 129

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P   +   SL++ Y+ +  L  LPA  G+L+KL  L+L  NQLK       +L +L  L
Sbjct: 130 LPEGFTQLLSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMHKLTQLERL 189

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL +N  + +P  + ++T +R+L + GN L     + V G                    
Sbjct: 190 DLGSNEFTEVPEVLEQLTGIRELWMDGNKL-----TFVPG-------------------- 224

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                  +I    +LS     L +   N+  +  +I     +  L LS N++ +LP  + 
Sbjct: 225 -------MIGALKQLSY----LDVSKNNVEMVEEQISGCENLQDLLLSNNALTQLPGSIG 273

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           S   L TL +  N++   PD I   LS L  L    N +  +PS        L+     +
Sbjct: 274 SLKKLSTLKVDDNQLMYLPDTI-GGLSHLDELDCSFNEIEALPS-SIGQCVNLRTFAADH 331

Query: 300 N-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           N +A +P  P   SL ++  L+L   +L   P ++  +Q+L++++LS N L+++P  F  
Sbjct: 332 NLLAQMP--PEMGSLKNVTVLFLHSNKLENLPEEMGDMQKLKVINLSDNKLRNLPYSFTK 389

Query: 359 LTSLTELDLSDNNISALPP 377
           L  +T + LS+N    L P
Sbjct: 390 LNQMTAMWLSENQSKPLIP 408



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 137/304 (45%), Gaps = 20/304 (6%)

Query: 80  ALSALPAELGKLSK-LGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKM 136
           +L  +P E+    K L  L L +NQ++E   +   CQL L  L L +N L+ LPP I  +
Sbjct: 33  SLEQVPKEIFSYEKTLEELYLDANQIEELPKQLFNCQL-LYRLSLPDNDLTVLPPGIANL 91

Query: 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
             LR+L ++ N ++    ++ N    A++             EAS      +       +
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLAIV-------------EASVNPISKLPEGFTQLL 138

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
           +  +L L    L  +P+      ++  L+L  N ++ LP  +     L+ L L  N+  +
Sbjct: 139 SLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMHKLTQLERLDLGSNEFTE 198

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 316
            P+ +L  L+ +  L +D N L  VP      +  L  LD+S N   + E    S   +L
Sbjct: 199 VPE-VLEQLTGIRELWMDGNKLTFVPG-MIGALKQLSYLDVSKNNVEMVEEQ-ISGCENL 255

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           Q+L L    L + P  I  L++L  L +  N L  +P+    L+ L ELD S N I ALP
Sbjct: 256 QDLLLSNNALTQLPGSIGSLKKLSTLKVDDNQLMYLPDTIGGLSHLDELDCSFNEIEALP 315

Query: 377 PELG 380
             +G
Sbjct: 316 SSIG 319



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 135/320 (42%), Gaps = 64/320 (20%)

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           C+   +  ++ LD S+ SL  +P EI     TL +L L  N +  L   L N      L 
Sbjct: 16  CLRGEEETVTTLDYSHCSLEQVPKEIFSYEKTLEELYLDANQIEELPKQLFN----CQLL 71

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
           Y R  LP+N+                               L+ +P  I     + +LD+
Sbjct: 72  Y-RLSLPDND-------------------------------LTVLPPGIANLINLRELDV 99

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPD----------------------AILTS 264
           S+N IQE P  + +C  L  +  S N I   P+                      A    
Sbjct: 100 SKNGIQEFPENIKNCKVLAIVEASVNPISKLPEGFTQLLSLSQLYLNDAFLEFLPASFGR 159

Query: 265 LSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRR 323
           L+ L  L+L  N L+ +P    K +  L+ LDL  N    +PE      L  ++EL++  
Sbjct: 160 LTKLQILELRENQLKMLPKSMHK-LTQLERLDLGSNEFTEVPE--VLEQLTGIRELWMDG 216

Query: 324 MQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
            +L   P  I  L+QL  LD+S+N+++ + E      +L +L LS+N ++ LP  +G L+
Sbjct: 217 NKLTFVPGMIGALKQLSYLDVSKNNVEMVEEQISGCENLQDLLLSNNALTQLPGSIGSLK 276

Query: 384 PSLQALRLDGNPLRSIRRTI 403
             L  L++D N L  +  TI
Sbjct: 277 -KLSTLKVDDNQLMYLPDTI 295


>gi|194753275|ref|XP_001958942.1| GF12306 [Drosophila ananassae]
 gi|190620240|gb|EDV35764.1| GF12306 [Drosophila ananassae]
          Length = 860

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 164/376 (43%), Gaps = 50/376 (13%)

Query: 11  LTVLSNNL------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 64
           L V SNNL      I S   L  L  ++NL+  +P+ I S   L  LDL  N +  +P +
Sbjct: 69  LHVNSNNLESIPQAIGSLRQLQHLDLNRNLIVTVPDEIKSCKHLTHLDLSCNSLQRLPDA 128

Query: 65  ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 123
           I+   SL E  +    L  LPA  G+L  L  L+L  N L        +L  L  LD+  
Sbjct: 129 ITSLISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGG 188

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N  + LP  +G++ +L++L +  N +R + +++              +L E +  EA+  
Sbjct: 189 NEFTELPEVVGELKSLKELWIDFNQIRRVSANI-------------GKLRELQHFEANGN 235

Query: 184 KEDLITMATRLS--VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
             D  T+   LS     + LS+   NL A P  +     +       N + ELP  +S  
Sbjct: 236 LLD--TLPNELSNWRNVEVLSICSNNLEAFPFSVGMLKSLVTFKCESNGLTELPDSISYL 293

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
             L+ L+LS NK+   P  I   L SL  L  D+N LRQ+P D       L +L ++ N 
Sbjct: 294 EQLEELVLSHNKLIRLPSTI-GMLRSLRFLFADDNQLRQLP-DELCSCQQLSVLSVASN- 350

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
                                  QL   P +I  L +LR+L++  N + ++P    NL +
Sbjct: 351 -----------------------QLSALPQNIGNLAKLRVLNVVNNYINALPVSMLNLVN 387

Query: 362 LTELDLSDNNISALPP 377
           LT L LSDN    L P
Sbjct: 388 LTSLWLSDNQSQPLVP 403



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 101/192 (52%), Gaps = 7/192 (3%)

Query: 214 EIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
           E+W+    + +L LS   +Q LPP+L  C  L+ L ++ N ++  P AI  SL  L  L 
Sbjct: 35  EVWQHERTLEELYLSTTRLQTLPPQLFYCQGLRVLHVNSNNLESIPQAI-GSLRQLQHLD 93

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 331
           L+ N +  VP D  K    L  LDLS N +  LP+    +SL  LQEL L    L   P 
Sbjct: 94  LNRNLIVTVP-DEIKSCKHLTHLDLSCNSLQRLPD--AITSLISLQELLLNETYLEFLPA 150

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           +  RL  LRIL+L  N+L ++P+    L +L  LD+  N  + LP  +G L+ SL+ L +
Sbjct: 151 NFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGELK-SLKELWI 209

Query: 392 DGNPLRSIRRTI 403
           D N +R +   I
Sbjct: 210 DFNQIRRVSANI 221



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 64/129 (49%), Gaps = 2/129 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
              E N LT L ++ I+    L EL+ S N L  +P TIG L  L  L    N++  +P 
Sbjct: 276 FKCESNGLTELPDS-ISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPD 334

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            +  C  L+   + +N LSALP  +G L+KL  L++ +N +    V    L  L+ L LS
Sbjct: 335 ELCSCQQLSVLSVASNQLSALPQNIGNLAKLRVLNVVNNYINALPVSMLNLVNLTSLWLS 394

Query: 123 NNSLSGLPP 131
           +N    L P
Sbjct: 395 DNQSQPLVP 403


>gi|440896879|gb|ELR48687.1| Malignant fibrous histiocytoma-amplified sequence 1, partial [Bos
           grunniens mutus]
          Length = 997

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 167/348 (47%), Gaps = 25/348 (7%)

Query: 76  MGNNALSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPE 132
           +GNN L  +P  LG  L  L  L L  N+  +      +L   L+ LD+S+N LS L  E
Sbjct: 22  LGNNGLEEVPDGLGSALGSLRVLILRRNRFAQLPQAVAELGHHLTELDVSHNRLSVLGAE 81

Query: 133 -IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 191
            +G +  LRKL L+ N L  L + L        L    +RL    DS A  ++       
Sbjct: 82  AVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSCAGLSR------- 134

Query: 192 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 251
                  + L ++   L+A P ++ +   + +LD+S N ++ LP ++S+  +L+ L LS 
Sbjct: 135 ------LRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSG 188

Query: 252 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFS 311
            ++   P      L+SL  L LDNN LR +P+  F  +  L++L+LS N+    E  P +
Sbjct: 189 AELGTLPSG-FCELASLESLMLDNNGLRALPAQ-FSRLQRLKMLNLSSNLL---EEFPAA 243

Query: 312 SLP--HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
            LP   L+ELYL R QL   P+ I  L +L  L L  N ++ +P+    LT L EL L  
Sbjct: 244 LLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQG 303

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           N I+ LP   G L   +   ++  NPL      +  +G   +  Y K+
Sbjct: 304 NQIAVLPDNFGQLS-RVGLWKIKDNPLIQPPYEVCMKGIPYIAAYQKE 350



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 137/294 (46%), Gaps = 16/294 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++LDV  N+L+VL    + +   L +L  S N L  +P  +G+L  L  LD+  NR+  
Sbjct: 65  LTELDVSHNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAH 124

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P S +G   L    + +N L+A P +L +L  L  LD+ SN+L+    +   LR L +L
Sbjct: 125 LPDSCAGLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKIL 184

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            LS   L  LP    ++ +L  L+L  N LR L +               SRL   +   
Sbjct: 185 WLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQF-------------SRLQRLKMLN 231

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            S+   +    A       +EL L    L+++PS I   G +  L L  N I+ LP  + 
Sbjct: 232 LSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIV 291

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD-GFKDIPML 292
               L+ L+L  N+I   PD     LS +   K+ +NPL Q P +   K IP +
Sbjct: 292 ELTGLEELVLQGNQIAVLPDN-FGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYI 344



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 95/183 (51%), Gaps = 5/183 (2%)

Query: 219 GEITKLDLSRNSIQELPPELSSC-ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
           G+I  L+L  N ++E+P  L S   SL+ LIL RN+    P A+      L+ L + +N 
Sbjct: 15  GDIEVLNLGNNGLEEVPDGLGSALGSLRVLILRRNRFAQLPQAVAELGHHLTELDVSHNR 74

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
           L  + ++    +  L+ L+LS+N + +LP      +L HL+EL +   +L   P     L
Sbjct: 75  LSVLGAEAVGALRELRKLNLSHNQLPALPAQ--LGALVHLEELDVSFNRLAHLPDSCAGL 132

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            +LR LD+  N L + P     L +L ELD+S N +  LP ++  L  +L+ L L G  L
Sbjct: 133 SRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALR-ALKILWLSGAEL 191

Query: 397 RSI 399
            ++
Sbjct: 192 GTL 194



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 1/165 (0%)

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           ++   ++ L L  N +++ PD + ++L SL  L L  N   Q+P    +    L  LD+S
Sbjct: 12  ANIGDIEVLNLGNNGLEEVPDGLGSALGSLRVLILRRNRFAQLPQAVAELGHHLTELDVS 71

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           +N  S+       +L  L++L L   QL   P  +  L  L  LD+S N L  +P+    
Sbjct: 72  HNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSCAG 131

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           L+ L  LD+  N ++A P +L L   +L+ L +  N LR +   I
Sbjct: 132 LSRLRTLDVDHNQLTAFPRQL-LQLVALEELDVSSNRLRGLPEDI 175



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 10/145 (6%)

Query: 10  KLTVLSNNLIASW-------TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           K+  LS+NL+  +         L EL  S+N L  +P  I  L RL+ L L  NRI  +P
Sbjct: 228 KMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLP 287

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 122
            SI     L E  +  N ++ LP   G+LS++G   +  N L +   E C   +  +   
Sbjct: 288 DSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 347

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGN 147
              L+   P +       KLLL G 
Sbjct: 348 QKELAHSQPAVQPRL---KLLLMGQ 369


>gi|410929299|ref|XP_003978037.1| PREDICTED: protein LAP2-like [Takifugu rubripes]
          Length = 1355

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 184/400 (46%), Gaps = 62/400 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIR-LDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I S  + ++ L L  N+I  +P  +  C  L    M +N L+ 
Sbjct: 39  VTSLDYSHCSLETVPKEIFSFEKTLQELYLDANQIEELPKQLFNCQVLHRLSMPDNDLAV 98

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 99  LPAAIANLINLRELDVSKNSIQEFPENIKNCKVLAIVEASVNPISKLPEGFTQLLSLTQL 158

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  S+       L +  R  L  NE +E
Sbjct: 159 YLNDAFLEFLPASFGRLTKLQILELRENQLKVLPKSMQK-----LTQLERLDLGSNEFTE 213

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                + L  +        +EL ++G  L+ +P  + +  ++  LD+S+N+++ +  ++ 
Sbjct: 214 VPEVLDQLGGI--------RELWMDGNRLTFLPGMLGKLKQLVYLDVSKNNLEMVDEQIC 265

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C SLQ L+LS N +   P +I  SL  L+ LK+D N L  +P D    +  L  LD S+
Sbjct: 266 GCESLQDLLLSNNALTQLPGSI-GSLKKLTALKVDENQLMYLP-DSIGGLTSLDELDCSF 323

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   +  +   L+L   +L   P ++  +Q
Sbjct: 324 NEIEALPSSIGQCVGIRTFAADHNFLVQLPPEMGNWKNATVLFLHSNKLESLPEEMGDMQ 383

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L++++LS N L+++P  F  L+ +T + LS+N    L P
Sbjct: 384 KLKVINLSNNKLKNLPYSFTKLSQMTAMWLSENQSKPLIP 423



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 143/312 (45%), Gaps = 62/312 (19%)

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           C+   +  ++ LD S+ SL  +P EI     TL++L L  N +  L   L N        
Sbjct: 31  CLRGEEEAVTSLDYSHCSLETVPKEIFSFEKTLQELYLDANQIEELPKQLFN-------- 82

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
                                  +  RLS+   +L++       +P+ I     + +LD+
Sbjct: 83  ---------------------CQVLHRLSMPDNDLAV-------LPAAIANLINLRELDV 114

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S+NSIQE P  + +C  L  +  S N I   P+   T L SL+ L L++  L  +P+  F
Sbjct: 115 SKNSIQEFPENIKNCKVLAIVEASVNPISKLPEG-FTQLLSLTQLYLNDAFLEFLPA-SF 172

Query: 287 KDIPMLQILDLSYN-IASLPEN--------------PPFSSLPH-------LQELYLRRM 324
             +  LQIL+L  N +  LP++                F+ +P        ++EL++   
Sbjct: 173 GRLTKLQILELRENQLKVLPKSMQKLTQLERLDLGSNEFTEVPEVLDQLGGIRELWMDGN 232

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
           +L   P  + +L+QL  LD+S+N+L+ + E      SL +L LS+N ++ LP  +G L+ 
Sbjct: 233 RLTFLPGMLGKLKQLVYLDVSKNNLEMVDEQICGCESLQDLLLSNNALTQLPGSIGSLK- 291

Query: 385 SLQALRLDGNPL 396
            L AL++D N L
Sbjct: 292 KLTALKVDENQL 303



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 40/257 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T +   ++     + EL    N L  +P  +G L +L+ LD+ +N +  
Sbjct: 201 LERLDLGSNEFTEVPE-VLDQLGGIRELWMDGNRLTFLPGMLGKLKQLVYLDVSKNNLEM 259

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSV 118
           +   I GC SL +  + NNAL+ LP  +G L KL  L +  NQL  Y  ++      L  
Sbjct: 260 VDEQICGCESLQDLLLSNNALTQLPGSIGSLKKLTALKVDENQLM-YLPDSIGGLTSLDE 318

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           LD S N +  LP  IG+   +R      N L  L   + N     +L +L S        
Sbjct: 319 LDCSFNEIEALPSSIGQCVGIRTFAADHNFLVQLPPEMGNWKNATVL-FLHSN------- 370

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
                                        L ++P E+ +  ++  ++LS N ++ LP   
Sbjct: 371 ----------------------------KLESLPEEMGDMQKLKVINLSNNKLKNLPYSF 402

Query: 239 SSCASLQTLILSRNKIK 255
           +  + +  + LS N+ K
Sbjct: 403 TKLSQMTAMWLSENQSK 419



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 28/188 (14%)

Query: 217 EAGEITKLDLSRNSIQELPPELSSC-ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
           E   +T LD S  S++ +P E+ S   +LQ L L  N+I++ P  +  +   L  L + +
Sbjct: 35  EEEAVTSLDYSHCSLETVPKEIFSFEKTLQELYLDANQIEELPKQLF-NCQVLHRLSMPD 93

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
           N L  +P+                           ++L +L+EL + +  ++E P +I  
Sbjct: 94  NDLAVLPA-------------------------AIANLINLRELDVSKNSIQEFPENIKN 128

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
            + L I++ S N +  +PEGF  L SLT+L L+D  +  LP   G L   LQ L L  N 
Sbjct: 129 CKVLAIVEASVNPISKLPEGFTQLLSLTQLYLNDAFLEFLPASFGRLT-KLQILELRENQ 187

Query: 396 LRSIRRTI 403
           L+ + +++
Sbjct: 188 LKVLPKSM 195


>gi|387016666|gb|AFJ50452.1| Protein LAP2 [Crotalus adamanteus]
          Length = 1450

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 186/410 (45%), Gaps = 62/410 (15%)

Query: 25  LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLYKLSLPDNDLTT 83

Query: 84  LPAELGKLSKLGTLDLHSNQLKEY--CVEACQ----------------------LRLSVL 119
           LPA +  L  L  LD+  N ++E+   ++ C+                      L L+ L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L++  L  LP   G++T L+ L L  N L+ L  ++       L +  R  L  NE +E
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNR-----LTQLERLDLGSNEFTE 198

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                E L  +        KE  ++   L+ +P  +     +T LD+S+N+I+ L   +S
Sbjct: 199 VPEVLEQLSGL--------KEFWMDDNKLTLVPGFMGSLKHLTYLDISKNNIETLEEGVS 250

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
            C SLQ L+LS N ++  P++I   L  L+ LK+D N L  +P D    +  ++ LD S+
Sbjct: 251 GCESLQDLLLSSNSLQQLPESI-GCLKKLTVLKIDENQLMYLP-DSIGGLIAIEELDCSF 308

Query: 300 N-IASLPEN---------------------PPFSSLPHLQELYLRRMQLREAPTDILRLQ 337
           N I +LP +                     P   +  ++  L+L   +L   P ++  +Q
Sbjct: 309 NEIETLPSSIGQLSNIRTFAADHNFLTQLPPEIGNWKYVTVLFLHSNKLEVLPEEMGDMQ 368

Query: 338 QLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
           +L++++LS N L+ +P     L  LT L LSDN    L P    ++P  Q
Sbjct: 369 KLKVINLSDNRLKYLPYSILQLQHLTALWLSDNQSKPLIPLQKEVDPETQ 418



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 4/154 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ T +   ++   + L E     N L  +P  +GSL  L  LD+ +N I +
Sbjct: 186 LERLDLGSNEFTEVPE-VLEQLSGLKEFWMDDNKLTLVPGFMGSLKHLTYLDISKNNIET 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSV 118
           +   +SGC SL +  + +N+L  LP  +G L KL  L +  NQL  Y  ++    + +  
Sbjct: 245 LEEGVSGCESLQDLLLSSNSLQQLPESIGCLKKLTVLKIDENQLM-YLPDSIGGLIAIEE 303

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           LD S N +  LP  IG+++ +R      N L  L
Sbjct: 304 LDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQL 337



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 9/114 (7%)

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY---LR 322
           +++ L   +  L QVP + F     L+ L L  N I  LP+      L + Q LY   L 
Sbjct: 23  TVTALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPK-----QLFNCQSLYKLSLP 77

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
              L   P  I  L  LR LD+S+N +Q  PE  KN   L  ++ S N IS LP
Sbjct: 78  DNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLP 131


>gi|242074072|ref|XP_002446972.1| hypothetical protein SORBIDRAFT_06g026090 [Sorghum bicolor]
 gi|241938155|gb|EES11300.1| hypothetical protein SORBIDRAFT_06g026090 [Sorghum bicolor]
          Length = 1164

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 175/388 (45%), Gaps = 21/388 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-I 61
           LD+ GN  T      +   T L EL    N  +G +P  IG    L  LDL  N     +
Sbjct: 355 LDLSGNAFTGELPPAVGQLTALLELRLGGNAFSGAVPAEIGRCGALQVLDLEDNHFTGDV 414

Query: 62  PSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQL-KEYCVEACQL-RLSV 118
           PSS+ G   L E Y+G N  S  +PA  G LS L  L +  N+L      E  +L  L+ 
Sbjct: 415 PSSLGGLPRLREAYLGGNTFSGQIPASFGNLSWLEALSIQRNRLTGRLSGELFRLGNLTF 474

Query: 119 LDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
           LDLS N+L+G +PP IG +  L+ L L+GN       + +       L+ LR      + 
Sbjct: 475 LDLSENNLTGEIPPAIGNLLALQSLNLSGNAFSGHIPTTIGN-----LQNLRVLDLSGQK 529

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-ELPP 236
           + +     +L  +     V+  + S  G ++    S +W    +  L+LS NS    +P 
Sbjct: 530 NLSGNVPAELFGLPQLQYVSFADNSFSG-DVPEGFSSLWS---LRNLNLSGNSFTGSIPA 585

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR-QVPSDGFKDIPMLQIL 295
                 SLQ L  S N I     A L + S+L+ L+L  N L   +PSD    +  L+ L
Sbjct: 586 TYGYLPSLQVLSASHNHISGELPAELANCSNLTVLELSGNQLTGSIPSD-LSRLDELEEL 644

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQL-REAPTDILRLQQLRILDLSQNSL-QSIP 353
           DLSYN  S    P  S+   L  L L    +  + P  +  L +L+ LDLS N+L  SIP
Sbjct: 645 DLSYNQLSGKIPPEISNCSSLALLKLDDNHIGGDIPASLANLSKLQTLDLSSNNLTGSIP 704

Query: 354 EGFKNLTSLTELDLSDNNISA-LPPELG 380
                +  L   ++S N +S  +P  LG
Sbjct: 705 ASLAQIPGLLSFNVSHNELSGEIPAMLG 732



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 177/427 (41%), Gaps = 76/427 (17%)

Query: 41  TIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALSA-LPAE-LGKLSKLGTL 97
            +GSL  L RL L  N +  +IP+S++   SL   ++ +N+LS  +P   L  L+ L T 
Sbjct: 103 ALGSLPYLERLSLRSNDLSGAIPASLARVTSLRAVFLQSNSLSGPIPQSFLANLTNLDTF 162

Query: 98  DLHSNQLKEYCVEACQLRLSVLDLSNNSLSG--------------------------LPP 131
           D+  N L      +    L  LDLS+N+ SG                          +P 
Sbjct: 163 DVSGNLLSGPVPVSFPPSLKYLDLSSNAFSGTIPANISASTANLQFLNLSFNRLRGTVPA 222

Query: 132 EIGKMTTLRKLLLTGNPLR-TLRSSLVNG------------------------PTPALLK 166
            +G +  L  L L GN L  T+ ++L N                         PT  +L 
Sbjct: 223 SLGNLQNLHYLWLDGNLLEGTIPAALANCSALLHLSLQGNSLRGILPSAVAAIPTLQILS 282

Query: 167 YLRSRLPENEDSEASTTKED--------------LITMATRLSVTSKELSLEGMNLSA-I 211
             R++L     + A   + +               + +   L+   + + L G  L+   
Sbjct: 283 VSRNQLTGTIPAAAFGAQGNSSLRIVQLGGNEFSQVDVPGALAADLQVVDLGGNKLAGPF 342

Query: 212 PSEIWEAGEITKLDLSRNSI-QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           P+ +  AG +T LDLS N+   ELPP +    +L  L L  N       A +    +L  
Sbjct: 343 PTWLAGAGGLTLLDLSGNAFTGELPPAVGQLTALLELRLGGNAFSGAVPAEIGRCGALQV 402

Query: 271 LKL-DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-E 328
           L L DN+    VPS     +P L+   L  N  S      F +L  L+ L ++R +L   
Sbjct: 403 LDLEDNHFTGDVPSS-LGGLPRLREAYLGGNTFSGQIPASFGNLSWLEALSIQRNRLTGR 461

Query: 329 APTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSL 386
              ++ RL  L  LDLS+N+L   IP    NL +L  L+LS N  S  +P  +G L+ +L
Sbjct: 462 LSGELFRLGNLTFLDLSENNLTGEIPPAIGNLLALQSLNLSGNAFSGHIPTTIGNLQ-NL 520

Query: 387 QALRLDG 393
           + L L G
Sbjct: 521 RVLDLSG 527



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 171/433 (39%), Gaps = 51/433 (11%)

Query: 1   MSKLDVEGNKLT-VLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI 58
           +  LD+  N  +  +  N+ AS   L  L  S N L G +P ++G+L  L  L L  N +
Sbjct: 181 LKYLDLSSNAFSGTIPANISASTANLQFLNLSFNRLRGTVPASLGNLQNLHYLWLDGNLL 240

Query: 59  -LSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEAC---- 112
             +IP++++ C +L    +  N+L   LP+ +  +  L  L +  NQL      A     
Sbjct: 241 EGTIPAALANCSALLHLSLQGNSLRGILPSAVAAIPTLQILSVSRNQLTGTIPAAAFGAQ 300

Query: 113 -QLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 171
               L ++ L  N  S +         L+ + L GN L         GP P  L      
Sbjct: 301 GNSSLRIVQLGGNEFSQVDVPGALAADLQVVDLGGNKLA--------GPFPTWLAGAGGL 352

Query: 172 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS-AIPSEIWEAGEITKLDLSRNS 230
              +    A T   +L     +L+    EL L G   S A+P+EI   G +  LDL  N 
Sbjct: 353 TLLDLSGNAFTG--ELPPAVGQLTAL-LELRLGGNAFSGAVPAEIGRCGALQVLDLEDNH 409

Query: 231 IQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
              ++P  L     L+   L  N       A   +LS L  L +  N L    S     +
Sbjct: 410 FTGDVPSSLGGLPRLREAYLGGNTFSGQIPASFGNLSWLEALSIQRNRLTGRLSGELFRL 469

Query: 290 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLS--- 345
             L  LDLS N  +    P   +L  LQ L L         PT I  LQ LR+LDLS   
Sbjct: 470 GNLTFLDLSENNLTGEIPPAIGNLLALQSLNLSGNAFSGHIPTTIGNLQNLRVLDLSGQK 529

Query: 346 ----------------------QNSLQS-IPEGFKNLTSLTELDLSDNNISA-LPPELGL 381
                                  NS    +PEGF +L SL  L+LS N+ +  +P   G 
Sbjct: 530 NLSGNVPAELFGLPQLQYVSFADNSFSGDVPEGFSSLWSLRNLNLSGNSFTGSIPATYGY 589

Query: 382 LEPSLQALRLDGN 394
           L PSLQ L    N
Sbjct: 590 L-PSLQVLSASHN 601



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 83/182 (45%), Gaps = 9/182 (4%)

Query: 221 ITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKD-WPDAILTSLSSLSCLKLDNNPL 278
           + +L L  N +   +P  L+   SL+ + L  N +    P + L +L++L    +  N L
Sbjct: 110 LERLSLRSNDLSGAIPASLARVTSLRAVFLQSNSLSGPIPQSFLANLTNLDTFDVSGNLL 169

Query: 279 RQVPSDGFKDIPMLQILDLSYNI--ASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILR 335
                  F   P L+ LDLS N    ++P N   +S  +LQ L L   +LR   P  +  
Sbjct: 170 SGPVPVSFP--PSLKYLDLSSNAFSGTIPANIS-ASTANLQFLNLSFNRLRGTVPASLGN 226

Query: 336 LQQLRILDLSQNSLQ-SIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           LQ L  L L  N L+ +IP    N ++L  L L  N++  + P      P+LQ L +  N
Sbjct: 227 LQNLHYLWLDGNLLEGTIPAALANCSALLHLSLQGNSLRGILPSAVAAIPTLQILSVSRN 286

Query: 395 PL 396
            L
Sbjct: 287 QL 288


>gi|335295357|ref|XP_003130183.2| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Sus scrofa]
          Length = 855

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 192/404 (47%), Gaps = 47/404 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           M +L +  NKL V+S+  I ++  L  L+  KNLL  +PE I     L  L L  N++  
Sbjct: 347 MKELQLTDNKLEVISHK-IENFRELRILVLDKNLLKDVPENISHCVMLEFLSLSDNKLTE 405

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P +I    +L + ++  N +  +P ++  L+ + +L+   N + ++ +E    R ++ +
Sbjct: 406 LPKNIHKLKNLRKLHINRNNIIKIPEDISHLNNMFSLEFAGNIITDFPIEIKNCRKITKV 465

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           +LS N +   P  +  + +L  L   GN +                    S +PE    +
Sbjct: 466 ELSYNKIIYFPLGLCALESLYYLSFNGNYI--------------------SEIPE----D 501

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
            S +K+ L      L     +L +   +L ++ +       +  LDL +N I+++PP +S
Sbjct: 502 ISFSKQLL-----HLEFNENKLLIFSEHLCSLIN-------LEYLDLGKNKIKKIPPSIS 549

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
           +  SL  LIL  NK++ +P  + T L +L  L L  N ++ +P +   ++  +Q L++S 
Sbjct: 550 NMVSLHVLILCCNKLETFPIEVCT-LENLQVLDLSENQIQNIPPE-ICNLKGIQKLNISS 607

Query: 300 N-IASLPENPPFSSLPHLQELYLRRM---QLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           N     P       L  L+EL + ++   +L   P ++  + QL+ LD+S N+++ +P  
Sbjct: 608 NQFIYFP--IELCQLQSLEELNISQINGRKLTRLPEELCNMIQLKELDISNNAIREMPRS 665

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
              L SL  L   +N I  LPP    L  +LQ L L GN L ++
Sbjct: 666 IGELRSLVSLKAYNNQIRYLPPSXLSLN-ALQQLNLSGNNLTAL 708



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 185/376 (49%), Gaps = 23/376 (6%)

Query: 31  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 90
           +KN L  +P+T+ SL +L  L+L  N++   P ++     L    +  N +S+LP E+ +
Sbjct: 261 AKNKLRHIPDTLSSLKKLRGLNLEYNQLTIFPKALCFLPKLISLNLTGNLISSLPKEIKE 320

Query: 91  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
           L  L  L L  N+L    VE  +L R+  L L++N L  +  +I     LR L+L  N L
Sbjct: 321 LKNLEKLLLDHNKLTFLAVEIFRLLRMKELQLTDNKLEVISHKIENFRELRILVLDKNLL 380

Query: 150 RTLRSSLVNGPTPALLKYLR------SRLPENEDS-----EASTTKEDLITMATRLSVTS 198
           + +  ++ +     +L++L       + LP+N        +    + ++I +   +S  +
Sbjct: 381 KDVPENISHC---VMLEFLSLSDNKLTELPKNIHKLKNLRKLHINRNNIIKIPEDISHLN 437

Query: 199 KELSLE--GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
              SLE  G  ++  P EI    +ITK++LS N I   P  L +  SL  L  + N I +
Sbjct: 438 NMFSLEFAGNIITDFPIEIKNCRKITKVELSYNKIIYFPLGLCALESLYYLSFNGNYISE 497

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPH 315
            P+ I  S   L  L+ + N L  + S+    +  L+ LDL  N I  +P  P  S++  
Sbjct: 498 IPEDISFS-KQLLHLEFNENKLL-IFSEHLCSLINLEYLDLGKNKIKKIP--PSISNMVS 553

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           L  L L   +L   P ++  L+ L++LDLS+N +Q+IP    NL  + +L++S N     
Sbjct: 554 LHVLILCCNKLETFPIEVCTLENLQVLDLSENQIQNIPPEICNLKGIQKLNISSNQFIYF 613

Query: 376 PPELGLLEPSLQALRL 391
           P EL  L+ SL+ L +
Sbjct: 614 PIELCQLQ-SLEELNI 628



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 124/280 (44%), Gaps = 36/280 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L   GN ++ +  ++  S  +L  L  ++N L    E + SL  L  LDL +N+I  IP 
Sbjct: 488 LSFNGNYISEIPEDISFSKQLL-HLEFNENKLLIFSEHLCSLINLEYLDLGKNKIKKIPP 546

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           SIS   SL    +  N L   P E+  L  L  LDL  NQ++    E C L+ +  L++S
Sbjct: 547 SISNMVSLHVLILCCNKLETFPIEVCTLENLQVLDLSENQIQNIPPEICNLKGIQKLNIS 606

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N     P E+ ++ +L +L +          S +NG          +RLP         
Sbjct: 607 SNQFIYFPIELCQLQSLEELNI----------SQINGRK-------LTRLP--------- 640

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
             E+L  M     +  KEL +    +  +P  I E   +  L    N I+ LPP   S  
Sbjct: 641 --EELCNM-----IQLKELDISNNAIREMPRSIGELRSLVSLKAYNNQIRYLPPSXLSLN 693

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           +LQ L LS N +   P  I  +L SL  +  D+NPL + P
Sbjct: 694 ALQQLNLSGNNLTALPSGIY-NLFSLKEINFDDNPLLRPP 732



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 25/223 (11%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           K L++    +S IP E+ + G I +L L+ N I+  P  L S  +L+ L L++NK++  P
Sbjct: 210 KTLNVSHNQISHIPKELSQLGNIRQLFLNNNCIEGSPSGLESLGNLEILNLAKNKLRHIP 269

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP--------- 308
           D  L+SL  L  L L+ N L   P      +P L  L+L+ N I+SLP+           
Sbjct: 270 DT-LSSLKKLRGLNLEYNQLTIFPK-ALCFLPKLISLNLTGNLISSLPKEIKELKNLEKL 327

Query: 309 -------PFSSLPHLQELYLRRMQLREAPTDIL-----RLQQLRILDLSQNSLQSIPEGF 356
                   F ++   + L ++ +QL +   +++       ++LRIL L +N L+ +PE  
Sbjct: 328 LLDHNKLTFLAVEIFRLLRMKELQLTDNKLEVISHKIENFRELRILVLDKNLLKDVPENI 387

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            +   L  L LSDN ++ LP  +  L+ +L+ L ++ N +  I
Sbjct: 388 SHCVMLEFLSLSDNKLTELPKNIHKLK-NLRKLHINRNNIIKI 429



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 127/295 (43%), Gaps = 54/295 (18%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++K+++  NK+      L A  + L  L  + N ++ +PE I    +L+ L+ ++N++L 
Sbjct: 462 ITKVELSYNKIIYFPLGLCALES-LYYLSFNGNYISEIPEDISFSKQLLHLEFNENKLLI 520

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
               +    +L    +G N +  +P  +  +  L  L L  N+L+ + +E C L  L VL
Sbjct: 521 FSEHLCSLINLEYLDLGKNKIKKIPPSISNMVSLHVLILCCNKLETFPIEVCTLENLQVL 580

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGN-------------PLRTLRSSLVNGPTPALLK 166
           DLS N +  +PPEI  +  ++KL ++ N              L  L  S +NG       
Sbjct: 581 DLSENQIQNIPPEICNLKGIQKLNISSNQFIYFPIELCQLQSLEELNISQINGRK----- 635

Query: 167 YLRSRLPENEDSEASTTKEDLITMATR-----------------------------LSVT 197
              +RLPE   +     + D+   A R                             LS+ 
Sbjct: 636 --LTRLPEELCNMIQLKELDISNNAIREMPRSIGELRSLVSLKAYNNQIRYLPPSXLSLN 693

Query: 198 S-KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 251
           + ++L+L G NL+A+PS I+    + +++   N +  L P +  C   Q   ++R
Sbjct: 694 ALQQLNLSGNNLTALPSGIYNLFSLKEINFDDNPL--LRPPMEICKGKQLYTIAR 746


>gi|354548679|emb|CCE45416.1| hypothetical protein CPAR2_704300 [Candida parapsilosis]
          Length = 1641

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 179/417 (42%), Gaps = 45/417 (10%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS-A 83
           L  L  S N     PE +  L +LI LDL  N +  +P S+    SL +  +  N L  A
Sbjct: 504 LVYLNLSSNYFVNYPEPVNDLDKLIELDLSYNDLSYLPESMVNLKSLQKLNLCTNKLDKA 563

Query: 84  LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           LP  L  L  L  LD+  NQ+    V      L VL  S NS+S       +M  LR L 
Sbjct: 564 LPDFLAGLQSLKRLDIRYNQIANVDVLGELPNLEVLYASRNSISAF---CDRMENLRLLH 620

Query: 144 LTGNPLRTLRS----------SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 193
              NP+  L+            L      A+      ++P  E  +    K  L+T+   
Sbjct: 621 FDKNPITELKFINQLQMLNILDLSKAKITAIPAEFMIKIPNIE--KLVLDKNHLVTLPQE 678

Query: 194 LSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 251
           L   ++   LS+   NL A+PS I     +  L+L  NSIQ LP E+ +  SL  L ++ 
Sbjct: 679 LGQLTRLSYLSIYSNNLQAVPSTIGNLSNLQYLNLHSNSIQTLPDEIWNLRSLAVLNVAS 738

Query: 252 NKIKDWPD---AILTSLSS----------------LSCLKLDNNPLRQVPSDGFKDIPML 292
           N +  +P    AI   +SS                LS L + +N L     D    +  L
Sbjct: 739 NNLTSFPKPPFAIAKRISSSNDFGELPASESIADALSVLTISDNRLNDDCFDAISFLVGL 798

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL-RLQQLRILDLSQNSLQ 350
           + L++SYN +  +PE    S +  L ELYL    L   P D L +L+ L++L ++ N L 
Sbjct: 799 KSLNMSYNDLIEIPEGS-ISRMRRLNELYLSGNDLTTLPADDLEQLKALKLLYINNNKLV 857

Query: 351 SIPEGFKNLTSLTELDLSDN----NISALPPELGL-LEPSLQALRLDGNPLRSIRRT 402
           S+P     LT+L  LD+  N    NIS  P +       +L+ L   GN    I+++
Sbjct: 858 SLPAELSKLTNLQHLDVGSNQLKYNISNWPYDWNWHWNKNLKYLNFSGNKRFEIKQS 914



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 170/401 (42%), Gaps = 69/401 (17%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL+V  N    +  + I S T LT +  S+N  +  P  +     L  L+L  N +  
Sbjct: 411 IEKLNVSENPSIYIPLDFIQSCTNLTSVNFSRNGCSKFPTNLLEAVGLTHLNLEMNFLDD 470

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P  I+   +L    + +N LS+LP   G+L  L  L+L SN    Y      L +L  L
Sbjct: 471 LPLKINSLNNLTHLKLNSNQLSSLPKSFGELKNLVYLNLSSNYFVNYPEPVNDLDKLIEL 530

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DLS N LS LP  +  + +L+KL L  N L        +   P  L  L+S         
Sbjct: 531 DLSYNDLSYLPESMVNLKSLQKLNLCTNKL--------DKALPDFLAGLQS--------- 573

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                        RL +                       +I  +D+    + ELP    
Sbjct: 574 -----------LKRLDI--------------------RYNQIANVDV----LGELP---- 594

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS- 298
              +L+ L  SRN I     A    + +L  L  D NP+ ++       + ML ILDLS 
Sbjct: 595 ---NLEVLYASRNSIS----AFCDRMENLRLLHFDKNPITELKF--INQLQMLNILDLSK 645

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
             I ++P       +P++++L L +  L   P ++ +L +L  L +  N+LQ++P    N
Sbjct: 646 AKITAIPAE-FMIKIPNIEKLVLDKNHLVTLPQELGQLTRLSYLSIYSNNLQAVPSTIGN 704

Query: 359 LTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L++L  L+L  N+I  LP E+  L  SL  L +  N L S 
Sbjct: 705 LSNLQYLNLHSNSIQTLPDEIWNLR-SLAVLNVASNNLTSF 744



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 24/263 (9%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+   K+T +    +     + +L+  KN L  +P+ +G L+RL  L ++ N + ++PS
Sbjct: 641 LDLSKAKITAIPAEFMIKIPNIEKLVLDKNHLVTLPQELGQLTRLSYLSIYSNNLQAVPS 700

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDL 121
           +I    +L    + +N++  LP E+  L  L  L++ SN L  +     A   R+S    
Sbjct: 701 TIGNLSNLQYLNLHSNSIQTLPDEIWNLRSLAVLNVASNNLTSFPKPPFAIAKRIS---- 756

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEA 180
           S+N    LP        L  L ++ N L       +     + L  L+S  +  N+  E 
Sbjct: 757 SSNDFGELPASESIADALSVLTISDNRLNDDCFDAI-----SFLVGLKSLNMSYNDLIE- 810

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK-LDLSRNSIQELPPELS 239
               E  I+   RL+    EL L G +L+ +P++  E  +  K L ++ N +  LP ELS
Sbjct: 811 --IPEGSISRMRRLN----ELYLSGNDLTTLPADDLEQLKALKLLYINNNKLVSLPAELS 864

Query: 240 SCASLQTLILSRNKIK----DWP 258
              +LQ L +  N++K    +WP
Sbjct: 865 KLTNLQHLDVGSNQLKYNISNWP 887


>gi|193786912|dbj|BAG52235.1| unnamed protein product [Homo sapiens]
          Length = 364

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 181/378 (47%), Gaps = 28/378 (7%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL  N++  IPS +    SL   Y+  N ++ +  ++  LSKL  L +  N++K+   E
Sbjct: 2   LDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAE 61

Query: 111 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT----LRSSLVNGPTPALL 165
              L  LS L L  N LS +P  + K + L +L L  N + T    L SSLV   +  L 
Sbjct: 62  IGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLA 121

Query: 166 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI-TKL 224
           +      P    S+ ST                  L++E   ++ IP  I+   ++ +KL
Sbjct: 122 RNCFQLYPVGGPSQFSTI---------------YSLNMEHNRINKIPFGIFSRAKVLSKL 166

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           ++  N +  LP +  +  S+  L L+ N++   P+ + + L SL  L L NN L+++P  
Sbjct: 167 NMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV-SGLVSLEVLILSNNLLKKLP-H 224

Query: 285 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILD 343
           G  ++  L+ LDL  N + SLP     + L  LQ+L L   QL   P  I  L  L  L 
Sbjct: 225 GLGNLRKLRELDLEENKLESLPNE--IAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLG 282

Query: 344 LSQNSLQSIPEGFKNLTSLTELDLSDN-NISALPPELGLLEPSLQALRLDGNPLRSIRRT 402
           L +N L  +PE    L +L EL L+DN N+ +LP EL L    L  + ++  PL  +   
Sbjct: 283 LGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCS-KLSIMSIENCPLSHLPPQ 341

Query: 403 ILDRGTKAVLKYLKDKIP 420
           I+  G   ++++LK + P
Sbjct: 342 IVAGGPSFIIQFLKMQGP 359



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 143/288 (49%), Gaps = 18/288 (6%)

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
           +LDL +N L  +P  + ++ +L  L L  N + T+   + N    ++L      + EN+ 
Sbjct: 1   MLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS-----IRENKI 55

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
            +      +L +++         L L    LSAIP  + +   + +L+L  N+I  LP  
Sbjct: 56  KQLPAEIGNLSSLS--------RLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPES 107

Query: 238 L-SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           L SS   L +L L+RN  + +P    +  S++  L +++N + ++P   F    +L  L+
Sbjct: 108 LLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLN 167

Query: 297 LSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEG 355
           +  N + SLP +  F +   + EL L   QL + P D+  L  L +L LS N L+ +P G
Sbjct: 168 MKDNQLTSLPLD--FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHG 225

Query: 356 FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
             NL  L ELDL +N + +LP E+  L+  LQ L L  N L ++ R I
Sbjct: 226 LGNLRKLRELDLEENKLESLPNEIAYLK-DLQKLVLTNNQLTTLPRGI 272



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 1/150 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L++E N++  +   + +   +L++L    N L  +P   G+ + ++ L+L  N++  IP 
Sbjct: 142 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 201

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
            +SG  SL    + NN L  LP  LG L KL  LDL  N+L+    E   L+ L  L L+
Sbjct: 202 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLT 261

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           NN L+ LP  IG +T L  L L  N L  L
Sbjct: 262 NNQLTTLPRGIGHLTNLTHLGLGENLLTHL 291



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 151/318 (47%), Gaps = 27/318 (8%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           ++ L +  N++T +  + I + + L+ L   +N +  +P  IG+LS L RL L  NR+ +
Sbjct: 22  LTTLYLRFNRITTVEKD-IKNLSKLSMLSIRENKIKQLPAEIGNLSSLSRLGLRYNRLSA 80

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV- 118
           IP S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++ 
Sbjct: 81  IPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIY 140

Query: 119 -LDLSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 176
            L++ +N ++ +P  I  +   L KL +  N L +L        +   L    ++L +  
Sbjct: 141 SLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIP 200

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
           +  +     +++ ++  L             L  +P  +    ++ +LDL  N ++ LP 
Sbjct: 201 EDVSGLVSLEVLILSNNL-------------LKKLPHGLGNLRKLRELDLEENKLESLPN 247

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E++    LQ L+L+ N++   P  I   L++L+ L L  N L  +P    ++I  L+ L+
Sbjct: 248 EIAYLKDLQKLVLTNNQLTTLPRGI-GHLTNLTHLGLGENLLTHLP----EEIGTLENLE 302

Query: 297 LSYNIASLPENPPFSSLP 314
             Y    L +NP   SLP
Sbjct: 303 ELY----LNDNPNLHSLP 316


>gi|402591760|gb|EJW85689.1| leucine-rich repeat-containing protein 1, partial [Wuchereria
           bancrofti]
          Length = 581

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 181/407 (44%), Gaps = 46/407 (11%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD     L  + +++  +   L E+    N +  + + +    +L  L L +N ++ +PS
Sbjct: 18  LDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEVIRLPS 77

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I+    L E  +  N +S LP E+    +L  LDL SN +        QL  ++ L L+
Sbjct: 78  DIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMTSLGLN 137

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           + SL+ +P +IG +  LR L +  N LRT+  S+       L +  R  L  NE  +   
Sbjct: 138 DISLTQMPHDIGHLRNLRSLEVRENLLRTVPPSIS-----ELNQLRRLDLGHNELDDLPN 192

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                I M   L    +EL ++  +L A+P  I +   + +LD+S N +  LP E+    
Sbjct: 193 E----IGMLENL----EELYVDQNDLEALPESIIQCRSLEQLDVSENKLMVLPDEIGDLE 244

Query: 243 SLQTLILSRNKIKDWP------DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
            L  L +++N ++  P      D +   L  LS LK D N + Q+               
Sbjct: 245 KLDDLTVAQNCLQVLPSSIGNNDIVTGRLKKLSILKADRNAITQL--------------- 289

Query: 297 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
                      P   S   L E+YL    L E P+ +  L+ LR L+L +N L+ +P   
Sbjct: 290 ----------TPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPPTI 339

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
              TSL+ L L DN I  LP E+G LE +L+ L +  N L  +  T+
Sbjct: 340 GGCTSLSVLSLRDNLIEQLPLEIGRLE-NLRVLDVCNNRLNYLPFTV 385



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 161/365 (44%), Gaps = 47/365 (12%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           IA  T L EL    N ++ +PE I +  +L  LDL  N I  +P +I+   S+    + +
Sbjct: 79  IAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMTSLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ +P ++G L  L +L++  N L+       +L +L  LDL +N L  LP EIG + 
Sbjct: 139 ISLTQMPHDIGHLRNLRSLEVRENLLRTVPPSISELNQLRRLDLGHNELDDLPNEIGMLE 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L +L +  N L  L  S++   +   L    ++L    D      K D +T+A      
Sbjct: 199 NLEELYVDQNDLEALPESIIQCRSLEQLDVSENKLMVLPDEIGDLEKLDDLTVAQNC--- 255

Query: 198 SKELSLEGMNLSAIPSEIWE----AGEITKLDL---SRNSIQELPPELSSCASLQTLILS 250
                     L  +PS I       G + KL +    RN+I +L P + SC +L  + L+
Sbjct: 256 ----------LQVLPSSIGNNDIVTGRLKKLSILKADRNAITQLTPAIGSCHALTEIYLT 305

Query: 251 RNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPF 310
            N + + P + L +L SL  L LD N L+++P                         P  
Sbjct: 306 ENLLTEIPSS-LGNLKSLRTLNLDKNQLKELP-------------------------PTI 339

Query: 311 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
                L  L LR   + + P +I RL+ LR+LD+  N L  +P     L  L  L LS+N
Sbjct: 340 GGCTSLSVLSLRDNLIEQLPLEIGRLENLRVLDVCNNRLNYLPFTVNVLFKLRALWLSEN 399

Query: 371 NISAL 375
              A+
Sbjct: 400 QSQAM 404



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 84/161 (52%), Gaps = 11/161 (6%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS-------LSRLIRLDL 53
           + +LDV  NKL VL +  I     L +L  ++N L  +P +IG+       L +L  L  
Sbjct: 223 LEQLDVSENKLMVLPDE-IGDLEKLDDLTVAQNCLQVLPSSIGNNDIVTGRLKKLSILKA 281

Query: 54  HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEA 111
            +N I  +  +I  C +L E Y+  N L+ +P+ LG L  L TL+L  NQLKE    +  
Sbjct: 282 DRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPPTIGG 341

Query: 112 CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           C   LSVL L +N +  LP EIG++  LR L +  N L  L
Sbjct: 342 CT-SLSVLSLRDNLIEQLPLEIGRLENLRVLDVCNNRLNYL 381


>gi|156400914|ref|XP_001639037.1| predicted protein [Nematostella vectensis]
 gi|156226162|gb|EDO46974.1| predicted protein [Nematostella vectensis]
          Length = 414

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 184/403 (45%), Gaps = 45/403 (11%)

Query: 1   MSKLDVEGNKLTVLSNNLIAS--WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 58
           MS L++  + LT +S++L  S     L E+    N L  +P  + +L  L  L L  N +
Sbjct: 1   MSVLELRHSNLTTVSHDLFKSKEGKALEEVYLDANQLRDLPRGLFNLQNLQVLGLSDNEL 60

Query: 59  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 117
             +PS +S   +L       N +  +P  +     L  +D   N + +     C L  L+
Sbjct: 61  TILPSVLSNLVNLRILDFSKNGIIDIPETIKHCKNLQEIDASVNPIGKIPETFCHLANLT 120

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL-RSRLPENE 176
            L L++  L  LP   G++ +LR L L  N LR L  S+      + LK L R  +  NE
Sbjct: 121 HLYLNDAFLDFLPGNFGRLISLRILELRENHLRVLPKSM------SQLKNLERLDIGNNE 174

Query: 177 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 236
            +E        + M     +   EL ++   +  +  EI     +  LD+S+N ++ LPP
Sbjct: 175 FTE--------LPMVVGCLLNLTELWMDSNAIKELRPEIGLLRRLMFLDVSKNRLEWLPP 226

Query: 237 ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
           E+ S  SL  L LS N + + P+ I  +L  L  LKL+ N L ++P+             
Sbjct: 227 EIESLQSLTDLYLSNNLLIEIPEQI-GALGKLQTLKLEENHLGELPN------------- 272

Query: 297 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF 356
              +I  L E         L+EL L   +L   P  +  L++LR+L++ +N L+SIP   
Sbjct: 273 ---SIGKLVE---------LEELILTCNELVSLPPSLGYLRKLRVLNIDENFLESIPSEL 320

Query: 357 KNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
            + T++T L L DN +  LP  +G + P LQ + L  N L  +
Sbjct: 321 GSCTAMTILSLRDNRLVHLPDSIGRM-PKLQVINLASNRLEYL 362



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 166/385 (43%), Gaps = 61/385 (15%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L +  N+LT+L + ++++   L  L  SKN +  +PETI     L  +D   N I  IP 
Sbjct: 53  LGLSDNELTILPS-VLSNLVNLRILDFSKNGIIDIPETIKHCKNLQEIDASVNPIGKIPE 111

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           +     +L   Y+ +  L  LP   G+L  L  L+L  N L+       QL+ L  LD+ 
Sbjct: 112 TFCHLANLTHLYLNDAFLDFLPGNFGRLISLRILELRENHLRVLPKSMSQLKNLERLDIG 171

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL------RSRL---- 172
           NN  + LP  +G +  L +L +  N ++ LR      P   LL+ L      ++RL    
Sbjct: 172 NNEFTELPMVVGCLLNLTELWMDSNAIKELR------PEIGLLRRLMFLDVSKNRLEWLP 225

Query: 173 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 232
           PE E  ++ T                 +L L    L  IP +I   G++  L L  N + 
Sbjct: 226 PEIESLQSLT-----------------DLYLSNNLLIEIPEQIGALGKLQTLKLEENHLG 268

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
           ELP  +     L+ LIL+ N++   P + L  L  L  L +D N L  +PS+        
Sbjct: 269 ELPNSIGKLVELEELILTCNELVSLPPS-LGYLRKLRVLNIDENFLESIPSE-------- 319

Query: 293 QILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
                              S   +  L LR  +L   P  I R+ +L++++L+ N L+ +
Sbjct: 320 -----------------LGSCTAMTILSLRDNRLVHLPDSIGRMPKLQVINLASNRLEYL 362

Query: 353 PEGFKNLTSLTELDLSDNNISALPP 377
           P  F  L SL  L LS+N    + P
Sbjct: 363 PYSFHKLVSLKALWLSENQSKPMIP 387



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 2/104 (1%)

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
           L+E+YL   QLR+ P  +  LQ L++L LS N L  +P    NL +L  LD S N I  +
Sbjct: 27  LEEVYLDANQLRDLPRGLFNLQNLQVLGLSDNELTILPSVLSNLVNLRILDFSKNGIIDI 86

Query: 376 PPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKI 419
           P  +   + +LQ +    NP+  I  T         L YL D  
Sbjct: 87  PETIKHCK-NLQEIDASVNPIGKIPETFCHLANLTHL-YLNDAF 128


>gi|256073912|ref|XP_002573271.1| shoc2 [Schistosoma mansoni]
          Length = 515

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 171/365 (46%), Gaps = 29/365 (7%)

Query: 29  IASKNLL--NGMPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALSALP 85
           +A +N L  +G+P  I  L+ L +LDL  NR+   +P+ I G  +L    +  N L+ + 
Sbjct: 132 VAQQNWLTASGIPNEITKLTNLEQLDLRYNRLDGPLPTCICGLYNLEHLLLTYNKLTHIV 191

Query: 86  AELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
            E+  L +L  L +  N +++    +     +L  LDLS N ++ LP  IGK T+LR L 
Sbjct: 192 DEIKYLKRLSVLVVSRNLIRQDLPSSIGELTKLVKLDLSFNHITFLPDSIGKCTSLRDLN 251

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L  L  S+ N      L    ++L E   S A+  K D             E ++
Sbjct: 252 LQHNQLTKLPDSIGNLVNLCRLSIKYNQLVEIPASLANCVKLD-------------EFNV 298

Query: 204 EGMNLSAIPSEIWEA-GEITKLDLSRNSIQELPP----ELSSCASLQTLILSRNKIKDWP 258
           E   LS++P+ +      +  + LSRN     P     +   C    T+ +  N+I + P
Sbjct: 299 ENNQLSSLPNNLLPCLHNLLNITLSRNYFTNFPSGDPQQFQMCY---TINMDHNEITNIP 355

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQ 317
            ++ +  S+L  L L +N L  +      ++  L  LDL  N ++ LP     + L  L+
Sbjct: 356 KSVFSLASNLIKLNLRDNALDSLIGPDLHELKTLVELDLGSNRLSELPT--EINKLVALE 413

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L L   QL   P +I +L +LRILDL  N L+S+P     LTSL EL++  N +   P 
Sbjct: 414 VLRLNYNQLTSLPDEITQLSKLRILDLESNLLESLPNDLSGLTSLQELNVLCNRLKTFPA 473

Query: 378 ELGLL 382
            +G L
Sbjct: 474 SIGQL 478



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 173/366 (47%), Gaps = 42/366 (11%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLL-NGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           NKLT + +  I     L+ L+ S+NL+   +P +IG L++L++LDL  N I  +P SI  
Sbjct: 185 NKLTHIVDE-IKYLKRLSVLVVSRNLIRQDLPSSIGELTKLVKLDLSFNHITFLPDSIGK 243

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSL 126
           C SL +  + +N L+ LP  +G L  L  L +  NQL E     A  ++L   ++ NN L
Sbjct: 244 CTSLRDLNLQHNQLTKLPDSIGNLVNLCRLSIKYNQLVEIPASLANCVKLDEFNVENNQL 303

Query: 127 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 186
           S LP  +  +  L  LL     +   R+   N P+    ++        + +E +   + 
Sbjct: 304 SSLPNNL--LPCLHNLL----NITLSRNYFTNFPSGDPQQFQMCYTINMDHNEITNIPKS 357

Query: 187 LITMATRLSVTSKELSLEGMNL-SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 245
           + ++A+ L     +L+L    L S I  ++ E   + +LDL  N + ELP E++   +L+
Sbjct: 358 VFSLASNLI----KLNLRDNALDSLIGPDLHELKTLVELDLGSNRLSELPTEINKLVALE 413

Query: 246 TLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLP 305
            L L+ N++   PD I T LS L  L L++N L  +P+D                     
Sbjct: 414 VLRLNYNQLTSLPDEI-TQLSKLRILDLESNLLESLPND--------------------- 451

Query: 306 ENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE--GFKNLTSLT 363
                S L  LQEL +   +L+  P  I +L +L+++   +N +  IP    F +L    
Sbjct: 452 ----LSGLTSLQELNVLCNRLKTFPASIGQLTKLKVIMAGENDITDIPVEIDFASLKKKK 507

Query: 364 ELDLSD 369
           E  ++D
Sbjct: 508 EHHIAD 513



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 1/108 (0%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +LD+  N+L+ L    I     L  L  + N L  +P+ I  LS+L  LDL  N + S+P
Sbjct: 391 ELDLGSNRLSELPTE-INKLVALEVLRLNYNQLTSLPDEITQLSKLRILDLESNLLESLP 449

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           + +SG  SL E  +  N L   PA +G+L+KL  +    N + +  VE
Sbjct: 450 NDLSGLTSLQELNVLCNRLKTFPASIGQLTKLKVIMAGENDITDIPVE 497


>gi|395332855|gb|EJF65233.1| adenylate cyclase-like protein [Dichomitus squalens LYAD-421 SS1]
          Length = 1495

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 213/478 (44%), Gaps = 82/478 (17%)

Query: 17  NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP-SSISGCCSLAEFY 75
           + I S + L EL  S   L  +P+++     L  LDL  NRI  +  + +     L+   
Sbjct: 250 DFIQSCSSLKELRLSHMALKKVPQSVRHCRTLEWLDLSCNRIADLEDAGLDQIPGLSHLK 309

Query: 76  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 134
           + NN +  LP    +L KLG L++ +N+ K      C+LR L  LD S NS+S LP E+G
Sbjct: 310 LENNRMENLPYYFPRLRKLGYLNISNNKFKHIPAGVCELRSLVDLDASFNSISELPEELG 369

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---------LPENEDSEASTTKE 185
           ++T L  L + GN +  +     N     +L   R+          LP+ E   A   + 
Sbjct: 370 QLTELDHLTIVGNRVAKIPEQCANLKNLRVLDCRRNHITDISVVCTLPKIEQLLADHNQL 429

Query: 186 DLITMATRLSVTSKELSLEGM-NLSAIPSEIWEAGEITKLDLSRNSIQELPP-ELSSCAS 243
             + ++   ++   + S   +  L+ +P  +     +T+L+LS   +  L    L+   +
Sbjct: 430 HALDISFGPALKQLDASHNDITQLNPVPGPLGRPYALTELNLSYAKLSTLDDLALAQLTA 489

Query: 244 LQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPS---------------DGFKD 288
           L++L +  N ++  P++ L  LS L  L   NN L  +PS               +   +
Sbjct: 490 LESLYIDHNSLRSLPES-LGGLSKLKHLSCSNNHLFTLPSSLGRLQWLEVLEAHNNDLSE 548

Query: 289 IPM-------LQILDLSYNIASLPENPP-------------------------------F 310
           +PM       LQ+++++ N+ S    PP                                
Sbjct: 549 LPMSLWNCSSLQVINVTSNVISTWNLPPGSIDLEVHATQTWGSTVSLLSDRKASSSSITG 608

Query: 311 SSLP----HLQELYLRRMQLREAPTDILRL-QQLRILDLSQNSLQSIPEG-FKNLTSLTE 364
           S+LP     L++LY+    L       L L ++LR+L+LS N++Q +P   F+NLT L E
Sbjct: 609 STLPALAASLEKLYVGENSLTADSLHPLALLKELRVLNLSFNNIQQLPGSFFRNLTQLRE 668

Query: 365 LDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR--------TILDRGTKAVLKY 414
           L LS N ISA+P E       L+ L L+GN L+++ R        T++D G+  VLKY
Sbjct: 669 LYLSGNTISAIPTENLQHMTKLEVLFLNGNKLQTLPREISKLVNLTVMDVGSN-VLKY 725



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 98/194 (50%), Gaps = 3/194 (1%)

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS-LQTLILSRNKIKDWPDAILTSL 265
           N+   P E  +      +DL+  S++ +P  L + A  + +L LSRN + + P   + S 
Sbjct: 196 NVLGPPEEEMQFDTFDLIDLTSRSLKAVPVSLYAHAEVIVSLNLSRNPMLEIPLDFIQSC 255

Query: 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQ 325
           SSL  L+L +  L++VP    +    L+ LDLS N  +  E+     +P L  L L   +
Sbjct: 256 SSLKELRLSHMALKKVPQ-SVRHCRTLEWLDLSCNRIADLEDAGLDQIPGLSHLKLENNR 314

Query: 326 LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPS 385
           +   P    RL++L  L++S N  + IP G   L SL +LD S N+IS LP ELG L   
Sbjct: 315 MENLPYYFPRLRKLGYLNISNNKFKHIPAGVCELRSLVDLDASFNSISELPEELGQLT-E 373

Query: 386 LQALRLDGNPLRSI 399
           L  L + GN +  I
Sbjct: 374 LDHLTIVGNRVAKI 387



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 162/380 (42%), Gaps = 74/380 (19%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L++   KL+ L +  +A  T L  L    N L  +PE++G LS+L  L    N + +
Sbjct: 466 LTELNLSYAKLSTLDDLALAQLTALESLYIDHNSLRSLPESLGGLSKLKHLSCSNNHLFT 525

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +PSS+     L      NN LS LP  L   S L  +++ SN +  +             
Sbjct: 526 LPSSLGRLQWLEVLEAHNNDLSELPMSLWNCSSLQVINVTSNVISTW------------- 572

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
                   LPP              G+    + ++   G T +LL        + + S +
Sbjct: 573 -------NLPP--------------GSIDLEVHATQTWGSTVSLLS-------DRKASSS 604

Query: 181 STTKEDLITMAT---RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
           S T   L  +A    +L V    L+ + ++  A+        E+  L+LS N+IQ+LP  
Sbjct: 605 SITGSTLPALAASLEKLYVGENSLTADSLHPLAL------LKELRVLNLSFNNIQQLPGS 658

Query: 238 -LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296
              +   L+ L LS N I   P   L  ++ L  L L+ N L+ +P +    +  L ++D
Sbjct: 659 FFRNLTQLRELYLSGNTISAIPTENLQHMTKLEVLFLNGNKLQTLPRE-ISKLVNLTVMD 717

Query: 297 -----LSYNIASLPENPPFSSLPHLQELYL---RRMQLR-----------EAPTDILRLQ 337
                L YNI++   +  ++   +L+ L L   +R++++           +  +D   L 
Sbjct: 718 VGSNVLKYNISNWEYDWNWNFNTNLRYLNLSGNKRLEIKPDMNHRQSRNQQQLSDFSSLT 777

Query: 338 QLRIL---DLSQNSLQSIPE 354
           QLRIL   D++     +IPE
Sbjct: 778 QLRILGLMDVTIGMQTNIPE 797


>gi|374990821|ref|YP_004966316.1| small GTP-binding protein domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
 gi|297161473|gb|ADI11185.1| small GTP-binding protein domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 370

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 157/373 (42%), Gaps = 70/373 (18%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P  +   + L RLDL       +P  +     L    + +N L  LP  LG LS L   
Sbjct: 47  VPALLAEATALTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELPESLGNLSALTEF 106

Query: 98  DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            L+ N+L +  +   QL  L+ L L +N L+ LP  +G +  L  L +  N +  + SSL
Sbjct: 107 VLNGNRLAQIPIWVRQLTELTDLALRDNKLTELPEFLGGLKKLASLDVGSNRISAVPSSL 166

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
             G   AL                                   EL L G  L  IP  + 
Sbjct: 167 --GDLAAL----------------------------------SELDLSGNRLVEIPRTLG 190

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
           +   +T+L+L  N + ELP  L   A+L  L+L  N++   P A L+ L++L  L LD N
Sbjct: 191 KLTALTELNLDFNRLAELPASLGELANLSHLLLGSNRLTRLP-AELSGLTALRWLNLDRN 249

Query: 277 PLRQVP--SDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
            L ++P  + GF     L  ++L +N + +LPE      L  L  L LR           
Sbjct: 250 ELTELPPWAGGFT---ALTGINLGFNRLTALPET--LGGLTALTSLSLR----------- 293

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
                        N L  +P     LT+LT LDL DN ++ LP  +G L P+L +LRLDG
Sbjct: 294 ------------GNRLTELPASMAGLTALTSLDLGDNELTDLPAWVGDL-PALTSLRLDG 340

Query: 394 NPLRSIRRTILDR 406
           N      R + D 
Sbjct: 341 NRFSHAPRWLADH 353



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 146/302 (48%), Gaps = 31/302 (10%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++LD+     T + +  +   T LT L  S N L  +PE++G+LS L    L+ NR+  
Sbjct: 57  LTRLDLSDGTFTEVPD-FLGDLTGLTHLSLSDNRLEELPESLGNLSALTEFVLNGNRLAQ 115

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           IP  +     L +  + +N L+ LP  LG L KL +LD+ SN++         L  LS L
Sbjct: 116 IPIWVRQLTELTDLALRDNKLTELPEFLGGLKKLASLDVGSNRISAVPSSLGDLAALSEL 175

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL--VNGPTPALLKYLR-SRLPENE 176
           DLS N L  +P  +GK+T L +L L  N L  L +SL  +   +  LL   R +RLP   
Sbjct: 176 DLSGNRLVEIPRTLGKLTALTELNLDFNRLAELPASLGELANLSHLLLGSNRLTRLP--- 232

Query: 177 DSEASTTKEDLITMATRLSVTSKEL-----------SLEGMN-----LSAIPSEIWEAGE 220
            +E S      +T    L++   EL           +L G+N     L+A+P  +     
Sbjct: 233 -AELSG-----LTALRWLNLDRNELTELPPWAGGFTALTGINLGFNRLTALPETLGGLTA 286

Query: 221 ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQ 280
           +T L L  N + ELP  ++   +L +L L  N++ D P A +  L +L+ L+LD N    
Sbjct: 287 LTSLSLRGNRLTELPASMAGLTALTSLDLGDNELTDLP-AWVGDLPALTSLRLDGNRFSH 345

Query: 281 VP 282
            P
Sbjct: 346 AP 347



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 107/210 (50%), Gaps = 7/210 (3%)

Query: 172 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 231
           + +++DS A    E+LI        TS EL    ++L  +P+ + EA  +T+LDLS  + 
Sbjct: 10  MDDDDDSFALEDAEELIAQVIDDGDTSLELG--HLSLPVVPALLAEATALTRLDLSDGTF 67

Query: 232 QELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPM 291
            E+P  L     L  L LS N++++ P++ L +LS+L+   L+ N L Q+P        +
Sbjct: 68  TEVPDFLGDLTGLTHLSLSDNRLEELPES-LGNLSALTEFVLNGNRLAQIP---IWVRQL 123

Query: 292 LQILDLSYNIASLPENPPF-SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350
            ++ DL+     L E P F   L  L  L +   ++   P+ +  L  L  LDLS N L 
Sbjct: 124 TELTDLALRDNKLTELPEFLGGLKKLASLDVGSNRISAVPSSLGDLAALSELDLSGNRLV 183

Query: 351 SIPEGFKNLTSLTELDLSDNNISALPPELG 380
            IP     LT+LTEL+L  N ++ LP  LG
Sbjct: 184 EIPRTLGKLTALTELNLDFNRLAELPASLG 213


>gi|1184077|gb|AAC15780.1| Cf-2.2 [Solanum pimpinellifolium]
 gi|60327194|gb|AAX19020.1| Cf-2.2 [Solanum pimpinellifolium]
          Length = 1112

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 184/407 (45%), Gaps = 52/407 (12%)

Query: 29  IASKNLLNGMPETIGSLSRLIRLDLHQNRILS-------------------------IPS 63
           ++  N+   +P  IG+L+ L+ LDL+ N+I                           IP 
Sbjct: 102 LSKNNIYGTIPPEIGNLTNLVYLDLNNNQISGTIPPQIGLLAKLQIIRIFHNQLNGFIPK 161

Query: 64  SISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYC-VEACQLR-LSVLD 120
            I    SL +  +G N LS  +PA +G L+ L  L L++NQL      E   LR L+ LD
Sbjct: 162 EIGYLRSLTKLSLGINFLSGSIPASVGNLNNLSFLYLYNNQLSGSIPEEISYLRSLTELD 221

Query: 121 LSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPEN 175
           LS+N+L+G +P  +G M  L  L L GN L         G  P  + YLRS     L EN
Sbjct: 222 LSDNALNGSIPASLGNMNNLSFLFLYGNQLS--------GSIPEEICYLRSLTYLDLSEN 273

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-EL 234
             + +       +   + L +   +LS       +IP EI     +  L LS N++   +
Sbjct: 274 ALNGSIPASLGNLNNLSFLFLYGNQLS------GSIPEEIGYLRSLNVLGLSENALNGSI 327

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P  L +  +L  L L  N++     A L +L++LS L L NN L         ++  L +
Sbjct: 328 PASLGNLKNLSRLNLVNNQLSGSIPASLGNLNNLSMLYLYNNQLSGSIPASLGNLNNLSM 387

Query: 295 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREA-PTDILRLQQLRILDLSQNSLQS-I 352
           L L  N  S        +L +L  LYL   QL  + P +I  L  L  LDLS NS+   I
Sbjct: 388 LYLYNNQLSGSIPASLGNLNNLSRLYLYNNQLSGSIPEEIGYLSSLTYLDLSNNSINGFI 447

Query: 353 PEGFKNLTSLTELDLSDNNI-SALPPELGLLEPSLQALRLDGNPLRS 398
           P  F N+++L  L L +N + S++P E+G L  SL  L L  N L  
Sbjct: 448 PASFGNMSNLAFLFLYENQLASSVPEEIGYLR-SLNVLDLSENALNG 493



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 195/449 (43%), Gaps = 87/449 (19%)

Query: 25  LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNAL- 81
           L+ L    N L+G +PE IG LS L  LDL  N I   IP+S     +LA  ++  N L 
Sbjct: 409 LSRLYLYNNQLSGSIPEEIGYLSSLTYLDLSNNSINGFIPASFGNMSNLAFLFLYENQLA 468

Query: 82  SALPAELGKLSKLGTLDLHSNQLKEYC-------------------------VEACQLR- 115
           S++P E+G L  L  LDL  N L                              E   LR 
Sbjct: 469 SSVPEEIGYLRSLNVLDLSENALNGSIPASFGNLNNLSRLNLVNNQLSGSIPEEIGYLRS 528

Query: 116 LSVLDLSNNSLSG-------------------------LPPEIGKMTTLRKLLLTGNPLR 150
           L+VLDLS N+L+G                         +P EIG + +L  L L+ N L 
Sbjct: 529 LNVLDLSENALNGSIPASFGNLNNLSRLNLVNNQLSGSIPEEIGYLRSLNDLGLSENAL- 587

Query: 151 TLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
                  NG  PA L  L +     L  N+ S +   +   ++  T LS+ +   SL G+
Sbjct: 588 -------NGSIPASLGNLNNLSMLYLYNNQLSGSIPEEIGYLSSLTYLSLGNN--SLNGL 638

Query: 207 NLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 265
               IP+       +  L L+ N+ I E+P  + +  SL+ L + RN +K      L ++
Sbjct: 639 ----IPASFGNMRNLQALILNDNNLIGEIPSSVCNLTSLEVLYMPRNNLKGKVPQCLGNI 694

Query: 266 SSLSCLKLDNNPLR-QVPSDGFKDIPMLQILDLSYNI--ASLPENPPFSSLPHLQELYLR 322
           S+L  L + +N    ++PS    ++  LQILD   N    ++P+   F ++  L+   ++
Sbjct: 695 SNLQVLSMSSNSFSGELPSS-ISNLTSLQILDFGRNNLEGAIPQ--CFGNISSLEVFDMQ 751

Query: 323 RMQLREA-PTDILRLQQLRILDLSQNSLQS-IPEGFKNLTSLTELDLSDNNIS-ALPPEL 379
             +L    PT+      L  L+L  N L+  IP    N   L  LDL DN ++   P  L
Sbjct: 752 NNKLSGTLPTNFSIGCSLISLNLHGNELEDEIPRSLDNCKKLQVLDLGDNQLNDTFPMWL 811

Query: 380 GLLEPSLQALRLDGN----PLRSIRRTIL 404
           G L P L+ LRL  N    P+RS R  I+
Sbjct: 812 GTL-PELRVLRLTSNKLHGPIRSSRAEIM 839



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 147/341 (43%), Gaps = 52/341 (15%)

Query: 25  LTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRI-LSIPSSISGCCSLAEFYMGNNALS 82
           L  L  S N  +G +P +I +L+ L  LD  +N +  +IP       SL  F M NN LS
Sbjct: 697 LQVLSMSSNSFSGELPSSISNLTSLQILDFGRNNLEGAIPQCFGNISSLEVFDMQNNKLS 756

Query: 83  A-LPAELGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLDLSNNSLSG-LPPEIGKMT 137
             LP        L +L+LH N+L++     ++ C+ +L VLDL +N L+   P  +G + 
Sbjct: 757 GTLPTNFSIGCSLISLNLHGNELEDEIPRSLDNCK-KLQVLDLGDNQLNDTFPMWLGTLP 815

Query: 138 TLRKLLLTGNPLRT-LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 196
            LR L LT N L   +RSS      P L     SR   ++D   S   E L  M T +  
Sbjct: 816 ELRVLRLTSNKLHGPIRSSRAEIMFPDLRIIDLSRNAFSQDLPTSLF-EHLKGMRT-VDK 873

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI-LSRNKIK 255
           T +E S E     ++         +TK          L  E+    SL T+I LS NK +
Sbjct: 874 TMEEPSYESYYDDSVVV-------VTK---------GLELEIVRILSLYTVIDLSSNKFE 917

Query: 256 DWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH 315
               ++L  L ++  L + +N L+         + +L+ LDLS+N  S            
Sbjct: 918 GHIPSVLGDLIAIRILNVSHNALQGYIPSSLGSLSILESLDLSFNQLS------------ 965

Query: 316 LQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS-IPEG 355
                       E P  +  L  L  L+LS N LQ  IP+G
Sbjct: 966 -----------GEIPQQLASLTFLEFLNLSHNYLQGCIPQG 995



 Score = 45.1 bits (105), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 87/183 (47%), Gaps = 35/183 (19%)

Query: 221 ITKLDLSRNSIQ-ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLR 279
           +  LDLS+N+I   +PPE+ +  +L  L L+ N+I       +  L+ L  +++ +N L 
Sbjct: 97  LENLDLSKNNIYGTIPPEIGNLTNLVYLDLNNNQISGTIPPQIGLLAKLQIIRIFHNQL- 155

Query: 280 QVPSDGF--KDIPMLQIL-DLSYNIASLPENPPFS--SLPHLQELYLRRMQLREAPTDIL 334
               +GF  K+I  L+ L  LS  I  L  + P S  +L +L  LYL   QL        
Sbjct: 156 ----NGFIPKEIGYLRSLTKLSLGINFLSGSIPASVGNLNNLSFLYLYNNQLS------- 204

Query: 335 RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISA-LPPELGLLEPSLQALRLDG 393
                           SIPE    L SLTELDLSDN ++  +P  LG +  +L  L L G
Sbjct: 205 ---------------GSIPEEISYLRSLTELDLSDNALNGSIPASLGNMN-NLSFLFLYG 248

Query: 394 NPL 396
           N L
Sbjct: 249 NQL 251


>gi|421094636|ref|ZP_15555352.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362698|gb|EKP13735.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|456891450|gb|EMG02161.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 331

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 140/296 (47%), Gaps = 42/296 (14%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           +++  N L  +P+ IG L +L  LDL  N++ ++P  I    +L E  +  N  + +P E
Sbjct: 47  ILSLHNKLKTLPKDIGKLKKLRVLDLRGNQLTTLPKEIEQLQNLTELNLNKNQFTTIPNE 106

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 146
           +G L  L  L +  NQLK    +  +L+ L VL LSNN L+ LP EI K+  L+KL L+ 
Sbjct: 107 IGYLKNLQELHIGGNQLKTLPKDIGKLKNLQVLHLSNNKLATLPNEIRKLQNLQKLYLSE 166

Query: 147 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 206
           N L                    + LPE      + TK                L L   
Sbjct: 167 NQL--------------------TILPEEIGKLKNLTK----------------LDLNYN 190

Query: 207 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLS 266
            L+ +P+EI +   + +L L  N +  LP E+     L  L LS N+ K  P  I   L 
Sbjct: 191 ELTTLPNEIGKLQNLQELTLGYNQLTVLPKEIRELQKLTVLYLSYNQFKTLPKEI-GELQ 249

Query: 267 SLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 321
            L+ L L +N L+  P++  K +  L+ LDLS+N + +LP+      L +L++LYL
Sbjct: 250 KLTVLYLRSNQLKMFPNEIGK-LKELESLDLSHNQLTTLPK--EIGELQNLRKLYL 302



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 103/298 (34%), Positives = 144/298 (48%), Gaps = 21/298 (7%)

Query: 109 VEACQLRLSVLDLS-NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 167
            EA Q    V  LS +N L  LP +IGK+  LR L L GN L TL         P  ++ 
Sbjct: 36  TEALQNATDVRILSLHNKLKTLPKDIGKLKKLRVLDLRGNQLTTL---------PKEIEQ 86

Query: 168 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
           L++    N +    TT  + I     L    +EL + G  L  +P +I +   +  L LS
Sbjct: 87  LQNLTELNLNKNQFTTIPNEIGYLKNL----QELHIGGNQLKTLPKDIGKLKNLQVLHLS 142

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            N +  LP E+    +LQ L LS N++   P+ I   L +L+ L L+ N L  +P++  K
Sbjct: 143 NNKLATLPNEIRKLQNLQKLYLSENQLTILPEEI-GKLKNLTKLDLNYNELTTLPNEIGK 201

Query: 288 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
            +  LQ L L YN +  LP+      L  L  LYL   Q +  P +I  LQ+L +L L  
Sbjct: 202 -LQNLQELTLGYNQLTVLPK--EIRELQKLTVLYLSYNQFKTLPKEIGELQKLTVLYLRS 258

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP-LRSIRRTI 403
           N L+  P     L  L  LDLS N ++ LP E+G L+ +L+ L LD  P LRS    I
Sbjct: 259 NQLKMFPNEIGKLKELESLDLSHNQLTTLPKEIGELQ-NLRKLYLDDIPALRSQEEKI 315



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 125/277 (45%), Gaps = 39/277 (14%)

Query: 9   NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 68
           NKL  L  + I     L  L    N L  +P+ I  L  L  L+L++N+  +IP+ I   
Sbjct: 52  NKLKTLPKD-IGKLKKLRVLDLRGNQLTTLPKEIEQLQNLTELNLNKNQFTTIPNEIGYL 110

Query: 69  CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 127
            +L E ++G N L  LP ++GKL  L  L L +N+L     E  +L+ L  L LS N L+
Sbjct: 111 KNLQELHIGGNQLKTLPKDIGKLKNLQVLHLSNNKLATLPNEIRKLQNLQKLYLSENQLT 170

Query: 128 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187
            LP EIGK+  L KL L  N L TL + +  G    L                       
Sbjct: 171 ILPEEIGKLKNLTKLDLNYNELTTLPNEI--GKLQNL----------------------- 205

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
                      +EL+L    L+ +P EI E  ++T L LS N  + LP E+     L  L
Sbjct: 206 -----------QELTLGYNQLTVLPKEIRELQKLTVLYLSYNQFKTLPKEIGELQKLTVL 254

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
            L  N++K +P+ I   L  L  L L +N L  +P +
Sbjct: 255 YLRSNQLKMFPNEI-GKLKELESLDLSHNQLTTLPKE 290



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 81/150 (54%), Gaps = 2/150 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L +  NKL  L N  I     L +L  S+N L  +PE IG L  L +LDL+ N + ++P+
Sbjct: 139 LHLSNNKLATLPNE-IRKLQNLQKLYLSENQLTILPEEIGKLKNLTKLDLNYNELTTLPN 197

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I    +L E  +G N L+ LP E+ +L KL  L L  NQ K    E  +L +L+VL L 
Sbjct: 198 EIGKLQNLQELTLGYNQLTVLPKEIRELQKLTVLYLSYNQFKTLPKEIGELQKLTVLYLR 257

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           +N L   P EIGK+  L  L L+ N L TL
Sbjct: 258 SNQLKMFPNEIGKLKELESLDLSHNQLTTL 287



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 111/250 (44%), Gaps = 38/250 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++L++  N+ T + N  I     L EL    N L  +P+ IG L  L  L L  N++ +
Sbjct: 90  LTELNLNKNQFTTIPNE-IGYLKNLQELHIGGNQLKTLPKDIGKLKNLQVLHLSNNKLAT 148

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P+ I    +L + Y+  N L+ LP E+GKL  L  LDL+ N+L     E  +L+ L  L
Sbjct: 149 LPNEIRKLQNLQKLYLSENQLTILPEEIGKLKNLTKLDLNYNELTTLPNEIGKLQNLQEL 208

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
            L  N L+ LP EI ++  L  L L+ N  +TL   +       +L YLRS         
Sbjct: 209 TLGYNQLTVLPKEIRELQKLTVLYLSYNQFKTLPKEIGELQKLTVL-YLRSN-------- 259

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                                       L   P+EI +  E+  LDLS N +  LP E+ 
Sbjct: 260 ---------------------------QLKMFPNEIGKLKELESLDLSHNQLTTLPKEIG 292

Query: 240 SCASLQTLIL 249
              +L+ L L
Sbjct: 293 ELQNLRKLYL 302



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 28/226 (12%)

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
           +E   T  D +T A + +   + LSL    L  +P +I +  ++  LDL  N +  LP E
Sbjct: 25  AEDKRTTYDNLTEALQNATDVRILSLHN-KLKTLPKDIGKLKKLRVLDLRGNQLTTLPKE 83

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297
           +    +L  L L++N+    P+ I   L +L  L +  N L+ +P D             
Sbjct: 84  IEQLQNLTELNLNKNQFTTIPNEI-GYLKNLQELHIGGNQLKTLPKD------------- 129

Query: 298 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFK 357
                          L +LQ L+L   +L   P +I +LQ L+ L LS+N L  +PE   
Sbjct: 130 ------------IGKLKNLQVLHLSNNKLATLPNEIRKLQNLQKLYLSENQLTILPEEIG 177

Query: 358 NLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
            L +LT+LDL+ N ++ LP E+G L+ +LQ L L  N L  + + I
Sbjct: 178 KLKNLTKLDLNYNELTTLPNEIGKLQ-NLQELTLGYNQLTVLPKEI 222


>gi|440297287|gb|ELP89981.1| leucine-rich repeat-containing protein 33 precursor, putative
           [Entamoeba invadens IP1]
          Length = 858

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 198/429 (46%), Gaps = 43/429 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N L   S ++    T LTEL  S N +  + +  G++  L  +D+  NRIL+IP 
Sbjct: 76  LDLSSNHLKKFSKSI--KLTSLTELNMSINQITKISDEFGTMQALRYIDMSINRILAIPK 133

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            +S   +L    M NN L+  P  L +L+ L  L +  N++        ++  L +LD+S
Sbjct: 134 HMSKLSNLTFIDMSNNLLNNFPTPLLELTGLVVLKVKDNKIATIPNGMSKMASLQILDIS 193

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY---LRSRLPENEDSE 179
           NN +  + P + K+T L  L ++ NP+  +   + N  T   + +   L   LP++  S 
Sbjct: 194 NNRIDKITPSLCKLTKLSVLDVSANPVNEINDQIANLTTIKEINFSYSLLKTLPKSFMSL 253

Query: 180 ASTTKEDLITMATRL--SVTSKELSLEGMNLSAIPSEIWEAGEITK---LDLSRNSIQEL 234
               K  L   + ++  S   K  ++  +NLS    E+ +  E+ K   +DLS N I E+
Sbjct: 254 IGLKKLTLQHTSVKVPPSGLQKFTNVSELNLSN--GELEKVTELPKSGDIDLSSNQIVEM 311

Query: 235 P-PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP----------- 282
             PE+     +  L LS NK+KD+P+  +  LS +  L +  N L  VP           
Sbjct: 312 DLPEME--YGIHKLNLSSNKLKDFPN--IKKLSVIKTLIIQKNMLGSVPEEMLTGTSLTE 367

Query: 283 ----SDGFKDIPM-------LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAP 330
               S+ F   PM       L  L++S N + SLP+   +S L  L+EL L    +   P
Sbjct: 368 LDLSSNSFNSFPMAITTCTNLVRLNMSNNYLDSLPD-ISYSCLAKLEELLLGINIIDRLP 426

Query: 331 TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
             +  L  L  L L  N L  IPE   ++  L  L L+ N I  LP +  LL  +L+ L 
Sbjct: 427 DTMSELTNLTSLHLEHNKLSKIPESLFSMGRLVGLFLNCNQIPELPEKFSLL-TNLEMLE 485

Query: 391 LDGNPLRSI 399
           L  N ++ +
Sbjct: 486 LSCNFIKDV 494



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 186/408 (45%), Gaps = 52/408 (12%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           LT +  S NLLN  P  +  L+ L+ L +  N+I +IP+ +S   SL    + NN +  +
Sbjct: 141 LTFIDMSNNLLNNFPTPLLELTGLVVLKVKDNKIATIPNGMSKMASLQILDISNNRIDKI 200

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
              L KL+KL  LD+ +N + E   +   L  +  ++ S + L  LP     +  L+KL 
Sbjct: 201 TPSLCKLTKLSVLDVSANPVNEINDQIANLTTIKEINFSYSLLKTLPKSFMSLIGLKKL- 259

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLR--------------SRLPENEDSEAST---TKED 186
                  TL+ + V  P   L K+                + LP++ D + S+    + D
Sbjct: 260 -------TLQHTSVKVPPSGLQKFTNVSELNLSNGELEKVTELPKSGDIDLSSNQIVEMD 312

Query: 187 LITMA-------------------TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 227
           L  M                     +LSV  K L ++   L ++P E+     +T+LDLS
Sbjct: 313 LPEMEYGIHKLNLSSNKLKDFPNIKKLSVI-KTLIIQKNMLGSVPEEMLTGTSLTELDLS 371

Query: 228 RNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
            NS    P  +++C +L  L +S N +   PD   + L+ L  L L  N + ++P D   
Sbjct: 372 SNSFNSFPMAITTCTNLVRLNMSNNYLDSLPDISYSCLAKLEELLLGINIIDRLP-DTMS 430

Query: 288 DIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
           ++  L  L L +N ++ +PE+    S+  L  L+L   Q+ E P     L  L +L+LS 
Sbjct: 431 ELTNLTSLHLEHNKLSKIPES--LFSMGRLVGLFLNCNQIPELPEKFSLLTNLEMLELSC 488

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
           N ++ +     NL ++ +LDLS N I   P  L  +  SL++L L  N
Sbjct: 489 NFIKDVTP-ITNLVAIKDLDLSTNEILTCPSNLCSM-TSLKSLDLSYN 534



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 174/371 (46%), Gaps = 49/371 (13%)

Query: 31  SKNLLNGMPETIGS-LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
           +KNL+    E +   +  L+ +D+  NRI  +PS I+    L +    +N +  LP ++ 
Sbjct: 10  AKNLIEFPSEEVKKEIKNLVSIDISMNRIQELPSQINSLPKLQKLRANDNMIKTLPNQIN 69

Query: 90  KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
            +  L TLDL SN LK++        L+ L++S N ++ +  E G M  LR + ++ N  
Sbjct: 70  -IPTLKTLDLSSNHLKKFSKSIKLTSLTELNMSINQITKISDEFGTMQALRYIDMSIN-- 126

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
           R L          A+ K++ S+L          +    I M+  L             L+
Sbjct: 127 RIL----------AIPKHM-SKL----------SNLTFIDMSNNL-------------LN 152

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
             P+ + E   +  L +  N I  +P  +S  ASLQ L +S N+I D     L  L+ LS
Sbjct: 153 NFPTPLLELTGLVVLKVKDNKIATIPNGMSKMASLQILDISNNRI-DKITPSLCKLTKLS 211

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLRE 328
            L +  NP+ ++ +D   ++  ++ ++ SY+ + +LP++  F SL  L++L L+   ++ 
Sbjct: 212 VLDVSANPVNEI-NDQIANLTTIKEINFSYSLLKTLPKS--FMSLIGLKKLTLQHTSVKV 268

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
            P+ + +   +  L+LS   L+ + E    L    ++DLS N I  +  +L  +E  +  
Sbjct: 269 PPSGLQKFTNVSELNLSNGELEKVTE----LPKSGDIDLSSNQIVEM--DLPEMEYGIHK 322

Query: 389 LRLDGNPLRSI 399
           L L  N L+  
Sbjct: 323 LNLSSNKLKDF 333



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 29/226 (12%)

Query: 207 NLSAIPSE--IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 264
           NL   PSE    E   +  +D+S N IQELP +++S   LQ L  + N IK  P+ I  +
Sbjct: 12  NLIEFPSEEVKKEIKNLVSIDISMNRIQELPSQINSLPKLQKLRANDNMIKTLPNQI--N 69

Query: 265 LSSLSCLKLDNNPLRQVP---------------------SDGFKDIPMLQILDLSYN-IA 302
           + +L  L L +N L++                       SD F  +  L+ +D+S N I 
Sbjct: 70  IPTLKTLDLSSNHLKKFSKSIKLTSLTELNMSINQITKISDEFGTMQALRYIDMSINRIL 129

Query: 303 SLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSL 362
           ++P++   S L +L  + +    L   PT +L L  L +L +  N + +IP G   + SL
Sbjct: 130 AIPKH--MSKLSNLTFIDMSNNLLNNFPTPLLELTGLVVLKVKDNKIATIPNGMSKMASL 187

Query: 363 TELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGT 408
             LD+S+N I  + P L  L   L  L +  NP+  I   I +  T
Sbjct: 188 QILDISNNRIDKITPSLCKL-TKLSVLDVSANPVNEINDQIANLTT 232



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 71/145 (48%)

Query: 3   KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +L++  N L  L +   +    L EL+   N+++ +P+T+  L+ L  L L  N++  IP
Sbjct: 390 RLNMSNNYLDSLPDISYSCLAKLEELLLGINIIDRLPDTMSELTNLTSLHLEHNKLSKIP 449

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 122
            S+     L   ++  N +  LP +   L+ L  L+L  N +K+       + +  LDLS
Sbjct: 450 ESLFSMGRLVGLFLNCNQIPELPEKFSLLTNLEMLELSCNFIKDVTPITNLVAIKDLDLS 509

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGN 147
            N +   P  +  MT+L+ L L+ N
Sbjct: 510 TNEILTCPSNLCSMTSLKSLDLSYN 534


>gi|390343687|ref|XP_003725942.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1-like [Strongylocentrotus purpuratus]
          Length = 744

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 180/435 (41%), Gaps = 70/435 (16%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L +L    N L  +P  I  L  L  L L QN    +P  I     L E Y+  N +  +
Sbjct: 281 LVKLSLCGNYLQTLPADIEYLFNLQELHLEQNSFFYLPIQIYWLPELEELYLSQNHIQEI 340

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQL-----------RLSVL-------------- 119
            +E+ KL+KL  LDL +N+L     E C L           RL+ L              
Sbjct: 341 SSEIQKLTKLRVLDLGTNELNTVPQEICLLLNLVFLGLGSNRLTSLPDNMNRLYKLVEFL 400

Query: 120 ----------------------DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS-- 155
                                 DLSNN +S LP EI  +  +  L L GN + T      
Sbjct: 401 VGNNELTEIPDDLSLLSQLQVLDLSNNHMSELPVEIASLKQVNVLSLQGNQISTFPPGAC 460

Query: 156 -LVNGPTPALLKYLRSRLPENEDSEASTTK--EDLITMATRLSVTSKEL----SLEGMNL 208
            L      +  + L SRLP    SE    K  + +     RL+   KEL    +L+ ++L
Sbjct: 461 LLSKCEELSFDRNLLSRLP----SEVKHMKSLQSVTITNNRLTQFPKELCEVRTLQFLDL 516

Query: 209 -----SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263
                S++P+ +     + K  L+ N+   + PE+ +  +L +L +S N+I +  + + +
Sbjct: 517 SQNLISSVPASVRRLQNLEKFILNENTFTAITPEMCTLKNLVSLSMSDNQITEICEEV-S 575

Query: 264 SLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL--SYNIASLPENPPFSSLPHLQELYL 321
               L  L L NN     P + +  I  L+IL       + +    P   +   L+E+Y+
Sbjct: 576 MYQRLEALDLSNNQFPVFPPEIWT-ILRLRILHFIQEKGVKASFLQPAIYNCQDLEEIYV 634

Query: 322 RRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGL 381
           +   L   P  I  L +LRI   S N L  IPE F  L +L  L L  N I +LP    +
Sbjct: 635 QHNCLTMIPNTIRSLSKLRIFCASDNCLMDIPEVFCELKNLEVLKLERNQIKSLPINFEM 694

Query: 382 LEPSLQALRLDGNPL 396
           L   L+ LRLD NPL
Sbjct: 695 LS-ELRVLRLDTNPL 708



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 171/379 (45%), Gaps = 41/379 (10%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L   P +I +L  L  LDL  N I  IP+ I    SL +  + +N L+ALP E   L KL
Sbjct: 176 LTEFPGSICALPLLEHLDLSGNEIQEIPTEIRMLSSLQQIDLSDNQLTALPNEFCHLRKL 235

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             + L  N+L         LR + VL+++NN L  LP ++  +  L KL L GN L+TL 
Sbjct: 236 ICVFLSQNKLTSLPANISHLRNIQVLEMNNNMLKWLPKQVCLLDQLVKLSLCGNYLQTL- 294

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
                   PA ++YL                              +EL LE  +   +P 
Sbjct: 295 --------PADIEYL---------------------------FNLQELHLEQNSFFYLPI 319

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           +I+   E+ +L LS+N IQE+  E+     L+ L L  N++   P  I   L+ +  L L
Sbjct: 320 QIYWLPELEELYLSQNHIQEISSEIQKLTKLRVLDLGTNELNTVPQEICLLLNLVF-LGL 378

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
            +N L  +P +  +   +++ L  +  +  +P++    S   + +L    M   E P +I
Sbjct: 379 GSNRLTSLPDNMNRLYKLVEFLVGNNELTEIPDDLSLLSQLQVLDLSNNHM--SELPVEI 436

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
             L+Q+ +L L  N + + P G   L+   EL    N +S LP E+  ++ SLQ++ +  
Sbjct: 437 ASLKQVNVLSLQGNQISTFPPGACLLSKCEELSFDRNLLSRLPSEVKHMK-SLQSVTITN 495

Query: 394 NPLRSIRRTILDRGTKAVL 412
           N L    + + +  T   L
Sbjct: 496 NRLTQFPKELCEVRTLQFL 514



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 179/415 (43%), Gaps = 61/415 (14%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I +  +L  L  S N +  +P  I  LS L ++DL  N++ ++P+       L   ++  
Sbjct: 183 ICALPLLEHLDLSGNEIQEIPTEIRMLSSLQQIDLSDNQLTALPNEFCHLRKLICVFLSQ 242

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N L++LPA +  L  +  L++++N LK    + C L +L  L L  N L  LP +I  + 
Sbjct: 243 NKLTSLPANISHLRNIQVLEMNNNMLKWLPKQVCLLDQLVKLSLCGNYLQTLPADIEYLF 302

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT-RLSV 196
            L++L L  N    L   +   P    L   ++ + E        TK  ++ + T  L+ 
Sbjct: 303 NLQELHLEQNSFFYLPIQIYWLPELEELYLSQNHIQEISSEIQKLTKLRVLDLGTNELNT 362

Query: 197 TSKELSL------------------EGMN--------------LSAIPSEIWEAGEITKL 224
             +E+ L                  + MN              L+ IP ++    ++  L
Sbjct: 363 VPQEICLLLNLVFLGLGSNRLTSLPDNMNRLYKLVEFLVGNNELTEIPDDLSLLSQLQVL 422

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           DLS N + ELP E++S   +  L L  N+I  +P      LS    L  D N L ++PS+
Sbjct: 423 DLSNNHMSELPVEIASLKQVNVLSLQGNQISTFPPGACL-LSKCEELSFDRNLLSRLPSE 481

Query: 285 GFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
                                       +  LQ + +   +L + P ++  ++ L+ LDL
Sbjct: 482 -------------------------VKHMKSLQSVTITNNRLTQFPKELCEVRTLQFLDL 516

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           SQN + S+P   + L +L +  L++N  +A+ PE+  L+ +L +L +  N +  I
Sbjct: 517 SQNLISSVPASVRRLQNLEKFILNENTFTAITPEMCTLK-NLVSLSMSDNQITEI 570



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 156/340 (45%), Gaps = 22/340 (6%)

Query: 58  ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 116
           +  IPS +S    L    +   +L+  P  +  L  L  LDL  N+++E   E   L  L
Sbjct: 153 LYEIPSGLSYLQQLDSLTLRECSLTEFPGSICALPLLEHLDLSGNEIQEIPTEIRMLSSL 212

Query: 117 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--RLPE 174
             +DLS+N L+ LP E   +  L  + L+ N L +L         PA + +LR+   L  
Sbjct: 213 QQIDLSDNQLTALPNEFCHLRKLICVFLSQNKLTSL---------PANISHLRNIQVLEM 263

Query: 175 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 234
           N +      K+  + +  +L     +LSL G  L  +P++I     + +L L +NS   L
Sbjct: 264 NNNMLKWLPKQ--VCLLDQLV----KLSLCGNYLQTLPADIEYLFNLQELHLEQNSFFYL 317

Query: 235 PPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
           P ++     L+ L LS+N I++    I   L+ L  L L  N L  VP +    + ++ +
Sbjct: 318 PIQIYWLPELEELYLSQNHIQEISSEI-QKLTKLRVLDLGTNELNTVPQEICLLLNLVFL 376

Query: 295 LDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE 354
              S  + SLP+N   + L  L E  +   +L E P D+  L QL++LDLS N +  +P 
Sbjct: 377 GLGSNRLTSLPDN--MNRLYKLVEFLVGNNELTEIPDDLSLLSQLQVLDLSNNHMSELPV 434

Query: 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394
              +L  +  L L  N IS  PP   LL    + L  D N
Sbjct: 435 EIASLKQVNVLSLQGNQISTFPPGACLLS-KCEELSFDRN 473



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 175/395 (44%), Gaps = 46/395 (11%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL  S+N +  +   I  L++L  LDL  N + ++P  I    +L    +G+N L++L
Sbjct: 327 LEELYLSQNHIQEISSEIQKLTKLRVLDLGTNELNTVPQEICLLLNLVFLGLGSNRLTSL 386

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLL 143
           P  + +L KL    + +N+L E   +   L    + DLSNN +S LP EI  +  +  L 
Sbjct: 387 PDNMNRLYKLVEFLVGNNELTEIPDDLSLLSQLQVLDLSNNHMSELPVEIASLKQVNVLS 446

Query: 144 LTGNPLRTLRSS---LVNGPTPALLKYLRSRLPENEDSEASTTK--EDLITMATRLSVTS 198
           L GN + T       L      +  + L SRLP    SE    K  + +     RL+   
Sbjct: 447 LQGNQISTFPPGACLLSKCEELSFDRNLLSRLP----SEVKHMKSLQSVTITNNRLTQFP 502

Query: 199 KEL----SLEGMNLS-----AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
           KEL    +L+ ++LS     ++P+ +     + K  L+ N+   + PE+ +  +L +L +
Sbjct: 503 KELCEVRTLQFLDLSQNLISSVPASVRRLQNLEKFILNENTFTAITPEMCTLKNLVSLSM 562

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL--SYNIASLPEN 307
           S N+I +  + + +    L  L L NN     P + +  I  L+IL       + +    
Sbjct: 563 SDNQITEICEEV-SMYQRLEALDLSNNQFPVFPPEIWT-ILRLRILHFIQEKGVKASFLQ 620

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI-----------------------LDL 344
           P   +   L+E+Y++   L   P  I  L +LRI                       L L
Sbjct: 621 PAIYNCQDLEEIYVQHNCLTMIPNTIRSLSKLRIFCASDNCLMDIPEVFCELKNLEVLKL 680

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            +N ++S+P  F+ L+ L  L L  N ++  P E+
Sbjct: 681 ERNQIKSLPINFEMLSELRVLRLDTNPLAHPPSEV 715



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 43/284 (15%)

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 177
            LDLS   +S +PP+  ++  L  L +T  PL  +         P+ L YL+ +L     
Sbjct: 122 CLDLSEEDISVIPPDTFELDFLNYLSVTCLPLYEI---------PSGLSYLQ-QLDSLTL 171

Query: 178 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 237
            E S T+      A  L    + L L G  +  IP+EI     + ++DLS N +  LP E
Sbjct: 172 RECSLTEFPGSICALPLL---EHLDLSGNEIQEIPTEIRMLSSLQQIDLSDNQLTALPNE 228

Query: 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML-QILD 296
                 L  + LS+NK+   P A ++ L ++  L+++NN L+ +P    K + +L Q++ 
Sbjct: 229 FCHLRKLICVFLSQNKLTSLP-ANISHLRNIQVLEMNNNMLKWLP----KQVCLLDQLVK 283

Query: 297 LS----------------YNIA--SLPENPPFS------SLPHLQELYLRRMQLREAPTD 332
           LS                +N+    L +N  F        LP L+ELYL +  ++E  ++
Sbjct: 284 LSLCGNYLQTLPADIEYLFNLQELHLEQNSFFYLPIQIYWLPELEELYLSQNHIQEISSE 343

Query: 333 ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           I +L +LR+LDL  N L ++P+    L +L  L L  N +++LP
Sbjct: 344 IQKLTKLRVLDLGTNELNTVPQEICLLLNLVFLGLGSNRLTSLP 387



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 65/136 (47%), Gaps = 7/136 (5%)

Query: 270 CLKLDNNPLRQVPSDGFKDIPMLQILD-LSYNIASLPENPP-FSSLPHLQELYLRRMQLR 327
           CL L    +  +P D F+    L  L+ LS     L E P   S L  L  L LR   L 
Sbjct: 122 CLDLSEEDISVIPPDTFE----LDFLNYLSVTCLPLYEIPSGLSYLQQLDSLTLRECSLT 177

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
           E P  I  L  L  LDLS N +Q IP   + L+SL ++DLSDN ++ALP E   L   L 
Sbjct: 178 EFPGSICALPLLEHLDLSGNEIQEIPTEIRMLSSLQQIDLSDNQLTALPNEFCHLR-KLI 236

Query: 388 ALRLDGNPLRSIRRTI 403
            + L  N L S+   I
Sbjct: 237 CVFLSQNKLTSLPANI 252



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 5/160 (3%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS--- 60
           L +  N++T +    ++ +  L  L  S N     P  I ++ RL  L   Q + +    
Sbjct: 560 LSMSDNQITEICEE-VSMYQRLEALDLSNNQFPVFPPEIWTILRLRILHFIQEKGVKASF 618

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +  +I  C  L E Y+ +N L+ +P  +  LSKL       N L +     C+L+ L VL
Sbjct: 619 LQPAIYNCQDLEEIYVQHNCLTMIPNTIRSLSKLRIFCASDNCLMDIPEVFCELKNLEVL 678

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 159
            L  N +  LP     ++ LR L L  NPL    S +  G
Sbjct: 679 KLERNQIKSLPINFEMLSELRVLRLDTNPLAHPPSEVCEG 718


>gi|149370102|ref|ZP_01889953.1| Leucine-rich repeat containing protein [unidentified eubacterium
           SCB49]
 gi|149356593|gb|EDM45149.1| Leucine-rich repeat containing protein [unidentified eubacterium
           SCB49]
          Length = 308

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 120/205 (58%), Gaps = 6/205 (2%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           K ++L+   L  IP EI +  ++  LDL+ N+I+++ PE+ +  +L+ + LS NKI   P
Sbjct: 96  KTINLKQNGLVQIPKEIKQLKDLEVLDLADNNIKKISPEIGNLQALKNVYLSGNKIAYLP 155

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPE-NPPFSSLPHLQ 317
            + +   +SL  L L+NN L  +P D F  +  L++LDLSYN   L E NP +  L +L+
Sbjct: 156 VS-MGDCASLEVLTLNNNQLAYIP-DSFASLGQLKVLDLSYN--QLYELNPGWLKLNNLE 211

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           +L +   +L+  P +I + + L+ L L+ N L+++PE F +L +LT   LS+N IS LP 
Sbjct: 212 DLNIAYNKLKHIPEEINQCKSLKTLVLNDNKLKTLPESFGSLENLTLAILSNNEISVLPE 271

Query: 378 ELGLLEPSLQALRLDGNPLRSIRRT 402
            L  L  +L+ L L GN +  + + 
Sbjct: 272 NLSGL-TNLKTLILKGNTISEVEKN 295



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 136/301 (45%), Gaps = 42/301 (13%)

Query: 37  GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 96
            + E I    +  +L+L   ++  +P +I+    L       N L    ++L  L KL T
Sbjct: 38  NIDEAISENIKTKQLNLRDQQLFFLPKNINQLSELIFLNGMKNNLEHWDSDLFYLKKLKT 97

Query: 97  LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
           ++L  N L +   E  QL+ L VLDL++N++  + PEIG +  L+ + L+GN +  L  S
Sbjct: 98  INLKQNGLVQIPKEIKQLKDLEVLDLADNNIKKISPEIGNLQALKNVYLSGNKIAYLPVS 157

Query: 156 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 215
           +  G   +L                                  + L+L    L+ IP   
Sbjct: 158 M--GDCASL----------------------------------EVLTLNNNQLAYIPDSF 181

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDN 275
              G++  LDLS N + EL P      +L+ L ++ NK+K  P+ I     SL  L L++
Sbjct: 182 ASLGQLKVLDLSYNQLYELNPGWLKLNNLEDLNIAYNKLKHIPEEI-NQCKSLKTLVLND 240

Query: 276 NPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL 334
           N L+ +P + F  +  L +  LS N I+ LPEN   S L +L+ L L+   + E   + +
Sbjct: 241 NKLKTLP-ESFGSLENLTLAILSNNEISVLPEN--LSGLTNLKTLILKGNTISEVEKNRI 297

Query: 335 R 335
           R
Sbjct: 298 R 298



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 2/129 (1%)

Query: 29  IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 88
           +A  N+    PE IG+L  L  + L  N+I  +P S+  C SL    + NN L+ +P   
Sbjct: 123 LADNNIKKISPE-IGNLQALKNVYLSGNKIAYLPVSMGDCASLEVLTLNNNQLAYIPDSF 181

Query: 89  GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 147
             L +L  LDL  NQL E      +L  L  L+++ N L  +P EI +  +L+ L+L  N
Sbjct: 182 ASLGQLKVLDLSYNQLYELNPGWLKLNNLEDLNIAYNKLKHIPEEINQCKSLKTLVLNDN 241

Query: 148 PLRTLRSSL 156
            L+TL  S 
Sbjct: 242 KLKTLPESF 250



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 97/241 (40%), Gaps = 27/241 (11%)

Query: 25  LTELIASKNLLNGMPETIGS-------LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
           L+ELI     LNGM   +         L +L  ++L QN ++ IP  I     L    + 
Sbjct: 69  LSELI----FLNGMKNNLEHWDSDLFYLKKLKTINLKQNGLVQIPKEIKQLKDLEVLDLA 124

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA--CQLRLSVLDLSNNSLSGLPPEIGK 135
           +N +  +  E+G L  L  + L  N++    V    C   L VL L+NN L+ +P     
Sbjct: 125 DNNIKKISPEIGNLQALKNVYLSGNKIAYLPVSMGDCA-SLEVLTLNNNQLAYIPDSFAS 183

Query: 136 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 195
           +  L+ L L+ N L  L         P  LK     L   ED   +  K   I       
Sbjct: 184 LGQLKVLDLSYNQLYEL--------NPGWLK-----LNNLEDLNIAYNKLKHIPEEINQC 230

Query: 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIK 255
            + K L L    L  +P        +T   LS N I  LP  LS   +L+TLIL  N I 
Sbjct: 231 KSLKTLVLNDNKLKTLPESFGSLENLTLAILSNNEISVLPENLSGLTNLKTLILKGNTIS 290

Query: 256 D 256
           +
Sbjct: 291 E 291



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 3/96 (3%)

Query: 319 LYLRRMQ--LREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376
           ++L  M+  L    +D+  L++L+ ++L QN L  IP+  K L  L  LDL+DNNI  + 
Sbjct: 73  IFLNGMKNNLEHWDSDLFYLKKLKTINLKQNGLVQIPKEIKQLKDLEVLDLADNNIKKIS 132

Query: 377 PELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVL 412
           PE+G L+ +L+ + L GN +  +  ++ D  +  VL
Sbjct: 133 PEIGNLQ-ALKNVYLSGNKIAYLPVSMGDCASLEVL 167



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 6/164 (3%)

Query: 8   GNKLTVLSNNL--IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
           GNK+  L  ++   AS  +LT    + N L  +P++  SL +L  LDL  N++  +    
Sbjct: 148 GNKIAYLPVSMGDCASLEVLT---LNNNQLAYIPDSFASLGQLKVLDLSYNQLYELNPGW 204

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 124
               +L +  +  N L  +P E+ +   L TL L+ N+LK        L  L++  LSNN
Sbjct: 205 LKLNNLEDLNIAYNKLKHIPEEINQCKSLKTLVLNDNKLKTLPESFGSLENLTLAILSNN 264

Query: 125 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
            +S LP  +  +T L+ L+L GN +  +  + +    P    Y 
Sbjct: 265 EISVLPENLSGLTNLKTLILKGNTISEVEKNRIRAALPNCTIYF 308


>gi|410901320|ref|XP_003964144.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Takifugu
           rubripes]
          Length = 524

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 166/374 (44%), Gaps = 25/374 (6%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL+   N L  +P+    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQRLPPEIANFVQLVELDVSRNDIMEI 97

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +   + L   D   N L        +LR L+ L +++ SL  LP  IG +T L  L 
Sbjct: 98  PESISYCTALQVADFSGNPLTRLPETFPELRNLTCLSINDISLQVLPENIGNLTNLVSLE 157

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKEL 201
           L  N L  L  SL      ++L  L          E      +L ++   +   V  K+L
Sbjct: 158 LRENLLTFLPESL------SMLHRL---------EELDLGNNELYSLPDSIGHLVGLKDL 202

Query: 202 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
            L+G  L+ IP+E+     +  +D+S N IQ LP EL    SL  L++S+N I   P++I
Sbjct: 203 WLDGNQLNEIPAEMGSMKSLLCVDVSENKIQRLPEELGGLLSLADLLVSQNLIDALPESI 262

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 320
              L  LS LK D N L  +P +   +   L  L L+ N I SLP +     L  L    
Sbjct: 263 -GKLKKLSILKADQNRLTYLP-ESIGNCESLTELVLTENRIQSLPRS--IGKLKRLSNFN 318

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
             R QL   P +I   Q L +  + +N L  IP      T L  LD+S N +  LP  + 
Sbjct: 319 CDRNQLTSLPKEIGGCQALNVFCVRENRLMRIPSELSQATELHVLDVSGNRLPNLP--IS 376

Query: 381 LLEPSLQALRLDGN 394
           L+   L+AL L  N
Sbjct: 377 LITLRLKALWLSVN 390



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 151/336 (44%), Gaps = 43/336 (12%)

Query: 70  SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSG 128
           SL E  +  N L  LP +  +L KL  L L  N+++    E A  ++L  LD+S N +  
Sbjct: 37  SLEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQRLPPEIANFVQLVELDVSRNDIME 96

Query: 129 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 188
           +P  I   T L+    +GNPL                    +RLPE              
Sbjct: 97  IPESISYCTALQVADFSGNPL--------------------TRLPE-------------- 122

Query: 189 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLI 248
           T     ++T   LS+  ++L  +P  I     +  L+L  N +  LP  LS    L+ L 
Sbjct: 123 TFPELRNLTC--LSINDISLQVLPENIGNLTNLVSLELRENLLTFLPESLSMLHRLEELD 180

Query: 249 LSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPEN 307
           L  N++   PD+I   L  L  L LD N L ++P++    +  L  +D+S N I  LPE 
Sbjct: 181 LGNNELYSLPDSI-GHLVGLKDLWLDGNQLNEIPAE-MGSMKSLLCVDVSENKIQRLPEE 238

Query: 308 PPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDL 367
                L  L +L + +  +   P  I +L++L IL   QN L  +PE   N  SLTEL L
Sbjct: 239 --LGGLLSLADLLVSQNLIDALPESIGKLKKLSILKADQNRLTYLPESIGNCESLTELVL 296

Query: 368 SDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           ++N I +LP  +G L+  L     D N L S+ + I
Sbjct: 297 TENRIQSLPRSIGKLK-RLSNFNCDRNQLTSLPKEI 331



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 130/282 (46%), Gaps = 22/282 (7%)

Query: 5   DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 64
           D  GN LT L          LT L  +   L  +PE IG+L+ L+ L+L +N +  +P S
Sbjct: 111 DFSGNPLTRLPETF-PELRNLTCLSINDISLQVLPENIGNLTNLVSLELRENLLTFLPES 169

Query: 65  ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 123
           +S    L E  +GNN L +LP  +G L  L  L L  NQL E   E   ++ L  +D+S 
Sbjct: 170 LSMLHRLEELDLGNNELYSLPDSIGHLVGLKDLWLDGNQLNEIPAEMGSMKSLLCVDVSE 229

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPENEDSEA 180
           N +  LP E+G + +L  LL++ N +  L  S+      ++LK  ++R   LPE+  +  
Sbjct: 230 NKIQRLPEELGGLLSLADLLVSQNLIDALPESIGKLKKLSILKADQNRLTYLPESIGNCE 289

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
           S T                EL L    + ++P  I +   ++  +  RN +  LP E+  
Sbjct: 290 SLT----------------ELVLTENRIQSLPRSIGKLKRLSNFNCDRNQLTSLPKEIGG 333

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           C +L    +  N++   P   L+  + L  L +  N L  +P
Sbjct: 334 CQALNVFCVRENRLMRIPSE-LSQATELHVLDVSGNRLPNLP 374



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 7/190 (3%)

Query: 193 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           R   + +EL L+   L  +P + ++  ++ KL LS N IQ LPPE+++   L  L +SRN
Sbjct: 33  RYERSLEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQRLPPEIANFVQLVELDVSRN 92

Query: 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD--GFKDIPMLQILDLSYNIASLPENPPF 310
            I + P++I +  ++L       NPL ++P      +++  L I D+S  +  LPEN   
Sbjct: 93  DIMEIPESI-SYCTALQVADFSGNPLTRLPETFPELRNLTCLSINDISLQV--LPEN--I 147

Query: 311 SSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
            +L +L  L LR   L   P  +  L +L  LDL  N L S+P+   +L  L +L L  N
Sbjct: 148 GNLTNLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPDSIGHLVGLKDLWLDGN 207

Query: 371 NISALPPELG 380
            ++ +P E+G
Sbjct: 208 QLNEIPAEMG 217



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 82/156 (52%), Gaps = 4/156 (2%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           +DV  NK+  L   L      L +L+ S+NL++ +PE+IG L +L  L   QNR+  +P 
Sbjct: 225 VDVSENKIQRLPEEL-GGLLSLADLLVSQNLIDALPESIGKLKKLSILKADQNRLTYLPE 283

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDL 121
           SI  C SL E  +  N + +LP  +GKL +L   +   NQL     E   CQ  L+V  +
Sbjct: 284 SIGNCESLTELVLTENRIQSLPRSIGKLKRLSNFNCDRNQLTSLPKEIGGCQ-ALNVFCV 342

Query: 122 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 157
             N L  +P E+ + T L  L ++GN L  L  SL+
Sbjct: 343 RENRLMRIPSELSQATELHVLDVSGNRLPNLPISLI 378



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 141/315 (44%), Gaps = 62/315 (19%)

Query: 112 CQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 170
           C   + V+D  + SL  +P EI +   +L +LLL  N LR L           L+K  + 
Sbjct: 10  CNRHVEVVDKRHCSLLYVPDEIYRYERSLEELLLDANQLRDLPKQFFQ-----LVKLRKL 64

Query: 171 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
            L +NE                               +  +P EI    ++ +LD+SRN 
Sbjct: 65  GLSDNE-------------------------------IQRLPPEIANFVQLVELDVSRND 93

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           I E+P  +S C +LQ    S N +   P+     L +L+CL +++  L+ +P +   ++ 
Sbjct: 94  IMEIPESISYCTALQVADFSGNPLTRLPET-FPELRNLTCLSINDISLQVLP-ENIGNLT 151

Query: 291 MLQILDLSYNIAS-LPE--------------NPPFSSLPH-------LQELYLRRMQLRE 328
            L  L+L  N+ + LPE              N    SLP        L++L+L   QL E
Sbjct: 152 NLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPDSIGHLVGLKDLWLDGNQLNE 211

Query: 329 APTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
            P ++  ++ L  +D+S+N +Q +PE    L SL +L +S N I ALP  +G L+  L  
Sbjct: 212 IPAEMGSMKSLLCVDVSENKIQRLPEELGGLLSLADLLVSQNLIDALPESIGKLK-KLSI 270

Query: 389 LRLDGNPLRSIRRTI 403
           L+ D N L  +  +I
Sbjct: 271 LKADQNRLTYLPESI 285



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 1/124 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +S L  + N+LT L  + I +   LTEL+ ++N +  +P +IG L RL   +  +N++ S
Sbjct: 268 LSILKADQNRLTYLPES-IGNCESLTELVLTENRIQSLPRSIGKLKRLSNFNCDRNQLTS 326

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
           +P  I GC +L  F +  N L  +P+EL + ++L  LD+  N+L    +    LRL  L 
Sbjct: 327 LPKEIGGCQALNVFCVRENRLMRIPSELSQATELHVLDVSGNRLPNLPISLITLRLKALW 386

Query: 121 LSNN 124
           LS N
Sbjct: 387 LSVN 390


>gi|26325922|dbj|BAC26715.1| unnamed protein product [Mus musculus]
          Length = 853

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 186/425 (43%), Gaps = 59/425 (13%)

Query: 6   VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
           ++ NKLT L+   I     + EL  + N L  +   I +   L  L+L +N + SIP  I
Sbjct: 327 MDHNKLTFLAVE-IFQLPKIKELHLADNKLEAISPKIENFKELRLLNLDKNLLQSIPKKI 385

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 124
           S C +L    + +N +  LP ++ KL  L  L ++ N++     E   L  + +L+ S N
Sbjct: 386 SHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSNIHILEFSGN 445

Query: 125 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 184
            ++ +P EI     + ++ L  N +      L    +   L +  + + E          
Sbjct: 446 QITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISE---------- 495

Query: 185 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 244
              I +    S     L L    L+     +     +  LDL++N I  +P  +S+  SL
Sbjct: 496 ---IPVDMSFSKQLLHLELNRNKLTVFSKHLCSLTNLEYLDLAKNQIMTIPSCISAMVSL 552

Query: 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL 304
             LILS NK + +P   L SL +L  L +  N L+++P +  K +  +Q L LS NI   
Sbjct: 553 HVLILSDNKFESFPKE-LCSLKNLRVLDISENKLQKIPLEISK-LKRIQKLHLSNNI--- 607

Query: 305 PENPPFSSLP-------HLQELYLRRMQLREA---PTDILRLQQLRILDLSQNSLQSIPE 354
                F++ P        L+EL + +   ++    P ++  + QL+IL++S N+++ IP+
Sbjct: 608 -----FTNFPVELCQRQTLEELNISQTSGKKVTRLPEEVSHMTQLKILNISNNAIKDIPK 662

Query: 355 GFKNLTSLT-----------------------ELDLSDNNISALPPELGLLEPSLQALRL 391
               L SL                         LDL  NN++ALP  +  L  SL+ +  
Sbjct: 663 NIGELRSLVSFYASNNQISSLPSSFLSLEVLQSLDLRGNNMTALPSGIYKLS-SLKEINF 721

Query: 392 DGNPL 396
           D NPL
Sbjct: 722 DDNPL 726



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 171/360 (47%), Gaps = 16/360 (4%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           KN+L  +P+++ SL  L  L+L  N++     S+     L    +  N + +LP E+ +L
Sbjct: 260 KNMLTYIPDSLSSLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNLTGNMIGSLPKEVREL 319

Query: 92  SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
             L +L +  N+L    VE  QL ++  L L++N L  + P+I     LR L L  N L+
Sbjct: 320 KNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAISPKIENFKELRLLNLDKNLLQ 379

Query: 151 TL---RSSLVNGPTPALLKYLRSRLPENEDS-----EASTTKEDLITMATRLSVTS--KE 200
           ++    S  VN  + +L       LP+         +    +  +ITM   +S  S    
Sbjct: 380 SIPKKISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSNIHI 439

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           L   G  ++ +P EI    +IT+++L+ N+I   P  L +  SL  L  + N I + P  
Sbjct: 440 LEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVD 499

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           +  S   L  L+L+ N L  V S     +  L+ LDL+ N I ++P     S++  L  L
Sbjct: 500 MSFS-KQLLHLELNRNKL-TVFSKHLCSLTNLEYLDLAKNQIMTIPS--CISAMVSLHVL 555

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            L   +    P ++  L+ LR+LD+S+N LQ IP     L  + +L LS+N  +  P EL
Sbjct: 556 ILSDNKFESFPKELCSLKNLRVLDISENKLQKIPLEISKLKRIQKLHLSNNIFTNFPVEL 615



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 193/427 (45%), Gaps = 66/427 (15%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
           AS N ++ +P+ +  L  + +L L+ N I ++PS +     L    +G N L+ +P  L 
Sbjct: 212 ASYNEISQIPKELLQLENMRQLLLNSNHIDTLPSGLEHLRYLETLSLGKNMLTYIPDSLS 271

Query: 90  KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
            L  L  L+L  NQL  +    C L +L+ L+L+ N +  LP E+ ++  L  LL+  N 
Sbjct: 272 SLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNLTGNMIGSLPKEVRELKNLESLLMDHNK 331

Query: 149 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN- 207
           L  L   +   P     K     L +N+    S   E+            KEL L  ++ 
Sbjct: 332 LTFLAVEIFQLP-----KIKELHLADNKLEAISPKIENF-----------KELRLLNLDK 375

Query: 208 --LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 265
             L +IP +I     +  L LS N+I+ELP ++    +L+ L ++RNK+    + I + L
Sbjct: 376 NLLQSIPKKISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEI-SHL 434

Query: 266 SSLSCLKLDNNPLRQVPSD------------GFKDI---PM----LQILD-LSYN---IA 302
           S++  L+   N +  VP +             + +I   P+    LQ LD LS+N   I+
Sbjct: 435 SNIHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYIS 494

Query: 303 SLPENPPFS---------------------SLPHLQELYLRRMQLREAPTDILRLQQLRI 341
            +P +  FS                     SL +L+ L L + Q+   P+ I  +  L +
Sbjct: 495 EIPVDMSFSKQLLHLELNRNKLTVFSKHLCSLTNLEYLDLAKNQIMTIPSCISAMVSLHV 554

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401
           L LS N  +S P+   +L +L  LD+S+N +  +P E+  L+  +Q L L  N   +   
Sbjct: 555 LILSDNKFESFPKELCSLKNLRVLDISENKLQKIPLEISKLK-RIQKLHLSNNIFTNFPV 613

Query: 402 TILDRGT 408
            +  R T
Sbjct: 614 ELCQRQT 620



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 179/413 (43%), Gaps = 59/413 (14%)

Query: 43  GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 102
           G L  L  L L +N + SIP  I    +L       N +S +P EL +L  +  L L+SN
Sbjct: 179 GDLLGLEILSLQENGLSSIPLEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSN 238

Query: 103 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP- 160
            +         LR L  L L  N L+ +P  +  +  LR L L  N L     SL   P 
Sbjct: 239 HIDTLPSGLEHLRYLETLSLGKNMLTYIPDSLSSLKNLRILNLEYNQLTIFSKSLCFLPK 298

Query: 161 ------TPALLKYLRSRLPENEDSEASTTKEDLIT-MATRLSV--TSKELSLEGMNLSAI 211
                 T  ++  L   + E ++ E+     + +T +A  +      KEL L    L AI
Sbjct: 299 LNSLNLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAI 358

Query: 212 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI---------- 261
             +I    E+  L+L +N +Q +P ++S C +L++L LS N I++ P  I          
Sbjct: 359 SPKIENFKELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLH 418

Query: 262 ------------LTSLSSLSCLKLDNNPLRQVPSD------------GFKDI---PM--- 291
                       ++ LS++  L+   N +  VP +             + +I   P+   
Sbjct: 419 VNRNKMITMTEEISHLSNIHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLC 478

Query: 292 -LQILD-LSYN---IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
            LQ LD LS+N   I+ +P +  FS    L  L L R +L      +  L  L  LDL++
Sbjct: 479 ALQSLDYLSFNGNYISEIPVDMSFSK--QLLHLELNRNKLTVFSKHLCSLTNLEYLDLAK 536

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           N + +IP     + SL  L LSDN   + P EL  L+ +L+ L +  N L+ I
Sbjct: 537 NQIMTIPSCISAMVSLHVLILSDNKFESFPKELCSLK-NLRVLDISENKLQKI 588



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 130/292 (44%), Gaps = 36/292 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L   GN ++ +  ++  S  +L  L  ++N L    + + SL+ L  LDL +N+I++IPS
Sbjct: 486 LSFNGNYISEIPVDMSFSKQLL-HLELNRNKLTVFSKHLCSLTNLEYLDLAKNQIMTIPS 544

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            IS   SL    + +N   + P EL  L  L  LD+  N+L++  +E  +L R+  L LS
Sbjct: 545 CISAMVSLHVLILSDNKFESFPKELCSLKNLRVLDISENKLQKIPLEISKLKRIQKLHLS 604

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           NN  +  P E+ +  TL +L ++    + +                 +RLPE        
Sbjct: 605 NNIFTNFPVELCQRQTLEELNISQTSGKKV-----------------TRLPEE------- 640

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                ++  T+L +    L++    +  IP  I E   +     S N I  LP    S  
Sbjct: 641 -----VSHMTQLKI----LNISNNAIKDIPKNIGELRSLVSFYASNNQISSLPSSFLSLE 691

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQI 294
            LQ+L L  N +   P  I   LSSL  +  D+NPL + P +  K   M  I
Sbjct: 692 VLQSLDLRGNNMTALPSGIY-KLSSLKEINFDDNPLMRPPMEICKGKEMHMI 742



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 117/264 (44%), Gaps = 48/264 (18%)

Query: 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           LSL+   LS+IP EI     +  L+ S N I ++P EL    +++ L+L+ N I   P  
Sbjct: 187 LSLQENGLSSIPLEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLPSG 246

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-------------------- 300
            L  L  L  L L  N L  +P D    +  L+IL+L YN                    
Sbjct: 247 -LEHLRYLETLSLGKNMLTYIP-DSLSSLKNLRILNLEYNQLTIFSKSLCFLPKLNSLNL 304

Query: 301 ----IASLPENP---------------------PFSSLPHLQELYLRRMQLREAPTDILR 335
               I SLP+                           LP ++EL+L   +L      I  
Sbjct: 305 TGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAISPKIEN 364

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
            ++LR+L+L +N LQSIP+   +  +L  L LSDNNI  LP ++  L+ +L+ L ++ N 
Sbjct: 365 FKELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNIEELPKKIRKLK-NLRQLHVNRNK 423

Query: 396 LRSIRRTILDRGTKAVLKYLKDKI 419
           + ++   I       +L++  ++I
Sbjct: 424 MITMTEEISHLSNIHILEFSGNQI 447


>gi|195486155|ref|XP_002091384.1| GE13624 [Drosophila yakuba]
 gi|194177485|gb|EDW91096.1| GE13624 [Drosophila yakuba]
          Length = 849

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 166/376 (44%), Gaps = 50/376 (13%)

Query: 11  LTVLSNNL------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 64
           L V SNNL      I S   L  L  ++NL+  +PE I S   L  LDL  N +  +P +
Sbjct: 68  LHVNSNNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDA 127

Query: 65  ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 123
           I+   SL E  +    L  LPA  G+L  L  L+L  N L        +L  L  LD+  
Sbjct: 128 ITSLISLQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGG 187

Query: 124 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183
           N  + LP  +G++ +LR+L +  N +R + +++              +L + +  EA+  
Sbjct: 188 NEFTELPEVVGELKSLRELWIDFNQIRRVSANI-------------GKLRDLQHFEANGN 234

Query: 184 KEDLITMATRLS--VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 241
             D  T+ + LS     + LS+   +L A P  +     +  L    N + ELP  +S  
Sbjct: 235 LLD--TLPSELSNWRNVEVLSICSNSLEAFPFSVGMLKSLVTLKCESNGLTELPDSISYL 292

Query: 242 ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI 301
             L+ L+LS NK+   P  I   L SL  L  D+N LRQ+P D       L +L ++ N 
Sbjct: 293 EQLEELVLSHNKLIRLPSTI-GMLRSLRFLFADDNQLRQLP-DELCSCQQLSVLSVANN- 349

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
                                  QL   P +I  L ++++L++  N + ++P    NL +
Sbjct: 350 -----------------------QLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVN 386

Query: 362 LTELDLSDNNISALPP 377
           LT + LSDN    L P
Sbjct: 387 LTSMWLSDNQSQPLVP 402



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 101/192 (52%), Gaps = 7/192 (3%)

Query: 214 EIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
           E+W+    + +L LS   +Q LPP+L  C  L+ L ++ N ++  P AI  SL  L  L 
Sbjct: 34  EVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLESIPQAI-GSLRQLQHLD 92

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 331
           L+ N +  VP +  K    L  LDLS N +  LP+    +SL  LQEL L    L   P 
Sbjct: 93  LNRNLIVNVPEE-IKSCKHLTHLDLSCNSLQRLPD--AITSLISLQELLLNETYLEFLPA 149

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           +  RL  LRIL+L  N+L ++P+    L +L  LD+  N  + LP  +G L+ SL+ L +
Sbjct: 150 NFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELPEVVGELK-SLRELWI 208

Query: 392 DGNPLRSIRRTI 403
           D N +R +   I
Sbjct: 209 DFNQIRRVSANI 220



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 153/353 (43%), Gaps = 61/353 (17%)

Query: 28  LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 87
           L  + N L  +P+ IGSL +L  LDL++N I+++P  I  C  L    +  N+L  LP  
Sbjct: 68  LHVNSNNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDA 127

Query: 88  LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 147
           +  L                      + L  L L+   L  LP   G++  LR L L  N
Sbjct: 128 ITSL----------------------ISLQELLLNETYLEFLPANFGRLVNLRILELRLN 165

Query: 148 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 207
            L TL  S+V      L+   R  +  NE +E      +L ++        +EL ++   
Sbjct: 166 NLMTLPKSMVR-----LINLQRLDIGGNEFTELPEVVGELKSL--------RELWIDFNQ 212

Query: 208 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
           +  + + I +  ++   + + N +  LP ELS+  +++ L +  N ++ +P ++   L S
Sbjct: 213 IRRVSANIGKLRDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNSLEAFPFSV-GMLKS 271

Query: 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR 327
           L  LK ++N L ++P                            S L  L+EL L   +L 
Sbjct: 272 LVTLKCESNGLTELPDS-------------------------ISYLEQLEELVLSHNKLI 306

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
             P+ I  L+ LR L    N L+ +P+   +   L+ L +++N +SALP  +G
Sbjct: 307 RLPSTIGMLRSLRFLFADDNQLRQLPDELCSCQQLSVLSVANNQLSALPQNIG 359



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 2/129 (1%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L  E N LT L ++ I+    L EL+ S N L  +P TIG L  L  L    N++  +P 
Sbjct: 275 LKCESNGLTELPDS-ISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPD 333

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            +  C  L+   + NN LSALP  +G LSK+  L++ +N +    V    L  L+ + LS
Sbjct: 334 ELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNLTSMWLS 393

Query: 123 NNSLSGLPP 131
           +N    L P
Sbjct: 394 DNQSQPLVP 402



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 15/106 (14%)

Query: 281 VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPH-------LQELYLRRMQLREAPTDI 333
            P   FK   ++  LD S        N P +  P        L+ELYL   +L+  P  +
Sbjct: 8   FPCFKFKREEVIDKLDYS--------NTPLTDFPEVWQHERTLEELYLSTTRLQALPPQL 59

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
              Q LR+L ++ N+L+SIP+   +L  L  LDL+ N I  +P E+
Sbjct: 60  FYCQGLRVLHVNSNNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEI 105


>gi|324500178|gb|ADY40092.1| Protein lap1 [Ascaris suum]
          Length = 1428

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 171/382 (44%), Gaps = 42/382 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD     L  + N++  +   L E     N +  + + +    +L  L L +N I+ +P+
Sbjct: 18  LDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEIIRVPT 77

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I+    L E  +  N +S LP E+ + ++L  LDL SN +         L  ++ L L+
Sbjct: 78  DIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMTHLGLN 137

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           + SL+ +P +IG +  LR L +  N LRT+  S+                          
Sbjct: 138 DISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQ------------------------ 173

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                +T   RL +   E       L  +PSEI     + +L + +N ++ LP  +  C 
Sbjct: 174 -----LTQLQRLDLGHNE-------LDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCR 221

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           SLQ L +S NK+   PD I   L  L+ L + +N L+ +P+     +  L IL +  N I
Sbjct: 222 SLQQLDVSENKLMVLPDDI-GDLEQLNDLTVSHNCLQVLPT-SVGHLKKLAILKVDRNAI 279

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
             L   P   S   L ELYL    L E PT +  L+ LR L+L +N L+ IP       S
Sbjct: 280 TQL--TPAVGSCTALSELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCIS 337

Query: 362 LTELDLSDNNISALPPELGLLE 383
           L+ L L DN +  LP E+G LE
Sbjct: 338 LSVLSLRDNLLEQLPLEIGRLE 359



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 165/358 (46%), Gaps = 40/358 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           IA+   L EL    N ++ +PE I   ++L  LDL  N I  +P +I+   S+    + +
Sbjct: 79  IANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMTHLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ +P ++G L  L +L++  N L+       QL +L  LDL +N L  LP EIG ++
Sbjct: 139 ISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEIGLLS 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L++L +  N L  L  S+V   +   L    ++L             D I    +L+  
Sbjct: 199 NLQELYVDQNDLEALPESIVQCRSLQQLDVSENKL---------MVLPDDIGDLEQLN-- 247

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             +L++    L  +P+ +    ++  L + RN+I +L P + SC +L  L L+ N + + 
Sbjct: 248 --DLTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTEV 305

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P + L +L +L  L LD N L+++PS                                L 
Sbjct: 306 PTS-LGNLKALRTLNLDKNQLKEIPST-------------------------IGGCISLS 339

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
            L LR   L + P +I RL+ LR+LD+  N L  +P     L +L  L LS++   A+
Sbjct: 340 VLSLRDNLLEQLPLEIGRLENLRVLDVCNNRLNFLPFTINVLFNLQALWLSESQSQAM 397



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 4/154 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LDV  NKL VL ++ I     L +L  S N L  +P ++G L +L  L + +N I  
Sbjct: 223 LQQLDVSENKLMVLPDD-IGDLEQLNDLTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQ 281

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSV 118
           +  ++  C +L+E Y+  N L+ +P  LG L  L TL+L  NQLKE    +  C + LSV
Sbjct: 282 LTPAVGSCTALSELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGC-ISLSV 340

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L L +N L  LP EIG++  LR L +  N L  L
Sbjct: 341 LSLRDNLLEQLPLEIGRLENLRVLDVCNNRLNFL 374



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 131/280 (46%), Gaps = 16/280 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N +T L    I   T +T L  +   L  MP  IG L  L  L++ +N + +IP 
Sbjct: 111 LDLSSNPITRLPPT-ITLLTSMTHLGLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPP 169

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           SIS    L    +G+N L  LP+E+G LS L  L +  N L+       Q R L  LD+S
Sbjct: 170 SISQLTQLQRLDLGHNELDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVS 229

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L  LP +IG +  L  L ++ N L+ L +S+ +    A+LK          D  A T
Sbjct: 230 ENKLMVLPDDIGDLEQLNDLTVSHNCLQVLPTSVGHLKKLAILKV---------DRNAIT 280

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                +   T LS    EL L    L+ +P+ +     +  L+L +N ++E+P  +  C 
Sbjct: 281 QLTPAVGSCTALS----ELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCI 336

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           SL  L L  N ++  P  I   L +L  L + NN L  +P
Sbjct: 337 SLSVLSLRDNLLEQLPLEI-GRLENLRVLDVCNNRLNFLP 375


>gi|421099998|ref|ZP_15560640.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796979|gb|EKR99096.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 310

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 110/205 (53%), Gaps = 4/205 (1%)

Query: 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWP 258
           ++L L+G  L+ +P +I    E+  L L  N ++ LP E+    +L+ L LS NK+   P
Sbjct: 68  QKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQLKTLPKEIGQLQNLRVLGLSHNKLTSLP 127

Query: 259 DAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQE 318
             I   L  L  L LD+N LR +P D  K   + ++L  +  +  LP++     L  LQ 
Sbjct: 128 KDI-GQLQKLQRLHLDDNQLRTLPKDIGKLQKLRELLLYNNQLTMLPKD--IGQLQKLQR 184

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           L+L   QLR  P DI +LQ LR+L L  N L ++P+    L +L  LDL  N ++ LP +
Sbjct: 185 LHLGDNQLRTLPKDIGKLQNLRVLKLDSNQLATLPKDIGKLQNLQVLDLGGNQLATLPKD 244

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTI 403
           +G L+ +LQ L L+G    +I + I
Sbjct: 245 IGKLQ-NLQKLHLNGYEFTTIPKEI 268



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 129/273 (47%), Gaps = 42/273 (15%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           LDL  N++ ++P  I    +L + Y+  N L+ LP ++G L +L  L L+ NQLK    E
Sbjct: 47  LDLTNNQLTTLPKDIGKLQNLQKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQLKTLPKE 106

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
             QL+ L VL LS+N L+ LP +IG++  L++L L  N LRTL   +        L+ LR
Sbjct: 107 IGQLQNLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPKDI------GKLQKLR 160

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
                                         EL L    L+ +P +I +  ++ +L L  N
Sbjct: 161 ------------------------------ELLLYNNQLTMLPKDIGQLQKLQRLHLGDN 190

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
            ++ LP ++    +L+ L L  N++   P  I   L +L  L L  N L  +P D  K +
Sbjct: 191 QLRTLPKDIGKLQNLRVLKLDSNQLATLPKDI-GKLQNLQVLDLGGNQLATLPKDIGK-L 248

Query: 290 PMLQILDLS-YNIASLPENPPFSSLPHLQELYL 321
             LQ L L+ Y   ++P+      L  LQELYL
Sbjct: 249 QNLQKLHLNGYEFTTIPKE--IGQLQKLQELYL 279



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 87/175 (49%), Gaps = 23/175 (13%)

Query: 1   MSKLDVEGNKLTVLSNNL----------------------IASWTMLTELIASKNLLNGM 38
           + KL ++GN+LT L  ++                      I     L  L  S N L  +
Sbjct: 67  LQKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQLKTLPKEIGQLQNLRVLGLSHNKLTSL 126

Query: 39  PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 98
           P+ IG L +L RL L  N++ ++P  I     L E  + NN L+ LP ++G+L KL  L 
Sbjct: 127 PKDIGQLQKLQRLHLDDNQLRTLPKDIGKLQKLRELLLYNNQLTMLPKDIGQLQKLQRLH 186

Query: 99  LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L  NQL+    +  +L+ L VL L +N L+ LP +IGK+  L+ L L GN L TL
Sbjct: 187 LGDNQLRTLPKDIGKLQNLRVLKLDSNQLATLPKDIGKLQNLQVLDLGGNQLATL 241



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 2/145 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L ++ N+L  L  + I     L EL+   N L  +P+ IG L +L RL L  N++ +
Sbjct: 136 LQRLHLDDNQLRTLPKD-IGKLQKLRELLLYNNQLTMLPKDIGQLQKLQRLHLGDNQLRT 194

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +P  I    +L    + +N L+ LP ++GKL  L  LDL  NQL     +  +L+ L  L
Sbjct: 195 LPKDIGKLQNLRVLKLDSNQLATLPKDIGKLQNLQVLDLGGNQLATLPKDIGKLQNLQKL 254

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLL 144
            L+    + +P EIG++  L++L L
Sbjct: 255 HLNGYEFTTIPKEIGQLQKLQELYL 279



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 69/111 (62%), Gaps = 4/111 (3%)

Query: 294 ILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSI 352
           ILDL+ N + +LP++     L +LQ+LYL   QL   P DI  L++L++L L  N L+++
Sbjct: 46  ILDLTNNQLTTLPKD--IGKLQNLQKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQLKTL 103

Query: 353 PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           P+    L +L  L LS N +++LP ++G L+  LQ L LD N LR++ + I
Sbjct: 104 PKEIGQLQNLRVLGLSHNKLTSLPKDIGQLQ-KLQRLHLDDNQLRTLPKDI 153


>gi|363736689|ref|XP_003641743.1| PREDICTED: leucine-rich repeat-containing protein 7 [Gallus gallus]
          Length = 1455

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 183/390 (46%), Gaps = 62/390 (15%)

Query: 35  LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 93
           L  +P+ + +  R L  L L  N+I  +P  +  C +L +  + +N LS+LP  +  L  
Sbjct: 34  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVN 93

Query: 94  LGTLDLHSNQLKEY--CVEACQ----------------------LRLSVLDLSNNSLSGL 129
           L  LD+  N ++++   ++ C+                      L L+ L L++  L  L
Sbjct: 94  LRELDISKNGIQDFPENIKCCKCLTIIEASVNPVSKLPDGFTQLLNLTQLYLNDAFLEFL 153

Query: 130 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 189
           P   G++  LR L L  N L+TL  S+       L +  R  L  NE SE     E +  
Sbjct: 154 PANFGRLVKLRILELRENHLKTLPKSMHK-----LTQLERLDLGNNEFSELPEVLEQIQN 208

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
           +        KEL ++  +L  +P  I +  ++  LD+S+N I+ +  ++S C  L+ L+L
Sbjct: 209 L--------KELWMDNNSLQILPGSIGKLKQLVYLDMSKNRIETVDLDISGCEGLEDLLL 260

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 308
           S N ++  PD+I   L  L+ LK+D+N L  +P +   ++ +L+  D S N + SLP   
Sbjct: 261 SSNMLQQLPDSI-GLLKRLTTLKVDDNQLTILP-NAIGNLSLLEEFDCSCNELESLPSTI 318

Query: 309 PF-----------SSLPHLQE----------LYLRRMQLREAPTDILRLQQLRILDLSQN 347
            +           + LP L            + LR  +L   P +I ++Q+LR+L+LS N
Sbjct: 319 GYLHNLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDN 378

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L+++P  F  L  L  L LSDN   AL P
Sbjct: 379 RLKNLPFTFTKLKELAALWLSDNQSKALIP 408



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 105/199 (52%), Gaps = 7/199 (3%)

Query: 201 LSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           L      L  +P E++     + +L L  N I+ELP +L +C +L+ L +  N +   P 
Sbjct: 27  LDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPT 86

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 318
            I  SL +L  L +  N ++  P +  K    L I++ S N ++ LP+   F+ L +L +
Sbjct: 87  TI-ASLVNLRELDISKNGIQDFP-ENIKCCKCLTIIEASVNPVSKLPDG--FTQLLNLTQ 142

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           LYL    L   P +  RL +LRIL+L +N L+++P+    LT L  LDL +N  S LP  
Sbjct: 143 LYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEV 202

Query: 379 LGLLEPSLQALRLDGNPLR 397
           L  ++ +L+ L +D N L+
Sbjct: 203 LEQIQ-NLKELWMDNNSLQ 220



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 119/247 (48%), Gaps = 17/247 (6%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           +N L  +P+++  L++L RLDL  N    +P  +    +L E +M NN+L  LP  +GKL
Sbjct: 170 ENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNSLQILPGSIGKL 229

Query: 92  SKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
            +L  LD+  N+++  +  +  C+  L  L LS+N L  LP  IG +  L  L +  N L
Sbjct: 230 KQLVYLDMSKNRIETVDLDISGCE-GLEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQL 288

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
             L +++ N      L  L       E+ + S  + + +          + L+++   L 
Sbjct: 289 TILPNAIGN------LSLL-------EEFDCSCNELESLPSTIGYLHNLRTLAVDENFLP 335

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P EI     +T + L  N ++ LP E+     L+ L LS N++K+ P    T L  L+
Sbjct: 336 ELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLP-FTFTKLKELA 394

Query: 270 CLKLDNN 276
            L L +N
Sbjct: 395 ALWLSDN 401



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 99/190 (52%), Gaps = 9/190 (4%)

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
           T +EL L+   +  +P +++    + KL +  N +  LP  ++S  +L+ L +S+N I+D
Sbjct: 47  TLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVNLRELDISKNGIQD 106

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASL---PENPPFSSL 313
           +P+ I      L+ ++   NP+ ++P DGF    +L +  L  N A L   P N  F  L
Sbjct: 107 FPENI-KCCKCLTIIEASVNPVSKLP-DGFTQ--LLNLTQLYLNDAFLEFLPAN--FGRL 160

Query: 314 PHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNIS 373
             L+ L LR   L+  P  + +L QL  LDL  N    +PE  + + +L EL + +N++ 
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNSLQ 220

Query: 374 ALPPELGLLE 383
            LP  +G L+
Sbjct: 221 ILPGSIGKLK 230



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 140/312 (44%), Gaps = 62/312 (19%)

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           C    +  +SVLD S+  L  +P E+     TL +L L  N +  L   L N       +
Sbjct: 16  CFRGEEEIVSVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN------CQ 69

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
            LR                              +LS+   +LS++P+ I     + +LD+
Sbjct: 70  ALR------------------------------KLSIPDNDLSSLPTTIASLVNLRELDI 99

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S+N IQ+ P  +  C  L  +  S N +   PD   T L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQDFPENIKCCKCLTIIEASVNPVSKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 287 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLP-------HLQELYLRRM 324
             +  L+IL+L  N + +LP+              N  FS LP       +L+EL++   
Sbjct: 158 GRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNN 217

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
            L+  P  I +L+QL  LD+S+N ++++         L +L LS N +  LP  +GLL+ 
Sbjct: 218 SLQILPGSIGKLKQLVYLDMSKNRIETVDLDISGCEGLEDLLLSSNMLQQLPDSIGLLK- 276

Query: 385 SLQALRLDGNPL 396
            L  L++D N L
Sbjct: 277 RLTTLKVDDNQL 288



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 38/256 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ + L   ++     L EL    N L  +P +IG L +L+ LD+ +NRI +
Sbjct: 186 LERLDLGNNEFSELPE-VLEQIQNLKELWMDNNSLQILPGSIGKLKQLVYLDMSKNRIET 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +   ISGC  L +  + +N L  LP  +G L +L TL +  NQL         L  L   
Sbjct: 245 VDLDISGCEGLEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTILPNAIGNLSLLEEF 304

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D S N L  LP  IG +  LR L +  N L            P L + + S         
Sbjct: 305 DCSCNELESLPSTIGYLHNLRTLAVDENFL------------PELPREIGS--------- 343

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                         ++V    +SL    L  +P EI +  ++  L+LS N ++ LP   +
Sbjct: 344 -----------CKNVTV----MSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPFTFT 388

Query: 240 SCASLQTLILSRNKIK 255
               L  L LS N+ K
Sbjct: 389 KLKELAALWLSDNQSK 404


>gi|320162887|gb|EFW39786.1| protein kinase C delta-PA [Capsaspora owczarzaki ATCC 30864]
          Length = 1301

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 202/436 (46%), Gaps = 62/436 (14%)

Query: 14  LSNNLIA------SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 67
           L+ NLI+      ++  +T +    N L   P  + S+  L  +DL +N+I +IP  IS 
Sbjct: 222 LAKNLISPLQDYSAFKTMTRIQLIDNNLQEFPTGLFSVPSLSEIDLSRNQIRAIPPGISK 281

Query: 68  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------------- 114
             +L    + NN LS LP EL  L+KL TL L  N         CQL             
Sbjct: 282 LSNLRILAVHNNQLSTLPNELSTLNKLTTLVLAFNDFATLPPVICQLVELHQLILTSNAL 341

Query: 115 -----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN----- 158
                      +L++LD+  N LS LP  + ++ +L ++ +  NPL+     L N     
Sbjct: 342 EVLPDGIGNLTKLTLLDVRFNKLSSLPASMSRLVSLTRIDIRQNPLQQFPPVLANLPKLE 401

Query: 159 ----GP-----TPAL---LKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 205
               GP      PAL   L  L++ R PE      + T   L  M T++++T        
Sbjct: 402 TLDIGPNNFARAPALDVALPALKTIRAPEAFLGSLNFTV--LPQMLTKINLTDN------ 453

Query: 206 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 265
             L+++P  I +   +  L +  N ++ LP ++ +  +L+ L  + N+I+  P+     L
Sbjct: 454 -GLTSLPEAIGDLPNLESLIVKNNQLRSLPAKIFAIPTLKWLYAAYNQIEVLPEKFAKCL 512

Query: 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNI-ASLPENPPFSSLPHLQELYLRRM 324
             +   ++ +N L+++P    K   M ++L++S N+   LP       L  ++ELY+ + 
Sbjct: 513 --IQIFEVQHNRLQKLPDKLLKFCYMTRVLNVSNNMLTELPALSDTDELNAVEELYVGQN 570

Query: 325 QLREAPTD-ILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE 383
           +L +A  D I  + +LRILD+S N L ++      LT L  L+++ N ++ LP  +  L+
Sbjct: 571 RLNDAQVDKITGMLKLRILDVSYNGLTAVSGNISRLTELGTLNVAGNKLTELPRSINRLK 630

Query: 384 PSLQALRLDGNPLRSI 399
             L+ +  + N LR +
Sbjct: 631 -KLKYVLANSNKLRDL 645



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 168/358 (46%), Gaps = 49/358 (13%)

Query: 26  TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 85
           T L  +KNL++ + +   +   + R+ L  N +   P+ +    SL+E  +  N + A+P
Sbjct: 218 TALELAKNLISPL-QDYSAFKTMTRIQLIDNNLQEFPTGLFSVPSLSEIDLSRNQIRAIP 276

Query: 86  AELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 144
             + KLS L  L +H+NQL     E   L +L+ L L+ N  + LPP I ++  L +L+L
Sbjct: 277 PGISKLSNLRILAVHNNQLSTLPNELSTLNKLTTLVLAFNDFATLPPVICQLVELHQLIL 336

Query: 145 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 204
           T N L  L                                 D I   T+L++    L + 
Sbjct: 337 TSNALEVL--------------------------------PDGIGNLTKLTL----LDVR 360

Query: 205 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 264
              LS++P+ +     +T++D+ +N +Q+ PP L++   L+TL +  N     P A+  +
Sbjct: 361 FNKLSSLPASMSRLVSLTRIDIRQNPLQQFPPVLANLPKLETLDIGPNNFARAP-ALDVA 419

Query: 265 LSSLSCLKLDNNPLRQVPSDGFKDIP-MLQILDLSYN-IASLPENPPFSSLPHLQELYLR 322
           L +L  ++    P   + S  F  +P ML  ++L+ N + SLPE      LP+L+ L ++
Sbjct: 420 LPALKTIRA---PEAFLGSLNFTVLPQMLTKINLTDNGLTSLPE--AIGDLPNLESLIVK 474

Query: 323 RMQLREAPTDILRLQQLRILDLSQNSLQSIPEGF-KNLTSLTELDLSDNNISALPPEL 379
             QLR  P  I  +  L+ L  + N ++ +PE F K L  + E  +  N +  LP +L
Sbjct: 475 NNQLRSLPAKIFAIPTLKWLYAAYNQIEVLPEKFAKCLIQIFE--VQHNRLQKLPDKL 530



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 185/421 (43%), Gaps = 78/421 (18%)

Query: 9   NKLT--VLSNN-------LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 59
           NKLT  VL+ N       +I     L +LI + N L  +P+ IG+L++L  LD+  N++ 
Sbjct: 306 NKLTTLVLAFNDFATLPPVICQLVELHQLILTSNALEVLPDGIGNLTKLTLLDVRFNKLS 365

Query: 60  SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK-----EYCVEACQ- 113
           S+P+S+S   SL    +  N L   P  L  L KL TLD+  N        +  + A + 
Sbjct: 366 SLPASMSRLVSLTRIDIRQNPLQQFPPVLANLPKLETLDIGPNNFARAPALDVALPALKT 425

Query: 114 ----------LRLSVL-------DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
                     L  +VL       +L++N L+ LP  IG +  L  L++  N LR+L + +
Sbjct: 426 IRAPEAFLGSLNFTVLPQMLTKINLTDNGLTSLPEAIGDLPNLESLIVKNNQLRSLPAKI 485

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
              PT   LK+L +                                    N   +  E +
Sbjct: 486 FAIPT---LKWLYA----------------------------------AYNQIEVLPEKF 508

Query: 217 EAGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKDWPDAILTS-LSSLSCLKLD 274
               I   ++  N +Q+LP + L  C   + L +S N + + P    T  L+++  L + 
Sbjct: 509 AKCLIQIFEVQHNRLQKLPDKLLKFCYMTRVLNVSNNMLTELPALSDTDELNAVEELYVG 568

Query: 275 NNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
            N L     D    +  L+ILD+SYN + ++  N   S L  L  L +   +L E P  I
Sbjct: 569 QNRLNDAQVDKITGMLKLRILDVSYNGLTAVSGN--ISRLTELGTLNVAGNKLTELPRSI 626

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393
            RL++L+ +  + N L+ +P   +   SL  LDL  N ++A+P  +  L P L+ L + G
Sbjct: 627 NRLKKLKYVLANSNKLRDLPPLPE---SLVHLDLGCNRLAAIPASVRAL-PVLELLDVSG 682

Query: 394 N 394
           N
Sbjct: 683 N 683



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 29/156 (18%)

Query: 224 LDLSRNSIQELPPEL--SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQV 281
           ++L++ S++ LP ++  S  A+   L L++N I    D   ++  +++ ++L +N L++ 
Sbjct: 195 VNLAQRSLEALPADVLTSKAATTTALELAKNLISPLQD--YSAFKTMTRIQLIDNNLQEF 252

Query: 282 PSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRI 341
           P+  F                         S+P L E+ L R Q+R  P  I +L  LRI
Sbjct: 253 PTGLF-------------------------SVPSLSEIDLSRNQIRAIPPGISKLSNLRI 287

Query: 342 LDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377
           L +  N L ++P     L  LT L L+ N+ + LPP
Sbjct: 288 LAVHNNQLSTLPNELSTLNKLTTLVLAFNDFATLPP 323



 Score = 38.5 bits (88), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 4/132 (3%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP--ETIGSLSRLIRLDLHQNRILSI 61
            +V+ N+L  L + L+    M   L  S N+L  +P       L+ +  L + QNR+   
Sbjct: 516 FEVQHNRLQKLPDKLLKFCYMTRVLNVSNNMLTELPALSDTDELNAVEELYVGQNRLNDA 575

Query: 62  P-SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120
               I+G   L    +  N L+A+   + +L++LGTL++  N+L E      +L+     
Sbjct: 576 QVDKITGMLKLRILDVSYNGLTAVSGNISRLTELGTLNVAGNKLTELPRSINRLKKLKYV 635

Query: 121 LSN-NSLSGLPP 131
           L+N N L  LPP
Sbjct: 636 LANSNKLRDLPP 647


>gi|75076353|sp|Q4R6F0.1|LRRD1_MACFA RecName: Full=Leucine-rich repeat and death domain-containing
           protein 1
 gi|67969956|dbj|BAE01325.1| unnamed protein product [Macaca fascicularis]
          Length = 863

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 177/382 (46%), Gaps = 17/382 (4%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           KN L  +P+T+ SL  L  L+L  N++   P ++     L    +  N +S+LP E+ +L
Sbjct: 269 KNKLRHIPDTLPSLKYLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIREL 328

Query: 92  SKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
             L TL L  N+L    VE  Q L++  L L++N L  +  +I     LR L+L  N L+
Sbjct: 329 KNLETLLLDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNLLK 388

Query: 151 TLRSSLVNGPTPALLKYLRSRLPE--------NEDSEASTTKEDLITMATRLSVTSKELS 202
            +   +        L    ++L E        N   +    + +++ +   +S  +   S
Sbjct: 389 NIPEKICCCAMLECLTLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSISHLNNICS 448

Query: 203 LE--GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           LE  G  ++ IP EI    +I K++L+ N I   P  L +  SL  L ++ N I + P  
Sbjct: 449 LEFSGNIIAGIPIEIKNCQKIIKIELNYNKIMYFPLGLCALDSLYYLSVNGNYISEIPAD 508

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I  S   L  L+L  N L  + S+ F  +  L+ LDL  N I  +P     S++  L  L
Sbjct: 509 ISFS-KQLLHLELSENKLL-IFSEHFCSLINLKYLDLGKNQIKKIP--ASISNMISLHVL 564

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            L   +    P ++  L+ LR+LDLS+N LQ I     NL  + +L+ S N     P EL
Sbjct: 565 ILCCNKFETFPRELCTLENLRVLDLSENQLQKISSDICNLKRIQKLNFSSNQFIHFPIEL 624

Query: 380 GLLEPSLQALRLDGNPLRSIRR 401
             L+ SL+ L +     R + R
Sbjct: 625 CQLQ-SLEQLNISQIKGRKLTR 645



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 172/376 (45%), Gaps = 20/376 (5%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
            S N ++ +P+ I  L  + +L  + N I + PS +    +L    +G N L  +P  L 
Sbjct: 221 VSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDTLP 280

Query: 90  KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
            L  L  L+L  NQL  +    C L +L  LDL+ N +S LP EI ++  L  LLL  N 
Sbjct: 281 SLKYLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLLDHNK 340

Query: 149 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 208
           L  L   +       LLK    +L +N+    S   E+   +  R+ +  K L      L
Sbjct: 341 LTFLAVEIF-----QLLKIKELQLADNKLEVISHKIENFREL--RILILDKNL------L 387

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
             IP +I     +  L LS N + ELP  +    +L+ L ++RN +    D+I + L+++
Sbjct: 388 KNIPEKICCCAMLECLTLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSI-SHLNNI 446

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 327
             L+   N +  +P +  K+   +  ++L+YN I   P      +L  L  L +    + 
Sbjct: 447 CSLEFSGNIIAGIPIE-IKNCQKIIKIELNYNKIMYFP--LGLCALDSLYYLSVNGNYIS 503

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
           E P DI   +QL  L+LS+N L    E F +L +L  LDL  N I  +P  +  +  SL 
Sbjct: 504 EIPADISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNM-ISLH 562

Query: 388 ALRLDGNPLRSIRRTI 403
            L L  N   +  R +
Sbjct: 563 VLILCCNKFETFPREL 578



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 169/359 (47%), Gaps = 26/359 (7%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I    ML  L  S N L  +P+ I  L+ L +L +++N ++ I  SIS   ++       
Sbjct: 394 ICCCAMLECLTLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSISHLNNICSLEFSG 453

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++ +P E+    K+  ++L+ N++  + +  C L  L  L ++ N +S +P +I    
Sbjct: 454 NIIAGIPIEIKNCQKIIKIELNYNKIMYFPLGLCALDSLYYLSVNGNYISEIPADISFSK 513

Query: 138 TLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            L  L L+ N L        SL+N      LKYL   L +N+  +   +  ++I++   +
Sbjct: 514 QLLHLELSENKLLIFSEHFCSLIN------LKYL--DLGKNQIKKIPASISNMISLHVLI 565

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
              +K            P E+     +  LDLS N +Q++  ++ +   +Q L  S N+ 
Sbjct: 566 LCCNK--------FETFPRELCTLENLRVLDLSENQLQKISSDICNLKRIQKLNFSSNQF 617

Query: 255 KDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
             +P  +  L SL  L+  ++    L ++P +   ++  L+ LD+S N I  +P N    
Sbjct: 618 IHFPIELCQLQSLEQLNISQIKGRKLTRLPGE-LSNMTQLKELDISNNAIREIPRN--IG 674

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
            L +L  L+    Q+   P  +L L  L+ L+LS N+L ++P    NL SL E++  DN
Sbjct: 675 ELRNLVSLHAYNNQISYIPPSLLSLNDLQQLNLSGNNLTALPSAIYNLFSLKEINFDDN 733



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 123/280 (43%), Gaps = 36/280 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L V GN ++ +  ++  S  +L  L  S+N L    E   SL  L  LDL +N+I  IP+
Sbjct: 495 LSVNGNYISEIPADISFSKQLL-HLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPA 553

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
           SIS   SL    +  N     P EL  L  L  LDL  NQL++   + C L R+  L+ S
Sbjct: 554 SISNMISLHVLILCCNKFETFPRELCTLENLRVLDLSENQLQKISSDICNLKRIQKLNFS 613

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N     P E+ ++ +L +L ++    R L                 +RLP         
Sbjct: 614 SNQFIHFPIELCQLQSLEQLNISQIKGRKL-----------------TRLPGE------- 649

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                ++  T+L    KEL +    +  IP  I E   +  L    N I  +PP L S  
Sbjct: 650 -----LSNMTQL----KELDISNNAIREIPRNIGELRNLVSLHAYNNQISYIPPSLLSLN 700

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
            LQ L LS N +   P AI  +L SL  +  D+NPL + P
Sbjct: 701 DLQQLNLSGNNLTALPSAIY-NLFSLKEINFDDNPLLRPP 739



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 143/315 (45%), Gaps = 38/315 (12%)

Query: 111 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 170
            C+   +V +L    L   P +I K+  ++ L L  N ++T + +     +  LL     
Sbjct: 142 TCKDNFTV-NLEAKGLQEFPKDILKIKYVKHLYLDKNQIKTFQGA----DSGDLLGLEIL 196

Query: 171 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
            L EN  S   +     I +   L +    L++   ++S IP EI + G I +L    N 
Sbjct: 197 SLQENGLSSLPSE----IQLLHNLRI----LNVSHNHISHIPKEISQLGNIRQLFFYNNY 248

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           I+  P +L    +L+ L L +NK++  PD  L SL  L  L L+ N L   P      +P
Sbjct: 249 IENFPSDLECLGNLEILSLGKNKLRHIPDT-LPSLKYLRVLNLEYNQLTIFPK-ALCFLP 306

Query: 291 MLQILDLSYN-IASLPENP----------------PFSSLPHLQELYLRRMQLREAPTDI 333
            L  LDL+ N I+SLP+                   F ++   Q L ++ +QL +   ++
Sbjct: 307 KLISLDLTGNLISSLPKEIRELKNLETLLLDHNKLTFLAVEIFQLLKIKELQLADNKLEV 366

Query: 334 L-----RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
           +       ++LRIL L +N L++IPE       L  L LSDN ++ LP  +  L  +L+ 
Sbjct: 367 ISHKIENFRELRILILDKNLLKNIPEKICCCAMLECLTLSDNKLTELPKNIHKLN-NLRK 425

Query: 389 LRLDGNPLRSIRRTI 403
           L ++ N +  I  +I
Sbjct: 426 LHVNRNNMVKITDSI 440



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 1/108 (0%)

Query: 6   VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 65
           ++G KLT L   L ++ T L EL  S N +  +P  IG L  L+ L  + N+I  IP S+
Sbjct: 638 IKGRKLTRLPGEL-SNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQISYIPPSL 696

Query: 66  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 113
                L +  +  N L+ALP+ +  L  L  ++   N L    +E C+
Sbjct: 697 LSLNDLQQLNLSGNNLTALPSAIYNLFSLKEINFDDNPLLRPPMEICK 744


>gi|324501497|gb|ADY40666.1| Protein lap1 [Ascaris suum]
          Length = 1224

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 171/382 (44%), Gaps = 42/382 (10%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD     L  + N++  +   L E     N +  + + +    +L  L L +N I+ +P+
Sbjct: 18  LDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEIIRVPT 77

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 122
            I+    L E  +  N +S LP E+ + ++L  LDL SN +         L  ++ L L+
Sbjct: 78  DIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMTHLGLN 137

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           + SL+ +P +IG +  LR L +  N LRT+  S+                          
Sbjct: 138 DISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQ------------------------ 173

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                +T   RL +   E       L  +PSEI     + +L + +N ++ LP  +  C 
Sbjct: 174 -----LTQLQRLDLGHNE-------LDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCR 221

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-I 301
           SLQ L +S NK+   PD I   L  L+ L + +N L+ +P+     +  L IL +  N I
Sbjct: 222 SLQQLDVSENKLMVLPDDI-GDLEQLNDLTVSHNCLQVLPT-SVGHLKKLAILKVDRNAI 279

Query: 302 ASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTS 361
             L   P   S   L ELYL    L E PT +  L+ LR L+L +N L+ IP       S
Sbjct: 280 TQL--TPAVGSCTALSELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCIS 337

Query: 362 LTELDLSDNNISALPPELGLLE 383
           L+ L L DN +  LP E+G LE
Sbjct: 338 LSVLSLRDNLLEQLPLEIGRLE 359



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 165/358 (46%), Gaps = 40/358 (11%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           IA+   L EL    N ++ +PE I   ++L  LDL  N I  +P +I+   S+    + +
Sbjct: 79  IANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMTHLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L+ +P ++G L  L +L++  N L+       QL +L  LDL +N L  LP EIG ++
Sbjct: 139 ISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEIGLLS 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            L++L +  N L  L  S+V   +   L    ++L             D I    +L+  
Sbjct: 199 NLQELYVDQNDLEALPESIVQCRSLQQLDVSENKL---------MVLPDDIGDLEQLN-- 247

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
             +L++    L  +P+ +    ++  L + RN+I +L P + SC +L  L L+ N + + 
Sbjct: 248 --DLTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTEV 305

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317
           P + L +L +L  L LD N L+++PS                                L 
Sbjct: 306 PTS-LGNLKALRTLNLDKNQLKEIPST-------------------------IGGCISLS 339

Query: 318 ELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISAL 375
            L LR   L + P +I RL+ LR+LD+  N L  +P     L +L  L LS++   A+
Sbjct: 340 VLSLRDNLLEQLPLEIGRLENLRVLDVCNNRLNFLPFTINVLFNLQALWLSESQSQAM 397



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 4/154 (2%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LDV  NKL VL ++ I     L +L  S N L  +P ++G L +L  L + +N I  
Sbjct: 223 LQQLDVSENKLMVLPDD-IGDLEQLNDLTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQ 281

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSV 118
           +  ++  C +L+E Y+  N L+ +P  LG L  L TL+L  NQLKE    +  C + LSV
Sbjct: 282 LTPAVGSCTALSELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGC-ISLSV 340

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
           L L +N L  LP EIG++  LR L +  N L  L
Sbjct: 341 LSLRDNLLEQLPLEIGRLENLRVLDVCNNRLNFL 374



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 131/280 (46%), Gaps = 16/280 (5%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+  N +T L    I   T +T L  +   L  MP  IG L  L  L++ +N + +IP 
Sbjct: 111 LDLSSNPITRLPPT-ITLLTSMTHLGLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPP 169

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           SIS    L    +G+N L  LP+E+G LS L  L +  N L+       Q R L  LD+S
Sbjct: 170 SISQLTQLQRLDLGHNELDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVS 229

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
            N L  LP +IG +  L  L ++ N L+ L +S+ +    A+LK          D  A T
Sbjct: 230 ENKLMVLPDDIGDLEQLNDLTVSHNCLQVLPTSVGHLKKLAILKV---------DRNAIT 280

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                +   T LS    EL L    L+ +P+ +     +  L+L +N ++E+P  +  C 
Sbjct: 281 QLTPAVGSCTALS----ELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCI 336

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVP 282
           SL  L L  N ++  P  I   L +L  L + NN L  +P
Sbjct: 337 SLSVLSLRDNLLEQLPLEI-GRLENLRVLDVCNNRLNFLP 375


>gi|426256334|ref|XP_004021795.1| PREDICTED: LOW QUALITY PROTEIN: malignant fibrous
           histiocytoma-amplified sequence 1 [Ovis aries]
          Length = 1029

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 169/348 (48%), Gaps = 25/348 (7%)

Query: 76  MGNNALSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPE 132
           +GNN L  +P  LG  L  L  L L  N+  +      +L   L+ LD+S+N LS L PE
Sbjct: 68  LGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPPAVAELGHHLTELDVSHNRLSVLGPE 127

Query: 133 -IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 191
            +G +  LRKL L+ N L TL + L        L    +RL    DS A  ++       
Sbjct: 128 AVGALRELRKLNLSHNQLPTLPAQLGALVHLEELDVSFNRLAHLPDSLAGLSR------- 180

Query: 192 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSR 251
                  + L ++   L+A P ++ +   + +LD+S N ++ LP ++S+  +L+ L LS 
Sbjct: 181 ------LRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSG 234

Query: 252 NKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFS 311
            ++   P      L+SL  L LDNN LR +P+  F  +  L++L+LS N+    E  P +
Sbjct: 235 AELGTLPSG-FCELASLESLMLDNNGLRALPAQ-FSRLQRLKMLNLSSNLL---EEFPAA 289

Query: 312 SLP--HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSD 369
            LP   L+ELYL R QL   P+ I  L +L  L L  N ++ +P+    LT L EL L  
Sbjct: 290 LLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQG 349

Query: 370 NNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKD 417
           N I+ LP   G L   +   ++  NPL      +  +G   +  Y K+
Sbjct: 350 NQIAVLPDNFGQLS-RVGLWKIKDNPLIQPPYEVCMKGIPYIAAYQKE 396



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 141/309 (45%), Gaps = 63/309 (20%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +++LDV  N+L+VL                        PE +G+L  L +L+L  N++ +
Sbjct: 111 LTELDVSHNRLSVLG-----------------------PEAVGALRELRKLNLSHNQLPT 147

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC-VEACQLRLSVL 119
           +P+ +     L E  +  N L+ LP  L  LS+L TLD+  NQL  +         L  L
Sbjct: 148 LPAQLGALVHLEELDVSFNRLAHLPDSLAGLSRLRTLDVDHNQLTAFPRQLLQLAALEEL 207

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D+S+N L GLP +I  +  L+ L L+G  L TL S                         
Sbjct: 208 DVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFC---------------------- 245

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                 +L ++ +        L L+   L A+P++      +  L+LS N ++E P  L 
Sbjct: 246 ------ELASLES--------LMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFPAALL 291

Query: 240 SCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSY 299
             A L+ L LSRN++   P ++++ L  L  L LDNN +R +P D   ++  L+ L L  
Sbjct: 292 PLAGLEELYLSRNQLTSVP-SLISGLGRLLTLWLDNNRIRYLP-DSIVELTGLEELVLQG 349

Query: 300 N-IASLPEN 307
           N IA LP+N
Sbjct: 350 NQIAVLPDN 358



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 5/183 (2%)

Query: 219 GEITKLDLSRNSIQELPPELSSC-ASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNP 277
           G+I  L+L  N ++E+P  L S   SL+ L+L RN+    P A+      L+ L + +N 
Sbjct: 61  GDIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPPAVAELGHHLTELDVSHNR 120

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
           L  +  +    +  L+ L+LS+N + +LP      +L HL+EL +   +L   P  +  L
Sbjct: 121 LSVLGPEAVGALRELRKLNLSHNQLPTLPAQ--LGALVHLEELDVSFNRLAHLPDSLAGL 178

Query: 337 QQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            +LR LD+  N L + P     L +L ELD+S N +  LP ++  L  +L+ L L G  L
Sbjct: 179 SRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALR-ALKILWLSGAEL 237

Query: 397 RSI 399
            ++
Sbjct: 238 GTL 240



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 10/145 (6%)

Query: 10  KLTVLSNNLIASW-------TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           K+  LS+NL+  +         L EL  S+N L  +P  I  L RL+ L L  NRI  +P
Sbjct: 274 KMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLP 333

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 122
            SI     L E  +  N ++ LP   G+LS++G   +  N L +   E C   +  +   
Sbjct: 334 DSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 393

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGN 147
              L+   P +       KLLL G 
Sbjct: 394 QKELAHSQPAVQPRL---KLLLMGQ 415



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 67/138 (48%)

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298
           ++   ++ L L  N +++ PD + ++L SL  L L  N   Q+P    +    L  LD+S
Sbjct: 58  ANIGDIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPPAVAELGHHLTELDVS 117

Query: 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKN 358
           +N  S+       +L  L++L L   QL   P  +  L  L  LD+S N L  +P+    
Sbjct: 118 HNRLSVLGPEAVGALRELRKLNLSHNQLPTLPAQLGALVHLEELDVSFNRLAHLPDSLAG 177

Query: 359 LTSLTELDLSDNNISALP 376
           L+ L  LD+  N ++A P
Sbjct: 178 LSRLRTLDVDHNQLTAFP 195


>gi|421111699|ref|ZP_15572172.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410802895|gb|EKS09040.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 360

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 155/347 (44%), Gaps = 56/347 (16%)

Query: 51  LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 110
           L L    I ++P  I+   +L +  +  N L+ LP E+G+L  L +L L+ N L     E
Sbjct: 50  LSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLSLYGNLLSTLPEE 109

Query: 111 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 169
              L+ L  L LS+N L  LP  IG++  L  L L+ N                    LR
Sbjct: 110 IGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVN--------------------LR 149

Query: 170 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229
           S +  +E+   S    DL  +        KEL+L G  L+ +P EI +   + KLDLS N
Sbjct: 150 SLIFRSEEIGISEEIGDLQNL--------KELNLTGNRLTTLPKEIGKLQSLEKLDLSEN 201

Query: 230 SIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDI 289
           S+  LP E+    +L+ L L  N++  +P  I   L SL  L L NN L  +P +     
Sbjct: 202 SLAILPKEIGRLQNLKRLSLKGNRLTTFPKEI-GKLQSLEKLDLSNNSLSTLPKE----- 255

Query: 290 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
                                  L +L+EL L   +L   P +I RL+ L+ L L  N L
Sbjct: 256 --------------------IGRLKNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGNRL 295

Query: 350 QSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPL 396
            ++P+      +L EL L  N ++ LP  +  L+ SL +L L  NPL
Sbjct: 296 TTLPKEIGKFQNLIELRLEGNRLTTLPKGIAKLQ-SLWSLNLSKNPL 341



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 109/230 (47%), Gaps = 45/230 (19%)

Query: 37  GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 96
           G+ E IG L  L  L+L  NR+ ++P  I    SL +  +  N+L+ LP E+G+L  L  
Sbjct: 159 GISEEIGDLQNLKELNLTGNRLTTLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKR 218

Query: 97  LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 155
           L L  N+L  +  E  +L+ L  LDLSNNSLS LP EIG++  LR+L L GN L TL   
Sbjct: 219 LSLKGNRLTTFPKEIGKLQSLEKLDLSNNSLSTLPKEIGRLKNLRELSLEGNRLSTLPKE 278

Query: 156 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 215
           +        LK L                              KELSL G  L+ +P EI
Sbjct: 279 I------GRLKNL------------------------------KELSLGGNRLTTLPKEI 302

Query: 216 WEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN--------KIKDW 257
            +   + +L L  N +  LP  ++   SL +L LS+N        +I+ W
Sbjct: 303 GKFQNLIELRLEGNRLTTLPKGIAKLQSLWSLNLSKNPLSVYEKKRIQKW 352



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 148/333 (44%), Gaps = 57/333 (17%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           IA+   L +L    N L  +P+ IG L  L  L L+ N + ++P  I    +L E  + +
Sbjct: 64  IANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLSLYGNLLSTLPEEIGHLKNLKELSLSH 123

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 138
           N L  LP  +G+L  L  LDL  N L+     + ++             G+  EIG +  
Sbjct: 124 NLLITLPENIGRLQNLEVLDLSVN-LRSLIFRSEEI-------------GISEEIGDLQN 169

Query: 139 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSV 196
           L++L LTGN L TL         P  +  L+S  +L  +E+S A   KE       RL  
Sbjct: 170 LKELNLTGNRLTTL---------PKEIGKLQSLEKLDLSENSLAILPKE-----IGRLQ- 214

Query: 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKD 256
             K LSL+G  L+  P EI +   + KLDLS NS+  LP E+    +L+ L L  N++  
Sbjct: 215 NLKRLSLKGNRLTTFPKEIGKLQSLEKLDLSNNSLSTLPKEIGRLKNLRELSLEGNRLST 274

Query: 257 WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHL 316
            P  I   L +L  L L  N L  +P    K+I   Q                     +L
Sbjct: 275 LPKEI-GRLKNLKELSLGGNRLTTLP----KEIGKFQ---------------------NL 308

Query: 317 QELYLRRMQLREAPTDILRLQQLRILDLSQNSL 349
            EL L   +L   P  I +LQ L  L+LS+N L
Sbjct: 309 IELRLEGNRLTTLPKGIAKLQSLWSLNLSKNPL 341



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/153 (39%), Positives = 82/153 (53%), Gaps = 2/153 (1%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +L++ GN+LT L    I     L +L  S+N L  +P+ IG L  L RL L  NR+ +
Sbjct: 170 LKELNLTGNRLTTLPKE-IGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGNRLTT 228

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
            P  I    SL +  + NN+LS LP E+G+L  L  L L  N+L     E  +L+ L  L
Sbjct: 229 FPKEIGKLQSLEKLDLSNNSLSTLPKEIGRLKNLRELSLEGNRLSTLPKEIGRLKNLKEL 288

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152
            L  N L+ LP EIGK   L +L L GN L TL
Sbjct: 289 SLGGNRLTTLPKEIGKFQNLIELRLEGNRLTTL 321



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 133/296 (44%), Gaps = 48/296 (16%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           + +L LS   +  LP +I  +  LRKL L  N L TL   +        L  L+S     
Sbjct: 47  VHILSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKEI------GQLHNLQS----- 95

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                                    LSL G  LS +P EI     + +L LS N +  LP
Sbjct: 96  -------------------------LSLYGNLLSTLPEEIGHLKNLKELSLSHNLLITLP 130

Query: 236 PELSSCASLQTLILSRN----KIKDWPDAI---LTSLSSLSCLKLDNNPLRQVPSDGFKD 288
             +    +L+ L LS N      +     I   +  L +L  L L  N L  +P +    
Sbjct: 131 ENIGRLQNLEVLDLSVNLRSLIFRSEEIGISEEIGDLQNLKELNLTGNRLTTLPKE-IGK 189

Query: 289 IPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347
           +  L+ LDLS N +A LP+      L +L+ L L+  +L   P +I +LQ L  LDLS N
Sbjct: 190 LQSLEKLDLSENSLAILPKE--IGRLQNLKRLSLKGNRLTTFPKEIGKLQSLEKLDLSNN 247

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           SL ++P+    L +L EL L  N +S LP E+G L+ +L+ L L GN L ++ + I
Sbjct: 248 SLSTLPKEIGRLKNLRELSLEGNRLSTLPKEIGRLK-NLKELSLGGNRLTTLPKEI 302



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 1/113 (0%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+  N L+ L    I     L EL    N L+ +P+ IG L  L  L L  NR+ +
Sbjct: 239 LEKLDLSNNSLSTLPKE-IGRLKNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGNRLTT 297

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 113
           +P  I    +L E  +  N L+ LP  + KL  L +L+L  N L  Y  +  Q
Sbjct: 298 LPKEIGKFQNLIELRLEGNRLTTLPKGIAKLQSLWSLNLSKNPLSVYEKKRIQ 350



 Score = 45.1 bits (105), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 12/121 (9%)

Query: 280 QVPSDGFKDIPMLQILDLS-YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQ 338
           Q PSD       + IL LS   I +LP     ++L +L++L LR  QL   P +I +L  
Sbjct: 42  QKPSD-------VHILSLSGQEIKNLPRQ--IANLKNLRKLDLRYNQLTTLPKEIGQLHN 92

Query: 339 LRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398
           L+ L L  N L ++PE   +L +L EL LS N +  LP  +G L+ +L+ L L  N LRS
Sbjct: 93  LQSLSLYGNLLSTLPEEIGHLKNLKELSLSHNLLITLPENIGRLQ-NLEVLDLSVN-LRS 150

Query: 399 I 399
           +
Sbjct: 151 L 151


>gi|402864263|ref|XP_003896392.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Papio anubis]
          Length = 863

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 177/382 (46%), Gaps = 17/382 (4%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           KN L  +P+T+ SL  L  L+L  N++   P ++     L    +  N +S+LP E+ +L
Sbjct: 269 KNKLRHIPDTLPSLKYLRVLNLQYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIREL 328

Query: 92  SKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
             L TL L  N+L    VE  Q L++  L L++N L  +  +I     LR L+L  N L+
Sbjct: 329 KNLETLLLDHNKLTFLAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILMLDKNLLK 388

Query: 151 TLRSSLVNGPTPALLKYLRSRLPE--------NEDSEASTTKEDLITMATRLSVTSKELS 202
            +   +        L    ++L E        N   +    + +++ +   +S  +   S
Sbjct: 389 NIPEKICCCAMLECLTLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSISHLNNICS 448

Query: 203 LE--GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260
           LE  G  ++ +P EI    +I K++L+ N I   P  L +  SL  L ++ N I + P  
Sbjct: 449 LEFSGNIIAGVPIEIKNCQKIIKIELNYNKIMYFPLGLCALDSLYYLSVNGNYISEIPAD 508

Query: 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQEL 319
           I  S   L  L+L  N L  + S+ F  +  L+ LDL  N I  +P     S++  L  L
Sbjct: 509 ISFS-KQLLHLELSENKLL-IFSEHFCSLINLKYLDLGKNQIKKIP--ASISNMISLHVL 564

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            L   +    P ++  L+ LR+LDLS+N LQ I     NL  + +L+ S N     P EL
Sbjct: 565 ILCCNKFETFPRELCTLENLRVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIEL 624

Query: 380 GLLEPSLQALRLDGNPLRSIRR 401
             L+ SL+ L +     R + R
Sbjct: 625 CQLQ-SLEQLNISQIKGRKLTR 645



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 172/376 (45%), Gaps = 20/376 (5%)

Query: 30  ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 89
            S N ++ +P+ I  L  + +L  + N I + PS +    +L    +G N L  +P  L 
Sbjct: 221 VSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDTLP 280

Query: 90  KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 148
            L  L  L+L  NQL  +    C L +L  LDL+ N +S LP EI ++  L  LLL  N 
Sbjct: 281 SLKYLRVLNLQYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLLDHNK 340

Query: 149 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 208
           L  L   +       LLK    +L +N+    S   E+   +  R+ +  K L      L
Sbjct: 341 LTFLAVEIF-----QLLKIKELQLADNKLEVISHKIENFREL--RILMLDKNL------L 387

Query: 209 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSL 268
             IP +I     +  L LS N + ELP  +    +L+ L ++RN +    D+I + L+++
Sbjct: 388 KNIPEKICCCAMLECLTLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSI-SHLNNI 446

Query: 269 SCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLR 327
             L+   N +  VP +  K+   +  ++L+YN I   P      +L  L  L +    + 
Sbjct: 447 CSLEFSGNIIAGVPIE-IKNCQKIIKIELNYNKIMYFP--LGLCALDSLYYLSVNGNYIS 503

Query: 328 EAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQ 387
           E P DI   +QL  L+LS+N L    E F +L +L  LDL  N I  +P  +  +  SL 
Sbjct: 504 EIPADISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNM-ISLH 562

Query: 388 ALRLDGNPLRSIRRTI 403
            L L  N   +  R +
Sbjct: 563 VLILCCNKFETFPREL 578



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 168/359 (46%), Gaps = 26/359 (7%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I    ML  L  S N L  +P+ I  L+ L +L +++N ++ I  SIS   ++       
Sbjct: 394 ICCCAMLECLTLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITDSISHLNNICSLEFSG 453

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
           N ++ +P E+    K+  ++L+ N++  + +  C L  L  L ++ N +S +P +I    
Sbjct: 454 NIIAGVPIEIKNCQKIIKIELNYNKIMYFPLGLCALDSLYYLSVNGNYISEIPADISFSK 513

Query: 138 TLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 194
            L  L L+ N L        SL+N      LKYL   L +N+  +   +  ++I++   +
Sbjct: 514 QLLHLELSENKLLIFSEHFCSLIN------LKYL--DLGKNQIKKIPASISNMISLHVLI 565

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
              +K            P E+     +  LDLS N +Q++  ++ +   +Q L  S N+ 
Sbjct: 566 LCCNK--------FETFPRELCTLENLRVLDLSENQLQKISSDICNLKGIQKLNFSSNQF 617

Query: 255 KDWPDAI--LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFS 311
             +P  +  L SL  L+  ++    L ++P +   ++  L+ LD+S N I  +P N    
Sbjct: 618 IHFPIELCQLQSLEQLNISQIKGRKLTRLPGE-LSNMTQLKELDISNNAIREIPRN--IG 674

Query: 312 SLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDN 370
            L +L  L+    Q+   P  +L L  L+ L+LS N+L ++P    NL SL E++   N
Sbjct: 675 ELRNLVSLHAYNNQISYIPPSLLSLNDLQQLNLSGNNLTTLPSAIYNLFSLKEINFDHN 733



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 124/282 (43%), Gaps = 36/282 (12%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L V GN ++ +  ++  S  +L  L  S+N L    E   SL  L  LDL +N+I  IP+
Sbjct: 495 LSVNGNYISEIPADISFSKQLL-HLELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPA 553

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 122
           SIS   SL    +  N     P EL  L  L  LDL  NQL++   + C L+ +  L+ S
Sbjct: 554 SISNMISLHVLILCCNKFETFPRELCTLENLRVLDLSENQLQKISSDICNLKGIQKLNFS 613

Query: 123 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 182
           +N     P E+ ++ +L +L ++    R L                 +RLP         
Sbjct: 614 SNQFIHFPIELCQLQSLEQLNISQIKGRKL-----------------TRLPGE------- 649

Query: 183 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 242
                ++  T+L    KEL +    +  IP  I E   +  L    N I  +PP L S  
Sbjct: 650 -----LSNMTQL----KELDISNNAIREIPRNIGELRNLVSLHAYNNQISYIPPSLLSLN 700

Query: 243 SLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
            LQ L LS N +   P AI  +L SL  +  D+NPL + P +
Sbjct: 701 DLQQLNLSGNNLTTLPSAIY-NLFSLKEINFDHNPLLRPPME 741



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 141/315 (44%), Gaps = 38/315 (12%)

Query: 111 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 170
            C+   +V +L    L   P +I K+  ++ L L  N ++T + +     +  LL     
Sbjct: 142 TCKDNFTV-NLEAKGLQEFPKDILKIKYVKHLYLDKNQIKTFQGA----DSGDLLGLEIL 196

Query: 171 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 230
            L EN  S   +          RL    + L++   ++S IP EI + G I +L    N 
Sbjct: 197 SLQENGLSSLPS--------EIRLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNY 248

Query: 231 IQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIP 290
           I+  P +L    +L+ L L +NK++  PD  L SL  L  L L  N L   P      +P
Sbjct: 249 IENFPSDLECLGNLEILSLGKNKLRHIPDT-LPSLKYLRVLNLQYNQLTIFPK-ALCFLP 306

Query: 291 MLQILDLSYN-IASLPENP----------------PFSSLPHLQELYLRRMQLREAPTDI 333
            L  LDL+ N I+SLP+                   F ++   Q L ++ +QL +   ++
Sbjct: 307 KLISLDLTGNLISSLPKEIRELKNLETLLLDHNKLTFLAVEIFQLLKIKELQLADNKLEV 366

Query: 334 L-----RLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQA 388
           +       ++LRIL L +N L++IPE       L  L LSDN ++ LP  +  L  +L+ 
Sbjct: 367 ISHKIENFRELRILMLDKNLLKNIPEKICCCAMLECLTLSDNKLTELPKNIHKLN-NLRK 425

Query: 389 LRLDGNPLRSIRRTI 403
           L ++ N +  I  +I
Sbjct: 426 LHVNRNNMVKITDSI 440


>gi|410940571|ref|ZP_11372375.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410784315|gb|EKR73302.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 354

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 147/324 (45%), Gaps = 64/324 (19%)

Query: 81  LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 139
           L+  P E+G+L  L  LDL  N+L     E  QL+ L  L L +N L+ LP EI ++ +L
Sbjct: 53  LTTFPKEIGQLKNLQKLDLGGNELTALSKEIVQLQNLQELSLHSNKLTSLPKEIEQLRSL 112

Query: 140 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 199
           + L L        R+ LV  P   LL                               T +
Sbjct: 113 KNLDL-------FRNQLVTVPKEVLLLQ-----------------------------TLE 136

Query: 200 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           +L+L    LS IP E+ +   +  L LS N I  LP E+     L+  IL  N  K++P 
Sbjct: 137 KLNLSLNRLSTIPKEVGQLKNLQTLKLSDNQIVSLPKEIEGLQELKEFILGNNHFKNFPG 196

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQEL 319
            +L  L +L  L L  N L  +P    K+I  LQ                     +L++L
Sbjct: 197 EVL-QLKNLQKLNLSENQLVSIP----KEIGQLQ---------------------NLRDL 230

Query: 320 YLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPEL 379
            L R Q+   PT++L+LQ L+ L LS+N L S+ +    L +L  L L +N ++ LP E+
Sbjct: 231 VLDRNQITILPTEVLQLQNLQELHLSENQLTSLSKEIDQLKNLQWLSLRNNRLTTLPKEI 290

Query: 380 GLLEPSLQALRLDGNPLRSIRRTI 403
           G L+ +LQ L L  N L ++ + I
Sbjct: 291 GQLK-NLQRLELGNNQLTNLPKEI 313



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 129/278 (46%), Gaps = 42/278 (15%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KLD+ GN+LT LS   I     L EL    N L  +P+ I  L  L  LDL +N++++
Sbjct: 66  LQKLDLGGNELTALSKE-IVQLQNLQELSLHSNKLTSLPKEIEQLRSLKNLDLFRNQLVT 124

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ-------------LKEY 107
           +P  +    +L +  +  N LS +P E+G+L  L TL L  NQ             LKE+
Sbjct: 125 VPKEVLLLQTLEKLNLSLNRLSTIPKEVGQLKNLQTLKLSDNQIVSLPKEIEGLQELKEF 184

Query: 108 CV----------EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
            +          E  QL+ L  L+LS N L  +P EIG++  LR L+L  N +  L    
Sbjct: 185 ILGNNHFKNFPGEVLQLKNLQKLNLSENQLVSIPKEIGQLQNLRDLVLDRNQITIL---- 240

Query: 157 VNGPTPAL-LKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 214
              PT  L L+ L+   L EN+ +  S   + L  +          LSL    L+ +P E
Sbjct: 241 ---PTEVLQLQNLQELHLSENQLTSLSKEIDQLKNLQW--------LSLRNNRLTTLPKE 289

Query: 215 IWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRN 252
           I +   + +L+L  N +  LP E+     LQ L L  N
Sbjct: 290 IGQLKNLQRLELGNNQLTNLPKEIGQLKGLQRLELDSN 327



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 150/345 (43%), Gaps = 63/345 (18%)

Query: 35  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 94
           L   P+ IG L  L +LDL  N + ++   I    +L E  + +N L++LP E+ +L  L
Sbjct: 53  LTTFPKEIGQLKNLQKLDLGGNELTALSKEIVQLQNLQELSLHSNKLTSLPKEIEQLRSL 112

Query: 95  GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 153
             LDL  NQL     E   L+ L  L+LS N LS +P E+G++  L+ L L+ N + +L 
Sbjct: 113 KNLDLFRNQLVTVPKEVLLLQTLEKLNLSLNRLSTIPKEVGQLKNLQTLKLSDNQIVSL- 171

Query: 154 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 213
                   P  ++ L+                             KE  L   +    P 
Sbjct: 172 --------PKEIEGLQEL---------------------------KEFILGNNHFKNFPG 196

Query: 214 EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKL 273
           E+ +   + KL+LS N +  +P E+    +L+ L+L RN+I   P  +L  L +L  L L
Sbjct: 197 EVLQLKNLQKLNLSENQLVSIPKEIGQLQNLRDLVLDRNQITILPTEVL-QLQNLQELHL 255

Query: 274 DNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDI 333
             N                Q+  LS  I           L +LQ L LR  +L   P +I
Sbjct: 256 SEN----------------QLTSLSKEI---------DQLKNLQWLSLRNNRLTTLPKEI 290

Query: 334 LRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
            +L+ L+ L+L  N L ++P+    L  L  L+L  N +S+   E
Sbjct: 291 GQLKNLQRLELGNNQLTNLPKEIGQLKGLQRLELDSNPLSSKEKE 335



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 110/239 (46%), Gaps = 27/239 (11%)

Query: 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTL 247
           +T A + S   + L L   NL+  P EI +   + KLDL  N +  L  E+    +LQ L
Sbjct: 33  LTKALQNSSNVRILDLSFQNLTTFPKEIGQLKNLQKLDLGGNELTALSKEIVQLQNLQEL 92

Query: 248 ILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD---------------GFKDIPM- 291
            L  NK+   P  I   L SL  L L  N L  VP +                   IP  
Sbjct: 93  SLHSNKLTSLPKEI-EQLRSLKNLDLFRNQLVTVPKEVLLLQTLEKLNLSLNRLSTIPKE 151

Query: 292 ------LQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDL 344
                 LQ L LS N I SLP+      L  L+E  L     +  P ++L+L+ L+ L+L
Sbjct: 152 VGQLKNLQTLKLSDNQIVSLPK--EIEGLQELKEFILGNNHFKNFPGEVLQLKNLQKLNL 209

Query: 345 SQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           S+N L SIP+    L +L +L L  N I+ LP E+  L+ +LQ L L  N L S+ + I
Sbjct: 210 SENQLVSIPKEIGQLQNLRDLVLDRNQITILPTEVLQLQ-NLQELHLSENQLTSLSKEI 267


>gi|428166658|gb|EKX35630.1| hypothetical protein GUITHDRAFT_79694 [Guillardia theta CCMP2712]
          Length = 332

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 135/289 (46%), Gaps = 17/289 (5%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           +  L ++ N +T + +  +A + ML  L A  N ++ +   IG    L+ LDL +N++ S
Sbjct: 34  LQSLRIDSNSITNVPS-YVAHFPMLKHLRAHDNTISSLSSNIGQCKHLLSLDLQRNQLSS 92

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSV 118
           IP S++ C  L + ++  N +  +P     L  L +  +  N+LKE    +   +  +  
Sbjct: 93  IPLSLAACTGLTKLWLSENRIEQIPYTFSHLQNLKSFRIDKNRLKEIEPGITKMKALVQY 152

Query: 119 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 178
           + L+ N L   P E+G MT L  L         +R + ++   PA+       L   +  
Sbjct: 153 MVLAENRLQSFPMELGLMTNLTIL--------DVRQNRISAVPPAV-----GSLRNLQIF 199

Query: 179 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 238
           +AS      +    + +V  +EL LE   LS +P  + E   + +L LS N I  LP   
Sbjct: 200 DASQNFIQTLPTQMKQNVVLQELLLESNRLSVVPDVVAELQHLKELRLSNNQILTLPDLS 259

Query: 239 SSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFK 287
           +S   L+ L L  N ++     +   L+ L  LKL+NN L ++PSD FK
Sbjct: 260 NSAGKLEILFLDHNNLRSLAHDLFV-LTRLKILKLNNNSLLEIPSDLFK 307



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 141/323 (43%), Gaps = 41/323 (12%)

Query: 33  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 92
           N L   P+ +  L  L  L +  N I ++PS ++    L      +N +S+L + +G+  
Sbjct: 19  NKLTAFPQELNQLGILQSLRIDSNSITNVPSYVAHFPMLKHLRAHDNTISSLSSNIGQCK 78

Query: 93  KLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 150
            L +LDL  NQL      + AC   L+ L LS N +  +P     +  L+   +  N L+
Sbjct: 79  HLLSLDLQRNQLSSIPLSLAACT-GLTKLWLSENRIEQIPYTFSHLQNLKSFRIDKNRLK 137

Query: 151 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 210
            +   +      AL++Y+   L EN   ++   +  L+T  T L V           +SA
Sbjct: 138 EIEPGITK--MKALVQYM--VLAENR-LQSFPMELGLMTNLTILDVRQNR-------ISA 185

Query: 211 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSC 270
           +P  +     +   D S+N IQ LP ++     LQ L+L  N++   PD ++  L  L  
Sbjct: 186 VPPAVGSLRNLQIFDASQNFIQTLPTQMKQNVVLQELLLESNRLSVVPD-VVAELQHLKE 244

Query: 271 LKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP 330
           L+L NN +  +P             DLS            +S   L+ L+L    LR   
Sbjct: 245 LRLSNNQILTLP-------------DLS------------NSAGKLEILFLDHNNLRSLA 279

Query: 331 TDILRLQQLRILDLSQNSLQSIP 353
            D+  L +L+IL L+ NSL  IP
Sbjct: 280 HDLFVLTRLKILKLNNNSLLEIP 302



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 141/294 (47%), Gaps = 18/294 (6%)

Query: 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180
           L++N L+  P E+ ++  L+ L +  N +  + S + + P   +LK+LR+      D+  
Sbjct: 16  LNDNKLTAFPQELNQLGILQSLRIDSNSITNVPSYVAHFP---MLKHLRA-----HDNTI 67

Query: 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 240
           S+   ++      LS     L L+   LS+IP  +     +TKL LS N I+++P   S 
Sbjct: 68  SSLSSNIGQCKHLLS-----LDLQRNQLSSIPLSLAACTGLTKLWLSENRIEQIPYTFSH 122

Query: 241 CASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN 300
             +L++  + +N++K+    I    + +  + L  N L+  P +    +  L ILD+  N
Sbjct: 123 LQNLKSFRIDKNRLKEIEPGITKMKALVQYMVLAENRLQSFPME-LGLMTNLTILDVRQN 181

Query: 301 -IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNL 359
            I+++P  P   SL +LQ     +  ++  PT + +   L+ L L  N L  +P+    L
Sbjct: 182 RISAVP--PAVGSLRNLQIFDASQNFIQTLPTQMKQNVVLQELLLESNRLSVVPDVVAEL 239

Query: 360 TSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLK 413
             L EL LS+N I  LP +L      L+ L LD N LRS+   +       +LK
Sbjct: 240 QHLKELRLSNNQILTLP-DLSNSAGKLEILFLDHNNLRSLAHDLFVLTRLKILK 292



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 8/168 (4%)

Query: 233 ELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPML 292
           ++PPE  +    Q ++L+ NK+  +P   L  L  L  L++D+N +  VPS      PML
Sbjct: 3   QIPPEYKNA---QNVLLNDNKLTAFPQE-LNQLGILQSLRIDSNSITNVPS-YVAHFPML 57

Query: 293 QILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQS 351
           + L    N I+SL  N       HL  L L+R QL   P  +     L  L LS+N ++ 
Sbjct: 58  KHLRAHDNTISSLSSN--IGQCKHLLSLDLQRNQLSSIPLSLAACTGLTKLWLSENRIEQ 115

Query: 352 IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           IP  F +L +L    +  N +  + P +  ++  +Q + L  N L+S 
Sbjct: 116 IPYTFSHLQNLKSFRIDKNRLKEIEPGITKMKALVQYMVLAENRLQSF 163



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 31/178 (17%)

Query: 10  KLTVLSNNLIASWTM-------LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 62
           +  VL+ N + S+ M       LT L   +N ++ +P  +GSL  L   D  QN I ++P
Sbjct: 151 QYMVLAENRLQSFPMELGLMTNLTILDVRQNRISAVPPAVGSLRNLQIFDASQNFIQTLP 210

Query: 63  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ---LKEYCVEACQL----- 114
           + +     L E  + +N LS +P  + +L  L  L L +NQ   L +    A +L     
Sbjct: 211 TQMKQNVVLQELLLESNRLSVVPDVVAELQHLKELRLSNNQILTLPDLSNSAGKLEILFL 270

Query: 115 ----------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
                           RL +L L+NNSL  +P ++ K+  L   +   N  RT++S L
Sbjct: 271 DHNNLRSLAHDLFVLTRLKILKLNNNSLLEIPSDLFKIRGLGLSIFCINHCRTMKSYL 328


>gi|17552452|ref|NP_497716.1| Protein RSU-1 [Caenorhabditis elegans]
 gi|3874724|emb|CAA87096.1| Protein RSU-1 [Caenorhabditis elegans]
          Length = 268

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 105/189 (55%), Gaps = 9/189 (4%)

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
           S + +A  IT+L LS N +  +PP ++   SLQ+L L  N+I+D P +I +SL  L  L 
Sbjct: 27  SHLIDAEIITRLTLSHNKLTSVPPNIADLVSLQSLNLWNNQIEDLPPSI-SSLPKLRILN 85

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYN---IASLPENPPFSSLPHLQELYLRRMQLREA 329
           +  N L  +P  GF   P L+ILDL+YN     SLP N  F  +  L+ LYL        
Sbjct: 86  VGMNKLSILPR-GFGSFPELEILDLTYNNLSERSLPGN--FFFMQTLRALYLGDNDFEML 142

Query: 330 PTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLE--PSLQ 387
           P D+  L  L+IL L +N L ++P+    LT L EL +  N ++ +PPELG LE   S Q
Sbjct: 143 PGDVENLTNLQILVLRENDLLTLPKELGKLTRLRELHIQGNRLAMIPPELGNLELVGSKQ 202

Query: 388 ALRLDGNPL 396
            LRL+ NP 
Sbjct: 203 VLRLEHNPF 211



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 66/161 (40%), Gaps = 26/161 (16%)

Query: 24  MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 83
           ++T L  S N L  +P  I  L  L  L+L  N+I  +P SIS    L    +G N LS 
Sbjct: 34  IITRLTLSHNKLTSVPPNIADLVSLQSLNLWNNQIEDLPPSISSLPKLRILNVGMNKLSI 93

Query: 84  LPAELGKLSKLGTLDLHSNQLKEYCVEACQL--------------------------RLS 117
           LP   G   +L  LDL  N L E  +                                L 
Sbjct: 94  LPRGFGSFPELEILDLTYNNLSERSLPGNFFFMQTLRALYLGDNDFEMLPGDVENLTNLQ 153

Query: 118 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 158
           +L L  N L  LP E+GK+T LR+L + GN L  +   L N
Sbjct: 154 ILVLRENDLLTLPKELGKLTRLRELHIQGNRLAMIPPELGN 194



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 3/121 (2%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI--LSIPSSISGCCSLAEFYM 76
           I+S   L  L    N L+ +P   GS   L  LDL  N +   S+P +     +L   Y+
Sbjct: 75  ISSLPKLRILNVGMNKLSILPRGFGSFPELEILDLTYNNLSERSLPGNFFFMQTLRALYL 134

Query: 77  GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGK 135
           G+N    LP ++  L+ L  L L  N L     E  +L RL  L +  N L+ +PPE+G 
Sbjct: 135 GDNDFEMLPGDVENLTNLQILVLRENDLLTLPKELGKLTRLRELHIQGNRLAMIPPELGN 194

Query: 136 M 136
           +
Sbjct: 195 L 195


>gi|344278808|ref|XP_003411184.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 7-like [Loxodonta africana]
          Length = 1540

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 182/390 (46%), Gaps = 62/390 (15%)

Query: 35  LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 93
           L  +P+ + +  R L  L L  N+I  +P  +  C +L +  + +N LS+LP  +  L  
Sbjct: 34  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVN 93

Query: 94  LGTLDLHSNQLKEY--CVEACQ----------------------LRLSVLDLSNNSLSGL 129
           L  LD+  N ++E+   ++ C+                      L L+ L L++  L  L
Sbjct: 94  LKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFL 153

Query: 130 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 189
           P   G++  LR L L  N L+TL  S+       L +  R  L  NE SE     + +  
Sbjct: 154 PANFGRLVKLRILELRENHLKTLPKSMHK-----LAQLERLDLGNNEFSELPEVLDQIQN 208

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
           +        +EL ++   L  +P  I +   +  LD+S+N I+ +  E+S C +L+ L+L
Sbjct: 209 L--------RELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLL 260

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 308
           S N ++  PD+I   L  L+ LK+D+N L  +P +   ++ +L+  D S N + SLP   
Sbjct: 261 SSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLP-NTIGNLSLLEEFDCSCNELESLPSTV 318

Query: 309 PF-----------SSLPHLQE----------LYLRRMQLREAPTDILRLQQLRILDLSQN 347
            +           + LP L            + LR  +L   P +I ++Q+LR+L+LS N
Sbjct: 319 GYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN 378

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L+++P  F  L  L  L LSDN   AL P
Sbjct: 379 RLKNLPFSFTKLKELAALWLSDNQSKALIP 408



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 114/217 (52%), Gaps = 10/217 (4%)

Query: 201 LSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           L     +L  +P E++     + +L L  N I+ELP +L +C +L+ L +  N +   P 
Sbjct: 27  LDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPT 86

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 318
            I  SL +L  L +  N +++ P +  K    L I++ S N I+ LP+   F+ L +L +
Sbjct: 87  TI-ASLVNLKELDISKNGVQEFP-ENIKCCKCLTIIEASVNPISKLPDG--FTQLLNLTQ 142

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           LYL    L   P +  RL +LRIL+L +N L+++P+    L  L  LDL +N  S LP  
Sbjct: 143 LYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEV 202

Query: 379 LGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYL 415
           L  ++ +L+ L +D N L+ +  +I   G   +L YL
Sbjct: 203 LDQIQ-NLRELWMDNNALQVLPGSI---GKLKMLVYL 235



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 120/247 (48%), Gaps = 17/247 (6%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           +N L  +P+++  L++L RLDL  N    +P  +    +L E +M NNAL  LP  +GKL
Sbjct: 170 ENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKL 229

Query: 92  SKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
             L  LD+  N+++   +E   C+  L  L LS+N L  LP  IG +  L  L +  N L
Sbjct: 230 KMLVYLDMSKNRIETVDMEISGCEA-LEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQL 288

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
             L +++ N      L  L       E+ + S  + + +        + + L+++   L 
Sbjct: 289 TMLPNTIGN------LSLL-------EEFDCSCNELESLPSTVGYLHSLRTLAVDENFLP 335

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P EI     +T + L  N ++ LP E+     L+ L LS N++K+ P +  T L  L+
Sbjct: 336 ELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFS-FTKLKELA 394

Query: 270 CLKLDNN 276
            L L +N
Sbjct: 395 ALWLSDN 401



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 144/319 (45%), Gaps = 62/319 (19%)

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N       +
Sbjct: 16  CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN------CQ 69

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
            LR                              +LS+   +LS++P+ I     + +LD+
Sbjct: 70  ALR------------------------------KLSIPDNDLSSLPTTIASLVNLKELDI 99

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S+N +QE P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGVQEFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 287 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLP-------HLQELYLRRM 324
             +  L+IL+L  N + +LP+              N  FS LP       +L+EL++   
Sbjct: 158 GRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNN 217

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
            L+  P  I +L+ L  LD+S+N ++++        +L +L LS N +  LP  +GLL+ 
Sbjct: 218 ALQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLK- 276

Query: 385 SLQALRLDGNPLRSIRRTI 403
            L  L++D N L  +  TI
Sbjct: 277 KLTTLKVDDNQLTMLPNTI 295



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 111/256 (43%), Gaps = 38/256 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI +
Sbjct: 186 LERLDLGNNEFSELPE-VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIET 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           +   ISGC +L +  + +N L  LP  +G L KL TL +  NQL         L  L   
Sbjct: 245 VDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEF 304

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D S N L  LP  +G + +LR L +  N L            P L + + S         
Sbjct: 305 DCSCNELESLPSTVGYLHSLRTLAVDENFL------------PELPREIGS--------- 343

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                         ++V    +SL    L  +P EI +  ++  L+LS N ++ LP   +
Sbjct: 344 -----------CKNVTV----MSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFT 388

Query: 240 SCASLQTLILSRNKIK 255
               L  L LS N+ K
Sbjct: 389 KLKELAALWLSDNQSK 404


>gi|327282312|ref|XP_003225887.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Anolis
           carolinensis]
          Length = 1454

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 182/390 (46%), Gaps = 62/390 (15%)

Query: 35  LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 93
           L  +P+ + +  R L  L L  N+I  +P  +  C +L +  + +N LS+LP  +  L  
Sbjct: 34  LQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVN 93

Query: 94  LGTLDLHSNQLKEY--CVEACQ----------------------LRLSVLDLSNNSLSGL 129
           L  LD+  N ++++   ++ C+                      L L+ L L++  L  L
Sbjct: 94  LKELDISKNGIQDFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFL 153

Query: 130 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 189
           P   G++  LR L L  N L+TL  S+       L +  R  L  NE SE     E +  
Sbjct: 154 PANFGRLVKLRILELRENHLKTLPKSMH-----KLTQLERLDLGNNEFSELPEVLEQIQN 208

Query: 190 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLIL 249
           +        KEL ++   L  +P  I    ++  LD+S+N I+ +  ++S C +L+ L+L
Sbjct: 209 L--------KELWMDNNALQTLPGPIGRLKQLVYLDVSKNRIESIDMDISGCEALEDLLL 260

Query: 250 SRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENP 308
           S N ++  PD+I   L  L+ LK+D+N L  +P +   ++ +L+  D S N + SLP   
Sbjct: 261 SSNMLQQLPDSIGL-LKRLTTLKVDDNQLTVLP-NAIGNLSLLEEFDCSCNELESLPPTI 318

Query: 309 PF-----------SSLPHLQE----------LYLRRMQLREAPTDILRLQQLRILDLSQN 347
            +           + LP L            + LR  +L   P +I ++Q+LR+L+LS N
Sbjct: 319 GYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDN 378

Query: 348 SLQSIPEGFKNLTSLTELDLSDNNISALPP 377
            L+++P  F  L  L  L LSDN   AL P
Sbjct: 379 RLKNLPITFTKLKELAALWLSDNQSKALIP 408



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 159/338 (47%), Gaps = 27/338 (7%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + KL +  N L+ L  + IAS   L EL  SKN +   PE I     L  ++   N I  
Sbjct: 71  LRKLSIPDNDLSSLPTS-IASLVNLKELDISKNGIQDFPENIKCCKCLTIIEASVNPISK 129

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 119
           +P   +   +L + Y+ +  L  LPA  G+L KL  L+L  N LK       +L +L  L
Sbjct: 130 LPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERL 189

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           DL NN  S LP  + ++  L++L +  N L+TL   +        L   ++R+ E+ D +
Sbjct: 190 DLGNNEFSELPEVLEQIQNLKELWMDNNALQTLPGPIGRLKQLVYLDVSKNRI-ESIDMD 248

Query: 180 ASTTK--EDL-------------ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 224
            S  +  EDL             I +  RL+     L ++   L+ +P+ I     + + 
Sbjct: 249 ISGCEALEDLLLSSNMLQQLPDSIGLLKRLTT----LKVDDNQLTVLPNAIGNLSLLEEF 304

Query: 225 DLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSD 284
           D S N ++ LPP +    SL+TL +  N + + P  I  S  +++ + L +N L  +P D
Sbjct: 305 DCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREI-GSCKNVTVMSLRSNKLEFLP-D 362

Query: 285 GFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYL 321
               +  L++L+LS N + +LP    F+ L  L  L+L
Sbjct: 363 EIGQMQKLRVLNLSDNRLKNLPIT--FTKLKELAALWL 398



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 7/201 (3%)

Query: 201 LSLEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPD 259
           L     +L  +P E++     + +L L  N I+ELP +L +C +L+ L +  N +   P 
Sbjct: 27  LDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPT 86

Query: 260 AILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQE 318
           +I  SL +L  L +  N ++  P +  K    L I++ S N I+ LP+   F+ L +L +
Sbjct: 87  SI-ASLVNLKELDISKNGIQDFP-ENIKCCKCLTIIEASVNPISKLPDG--FTQLLNLTQ 142

Query: 319 LYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPE 378
           LYL    L   P +  RL +LRIL+L +N L+++P+    LT L  LDL +N  S LP  
Sbjct: 143 LYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEV 202

Query: 379 LGLLEPSLQALRLDGNPLRSI 399
           L  ++ +L+ L +D N L+++
Sbjct: 203 LEQIQ-NLKELWMDNNALQTL 222



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 142/312 (45%), Gaps = 62/312 (19%)

Query: 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLK 166
           C    +  +SVLD S+ SL  +P E+     TL +L L  N +  L   L N       +
Sbjct: 16  CFRGEEEIVSVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFN------CQ 69

Query: 167 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 226
            LR                              +LS+   +LS++P+ I     + +LD+
Sbjct: 70  ALR------------------------------KLSIPDNDLSSLPTSIASLVNLKELDI 99

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           S+N IQ+ P  +  C  L  +  S N I   PD   T L +L+ L L++  L  +P++ F
Sbjct: 100 SKNGIQDFPENIKCCKCLTIIEASVNPISKLPDG-FTQLLNLTQLYLNDAFLEFLPAN-F 157

Query: 287 KDIPMLQILDLSYN-IASLPE--------------NPPFSSLP-------HLQELYLRRM 324
             +  L+IL+L  N + +LP+              N  FS LP       +L+EL++   
Sbjct: 158 GRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNN 217

Query: 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEP 384
            L+  P  I RL+QL  LD+S+N ++SI        +L +L LS N +  LP  +GLL+ 
Sbjct: 218 ALQTLPGPIGRLKQLVYLDVSKNRIESIDMDISGCEALEDLLLSSNMLQQLPDSIGLLK- 276

Query: 385 SLQALRLDGNPL 396
            L  L++D N L
Sbjct: 277 RLTTLKVDDNQL 288



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 120/247 (48%), Gaps = 17/247 (6%)

Query: 32  KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 91
           +N L  +P+++  L++L RLDL  N    +P  +    +L E +M NNAL  LP  +G+L
Sbjct: 170 ENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNALQTLPGPIGRL 229

Query: 92  SKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149
            +L  LD+  N+++  +  +  C+  L  L LS+N L  LP  IG +  L  L +  N L
Sbjct: 230 KQLVYLDVSKNRIESIDMDISGCEA-LEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQL 288

Query: 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 209
             L +++ N      L  L       E+ + S  + + +        + + L+++   L 
Sbjct: 289 TVLPNAIGN------LSLL-------EEFDCSCNELESLPPTIGYLHSLRTLAVDENFLP 335

Query: 210 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLS 269
            +P EI     +T + L  N ++ LP E+     L+ L LS N++K+ P    T L  L+
Sbjct: 336 ELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLP-ITFTKLKELA 394

Query: 270 CLKLDNN 276
            L L +N
Sbjct: 395 ALWLSDN 401



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 112/256 (43%), Gaps = 38/256 (14%)

Query: 1   MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 60
           + +LD+  N+ + L   ++     L EL    N L  +P  IG L +L+ LD+ +NRI S
Sbjct: 186 LERLDLGNNEFSELPE-VLEQIQNLKELWMDNNALQTLPGPIGRLKQLVYLDVSKNRIES 244

Query: 61  IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 119
           I   ISGC +L +  + +N L  LP  +G L +L TL +  NQL         L  L   
Sbjct: 245 IDMDISGCEALEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTVLPNAIGNLSLLEEF 304

Query: 120 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 179
           D S N L  LPP IG + +LR L +  N L            P L + + S         
Sbjct: 305 DCSCNELESLPPTIGYLHSLRTLAVDENFL------------PELPREIGS--------- 343

Query: 180 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 239
                         ++V    +SL    L  +P EI +  ++  L+LS N ++ LP   +
Sbjct: 344 -----------CKNVTV----MSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPITFT 388

Query: 240 SCASLQTLILSRNKIK 255
               L  L LS N+ K
Sbjct: 389 KLKELAALWLSDNQSK 404


>gi|46445672|ref|YP_007037.1| hypothetical protein pc0038 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46399313|emb|CAF22762.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 953

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 119/371 (32%), Positives = 180/371 (48%), Gaps = 46/371 (12%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P + G+L  L  L+L  N++ ++P S     +L   Y+ NN L  LP   G L++L  L
Sbjct: 285 LPSSFGNLINLFFLNLINNQLQTLPDSFGNLTNLQFLYLYNNKLELLPTSFGNLNQLNKL 344

Query: 98  DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           +L +NQL+        L  L+ L L+NN L  LP   GK+T L+KL +  N L++L    
Sbjct: 345 NLANNQLQILPQFFGNLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQLQSL---- 400

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
                P L                     +LI + T        L L   NL  +P    
Sbjct: 401 -----PELFT-------------------NLINLQT--------LDLNNNNLRTLPDSFG 428

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
               +  L+LS N +Q LP    +   L+ L ++ N+++  P + LT+L +L  L L+NN
Sbjct: 429 NLNRLHVLNLSNNQLQVLPHSFGNLTQLRDLHIAYNQLQSLPGS-LTNLVNLQTLDLNNN 487

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            L+ +P + F ++  +  L+L+ N   SLPE   F +L  LQ LYL   Q++  P     
Sbjct: 488 NLQTLP-NSFGNLNQINYLNLANNQFHSLPE--SFGNLTKLQCLYLYNNQIQILPETFSN 544

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L  L  L L+ N LQ++PE F NLT+L  L+L+ NN   +P  L  L    + + L+ NP
Sbjct: 545 LINLTELHLNYNQLQTLPETFTNLTNLRNLNLTGNNFETIPECLFHLSSECE-IYLEANP 603

Query: 396 LRSIRRTILDR 406
           L    R ILD+
Sbjct: 604 L---SREILDQ 611



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 187/428 (43%), Gaps = 72/428 (16%)

Query: 29  IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 88
           +A KNL + +P + G+L++L  LDL  N++ ++P+S     +L    + NN  S +P  L
Sbjct: 134 LAEKNL-HILPSSFGNLNQLNHLDLTNNQLQTLPNSFENLTNLRSLNLCNNQFSEIPDCL 192

Query: 89  GKLSKLGTLDLHSNQLKE----------------------------YCVE---------- 110
            +L     ++L  N L +                            +C E          
Sbjct: 193 FRLPSACDINLKENPLSQEILDQLNQRVNQTNYQGPKFQVSSPTPSFCSELMDQIIPRSE 252

Query: 111 ----------ACQL----RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
                      C+       S++ L+  ++  LP   G +  L  L L  N L+TL  S 
Sbjct: 253 PILLDDALAQFCRFFEIHDTSMISLTEKNIQLLPSSFGNLINLFFLNLINNQLQTLPDSF 312

Query: 157 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216
            N      L    ++L             +L+  +        +L+L    L  +P    
Sbjct: 313 GNLTNLQFLYLYNNKL-------------ELLPTSFGNLNQLNKLNLANNQLQILPQFFG 359

Query: 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNN 276
               +TKL L+ N ++ LP        L+ L ++ N+++  P+ + T+L +L  L L+NN
Sbjct: 360 NLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQLQSLPE-LFTNLINLQTLDLNNN 418

Query: 277 PLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILR 335
            LR +P D F ++  L +L+LS N +  LP    F +L  L++L++   QL+  P  +  
Sbjct: 419 NLRTLP-DSFGNLNRLHVLNLSNNQLQVLPH--SFGNLTQLRDLHIAYNQLQSLPGSLTN 475

Query: 336 LQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNP 395
           L  L+ LDL+ N+LQ++P  F NL  +  L+L++N   +LP   G L   LQ L L  N 
Sbjct: 476 LVNLQTLDLNNNNLQTLPNSFGNLNQINYLNLANNQFHSLPESFGNL-TKLQCLYLYNNQ 534

Query: 396 LRSIRRTI 403
           ++ +  T 
Sbjct: 535 IQILPETF 542



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 110/265 (41%), Gaps = 59/265 (22%)

Query: 18  LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 77
              + T LT+L  + N L  +P + G L++L +L +  N++ S+P   +   +L    + 
Sbjct: 357 FFGNLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQLQSLPELFTNLINLQTLDLN 416

Query: 78  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMT 137
           NN L  LP   G L+                      RL VL+LSNN L  LP   G +T
Sbjct: 417 NNNLRTLPDSFGNLN----------------------RLHVLNLSNNQLQVLPHSFGNLT 454

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 197
            LR L +  N L++L  SL N                            L+ + T     
Sbjct: 455 QLRDLHIAYNQLQSLPGSLTN----------------------------LVNLQT----- 481

Query: 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDW 257
              L L   NL  +P+      +I  L+L+ N    LP    +   LQ L L  N+I+  
Sbjct: 482 ---LDLNNNNLQTLPNSFGNLNQINYLNLANNQFHSLPESFGNLTKLQCLYLYNNQIQIL 538

Query: 258 PDAILTSLSSLSCLKLDNNPLRQVP 282
           P+   ++L +L+ L L+ N L+ +P
Sbjct: 539 PET-FSNLINLTELHLNYNQLQTLP 562



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 154/351 (43%), Gaps = 59/351 (16%)

Query: 92  SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 151
           + L TLD   ++L ++C         ++ L+  +L  LP   G +  L  L LT N L+T
Sbjct: 108 AYLTTLD---SELAQFCKIFEIYNTRIISLAEKNLHILPSSFGNLNQLNHLDLTNNQLQT 164

Query: 152 LRSSLVNGPTPALLKYLRS----------------RLPENED---SEASTTKEDLITMAT 192
           L +S  N      L  LRS                RLP   D    E   ++E L  +  
Sbjct: 165 LPNSFEN------LTNLRSLNLCNNQFSEIPDCLFRLPSACDINLKENPLSQEILDQLNQ 218

Query: 193 RLSVTSKE------------LSLEGMNLSAIP--------------SEIWEAGEITKLDL 226
           R++ T+ +               E M+   IP                 +E  + + + L
Sbjct: 219 RVNQTNYQGPKFQVSSPTPSFCSELMD-QIIPRSEPILLDDALAQFCRFFEIHDTSMISL 277

Query: 227 SRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGF 286
           +  +IQ LP    +  +L  L L  N+++  PD+   +L++L  L L NN L  +P+   
Sbjct: 278 TEKNIQLLPSSFGNLINLFFLNLINNQLQTLPDS-FGNLTNLQFLYLYNNKLELLPTSFG 336

Query: 287 KDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQ 346
               + ++   +  +  LP+   F +L +L +LYL   +L   PT   +L QL+ L ++ 
Sbjct: 337 NLNQLNKLNLANNQLQILPQ--FFGNLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAY 394

Query: 347 NSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397
           N LQS+PE F NL +L  LDL++NN+  LP   G L   L  L L  N L+
Sbjct: 395 NQLQSLPELFTNLINLQTLDLNNNNLRTLPDSFGNLN-RLHVLNLSNNQLQ 444


>gi|225438416|ref|XP_002276062.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Vitis vinifera]
 gi|296082577|emb|CBI21582.3| unnamed protein product [Vitis vinifera]
          Length = 557

 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 136/258 (52%), Gaps = 15/258 (5%)

Query: 38  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 97
           +P++IG LS L+ LDL +NRI+++P++I G  SL +  + +N ++ LP  +G L  +  L
Sbjct: 244 LPDSIGKLSSLMTLDLSENRIVALPATIGGLSSLTKLDLHSNRIAELPDCIGNLLSVVVL 303

Query: 98  DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 156
           DL  NQL       C+L RL  LDLS+N LS LP  IG +  L+KL +  N +  +  ++
Sbjct: 304 DLRGNQLTSLPATFCRLVRLEELDLSSNRLSSLPESIGSLVKLKKLSVETNDIEEIPHTI 363

Query: 157 VNGPTPALLKYLRSRLPENEDSEA--------STTKEDLITMATRLSVTS--KELSLEGM 206
               +   L+   +RL    ++          S    ++  + T +S  S  +EL +   
Sbjct: 364 GQCSSLKELRADYNRLKALPEAVGRIQSLEILSVRYNNIKQLPTTMSSLSNLRELDVSFN 423

Query: 207 NLSAIPSEIWEAGEITKLDLSRN--SIQELPPELSSCASLQTLILSRNKIKDWPDAILTS 264
            L +IP  +  A  + K+++  N   +Q LP  + +   L+ L +S N+I+  PD+    
Sbjct: 424 ELESIPESLCFATTLVKMNIGSNFADLQYLPRSIGNLEMLEELDISNNQIRVLPDS-FKM 482

Query: 265 LSSLSCLKLDNNPLRQVP 282
           L+ L  L+LD NPL +VP
Sbjct: 483 LTRLRVLRLDQNPL-EVP 499



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 135/327 (41%), Gaps = 88/327 (26%)

Query: 116 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 175
           L  LDLS N +  LP  IG +++L KL L  N +                    + LP+ 
Sbjct: 254 LMTLDLSENRIVALPATIGGLSSLTKLDLHSNRI--------------------AELPD- 292

Query: 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 235
                         +   LSV    L L G  L+++P+       + +LDLS N +  LP
Sbjct: 293 -------------CIGNLLSVVV--LDLRGNQLTSLPATFCRLVRLEELDLSSNRLSSLP 337

Query: 236 PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQIL 295
             + S   L+ L +  N I++ P  I    SSL  L+ D N L+ +P +    I  L+IL
Sbjct: 338 ESIGSLVKLKKLSVETNDIEEIPHTI-GQCSSLKELRADYNRLKALP-EAVGRIQSLEIL 395

Query: 296 DLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPE- 354
            + YN                         +++ PT +  L  LR LD+S N L+SIPE 
Sbjct: 396 SVRYN------------------------NIKQLPTTMSSLSNLRELDVSFNELESIPES 431

Query: 355 ------------------------GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALR 390
                                      NL  L ELD+S+N I  LP    +L   L+ LR
Sbjct: 432 LCFATTLVKMNIGSNFADLQYLPRSIGNLEMLEELDISNNQIRVLPDSFKML-TRLRVLR 490

Query: 391 LDGNPLRSIRRTILDRGTKAVLKYLKD 417
           LD NPL    R + + G +AV++Y+ +
Sbjct: 491 LDQNPLEVPPRHVAEMGAQAVVQYMAE 517



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 50/214 (23%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           LD+ GN+LT L          L EL  S N L+ +PE+IGSL +L +L +  N I  IP 
Sbjct: 303 LDLRGNQLTSLPATF-CRLVRLEELDLSSNRLSSLPESIGSLVKLKKLSVETNDIEEIPH 361

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY---------------- 107
           +I  C SL E     N L ALP  +G++  L  L +  N +K+                 
Sbjct: 362 TIGQCSSLKELRADYNRLKALPEAVGRIQSLEILSVRYNNIKQLPTTMSSLSNLRELDVS 421

Query: 108 -----------CVEACQLRLSV----------------------LDLSNNSLSGLPPEIG 134
                      C     +++++                      LD+SNN +  LP    
Sbjct: 422 FNELESIPESLCFATTLVKMNIGSNFADLQYLPRSIGNLEMLEELDISNNQIRVLPDSFK 481

Query: 135 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 168
            +T LR L L  NPL      +      A+++Y+
Sbjct: 482 MLTRLRVLRLDQNPLEVPPRHVAEMGAQAVVQYM 515



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 27/171 (15%)

Query: 229 NSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKD 288
           + I+ LP  +   +SL TL LS N+I   P A +  LSSL+ L L +N + ++P D   +
Sbjct: 239 DQIEWLPDSIGKLSSLMTLDLSENRIVALP-ATIGGLSSLTKLDLHSNRIAELP-DCIGN 296

Query: 289 IPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNS 348
           +  + +LDL  N                        QL   P    RL +L  LDLS N 
Sbjct: 297 LLSVVVLDLRGN------------------------QLTSLPATFCRLVRLEELDLSSNR 332

Query: 349 LQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSI 399
           L S+PE   +L  L +L +  N+I  +P  +G    SL+ LR D N L+++
Sbjct: 333 LSSLPESIGSLVKLKKLSVETNDIEEIPHTIGQCS-SLKELRADYNRLKAL 382



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 284 DGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRIL 342
           D    +  L  LDLS N I +LP       L  L +L L   ++ E P  I  L  + +L
Sbjct: 246 DSIGKLSSLMTLDLSENRIVALPAT--IGGLSSLTKLDLHSNRIAELPDCIGNLLSVVVL 303

Query: 343 DLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRT 402
           DL  N L S+P  F  L  L ELDLS N +S+LP  +G L   L+ L ++ N +  I  T
Sbjct: 304 DLRGNQLTSLPATFCRLVRLEELDLSSNRLSSLPESIGSL-VKLKKLSVETNDIEEIPHT 362

Query: 403 ILDRGTKAVLKYLK 416
           I   G  + LK L+
Sbjct: 363 I---GQCSSLKELR 373


>gi|242007056|ref|XP_002424358.1| leucine-rich repeat-containing protein 1, lrrc1/lap4, putative
           [Pediculus humanus corporis]
 gi|212507758|gb|EEB11620.1| leucine-rich repeat-containing protein 1, lrrc1/lap4, putative
           [Pediculus humanus corporis]
          Length = 1463

 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 180/391 (46%), Gaps = 47/391 (12%)

Query: 25  LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84
           L EL+   N +  +P+    L RL RL L  N I ++P  I    +L E  +  N +  +
Sbjct: 39  LEELLLDANHIRDLPKNFFRLQRLRRLGLSDNEIQNLPPDIGNFENLVELDVSRNDIQDI 98

Query: 85  PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 143
           P  +  L  L   D  SN ++        L+ L+ L L++ SL+ LPP++G +T+L+ L 
Sbjct: 99  PENIKSLQALQVADFSSNPIQRLPPGFVHLKNLTTLGLNDMSLTSLPPDLGNLTSLQSLE 158

Query: 144 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 203
           L  N L++L  +L                               +T   RL +   E+ +
Sbjct: 159 LRENLLKSLPDTLSQ-----------------------------LTKLERLDLGDNEIEI 189

Query: 204 EGMNLSAIPS--EIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAI 261
              ++  +P+  E+W         L  N +Q +PPE+     L  L +S N+++D P+ I
Sbjct: 190 LPHHIGKLPALLELW---------LDHNQLQHIPPEIGQLKKLTCLDISENRLEDLPEEI 240

Query: 262 LTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELY 320
              L++L+ L L  N +  +P DG  D+  L IL +  N +A L  NP      +LQEL 
Sbjct: 241 -RGLTNLTDLHLSQNVIENLP-DGIGDLEKLTILKVDQNRLAVL--NPNIGKCLNLQELI 296

Query: 321 LRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELG 380
           L    L E P  I  L  L  L++ +NSLQ +P    NL+ L  L L DN ++ LP E+G
Sbjct: 297 LTENFLLELPITIGNLVNLNNLNVDRNSLQRLPVEIGNLSHLGVLSLRDNKLTHLPNEVG 356

Query: 381 LLEPSLQALRLDGNPLRSIRRTILDRGTKAV 411
                L  L + GN L+ +  ++     KAV
Sbjct: 357 NCS-ELHVLHVSGNRLQYLPFSLAKLNLKAV 386



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 154/339 (45%), Gaps = 46/339 (13%)

Query: 19  IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 78
           I ++  L EL  S+N +  +PE I SL  L   D   N I  +P       +L    + +
Sbjct: 79  IGNFENLVELDVSRNDIQDIPENIKSLQALQVADFSSNPIQRLPPGFVHLKNLTTLGLND 138

Query: 79  NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 137
            +L++LP +LG L+ L +L+L  N LK       QL +L  LDL +N +  LP  IGK+ 
Sbjct: 139 MSLTSLPPDLGNLTSLQSLELRENLLKSLPDTLSQLTKLERLDLGDNEIEILPHHIGKLP 198

Query: 138 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL---ITMATRL 194
            L +L L  N L+ +   +        L    +RL            EDL   I   T L
Sbjct: 199 ALLELWLDHNQLQHIPPEIGQLKKLTCLDISENRL------------EDLPEEIRGLTNL 246

Query: 195 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKI 254
           +    +L L    +  +P  I +  ++T L + +N +  L P +  C +LQ LIL+ N +
Sbjct: 247 T----DLHLSQNVIENLPDGIGDLEKLTILKVDQNRLAVLNPNIGKCLNLQELILTENFL 302

Query: 255 KDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLP 314
            + P  I  +L +L+ L +D N L+++P         ++I +LS                
Sbjct: 303 LELPITI-GNLVNLNNLNVDRNSLQRLP---------VEIGNLS---------------- 336

Query: 315 HLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIP 353
           HL  L LR  +L   P ++    +L +L +S N LQ +P
Sbjct: 337 HLGVLSLRDNKLTHLPNEVGNCSELHVLHVSGNRLQYLP 375



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 1/121 (0%)

Query: 4   LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 63
           L V+ N+L VL+ N I     L ELI ++N L  +P TIG+L  L  L++ +N +  +P 
Sbjct: 272 LKVDQNRLAVLNPN-IGKCLNLQELILTENFLLELPITIGNLVNLNNLNVDRNSLQRLPV 330

Query: 64  SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 123
            I     L    + +N L+ LP E+G  S+L  L +  N+L+       +L L  + LS 
Sbjct: 331 EIGNLSHLGVLSLRDNKLTHLPNEVGNCSELHVLHVSGNRLQYLPFSLAKLNLKAVWLSE 390

Query: 124 N 124
           N
Sbjct: 391 N 391



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 76/150 (50%), Gaps = 27/150 (18%)

Query: 278 LRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDILRL 336
           L+ VP D  +    L+ L L  N I  LP+N  F  L  L+ L L   +++  P DI   
Sbjct: 25  LQSVPEDVMRYSRSLEELLLDANHIRDLPKN--FFRLQRLRRLGLSDNEIQNLPPDIGNF 82

Query: 337 QQLRILDLSQNSLQSIPE-----------------------GFKNLTSLTELDLSDNNIS 373
           + L  LD+S+N +Q IPE                       GF +L +LT L L+D +++
Sbjct: 83  ENLVELDVSRNDIQDIPENIKSLQALQVADFSSNPIQRLPPGFVHLKNLTTLGLNDMSLT 142

Query: 374 ALPPELGLLEPSLQALRLDGNPLRSIRRTI 403
           +LPP+LG L  SLQ+L L  N L+S+  T+
Sbjct: 143 SLPPDLGNL-TSLQSLELRENLLKSLPDTL 171


>gi|451847893|gb|EMD61200.1| hypothetical protein COCSADRAFT_149829 [Cochliobolus sativus ND90Pr]
          Length = 1089

 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 194/454 (42%), Gaps = 94/454 (20%)

Query: 4    LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN------- 56
            L+V  N+L  +   + +S   L EL ASKN L G   +  S++ L  L + QN       
Sbjct: 671  LNVTDNQLRSIPTEVFSS--ALIELHASKNRLEGAFFSRNSVTHLQELHVAQNSLTSLCE 728

Query: 57   -----------------RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 99
                             R+ S+P+ +SG  +L    +G N L+ALP     L +L T D 
Sbjct: 729  DDSIDLPALKVLNVSINRLTSLPT-VSGWSNLITLLVGENKLTALPEGFTALQQLRTADF 787

Query: 100  HSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 159
                                  + N ++ L  +I  M +L  L +  NPLR  R  L  G
Sbjct: 788  ----------------------TGNDITQLDEKIALMESLDHLTVAANPLRD-RKFLSMG 824

Query: 160  PTPALLKYLRSRLPE------------NEDSEASTTKEDLITMATRLSVTSKELSLEGMN 207
             T  L + L SRLP             NED++   +K +L    T L +  K++  + + 
Sbjct: 825  -TEDLKRDLASRLPADDLPAEVDEEFVNEDTQEPQSKWELTPSGT-LDLAGKDM--DELE 880

Query: 208  LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267
            +    SE+   G + +L L RN    +PP + +   L  L LSRN I     A L  L+ 
Sbjct: 881  VDDATSEVLVNG-LRQLQLQRNKFTAIPPVVGTFQHLTVLDLSRNPIGVALSAPL-ELAQ 938

Query: 268  LSCLKLDNNPLRQ-VPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQL 326
            L  L+L +N L    P       P L  LD+S N  S        +LP L   +      
Sbjct: 939  LRDLRLASNKLTSLTPLTAHLTAPHLVTLDVSINRLS-------GALPTLHTSF------ 985

Query: 327  REAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSL 386
                        L  L  S N +  +P   ++LT+L  ++L +N+I  L P +GLL+ +L
Sbjct: 986  ----------PSLTTLLASDNKISEVPA--ESLTNLRIVNLGNNDIDRLEPRIGLLQGTL 1033

Query: 387  QALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIP 420
                ++GN  R   R +L +GT AVL +L+DKIP
Sbjct: 1034 TGFEVEGNKFRVPNRQVLQKGTDAVLTWLRDKIP 1067



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 107/273 (39%), Gaps = 74/273 (27%)

Query: 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278
           G +  +D   N + ELP  L     L  L LSRNK+      ++  + +L  LKL  N L
Sbjct: 572 GGVQNIDFHGNILGELPMGLRRLTQLSKLNLSRNKLSMEVFDVIAQIPTLRELKLAENNL 631

Query: 279 RQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPTDIL--- 334
               S    D+  L+IL+L  N + SLP    F  L  L+ L +   QLR  PT++    
Sbjct: 632 EGPLSPALCDLTALEILELQANKLDSLPSG--FERLTQLRTLNVTDNQLRSIPTEVFSSA 689

Query: 335 ---------RLQ----------QLRILDLSQNSLQS------------------------ 351
                    RL+           L+ L ++QNSL S                        
Sbjct: 690 LIELHASKNRLEGAFFSRNSVTHLQELHVAQNSLTSLCEDDSIDLPALKVLNVSINRLTS 749

Query: 352 ----------------------IPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQAL 389
                                 +PEGF  L  L   D + N+I+ L  ++ L+E SL  L
Sbjct: 750 LPTVSGWSNLITLLVGENKLTALPEGFTALQQLRTADFTGNDITQLDEKIALME-SLDHL 808

Query: 390 RLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEN 422
            +  NPLR   R  L  GT+ + + L  ++P +
Sbjct: 809 TVAANPLRD--RKFLSMGTEDLKRDLASRLPAD 839


>gi|440790044|gb|ELR11333.1| RasGEF domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 1789

 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 178/365 (48%), Gaps = 24/365 (6%)

Query: 51  LDLHQNRILSIPSS-ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 109
           LDL  +++  +P     G   + E  + NN LS LP EL  L  +    L  N+L +   
Sbjct: 48  LDLSCSKLAWLPRERFVGFVGVTELVLNNNRLSRLPHELFALPNVRVARLEFNELVDLPA 107

Query: 110 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN--------GP 160
           E  Q R L VL + NN L  LP ++G++  LR L L  N L TL +SL+           
Sbjct: 108 ELGQWRALEVLVVHNNRLKRLPTQVGRLRRLRHLNLHCNQLTTLPTSLLELDIRTITLHA 167

Query: 161 TPALLKYLR----SRLPENED----SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 212
            PAL + L+    +     ED    S     ++ +   A   +  ++EL LEG  L A+P
Sbjct: 168 NPALSENLKRICQAVFALREDTLDLSHCGPIRDQVEEQALGYARLTRELRLEGNALHALP 227

Query: 213 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLK 272
           + + +   +  L    N I  +P  L    +L  L L+ N++ + P A +  LSSL  + 
Sbjct: 228 TAVGQFFRLQSLLADDNQISAIPVHLCKLPALARLSLADNRLANLP-AEIGLLSSLRSVN 286

Query: 273 LDNNPLRQVPSDGFKDIPMLQILDLSYN-IASLPENPPFSSLPHLQELYLRRMQLREAPT 331
           +DNN L  +P   F  +  L+ L L+ N I S+  +     L  LQ + +   ++R  P 
Sbjct: 287 MDNNFLSVLPP-AFFHLVNLEGLSLANNKIESVSGD--IGKLKKLQSMNMANNKIRTLPQ 343

Query: 332 DILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRL 391
           ++  L QL+ L L  NS+  +P+GF NL  L E++L DN +++ P +L  L P+++ L  
Sbjct: 344 ELFTLTQLQSLHLEHNSISVLPDGFSNLRLLREVNLHDNLLTSTPVQLYQL-PNIRRLSF 402

Query: 392 DGNPL 396
           + NP+
Sbjct: 403 ENNPI 407


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.314    0.132    0.367 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,303,998,846
Number of Sequences: 23463169
Number of extensions: 253893709
Number of successful extensions: 1101519
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 15742
Number of HSP's successfully gapped in prelim test: 23292
Number of HSP's that attempted gapping in prelim test: 574760
Number of HSP's gapped (non-prelim): 215991
length of query: 422
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 277
effective length of database: 8,957,035,862
effective search space: 2481098933774
effective search space used: 2481098933774
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 78 (34.7 bits)