Query 014560
Match_columns 422
No_of_seqs 198 out of 2819
Neff 11.0
Searched_HMMs 13730
Date Mon Mar 25 13:47:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014560.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014560hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2omza2 c.10.2.1 (A:33-416) In 100.0 3.6E-28 2.6E-32 222.2 30.9 354 6-394 29-383 (384)
2 d2omza2 c.10.2.1 (A:33-416) In 100.0 5.5E-27 4E-31 214.2 30.4 342 28-401 27-368 (384)
3 d1xkua_ c.10.2.7 (A:) Decorin 99.9 2.3E-24 1.7E-28 190.1 27.6 116 290-405 171-295 (305)
4 d1xkua_ c.10.2.7 (A:) Decorin 99.9 3.8E-24 2.8E-28 188.6 26.4 274 24-382 11-296 (305)
5 d1jl5a_ c.10.2.6 (A:) Leucine 99.9 6.3E-21 4.6E-25 171.4 33.3 97 24-129 39-135 (353)
6 d1p9ag_ c.10.2.7 (G:) von Will 99.9 3.1E-22 2.3E-26 172.2 21.9 196 196-397 10-208 (266)
7 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 4.1E-21 3E-25 167.0 22.3 203 196-398 32-239 (284)
8 d1jl5a_ c.10.2.6 (A:) Leucine 99.9 4.8E-20 3.5E-24 165.6 30.0 135 1-149 40-174 (353)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.9 4.2E-21 3.1E-25 165.0 21.9 132 219-350 77-208 (266)
10 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 1.4E-22 1E-26 179.2 11.5 248 46-375 50-307 (313)
11 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 4.7E-22 3.4E-26 175.7 13.9 241 24-325 51-302 (313)
12 d1ozna_ c.10.2.7 (A:) Reticulo 99.8 6.7E-20 4.8E-24 159.2 22.1 206 199-406 14-223 (284)
13 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 4.7E-22 3.4E-26 185.5 4.9 367 1-397 4-439 (460)
14 d1h6ua2 c.10.2.1 (A:36-262) In 99.8 5.1E-19 3.7E-23 148.2 17.8 204 26-298 22-225 (227)
15 d1h6ua2 c.10.2.1 (A:36-262) In 99.8 2E-18 1.5E-22 144.5 18.0 201 5-274 25-225 (227)
16 d1h6ta2 c.10.2.1 (A:31-240) In 99.8 1.7E-17 1.2E-21 136.7 16.8 184 24-274 25-208 (210)
17 d2omxa2 c.10.2.1 (A:37-235) In 99.8 1.4E-17 1E-21 136.1 16.1 181 24-271 19-199 (199)
18 d2omxa2 c.10.2.1 (A:37-235) In 99.7 3.8E-17 2.8E-21 133.4 16.8 162 217-389 38-199 (199)
19 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 3.6E-17 2.6E-21 134.7 16.1 165 218-393 45-209 (210)
20 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 3.7E-17 2.7E-21 138.2 15.0 207 198-406 10-223 (242)
21 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.7 4E-20 2.9E-24 172.2 -6.9 353 24-401 3-414 (460)
22 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 2.1E-16 1.6E-20 133.5 14.9 198 196-393 29-234 (242)
23 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 4.2E-17 3.1E-21 132.3 9.5 125 224-350 13-139 (192)
24 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.6 2.2E-16 1.6E-20 128.0 9.9 172 197-373 9-183 (192)
25 d1dcea3 c.10.2.2 (A:444-567) R 99.6 6.4E-16 4.7E-20 114.9 10.7 104 2-108 1-106 (124)
26 d1a9na_ c.10.2.4 (A:) Spliceso 99.6 4.5E-15 3.3E-19 116.0 8.6 125 238-390 14-145 (162)
27 d1a9na_ c.10.2.4 (A:) Spliceso 99.6 1.8E-15 1.3E-19 118.3 6.2 124 19-143 14-145 (162)
28 d2astb2 c.10.1.3 (B:2136-2419) 99.5 3.7E-14 2.7E-18 122.1 14.0 218 2-276 3-235 (284)
29 d1dcea3 c.10.2.2 (A:444-567) R 99.5 4.9E-14 3.6E-18 104.6 12.0 105 26-152 1-105 (124)
30 d2astb2 c.10.1.3 (B:2136-2419) 99.5 1E-13 7.4E-18 119.3 10.0 216 26-300 3-235 (284)
31 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.4 3.1E-14 2.3E-18 126.6 5.7 234 18-304 26-316 (344)
32 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.4 3E-14 2.2E-18 126.6 4.7 240 36-329 21-317 (344)
33 d1m9la_ c.10.3.1 (A:) Outer ar 99.4 6.9E-15 5E-19 119.1 -3.3 127 25-152 25-155 (198)
34 d1m9la_ c.10.3.1 (A:) Outer ar 99.3 7.9E-14 5.7E-18 112.8 -0.7 138 3-143 27-180 (198)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 99.3 5E-11 3.7E-15 91.9 13.5 106 290-397 8-116 (156)
36 d2ifga3 c.10.2.7 (A:36-191) Hi 99.2 9.9E-11 7.2E-15 90.2 10.9 82 224-305 13-95 (156)
37 d1koha1 c.10.2.3 (A:201-362) m 98.2 7.5E-08 5.5E-12 74.2 0.3 82 24-105 43-128 (162)
38 d1pgva_ c.10.1.1 (A:) Tropomod 98.2 5.1E-07 3.7E-11 69.8 4.7 85 21-105 13-113 (167)
39 d1koha1 c.10.2.3 (A:201-362) m 98.1 9.3E-07 6.8E-11 67.9 4.6 83 16-98 58-152 (162)
40 d1pgva_ c.10.1.1 (A:) Tropomod 98.0 3.5E-06 2.5E-10 64.9 5.1 109 287-396 12-143 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 97.9 2.9E-06 2.1E-10 65.4 3.2 85 16-100 10-110 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 97.8 3E-06 2.2E-10 65.3 2.0 108 42-149 13-144 (166)
No 1
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.97 E-value=3.6e-28 Score=222.16 Aligned_cols=354 Identities=21% Similarity=0.267 Sum_probs=252.2
Q ss_pred ccCCcceecChhHHhhcccccceecccccccCCchhhhccccCCeEeccCCccccCCCCCccCCCCCEEEcCCCcCccCc
Q 014560 6 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 85 (422)
Q Consensus 6 ls~~~i~~i~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~i~~l~ 85 (422)
+..+.+++... .+.+.+|++|+++++.|+.+ +.+..+++|++|++++|.++.+|+ +.++++|++|++++|.+..++
T Consensus 29 l~~~~~~~~~~--~~~l~~l~~L~l~~~~I~~l-~gl~~L~nL~~L~Ls~N~l~~l~~-l~~L~~L~~L~L~~n~i~~i~ 104 (384)
T d2omza2 29 LGKTNVTDTVS--QTDLDQVTTLQADRLGIKSI-DGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADIT 104 (384)
T ss_dssp TTCSSTTSEEC--HHHHTTCCEEECCSSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCG
T ss_pred hCCCCCCCccC--HHHhCCCCEEECCCCCCCCc-cccccCCCCCEEeCcCCcCCCCcc-ccCCccccccccccccccccc
Confidence 44455554222 45677899999999999887 467889999999999999998864 899999999999999999886
Q ss_pred hhhhCCCCCcEEEccCCcccccccccccceecEEEcCCCCCCCCCcc-ccccCCccEEEcCCCccccccccccCCCChHH
Q 014560 86 AELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE-IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164 (422)
Q Consensus 86 ~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~ 164 (422)
. +..+++|+.|+++++.++.+........+.......+.+...... ...................+.....
T Consensus 105 ~-l~~l~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 176 (384)
T d2omza2 105 P-LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTT------- 176 (384)
T ss_dssp G-GTTCTTCCEEECCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTT-------
T ss_pred c-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccc-------
Confidence 4 889999999999999888766655544455555544443332111 1111111111111111111000000
Q ss_pred HHHHHccCCCCccccccchhhhHHHhhhccccccceeeccCCCCCCCCcccccCCCccEEeCCCCccccCCccccCCCCC
Q 014560 165 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 244 (422)
Q Consensus 165 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L 244 (422)
.......... ............++.+.+.++.+..+++ ....++++++++++|.++.++ .+..+++|
T Consensus 177 ---------~~~~~~~~~~--~~~~~~~~~l~~~~~l~l~~n~i~~~~~-~~~~~~L~~L~l~~n~l~~~~-~l~~l~~L 243 (384)
T d2omza2 177 ---------LERLDISSNK--VSDISVLAKLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKDIG-TLASLTNL 243 (384)
T ss_dssp ---------CCEEECCSSC--CCCCGGGGGCTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCG-GGGGCTTC
T ss_pred ---------cccccccccc--cccccccccccccceeeccCCccCCCCc-ccccCCCCEEECCCCCCCCcc-hhhccccc
Confidence 0000000000 0000111223467788888887776654 355678999999999988765 57888999
Q ss_pred cEEEecCCcCCCCChHHHhcCCCCCEEECCCCCCCcCCCCCCCCCCCccEEEccCCcCCCCCCCCCCCCccCceEEeCCC
Q 014560 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRM 324 (422)
Q Consensus 245 ~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~ 324 (422)
+.+++++|.+.+.++ +..+++|+.++++.+.+..+++ +..++.++.+.+.++.+.+.. .+..+++++.+++++|
T Consensus 244 ~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~~--~~~~~~l~~l~~~~n~l~~~~--~~~~~~~l~~L~ls~n 317 (384)
T d2omza2 244 TDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDIS--PISNLKNLTYLTLYFN 317 (384)
T ss_dssp SEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCG--GGGGCTTCSEEECCSS
T ss_pred chhccccCccCCCCc--ccccccCCEeeccCcccCCCCc--ccccccccccccccccccccc--ccchhcccCeEECCCC
Confidence 999999998887764 6788999999999988887754 778889999999998887643 3778889999999999
Q ss_pred cCccCCcccccCCCCcEEECCCCCCcccCccCcCCCCCCEEeCCCCCCcccCCccccCCccccEEEccCC
Q 014560 325 QLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGN 394 (422)
Q Consensus 325 ~i~~l~~~~~~~~~L~~l~l~~n~l~~l~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n 394 (422)
.++.++. +..+++|+.|++++|.++.++ .+.++++|++|++++|+++.++. +..+ ++|+.|++++|
T Consensus 318 ~l~~l~~-l~~l~~L~~L~L~~n~l~~l~-~l~~l~~L~~L~l~~N~l~~l~~-l~~l-~~L~~L~L~~N 383 (384)
T d2omza2 318 NISDISP-VSSLTKLQRLFFANNKVSDVS-SLANLTNINWLSAGHNQISDLTP-LANL-TRITQLGLNDQ 383 (384)
T ss_dssp CCSCCGG-GGGCTTCCEEECCSSCCCCCG-GGGGCTTCCEEECCSSCCCBCGG-GTTC-TTCSEEECCCE
T ss_pred CCCCCcc-cccCCCCCEEECCCCCCCCCh-hHcCCCCCCEEECCCCcCCCChh-hccC-CCCCEeeCCCC
Confidence 9998753 778999999999999999876 58889999999999999998764 5555 89999999987
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.96 E-value=5.5e-27 Score=214.22 Aligned_cols=342 Identities=23% Similarity=0.293 Sum_probs=252.3
Q ss_pred eecccccccCCchhhhccccCCeEeccCCccccCCCCCccCCCCCEEEcCCCcCccCchhhhCCCCCcEEEccCCccccc
Q 014560 28 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 107 (422)
Q Consensus 28 L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~i~~l~~~l~~~~~L~~L~l~~~~~~~l 107 (422)
..++.+.++... ....+.+|++|+++++.++.+ +.++.+++|++|++++|.++.++. +.++++|++|++++|.+.++
T Consensus 27 ~~l~~~~~~~~~-~~~~l~~l~~L~l~~~~I~~l-~gl~~L~nL~~L~Ls~N~l~~l~~-l~~L~~L~~L~L~~n~i~~i 103 (384)
T d2omza2 27 TVLGKTNVTDTV-SQTDLDQVTTLQADRLGIKSI-DGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADI 103 (384)
T ss_dssp HHTTCSSTTSEE-CHHHHTTCCEEECCSSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC
T ss_pred HHhCCCCCCCcc-CHHHhCCCCEEECCCCCCCCc-cccccCCCCCEEeCcCCcCCCCcc-ccCCcccccccccccccccc
Confidence 355555554432 234667899999999999988 568899999999999999999975 99999999999999999988
Q ss_pred ccccccceecEEEcCCCCCCCCCccccccCCccEEEcCCCccccccccccCCCChHHHHHHHccCCCCccccccchhhhH
Q 014560 108 CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 187 (422)
Q Consensus 108 ~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 187 (422)
++.....+|+.++++++.++.++. ......+.......+.+............ ...........
T Consensus 104 ~~l~~l~~L~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~------------~~~~~~~~~~~--- 167 (384)
T d2omza2 104 TPLANLTNLTGLTLFNNQITDIDP-LKNLTNLNRLELSSNTISDISALSGLTSL------------QQLSFGNQVTD--- 167 (384)
T ss_dssp GGGTTCTTCCEEECCSSCCCCCGG-GTTCTTCSEEEEEEEEECCCGGGTTCTTC------------SEEEEEESCCC---
T ss_pred cccccccccccccccccccccccc-ccccccccccccccccccccccccccccc------------cccccccccch---
Confidence 765444559999999998887644 34445666666655544332221111000 00000000000
Q ss_pred HHhhhccccccceeeccCCCCCCCCcccccCCCccEEeCCCCccccCCccccCCCCCcEEEecCCcCCCCChHHHhcCCC
Q 014560 188 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSS 267 (422)
Q Consensus 188 ~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 267 (422)
.... ............. ...........+++++.+.++++.++.+++ +..+++|+++++++|.+.+.+ .+..+++
T Consensus 168 ~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~l~l~~n~i~~~~~-~~~~~~L~~L~l~~n~l~~~~--~l~~l~~ 242 (384)
T d2omza2 168 LKPL-ANLTTLERLDISS-NKVSDISVLAKLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKDIG--TLASLTN 242 (384)
T ss_dssp CGGG-TTCTTCCEEECCS-SCCCCCGGGGGCTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCG--GGGGCTT
T ss_pred hhhh-ccccccccccccc-cccccccccccccccceeeccCCccCCCCc-ccccCCCCEEECCCCCCCCcc--hhhcccc
Confidence 0000 0001111111222 222334455667899999999999888754 567789999999999988875 3678999
Q ss_pred CCEEECCCCCCCcCCCCCCCCCCCccEEEccCCcCCCCCCCCCCCCccCceEEeCCCcCccCCcccccCCCCcEEECCCC
Q 014560 268 LSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQN 347 (422)
Q Consensus 268 L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~l~l~~n 347 (422)
|+.+++++|.+..+++ +..+++|+.++++++.+.+..+ +..++.++.+.+.++.+..++ .+..+++++.+++++|
T Consensus 243 L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~~--~~~~~~l~~l~~~~n~l~~~~-~~~~~~~l~~L~ls~n 317 (384)
T d2omza2 243 LTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDIS-PISNLKNLTYLTLYFN 317 (384)
T ss_dssp CSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCG-GGGGCTTCSEEECCSS
T ss_pred cchhccccCccCCCCc--ccccccCCEeeccCcccCCCCc--ccccccccccccccccccccc-ccchhcccCeEECCCC
Confidence 9999999999888765 7889999999999998876543 778889999999999988764 4778899999999999
Q ss_pred CCcccCccCcCCCCCCEEeCCCCCCcccCCccccCCccccEEEccCCCCCccch
Q 014560 348 SLQSIPEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRR 401 (422)
Q Consensus 348 ~l~~l~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~~~~i~~ 401 (422)
+++.++. +..+++|++|++++|.|+.++ .+..+ ++|++|++++|+++++++
T Consensus 318 ~l~~l~~-l~~l~~L~~L~L~~n~l~~l~-~l~~l-~~L~~L~l~~N~l~~l~~ 368 (384)
T d2omza2 318 NISDISP-VSSLTKLQRLFFANNKVSDVS-SLANL-TNINWLSAGHNQISDLTP 368 (384)
T ss_dssp CCSCCGG-GGGCTTCCEEECCSSCCCCCG-GGGGC-TTCCEEECCSSCCCBCGG
T ss_pred CCCCCcc-cccCCCCCEEECCCCCCCCCh-hHcCC-CCCCEEECCCCcCCCChh
Confidence 9998864 888999999999999999876 46665 999999999999998865
No 3
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.93 E-value=2.3e-24 Score=190.06 Aligned_cols=116 Identities=24% Similarity=0.307 Sum_probs=60.2
Q ss_pred CCccEEEccCCcCCCCCCCCCCCCccCceEEeCCCcCccCC-cccccCCCCcEEECCCCCCcccCccCcCCCCCCEEeCC
Q 014560 290 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAP-TDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLS 368 (422)
Q Consensus 290 ~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~-~~~~~~~~L~~l~l~~n~l~~l~~~~~~~~~L~~L~l~ 368 (422)
++++.+++.+|.........+..++.++.|++++|.+..++ ..+.++++|++|++++|+++.+|.++..+++|+.|+++
T Consensus 171 ~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~lp~~l~~l~~L~~L~Ls 250 (305)
T d1xkua_ 171 PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLH 250 (305)
T ss_dssp TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECC
T ss_pred CccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeecccccccccccccccccCCCEEECC
Confidence 34444444444444433344444455555555555555432 23445556666666666666565556556666666666
Q ss_pred CCCCcccCCcccc------CCccccEEEccCCCCC--ccchHHHh
Q 014560 369 DNNISALPPELGL------LEPSLQALRLDGNPLR--SIRRTILD 405 (422)
Q Consensus 369 ~n~l~~~~~~~~~------~~~~L~~l~l~~n~~~--~i~~~~~~ 405 (422)
+|+|+.++...+. ..++|+.|++.+|++. .+++..|.
T Consensus 251 ~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~~~~~~~~f~ 295 (305)
T d1xkua_ 251 NNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFR 295 (305)
T ss_dssp SSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGT
T ss_pred CCccCccChhhccCcchhcccCCCCEEECCCCcCccCcCCHhHhc
Confidence 6666555433221 1255666666666654 34444443
No 4
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.93 E-value=3.8e-24 Score=188.59 Aligned_cols=274 Identities=24% Similarity=0.313 Sum_probs=151.8
Q ss_pred cccceecccccccCCchhhhccccCCeEeccCCccccCCC-CCccCCCCCEEEcCCCcCccC-chhhhCCCCCcEEEccC
Q 014560 24 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS-SISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHS 101 (422)
Q Consensus 24 ~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~~~~l~~-~~~~~~~L~~L~l~~~~i~~l-~~~l~~~~~L~~L~l~~ 101 (422)
..++++.++..++++|..+. +++++|++++|.++.+|+ +|.++++|++|+++++.+..+ |..|.++++|++|++++
T Consensus 11 ~~~~~~C~~~~L~~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~ 88 (305)
T d1xkua_ 11 HLRVVQCSDLGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 88 (305)
T ss_dssp ETTEEECTTSCCCSCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCEEEecCCCCCccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccC
Confidence 44566666666666665543 467777777777776654 567777777777777777765 45567777777777777
Q ss_pred CcccccccccccceecEEEcCCCCCCCCCcc-ccccCCccEEEcCCCccccccccccCCCChHHHHHHHccCCCCccccc
Q 014560 102 NQLKEYCVEACQLRLSVLDLSNNSLSGLPPE-IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 180 (422)
Q Consensus 102 ~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 180 (422)
|.++.++.... ..+..+.+.++.+..++.. +........++...+.....
T Consensus 89 n~l~~l~~~~~-~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~---------------------------- 139 (305)
T d1xkua_ 89 NQLKELPEKMP-KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSS---------------------------- 139 (305)
T ss_dssp SCCSBCCSSCC-TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGG----------------------------
T ss_pred CccCcCccchh-hhhhhhhccccchhhhhhhhhhcccccccccccccccccc----------------------------
Confidence 76666554322 2345555555544443221 22333333443333321100
Q ss_pred cchhhhHHHhhhccccccceeeccCCCCCCCCcccccCCCccEEeCCCCccccCCccccCCCCCcEEEecCCcCCCCChH
Q 014560 181 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDA 260 (422)
Q Consensus 181 ~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~ 260 (422)
.. .+..+..+++|+.+++++|.+..++..
T Consensus 140 ----------------------------~~-----------------------~~~~~~~l~~L~~l~l~~n~l~~l~~~ 168 (305)
T d1xkua_ 140 ----------------------------GI-----------------------ENGAFQGMKKLSYIRIADTNITTIPQG 168 (305)
T ss_dssp ----------------------------GB-----------------------CTTGGGGCTTCCEEECCSSCCCSCCSS
T ss_pred ----------------------------CC-----------------------CccccccccccCccccccCCccccCcc
Confidence 00 111233334444444444444333321
Q ss_pred HHhcCCCCCEEECCCCCCCcCCCCCCCCCCCccEEEccCCcCCCCCCCCCCCCccCceEEeCCCcCccCCcccccCCCCc
Q 014560 261 ILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLR 340 (422)
Q Consensus 261 ~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~ 340 (422)
.+++|+.|+++++......+..|..++.++.|++++|.+.+..+..+..+++|++|++++|+++.+|.++.++++|+
T Consensus 169 ---~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~lp~~l~~l~~L~ 245 (305)
T d1xkua_ 169 ---LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQ 245 (305)
T ss_dssp ---CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCC
T ss_pred ---cCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeecccccccccccccccccCCC
Confidence 13445555555544444444445555555555555555555555555666666666666666666666666677777
Q ss_pred EEECCCCCCcccCc-------cCcCCCCCCEEeCCCCCCc--ccCCccccC
Q 014560 341 ILDLSQNSLQSIPE-------GFKNLTSLTELDLSDNNIS--ALPPELGLL 382 (422)
Q Consensus 341 ~l~l~~n~l~~l~~-------~~~~~~~L~~L~l~~n~l~--~~~~~~~~~ 382 (422)
.|++++|+|+.++. ......+|+.|++++|.++ .++...+.+
T Consensus 246 ~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~~~~~~~~f~~ 296 (305)
T d1xkua_ 246 VVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRC 296 (305)
T ss_dssp EEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTT
T ss_pred EEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCccCcCCHhHhcc
Confidence 77777777766532 2345667888888888765 555555544
No 5
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.90 E-value=6.3e-21 Score=171.42 Aligned_cols=97 Identities=29% Similarity=0.276 Sum_probs=47.6
Q ss_pred cccceecccccccCCchhhhccccCCeEeccCCccccCCCCCccCCCCCEEEcCCCcCccCchhhhCCCCCcEEEccCCc
Q 014560 24 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 103 (422)
Q Consensus 24 ~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~i~~l~~~l~~~~~L~~L~l~~~~ 103 (422)
++++|+++++.++.+|+. .++|++|++++|.++.+|+.+ .+|++|++.+|.++.+++. .+.|++|++++|.
T Consensus 39 ~l~~LdLs~~~L~~lp~~---~~~L~~L~Ls~N~l~~lp~~~---~~L~~L~l~~n~l~~l~~l---p~~L~~L~L~~n~ 109 (353)
T d1jl5a_ 39 QAHELELNNLGLSSLPEL---PPHLESLVASCNSLTELPELP---QSLKSLLVDNNNLKALSDL---PPLLEYLGVSNNQ 109 (353)
T ss_dssp TCSEEECTTSCCSCCCSC---CTTCSEEECCSSCCSSCCCCC---TTCCEEECCSSCCSCCCSC---CTTCCEEECCSSC
T ss_pred CCCEEEeCCCCCCCCCCC---CCCCCEEECCCCCCcccccch---hhhhhhhhhhcccchhhhh---ccccccccccccc
Confidence 455555555555555532 235555555555555555432 3455555555555544321 1245555555555
Q ss_pred ccccccccccceecEEEcCCCCCCCC
Q 014560 104 LKEYCVEACQLRLSVLDLSNNSLSGL 129 (422)
Q Consensus 104 ~~~l~~~~~~~~L~~L~l~~~~~~~~ 129 (422)
+..++.......|+.++++++.+...
T Consensus 110 l~~lp~~~~l~~L~~L~l~~~~~~~~ 135 (353)
T d1jl5a_ 110 LEKLPELQNSSFLKIIDVDNNSLKKL 135 (353)
T ss_dssp CSSCCCCTTCTTCCEEECCSSCCSCC
T ss_pred cccccchhhhccceeecccccccccc
Confidence 55554432222355555555554443
No 6
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=3.1e-22 Score=172.20 Aligned_cols=196 Identities=28% Similarity=0.376 Sum_probs=173.9
Q ss_pred cccceeeccCCCCCCCCcccccCCCccEEeCCCCccccCCc-cccCCCCCcEEEecCCcCCCCChHHHhcCCCCCEEECC
Q 014560 196 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP-ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274 (422)
Q Consensus 196 ~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~-~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~ 274 (422)
..+.+++.++..++.+|..+. +++++|++++|.++.++. .|.++++|++|++++|.++.++. +..+++|+.|+++
T Consensus 10 ~~~~~v~C~~~~L~~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~--~~~l~~L~~L~Ls 85 (266)
T d1p9ag_ 10 ASHLEVNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLS 85 (266)
T ss_dssp TTCCEEECTTSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEEECC
T ss_pred CCCeEEEccCCCCCeeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccccc--ccccccccccccc
Confidence 345678888889999987764 589999999999999875 48999999999999999987754 4678999999999
Q ss_pred CCCCCcCCCCCCCCCCCccEEEccCCcCCCCCCCCCCCCccCceEEeCCCcCccCCcc-cccCCCCcEEECCCCCCcccC
Q 014560 275 NNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD-ILRLQQLRILDLSQNSLQSIP 353 (422)
Q Consensus 275 ~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~-~~~~~~L~~l~l~~n~l~~l~ 353 (422)
+|++...+.. +..+++|+.++++++.+.......+..+.+++.+++.+|.+..++.. +..++.++.+++++|+++.++
T Consensus 86 ~N~l~~~~~~-~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~ 164 (266)
T d1p9ag_ 86 HNQLQSLPLL-GQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELP 164 (266)
T ss_dssp SSCCSSCCCC-TTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCC
T ss_pred cccccccccc-cccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccccccccC
Confidence 9999877654 88899999999999999988888889999999999999999988766 557899999999999999885
Q ss_pred -ccCcCCCCCCEEeCCCCCCcccCCccccCCccccEEEccCCCCC
Q 014560 354 -EGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLR 397 (422)
Q Consensus 354 -~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~~~ 397 (422)
+.|..+++|++|+|++|+|+.+|..++.. ++|+.|++++|++.
T Consensus 165 ~~~~~~l~~L~~L~Ls~N~L~~lp~~~~~~-~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 165 AGLLNGLENLDTLLLQENSLYTIPKGFFGS-HLLPFAFLHGNPWL 208 (266)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTT-CCCSEEECCSCCBC
T ss_pred ccccccccccceeecccCCCcccChhHCCC-CCCCEEEecCCCCC
Confidence 45889999999999999999999999988 99999999999986
No 7
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=4.1e-21 Score=166.99 Aligned_cols=203 Identities=29% Similarity=0.394 Sum_probs=177.9
Q ss_pred cccceeeccCCCCCCCCcc-cccCCCccEEeCCCCccccCCcc-ccCCCCCcEEEec-CCcCCCCChHHHhcCCCCCEEE
Q 014560 196 VTSKELSLEGMNLSAIPSE-IWEAGEITKLDLSRNSIQELPPE-LSSCASLQTLILS-RNKIKDWPDAILTSLSSLSCLK 272 (422)
Q Consensus 196 ~~l~~l~l~~~~~~~~~~~-~~~~~~L~~L~l~~~~l~~~~~~-~~~~~~L~~L~l~-~~~~~~~~~~~~~~~~~L~~L~ 272 (422)
.+++.|++++|.+..++.. +..+++|++|+++++.+..++.. +..++.++.+.+. .+.+..+++..|..+++|++++
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 4678999999999988864 56689999999999999886544 6678889998775 4578888888889999999999
Q ss_pred CCCCCCCcCCCCCCCCCCCccEEEccCCcCCCCCCCCCCCCccCceEEeCCCcCccCCc-ccccCCCCcEEECCCCCCcc
Q 014560 273 LDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPT-DILRLQQLRILDLSQNSLQS 351 (422)
Q Consensus 273 l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~-~~~~~~~L~~l~l~~n~l~~ 351 (422)
++.+.+..+....+...++|+.+++++|.++.+....|..+++|+.|++++|.+..++. .+.++++|+.+++++|+++.
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~ 191 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred cCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccc
Confidence 99999988888888899999999999999999888889999999999999999997754 47789999999999999997
Q ss_pred c-CccCcCCCCCCEEeCCCCCCcccCCccccCCccccEEEccCCCCCc
Q 014560 352 I-PEGFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRS 398 (422)
Q Consensus 352 l-~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~~~~ 398 (422)
+ |..|.++++|+.|++++|.++.++...+..+++|+++++++|++..
T Consensus 192 i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred cChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCC
Confidence 6 7789999999999999999998887776666999999999999874
No 8
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.88 E-value=4.8e-20 Score=165.56 Aligned_cols=135 Identities=27% Similarity=0.315 Sum_probs=70.4
Q ss_pred CceeeccCCcceecChhHHhhcccccceecccccccCCchhhhccccCCeEeccCCccccCCCCCccCCCCCEEEcCCCc
Q 014560 1 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 80 (422)
Q Consensus 1 L~~L~ls~~~i~~i~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~ 80 (422)
+++|||++++++.+|+. .++|++|++++|.++.+|+.+ .+|+.|++++|.++.+++. .+.|++|++++|.
T Consensus 40 l~~LdLs~~~L~~lp~~----~~~L~~L~Ls~N~l~~lp~~~---~~L~~L~l~~n~l~~l~~l---p~~L~~L~L~~n~ 109 (353)
T d1jl5a_ 40 AHELELNNLGLSSLPEL----PPHLESLVASCNSLTELPELP---QSLKSLLVDNNNLKALSDL---PPLLEYLGVSNNQ 109 (353)
T ss_dssp CSEEECTTSCCSCCCSC----CTTCSEEECCSSCCSSCCCCC---TTCCEEECCSSCCSCCCSC---CTTCCEEECCSSC
T ss_pred CCEEEeCCCCCCCCCCC----CCCCCEEECCCCCCcccccch---hhhhhhhhhhcccchhhhh---ccccccccccccc
Confidence 34566666666666531 345666666666666665432 3566666666665555432 1346666666666
Q ss_pred CccCchhhhCCCCCcEEEccCCcccccccccccceecEEEcCCCCCCCCCccccccCCccEEEcCCCcc
Q 014560 81 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 149 (422)
Q Consensus 81 i~~l~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~ 149 (422)
+..+|. ++.+++|++|+++++.+...+... ..+..+.+..+..... ..+..++.++.+++..+..
T Consensus 110 l~~lp~-~~~l~~L~~L~l~~~~~~~~~~~~--~~l~~l~~~~~~~~~~-~~l~~l~~l~~L~l~~n~~ 174 (353)
T d1jl5a_ 110 LEKLPE-LQNSSFLKIIDVDNNSLKKLPDLP--PSLEFIAAGNNQLEEL-PELQNLPFLTAIYADNNSL 174 (353)
T ss_dssp CSSCCC-CTTCTTCCEEECCSSCCSCCCCCC--TTCCEEECCSSCCSSC-CCCTTCTTCCEEECCSSCC
T ss_pred cccccc-hhhhccceeecccccccccccccc--ccccchhhcccccccc-ccccccccceecccccccc
Confidence 666553 455666666666665555433321 1244444444333221 2244455555555555544
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=4.2e-21 Score=165.05 Aligned_cols=132 Identities=27% Similarity=0.304 Sum_probs=98.6
Q ss_pred CCccEEeCCCCccccCCccccCCCCCcEEEecCCcCCCCChHHHhcCCCCCEEECCCCCCCcCCCCCCCCCCCccEEEcc
Q 014560 219 GEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298 (422)
Q Consensus 219 ~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~ 298 (422)
++|++|++++|.+...+..+..+++|+.++++++.+..+....+..+.+++.+++++|.+..+++..+..+++++.++++
T Consensus 77 ~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~ 156 (266)
T d1p9ag_ 77 PVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLA 156 (266)
T ss_dssp TTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred ccccccccccccccccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccc
Confidence 35555566666555555556666777777777777776666666677777888888777777777777777888888888
Q ss_pred CCcCCCCCCCCCCCCccCceEEeCCCcCccCCcccccCCCCcEEECCCCCCc
Q 014560 299 YNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ 350 (422)
Q Consensus 299 ~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~l~l~~n~l~ 350 (422)
+|.+++..+..+..+++|++|++++|.++.+|..+..+++|+.|++++|.+.
T Consensus 157 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 157 NNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp TSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBC
T ss_pred cccccccCccccccccccceeecccCCCcccChhHCCCCCCCEEEecCCCCC
Confidence 8888777777777888888888888888888887778888888888887654
No 10
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.87 E-value=1.4e-22 Score=179.17 Aligned_cols=248 Identities=24% Similarity=0.319 Sum_probs=158.2
Q ss_pred ccCCeEeccCCccc---cCCCCCccCCCCCEEEcCC-CcCc-cCchhhhCCCCCcEEEccCCcccccccccccceecEEE
Q 014560 46 SRLIRLDLHQNRIL---SIPSSISGCCSLAEFYMGN-NALS-ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 120 (422)
Q Consensus 46 ~~L~~L~l~~~~~~---~l~~~~~~~~~L~~L~l~~-~~i~-~l~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~L~~L~ 120 (422)
.+++.|+++++.+. .+|+.+.++++|++|++++ |.+. .+|..+.++++|++|++++|.+..++..
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~---------- 119 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPD---------- 119 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCG----------
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccc----------
Confidence 36888888888766 4778888888888888875 5665 7888888888888888888877754433
Q ss_pred cCCCCCCCCCccccccCCccEEEcCCCccccccccccCCCChHHHHHHHccCCCCccccccchhhhHHHhhhccccccce
Q 014560 121 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 200 (422)
Q Consensus 121 l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 200 (422)
.+..+.+|+.++++.|.+.
T Consensus 120 -----------~~~~~~~L~~l~l~~N~~~-------------------------------------------------- 138 (313)
T d1ogqa_ 120 -----------FLSQIKTLVTLDFSYNALS-------------------------------------------------- 138 (313)
T ss_dssp -----------GGGGCTTCCEEECCSSEEE--------------------------------------------------
T ss_pred -----------cccchhhhccccccccccc--------------------------------------------------
Confidence 2333444444444444321
Q ss_pred eeccCCCCCCCCcccccCCCccEEeCCCCcccc-CCccccCCCCC-cEEEecCCcCCCCChHHHhcCCCCCEEECCCCCC
Q 014560 201 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE-LPPELSSCASL-QTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPL 278 (422)
Q Consensus 201 l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~-~~~~~~~~~~L-~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 278 (422)
..+|..+..++.++.+++++|.+.. +|..+..+..+ +.+++++|.+....+..+..+. ...+++..+..
T Consensus 139 --------~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~-~~~l~l~~~~~ 209 (313)
T d1ogqa_ 139 --------GTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp --------SCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred --------ccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccc-ccccccccccc
Confidence 1122233334444555555544432 44444444443 4555555555544443333333 33466655554
Q ss_pred CcCCCCCCCCCCCccEEEccCCcCCCCCCCCCCCCccCceEEeCCCcCc-cCCcccccCCCCcEEECCCCCCc-ccCccC
Q 014560 279 RQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLR-EAPTDILRLQQLRILDLSQNSLQ-SIPEGF 356 (422)
Q Consensus 279 ~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~-~l~~~~~~~~~L~~l~l~~n~l~-~l~~~~ 356 (422)
....+..+..+++++.+++.++.+.+..+ .+..+++|+.|++++|+++ .+|..++++++|+.|++++|.++ .+|+ +
T Consensus 210 ~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~ 287 (313)
T d1ogqa_ 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-G 287 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-S
T ss_pred ccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-c
Confidence 44444445566777777777776655433 3566778888888888888 78888888899999999999888 6775 5
Q ss_pred cCCCCCCEEeCCCCC-Cccc
Q 014560 357 KNLTSLTELDLSDNN-ISAL 375 (422)
Q Consensus 357 ~~~~~L~~L~l~~n~-l~~~ 375 (422)
.++++|+.+++++|+ +...
T Consensus 288 ~~L~~L~~l~l~~N~~l~g~ 307 (313)
T d1ogqa_ 288 GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp TTGGGSCGGGTCSSSEEEST
T ss_pred ccCCCCCHHHhCCCccccCC
Confidence 678889999999886 4443
No 11
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.87 E-value=4.7e-22 Score=175.70 Aligned_cols=241 Identities=22% Similarity=0.265 Sum_probs=147.6
Q ss_pred cccceeccccccc---CCchhhhccccCCeEeccC-Cccc-cCCCCCccCCCCCEEEcCCCcCccC-chhhhCCCCCcEE
Q 014560 24 MLTELIASKNLLN---GMPETIGSLSRLIRLDLHQ-NRIL-SIPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTL 97 (422)
Q Consensus 24 ~L~~L~l~~~~i~---~~~~~~~~~~~L~~L~l~~-~~~~-~l~~~~~~~~~L~~L~l~~~~i~~l-~~~l~~~~~L~~L 97 (422)
.++.|+++++.+. .+|+.+.++++|++|++++ |.+. .+|+.+.++++|++|++++|.+..+ +..+..++.|+++
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l 130 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhccc
Confidence 5677777777664 3567777777777777765 5555 6677777777777777777777643 4556777777777
Q ss_pred EccCCccc-ccccccccce-ecEEEcCCCCCCC-CCccccccCCc-cEEEcCCCccccccccccCCCChHHHHHHHccCC
Q 014560 98 DLHSNQLK-EYCVEACQLR-LSVLDLSNNSLSG-LPPEIGKMTTL-RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 173 (422)
Q Consensus 98 ~l~~~~~~-~l~~~~~~~~-L~~L~l~~~~~~~-~~~~~~~l~~L-~~L~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 173 (422)
++++|.+. .+|..+.... ++.+++++|.+.+ +|..+..+.++ +.+++..|.++......
T Consensus 131 ~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~----------------- 193 (313)
T d1ogqa_ 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT----------------- 193 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGG-----------------
T ss_pred ccccccccccCchhhccCcccceeecccccccccccccccccccccccccccccccccccccc-----------------
Confidence 77777655 3444444444 7777777777765 67777776665 67777777664321111
Q ss_pred CCccccccchhhhHHHhhhccccccceeeccCCCCCCCCcccccCCCccEEeCCCCcccc-CCccccCCCCCcEEEecCC
Q 014560 174 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE-LPPELSSCASLQTLILSRN 252 (422)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~-~~~~~~~~~~L~~L~l~~~ 252 (422)
+... ....+++..+.... +|..+..+++++.+++.++
T Consensus 194 -----------------------------------------~~~l-~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~ 231 (313)
T d1ogqa_ 194 -----------------------------------------FANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKN 231 (313)
T ss_dssp -----------------------------------------GGGC-CCSEEECCSSEEEECCGGGCCTTSCCSEEECCSS
T ss_pred -----------------------------------------cccc-cccccccccccccccccccccccccccccccccc
Confidence 1111 22345555544433 3444555566666666666
Q ss_pred cCCCCChHHHhcCCCCCEEECCCCCCCcCCCCCCCCCCCccEEEccCCcCCCCCCCCCCCCccCceEEeCCCc
Q 014560 253 KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQ 325 (422)
Q Consensus 253 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 325 (422)
.+....+. +..+++|+.|++++|++....+..+..+++|++|++++|.+++..+ .+..+.+|+.+++.+|+
T Consensus 232 ~l~~~~~~-~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP-~~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 232 SLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNK 302 (313)
T ss_dssp EECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC-CSTTGGGSCGGGTCSSS
T ss_pred cccccccc-cccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCC-CcccCCCCCHHHhCCCc
Confidence 55543332 4555666666666666663333346666666666666666665443 24556677777777764
No 12
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=6.7e-20 Score=159.24 Aligned_cols=206 Identities=29% Similarity=0.333 Sum_probs=179.2
Q ss_pred ceeeccCCCCCCCCcccccCCCccEEeCCCCccccCCc-cccCCCCCcEEEecCCcCCCCChHHHhcCCCCCEEECC-CC
Q 014560 199 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP-ELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD-NN 276 (422)
Q Consensus 199 ~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~-~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~-~~ 276 (422)
..+..++.+++.+|..+. +.+++|++++|+++.+|+ .|.++++|++++++++.+..++...+..+..++.+.+. .+
T Consensus 14 ~~v~c~~~~L~~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~ 91 (284)
T d1ozna_ 14 VTTSCPQQGLQAVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91 (284)
T ss_dssp CEEECCSSCCSSCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred eEEEcCCCCCCccCCCCC--CCCCEEECcCCcCCCCCHHHhhcccccccccccccccccccccccccccccccccccccc
Confidence 356677777888887654 578999999999999876 48999999999999999999888888889999998875 45
Q ss_pred CCCcCCCCCCCCCCCccEEEccCCcCCCCCCCCCCCCccCceEEeCCCcCccCCcc-cccCCCCcEEECCCCCCcccC-c
Q 014560 277 PLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTD-ILRLQQLRILDLSQNSLQSIP-E 354 (422)
Q Consensus 277 ~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~-~~~~~~L~~l~l~~n~l~~l~-~ 354 (422)
.+..+++..|..+++|+.+++++|.+.......+...++|+.+++.+|.++.++.. +..+++|+.|++++|.++.++ .
T Consensus 92 ~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~ 171 (284)
T d1ozna_ 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER 171 (284)
T ss_dssp TCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred ccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchh
Confidence 67788888899999999999999999888788888899999999999999988654 668899999999999999874 5
Q ss_pred cCcCCCCCCEEeCCCCCCcccCCccccCCccccEEEccCCCCCccchHHHhh
Q 014560 355 GFKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDR 406 (422)
Q Consensus 355 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~n~~~~i~~~~~~~ 406 (422)
.|.++++|+.+++++|+++.++...+..+++++.|++++|.+..+++.+|..
T Consensus 172 ~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~ 223 (284)
T d1ozna_ 172 AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAP 223 (284)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTT
T ss_pred hhccccccchhhhhhccccccChhHhhhhhhccccccccccccccccccccc
Confidence 6899999999999999999776555555599999999999999999988865
No 13
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=4.7e-22 Score=185.47 Aligned_cols=367 Identities=19% Similarity=0.189 Sum_probs=234.9
Q ss_pred CceeeccCCcceecC-hhHHhhcccccceecccccccC-----CchhhhccccCCeEeccCCccc-----cCCCCCc-cC
Q 014560 1 MSKLDVEGNKLTVLS-NNLIASWTMLTELIASKNLLNG-----MPETIGSLSRLIRLDLHQNRIL-----SIPSSIS-GC 68 (422)
Q Consensus 1 L~~L~ls~~~i~~i~-~~~~~~~~~L~~L~l~~~~i~~-----~~~~~~~~~~L~~L~l~~~~~~-----~l~~~~~-~~ 68 (422)
|++||++++++++.. ...+..++++++|+|++|.++. ++..+..+++|++|++++|.++ .+...+. ..
T Consensus 4 l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~ 83 (460)
T d1z7xw1 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPS 83 (460)
T ss_dssp EEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTT
T ss_pred CCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCC
Confidence 578999999999754 3357888999999999999863 3566789999999999999875 2223332 34
Q ss_pred CCCCEEEcCCCcCcc-----CchhhhCCCCCcEEEccCCcccccccc-----cccce--ecEEEcCCCCCCC-----CCc
Q 014560 69 CSLAEFYMGNNALSA-----LPAELGKLSKLGTLDLHSNQLKEYCVE-----ACQLR--LSVLDLSNNSLSG-----LPP 131 (422)
Q Consensus 69 ~~L~~L~l~~~~i~~-----l~~~l~~~~~L~~L~l~~~~~~~l~~~-----~~~~~--L~~L~l~~~~~~~-----~~~ 131 (422)
.+|++|++++|.++. ++..+..+++|++|++++|.+...... ..... ............. ...
T Consensus 84 ~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (460)
T d1z7xw1 84 CKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLAS 163 (460)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhhccccc
Confidence 589999999999873 456688899999999999987742211 11111 2233333322221 111
Q ss_pred cccccCCccEEEcCCCccccccccccCCCChHHHHHHHccCCCCccccccchhhhHHHhhhccccccceeeccCCCCCCC
Q 014560 132 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 211 (422)
Q Consensus 132 ~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~ 211 (422)
.+.....++.++++++....... ................+....+.....
T Consensus 164 ~l~~~~~~~~~~ls~~~~~~~~~------------------------------~~~~~~l~~~~~~~~~l~~~~~~~~~~ 213 (460)
T d1z7xw1 164 VLRAKPDFKELTVSNNDINEAGV------------------------------RVLCQGLKDSPCQLEALKLESCGVTSD 213 (460)
T ss_dssp HHHHCTTCCEEECCSSBCHHHHH------------------------------HHHHHHHHHSCCCCCEEECTTSCCBTT
T ss_pred ccccccccccccccccccccccc------------------------------cccccccccccccccccccccccccch
Confidence 23445666777776654421100 000111111222334444444433311
Q ss_pred -----CcccccCCCccEEeCCCCcccc------CCccccCCCCCcEEEecCCcCCCCCh----HHHhcCCCCCEEECCCC
Q 014560 212 -----PSEIWEAGEITKLDLSRNSIQE------LPPELSSCASLQTLILSRNKIKDWPD----AILTSLSSLSCLKLDNN 276 (422)
Q Consensus 212 -----~~~~~~~~~L~~L~l~~~~l~~------~~~~~~~~~~L~~L~l~~~~~~~~~~----~~~~~~~~L~~L~l~~~ 276 (422)
...+...+.++.+.+.++.+.. ..........++.+++++|.+..... ..+...+.++.++++++
T Consensus 214 ~~~~~~~~l~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n 293 (460)
T d1z7xw1 214 NCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGN 293 (460)
T ss_dssp HHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTC
T ss_pred hhhcccccccccccccccchhhccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccc
Confidence 1122345677888888876542 22234456789999999887665332 22356788999999888
Q ss_pred CCCcCCC-----CCCCCCCCccEEEccCCcCCCCCCCC----CCCCccCceEEeCCCcCcc-----CCcccc-cCCCCcE
Q 014560 277 PLRQVPS-----DGFKDIPMLQILDLSYNIASLPENPP----FSSLPHLQELYLRRMQLRE-----APTDIL-RLQQLRI 341 (422)
Q Consensus 277 ~~~~~~~-----~~~~~~~~L~~l~l~~~~~~~~~~~~----~~~~~~L~~L~l~~~~i~~-----l~~~~~-~~~~L~~ 341 (422)
.++.... ........|+.++++++.++...... +..+++|++|++++|.++. +...+. ..+.|+.
T Consensus 294 ~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~ 373 (460)
T d1z7xw1 294 ELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRV 373 (460)
T ss_dssp CCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCE
T ss_pred cccccccchhhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCE
Confidence 7753111 11123467899999988776443222 2345789999999998862 333333 4678999
Q ss_pred EECCCCCCcc-----cCccCcCCCCCCEEeCCCCCCcc-----cCCccccCCccccEEEccCCCCC
Q 014560 342 LDLSQNSLQS-----IPEGFKNLTSLTELDLSDNNISA-----LPPELGLLEPSLQALRLDGNPLR 397 (422)
Q Consensus 342 l~l~~n~l~~-----l~~~~~~~~~L~~L~l~~n~l~~-----~~~~~~~~~~~L~~l~l~~n~~~ 397 (422)
|++++|.++. +++.+..+++|++|++++|.|+. +...+......|+.+++.++.+.
T Consensus 374 L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~ 439 (460)
T d1z7xw1 374 LWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 439 (460)
T ss_dssp EECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred EECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCC
Confidence 9999999973 56667888999999999999872 22233333257999999999886
No 14
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.81 E-value=5.1e-19 Score=148.20 Aligned_cols=204 Identities=23% Similarity=0.340 Sum_probs=126.6
Q ss_pred cceecccccccCCchhhhccccCCeEeccCCccccCCCCCccCCCCCEEEcCCCcCccCchhhhCCCCCcEEEccCCccc
Q 014560 26 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 105 (422)
Q Consensus 26 ~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~i~~l~~~l~~~~~L~~L~l~~~~~~ 105 (422)
..++++.+.+..+. ....+.+|++|++++|.++.+ +.+..+++|++|++++|.+..++. +..+++|+.+++++|.++
T Consensus 22 ~~~~l~~~~~~d~~-~~~~l~~L~~L~l~~~~i~~l-~~l~~l~~L~~L~ls~n~i~~~~~-l~~l~~l~~l~~~~n~~~ 98 (227)
T d1h6ua2 22 IKIAAGKSNVTDTV-TQADLDGITTLSAFGTGVTTI-EGVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLK 98 (227)
T ss_dssp HHHHTTCSSTTSEE-CHHHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCS
T ss_pred HHHHhCCCCcCCcC-CHHHcCCcCEEECCCCCCCcc-hhHhcCCCCcEeecCCceeecccc-cccccccccccccccccc
Confidence 34455555554332 334556667777776666666 346666777777777766665532 666667777777666666
Q ss_pred ccccccccceecEEEcCCCCCCCCCccccccCCccEEEcCCCccccccccccCCCChHHHHHHHccCCCCccccccchhh
Q 014560 106 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 185 (422)
Q Consensus 106 ~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 185 (422)
.++.......|+.+.++++...... .+...+.++.+.++++.+...
T Consensus 99 ~i~~l~~l~~L~~l~l~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~--------------------------------- 144 (227)
T d1h6ua2 99 NVSAIAGLQSIKTLDLTSTQITDVT-PLAGLSNLQVLYLDLNQITNI--------------------------------- 144 (227)
T ss_dssp CCGGGTTCTTCCEEECTTSCCCCCG-GGTTCTTCCEEECCSSCCCCC---------------------------------
T ss_pred ccccccccccccccccccccccccc-hhccccchhhhhchhhhhchh---------------------------------
Confidence 5554333333666777666655442 355566677776665544211
Q ss_pred hHHHhhhccccccceeeccCCCCCCCCcccccCCCccEEeCCCCccccCCccccCCCCCcEEEecCCcCCCCChHHHhcC
Q 014560 186 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSL 265 (422)
Q Consensus 186 ~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~ 265 (422)
..+..+++++.|.+++|.+...+ .+.++++|+.|++++|.++++++ +..+
T Consensus 145 ---------------------------~~~~~~~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~Ls~n~l~~l~~--l~~l 194 (227)
T d1h6ua2 145 ---------------------------SPLAGLTNLQYLSIGNAQVSDLT-PLANLSKLTTLKADDNKISDISP--LASL 194 (227)
T ss_dssp ---------------------------GGGGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGC
T ss_pred ---------------------------hhhccccccccccccccccccch-hhcccccceecccCCCccCCChh--hcCC
Confidence 11234456777777777665543 36677778888887777776643 5677
Q ss_pred CCCCEEECCCCCCCcCCCCCCCCCCCccEEEcc
Q 014560 266 SSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLS 298 (422)
Q Consensus 266 ~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~ 298 (422)
++|++|++++|+++.+++ +.++++|+.|+++
T Consensus 195 ~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~ls 225 (227)
T d1h6ua2 195 PNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225 (227)
T ss_dssp TTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred CCCCEEECcCCcCCCCcc--cccCCCCCEEEee
Confidence 788888888777777654 6777788877775
No 15
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.79 E-value=2e-18 Score=144.51 Aligned_cols=201 Identities=24% Similarity=0.324 Sum_probs=134.5
Q ss_pred eccCCcceecChhHHhhcccccceecccccccCCchhhhccccCCeEeccCCccccCCCCCccCCCCCEEEcCCCcCccC
Q 014560 5 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 84 (422)
Q Consensus 5 ~ls~~~i~~i~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~i~~l 84 (422)
+++.+++.++.. ++.+.+|+.|++.+|.++.++ .+..+++|++|++++|.++.++ .+..+++|+.++++++.++.+
T Consensus 25 ~l~~~~~~d~~~--~~~l~~L~~L~l~~~~i~~l~-~l~~l~~L~~L~ls~n~i~~~~-~l~~l~~l~~l~~~~n~~~~i 100 (227)
T d1h6ua2 25 AAGKSNVTDTVT--QADLDGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQITDLA-PLKNLTKITELELSGNPLKNV 100 (227)
T ss_dssp HTTCSSTTSEEC--HHHHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCG-GGTTCCSCCEEECCSCCCSCC
T ss_pred HhCCCCcCCcCC--HHHcCCcCEEECCCCCCCcch-hHhcCCCCcEeecCCceeeccc-ccccccccccccccccccccc
Confidence 445555554432 566777777777777777763 5777777777777777777663 367777777777777777766
Q ss_pred chhhhCCCCCcEEEccCCcccccccccccceecEEEcCCCCCCCCCccccccCCccEEEcCCCccccccccccCCCChHH
Q 014560 85 PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 164 (422)
Q Consensus 85 ~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~ 164 (422)
+ .+..+++|+.++++++....+........+..+.++++.+.... .+..+++|+++++.+|.+...
T Consensus 101 ~-~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~L~~L~l~~n~~~~~------------ 166 (227)
T d1h6ua2 101 S-AIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNIS-PLAGLTNLQYLSIGNAQVSDL------------ 166 (227)
T ss_dssp G-GGTTCTTCCEEECTTSCCCCCGGGTTCTTCCEEECCSSCCCCCG-GGGGCTTCCEEECCSSCCCCC------------
T ss_pred c-cccccccccccccccccccccchhccccchhhhhchhhhhchhh-hhccccccccccccccccccc------------
Confidence 4 46677777777777777666555444445777777776665532 356667777777766654221
Q ss_pred HHHHHccCCCCccccccchhhhHHHhhhccccccceeeccCCCCCCCCcccccCCCccEEeCCCCccccCCccccCCCCC
Q 014560 165 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 244 (422)
Q Consensus 165 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L 244 (422)
..+.++++|++|++++|.++.+++ +.++++|
T Consensus 167 ------------------------------------------------~~l~~l~~L~~L~Ls~n~l~~l~~-l~~l~~L 197 (227)
T d1h6ua2 167 ------------------------------------------------TPLANLSKLTTLKADDNKISDISP-LASLPNL 197 (227)
T ss_dssp ------------------------------------------------GGGTTCTTCCEEECCSSCCCCCGG-GGGCTTC
T ss_pred ------------------------------------------------hhhcccccceecccCCCccCCChh-hcCCCCC
Confidence 113345677777777777776643 6777777
Q ss_pred cEEEecCCcCCCCChHHHhcCCCCCEEECC
Q 014560 245 QTLILSRNKIKDWPDAILTSLSSLSCLKLD 274 (422)
Q Consensus 245 ~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~ 274 (422)
++|++++|.++++++ ++.+++|+.|+++
T Consensus 198 ~~L~Ls~N~lt~i~~--l~~l~~L~~L~ls 225 (227)
T d1h6ua2 198 IEVHLKNNQISDVSP--LANTSNLFIVTLT 225 (227)
T ss_dssp CEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred CEEECcCCcCCCCcc--cccCCCCCEEEee
Confidence 777777777777653 5677777777765
No 16
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.75 E-value=1.7e-17 Score=136.67 Aligned_cols=184 Identities=23% Similarity=0.329 Sum_probs=133.3
Q ss_pred cccceecccccccCCchhhhccccCCeEeccCCccccCCCCCccCCCCCEEEcCCCcCccCchhhhCCCCCcEEEccCCc
Q 014560 24 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 103 (422)
Q Consensus 24 ~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~i~~l~~~l~~~~~L~~L~l~~~~ 103 (422)
+.....+..+.++.... ...+.+|++|++++|.++.++ .++.+++|++|++++|.++.++. +..+++|++|++++|.
T Consensus 25 ~~i~~~l~~~~~~~~~~-~~~L~~L~~L~l~~~~i~~l~-~l~~l~~L~~L~L~~n~i~~l~~-~~~l~~L~~L~l~~n~ 101 (210)
T d1h6ta2 25 ETIKDNLKKKSVTDAVT-QNELNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENK 101 (210)
T ss_dssp HHHHHHTTCSCTTSEEC-HHHHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred HHHHHHhCcCccCCccC-HHHhcCccEEECcCCCCCCch-hHhhCCCCCEEeCCCccccCccc-cccCcccccccccccc
Confidence 33445566666644321 234678888999988888775 47888899999999998888763 6788899999999888
Q ss_pred ccccccccccceecEEEcCCCCCCCCCccccccCCccEEEcCCCccccccccccCCCChHHHHHHHccCCCCccccccch
Q 014560 104 LKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183 (422)
Q Consensus 104 ~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (422)
+++++......+|+.++++++.+..++ .+..+++++.+++.+|.++..
T Consensus 102 i~~l~~l~~l~~L~~L~l~~~~~~~~~-~l~~l~~l~~l~~~~n~l~~~------------------------------- 149 (210)
T d1h6ta2 102 VKDLSSLKDLKKLKSLSLEHNGISDIN-GLVHLPQLESLYLGNNKITDI------------------------------- 149 (210)
T ss_dssp CCCGGGGTTCTTCCEEECTTSCCCCCG-GGGGCTTCCEEECCSSCCCCC-------------------------------
T ss_pred ccccccccccccccccccccccccccc-ccccccccccccccccccccc-------------------------------
Confidence 888775443445899999888877654 478888999998888876422
Q ss_pred hhhHHHhhhccccccceeeccCCCCCCCCcccccCCCccEEeCCCCccccCCccccCCCCCcEEEecCCcCCCCChHHHh
Q 014560 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263 (422)
Q Consensus 184 ~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 263 (422)
.....+++|+.+++++|.++.+++ +.++++|++|++++|.+++++ .+.
T Consensus 150 -----------------------------~~~~~l~~L~~l~l~~n~l~~i~~-l~~l~~L~~L~Ls~N~i~~l~--~l~ 197 (210)
T d1h6ta2 150 -----------------------------TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDLR--ALA 197 (210)
T ss_dssp -----------------------------GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBCG--GGT
T ss_pred -----------------------------cccccccccccccccccccccccc-ccCCCCCCEEECCCCCCCCCh--hhc
Confidence 122345677788888877776653 677788888888888777764 367
Q ss_pred cCCCCCEEECC
Q 014560 264 SLSSLSCLKLD 274 (422)
Q Consensus 264 ~~~~L~~L~l~ 274 (422)
.+++|+.|+++
T Consensus 198 ~l~~L~~L~Ls 208 (210)
T d1h6ta2 198 GLKNLDVLELF 208 (210)
T ss_dssp TCTTCSEEEEE
T ss_pred CCCCCCEEEcc
Confidence 77888888775
No 17
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.75 E-value=1.4e-17 Score=136.09 Aligned_cols=181 Identities=24% Similarity=0.349 Sum_probs=123.1
Q ss_pred cccceecccccccCCchhhhccccCCeEeccCCccccCCCCCccCCCCCEEEcCCCcCccCchhhhCCCCCcEEEccCCc
Q 014560 24 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 103 (422)
Q Consensus 24 ~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~i~~l~~~l~~~~~L~~L~l~~~~ 103 (422)
+.....++.+.+.... ....+.++++|+++++.++.++ .++.+++|++|++++|.++.++. +.++++|++|++++|.
T Consensus 19 ~~i~~~l~~~~~~~~~-~~~~l~~l~~L~l~~~~i~~l~-~l~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~~n~ 95 (199)
T d2omxa2 19 EKMKTVLGKTNVTDTV-SQTDLDQVTTLQADRLGIKSID-GVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQ 95 (199)
T ss_dssp HHHHHHTTCSSTTSEE-CHHHHTTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred HHHHHHhCCCCCCCcc-CHHHhcCCCEEECCCCCCCCcc-ccccCCCcCcCccccccccCccc-ccCCcccccccccccc
Confidence 3344455555554432 2235567777777777777763 46777777777777777777654 7777777777777777
Q ss_pred ccccccccccceecEEEcCCCCCCCCCccccccCCccEEEcCCCccccccccccCCCChHHHHHHHccCCCCccccccch
Q 014560 104 LKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 183 (422)
Q Consensus 104 ~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (422)
+..++.......|+.++++++.....+ .+..+++|+.+++++|.+..+
T Consensus 96 ~~~~~~l~~l~~L~~L~l~~~~~~~~~-~~~~l~~L~~L~l~~n~l~~~------------------------------- 143 (199)
T d2omxa2 96 IADITPLANLTNLTGLTLFNNQITDID-PLKNLTNLNRLELSSNTISDI------------------------------- 143 (199)
T ss_dssp CCCCGGGTTCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCSSCCCCC-------------------------------
T ss_pred ccccccccccccccccccccccccccc-ccchhhhhHHhhhhhhhhccc-------------------------------
Confidence 776665333334777777777766543 467788888888888766432
Q ss_pred hhhHHHhhhccccccceeeccCCCCCCCCcccccCCCccEEeCCCCccccCCccccCCCCCcEEEecCCcCCCCChHHHh
Q 014560 184 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILT 263 (422)
Q Consensus 184 ~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 263 (422)
..+..+++++.|++.+|.++.+++ +.++++|++|++++|.+++++. +.
T Consensus 144 -----------------------------~~l~~~~~L~~L~l~~n~l~~l~~-l~~l~~L~~L~ls~N~i~~i~~--l~ 191 (199)
T d2omxa2 144 -----------------------------SALSGLTSLQQLNFSSNQVTDLKP-LANLTTLERLDISSNKVSDISV--LA 191 (199)
T ss_dssp -----------------------------GGGTTCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GG
T ss_pred -----------------------------ccccccccccccccccccccCCcc-ccCCCCCCEEECCCCCCCCCcc--cc
Confidence 123445678888888888777653 7788888888888888877643 56
Q ss_pred cCCCCCEE
Q 014560 264 SLSSLSCL 271 (422)
Q Consensus 264 ~~~~L~~L 271 (422)
.+++|++|
T Consensus 192 ~L~~L~~L 199 (199)
T d2omxa2 192 KLTNLESL 199 (199)
T ss_dssp GCTTCSEE
T ss_pred CCCCCCcC
Confidence 77777765
No 18
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.74 E-value=3.8e-17 Score=133.40 Aligned_cols=162 Identities=25% Similarity=0.395 Sum_probs=130.1
Q ss_pred cCCCccEEeCCCCccccCCccccCCCCCcEEEecCCcCCCCChHHHhcCCCCCEEECCCCCCCcCCCCCCCCCCCccEEE
Q 014560 217 EAGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILD 296 (422)
Q Consensus 217 ~~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~ 296 (422)
.+.++++|+++++.+++++ .+..+++|++|++++|.+++.++ +..+++|+.|+++.|.+..+++ +..++.|+.++
T Consensus 38 ~l~~l~~L~l~~~~i~~l~-~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~~~~--l~~l~~L~~L~ 112 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKSID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 112 (199)
T ss_dssp HHTTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred HhcCCCEEECCCCCCCCcc-ccccCCCcCcCccccccccCccc--ccCCcccccccccccccccccc--ccccccccccc
Confidence 3568889999999888875 47788999999999998888764 6888999999999888877754 77889999999
Q ss_pred ccCCcCCCCCCCCCCCCccCceEEeCCCcCccCCcccccCCCCcEEECCCCCCcccCccCcCCCCCCEEeCCCCCCcccC
Q 014560 297 LSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALP 376 (422)
Q Consensus 297 l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~l~l~~n~l~~l~~~~~~~~~L~~L~l~~n~l~~~~ 376 (422)
++++...... .+..+++|+.+++++|.+..++ .+..+++|+.+++.+|.++.++ .+.++++|+.|++++|+++.++
T Consensus 113 l~~~~~~~~~--~~~~l~~L~~L~l~~n~l~~~~-~l~~~~~L~~L~l~~n~l~~l~-~l~~l~~L~~L~ls~N~i~~i~ 188 (199)
T d2omxa2 113 LFNNQITDID--PLKNLTNLNRLELSSNTISDIS-ALSGLTSLQQLNFSSNQVTDLK-PLANLTTLERLDISSNKVSDIS 188 (199)
T ss_dssp CCSSCCCCCG--GGTTCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCCCCG
T ss_pred cccccccccc--ccchhhhhHHhhhhhhhhcccc-cccccccccccccccccccCCc-cccCCCCCCEEECCCCCCCCCc
Confidence 9888776543 3677888999999998888764 4778889999999999888875 3788889999999999888775
Q ss_pred CccccCCccccEE
Q 014560 377 PELGLLEPSLQAL 389 (422)
Q Consensus 377 ~~~~~~~~~L~~l 389 (422)
.+..+ ++|++|
T Consensus 189 -~l~~L-~~L~~L 199 (199)
T d2omxa2 189 -VLAKL-TNLESL 199 (199)
T ss_dssp -GGGGC-TTCSEE
T ss_pred -cccCC-CCCCcC
Confidence 34544 777765
No 19
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.73 E-value=3.6e-17 Score=134.71 Aligned_cols=165 Identities=30% Similarity=0.409 Sum_probs=137.1
Q ss_pred CCCccEEeCCCCccccCCccccCCCCCcEEEecCCcCCCCChHHHhcCCCCCEEECCCCCCCcCCCCCCCCCCCccEEEc
Q 014560 218 AGEITKLDLSRNSIQELPPELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDL 297 (422)
Q Consensus 218 ~~~L~~L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l 297 (422)
+.+++.|+++++.++.++ .+..+++|++|++++|.++++++ +..+++|+.|++++|+++.++. +..+++|+.+++
T Consensus 45 L~~L~~L~l~~~~i~~l~-~l~~l~~L~~L~L~~n~i~~l~~--~~~l~~L~~L~l~~n~i~~l~~--l~~l~~L~~L~l 119 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSS--LKDLKKLKSLSL 119 (210)
T ss_dssp HHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGGG--GTTCTTCCEEEC
T ss_pred hcCccEEECcCCCCCCch-hHhhCCCCCEEeCCCccccCccc--cccCcccccccccccccccccc--cccccccccccc
Confidence 457889999999888775 37888999999999998888764 5778999999999998888764 788899999999
Q ss_pred cCCcCCCCCCCCCCCCccCceEEeCCCcCccCCcccccCCCCcEEECCCCCCcccCccCcCCCCCCEEeCCCCCCcccCC
Q 014560 298 SYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQSIPEGFKNLTSLTELDLSDNNISALPP 377 (422)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~l~l~~n~l~~l~~~~~~~~~L~~L~l~~n~l~~~~~ 377 (422)
.++.+... ..+..++.++.+++++|.++..+ .+..+++|+.+++++|.++.++. +.++++|+.|++++|.|+.++
T Consensus 120 ~~~~~~~~--~~l~~l~~l~~l~~~~n~l~~~~-~~~~l~~L~~l~l~~n~l~~i~~-l~~l~~L~~L~Ls~N~i~~l~- 194 (210)
T d1h6ta2 120 EHNGISDI--NGLVHLPQLESLYLGNNKITDIT-VLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDLR- 194 (210)
T ss_dssp TTSCCCCC--GGGGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBCG-
T ss_pred cccccccc--ccccccccccccccccccccccc-ccccccccccccccccccccccc-ccCCCCCCEEECCCCCCCCCh-
Confidence 98877654 34777889999999999888654 46678999999999999998764 788999999999999999886
Q ss_pred ccccCCccccEEEccC
Q 014560 378 ELGLLEPSLQALRLDG 393 (422)
Q Consensus 378 ~~~~~~~~L~~l~l~~ 393 (422)
.+..+ ++|++|++++
T Consensus 195 ~l~~l-~~L~~L~Ls~ 209 (210)
T d1h6ta2 195 ALAGL-KNLDVLELFS 209 (210)
T ss_dssp GGTTC-TTCSEEEEEE
T ss_pred hhcCC-CCCCEEEccC
Confidence 45555 8999999864
No 20
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=3.7e-17 Score=138.23 Aligned_cols=207 Identities=19% Similarity=0.261 Sum_probs=156.0
Q ss_pred cceeeccCCCCCCCCcccccCCCccEEeCCCCccccCCcc-ccCCCCCcEEEecCCcCCC-CChHHHhcCCCCCEEECCC
Q 014560 198 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-LSSCASLQTLILSRNKIKD-WPDAILTSLSSLSCLKLDN 275 (422)
Q Consensus 198 l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~-~~~~~~L~~L~l~~~~~~~-~~~~~~~~~~~L~~L~l~~ 275 (422)
.+.++..+.++..+|..+. +++++|++++|.++.++.. |.++++|+++++++|.+.. ++...|..+++++++.+..
T Consensus 10 ~~~i~c~~~~l~~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 10 NRVFLCQESKVTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SSEEEEESCSCSSCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CCEEEEeCCCCCCcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 3567777777888887664 5789999999999888764 8889999999999987765 5666678889999988764
Q ss_pred -CCCCcCCCCCCCCCCCccEEEccCCcCCCCCCC-CCCCCccCceEEeCCCcCccCCcc-cccC-CCCcEEECCCCCCcc
Q 014560 276 -NPLRQVPSDGFKDIPMLQILDLSYNIASLPENP-PFSSLPHLQELYLRRMQLREAPTD-ILRL-QQLRILDLSQNSLQS 351 (422)
Q Consensus 276 -~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~-~~~~~~~L~~L~l~~~~i~~l~~~-~~~~-~~L~~l~l~~n~l~~ 351 (422)
+.+...++..|..+++|+.+++.++.+...... .+..+..+..+...++.+..++.. +.++ ..+..+++++|.++.
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~ 167 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 167 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred cccccccccccccccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeecccccccc
Confidence 567777777788899999999999888755432 233445555556666677765433 4444 478888999999988
Q ss_pred cCccCcCCCCCCEEe-CCCCCCcccCCccccCCccccEEEccCCCCCccchHHHhh
Q 014560 352 IPEGFKNLTSLTELD-LSDNNISALPPELGLLEPSLQALRLDGNPLRSIRRTILDR 406 (422)
Q Consensus 352 l~~~~~~~~~L~~L~-l~~n~l~~~~~~~~~~~~~L~~l~l~~n~~~~i~~~~~~~ 406 (422)
++......+++..+. +++|.+++++...+..+++|++|++++|+++.++...|.+
T Consensus 168 i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~ 223 (242)
T d1xwdc1 168 IHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN 223 (242)
T ss_dssp ECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTT
T ss_pred cccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcC
Confidence 877655666666554 5677888888877666689999999999998888877765
No 21
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=4e-20 Score=172.22 Aligned_cols=353 Identities=21% Similarity=0.179 Sum_probs=197.1
Q ss_pred cccceecccccccCC--chhhhccccCCeEeccCCccc-----cCCCCCccCCCCCEEEcCCCcCcc-----CchhhhC-
Q 014560 24 MLTELIASKNLLNGM--PETIGSLSRLIRLDLHQNRIL-----SIPSSISGCCSLAEFYMGNNALSA-----LPAELGK- 90 (422)
Q Consensus 24 ~L~~L~l~~~~i~~~--~~~~~~~~~L~~L~l~~~~~~-----~l~~~~~~~~~L~~L~l~~~~i~~-----l~~~l~~- 90 (422)
+|++|+++++.++.. .+.+..++++++|++++|.++ .++.++..+++|++|++++|.++. +.+.+..
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 566777777777543 334556666777777776654 223334555666666666665541 1111211
Q ss_pred CCCCcEEEccCCcccccccccccceecEEEcCCCCCCCCCccccccCCccEEEcCCCccccccccccCCCChHHHHHHHc
Q 014560 91 LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 170 (422)
Q Consensus 91 ~~~L~~L~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~~~~ 170 (422)
..+|++|++++|.+++.... .++..+..+++|++|++++|.+.......+ ...+..
T Consensus 83 ~~~L~~L~L~~n~it~~~~~-----------------~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l-------~~~l~~ 138 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCG-----------------VLSSTLRTLPTLQELHLSDNLLGDAGLQLL-------CEGLLD 138 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHH-----------------HHHHHTTSCTTCCEEECCSSBCHHHHHHHH-------HHHHTS
T ss_pred CCCCCEEECCCCCccccccc-----------------cccchhhccccccccccccccchhhhhhhh-------hhcccc
Confidence 23455555555544321100 022345566777777777776643211100 001100
Q ss_pred cCCC---Cc--cccccchhhhHHHhhhccccccceeeccCCCCCC-----CCcccc-cCCCccEEeCCCCcccc-----C
Q 014560 171 RLPE---NE--DSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIW-EAGEITKLDLSRNSIQE-----L 234 (422)
Q Consensus 171 ~~~~---~~--~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~-----~~~~~~-~~~~L~~L~l~~~~l~~-----~ 234 (422)
.... .. .....................++.+.+..+.... ....+. .......+.+.++.+.. +
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~ 218 (460)
T d1z7xw1 139 PQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDL 218 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHH
T ss_pred cccccccccccccccchhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhcc
Confidence 0000 00 0001111111122222233455666665544331 111111 12356678888776543 2
Q ss_pred CccccCCCCCcEEEecCCcCCCC-----ChHHHhcCCCCCEEECCCCCCCcCCC----CCCCCCCCccEEEccCCcCCCC
Q 014560 235 PPELSSCASLQTLILSRNKIKDW-----PDAILTSLSSLSCLKLDNNPLRQVPS----DGFKDIPMLQILDLSYNIASLP 305 (422)
Q Consensus 235 ~~~~~~~~~L~~L~l~~~~~~~~-----~~~~~~~~~~L~~L~l~~~~~~~~~~----~~~~~~~~L~~l~l~~~~~~~~ 305 (422)
...+...+.++.+.+.++.+... ..........++.+++++|.+..... ..+...+.++.+++++|.++..
T Consensus 219 ~~~l~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~ 298 (460)
T d1z7xw1 219 CGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDE 298 (460)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHH
T ss_pred cccccccccccccchhhccccccccchhhccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 22345678899999998865432 12223446789999999987764221 1234578899999999877532
Q ss_pred CCC-----CCCCCccCceEEeCCCcCccC-----CcccccCCCCcEEECCCCCCcc-----cCccC-cCCCCCCEEeCCC
Q 014560 306 ENP-----PFSSLPHLQELYLRRMQLREA-----PTDILRLQQLRILDLSQNSLQS-----IPEGF-KNLTSLTELDLSD 369 (422)
Q Consensus 306 ~~~-----~~~~~~~L~~L~l~~~~i~~l-----~~~~~~~~~L~~l~l~~n~l~~-----l~~~~-~~~~~L~~L~l~~ 369 (422)
... .......|+.++++++.+... ...+..+++|++|++++|.++. +++.+ ...+.|++|++++
T Consensus 299 ~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~ 378 (460)
T d1z7xw1 299 GARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLAD 378 (460)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred ccchhhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCC
Confidence 111 112346899999999987732 2234567899999999999862 44444 3567899999999
Q ss_pred CCCcc-----cCCccccCCccccEEEccCCCCCccch
Q 014560 370 NNISA-----LPPELGLLEPSLQALRLDGNPLRSIRR 401 (422)
Q Consensus 370 n~l~~-----~~~~~~~~~~~L~~l~l~~n~~~~i~~ 401 (422)
|.|+. +...+..+ ++|++|++++|++++-..
T Consensus 379 n~i~~~~~~~l~~~l~~~-~~L~~L~Ls~N~i~~~g~ 414 (460)
T d1z7xw1 379 CDVSDSSCSSLAATLLAN-HSLRELDLSNNCLGDAGI 414 (460)
T ss_dssp SCCCHHHHHHHHHHHHHC-CCCCEEECCSSSCCHHHH
T ss_pred CCCChHHHHHHHHHHhcC-CCCCEEECCCCcCCHHHH
Confidence 99973 33445555 899999999999875433
No 22
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=2.1e-16 Score=133.48 Aligned_cols=198 Identities=19% Similarity=0.224 Sum_probs=156.6
Q ss_pred cccceeeccCCCCCCCCcc-cccCCCccEEeCCCCcccc-CCc-cccCCCCCcEEEecC-CcCCCCChHHHhcCCCCCEE
Q 014560 196 VTSKELSLEGMNLSAIPSE-IWEAGEITKLDLSRNSIQE-LPP-ELSSCASLQTLILSR-NKIKDWPDAILTSLSSLSCL 271 (422)
Q Consensus 196 ~~l~~l~l~~~~~~~~~~~-~~~~~~L~~L~l~~~~l~~-~~~-~~~~~~~L~~L~l~~-~~~~~~~~~~~~~~~~L~~L 271 (422)
.+++.++++++.+..++.. +.++++|++|++++|.+.. ++. .|..++.++++.+.. +.+...++..|..+++|+.+
T Consensus 29 ~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l 108 (242)
T d1xwdc1 29 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 108 (242)
T ss_dssp SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEE
T ss_pred CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccccccccccccc
Confidence 4678999999999988775 5668999999999998876 433 488899999999875 47777777778899999999
Q ss_pred ECCCCCCCcCCCCC-CCCCCCccEEEccCCcCCCCCCCCCCCCc-cCceEEeCCCcCccCCcccccCCCCcEE-ECCCCC
Q 014560 272 KLDNNPLRQVPSDG-FKDIPMLQILDLSYNIASLPENPPFSSLP-HLQELYLRRMQLREAPTDILRLQQLRIL-DLSQNS 348 (422)
Q Consensus 272 ~l~~~~~~~~~~~~-~~~~~~L~~l~l~~~~~~~~~~~~~~~~~-~L~~L~l~~~~i~~l~~~~~~~~~L~~l-~l~~n~ 348 (422)
+++++.+...+... +..++.+..+...++.+.......+..++ .++.+++.+|.++.++......+++..+ .+.+|.
T Consensus 109 ~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~l~~~~~l~~n~ 188 (242)
T d1xwdc1 109 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNN 188 (242)
T ss_dssp EEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTTTTCCEEEEECTTCTT
T ss_pred ccchhhhcccccccccccccccccccccccccccccccccccccccceeeecccccccccccccccchhhhccccccccc
Confidence 99999887765432 33455666666677777776666676665 7889999999999888777777777666 467788
Q ss_pred CcccCcc-CcCCCCCCEEeCCCCCCcccCCccccCCccccEEEccC
Q 014560 349 LQSIPEG-FKNLTSLTELDLSDNNISALPPELGLLEPSLQALRLDG 393 (422)
Q Consensus 349 l~~l~~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~l~l~~ 393 (422)
++.+|.. |.++++|+.|++++|+|+++|...+..++.|+.+++.+
T Consensus 189 l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 189 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp CCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEES
T ss_pred cccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcCCC
Confidence 9999764 89999999999999999999887665556777666654
No 23
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.68 E-value=4.2e-17 Score=132.31 Aligned_cols=125 Identities=24% Similarity=0.350 Sum_probs=57.8
Q ss_pred EeCCCCccccCCccccCCCCCcEEEecCCcCCC-CChHHHhcCCCCCEEECCCCCCCcCCCCCCCCCCCccEEEccCCcC
Q 014560 224 LDLSRNSIQELPPELSSCASLQTLILSRNKIKD-WPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302 (422)
Q Consensus 224 L~l~~~~l~~~~~~~~~~~~L~~L~l~~~~~~~-~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~ 302 (422)
++.++++++.+|..+. +++++|++++|.+.. .+...|..+++|+.|++++|.+..+++..|..+++|+.|++++|++
T Consensus 13 v~Cs~~~L~~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l 90 (192)
T d1w8aa_ 13 VDCTGRGLKEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKI 90 (192)
T ss_dssp EECTTSCCSSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCC
T ss_pred EEEeCCCcCccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccc
Confidence 3444444444443321 344444444444432 3333344444444444444444444444444444444555544444
Q ss_pred CCCCCCCCCCCccCceEEeCCCcCccCCcc-cccCCCCcEEECCCCCCc
Q 014560 303 SLPENPPFSSLPHLQELYLRRMQLREAPTD-ILRLQQLRILDLSQNSLQ 350 (422)
Q Consensus 303 ~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~-~~~~~~L~~l~l~~n~l~ 350 (422)
..+.+..|..+++|++|++++|.++.++.. +.++++|+++++++|.+.
T Consensus 91 ~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 91 KEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred cccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccc
Confidence 444444444455555555555555544332 344555555555555444
No 24
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.65 E-value=2.2e-16 Score=127.97 Aligned_cols=172 Identities=20% Similarity=0.218 Sum_probs=136.4
Q ss_pred ccceeeccCCCCCCCCcccccCCCccEEeCCCCcccc-CC-ccccCCCCCcEEEecCCcCCCCChHHHhcCCCCCEEECC
Q 014560 197 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE-LP-PELSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLD 274 (422)
Q Consensus 197 ~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~-~~-~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~ 274 (422)
..+.++.+++.+..+|..+. +++++|++++|.++. ++ ..|.++++|++|++++|.+..++...+..+++|+.|+++
T Consensus 9 ~~~~v~Cs~~~L~~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls 86 (192)
T d1w8aa_ 9 EGTTVDCTGRGLKEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp ETTEEECTTSCCSSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cCCEEEEeCCCcCccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeec
Confidence 45678899999999998764 689999999999976 43 447899999999999999999998889999999999999
Q ss_pred CCCCCcCCCCCCCCCCCccEEEccCCcCCCCCCCCCCCCccCceEEeCCCcCccCCcccccCCCCcEEECCCCCCc-ccC
Q 014560 275 NNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQELYLRRMQLREAPTDILRLQQLRILDLSQNSLQ-SIP 353 (422)
Q Consensus 275 ~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~l~~~~~~~~~L~~l~l~~n~l~-~l~ 353 (422)
+|++..+++..|.++++|+.|++++|.++.+.+..|..+++|+++++++|.+.......+-...++...+..+.++ ..|
T Consensus 87 ~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~~~~~l~~~~l~~~~~~c~~p 166 (192)
T d1w8aa_ 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred cccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHHHhhhhhhhcccCCCeEeCCC
Confidence 9999999999999999999999999999999999999999999999999988744332221123444455555554 234
Q ss_pred ccCcCCCCCCEEeCCCCCCc
Q 014560 354 EGFKNLTSLTELDLSDNNIS 373 (422)
Q Consensus 354 ~~~~~~~~L~~L~l~~n~l~ 373 (422)
..+ .+++.++++.+.++
T Consensus 167 ~~l---~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 167 SKV---RDVQIKDLPHSEFK 183 (192)
T ss_dssp TTT---TTSBGGGSCTTTCC
T ss_pred hhh---cCCEeeecCHhhCc
Confidence 332 34555566665554
No 25
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.64 E-value=6.4e-16 Score=114.95 Aligned_cols=104 Identities=25% Similarity=0.311 Sum_probs=92.0
Q ss_pred ceeeccCCcceecChhHHhhcccccceecccccccCCchhhhccccCCeEeccCCccccCCCCCccCCCCCEEEcCCCcC
Q 014560 2 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 81 (422)
Q Consensus 2 ~~L~ls~~~i~~i~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~i 81 (422)
|+|++++|+|+.++. +.++++|++|++++|.++.+|+.+..+++|++|++++|.++.+| .+..+++|+++++++|.+
T Consensus 1 R~L~Ls~n~l~~l~~--l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~l~~N~i 77 (124)
T d1dcea3 1 RVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNRL 77 (124)
T ss_dssp SEEECTTSCCSSCCC--GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSCC
T ss_pred CEEEcCCCCCCCCcc--cccCCCCCEEECCCCccCcchhhhhhhhcccccccccccccccC-ccccccccCeEECCCCcc
Confidence 689999999998875 89999999999999999999888999999999999999999886 488999999999999999
Q ss_pred ccCc--hhhhCCCCCcEEEccCCcccccc
Q 014560 82 SALP--AELGKLSKLGTLDLHSNQLKEYC 108 (422)
Q Consensus 82 ~~l~--~~l~~~~~L~~L~l~~~~~~~l~ 108 (422)
+.++ ..+..+++|++|++++|.++..+
T Consensus 78 ~~~~~~~~l~~~~~L~~L~l~~N~i~~~~ 106 (124)
T d1dcea3 78 QQSAAIQPLVSCPRLVLLNLQGNSLCQEE 106 (124)
T ss_dssp CSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred CCCCCchhhcCCCCCCEEECCCCcCCcCc
Confidence 8775 45888999999999999887543
No 26
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=4.5e-15 Score=116.00 Aligned_cols=125 Identities=21% Similarity=0.268 Sum_probs=73.3
Q ss_pred ccCCCCCcEEEecCCcCCCCChHHHhcCCCCCEEECCCCCCCcCCCCCCCCCCCccEEEccCCcCCCCCCCCCCCCccCc
Q 014560 238 LSSCASLQTLILSRNKIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIASLPENPPFSSLPHLQ 317 (422)
Q Consensus 238 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~ 317 (422)
+.++.++++|++++|.++.++. .+..+++|+.|++++|.+..++. + ..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i~~-~~~~l~~L~~L~Ls~N~i~~l~~--~------------------------~~l~~L~ 66 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKLDG--F------------------------PLLRRLK 66 (162)
T ss_dssp EECTTSCEEEECTTSCCCSCCC-GGGGTTCCSEEECCSSCCCEECC--C------------------------CCCSSCC
T ss_pred ccCcCcCcEEECCCCCCCccCc-cccccccCCEEECCCCCCCccCC--c------------------------ccCcchh
Confidence 4455566666666666666542 23455666666666665555422 3 3445555
Q ss_pred eEEeCCCcCccCCcc-cccCCCCcEEECCCCCCcccCc--cCcCCCCCCEEeCCCCCCcccCC----ccccCCccccEEE
Q 014560 318 ELYLRRMQLREAPTD-ILRLQQLRILDLSQNSLQSIPE--GFKNLTSLTELDLSDNNISALPP----ELGLLEPSLQALR 390 (422)
Q Consensus 318 ~L~l~~~~i~~l~~~-~~~~~~L~~l~l~~n~l~~l~~--~~~~~~~L~~L~l~~n~l~~~~~----~~~~~~~~L~~l~ 390 (422)
+|++++|.++.++.. +..+++|+.|++++|.++.+++ .+..+++|+.|++++|.++..+. .+..+ |+|++||
T Consensus 67 ~L~ls~N~i~~l~~~~~~~l~~L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~l-p~L~~LD 145 (162)
T d1a9na_ 67 TLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKV-PQVRVLD 145 (162)
T ss_dssp EEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHC-TTCSEET
T ss_pred hhhcccccccCCCccccccccccccceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHC-CCcCeeC
Confidence 555555555555444 3356677777777777665543 46667777777777777766654 23333 7777766
No 27
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=1.8e-15 Score=118.35 Aligned_cols=124 Identities=19% Similarity=0.137 Sum_probs=87.7
Q ss_pred HhhcccccceecccccccCCchhhhccccCCeEeccCCccccCCCCCccCCCCCEEEcCCCcCccCchh-hhCCCCCcEE
Q 014560 19 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTL 97 (422)
Q Consensus 19 ~~~~~~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~i~~l~~~-l~~~~~L~~L 97 (422)
|.+...++.|++++|.|+.++..+..+++|++|++++|.++.++ .+..+++|++|++++|.++.++.. +..+++|++|
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L 92 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 92 (162)
T ss_dssp EECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred ccCcCcCcEEECCCCCCCccCccccccccCCEEECCCCCCCccC-CcccCcchhhhhcccccccCCCccccccccccccc
Confidence 56667788888888888887766677788888888888888773 477788888888888888877544 4567888888
Q ss_pred EccCCcccccccc--cccc-eecEEEcCCCCCCCCCc----cccccCCccEEE
Q 014560 98 DLHSNQLKEYCVE--ACQL-RLSVLDLSNNSLSGLPP----EIGKMTTLRKLL 143 (422)
Q Consensus 98 ~l~~~~~~~l~~~--~~~~-~L~~L~l~~~~~~~~~~----~~~~l~~L~~L~ 143 (422)
++++|.+++++.. +... .|+.+++++|.++..+. .+..+++|+.||
T Consensus 93 ~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 93 ILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp ECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred eeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence 8888877765532 2222 27777777776655443 356667777664
No 28
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=3.7e-14 Score=122.12 Aligned_cols=218 Identities=22% Similarity=0.249 Sum_probs=126.2
Q ss_pred ceeeccCCcce-ecChhHHhhcccccceecccccccCCchhhhccccCCeEeccCCccc--cCCCCCccCCCCCEEEcCC
Q 014560 2 SKLDVEGNKLT-VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL--SIPSSISGCCSLAEFYMGN 78 (422)
Q Consensus 2 ~~L~ls~~~i~-~i~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~~~--~l~~~~~~~~~L~~L~l~~ 78 (422)
+.||++++.+. ++....+. ..+..+.++...+...........+|++|++++|.+. .+...+.++++|++|++++
T Consensus 3 ~~lDLs~~~l~~~~l~~l~~--~~~~~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~ 80 (284)
T d2astb2 3 QTLDLTGKNLHPDVTGRLLS--QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG 80 (284)
T ss_dssp SEEECTTCBCCHHHHHHHHH--TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTT
T ss_pred CEEECCCCCCCchHHHHHHh--ccceEeeccccccccchhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccc
Confidence 57899988875 22222222 2345566665555433333345578999999998776 3445578899999999999
Q ss_pred CcCc-cCchhhhCCCCCcEEEccCC-cccc--ccccccc-ceecEEEcCCCC-CCC--CCccccc-cCCccEEEcCCCcc
Q 014560 79 NALS-ALPAELGKLSKLGTLDLHSN-QLKE--YCVEACQ-LRLSVLDLSNNS-LSG--LPPEIGK-MTTLRKLLLTGNPL 149 (422)
Q Consensus 79 ~~i~-~l~~~l~~~~~L~~L~l~~~-~~~~--l~~~~~~-~~L~~L~l~~~~-~~~--~~~~~~~-l~~L~~L~l~~~~~ 149 (422)
+.++ ..+..+..+++|++|++++| .+++ +...... .+|++|++++|. ++. +...+.. ++.|+.|+++++..
T Consensus 81 ~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 160 (284)
T d2astb2 81 LRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK 160 (284)
T ss_dssp CBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGG
T ss_pred cCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhccccc
Confidence 9887 45677888999999999885 4442 1111111 236677766653 322 1122222 35666666655421
Q ss_pred ccccccccCCCChHHHHHHHccCCCCccccccchhhhHHHhhhccccccceeeccCCCCCCCCcccccCCCccEEeCCCC
Q 014560 150 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 229 (422)
Q Consensus 150 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~ 229 (422)
. +. +. .+......+++|++|++++|
T Consensus 161 ~-i~-------------------------------~~-----------------------~l~~l~~~~~~L~~L~L~~~ 185 (284)
T d2astb2 161 N-LQ-------------------------------KS-----------------------DLSTLVRRCPNLVHLDLSDS 185 (284)
T ss_dssp G-SC-------------------------------HH-----------------------HHHHHHHHCTTCSEEECTTC
T ss_pred c-cc-------------------------------cc-----------------------cccccccccccccccccccc
Confidence 0 00 00 01111223456777777665
Q ss_pred c-ccc-CCccccCCCCCcEEEecCC-cCCCCChHHHhcCCCCCEEECCCC
Q 014560 230 S-IQE-LPPELSSCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLDNN 276 (422)
Q Consensus 230 ~-l~~-~~~~~~~~~~L~~L~l~~~-~~~~~~~~~~~~~~~L~~L~l~~~ 276 (422)
. +++ ....+.++++|++|++++| .+++.....+..+++|+.|+++++
T Consensus 186 ~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 186 VMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp TTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred cCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 3 442 3334566677777777775 454444344566677777777665
No 29
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.53 E-value=4.9e-14 Score=104.56 Aligned_cols=105 Identities=24% Similarity=0.293 Sum_probs=72.2
Q ss_pred cceecccccccCCchhhhccccCCeEeccCCccccCCCCCccCCCCCEEEcCCCcCccCchhhhCCCCCcEEEccCCccc
Q 014560 26 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 105 (422)
Q Consensus 26 ~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~i~~l~~~l~~~~~L~~L~l~~~~~~ 105 (422)
|+|++++|.++.++ .+..+++|++|++++|.++.+|+.+..+++|++|++++|.++.+|. +..+++|++|++++|.+.
T Consensus 1 R~L~Ls~n~l~~l~-~l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~~-~~~l~~L~~L~l~~N~i~ 78 (124)
T d1dcea3 1 RVLHLAHKDLTVLC-HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDG-VANLPRLQELLLCNNRLQ 78 (124)
T ss_dssp SEEECTTSCCSSCC-CGGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCC
T ss_pred CEEEcCCCCCCCCc-ccccCCCCCEEECCCCccCcchhhhhhhhcccccccccccccccCc-cccccccCeEECCCCccC
Confidence 56777777777665 3667777777777777777777667777777777777777777753 677777777777776665
Q ss_pred ccccccccceecEEEcCCCCCCCCCccccccCCccEEEcCCCccccc
Q 014560 106 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 152 (422)
Q Consensus 106 ~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~ 152 (422)
.++. ...+..+++|+.+++++|+++..
T Consensus 79 ~~~~--------------------~~~l~~~~~L~~L~l~~N~i~~~ 105 (124)
T d1dcea3 79 QSAA--------------------IQPLVSCPRLVLLNLQGNSLCQE 105 (124)
T ss_dssp SSST--------------------TGGGGGCTTCCEEECTTSGGGGS
T ss_pred CCCC--------------------chhhcCCCCCCEEECCCCcCCcC
Confidence 4432 12456667777777777776543
No 30
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=1e-13 Score=119.31 Aligned_cols=216 Identities=21% Similarity=0.203 Sum_probs=140.5
Q ss_pred cceecccccccCCchhhhcc--ccCCeEeccCCccccCCCCCccCCCCCEEEcCCCcCc--cCchhhhCCCCCcEEEccC
Q 014560 26 TELIASKNLLNGMPETIGSL--SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS--ALPAELGKLSKLGTLDLHS 101 (422)
Q Consensus 26 ~~L~l~~~~i~~~~~~~~~~--~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~i~--~l~~~l~~~~~L~~L~l~~ 101 (422)
++++++++.+. |+.+... ..+..+.++...+............|++|+++++.++ .++..+.++++|++|++++
T Consensus 3 ~~lDLs~~~l~--~~~l~~l~~~~~~~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~ 80 (284)
T d2astb2 3 QTLDLTGKNLH--PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG 80 (284)
T ss_dssp SEEECTTCBCC--HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTT
T ss_pred CEEECCCCCCC--chHHHHHHhccceEeeccccccccchhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccc
Confidence 46788877663 2222211 2455666666655433333445678999999999876 4566688899999999999
Q ss_pred Ccccc-ccccccc-ceecEEEcCCC-CCCC--CCccccccCCccEEEcCCCc-cccccccccCCCChHHHHHHHccCCCC
Q 014560 102 NQLKE-YCVEACQ-LRLSVLDLSNN-SLSG--LPPEIGKMTTLRKLLLTGNP-LRTLRSSLVNGPTPALLKYLRSRLPEN 175 (422)
Q Consensus 102 ~~~~~-l~~~~~~-~~L~~L~l~~~-~~~~--~~~~~~~l~~L~~L~l~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (422)
+.+.+ ....+.. .+|+.|++++| .+++ +...+..+++|++|+++++. ++..
T Consensus 81 ~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~----------------------- 137 (284)
T d2astb2 81 LRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK----------------------- 137 (284)
T ss_dssp CBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH-----------------------
T ss_pred cCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccc-----------------------
Confidence 98763 2222223 23888888876 3443 22224567888888887753 2110
Q ss_pred ccccccchhhhHHHhhhccccccceeeccCCCCCCCCcccc-cCCCccEEeCCCCc--ccc--CCccccCCCCCcEEEec
Q 014560 176 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNS--IQE--LPPELSSCASLQTLILS 250 (422)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~-~~~~L~~L~l~~~~--l~~--~~~~~~~~~~L~~L~l~ 250 (422)
.+...+. ..++|+.|+++++. ++. +...+..+++|++|+++
T Consensus 138 ----------------------------------~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~ 183 (284)
T d2astb2 138 ----------------------------------HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLS 183 (284)
T ss_dssp ----------------------------------HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECT
T ss_pred ----------------------------------cchhhhcccccccchhhhcccccccccccccccccccccccccccc
Confidence 0000111 13578888888763 332 33334678999999999
Q ss_pred CC-cCCCCChHHHhcCCCCCEEECCCC-CCCcCCCCCCCCCCCccEEEccCC
Q 014560 251 RN-KIKDWPDAILTSLSSLSCLKLDNN-PLRQVPSDGFKDIPMLQILDLSYN 300 (422)
Q Consensus 251 ~~-~~~~~~~~~~~~~~~L~~L~l~~~-~~~~~~~~~~~~~~~L~~l~l~~~ 300 (422)
+| .+++.....+..+++|++|++++| .++......+..+++|+.|++.++
T Consensus 184 ~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 184 DSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp TCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred cccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 87 466655566788999999999996 455544445778999999999987
No 31
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.44 E-value=3.1e-14 Score=126.58 Aligned_cols=234 Identities=21% Similarity=0.205 Sum_probs=150.6
Q ss_pred HHhhcccccceecccccccC-----CchhhhccccCCeEeccCCccccC-----------CCCCccCCCCCEEEcCCCcC
Q 014560 18 LIASWTMLTELIASKNLLNG-----MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCSLAEFYMGNNAL 81 (422)
Q Consensus 18 ~~~~~~~L~~L~l~~~~i~~-----~~~~~~~~~~L~~L~l~~~~~~~l-----------~~~~~~~~~L~~L~l~~~~i 81 (422)
++.+...|+.|++++|.++. +...+..+++|+.++++++..... ...+..+++|++|++++|.+
T Consensus 26 ~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i 105 (344)
T d2ca6a1 26 VLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAF 105 (344)
T ss_dssp HHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCC
T ss_pred HHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccccc
Confidence 37788999999999998853 345567789999999998754422 23356788999999999987
Q ss_pred cc-----CchhhhCCCCCcEEEccCCccccc-----ccc----------cccceecEEEcCCCCCCC-----CCcccccc
Q 014560 82 SA-----LPAELGKLSKLGTLDLHSNQLKEY-----CVE----------ACQLRLSVLDLSNNSLSG-----LPPEIGKM 136 (422)
Q Consensus 82 ~~-----l~~~l~~~~~L~~L~l~~~~~~~l-----~~~----------~~~~~L~~L~l~~~~~~~-----~~~~~~~l 136 (422)
+. +...+..+++|++|++++|.+... ... .....++.+.++++.+.. +...+..+
T Consensus 106 ~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~ 185 (344)
T d2ca6a1 106 GPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSH 185 (344)
T ss_dssp CTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHC
T ss_pred ccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhh
Confidence 63 455567789999999999976521 111 112248899999988765 33446678
Q ss_pred CCccEEEcCCCccccccccccCCCChHHHHHHHccCCCCccccccchhhhHHHhhhccccccceeeccCCCCCCCCcccc
Q 014560 137 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 216 (422)
Q Consensus 137 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~ 216 (422)
+.++.+++++|.+...... ... ...+.
T Consensus 186 ~~L~~L~L~~n~i~~~g~~------------------------------~~l-----------------------~~~l~ 212 (344)
T d2ca6a1 186 RLLHTVKMVQNGIRPEGIE------------------------------HLL-----------------------LEGLA 212 (344)
T ss_dssp TTCCEEECCSSCCCHHHHH------------------------------HHH-----------------------HTTGG
T ss_pred hhhcccccccccccccccc------------------------------cch-----------------------hhhhc
Confidence 9999999999877431100 000 01223
Q ss_pred cCCCccEEeCCCCcccc-----CCccccCCCCCcEEEecCCcCCCCChHHH----hc--CCCCCEEECCCCCCCcCCC--
Q 014560 217 EAGEITKLDLSRNSIQE-----LPPELSSCASLQTLILSRNKIKDWPDAIL----TS--LSSLSCLKLDNNPLRQVPS-- 283 (422)
Q Consensus 217 ~~~~L~~L~l~~~~l~~-----~~~~~~~~~~L~~L~l~~~~~~~~~~~~~----~~--~~~L~~L~l~~~~~~~~~~-- 283 (422)
..++|+.|++++|.++. +...+..+++|++|++++|.+.+.....+ .. .++|++|++++|.++....
T Consensus 213 ~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~ 292 (344)
T d2ca6a1 213 YCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRT 292 (344)
T ss_dssp GCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHH
T ss_pred chhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHH
Confidence 34566777777766543 33345566777777777776665322222 22 3467777777776653111
Q ss_pred --CCC-CCCCCccEEEccCCcCCC
Q 014560 284 --DGF-KDIPMLQILDLSYNIASL 304 (422)
Q Consensus 284 --~~~-~~~~~L~~l~l~~~~~~~ 304 (422)
..+ .++++|+.+++++|.+..
T Consensus 293 l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 293 LKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp HHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHHHHHccCCCCCEEECCCCcCCC
Confidence 111 135677777777776653
No 32
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.42 E-value=3e-14 Score=126.62 Aligned_cols=240 Identities=21% Similarity=0.182 Sum_probs=156.2
Q ss_pred cCCchhhhccccCCeEeccCCccc-----cCCCCCccCCCCCEEEcCCCcCcc-----------CchhhhCCCCCcEEEc
Q 014560 36 NGMPETIGSLSRLIRLDLHQNRIL-----SIPSSISGCCSLAEFYMGNNALSA-----------LPAELGKLSKLGTLDL 99 (422)
Q Consensus 36 ~~~~~~~~~~~~L~~L~l~~~~~~-----~l~~~~~~~~~L~~L~l~~~~i~~-----------l~~~l~~~~~L~~L~l 99 (422)
..+..++.....|+.|++++|.+. .+...+...++|+.++++++.... +...+..+++|+.|++
T Consensus 21 ~~l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L 100 (344)
T d2ca6a1 21 KSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRL 100 (344)
T ss_dssp HTTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEEC
T ss_pred HHHHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccc
Confidence 345667788889999999998765 344557778899999998775432 2234566789999999
Q ss_pred cCCcccc-----ccccccc-ceecEEEcCCCCCCC-----CCcc---------ccccCCccEEEcCCCccccccccccCC
Q 014560 100 HSNQLKE-----YCVEACQ-LRLSVLDLSNNSLSG-----LPPE---------IGKMTTLRKLLLTGNPLRTLRSSLVNG 159 (422)
Q Consensus 100 ~~~~~~~-----l~~~~~~-~~L~~L~l~~~~~~~-----~~~~---------~~~l~~L~~L~l~~~~~~~~~~~~~~~ 159 (422)
++|.+.. +...... .+|+.|++++|.+.. +... ....+.|+.+.++++.+..-...
T Consensus 101 ~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~---- 176 (344)
T d2ca6a1 101 SDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMK---- 176 (344)
T ss_dssp CSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHH----
T ss_pred cccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccc----
Confidence 9887763 2222222 338999999887643 1111 13457888898888876421100
Q ss_pred CChHHHHHHHccCCCCccccccchhhhHHHhhhccccccceeeccCCCCCCCCcccccCCCccEEeCCCCcccc------
Q 014560 160 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE------ 233 (422)
Q Consensus 160 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~~~L~~L~l~~~~l~~------ 233 (422)
.+...+...+.+++|+++.|.+..
T Consensus 177 --------------------------------------------------~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~ 206 (344)
T d2ca6a1 177 --------------------------------------------------EWAKTFQSHRLLHTVKMVQNGIRPEGIEHL 206 (344)
T ss_dssp --------------------------------------------------HHHHHHHHCTTCCEEECCSSCCCHHHHHHH
T ss_pred --------------------------------------------------cccchhhhhhhhcccccccccccccccccc
Confidence 011122334567888888887653
Q ss_pred CCccccCCCCCcEEEecCCcCCCCC----hHHHhcCCCCCEEECCCCCCCcCCCCC----C--CCCCCccEEEccCCcCC
Q 014560 234 LPPELSSCASLQTLILSRNKIKDWP----DAILTSLSSLSCLKLDNNPLRQVPSDG----F--KDIPMLQILDLSYNIAS 303 (422)
Q Consensus 234 ~~~~~~~~~~L~~L~l~~~~~~~~~----~~~~~~~~~L~~L~l~~~~~~~~~~~~----~--~~~~~L~~l~l~~~~~~ 303 (422)
+...+..+++|+.|++++|.+.... ...+..+++|++|++++|.++...... + ...+.|+.|++++|.++
T Consensus 207 l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~ 286 (344)
T d2ca6a1 207 LLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIE 286 (344)
T ss_dssp HHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCB
T ss_pred hhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCC
Confidence 2334667888999999988765432 233567889999999999876422111 1 13467999999998776
Q ss_pred CCCCC----CC-CCCccCceEEeCCCcCccC
Q 014560 304 LPENP----PF-SSLPHLQELYLRRMQLREA 329 (422)
Q Consensus 304 ~~~~~----~~-~~~~~L~~L~l~~~~i~~l 329 (422)
..... .+ ..+++|+.|++++|.+...
T Consensus 287 ~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~ 317 (344)
T d2ca6a1 287 LDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 317 (344)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred hHHHHHHHHHHHccCCCCCEEECCCCcCCCc
Confidence 42211 12 2467899999999988754
No 33
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.36 E-value=6.9e-15 Score=119.14 Aligned_cols=127 Identities=25% Similarity=0.292 Sum_probs=83.8
Q ss_pred ccceecccc--cccCCchhhhccccCCeEeccCCccccCCCCCccCCCCCEEEcCCCcCccCchhhhCCCCCcEEEccCC
Q 014560 25 LTELIASKN--LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 102 (422)
Q Consensus 25 L~~L~l~~~--~i~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~i~~l~~~l~~~~~L~~L~l~~~ 102 (422)
++.+++++. .+..++.++..+++|++|++++|.|+.++ .+.++++|++|++++|.++.++.....+++|++|++++|
T Consensus 25 ~~~~~l~~~~~~i~~l~~sl~~L~~L~~L~Ls~n~I~~i~-~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N 103 (198)
T d1m9la_ 25 AEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYN 103 (198)
T ss_dssp CSCEECCBCCTTCCCCHHHHHHTTTCCEEECSEEEESCCC-CHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEE
T ss_pred cceeeeecccCchhhhhhHHhcccccceeECcccCCCCcc-cccCCccccChhhcccccccccccccccccccccccccc
Confidence 444455443 24455566777777777777777777764 467777777777777777777655555567777777777
Q ss_pred cccccccccccceecEEEcCCCCCCCCC--ccccccCCccEEEcCCCccccc
Q 014560 103 QLKEYCVEACQLRLSVLDLSNNSLSGLP--PEIGKMTTLRKLLLTGNPLRTL 152 (422)
Q Consensus 103 ~~~~l~~~~~~~~L~~L~l~~~~~~~~~--~~~~~l~~L~~L~l~~~~~~~~ 152 (422)
.++.++......+|+.|++++|+++.++ ..+..+++|+.|++++|++...
T Consensus 104 ~i~~l~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~ 155 (198)
T d1m9la_ 104 QIASLSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp ECCCHHHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHH
T ss_pred cccccccccccccccccccccchhccccccccccCCCccceeecCCCccccC
Confidence 7776654322333777777777777654 3467778888888888876544
No 34
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.30 E-value=7.9e-14 Score=112.79 Aligned_cols=138 Identities=21% Similarity=0.313 Sum_probs=109.7
Q ss_pred eeeccCC--cceecChhHHhhcccccceecccccccCCchhhhccccCCeEeccCCccccCCCCCccCCCCCEEEcCCCc
Q 014560 3 KLDVEGN--KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 80 (422)
Q Consensus 3 ~L~ls~~--~i~~i~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~l~~~~ 80 (422)
.+++++. .+..++.. +..+++|++|++++|.|+.++ .+..+++|++|++++|.++.+|..+..++.|++|++++|.
T Consensus 27 ~~~l~~~~~~i~~l~~s-l~~L~~L~~L~Ls~n~I~~i~-~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~ 104 (198)
T d1m9la_ 27 KVELHGMIPPIEKMDAT-LSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQ 104 (198)
T ss_dssp CEECCBCCTTCCCCHHH-HHHTTTCCEEECSEEEESCCC-CHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEEE
T ss_pred eeeeecccCchhhhhhH-HhcccccceeECcccCCCCcc-cccCCccccChhhccccccccccccccccccccccccccc
Confidence 4555543 24455544 999999999999999999886 5889999999999999999998766777889999999999
Q ss_pred CccCchhhhCCCCCcEEEccCCccccccc--ccccc-eecEEEcCCCCCCCCCc-----------cccccCCccEEE
Q 014560 81 LSALPAELGKLSKLGTLDLHSNQLKEYCV--EACQL-RLSVLDLSNNSLSGLPP-----------EIGKMTTLRKLL 143 (422)
Q Consensus 81 i~~l~~~l~~~~~L~~L~l~~~~~~~l~~--~~~~~-~L~~L~l~~~~~~~~~~-----------~~~~l~~L~~L~ 143 (422)
++.++ .+..+++|++|++++|.++.++. .+... +|+.|++++|.+...+. .+..+++|+.||
T Consensus 105 i~~l~-~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 105 IASLS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp CCCHH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred ccccc-cccccccccccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence 99884 48889999999999999987764 23334 49999999997654111 156678888874
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.26 E-value=5e-11 Score=91.92 Aligned_cols=106 Identities=28% Similarity=0.312 Sum_probs=84.0
Q ss_pred CCccEEEccCCcCCCCCCCCCCCCccCceEEeCCC-cCccCCc-ccccCCCCcEEECCCCCCccc-CccCcCCCCCCEEe
Q 014560 290 PMLQILDLSYNIASLPENPPFSSLPHLQELYLRRM-QLREAPT-DILRLQQLRILDLSQNSLQSI-PEGFKNLTSLTELD 366 (422)
Q Consensus 290 ~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~-~i~~l~~-~~~~~~~L~~l~l~~n~l~~l-~~~~~~~~~L~~L~ 366 (422)
...+.+++.++.+... +..+..+++|++|++.++ .++.++. +|.++++|+.|++++|+|+.+ +..|.++++|++|+
T Consensus 8 ~~~~~l~c~~~~~~~~-p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 86 (156)
T d2ifga3 8 HGSSGLRCTRDGALDS-LHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLN 86 (156)
T ss_dssp SSSSCEECCSSCCCTT-TTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEE
T ss_pred CCCCeEEecCCCCccC-cccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCccccccccccccccee
Confidence 3445566666555443 334666788888888766 5887764 477889999999999999988 55689999999999
Q ss_pred CCCCCCcccCCccccCCccccEEEccCCCCC
Q 014560 367 LSDNNISALPPELGLLEPSLQALRLDGNPLR 397 (422)
Q Consensus 367 l~~n~l~~~~~~~~~~~~~L~~l~l~~n~~~ 397 (422)
|++|+|++++...+.. .+++.|++++|++.
T Consensus 87 Ls~N~l~~l~~~~~~~-~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 87 LSFNALESLSWKTVQG-LSLQELVLSGNPLH 116 (156)
T ss_dssp CCSSCCSCCCSTTTCS-CCCCEEECCSSCCC
T ss_pred ccCCCCcccChhhhcc-ccccccccCCCccc
Confidence 9999999999998888 68999999999986
No 36
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.17 E-value=9.9e-11 Score=90.21 Aligned_cols=82 Identities=24% Similarity=0.306 Sum_probs=38.0
Q ss_pred EeCCCCccccCCccccCCCCCcEEEecCC-cCCCCChHHHhcCCCCCEEECCCCCCCcCCCCCCCCCCCccEEEccCCcC
Q 014560 224 LDLSRNSIQELPPELSSCASLQTLILSRN-KIKDWPDAILTSLSSLSCLKLDNNPLRQVPSDGFKDIPMLQILDLSYNIA 302 (422)
Q Consensus 224 L~l~~~~l~~~~~~~~~~~~L~~L~l~~~-~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~ 302 (422)
++.+++.+.+.|..+..+++|++|++.++ .++.++...|..+++|+.|++++|.+..+++.+|..+++|+.|++++|++
T Consensus 13 l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l 92 (156)
T d2ifga3 13 LRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNAL 92 (156)
T ss_dssp EECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCC
T ss_pred EEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCC
Confidence 44444444444444444445555555433 24444444444444555555554444444444444444444444444444
Q ss_pred CCC
Q 014560 303 SLP 305 (422)
Q Consensus 303 ~~~ 305 (422)
+..
T Consensus 93 ~~l 95 (156)
T d2ifga3 93 ESL 95 (156)
T ss_dssp SCC
T ss_pred ccc
Confidence 433
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.23 E-value=7.5e-08 Score=74.24 Aligned_cols=82 Identities=21% Similarity=0.207 Sum_probs=41.3
Q ss_pred cccceecccccccCCchhhhccccCCeEeccCCccccCC---CCCccCCCCCEEEcCCCcCccCch-hhhCCCCCcEEEc
Q 014560 24 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP---SSISGCCSLAEFYMGNNALSALPA-ELGKLSKLGTLDL 99 (422)
Q Consensus 24 ~L~~L~l~~~~i~~~~~~~~~~~~L~~L~l~~~~~~~l~---~~~~~~~~L~~L~l~~~~i~~l~~-~l~~~~~L~~L~l 99 (422)
.+..+...++....+...+..+++|++|++++|.++.++ ..+..+++|+.|++++|.++.++. .+....+|+.+++
T Consensus 43 ~~~~l~~~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L 122 (162)
T d1koha1 43 IDVVLNRRSSMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWL 122 (162)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCC
T ss_pred chhhcchhhhHhhhhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeec
Confidence 333333333333333333445566666666666655442 224455666666666666665533 2233345666666
Q ss_pred cCCccc
Q 014560 100 HSNQLK 105 (422)
Q Consensus 100 ~~~~~~ 105 (422)
++|.+.
T Consensus 123 ~~Npl~ 128 (162)
T d1koha1 123 DGNSLS 128 (162)
T ss_dssp TTSTTS
T ss_pred CCCCcC
Confidence 666554
No 38
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=98.21 E-value=5.1e-07 Score=69.80 Aligned_cols=85 Identities=14% Similarity=0.075 Sum_probs=46.7
Q ss_pred hcccccceecccc-cccC-----CchhhhccccCCeEeccCCccc-----cCCCCCccCCCCCEEEcCCCcCc-----cC
Q 014560 21 SWTMLTELIASKN-LLNG-----MPETIGSLSRLIRLDLHQNRIL-----SIPSSISGCCSLAEFYMGNNALS-----AL 84 (422)
Q Consensus 21 ~~~~L~~L~l~~~-~i~~-----~~~~~~~~~~L~~L~l~~~~~~-----~l~~~~~~~~~L~~L~l~~~~i~-----~l 84 (422)
+.+.|+.|+|+++ .++. +..++...++|++|++++|.+. .+.+.+...+.|++|++++|.++ .+
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l 92 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 92 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHH
Confidence 4466666666653 3431 2234455566666666666554 22233445566666666666665 23
Q ss_pred chhhhCCCCCcEEEccCCccc
Q 014560 85 PAELGKLSKLGTLDLHSNQLK 105 (422)
Q Consensus 85 ~~~l~~~~~L~~L~l~~~~~~ 105 (422)
...+...+.|++|+++++.+.
T Consensus 93 ~~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 93 LRSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp HHHTTTTCCCSEEECCCCSSC
T ss_pred HHHHHhCCcCCEEECCCCcCC
Confidence 344555666666666655433
No 39
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.13 E-value=9.3e-07 Score=67.89 Aligned_cols=83 Identities=24% Similarity=0.192 Sum_probs=66.4
Q ss_pred hhHHhhcccccceecccccccCCc---hhhhccccCCeEeccCCccccCCC-CCccCCCCCEEEcCCCcCccCc------
Q 014560 16 NNLIASWTMLTELIASKNLLNGMP---ETIGSLSRLIRLDLHQNRILSIPS-SISGCCSLAEFYMGNNALSALP------ 85 (422)
Q Consensus 16 ~~~~~~~~~L~~L~l~~~~i~~~~---~~~~~~~~L~~L~l~~~~~~~l~~-~~~~~~~L~~L~l~~~~i~~l~------ 85 (422)
..++.++++|++|++++|.++.++ ..+..+++|++|++++|.++.+++ .+....+|+++++.+|.+....
T Consensus 58 ~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y 137 (162)
T d1koha1 58 RIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTY 137 (162)
T ss_dssp HHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHH
T ss_pred HHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhH
Confidence 445678999999999999998763 457789999999999999998854 2334567999999999887432
Q ss_pred --hhhhCCCCCcEEE
Q 014560 86 --AELGKLSKLGTLD 98 (422)
Q Consensus 86 --~~l~~~~~L~~L~ 98 (422)
..+..+|+|++||
T Consensus 138 ~~~i~~~~P~L~~LD 152 (162)
T d1koha1 138 ISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHTTSTTCCEET
T ss_pred HHHHHHHCCCCCEEC
Confidence 2366789999997
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.97 E-value=3.5e-06 Score=64.93 Aligned_cols=109 Identities=16% Similarity=0.117 Sum_probs=79.8
Q ss_pred CCCCCccEEEccCC-cCCCCC----CCCCCCCccCceEEeCCCcCc-----cCCcccccCCCCcEEECCCCCCc-----c
Q 014560 287 KDIPMLQILDLSYN-IASLPE----NPPFSSLPHLQELYLRRMQLR-----EAPTDILRLQQLRILDLSQNSLQ-----S 351 (422)
Q Consensus 287 ~~~~~L~~l~l~~~-~~~~~~----~~~~~~~~~L~~L~l~~~~i~-----~l~~~~~~~~~L~~l~l~~n~l~-----~ 351 (422)
.+.+.|+.|+++++ .++... ...+...+.|++|++++|.+. .+...+...+.|+.|++++|.++ .
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 35689999999874 454321 223567789999999999887 23334556789999999999987 3
Q ss_pred cCccCcCCCCCCEEeCCCCCCccc--------CCccccCCccccEEEccCCCC
Q 014560 352 IPEGFKNLTSLTELDLSDNNISAL--------PPELGLLEPSLQALRLDGNPL 396 (422)
Q Consensus 352 l~~~~~~~~~L~~L~l~~n~l~~~--------~~~~~~~~~~L~~l~l~~n~~ 396 (422)
+..++...++|++|++++|.+..+ ...+... ++|+.|+++.+..
T Consensus 92 l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n-~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEEN-ESLLRVGISFASM 143 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHC-SSCCEEECCCCCH
T ss_pred HHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhC-CCccEeeCcCCCc
Confidence 456688899999999998865433 3334445 8999999987643
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.88 E-value=2.9e-06 Score=65.41 Aligned_cols=85 Identities=14% Similarity=0.117 Sum_probs=46.8
Q ss_pred hhHHhhcccccceeccc-ccccC-----CchhhhccccCCeEeccCCccc-----cCCCCCccCCCCCEEEcCCCcCc--
Q 014560 16 NNLIASWTMLTELIASK-NLLNG-----MPETIGSLSRLIRLDLHQNRIL-----SIPSSISGCCSLAEFYMGNNALS-- 82 (422)
Q Consensus 16 ~~~~~~~~~L~~L~l~~-~~i~~-----~~~~~~~~~~L~~L~l~~~~~~-----~l~~~~~~~~~L~~L~l~~~~i~-- 82 (422)
..+..+.+.|+.|++++ +.++. +..++..+++|++|++++|.+. .+...+...+.++.++++++.+.
T Consensus 10 ~~~~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~ 89 (166)
T d1io0a_ 10 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 89 (166)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccch
Confidence 33344556666666665 33431 2334455666666777666554 22233455666666666666654
Q ss_pred ---cCchhhhCCCCCcEEEcc
Q 014560 83 ---ALPAELGKLSKLGTLDLH 100 (422)
Q Consensus 83 ---~l~~~l~~~~~L~~L~l~ 100 (422)
.+...+...++|+.++++
T Consensus 90 g~~~l~~~l~~~~~L~~l~L~ 110 (166)
T d1io0a_ 90 GILALVEALQSNTSLIELRID 110 (166)
T ss_dssp HHHHHHHGGGGCSSCCEEECC
T ss_pred hHHHHHHHHHhCccccEEeec
Confidence 334445566666665543
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.80 E-value=3e-06 Score=65.33 Aligned_cols=108 Identities=18% Similarity=0.138 Sum_probs=71.4
Q ss_pred hhccccCCeEeccCC-ccc-----cCCCCCccCCCCCEEEcCCCcCc-----cCchhhhCCCCCcEEEccCCccc-----
Q 014560 42 IGSLSRLIRLDLHQN-RIL-----SIPSSISGCCSLAEFYMGNNALS-----ALPAELGKLSKLGTLDLHSNQLK----- 105 (422)
Q Consensus 42 ~~~~~~L~~L~l~~~-~~~-----~l~~~~~~~~~L~~L~l~~~~i~-----~l~~~l~~~~~L~~L~l~~~~~~----- 105 (422)
..+.++|++|+++++ .+. .+-.++..+++|++|++++|.++ .+.+.+...+.++.++++++.+.
T Consensus 13 ~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~ 92 (166)
T d1io0a_ 13 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 92 (166)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHH
Confidence 346688888888873 454 23344567788889999988876 34555677788888988888765
Q ss_pred ccccccccce-ecEEEcC--CCCCCC-----CCccccccCCccEEEcCCCcc
Q 014560 106 EYCVEACQLR-LSVLDLS--NNSLSG-----LPPEIGKMTTLRKLLLTGNPL 149 (422)
Q Consensus 106 ~l~~~~~~~~-L~~L~l~--~~~~~~-----~~~~~~~l~~L~~L~l~~~~~ 149 (422)
.+.......+ ++.+.+. ++.+.. +...+...+.|++|++..+..
T Consensus 93 ~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 93 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCC
Confidence 2333333333 7765554 444543 444566788888888876643
Done!