BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014569
(422 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XIA4|CCS1_ARATH Cytochrome c biogenesis protein CCS1, chloroplastic OS=Arabidopsis
thaliana GN=CCS1 PE=2 SV=1
Length = 547
Score = 580 bits (1496), Expect = e-165, Method: Compositional matrix adjust.
Identities = 290/415 (69%), Positives = 332/415 (80%), Gaps = 20/415 (4%)
Query: 15 ILKAPLLHSTFNPQLHTLFNRCITLSSTISCKLRTSQDVKKKKD---NVSKKIVFSDSSP 71
IL +H P + R ++L + +CKL+ QD ++ N++K I SDS+P
Sbjct: 9 ILHFSKIHPFSRPSSYLCRTRNVSLIT--NCKLQKPQDGNQRSSSNRNLTKTISLSDSAP 66
Query: 72 PSLKNDEVSGEVESKNGVIG------------LVKRLPRRVLAALSNLPLAIGEMAAIAA 119
P E +G+ K G G +K LPR+VL+ LSNLPLAI EM IAA
Sbjct: 67 PV---TEETGDGIVKGGGNGGGGGGDGRGGLGFLKILPRKVLSVLSNLPLAITEMFTIAA 123
Query: 120 LMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILTLGFDHMFSSPIFLGLLVMMGLS 179
LMALGT IEQGE PDFYFQKYPEDNPV GFFTWRWI TLG DHM+S+PIFLG+LV++ S
Sbjct: 124 LMALGTVIEQGETPDFYFQKYPEDNPVLGFFTWRWISTLGLDHMYSAPIFLGMLVLLAAS 183
Query: 180 LMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLPRASIQDLGVILMGAGYEVFLKG 239
LMACTYTTQIPLVKVARRWSF+ S EAI+KQEF+DTLPRASIQDLG+ILMG G+EVF+KG
Sbjct: 184 LMACTYTTQIPLVKVARRWSFMKSDEAIKKQEFADTLPRASIQDLGMILMGDGFEVFMKG 243
Query: 240 PSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFRGSVTVPQGLNFVVGDVLGPNGF 299
PSLYAFKGL GRFAPIGVH+AMLLIM GGTLSATGSFRGSVTVPQGLNFV+GDVL P GF
Sbjct: 244 PSLYAFKGLAGRFAPIGVHIAMLLIMVGGTLSATGSFRGSVTVPQGLNFVMGDVLAPIGF 303
Query: 300 LSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSLFDIGGKEVMRKTISVNDPLRYGGI 359
S PTDAF+TEVHVN+F MDYYDSGEV QFHSDLSL D+ GKEV+RKTISVNDPLRYGG+
Sbjct: 304 FSIPTDAFNTEVHVNRFTMDYYDSGEVSQFHSDLSLRDLNGKEVLRKTISVNDPLRYGGV 363
Query: 360 TIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKKLFGTFLPLGDVNSPNVKGI 414
T+YQTDWSFSALQV K+ EGPFNLAMAP+K+NGDKKL+GTFLP+GD N+PNVKGI
Sbjct: 364 TVYQTDWSFSALQVTKDGEGPFNLAMAPIKINGDKKLYGTFLPVGDTNAPNVKGI 418
>sp|Q75KA9|CCS1_ORYSJ Cytochrome c biogenesis protein CCS1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CCS1 PE=2 SV=1
Length = 564
Score = 530 bits (1366), Expect = e-150, Method: Compositional matrix adjust.
Identities = 265/366 (72%), Positives = 301/366 (82%), Gaps = 13/366 (3%)
Query: 62 KKIVFSDSSPPSLKNDEVSGEV-------------ESKNGVIGLVKRLPRRVLAALSNLP 108
K++VF D++PP + G +N +GLV+RL +R L+ LSNLP
Sbjct: 67 KQVVFFDAAPPVSQRGGGGGGEGEGEGEGEGKVARRKENAALGLVRRLTKRTLSLLSNLP 126
Query: 109 LAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILTLGFDHMFSSPI 168
LAI EM AIAALMALGT I+QGE P +YF+K+PEDNPVFGF TWRWILT GFDHMFSSP+
Sbjct: 127 LAISEMFAIAALMALGTVIDQGEAPSYYFEKFPEDNPVFGFITWRWILTPGFDHMFSSPV 186
Query: 169 FLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLPRASIQDLGVIL 228
FLGLL ++ SLMACTYTTQIP+VKVARRWSF+HSA +IRKQEF+++LPRASIQDLGVIL
Sbjct: 187 FLGLLALLAASLMACTYTTQIPIVKVARRWSFMHSAGSIRKQEFAESLPRASIQDLGVIL 246
Query: 229 MGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFRGSVTVPQGLNF 288
MG GYEVF KGPSLYAFKGL GRFAPIGVH+AM+ IMAG TLSATGSF+GSV VPQGLNF
Sbjct: 247 MGYGYEVFTKGPSLYAFKGLAGRFAPIGVHIAMIFIMAGATLSATGSFKGSVDVPQGLNF 306
Query: 289 VVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSLFDIGGKEVMRKTI 348
V+GDV+ P G LS D F+TEVHVN+FYM+YYDSGEV QF+SDLSLFD+ GKEVMRKTI
Sbjct: 307 VIGDVMKPKGVLSFVPDVFNTEVHVNRFYMEYYDSGEVSQFYSDLSLFDLDGKEVMRKTI 366
Query: 349 SVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKKLFGTFLPLGDVNS 408
VNDPLRYGG+TIYQTDW FSALQV KN EGPFNLAMAPLK+NGDKKLFGT LPL + S
Sbjct: 367 KVNDPLRYGGVTIYQTDWGFSALQVKKNGEGPFNLAMAPLKLNGDKKLFGTLLPLENSGS 426
Query: 409 PNVKGI 414
NVKGI
Sbjct: 427 SNVKGI 432
>sp|Q8GTZ9|CCS1_CHLRE Cytochrome c biogenesis protein CCS1, chloroplastic
OS=Chlamydomonas reinhardtii GN=CCS1 PE=1 SV=2
Length = 613
Score = 262 bits (669), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 153/362 (42%), Positives = 207/362 (57%), Gaps = 27/362 (7%)
Query: 43 ISCKLRTSQDVKKKKDNVSKKIVFSDSSP-------------PSLKNDEVSGEVESKNGV 89
+ C + Q KKK NV+ K+ ++ P PS +D S G
Sbjct: 36 VRCFAKGGQPGDKKKLNVTDKLRLGNTPPTLDVLKAPRPTDAPSAIDDAPSTSGLGLGGG 95
Query: 90 IGLVKRLP---------RRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKY 140
+ + L RR++ LS+LP AI MA IA L LGT I Q + ++Y Y
Sbjct: 96 VASPRTLVQSNAVQVAWRRLMKELSSLPRAIAIMALIAVLSGLGTFIPQNKSIEYYLVNY 155
Query: 141 PED-NPVFGFFTWRWILTLGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWS 199
P+ V GF T ILTL DH++++ F + ++ SL ACTYT Q P VKVA+RW
Sbjct: 156 PDGAEKVLGFLTGDLILTLQLDHIYTADYFYLSMGLLAASLAACTYTRQWPAVKVAQRWR 215
Query: 200 FLHSAEAIRKQEFSDTLPRASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHL 259
FL +++ KQ ++ LP A + DLG IL+ GY+VF+K SLY FKGL G+ PIGVH
Sbjct: 216 FLTQPKSLLKQGRTEVLPNARVSDLGAILLQRGYQVFVKDGSLYGFKGLAGKLGPIGVHA 275
Query: 260 AMLLIMAGGTLSATGSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMD 319
A+LL + G S G+ +G+V P+G +F V L P+ +++ + S +HVNKF +D
Sbjct: 276 ALLLCLFGTAWSGFGTLKGNVMCPEGQDFQVASFLQPSSPIASMPASASNVIHVNKFTID 335
Query: 320 YYDSGEVKQFHSDLSLFD--IGGKEVMRKTISVNDPLRYGGITIYQTDWSFSA--LQVLK 375
Y G V QF+SDLSL D GGKE+MRKTISVNDP R+ G+T+YQTDWS SA L+VL
Sbjct: 336 YRPDGSVAQFYSDLSLLDPAQGGKEMMRKTISVNDPFRFNGVTMYQTDWSLSAVTLRVLG 395
Query: 376 ND 377
D
Sbjct: 396 QD 397
>sp|Q2JXK6|CCS1_SYNJA Cytochrome c biogenesis protein CcsB OS=Synechococcus sp. (strain
JA-3-3Ab) GN=ccsB PE=3 SV=1
Length = 478
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/293 (44%), Positives = 177/293 (60%), Gaps = 5/293 (1%)
Query: 110 AIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILTLGFDHMFSSPIF 169
AIG AIA L A+GT IEQ E FY YPE +FGF TWR IL LG DH++ + F
Sbjct: 33 AIGLFLAIALLSAVGTVIEQEETVAFYQAHYPEHPALFGFLTWRLILKLGLDHVYRTSWF 92
Query: 170 LGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLPRASIQDLGVILM 229
L LL++ G SL AC+ T Q P++KVARRWS+L + ++ F LP+ S+Q L L
Sbjct: 93 LALLILFGSSLAACSLTRQWPMLKVARRWSYLTRPHSFQRLPFWTYLPQRSLQGLPQRLR 152
Query: 230 GAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFRGSVTVPQGLNFV 289
GY VF G LYA KGL+GRF PI VH+++LLI+ G + F+ +P G
Sbjct: 153 QRGYAVFQDGSRLYARKGLIGRFGPILVHVSLLLILLGAIWGSLAGFKAQALIPSGSVAA 212
Query: 290 VGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSLFDIGGKEVMRKTIS 349
+ V G PT ++ VN+F++DY G VKQF+SDLS+ D GG+EV R+TIS
Sbjct: 213 IEQVTGAGDLAHLPT----WQIRVNRFWIDYAPDGRVKQFYSDLSILD-GGQEVKRQTIS 267
Query: 350 VNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKKLFGTFLP 402
VN PL Y G+T+YQ DWS ++++ N+ PF + + P+ KL+G F+P
Sbjct: 268 VNHPLSYRGVTLYQADWSIDSIRIRLNNSPPFQIPVVPVPTQAGSKLWGAFVP 320
>sp|B1WRN9|CCS1_CYAA5 Cytochrome c biogenesis protein CcsB OS=Cyanothece sp. (strain ATCC
51142) GN=ccsB PE=3 SV=1
Length = 451
Score = 245 bits (626), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 181/305 (59%), Gaps = 1/305 (0%)
Query: 98 RRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILT 157
R+++ +++L LAI + AIA GT IEQGE FY Q YPED +FGF TW+ IL
Sbjct: 21 RQLIKIVADLRLAIVLLLAIALFSISGTVIEQGETISFYQQNYPEDPALFGFLTWKVILI 80
Query: 158 LGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLP 217
LG +H++++ FL LLV+ G SL CT+T Q P +K AR+W+F A K S L
Sbjct: 81 LGLNHVYTTWWFLSLLVLFGTSLTTCTFTRQFPALKAARKWNFYQKARQFEKLALSTELA 140
Query: 218 RASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFR 277
++ + +L GY+ F + ++YA KG++G+ PI VH AML+I+ G A F
Sbjct: 141 INDLKFVNNLLEQKGYKTFQENQAIYARKGIIGKIGPIVVHAAMLIILGGAIWGALTGFL 200
Query: 278 GSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSLFD 337
VP G F V +++ G LS P + VN+F++DY G + QF+SDLS+ +
Sbjct: 201 AQAMVPTGSEFKVNNII-EAGPLSQPQIPKDWGIRVNRFWIDYTPDGTIDQFYSDLSVIN 259
Query: 338 IGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKKLF 397
G+E+ KTI VN+PLRY G+T YQTDW + +Q N+ F L MA L NG+ +++
Sbjct: 260 NDGEELKHKTIYVNEPLRYHGVTFYQTDWGIAGVQAQVNNSPIFQLPMALLNTNGNGRIW 319
Query: 398 GTFLP 402
GT++P
Sbjct: 320 GTWIP 324
>sp|Q2JNP5|CCS1_SYNJB Cytochrome c biogenesis protein CcsB OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=ccsB PE=3 SV=1
Length = 469
Score = 245 bits (625), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 124/293 (42%), Positives = 176/293 (60%), Gaps = 3/293 (1%)
Query: 110 AIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILTLGFDHMFSSPIF 169
AIG + AIA L A GT IEQ E FY YPE +FGF TWR IL+LG DH++ +P F
Sbjct: 33 AIGLLLAIAVLSATGTVIEQEETAAFYQAHYPEHPALFGFLTWRVILSLGLDHVYRTPWF 92
Query: 170 LGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLPRASIQDLGVILM 229
L +L++ G SL AC+ T Q P++K ARRWS+L ++ ++ F LP+ S+Q L L
Sbjct: 93 LAILILFGSSLAACSLTRQWPMLKRARRWSYLTRPQSFQRLPFRTYLPQQSLQGLPQQLR 152
Query: 230 GAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFRGSVTVPQGLNFV 289
GY VF +G LYA KGL+GR PI VH++MLLI+ G + F+ +P G
Sbjct: 153 RQGYLVFQEGHYLYARKGLIGRIGPILVHVSMLLILLGAIWGSISGFKAQELIPSGGVAS 212
Query: 290 VGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSLFDIGGKEVMRKTIS 349
+ + G + ++ N+F++DY G VKQF+SDLS+ D G+EV R+TIS
Sbjct: 213 IQHLTGAGDLARAHLPTW--QIRANRFWIDYAADGRVKQFYSDLSILD-QGQEVKRQTIS 269
Query: 350 VNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKKLFGTFLP 402
VN PL Y G+T+YQ DWS ++++ N+ F + + P++ KL+G F+P
Sbjct: 270 VNHPLSYRGVTLYQADWSIDSIRIRINNSPTFQIPVVPVRTEAGNKLWGAFVP 322
>sp|O68616|CCS1_SYNP2 Cytochrome c biogenesis protein CcsB OS=Synechococcus sp. (strain
ATCC 27264 / PCC 7002 / PR-6) GN=ccsB PE=3 SV=1
Length = 462
Score = 239 bits (609), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 182/311 (58%), Gaps = 7/311 (2%)
Query: 97 PRRV----LAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTW 152
PR+V L +++L +AI + I+ LGT IEQG FY + YPED + GF +W
Sbjct: 16 PRKVWRTGLKWIADLRVAIALLLLISVFSILGTVIEQGSTIQFYQENYPEDPALLGFLSW 75
Query: 153 RWILTLGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEF 212
+ +L LG DH++++ +L LL+ G+SL+ACT+ Q+P +K AR W++ A K
Sbjct: 76 KVLLGLGLDHVYTTWWYLVLLLAFGVSLIACTFRRQLPALKTARNWNYYSQARQFNKLAL 135
Query: 213 SDTLPRASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSA 272
S L S+Q L L Y++F G LYA KG+VGR PI VH+ M++ + G A
Sbjct: 136 STELDHGSLQSLKPQLEKKRYKIFQDGEKLYARKGIVGRIGPIIVHIGMIVTLVGSIWGA 195
Query: 273 TGSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSD 332
G F +P G+NF V +V G S +S V+VN+F++DY +G++ QF+SD
Sbjct: 196 FGGFMAQEMIPSGVNFKVNNVF-KAGIFSESDRPWS--VNVNRFWIDYTPTGDIDQFYSD 252
Query: 333 LSLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNG 392
LS+ D G+E+ RKTISVN PLRY GIT YQT WS +QV N+ F L A +
Sbjct: 253 LSVVDGEGQELERKTISVNHPLRYDGITFYQTSWSIGGVQVQLNNSPIFQLPAAQIPTEN 312
Query: 393 DKKLFGTFLPL 403
KL+G+++P+
Sbjct: 313 GAKLWGSWVPI 323
>sp|Q118K5|CCS1_TRIEI Cytochrome c biogenesis protein CcsB OS=Trichodesmium erythraeum
(strain IMS101) GN=ccsB PE=3 SV=1
Length = 472
Score = 233 bits (594), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/322 (40%), Positives = 187/322 (58%), Gaps = 1/322 (0%)
Query: 82 EVESKNGVIGLVKRLPRRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYP 141
E KN +I ++ R +L L++L LAI + IA GT IEQGE FY + YP
Sbjct: 4 EDSDKNSLINPLRIFKREILPLLADLRLAIALLLIIAICSISGTVIEQGESIAFYQENYP 63
Query: 142 EDNPVFGFFTWRWILTLGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFL 201
E +FGF TW+ IL L DH++ + FL +L++ G SL ACT+T Q+P +K A RW F
Sbjct: 64 EKPALFGFLTWKVILLLELDHVYRTWWFLSILILFGASLTACTFTRQLPALKSANRWKFY 123
Query: 202 HSAEAIRKQEFSDTLPRASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAM 261
+ + + S + AS+ L IL GY+ +G LY KG++G+ PI VH +M
Sbjct: 124 NKKQQFKNLALSAEIETASLDSLEEILQKRGYKTSKEGDKLYGRKGIIGKVGPIIVHASM 183
Query: 262 LLIMAGGTLSATGSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYY 321
L+I+AG + + F G VP G F V +++ G + + V VN+F++DY
Sbjct: 184 LIILAGSIIGSMTGFLGQEIVPSGETFQVKNIIDA-GIFAKSQIPKNWSVRVNRFWIDYT 242
Query: 322 DSGEVKQFHSDLSLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPF 381
SG + QF+SDLS+ D G+EV RKTI VN P+RY G+T+YQ DW+ +A++V N F
Sbjct: 243 PSGGIDQFYSDLSILDKSGEEVDRKTIFVNQPMRYHGVTMYQADWAIAAVKVRVNKSPVF 302
Query: 382 NLAMAPLKVNGDKKLFGTFLPL 403
L MA L G K++GT++P+
Sbjct: 303 RLPMAQLNTEGGGKIWGTWVPI 324
>sp|Q8DL16|CCS1_THEEB Cytochrome c biogenesis protein CcsB OS=Thermosynechococcus
elongatus (strain BP-1) GN=ccsB PE=3 SV=1
Length = 442
Score = 231 bits (590), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 133/305 (43%), Positives = 176/305 (57%), Gaps = 3/305 (0%)
Query: 98 RRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILT 157
RRVLA L +L LAI + IA GT IEQG+ FY YPE+ +FGF +WR +L
Sbjct: 8 RRVLALLGDLRLAILLLLVIAIASMAGTVIEQGQSLSFYQANYPENPALFGFLSWRVLLA 67
Query: 158 LGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLP 217
LG DH++ +P +L LLV+ G SL ACT T Q+P + A+RW + K S T+P
Sbjct: 68 LGLDHVYRTPWYLTLLVLFGASLTACTLTRQVPALTTAQRWHYYQEPRQFTKLALSTTIP 127
Query: 218 RASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFR 277
+ S+ L L GY V+ LYA KGLVGR PI VH +MLLI+ GG L A F
Sbjct: 128 QGSLTALATALRAKGYRVWQTDTQLYARKGLVGRLGPIVVHASMLLILLGGILGALTGFM 187
Query: 278 GSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSLFD 337
+P G + ++ P D V VN+F++DY D+GE+ QF+SDLS+ D
Sbjct: 188 AQELIPSGETVHLQHIVEAGPLARIPQD---WSVKVNRFWIDYTDAGEIDQFYSDLSIQD 244
Query: 338 IGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKKLF 397
G+EV R TI VN PLRYGG+++YQ DW +A++ N L MAPL G +L+
Sbjct: 245 AKGQEVKRGTIHVNRPLRYGGVSLYQADWGIAAIRFRLNRSPVLQLPMAPLDTGGKGRLW 304
Query: 398 GTFLP 402
GT+LP
Sbjct: 305 GTWLP 309
>sp|Q9R6T0|CCS1_SYNP6 Cytochrome c biogenesis protein CcsB OS=Synechococcus sp. (strain
ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ccsB PE=3 SV=1
Length = 456
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 162/281 (57%), Gaps = 7/281 (2%)
Query: 124 GTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILTLGFDHMFSSPIFLGLLVMMGLSLMAC 183
GT IEQG+ FY + YP D +FGF +WRWIL+LG DH++ + FLGLL++ G SL AC
Sbjct: 46 GTVIEQGQSLAFYQENYPTDPALFGFLSWRWILSLGLDHVYRAGWFLGLLILFGASLTAC 105
Query: 184 TYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLPRASIQDLGVILMGAGYEVFLKGPSLY 243
T+ Q P ++ A+RW F K S +LP+ + L +L+ Y +F LY
Sbjct: 106 TFRRQWPALRAAQRWQFYQEPRQFTKLALSASLPQGKLDSLEPLLLQRRYRLFRADDVLY 165
Query: 244 AFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFRGSVTVPQGLNFVVGDVL--GPNGFLS 301
A +GL GR PI VH ML+++ G + G F +P G F V +++ GP
Sbjct: 166 ARRGLAGRVGPILVHAGMLVVLGGAIWGSLGGFYAQEMIPSGETFQVRNIVDAGPWSGSR 225
Query: 302 TPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSLFDIGGKEVMRKTISVNDPLRYGGITI 361
P D V VN+F++DY G + QF+SDLS+ D G+E R+TI VN PLRYGG+T
Sbjct: 226 IPQD---WAVKVNRFWIDYAPDGRIDQFYSDLSVVDREGQEQDRQTIHVNQPLRYGGLTF 282
Query: 362 YQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKKLFGTFLP 402
YQ DW+ +A QV N+ L MA L G +++GTF+P
Sbjct: 283 YQADWAIAAAQVRLNNSPVLQLPMAQLPAAG--RIWGTFVP 321
>sp|Q31RG5|CCS1_SYNE7 Cytochrome c biogenesis protein CcsB OS=Synechococcus elongatus
(strain PCC 7942) GN=ccsB PE=3 SV=1
Length = 456
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 162/281 (57%), Gaps = 7/281 (2%)
Query: 124 GTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILTLGFDHMFSSPIFLGLLVMMGLSLMAC 183
GT IEQG+ FY + YP D +FGF +WRWIL+LG DH++ + FLGLL++ G SL AC
Sbjct: 46 GTVIEQGQSLAFYQENYPTDPALFGFLSWRWILSLGLDHVYRAGWFLGLLILFGASLTAC 105
Query: 184 TYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLPRASIQDLGVILMGAGYEVFLKGPSLY 243
T+ Q P ++ A+RW F K S +LP+ + L +L+ Y +F LY
Sbjct: 106 TFRRQWPALRAAQRWQFYQEPRQFTKLALSASLPQGKLDSLEPLLLQRRYRLFRADDVLY 165
Query: 244 AFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFRGSVTVPQGLNFVVGDVL--GPNGFLS 301
A +GL GR PI VH ML+++ G + G F +P G F V +++ GP
Sbjct: 166 ARRGLAGRVGPILVHAGMLVVLGGAIWGSLGGFYAQEMIPSGETFQVRNIVDAGPWSGSR 225
Query: 302 TPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSLFDIGGKEVMRKTISVNDPLRYGGITI 361
P D V VN+F++DY G + QF+SDLS+ D G+E R+TI VN PLRYGG+T
Sbjct: 226 IPQD---WAVKVNRFWIDYAPDGRIDQFYSDLSVVDREGQEQDRQTIHVNQPLRYGGLTF 282
Query: 362 YQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKKLFGTFLP 402
YQ DW+ +A QV N+ L MA L G +++GTF+P
Sbjct: 283 YQADWAIAAAQVRLNNSPVLQLPMAQLPAAG--RIWGTFVP 321
>sp|P73912|CCS1_SYNY3 Cytochrome c biogenesis protein CcsB OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=ccsB PE=1 SV=1
Length = 458
Score = 228 bits (581), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 168/281 (59%), Gaps = 5/281 (1%)
Query: 124 GTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILTLGFDHMFSSPIFLGLLVMMGLSLMAC 183
GT IEQGE FY Q YPED +FGF +W+ IL LG + ++ + FLGLL++ G SL AC
Sbjct: 43 GTVIEQGESLSFYQQNYPEDPALFGFLSWQVILQLGLNQVYRTWWFLGLLILFGSSLTAC 102
Query: 184 TYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLPRASIQDLGVILMGAGYEVFLKGPSLY 243
T+ Q P +K AR W F H +K S +LP I + +L GY++F +G S+Y
Sbjct: 103 TFNRQFPALKAARSWQFYHQPRQFKKLALSFSLPDGDINKIESLLRDRGYKIFQEGDSVY 162
Query: 244 AFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFRGSVTVPQGLNFVVGDVL--GPNGFLS 301
A KGL+G+ PI VH AML+I+ G A F +P G F V +++ GP
Sbjct: 163 ARKGLMGKVGPIIVHGAMLIILGGAIWGALTGFFAQHMIPSGETFQVSNIIEKGPLADSQ 222
Query: 302 TPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSLFDIGGKEVMRKTISVNDPLRYGGITI 361
P D + VN+F+++Y ++G + QF+SDLS+ + G+E+ R+TISVN PLR+ G+T
Sbjct: 223 IPKD---WGIKVNRFWINYTENGAIDQFYSDLSVVNNQGEELDRQTISVNHPLRHRGVTF 279
Query: 362 YQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKKLFGTFLP 402
YQT+W + ++V N+ L MAPL+ +L+G ++P
Sbjct: 280 YQTNWGIAGVKVQLNNSPVLQLPMAPLQTANGGQLWGAYIP 320
>sp|B0JHI7|CCS1_MICAN Cytochrome c biogenesis protein CcsB OS=Microcystis aeruginosa
(strain NIES-843) GN=ccsB PE=3 SV=1
Length = 447
Score = 227 bits (578), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 168/281 (59%), Gaps = 5/281 (1%)
Query: 124 GTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILTLGFDHMFSSPIFLGLLVMMGLSLMAC 183
GT IEQG+ FY YPE +FGF TW+ +L LG +H++S+ +L LL++ G SL AC
Sbjct: 45 GTVIEQGQSLSFYQANYPEKPALFGFLTWKVLLLLGLNHVYSTWWYLSLLILFGSSLTAC 104
Query: 184 TYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLPRASIQDLGVILMGAGYEVFLKGPSLY 243
T+ Q+P +K AR W F + +K S L S++ L +L GY+VFL+ SLY
Sbjct: 105 TFRRQLPALKAARNWQFYQQSRQFQKLALSAELETGSLESLTPLLEKKGYKVFLENNSLY 164
Query: 244 AFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFRGSVTVPQGLNFVVGDVL--GPNGFLS 301
A KGL+G+ PI VH AML+I+AG A F V G +F V +++ GP S
Sbjct: 165 ARKGLIGKIGPIIVHAAMLIILAGAIWGALTGFFAQEMVASGDSFQVKNIIEAGPLSKNS 224
Query: 302 TPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSLFDIGGKEVMRKTISVNDPLRYGGITI 361
P D + VN+F++DY G+++QF+SDLS+ D G+E+ RKTI VN PL + G+T
Sbjct: 225 LPKDW---GIKVNRFWIDYSPKGDIEQFYSDLSVIDNQGQEIDRKTIQVNQPLHHKGVTF 281
Query: 362 YQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKKLFGTFLP 402
YQT W + ++V N+ L MA L G+ +++GT++P
Sbjct: 282 YQTSWGIAGVKVQVNNSPILQLPMASLDTKGNGQIWGTWIP 322
>sp|Q3M6F7|CCS1_ANAVT Cytochrome c biogenesis protein CcsB OS=Anabaena variabilis (strain
ATCC 29413 / PCC 7937) GN=ccsB PE=3 SV=1
Length = 461
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 130/312 (41%), Positives = 173/312 (55%), Gaps = 6/312 (1%)
Query: 94 KRLPRRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWR 153
K L R L L++L LAI + IA GT IEQG+ P FY YPE +FGF TW+
Sbjct: 19 KFLRREFLPVLTDLRLAIALLLIIALFSISGTVIEQGQSPAFYQANYPEHPALFGFLTWK 78
Query: 154 WILTLGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFS 213
I +G DH++ + FL LLV+ G SL ACT+T Q+P +K A+RW + +K S
Sbjct: 79 VIQVVGLDHVYRTWWFLSLLVLFGTSLTACTFTRQLPALKTAQRWKYYEEPRQFQKLALS 138
Query: 214 DTLPRASIQDLGVILMGAGYEVFL-KGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSA 272
L S+ L IL Y++F K LYA KG+VGR PI VH+ ++ I+ G A
Sbjct: 139 AELDAGSVNSLSQILQNRRYKIFQEKDDILYARKGIVGRIGPIIVHIGIVTILLGSIWGA 198
Query: 273 TGSFRGSVTVPQGLNFVVGDVL--GPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFH 330
F VP G F V +++ GP P D V VN+F++DY G + QF+
Sbjct: 199 MTGFIAQEMVPSGETFQVKNIIDAGPLAAGQFPQDW---SVRVNRFWIDYTPKGGIDQFY 255
Query: 331 SDLSLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKV 390
SD+S+ D GKEV K I VN PLRY G+T YQTDW S ++V N F L MA L
Sbjct: 256 SDMSVLDNQGKEVDHKKIFVNQPLRYHGVTFYQTDWGISGVRVRLNKSPIFQLPMALLNT 315
Query: 391 NGDKKLFGTFLP 402
NG +++GT++P
Sbjct: 316 NGQGRIWGTWIP 327
>sp|Q9R6Y2|CCS1_NOSS1 Cytochrome c biogenesis protein CcsB OS=Nostoc sp. (strain PCC 7120
/ UTEX 2576) GN=ccsB PE=3 SV=1
Length = 461
Score = 223 bits (568), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/312 (41%), Positives = 173/312 (55%), Gaps = 6/312 (1%)
Query: 94 KRLPRRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWR 153
K L R L L++L LAI + IA GT IEQG+ P FY YPE +FGF TW+
Sbjct: 19 KFLRREFLPVLTDLRLAIALLLIIALFSISGTVIEQGQSPAFYQSNYPEHPALFGFLTWK 78
Query: 154 WILTLGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFS 213
I +G DH++ + FL LLV+ G SL ACT+T Q+P +K A+RW + +K S
Sbjct: 79 VIQVVGLDHVYRTWWFLSLLVLFGTSLTACTFTRQLPALKTAQRWKYYEEPRQFQKLALS 138
Query: 214 DTLPRASIQDLGVILMGAGYEVFL-KGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSA 272
L S+ L IL Y++F K LYA KG+VGR PI VH+ ++ I+ G A
Sbjct: 139 AELDAGSVNSLSQILQNRRYKIFQEKDDILYARKGIVGRIGPIIVHIGIVTILLGSIWGA 198
Query: 273 TGSFRGSVTVPQGLNFVVGDVL--GPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFH 330
F VP G F V +++ GP P D V VN+F++DY G + QF+
Sbjct: 199 MTGFIAQEMVPSGETFQVKNIIDAGPLAAGQFPQDW---SVRVNRFWIDYTPKGGIDQFY 255
Query: 331 SDLSLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKV 390
SD+S+ D G+EV K I VN PLRY G+T YQTDW S ++V N F L MA L
Sbjct: 256 SDMSVLDNQGQEVDHKKIFVNQPLRYHGVTFYQTDWGISGVRVRLNKSPIFQLPMALLNT 315
Query: 391 NGDKKLFGTFLP 402
NG +++GT++P
Sbjct: 316 NGQGRIWGTWIP 327
>sp|B0CDA5|CCS1_ACAM1 Cytochrome c biogenesis protein CcsB OS=Acaryochloris marina
(strain MBIC 11017) GN=ccsB PE=3 SV=1
Length = 456
Score = 217 bits (552), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/307 (38%), Positives = 175/307 (57%), Gaps = 6/307 (1%)
Query: 98 RRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILT 157
+ ++ L++L LAI + AIA GT IEQG+ +FY YPE+ +FGF TW+ ++T
Sbjct: 14 KTLVPVLADLRLAIVLLLAIALFSISGTVIEQGQSLEFYQANYPEEPALFGFLTWKVLVT 73
Query: 158 LGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLP 217
+G DH++++ FL LL++ G SL ACT+ Q+P +K AR W F K S TL
Sbjct: 74 IGLDHVYATWWFLSLLILFGTSLTACTFMRQLPALKAARSWQFYKKPRQFGKLALSTTLD 133
Query: 218 RASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFR 277
L L Y+VF + S+YA KG+ GR PI VH +M+LI+ G + F
Sbjct: 134 PDQKPSLLKALEKNRYKVFEEDQSIYARKGITGRIGPIIVHASMILILLGSIWGSLTGFM 193
Query: 278 GSVTVPQGLNFVVGDVL--GPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSL 335
+P G V +++ GP P D V VN+F++DY G++ QF+SDLS+
Sbjct: 194 AQEMIPSGTTAKVSNIVKSGPWSGAQIPRDW---AVQVNRFWIDYTPEGQIDQFYSDLSI 250
Query: 336 FDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKK 395
D E+ R+TI VN PL++ G+T+YQ DWS + ++V N+ L MAPL+ G +
Sbjct: 251 VDEDKNELDRQTIHVNQPLKHKGVTLYQADWSIAGVRVQLNNSPVLQLPMAPLEAAGG-R 309
Query: 396 LFGTFLP 402
++GT++P
Sbjct: 310 IWGTWVP 316
>sp|B2J814|CCS1_NOSP7 Cytochrome c biogenesis protein CcsB OS=Nostoc punctiforme (strain
ATCC 29133 / PCC 73102) GN=ccsB PE=3 SV=1
Length = 465
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 176/310 (56%), Gaps = 5/310 (1%)
Query: 96 LPRRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWI 155
L + +L L+NL LAI + IA + GT IEQG+ P FY YPE +FGF TW+ I
Sbjct: 21 LRQELLPVLTNLRLAIALLLLIAIFSSTGTVIEQGQSPAFYQANYPEHPALFGFLTWKVI 80
Query: 156 LTLGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDT 215
+G DH++ + FL LL++ G SL AC++T Q+P +K A+RW + +K S
Sbjct: 81 QVVGLDHVYRTWWFLALLILFGTSLTACSFTRQLPALKAAQRWKYYEEPRQFQKLALSAE 140
Query: 216 LPRASIQDLGVILMGAGYEVF---LKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSA 272
L S+ L +L Y++F K LYA KG+VGR PI VH+ ++ I+ GG A
Sbjct: 141 LDNGSLNSLSQLLQKRRYKIFPDREKENILYARKGIVGRIGPIIVHIGIVAILLGGIWGA 200
Query: 273 TGSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSD 332
F V G F V +++ + + +S V VN+F++DY SG + QF+SD
Sbjct: 201 MTGFMAQEMVASGDTFQVTNIVDAGPLAAQVSKDWS--VRVNRFWIDYTPSGGIDQFYSD 258
Query: 333 LSLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNG 392
+S+ + G+EV K I VN+PLRY GIT YQTDW + ++V N+ F L MA L G
Sbjct: 259 MSVLNKQGEEVDHKKIFVNEPLRYRGITFYQTDWGIAGVRVQFNNSPIFQLPMALLNTKG 318
Query: 393 DKKLFGTFLP 402
+++GT++P
Sbjct: 319 QGRIWGTWVP 328
>sp|Q7NJ11|CCS1_GLOVI Cytochrome c biogenesis protein CcsB OS=Gloeobacter violaceus
(strain PCC 7421) GN=ccsB PE=3 SV=1
Length = 474
Score = 211 bits (537), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 172/312 (55%), Gaps = 4/312 (1%)
Query: 92 LVKRLPRRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPV-FGFF 150
L + + V A L +L LAIG AIAA GT I QGE DFY Q YP+ V +GF
Sbjct: 21 LWRDIRHEVAAWLGSLKLAIGLFLAIAAASIAGTVIPQGESTDFYRQNYPDSGAVVWGFV 80
Query: 151 TWRWILTLGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQ 210
TWR+I++LG D ++ S F+ LL+++ SL CT+ QIP++K A+ W F + K
Sbjct: 81 TWRFIISLGLDEVYRSWWFVALLLLLATSLTICTFRRQIPMLKAAQNWKFYTEPRQLSKY 140
Query: 211 EFSDTLPRASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTL 270
+P L L Y+V+ + +YA KG +GR PI VH+++LLIMAG +
Sbjct: 141 ALRTAIPARGTGPLAEQLRAGRYKVYQRDDLIYATKGTIGRVGPIVVHVSLLLIMAGAMI 200
Query: 271 SATGSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFH 330
A G ++ G +F + V L+ P D V VNKF++DY G V QFH
Sbjct: 201 GAFGGYQTQRMTLAGDSFDIQQVEQSRLSLARPPD---WTVRVNKFWIDYRPDGSVDQFH 257
Query: 331 SDLSLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKV 390
SDLS+ GKE+ RKTISVNDPL Y G+T+YQ W+ A ++ ND + M P++
Sbjct: 258 SDLSVVSPAGKELERKTISVNDPLIYDGVTMYQASWAVGAFKLRLNDSPVLTIPMQPIEA 317
Query: 391 NGDKKLFGTFLP 402
++ +G +P
Sbjct: 318 PNGQEAWGQAIP 329
>sp|Q4G3C0|CCS1_EMIHU Cytochrome c biogenesis protein ccs1 OS=Emiliania huxleyi GN=ccs1
PE=3 SV=1
Length = 440
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 168/301 (55%), Gaps = 3/301 (0%)
Query: 99 RVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILTL 158
++L L++L LAI +A+I L+ALGT IEQ + FY + YP P+ GF W++I +L
Sbjct: 11 KLLKKLADLRLAIWLLASIGILIALGTFIEQDQPLAFYQENYPTTAPILGFVDWKFITSL 70
Query: 159 GFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLPR 218
+ ++S+ F G++ SL+ACTYTTQIP +K R W F+ + +++RK + LPR
Sbjct: 71 NLNTLYSNIWFFGIVGFFASSLLACTYTTQIPALKKFRLWEFITNFKSLRKFQLKRQLPR 130
Query: 219 ASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFRG 278
L G Y VF +G YA+ GL+GR PI VH ++L ++ G A G +
Sbjct: 131 NLASTSVYQLYGKNYHVFRQGKKNYAYSGLLGRVGPILVHFSILFVLFGSACGALGGYTV 190
Query: 279 SVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSLFDI 338
VP+G F + +++ P VN F++ Y + +V QF+SDLS+ D+
Sbjct: 191 QEIVPRGEIFHLQNLVKSGNLSKIPQ---YLSWRVNDFWITYTEEAKVNQFYSDLSILDV 247
Query: 339 GGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKKLFG 398
G+EV RK I VN+PL Y G+++YQTDW L++ ND+ + + + +G G
Sbjct: 248 KGQEVKRKIIFVNEPLVYNGVSVYQTDWDILGLKLKLNDQQTIQVPLNKISKSGRNFWLG 307
Query: 399 T 399
+
Sbjct: 308 S 308
>sp|P49539|CCS1_ODOSI Cytochrome c biogenesis protein ccs1 OS=Odontella sinensis GN=ccs1
PE=3 SV=2
Length = 421
Score = 194 bits (494), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 161/307 (52%), Gaps = 5/307 (1%)
Query: 96 LPRRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWI 155
+ + VL L++L AI + IA+ +GT IEQ + + Y YP N +FGF +W I
Sbjct: 1 MKQSVLRFLADLRFAISILLIIASCSVIGTVIEQDQSIEIYKLNYPLTNRIFGFLSWDII 60
Query: 156 LTLGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDT 215
L G DH++ + FLG + + GLSL CT Q P +K+ARR F + + + S
Sbjct: 61 LKFGLDHVYKTWWFLGFIALFGLSLFTCTILQQFPSLKIARRCQFFRTTQQFGLLKLSRN 120
Query: 216 LPRASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATGS 275
L S+ L + Y +F + +Y +KGL+GR API VH +M+LI+ G A
Sbjct: 121 LGNLSLSQLLFRIKKNQYSIFQQKNIVYCYKGLIGRIAPIIVHFSMILILIGAIFGALNG 180
Query: 276 FRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSL 335
F+ +P+ F V ++L NG L+ S VN F++ Y V QF+SD+S+
Sbjct: 181 FKAQELIPKTEAFHVQNILS-NGQLTRIPKVVS---RVNDFWITYTKQATVAQFYSDVSI 236
Query: 336 FDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKK 395
+ G E++RKTI VN P++Y I YQTDW+ L+V + + L N K
Sbjct: 237 LNTEGNEIVRKTIFVNSPIKYNNIDFYQTDWNVIGLRVQNDTSSILQYPLINL-TNAGNK 295
Query: 396 LFGTFLP 402
++ T++P
Sbjct: 296 VWVTWIP 302
>sp|A6MVS2|CCS1_RHDSA Cytochrome c biogenesis protein ccs1 OS=Rhodomonas salina GN=ccs1
PE=3 SV=1
Length = 441
Score = 192 bits (488), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/323 (35%), Positives = 174/323 (53%), Gaps = 3/323 (0%)
Query: 93 VKRLPRRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTW 152
+ + R+ ++ L NL LAI + +A A GT IEQ + FY YP P+FGF +
Sbjct: 5 INQYFRKSISVLGNLKLAIILLLMLALFSAFGTVIEQNQNVAFYENSYPNSAPLFGFLSA 64
Query: 153 RWILTLGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEF 212
IL LG ++++ + F L++++ +SL +CT QIP +K+AR W F ++++K
Sbjct: 65 NAILFLGLNNIYQTWWFTTLILLLAVSLFSCTLARQIPSLKMARLWQFYTKDQSLKKIGL 124
Query: 213 SDTLPRASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSA 272
S L + S+ L L Y V KG LYA+KGL G+ PI VH ++++I+ G L
Sbjct: 125 SFNLQKTSLSKLAFTLKTDDYNVIQKGRFLYAYKGLPGKIGPIIVHASLIIILFGALLGN 184
Query: 273 TGSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSD 332
F VP G F + +++ +G LS F E +V F + Y D G + QF+SD
Sbjct: 185 LSGFVSQELVPLGGVFHIQNIIN-SGTLSYVPQNF--EGYVKDFKIAYNDEGSIDQFYSD 241
Query: 333 LSLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNG 392
LS+ + G+EV KTI VN+PLRY GI YQTDWS + L + + + L + + V G
Sbjct: 242 LSILNSTGEEVRSKTIYVNEPLRYEGIVFYQTDWSITNLAINVDQQTNIQLPLKSINVKG 301
Query: 393 DKKLFGTFLPLGDVNSPNVKGIL 415
+ K + LP+ +V IL
Sbjct: 302 EGKFWIASLPIANVEKATNDNIL 324
>sp|A0T0G8|CCS1_PHATC Cytochrome c biogenesis protein ccs1 OS=Phaeodactylum tricornutum
(strain CCAP 1055/1) GN=ccs1 PE=3 SV=1
Length = 420
Score = 191 bits (486), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 152/277 (54%), Gaps = 4/277 (1%)
Query: 96 LPRRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWI 155
+ +++ L++L +I + I+ +GT IEQ + + Y YP NPVFG TW I
Sbjct: 1 MKQQIFRLLADLRFSIFLLLLISFCSIVGTVIEQDQSIEIYKTNYPLTNPVFGVLTWDRI 60
Query: 156 LTLGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDT 215
L G DH++ + F L+ + GLSL+ CT+ Q+P +K+ARR F + + + S
Sbjct: 61 LLFGLDHVYRTWWFFALIFLFGLSLILCTFLQQLPSLKIARRCQFFRTTNQFYRLKISTV 120
Query: 216 LPRASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATGS 275
L S + + G+ Y +F + +Y +KGL+GR API VHL+M+LI+ G + +
Sbjct: 121 LNDFSFNKILGRITGSQYSIFQQKNIVYCYKGLIGRIAPILVHLSMILILVGTIVGSLFG 180
Query: 276 FRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSL 335
F+ VP+ NF + ++L P T +N F++ Y + V QF+SD+S+
Sbjct: 181 FKAQEIVPKTENFHIQNILANGQLTVIP----KTSARINDFWITYTKTKTVSQFYSDISI 236
Query: 336 FDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQ 372
+ G E+ RKTISVN PL + G+ YQTDW+ L+
Sbjct: 237 LNKQGNEIERKTISVNHPLIHNGVYYYQTDWNLVGLR 273
>sp|A0T0W1|CCS1_THAPS Cytochrome c biogenesis protein ccs1 OS=Thalassiosira pseudonana
GN=ccs1 PE=3 SV=1
Length = 421
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 161/306 (52%), Gaps = 5/306 (1%)
Query: 96 LPRRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWI 155
+ + + ++++L AI + IAA +GT IEQ + + Y YP N VFGF +W I
Sbjct: 1 MKQNIFKSIADLRFAIFILLVIAAFSVIGTVIEQDQSIETYKLNYPLTNRVFGFLSWDII 60
Query: 156 LTLGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDT 215
L G DH++ + F+ L+++ G+SL+ CT Q P +K+ARR F + + + S
Sbjct: 61 LKFGLDHVYKTWWFITLILLFGISLLTCTLLQQFPSLKIARRCQFFRTTQQFCRLNISTN 120
Query: 216 LPRASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATGS 275
L S L + Y +F + +Y +KGL+GR API VH +M++I+ G + +
Sbjct: 121 LKHLSFSQLLFKIKENNYSIFQQKNIIYCYKGLIGRIAPIIVHFSMIIILIGAIIGSLSG 180
Query: 276 FRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSL 335
F+ VP+ F + +VL F P V +N F++ Y + QF+SDLS+
Sbjct: 181 FKAQEIVPKTETFHIQNVLNNGQFTFIP----KVSVRINDFWITYTKQTTITQFYSDLSI 236
Query: 336 FDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKK 395
+I G E+ R+TI VN P +Y GI YQTDW+ L++ D F L N +K
Sbjct: 237 LNIDGNEIDRQTIFVNSPAKYNGIDYYQTDWNIIGLRLRMQDSSIFQYPFINLP-NTQEK 295
Query: 396 LFGTFL 401
L+ T++
Sbjct: 296 LWLTWI 301
>sp|B2XTT2|CCS1_HETA4 Cytochrome c biogenesis protein ccs1 OS=Heterosigma akashiwo
(strain CCMP452) GN=ccs1 PE=3 SV=1
Length = 426
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 180/317 (56%), Gaps = 11/317 (3%)
Query: 98 RRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILT 157
++ L+NL AI + I+ + G+ IEQ + D+Y Q YP NP+ GF TW+ I
Sbjct: 2 EKIFKILANLKFAIALLLLISITITFGSIIEQDQTLDYYKQNYPLTNPIGGFLTWKVINM 61
Query: 158 LGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLP 217
+H++ + F+ LL+ +G+SL+ACT+ Q P +K +RR F ++ RK +F L
Sbjct: 62 FQLNHIYKNFWFISLLLSLGISLIACTFFQQFPGIKFSRRCYFSNNP---RKTDFQTQLK 118
Query: 218 RASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFR 277
+++ ++ GY VF + + Y KG++GR AP+ VHL+++LI+ G ++ G F
Sbjct: 119 TNLSRNIIYTIISEGYFVFQQKKNFYGTKGIIGRIAPVFVHLSIILILLGSIFASLGGFN 178
Query: 278 GSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTE-VHVNKFYMDYYDSGEVKQFHSDLSLF 336
+ +G F + +V S P S + + VN F+++YY + ++KQF+S+LS+
Sbjct: 179 SQELIGKGEIFHIQNVTS-----SGPLTKLSQQAIRVNDFWINYYPNNKIKQFYSNLSII 233
Query: 337 DIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKKL 396
+ G+EV KTISVN PL Y +T YQTDW+ L++ N++ F + + N + K+
Sbjct: 234 NGDGQEVRSKTISVNKPLIYKDLTFYQTDWNLLGLRISHNNKN-FQIPVIQTTQNLN-KV 291
Query: 397 FGTFLPLGDVNSPNVKG 413
+ T+LPL S N+ G
Sbjct: 292 WLTWLPLESNTSKNLSG 308
>sp|Q1XDC4|CCS1_PORYE Cytochrome c biogenesis protein ccs1 OS=Porphyra yezoensis GN=ccs1
PE=3 SV=1
Length = 440
Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 155/296 (52%), Gaps = 6/296 (2%)
Query: 94 KRLPRRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWR 153
K + +L SNL +I + IA +GT IEQ + FY +Y N + W+
Sbjct: 12 KDIRWYLLRLFSNLQFSIILLLLIAIFSTIGTVIEQNKESSFYQTQYTLSNEYYNILNWK 71
Query: 154 WILTLGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFS 213
I GF+H++++ FL LL + LSL C+ + QIP ++ ARRW F + +K S
Sbjct: 72 NIELFGFNHVYTTWWFLSLLFIFSLSLFTCSISRQIPSLQNARRWHFYKNPNQFKKFTGS 131
Query: 214 DTLPRASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSAT 273
+ + L L Y +F +G S+Y +KGL+GR API VH +++L++ G L
Sbjct: 132 QEIKTTQLNLLASCLQNYNYHIFQQGKSIYGYKGLLGRLAPIFVHGSIILLLTGSVLGLV 191
Query: 274 GSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDL 333
F VP G F + +++ F P + FS VN F ++Y + + QF SD+
Sbjct: 192 SGFSAQEMVPSGELFRLQNIISSGKFSYIPQE-FSA--RVNDFNIEYNPNKSISQFFSDI 248
Query: 334 SLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLK 389
S+ + GKE+ R TI VN PL + G+TIYQTDW A++V N+ N+ PLK
Sbjct: 249 SILNSEGKELKRSTIYVNKPLEFHGLTIYQTDWDIIAIRVRINNG---NILQIPLK 301
>sp|B2XTC6|CCS1_HETA2 Cytochrome c biogenesis protein ccs1 OS=Heterosigma akashiwo
(strain NIES-293) GN=ccs1 PE=3 SV=1
Length = 423
Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 180/317 (56%), Gaps = 11/317 (3%)
Query: 98 RRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILT 157
++ L+NL AI + I+ + G+ IEQ + D+Y Q YP NP+ GF TW+ I
Sbjct: 2 EKIFKILANLKFAIALLLLISITITFGSIIEQDQTLDYYKQNYPLTNPIGGFLTWKVINM 61
Query: 158 LGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLP 217
+H++ + F+ LL+ +G+SL+ACT+ Q P +K +RR F ++ RK +F L
Sbjct: 62 FQLNHIYKNFWFISLLLSLGISLIACTFFQQFPGIKFSRRCYFSNNP---RKTDFQTQLK 118
Query: 218 RASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFR 277
+++ ++ GY VF + + Y KG++GR AP+ VHL+++LI+ G ++ G F
Sbjct: 119 TNLSRNIIYTIISEGYFVFQQKKNFYGTKGIIGRIAPVFVHLSIILILLGSIFASLGGFN 178
Query: 278 GSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTE-VHVNKFYMDYYDSGEVKQFHSDLSLF 336
+ +G F + +V S P S + + VN F+++YY + ++KQF+S+LS+
Sbjct: 179 SQELIGKGEIFHIQNVTS-----SGPLTKLSQQAIRVNDFWINYYPNNKIKQFYSNLSII 233
Query: 337 DIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKKL 396
+ G+EV KTISVN PL Y +T YQTDW+ L++ N++ F + + N + K+
Sbjct: 234 NGDGQEVRSKTISVNKPLIYKDLTFYQTDWNLLGLRISHNNKN-FQIPVIQTTQNLN-KV 291
Query: 397 FGTFLPLGDVNSPNVKG 413
+ T+LPL S N+ G
Sbjct: 292 WLTWLPLESNTSKNLSG 308
>sp|P51363|CCS1_PORPU Cytochrome c biogenesis protein ccs1 OS=Porphyra purpurea GN=ccs1
PE=3 SV=1
Length = 437
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 3/299 (1%)
Query: 100 VLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILTLG 159
+L SNL +I + IA+ +GT IEQ + DFY Y F W+ I G
Sbjct: 16 LLRLFSNLQFSIILLLVIASFSVIGTIIEQNKDLDFYQAHYSVSGEHFIILNWKNIELFG 75
Query: 160 FDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLPRA 219
+H++++ FL LL + LSL+ C+ + QIP ++ ARRW F + +K S + +
Sbjct: 76 LNHVYTTWWFLTLLFIFSLSLLVCSLSRQIPSLQNARRWCFYKNPNQFKKFTGSQEIQKT 135
Query: 220 SIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFRGS 279
++ + L Y +F +G S+Y +KGL+GR API VH +++L++ G L F
Sbjct: 136 TLHLVASCLQKFNYHIFQQGNSIYCYKGLLGRLAPIFVHASIILLLIGSVLGLVSGFSAQ 195
Query: 280 VTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSLFDIG 339
VP G F + +++ F P D FS VN F ++Y + QF SD+S+ D
Sbjct: 196 EMVPSGELFRLQNIIASGQFSYIPQD-FSAR--VNNFIIEYNQDNSISQFFSDISILDTE 252
Query: 340 GKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKKLFG 398
G E+ TI VN PL++ G+TIYQTDW A+++ N+ + + + + +K G
Sbjct: 253 GTELKHSTIHVNSPLQFKGLTIYQTDWDIIAIRIKINNTDTLQIPLKKVVLPNNKIWVG 311
>sp|Q6B926|CCS1_GRATL Cytochrome c biogenesis protein ccs1 OS=Gracilaria tenuistipitata
var. liui GN=ccs1 PE=3 SV=1
Length = 435
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 148/282 (52%), Gaps = 5/282 (1%)
Query: 124 GTAIEQGEVPDFYFQKYPEDNPVFG-FFTWRWILTLGFDHMFSSPIFLGLLVMMGLSLMA 182
GT IEQ + +Y YP +N FG W+ IL LG DH++ +P F+ +LV+ SL+A
Sbjct: 34 GTIIEQNQSIVYYQMNYPINNQPFGRIMNWKIILNLGLDHIYLNPCFVLVLVLFFCSLLA 93
Query: 183 CTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLPRASIQDLGVILMGAGYEVFLKGPSL 242
CT++ Q+P ++ AR+W FL I L + SI ++ L Y +F K ++
Sbjct: 94 CTFSNQLPSLRNARKWKFLQYKNHINCNNHFVELDKISICNIIYSLYSNNYYIFHKENNI 153
Query: 243 YAFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFRGSVTVPQGLNFVVGDVLGPNGFLST 302
YA+KGL GR API VH +++L G +S G F +P G F + +++ +GF S
Sbjct: 154 YAYKGLSGRIAPIVVHFSIILTFIGSLISLLGGFTAQEIIPTGEIFHIKNII-QSGFNSE 212
Query: 303 PTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSLFDIGGKEVMRKTISVNDPLRYGGITIY 362
+ + ++ F + Y V+QF S + +++ GK + +K +SVN PL GIT Y
Sbjct: 213 IPNNITGKIK--DFDIKYGPDNSVEQFVSKIIIYNNQGKNINQKQVSVNSPLILKGITFY 270
Query: 363 QTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKKLFGTFLPLG 404
QTDW L+ + + K+N ++ L+ LPL
Sbjct: 271 QTDWKIDTLRFKIGNSKIIQQPIIKYKIN-NQILWSCRLPLN 311
>sp|Q3AZN7|CCS1_SYNS9 Cytochrome c biogenesis protein CcsB OS=Synechococcus sp. (strain
CC9902) GN=ccsB PE=3 SV=1
Length = 426
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 153/309 (49%), Gaps = 18/309 (5%)
Query: 98 RRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILT 157
+R++A LS+L +AI + IA A+GTAI QG+ P Y + Y P G +L
Sbjct: 2 KRLIAWLSDLRVAIVLLFLIALASAVGTAIPQGDAPRSYVEAY-ATRPWLGLLNGEQVLQ 60
Query: 158 LGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLP 217
L DH++SS FL LL +GL+L+ C++ Q P ++ ARRW + + K +++LP
Sbjct: 61 LQLDHVYSSVWFLSLLAWLGLALILCSWRRQWPALQAARRWIDYSNPRQLSKLAIAESLP 120
Query: 218 ----RASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSAT 273
+++Q +L G+ + K L A KG GR P+ VH ++L+M G
Sbjct: 121 CTDSNSALQAFSTVLSQQGWRLERKDNRLAARKGTAGRVGPLLVHTGLILLMLGAVWGVL 180
Query: 274 GSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDL 333
R + G D+L +G D+ + + F +D +G +QF S L
Sbjct: 181 AGNRLERFLAPGRTL---DLLSRDG------DS-QVSILLEAFQVDRDPAGRAEQFRSQL 230
Query: 334 SLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGD 393
L + G + + ISVN PLR+ GITIYQ DWS +A+ + LA+ G+
Sbjct: 231 HLEENGNS--LDREISVNHPLRHRGITIYQADWSLAAITLQIGRSPQLQLALRSFPELGE 288
Query: 394 KKLFGTFLP 402
+++G LP
Sbjct: 289 -QVWGLVLP 296
>sp|Q46J48|CCS1_PROMT Cytochrome c biogenesis protein CcsB OS=Prochlorococcus marinus
(strain NATL2A) GN=ccsB PE=3 SV=1
Length = 426
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 153/310 (49%), Gaps = 21/310 (6%)
Query: 99 RVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILTL 158
+VL LS+L +AI + IA A GT I Q E FY+ + NP G + +L
Sbjct: 6 QVLNWLSSLKIAILLLLVIAVSCAAGTLIPQQESNQFYYDNF-NKNPFLGIINAKILLLF 64
Query: 159 GFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTL-- 216
FDH+++S FL LL+ +GL+L C++ Q+P++K A W S I K + T+
Sbjct: 65 EFDHVYTSFWFLFLLIWLGLALSVCSFRRQLPILKSALNWIDYKSPSQIAKLSVAQTIVT 124
Query: 217 --PRASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATG 274
S++ + + L G+ V + A +G++GR PI +HL M+L+M G T G
Sbjct: 125 NNCAKSLEKIKLNLKKQGWNVKETDGRIAARQGVIGRLGPILIHLGMILLMIGATY---G 181
Query: 275 SFRGSVTVPQGLNFVVGDVLGPNGFLS--TPTDAFSTEVHVNKFYMDYYDSGEVKQFHSD 332
S G + L P + + + + KF ++ G +Q+ S
Sbjct: 182 SLNGK---------TIEKFLAPGRSIDLLNNNEEKGLTIELQKFQIERDPQGRAEQYKSI 232
Query: 333 LSLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNG 392
+++ + G K ISVN PLRY G+T+YQ DWS +A+ + ++ + + P+ G
Sbjct: 233 VNVIEPNGNN-QSKEISVNYPLRYKGLTLYQADWSLAAITIKIDNSPKLQIPIKPISELG 291
Query: 393 DKKLFGTFLP 402
+ +++GT +P
Sbjct: 292 E-QVWGTIIP 300
>sp|A9BCE8|CCS1_PROM4 Cytochrome c biogenesis protein CcsB OS=Prochlorococcus marinus
(strain MIT 9211) GN=ccsB PE=3 SV=1
Length = 429
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 156/311 (50%), Gaps = 22/311 (7%)
Query: 99 RVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILTL 158
RVL LS+L +AI + IA A+GT I QG+ D Y Y + +P G IL +
Sbjct: 6 RVLNWLSSLKVAILLLFFIALASAIGTFIPQGDQSDNYINNYAK-HPWLGLINGHLILRM 64
Query: 159 GFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLPR 218
DH++SS FL LL +G++LM C++ Q P +K A +W + I+K S+
Sbjct: 65 QLDHVYSSYWFLFLLSWLGIALMICSWRRQWPTLKAAMKWIDYDQSTQIKKLAISE---E 121
Query: 219 ASIQDLGVI-------LMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLS 271
+QD G+ L+ +G++V + A KG++GRF P VH ++ +M G TL
Sbjct: 122 VIVQDSGLAIKKLHNQLISSGWDVKADSNRIAARKGVIGRFGPPLVHFGLIFLMIGATLG 181
Query: 272 ATGSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHS 331
A R + G + D++ P+G ++ + F + +G+ +QF S
Sbjct: 182 ALEGQRVEKFLEPGKSI---DLISPDGI-------NKLKIKLKDFQILRLPNGQPEQFLS 231
Query: 332 DLSLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVN 391
+ L D ++ + + ISVN PLR+ G+TIYQ DW+ S + + + L + +
Sbjct: 232 KVELSDGSNQQPISREISVNHPLRFQGLTIYQADWALSGINMQFGNSPKLQLPLKAIPEL 291
Query: 392 GDKKLFGTFLP 402
G+ +++G LP
Sbjct: 292 GE-QVWGISLP 301
>sp|O78437|CCS1_GUITH Cytochrome c biogenesis protein ccs1 OS=Guillardia theta GN=ccs1
PE=3 SV=1
Length = 414
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 160/297 (53%), Gaps = 17/297 (5%)
Query: 99 RVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILTL 158
+ L L+NL +AI + AIA ALGT IEQ + DFY + YP P+F F T IL
Sbjct: 6 KFLNKLNNLTVAIIILLAIALASALGTVIEQNKNTDFYLKNYPLTKPLFNFVTSDLILKF 65
Query: 159 GFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLPR 218
G DH+++S F+ L++++ LSL CT T Q+P +K+AR W F + K +
Sbjct: 66 GLDHVYTSWWFIFLIILLLLSLTLCTITRQLPALKLARLWQFYTNFNTKAKFQIRFKTNS 125
Query: 219 ASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFRG 278
+S+ L L Y++ +YA+KG+ GR +PI VH ++++++ G LS T +G
Sbjct: 126 SSLTKLTYYLEEKNYKIKHFNHFVYAYKGIFGRVSPIIVHFSLVIVLIGSMLSTT---QG 182
Query: 279 SVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSLFDI 338
F+V + P D + E +VN F + Y G + QF+SDL L +
Sbjct: 183 RTQEA----FIVVNQEKP------VLDTY--EAYVNDFKIAYNSQGLIDQFYSDLIL-ET 229
Query: 339 GGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKV-NGDK 394
++KTI VN+PL Y ITIYQTDW+ L + +++ +++ + +++ NG +
Sbjct: 230 RQASKIQKTIYVNEPLNYSNITIYQTDWNIDNLVICIDNQNYYSIPLQFIELPNGSE 286
>sp|A2BYI5|CCS1_PROM5 Cytochrome c biogenesis protein CcsB OS=Prochlorococcus marinus
(strain MIT 9515) GN=ccsB PE=3 SV=1
Length = 428
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 157/319 (49%), Gaps = 21/319 (6%)
Query: 98 RRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILT 157
+ ++ +S+L AI + IA +GT I QG P Y Y E P+FG ++
Sbjct: 5 KNLILKISSLKFAITLIIFIAITSGVGTFIPQGNDPQEYIDFYNE-TPIFGLINGYQVIK 63
Query: 158 LGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLP 217
L +H+++S FL L+++ +SL AC++ QIP +K A +W+ + + K + +
Sbjct: 64 LQLNHVYTSNWFLFSLILLCISLAACSFRRQIPSLKAALKWTDYKNEKRFYKLQLTTNYK 123
Query: 218 RASIQDLGVILMG------AGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLS 271
+ QD+ IL G+ + L A KGLVG+ PI VH+ +++++ G S
Sbjct: 124 VS--QDVNHILKADSLLRKKGWSISKFENRLSARKGLVGKLGPIIVHIGLIILLIG---S 178
Query: 272 ATGSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHS 331
A G+F S + Q L LG + L + +N F ++ G+ KQF S
Sbjct: 179 AYGNF-SSQSKEQYLR------LGESLDLINENKNSKFTIKLNNFLIERESDGKPKQFIS 231
Query: 332 DLSLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVN 391
L+ F KT VN P+R+ G+TIYQ DWS S + VL+ D + L + P+
Sbjct: 232 YLNFFSEEQHLNEIKTTQVNHPIRFRGLTIYQADWSVSNI-VLEIDSVLYQLKLKPIPEI 290
Query: 392 GDKKLFGTFLPLGDVNSPN 410
GD +++G + LG N N
Sbjct: 291 GD-QIWGLLIELGRENKKN 308
>sp|B1X3X2|CCS1_PAUCH Cytochrome c biogenesis protein ccsB OS=Paulinella chromatophora
GN=ccsB PE=3 SV=1
Length = 435
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 155/318 (48%), Gaps = 25/318 (7%)
Query: 98 RRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILT 157
+ VL +S+L +AI + IA +LGTA+ Q E + Y++ Y +P F+ I+
Sbjct: 2 KHVLKWISDLRVAIFLLLIIALSSSLGTALPQKESAESYYEAY-NSSPWLKVFSGESIIQ 60
Query: 158 LGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTL- 216
L DH++SS FL LL+ +G++L+ C++ Q+P ++ RW + + K ++T+
Sbjct: 61 LQLDHVYSSDWFLSLLLWLGIALVFCSWRRQLPALQFTLRWIDYCNPRQLSKLALAETII 120
Query: 217 ---PRASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSAT 273
ASI+ L +L G++V K L A +G+ GR P+ VH ++++M G
Sbjct: 121 STDASASIKRLEQLLKNQGWQVQAKSGRLAARRGIAGRVGPLMVHTGLVILMLGAVWGVL 180
Query: 274 GSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDL 333
G R + G ++L +G + + F ++ G +Q+ S L
Sbjct: 181 GGHRLERFLAPGREM---ELLNSHG-------KSQLNIALESFQIERDPVGRPEQYRSQL 230
Query: 334 SLFDIGGK---------EVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLA 384
L ++G + + + ISVN PLRYGG+T+YQ DW+ +A+ V L
Sbjct: 231 RLRELGNSRENNSGSIDKSLNREISVNHPLRYGGMTVYQADWALAAITVQLGRSPLLQLP 290
Query: 385 MAPLKVNGDKKLFGTFLP 402
+ G+ +++G LP
Sbjct: 291 LEQFPQLGE-QVWGVVLP 307
>sp|A2C4K5|CCS1_PROM1 Cytochrome c biogenesis protein CcsB OS=Prochlorococcus marinus
(strain NATL1A) GN=ccsB PE=3 SV=1
Length = 426
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 152/310 (49%), Gaps = 21/310 (6%)
Query: 99 RVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILTL 158
+VL LS+L +AI + IA A GT I Q E FY+ + NP G +L
Sbjct: 6 QVLNWLSSLKIAILLLLLIAISCAAGTLIPQQESNQFYYDNF-NKNPFLGIINANILLLF 64
Query: 159 GFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTL-- 216
FDH+++S FL LL+ +GL+L C++ Q+P++K A W S I K + T+
Sbjct: 65 EFDHVYTSFWFLFLLIWLGLALSVCSFRRQLPILKSALNWIDYKSPRQIAKLSVAQTIVT 124
Query: 217 --PRASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATG 274
S++ + + L G+ V + A +G++GR PI +HL M+L+M G T G
Sbjct: 125 NNCSESLEKIKLNLKKQGWNVKETDGRIAARQGVIGRLGPILIHLGMILLMIGATY---G 181
Query: 275 SFRGSVTVPQGLNFVVGDVLGPNGFLS--TPTDAFSTEVHVNKFYMDYYDSGEVKQFHSD 332
S G + L P + + + + KF ++ G +Q+ S
Sbjct: 182 SLNGK---------TIEKFLAPGRSIDLLNNNEEKGLTIELQKFQIERDPQGRAEQYKSI 232
Query: 333 LSLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNG 392
+++ + G K ISVN PLRY G+T+YQ DWS +A+ + ++ + + P+ G
Sbjct: 233 VNVIEPNGSN-ESKEISVNYPLRYKGLTLYQADWSLAAITIQIDNSPKLQIPIEPISELG 291
Query: 393 DKKLFGTFLP 402
+ +++GT +P
Sbjct: 292 E-QVWGTVIP 300
>sp|A3PEU8|CCS1_PROM0 Cytochrome c biogenesis protein CcsB OS=Prochlorococcus marinus
(strain MIT 9301) GN=ccsB PE=3 SV=1
Length = 428
Score = 129 bits (323), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 163/323 (50%), Gaps = 21/323 (6%)
Query: 92 LVKRLPRRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFT 151
+VK L R+ S+L AI + IA +GT I QG FY + + E P+FGF
Sbjct: 3 IVKDLIFRI----SSLKFAISLIIFIAISSGVGTFIPQGSNSKFYIENFDEA-PIFGFLN 57
Query: 152 WRWILTLGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQE 211
+L L DH+++S FL L+++ +SL AC++ QIP +K + +W S + RK +
Sbjct: 58 GEKVLILQLDHIYTSLWFLFALILLCISLAACSFRRQIPSLKASLKWIEYKSEKKFRKLQ 117
Query: 212 FSDTLPRASIQDL----GVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAG 267
+ + ++DL + L G++ + + A KGL+G+ P+ VH+ +++++ G
Sbjct: 118 LNSSYQINEVEDLISKADLFLKKRGWKTYKFKSHISARKGLIGKIGPLVVHIGLIVLLIG 177
Query: 268 GTLSATGSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVK 327
SA GSF S + Q L + G+ L ++ T++ + + F ++ G K
Sbjct: 178 ---SAYGSFT-SQSKEQYL--LPGESL---DLINESTNS-KANIKLVDFSIERESDGIPK 227
Query: 328 QFHSDLSLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAP 387
QF S L K KT VN P+R+ G+TIYQ DW+ S + VL+ D + L +
Sbjct: 228 QFISKLDFTSEDSKFNEVKTAKVNHPIRFKGLTIYQADWAISNI-VLEIDNILYQLQLKE 286
Query: 388 LKVNGDKKLFGTFLPLGDVNSPN 410
+ G+ +++G + LG N
Sbjct: 287 IPEIGN-QVWGILIELGSETKKN 308
>sp|Q7VA54|CCS1_PROMA Cytochrome c biogenesis protein CcsB OS=Prochlorococcus marinus
(strain SARG / CCMP1375 / SS120) GN=ccsB PE=3 SV=1
Length = 429
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 151/314 (48%), Gaps = 26/314 (8%)
Query: 98 RRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILT 157
R+++ LS+L +AI + IA ALGTA+ QGE + Y + Y E G +L
Sbjct: 5 RKIINWLSSLKVAIVLLILIALGSALGTALPQGEKAESYLKNY-EVTRFLGVINGDLLLQ 63
Query: 158 LGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRK----QEFS 213
L DH++SS FL LL + SL+ C++ Q P +K A W + I+K Q F
Sbjct: 64 LQLDHVYSSFWFLFLLTWLSFSLIICSWKRQWPSLKKAIDWIDYKEPKQIQKLAISQSFR 123
Query: 214 DTLPRASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSAT 273
I L L G++V +K L A KGL+GR P VH ++L++ G T
Sbjct: 124 IQKNDNGINPLANYLENNGWQVKIKSSRLAARKGLIGRVGPPLVHFGLILLIIGATY--- 180
Query: 274 GSFRGS-----VTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQ 328
G +G + + LN +L PNG V + F +D +G+ +Q
Sbjct: 181 GVLKGQRLEKFLAPERSLN-----LLSPNGI-------SKVSVKLTDFKIDRDPTGKPEQ 228
Query: 329 FHSDLSLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPL 388
F S L L + + + + ISVN PLR+ GIT+YQ DWS +A+ + N+ + +
Sbjct: 229 FRSKLELHNNNINKSIYEEISVNHPLRFQGITLYQADWSLAAITIQINNSPKIQFPLNKI 288
Query: 389 KVNGDKKLFGTFLP 402
GD +++G LP
Sbjct: 289 DELGD-QVWGIVLP 301
>sp|A2C6W3|CCS1_PROM3 Cytochrome c biogenesis protein CcsB OS=Prochlorococcus marinus
(strain MIT 9303) GN=ccsB PE=3 SV=1
Length = 432
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 146/278 (52%), Gaps = 15/278 (5%)
Query: 98 RRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILT 157
+R+LA +S+L +AIG + IA ALGTAI QGE+ D Y + Y D P GF IL
Sbjct: 5 KRLLAWISDLRIAIGLLFVIALSSALGTAIPQGELRDSYLEGY-SDKPWLGFVNGSMILR 63
Query: 158 LGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTL- 216
L DH+++S FL LL +GL+L+ C++ Q P ++ A +W + K ++T+
Sbjct: 64 LQLDHVYTSSWFLALLAWLGLALILCSWRRQWPALQAALQWIDYQEPRQLSKLAIAETIS 123
Query: 217 --PR-ASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSAT 273
P+ SI L L G++V + L A +G++GR P+ VHL ++L+M G +
Sbjct: 124 SPPKNESIDKLAAHLHQQGWQVQQQPGRLAARRGIIGRVGPMLVHLGLVLLMLGAVWGSL 183
Query: 274 GSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDL 333
G R + G + D+L +G ++ + F ++ +G +QF S L
Sbjct: 184 GGNRLEQFLAPGRSL---DLLNRDG-------NSHLKLTLTNFGIERDPAGRPEQFRSQL 233
Query: 334 SLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSAL 371
L + G +SVN PLR+ G+T+YQ DWS +A+
Sbjct: 234 ELLEPGQDTAKLHEVSVNHPLRFHGLTVYQADWSLAAI 271
>sp|A5GNE2|CCS1_SYNPW Cytochrome c biogenesis protein CcsB OS=Synechococcus sp. (strain
WH7803) GN=ccsB PE=3 SV=1
Length = 430
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 154/308 (50%), Gaps = 17/308 (5%)
Query: 99 RVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILTL 158
RV A LS+L LAI + IAA A+GT + Q E P+ Y +++ D P G +L
Sbjct: 6 RVFAILSDLRLAIALLLLIAAASAVGTILPQQEAPELYLERFNAD-PWLGLINGDQMLAF 64
Query: 159 GFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLPR 218
DH++SS FL LL +GL+LM C++ Q P ++ A RW + K ++TL
Sbjct: 65 QLDHLYSSVWFLALLAWLGLALMLCSWRRQWPALQAAMRWIDYTRPRQLSKLALAETLSC 124
Query: 219 AS----IQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATG 274
AS + L + L G++V L A +G+VGR P+ VH ++L++ G A
Sbjct: 125 ASSDGALSSLAIELKSRGWQVKQHQDRLAARRGVVGRVGPLLVHTGLVLLLIGAAWGALA 184
Query: 275 SFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLS 334
R + G + D+L P G A + + F + +G +QF S L+
Sbjct: 185 GQRLERFLAPGRSL---DLLDPAG-------ANRLSLTLENFSITRDPAGRAEQFQSTLT 234
Query: 335 LFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDK 394
L G+E R+TISVN PLRY G+T+YQ DWS +A+ V L ++ GD
Sbjct: 235 L-SPPGQEDERRTISVNHPLRYQGMTVYQADWSLAAVTVQIGKSPMLQLPLSTFPELGD- 292
Query: 395 KLFGTFLP 402
+++G LP
Sbjct: 293 QVWGLVLP 300
>sp|Q7V5R7|CCS1_PROMM Cytochrome c biogenesis protein CcsB OS=Prochlorococcus marinus
(strain MIT 9313) GN=ccsB PE=3 SV=1
Length = 430
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 146/278 (52%), Gaps = 15/278 (5%)
Query: 98 RRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILT 157
+R+LA +S+L +AIG + IA ALGTAI QGE+ + Y + Y D P GF IL
Sbjct: 5 KRLLAWISDLRIAIGLLLVIALASALGTAIPQGELRESYLEGY-SDKPWLGFVNGSMILR 63
Query: 158 LGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTL- 216
L DH+++S FL LL +GL+L+ C++ Q P ++ A +W + K ++T+
Sbjct: 64 LQLDHVYTSSWFLALLAWLGLALILCSWRRQWPALQAALQWIDYQEPRQLSKLAIAETIS 123
Query: 217 --PR-ASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSAT 273
P+ SI L L G++V + L A +G++GR P+ VHL ++L+M G +
Sbjct: 124 SPPKNESIDKLAAHLHQQGWQVQQQPGRLAARRGIIGRAGPMLVHLGLVLLMLGAVWGSL 183
Query: 274 GSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDL 333
G R + G + D+L +G ++ + F ++ +G +QF S L
Sbjct: 184 GGNRLEQFLAPGRSL---DLLNRDG-------NSHLKLTLTNFGIERDPAGRPEQFRSQL 233
Query: 334 SLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSAL 371
L + G +SVN PLR+ G+T+YQ DWS +A+
Sbjct: 234 ELLEPGQDTAKLHEVSVNHPLRFHGLTVYQADWSLAAI 271
>sp|Q7V028|CCS1_PROMP Cytochrome c biogenesis protein CcsB OS=Prochlorococcus marinus
subsp. pastoris (strain CCMP1986 / MED4) GN=ccsB PE=3
SV=1
Length = 428
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 142/295 (48%), Gaps = 21/295 (7%)
Query: 122 ALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILTLGFDHMFSSPIFLGLLVMMGLSLM 181
+GT I QG Y Y E P+ GF ++ L DH+++S FL L+++ +SL
Sbjct: 29 GVGTFIPQGNDQQEYIDFYNE-TPILGFINGSQVIRLQLDHIYTSNWFLFSLILLCISLA 87
Query: 182 ACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLPRASIQDLGVILMG------AGYEV 235
AC++ QIP +K A +W+ + K E IQD IL G+ +
Sbjct: 88 ACSFRRQIPSLKAALKWTDYKDEKKFYKLELITNY--EIIQDADHILKADSLLRKKGWNI 145
Query: 236 FLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFRGSVTVPQGLNFVVGDVLG 295
L A KGL G+ PI VH+ +++++ G SA G+F S + Q L LG
Sbjct: 146 SKFENRLSARKGLEGKLGPIIVHIGLIILLIG---SAYGNF-SSQSKEQYLR------LG 195
Query: 296 PNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSLFDIGGKEVMRKTISVNDPLR 355
+ L + ++ + F+++ G+ KQF S+L F KT VN P+R
Sbjct: 196 ESLDLINESTNSRVKIKLKNFFIERESDGKPKQFISNLEFFSKQQNLNEIKTTQVNQPIR 255
Query: 356 YGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKKLFGTFLPLGDVNSPN 410
+ G+TIYQ DWS S + V++ D + L + P+ GD +++G + LG N N
Sbjct: 256 FKGLTIYQADWSVSNI-VMEIDSVLYQLQLKPIPEIGD-QIWGLLIELGRENKKN 308
>sp|A8G6W0|CCS1_PROM2 Cytochrome c biogenesis protein CcsB OS=Prochlorococcus marinus
(strain MIT 9215) GN=ccsB PE=3 SV=1
Length = 428
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 157/321 (48%), Gaps = 25/321 (7%)
Query: 98 RRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILT 157
+ ++ +S+L AI + IA +GT I QG FY Y P+FGF +L
Sbjct: 5 KNLILKISSLRFAISLIIFIAITSGIGTFIPQGSDNKFYVDNY-NSAPIFGFLDGEKVLK 63
Query: 158 LGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLP 217
L DH+++S FL L+++ +SL AC++ QIP +K + +W S + K + + + P
Sbjct: 64 LQLDHVYTSFWFLFTLILLCISLAACSFRRQIPSLKASLKWIEYKSEKKFSKLQLNTSHP 123
Query: 218 RAS----IQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSAT 273
I + ++L G++ + + A +GL+G+ P+ VH+ +++++ G SA
Sbjct: 124 INQDGDHISKVDLLLKKRGWKTYKFKSHISARRGLIGKIGPLVVHIGLIILLIG---SAY 180
Query: 274 GSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVN--KFYMDYYDSGEVKQFHS 331
GSF L P L ++ +++ +V F ++ G KQF S
Sbjct: 181 GSFTSQSK---------EQYLLPGESLDLVNESTNSKANVKLVDFSIERESDGIPKQFIS 231
Query: 332 DLSLF--DIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLK 389
L+ + D+ E+ KT VN P+R G+TIYQ DW+ S + VL+ D + L + +
Sbjct: 232 KLNFYSEDLNLNEI--KTAKVNHPIRLKGLTIYQADWAISTV-VLEIDNILYQLQLKEIP 288
Query: 390 VNGDKKLFGTFLPLGDVNSPN 410
G+ +++G + LG N
Sbjct: 289 EIGN-QVWGVLVELGSETKNN 308
>sp|Q318T2|CCS1_PROM9 Cytochrome c biogenesis protein CcsB OS=Prochlorococcus marinus
(strain MIT 9312) GN=ccsB PE=3 SV=1
Length = 428
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 159/321 (49%), Gaps = 25/321 (7%)
Query: 98 RRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILT 157
+ ++ +S+L AI + IA +GT I QG FY + + P+FGF +L
Sbjct: 5 KNLILKISSLRFAISLIIFIAITSGIGTFIPQGNSNKFYIDNF-DSAPIFGFLDGEKVLK 63
Query: 158 LGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLP 217
L DH+++S FL L+++ +SL AC++ QIP +K + +W ++ + K + + + P
Sbjct: 64 LQLDHIYTSIWFLFTLILLCISLSACSFRRQIPSLKASLKWIEYNNEKKFSKLQLTSSHP 123
Query: 218 RAS----IQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSAT 273
I + ++L G++ + + A +GL+G+ P+ VH+ +++++ G SA
Sbjct: 124 INQDGDHISKVDLLLKKRGWKTYKFKSHISARRGLIGKIGPLVVHIGLIVLLLG---SAY 180
Query: 274 GSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVN--KFYMDYYDSGEVKQFHS 331
GSF L P L ++ +++ ++ F ++ G KQF S
Sbjct: 181 GSFTSQSN---------EQYLLPGESLDLVNESTNSKANIKLVNFSIERESDGIPKQFIS 231
Query: 332 DLSLF--DIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLK 389
L+ D+ E+ KT VN P+R+ G+TIYQ DW+ S + VL+ D + L + +
Sbjct: 232 KLNFSSEDLNINEI--KTAKVNHPIRFKGLTIYQADWAISNV-VLEIDNILYQLQLKEIP 288
Query: 390 VNGDKKLFGTFLPLGDVNSPN 410
G+ +++G + LG N
Sbjct: 289 EIGN-QVWGVLVELGSETKKN 308
>sp|Q0I7P7|CCS1_SYNS3 Cytochrome c biogenesis protein CcsB OS=Synechococcus sp. (strain
CC9311) GN=ccsB PE=3 SV=1
Length = 435
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 149/309 (48%), Gaps = 17/309 (5%)
Query: 98 RRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILT 157
RR+ A LS+L LAI + IA ALGT + Q E PD Y +++ D P G +L
Sbjct: 5 RRLFALLSDLRLAILLLLLIAGASALGTILPQNEAPDLYLERFNAD-PWLGMINGEQMLQ 63
Query: 158 LGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTL- 216
L D ++SS FL LL +GL+L+ C++ Q P + RW + K ++++
Sbjct: 64 LQLDSIYSSVWFLSLLAWLGLALILCSWRRQWPALLATTRWIDYRQPRQLSKLALAESIL 123
Query: 217 ---PRASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSAT 273
+++ L L G++V L A +G++G+ P+ VH ++L++ G A
Sbjct: 124 CSNGESALDTLSEELQKQGWQVQRNEDRLAARRGVIGKVGPLLVHTGLVLLLIGAAWGAL 183
Query: 274 GSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDL 333
R + G D+L P+G + S + + +F ++ +G +QF S L
Sbjct: 184 SGNRLERFLAPGRAL---DLLDPSG-----NNRLS--LTLERFAIERDPAGRTEQFRSTL 233
Query: 334 SLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGD 393
L GG R ISVN PLRY G+T+YQ DWS +A+ V L + G+
Sbjct: 234 RLDPPGGPSEQR-MISVNHPLRYRGMTVYQADWSLAAITVQIGKSPELQLPLRSFPELGE 292
Query: 394 KKLFGTFLP 402
+++G LP
Sbjct: 293 -QIWGLVLP 300
>sp|A2BT34|CCS1_PROMS Cytochrome c biogenesis protein CcsB OS=Prochlorococcus marinus
(strain AS9601) GN=ccsB PE=3 SV=1
Length = 428
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 154/317 (48%), Gaps = 17/317 (5%)
Query: 98 RRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILT 157
+ ++ +S+L AI + IA +GT I Q FY + + P+FG +L
Sbjct: 5 KNLILKISSLRFAISLIIFIAIASGIGTFIPQDNNNKFYIDNF-DRAPIFGLLDGEKVLK 63
Query: 158 LGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLP 217
L DH+++S FL L+++ +SL AC++ QIP +K + +W S + K + + + P
Sbjct: 64 LQLDHIYTSFWFLFTLILLCISLAACSFRRQIPSLKASLKWIEYKSEKKFSKLQLTRSHP 123
Query: 218 RAS----IQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSAT 273
I + ++L G++ + + A KGL+G+ P+ VH+ +++++ G SA
Sbjct: 124 INQDGEHISKVDLLLKKKGWKTYKFNSHISARKGLIGKIGPLVVHIGLIVLLIG---SAY 180
Query: 274 GSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDL 333
GSF S + Q L + G+ L L + V + F ++ G KQF S L
Sbjct: 181 GSFT-SQSKEQYL--LPGETLN----LVNESTNSRANVKLVDFSIERESDGVPKQFISKL 233
Query: 334 SLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGD 393
+ KT VN P+R+ G+TIYQ DW+ S + VL+ D + L + + G+
Sbjct: 234 NFSSENLNLNEIKTTKVNHPIRFKGLTIYQADWAISNI-VLEIDNILYQLQLKEIPEIGN 292
Query: 394 KKLFGTFLPLGDVNSPN 410
+++G + LG N
Sbjct: 293 -QVWGVLVELGSETKKN 308
>sp|Q7U8Y8|CCS1_SYNPX Cytochrome c biogenesis protein CcsB OS=Synechococcus sp. (strain
WH8102) GN=ccsB PE=3 SV=1
Length = 432
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 150/311 (48%), Gaps = 24/311 (7%)
Query: 98 RRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILT 157
+R+L LS+L +AI + IA A+GTAI QG+ P Y Y E P G +L
Sbjct: 2 KRLLVWLSDLRVAIVLLLLIALASAVGTAIPQGDPPTSYVDAYAE-TPWLGLLHGEQVLQ 60
Query: 158 LGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTL- 216
L DH++SS FLGLL +GL+L+ C++ Q P ++ ARRW + + K ++T+
Sbjct: 61 LQLDHVYSSGWFLGLLAWLGLALILCSWRRQWPALQAARRWIDYRTPRQLSKLAIAETIT 120
Query: 217 ---PRASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSAT 273
A + L +L G+E+ L A KG++GR P+ VH M+L+M G A
Sbjct: 121 CPDAEAGLTQLSAVLQRQGWELKPGLNRLAARKGVIGRVGPLLVHTGMVLLMLGAVWGAL 180
Query: 274 GSFRGSVTVPQGLNFVVGDVLGPNGFLS--TPTDAFSTEVHVNKFYMDYYDSGEVKQFHS 331
R + L P+ L +P + + F ++ +G +QF S
Sbjct: 181 AGNR------------LERFLAPDRTLDLLSPRGDSQLSITLQDFQIERDPAGRPEQFRS 228
Query: 332 DLSLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAMAPLKVN 391
L+L D E ISVN PLR+ GITIYQ DW+ +A+ V L +
Sbjct: 229 LLALSDSETPE----EISVNHPLRHRGITIYQADWALAAIGVQIGRSPELQLPLQTYPEL 284
Query: 392 GDKKLFGTFLP 402
GD +++G LP
Sbjct: 285 GD-QVWGLVLP 294
>sp|Q3AHI9|CCS1_SYNSC Cytochrome c biogenesis protein CcsB OS=Synechococcus sp. (strain
CC9605) GN=ccsB PE=3 SV=1
Length = 432
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 133/283 (46%), Gaps = 18/283 (6%)
Query: 124 GTAIEQGEVPDFYFQKYPEDNPVFGFFTWRWILTLGFDHMFSSPIFLGLLVMMGLSLMAC 183
GT I QG+ P Y Y D P G +L L DH++SS FL LL +GL+L+ C
Sbjct: 35 GTGIPQGDPPSSYIDAY-SDTPWLGLLHGEQVLQLQLDHVYSSGWFLALLAWLGLALILC 93
Query: 184 TYTTQIPLVKVARRWSFLHSAEAIRKQEFSDTLP----RASIQDLGVILMGAGYEVFLKG 239
++ Q P + ARRW + + K +++ P + L +L +G++V K
Sbjct: 94 SWRRQWPALMAARRWIDYRTTRQLSKLAIAESQPCPDTSQGLTQLETVLRASGWQVQRKP 153
Query: 240 PSLYAFKGLVGRFAPIGVHLAMLLIMAGGTLSATGSFRGSVTVPQGLNFVVGDVLGPNGF 299
L A +G +GR P+ VH ++L+M G A R + G + D+L +G
Sbjct: 154 QRLAARRGAIGRVGPLLVHTGLVLLMLGAAWGALAGNRLERFLAPGRSL---DLLDRDG- 209
Query: 300 LSTPTDAFSTEVHVNKFYMDYYDSGEVKQFHSDLSLFDIGGKEVMRKTISVNDPLRYGGI 359
+ +++F +D +G +QF S L L G + + ISVN PLR+ GI
Sbjct: 210 ------TSQLTITLDRFAIDRDPAGRTEQFRSALKLQ--GPNQSLDAEISVNHPLRHRGI 261
Query: 360 TIYQTDWSFSALQVLKNDEGPFNLAMAPLKVNGDKKLFGTFLP 402
T+YQ DWS + + + L + GD +++G LP
Sbjct: 262 TVYQADWSLATISLQIGRSPVLELPLQTYPELGD-QIWGLVLP 303
>sp|A5GV87|CCS1_SYNR3 Cytochrome c biogenesis protein CcsB OS=Synechococcus sp. (strain
RCC307) GN=ccsB PE=3 SV=1
Length = 434
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 138/283 (48%), Gaps = 15/283 (5%)
Query: 93 VKRLPRRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTW 152
+K L + A LS+L +AI + IAA LGTAI QGE FY ++Y + P G
Sbjct: 1 MKSLVLKAAAWLSDLRVAIVLLLLIAACSGLGTAIPQGEPAAFYHERY-DAAPWLGVVNG 59
Query: 153 RWILTLGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAIRKQEF 212
+L+ DH+++S FL LL +GL+L+ C+ Q P ++ + RW + K
Sbjct: 60 NQLLSWELDHLYTSNWFLLLLAWLGLALLLCSLRRQWPALRASLRWLDYTKPRQLSKLAV 119
Query: 213 SDTL----PRASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIMAGG 268
+ +L A++ L L G+ V + L A +G++GR P+ VH +++ M G
Sbjct: 120 ATSLDTGDSAAALDQLERQLQQQGWAVRRQQNRLAARRGVIGRVGPLLVHTGLIVFMVGA 179
Query: 269 TLSATGSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGEVKQ 328
+ A G R + G + ++L P G E+ ++ F + +G +Q
Sbjct: 180 VVGAFGGQRLERFLAPGRSL---ELLNPQG-------DTRLELQLDSFAIQRDPAGRPEQ 229
Query: 329 FHSDLSLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSAL 371
F S L L D G +SVN PLR+ GIT+YQ DW +A+
Sbjct: 230 FSSQLLLRDGTGAPAQPAAVSVNHPLRHRGITVYQADWGLAAV 272
>sp|P35161|RESB_BACSU Cytochrome c biogenesis protein ResB OS=Bacillus subtilis (strain
168) GN=resB PE=4 SV=1
Length = 542
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 129/309 (41%), Gaps = 42/309 (13%)
Query: 94 KRLPRRVLAALSNLPLAIGEMAAIAALMALGTAIEQ------GEVPDFYFQKYPEDNPVF 147
K + ++ S++ + I + A A GT Q G D Y Y E F
Sbjct: 50 KTIIDKIWNFFSSVKVGIWLIVITLAASAFGTIFPQEAYLPPGAQADTY---YKEQYGTF 106
Query: 148 GFFTWRWILTLGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSFLHSAEAI 207
G + LGF H++ S +L L+ +G+SL+ C+ IPL + + S +
Sbjct: 107 GQLYY----LLGFHHLYGSWWYLLLIASIGISLVICSLDRVIPLYRALKNQGVRRSPAFL 162
Query: 208 RKQE-FSDT---LPRASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLL 263
R+Q FS+T L S + + +L Y + K S+ A KG R+ P H+ +++
Sbjct: 163 RRQRLFSETVTVLNGESKEKIVTLLKKKHYRIREKEGSILAEKGRFSRWGPYVNHIGLII 222
Query: 264 IMAGGTLSATGSFRGSVTVPQGLNFVVGD---VLGPNGFLSTPTDAFSTEVH----VNKF 316
+ G L F + V + L G+ + G +G + FS E + K
Sbjct: 223 FLIGAML----RFVPGMYVDETLWVREGETAAIPGTDGKYYLKNNQFSVETYNSKTEKKV 278
Query: 317 YMDYYD---SGEV-KQFHSDLSLFDIGGK----------EVMRKTISVNDPLRYGGITIY 362
+ D D G V K F +D L+ GK +V + I VN PLR+ ++Y
Sbjct: 279 FADAIDRVGDGRVAKNFQTDAVLYKREGKIVYGEKPKLEKVTEEDIRVNQPLRFDSFSVY 338
Query: 363 QTDWSFSAL 371
Q D+ + L
Sbjct: 339 QVDYKENQL 347
>sp|O19913|CCS1_CYACA Cytochrome c biogenesis protein ccs1 OS=Cyanidium caldarium GN=ccs1
PE=3 SV=1
Length = 396
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 137/310 (44%), Gaps = 26/310 (8%)
Query: 95 RLPRRVLAALSNLPLAIGEMAAIAALMALGTAIEQGEVPDFYFQKYPEDNPVFGFFTWRW 154
R+ R L +NL +I I + A+GT I Q + +FY Y V G W+
Sbjct: 10 RIFRSCLNLATNLKFSITLFIIICIVSAIGTIIPQDKPKEFYMNTYSLK--VLGMPLWKI 67
Query: 155 ILTLGFDHMFSSPIFLGLLVMMGLSLMACTYTTQIPLVKVARRWSF---------LHSAE 205
I L + +F S +L LL+ + SL C+ +Q P ++ +R LH ++
Sbjct: 68 IQLLSLEKIFYSNFYLILLLCLSFSLFFCSLKSQFPYLRTSRIIKLNNNNPPTSPLHESK 127
Query: 206 AIRKQEFSDTLPRASIQDLGVILMGAGYEVFLKGPSLYAFKGLVGRFAPIGVHLAMLLIM 265
I+ + + +Q L+ GY++ Y F + + P+ +HL+++LI+
Sbjct: 128 KIKYNNIASKNDSSCVQ-----LVSQGYKI-------YTFDKNLDKAGPLLIHLSLILIL 175
Query: 266 AGGTLSATGSFRGSVTVPQGLNFVVGDVLGPNGFLSTPTDAFSTEVHVNKFYMDYYDSGE 325
G + A F +P + +V+ P + + + F +++ +
Sbjct: 176 LGSAIHAFNDFIAQEMIPIYEVSHIQNVISSGRISKIPQ---TISLKASAFTVEHENEKV 232
Query: 326 VKQFHSDLSLFDIGGKEVMRKTISVNDPLRYGGITIYQTDWSFSALQVLKNDEGPFNLAM 385
VKQF ++L++ + G+ + + +SVN PL Y + I+Q DW ++V + +
Sbjct: 233 VKQFITNLAMLNSKGEVLKQGLVSVNHPLVYKQVYIFQMDWKLFGIRVNYGKNKIYEFPV 292
Query: 386 APLKVNGDKK 395
++ N +++
Sbjct: 293 QKIEANNEQQ 302
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 162,729,255
Number of Sequences: 539616
Number of extensions: 7089401
Number of successful extensions: 15216
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 15058
Number of HSP's gapped (non-prelim): 75
length of query: 422
length of database: 191,569,459
effective HSP length: 120
effective length of query: 302
effective length of database: 126,815,539
effective search space: 38298292778
effective search space used: 38298292778
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)