BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014571
(422 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359485187|ref|XP_002279096.2| PREDICTED: putative methyltransferase NSUN6-like [Vitis vinifera]
Length = 590
Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust.
Identities = 279/376 (74%), Positives = 316/376 (84%), Gaps = 2/376 (0%)
Query: 1 MDLSGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDV 60
MD S RY Y+P+LRWNPQVE YF +AYG HFSRI++AL RPSCYSCIRVNTLK+T+D V
Sbjct: 26 MDPSDRYCYNPVLRWNPQVEAYFSKAYGPHHFSRITQALARPSCYSCIRVNTLKSTSDAV 85
Query: 61 IQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPD 120
I+KLLAIIQ + + S K L+ G+IS+ Q+PGL+YVVFV+GSGPHTI+YGYE D
Sbjct: 86 IEKLLAIIQET--ELGNTLDSQKKSLETGSISKCQLPGLDYVVFVRGSGPHTIEYGYEID 143
Query: 121 KPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGIT 180
+PPKEVIVSRKCAEAVLRGAQVYVPGV+ACSSHVEKGDVVAVSVAVEQP DGGWG+GIT
Sbjct: 144 RPPKEVIVSRKCAEAVLRGAQVYVPGVLACSSHVEKGDVVAVSVAVEQPGTDGGWGVGIT 203
Query: 181 RGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLE 240
RGTVLQG QTDPY+FER+ LYIGQG MMSRAGIFRAS GIAVDM+NR+F+LPSF+DVLE
Sbjct: 204 RGTVLQGQQTDPYHFERNALYIGQGATMMSRAGIFRASGGIAVDMNNRVFKLPSFHDVLE 263
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GEIFLQNLPSIVTAHALDPQ+ ERILDMCAAPGGKTTAIA L++D+GEV+AVDRSHNKVM
Sbjct: 264 GEIFLQNLPSIVTAHALDPQQDERILDMCAAPGGKTTAIAILMKDQGEVIAVDRSHNKVM 323
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEV 360
DIQKLAAEMGL CITTYKLDALKAV R NESND KD +T Q+SDS +L E
Sbjct: 324 DIQKLAAEMGLHCITTYKLDALKAVCRSNESNDMTTPSCRKDAEGVTLQSSDSPRLQMEK 383
Query: 361 PSIAAEGLNGDKSCKE 376
+ E D +C+E
Sbjct: 384 NQCSTEAFAADFACQE 399
>gi|302143528|emb|CBI22089.3| unnamed protein product [Vitis vinifera]
Length = 561
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 279/376 (74%), Positives = 318/376 (84%), Gaps = 6/376 (1%)
Query: 1 MDLSGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDV 60
MD S RY Y+P+LRWNPQVE YF +AYG HFSRI++AL RPSCYSCIRVNTLK+T+D V
Sbjct: 1 MDPSDRYCYNPVLRWNPQVEAYFSKAYGPHHFSRITQALARPSCYSCIRVNTLKSTSDAV 60
Query: 61 IQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPD 120
I+KLLAIIQ E ++ ++ K L+ G+IS+ Q+PGL+YVVFV+GSGPHTI+YGYE D
Sbjct: 61 IEKLLAIIQ-----ETELGNTKKS-LETGSISKCQLPGLDYVVFVRGSGPHTIEYGYEID 114
Query: 121 KPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGIT 180
+PPKEVIVSRKCAEAVLRGAQVYVPGV+ACSSHVEKGDVVAVSVAVEQP DGGWG+GIT
Sbjct: 115 RPPKEVIVSRKCAEAVLRGAQVYVPGVLACSSHVEKGDVVAVSVAVEQPGTDGGWGVGIT 174
Query: 181 RGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLE 240
RGTVLQG QTDPY+FER+ LYIGQG MMSRAGIFRAS GIAVDM+NR+F+LPSF+DVLE
Sbjct: 175 RGTVLQGQQTDPYHFERNALYIGQGATMMSRAGIFRASGGIAVDMNNRVFKLPSFHDVLE 234
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GEIFLQNLPSIVTAHALDPQ+ ERILDMCAAPGGKTTAIA L++D+GEV+AVDRSHNKVM
Sbjct: 235 GEIFLQNLPSIVTAHALDPQQDERILDMCAAPGGKTTAIAILMKDQGEVIAVDRSHNKVM 294
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEV 360
DIQKLAAEMGL CITTYKLDALKAV R NESND KD +T Q+SDS +L E
Sbjct: 295 DIQKLAAEMGLHCITTYKLDALKAVCRSNESNDMTTPSCRKDAEGVTLQSSDSPRLQMEK 354
Query: 361 PSIAAEGLNGDKSCKE 376
+ E D +C+E
Sbjct: 355 NQCSTEAFAADFACQE 370
>gi|449453870|ref|XP_004144679.1| PREDICTED: putative methyltransferase NSUN6-like [Cucumis sativus]
Length = 556
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 266/372 (71%), Positives = 302/372 (81%), Gaps = 4/372 (1%)
Query: 2 DLSGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVI 61
DL RYSY+P+L WNPQVEEYF++AYGA+HFS ISKALTRPSCYSCIRVNTLK+TTD VI
Sbjct: 7 DLPERYSYNPVLIWNPQVEEYFVKAYGAEHFSHISKALTRPSCYSCIRVNTLKSTTDTVI 66
Query: 62 QKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDK 121
+KL I++ G + V + Q+ +IS Q+PGL+YVVFV+GSGPHTIDYGY +
Sbjct: 67 EKLSTIVKEMGYEKKPVTE----KFQHPSISRCQVPGLDYVVFVRGSGPHTIDYGYANGR 122
Query: 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITR 181
PPKEVIVSRKCAEAVLRGAQVYVPGVMACS+HVEKGD VAVSVAVEQ +DGGW LGITR
Sbjct: 123 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSAHVEKGDAVAVSVAVEQRGVDGGWSLGITR 182
Query: 182 GTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEG 241
GTV+QG TDPY+ ER+GLYIGQGT MSRAGIFR S GIAVDM+NR+F+LPSFYDVLEG
Sbjct: 183 GTVVQGLPTDPYHSERNGLYIGQGTTAMSRAGIFRVSGGIAVDMNNRVFKLPSFYDVLEG 242
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMD 301
EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIA L++DEGEV+A DRSHNKVMD
Sbjct: 243 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNKVMD 302
Query: 302 IQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVP 361
IQKLAAEMGL CI TYKLDALK+V R +S N+ + + +S+SM L P
Sbjct: 303 IQKLAAEMGLSCIATYKLDALKSVNRNVDSCKGTASVCIDANDGVVNNSSNSMNLDNVEP 362
Query: 362 SIAAEGLNGDKS 373
S E DK+
Sbjct: 363 SSVTEVSEVDKT 374
>gi|449504229|ref|XP_004162289.1| PREDICTED: LOW QUALITY PROTEIN: putative methyltransferase
NSUN6-like [Cucumis sativus]
Length = 559
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 266/372 (71%), Positives = 303/372 (81%), Gaps = 1/372 (0%)
Query: 2 DLSGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVI 61
DL RYSY+P+L WNPQVEEYF++AYGA+HFS ISKALTRPSCYSCIRVNTLK+TTD VI
Sbjct: 7 DLPERYSYNPVLIWNPQVEEYFVKAYGAEHFSHISKALTRPSCYSCIRVNTLKSTTDTVI 66
Query: 62 QKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDK 121
+KL I++ G S ++ V + Q+ +IS Q+PGL+YVVFV+GSGPHTIDYGY +
Sbjct: 67 EKLSTIVKEMGCSNSE-NKPVTEKFQHPSISRCQVPGLDYVVFVRGSGPHTIDYGYANGR 125
Query: 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITR 181
PPKEVIVSRKCAEAVLRGAQVYVPGVMACS+HVEKGD VAVSVAVEQ +DGGW LGITR
Sbjct: 126 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSAHVEKGDAVAVSVAVEQRGVDGGWSLGITR 185
Query: 182 GTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEG 241
GTV+QG TDPY+ ER+GLYIGQGT MSRAG FR S GIAVDM+NR+F+LPSFYDVLEG
Sbjct: 186 GTVVQGLPTDPYHSERNGLYIGQGTTAMSRAGXFRVSGGIAVDMNNRVFKLPSFYDVLEG 245
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMD 301
EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIA L++DEGEV+A DRSHNKVMD
Sbjct: 246 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNKVMD 305
Query: 302 IQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVP 361
IQKLAAEMGL CI TYKLDALK+V R +S N+ + + +S+SM L P
Sbjct: 306 IQKLAAEMGLSCIATYKLDALKSVNRNVDSCKGTASVCIDANDGVVNNSSNSMNLDNVEP 365
Query: 362 SIAAEGLNGDKS 373
S E DK+
Sbjct: 366 SSVTEVSEVDKT 377
>gi|255574263|ref|XP_002528046.1| RNA binding protein, putative [Ricinus communis]
gi|223532576|gb|EEF34364.1| RNA binding protein, putative [Ricinus communis]
Length = 586
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 255/378 (67%), Positives = 305/378 (80%), Gaps = 14/378 (3%)
Query: 1 MDLSGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDV 60
MD S RY ++P L+WNPQVE+YF +AYG D+FSRIS ALTRP YSCIRVNTLKTT D V
Sbjct: 30 MDPSERYCFNPKLQWNPQVEDYFTKAYGPDYFSRISHALTRPPSYSCIRVNTLKTTADAV 89
Query: 61 IQKLLAIIQNSGSSEADVA--SSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYE 118
++KL+ ++ + + A + ++ RL I++ QIPGL+YV+FVKGSGPH IDYG+
Sbjct: 90 VEKLMEFVKETSFEDCSEAGRNDIEDRLCKSPITKCQIPGLDYVLFVKGSGPHMIDYGFS 149
Query: 119 PDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLG 178
P PPKEVIVSRKCAEAVLRGAQV+VPGVMACS+HVEKGD VAVSVA+EQ DGGW +G
Sbjct: 150 PGAPPKEVIVSRKCAEAVLRGAQVFVPGVMACSAHVEKGDAVAVSVAIEQHCPDGGWAIG 209
Query: 179 ITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV 238
+TRGTVLQG TDPYYF+R+GLYIGQG MSRAG+FR EGIAVDM NR+F+LPSF+DV
Sbjct: 210 MTRGTVLQGLPTDPYYFQRNGLYIGQGKTTMSRAGLFRVPEGIAVDMSNRVFKLPSFHDV 269
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
L+GEIFLQN PSI+TAHALDPQKGER+LDMCAAPGGKTTAIA L+++EGE++A DRSHNK
Sbjct: 270 LKGEIFLQNFPSIITAHALDPQKGERVLDMCAAPGGKTTAIAILMKNEGEIIACDRSHNK 329
Query: 299 VMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK 358
V+DIQKLAAEM L CITTYKLDALKAVRRK ES+ EP + S+S+++ +
Sbjct: 330 VLDIQKLAAEMSLTCITTYKLDALKAVRRKTESH-EP-----------VTVGSESLRVQE 377
Query: 359 EVPSIAAEGLNGDKSCKE 376
E PS A +GLN DK+C E
Sbjct: 378 EKPSSAVQGLNPDKACNE 395
>gi|356553761|ref|XP_003545221.1| PREDICTED: putative methyltransferase NSUN6-like [Glycine max]
Length = 571
Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust.
Identities = 247/366 (67%), Positives = 293/366 (80%), Gaps = 11/366 (3%)
Query: 2 DLSGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVI 61
D S RYSY+P+L WNPQV YF++AYGADHFSRIS ALTRPS YSCIRVNTL++T D VI
Sbjct: 5 DPSNRYSYTPILNWNPQVHHYFLKAYGADHFSRISTALTRPSRYSCIRVNTLRSTGDAVI 64
Query: 62 QKLLAIIQNS------GSSEADVASSVK--GRLQNGTISESQIPGLEYVVFVKGSGPHTI 113
KL +++ N+ S DVA+ +K IS+ +IPGL+YVVFV GSGP I
Sbjct: 65 HKLRSLVPNADVPPPQSDSGDDVANPLKECSAAAAAPISKCEIPGLDYVVFVWGSGPRRI 124
Query: 114 DYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDG 173
YG D PPKEVIVSRKCAEAVLRGAQVYVPGVMACS+HVEKGD VAVSVAVE+ DG
Sbjct: 125 HYG---DAPPKEVIVSRKCAEAVLRGAQVYVPGVMACSAHVEKGDTVAVSVAVEKQGADG 181
Query: 174 GWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLP 233
GWG+ +TRGTVLQGS+TDPYYFER+GLYIGQGTAM+SRAG+FR SEG+ VDM +R+++L
Sbjct: 182 GWGIAMTRGTVLQGSETDPYYFERNGLYIGQGTAMLSRAGMFRVSEGVGVDMKDRVYELH 241
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
SF++VLEGEIFLQNLPSI+ AHALDPQKGERILDMCAAPGGKTTAIA L++DEGE++A D
Sbjct: 242 SFHNVLEGEIFLQNLPSIIAAHALDPQKGERILDMCAAPGGKTTAIAILMKDEGEIIATD 301
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDS 353
RSHNKV+DIQKLAAEMGL CI T+KLDALK+V R+++ + + C + +T+Q DS
Sbjct: 302 RSHNKVLDIQKLAAEMGLSCIKTFKLDALKSVCRRDDIDTFTDPCCNNAKIDVTNQVLDS 361
Query: 354 MKLHKE 359
L E
Sbjct: 362 PNLQVE 367
>gi|297843456|ref|XP_002889609.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335451|gb|EFH65868.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 599
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/391 (62%), Positives = 298/391 (76%), Gaps = 10/391 (2%)
Query: 4 SGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQK 63
S RY Y P+LRWNPQVE+YF +AYG DHF+RISKALTRPS YSCIRVNT+KTT+D VI+K
Sbjct: 44 SERYCYDPVLRWNPQVEDYFTKAYGPDHFARISKALTRPSSYSCIRVNTVKTTSDAVIEK 103
Query: 64 LLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPP 123
L I+ +S V + I++ QIPGL+YVV V GSGPH I+Y + PP
Sbjct: 104 LTKILNDSEEGLKLVQPD-----GSSPIAKCQIPGLDYVVLVNGSGPHRIEYDSGLEIPP 158
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
KEV+VSRKCAEAVLRGAQVYVPGV+AC++HVEKGD VAV VA+EQP +G W + +TRGT
Sbjct: 159 KEVLVSRKCAEAVLRGAQVYVPGVLACTAHVEKGDAVAVCVAMEQPGDEGDWSVNMTRGT 218
Query: 184 VLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEI 243
LQG TDPYY ERSGLYIG GTAM+SRAG+FR GIAVD+ NR+F+LPS ++VLEGEI
Sbjct: 219 TLQGLSTDPYYRERSGLYIGMGTAMLSRAGMFRVPHGIAVDLSNRVFRLPSLHNVLEGEI 278
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
FLQNLPSI+ AHALDPQKGERILDMCAAPGGKTTAIA L+ DEGE+VA DRSHNKV+++Q
Sbjct: 279 FLQNLPSIIVAHALDPQKGERILDMCAAPGGKTTAIAILMNDEGEIVAADRSHNKVLNVQ 338
Query: 304 KLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSI 363
KL+AEMGL CITT KLDALK+V N ND + NS +N+ +TS + S + +E+ S+
Sbjct: 339 KLSAEMGLSCITTCKLDALKSVCIPNPPNDSTTIVNSDNNSSMTSHSELSSR--EEMTSL 396
Query: 364 AAEGLNGDKSCKEKG---RTCGECGMAQEEI 391
A+ DKS +E +T G ++Q +I
Sbjct: 397 ASRKSKADKSWEENASPEQTNGGNNVSQADI 427
>gi|42561755|ref|NP_172143.3| NOL1/NOP2/sun-like protein [Arabidopsis thaliana]
gi|30102680|gb|AAP21258.1| At1g06560 [Arabidopsis thaliana]
gi|110743735|dbj|BAE99704.1| hypothetical protein [Arabidopsis thaliana]
gi|332189884|gb|AEE28005.1| NOL1/NOP2/sun-like protein [Arabidopsis thaliana]
Length = 599
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/377 (61%), Positives = 288/377 (76%), Gaps = 7/377 (1%)
Query: 4 SGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQK 63
S RY Y P+LRWNP+VE+YF +AYG DHF+RISKALTRPS YSCIRVNT+KTT+D VI+K
Sbjct: 44 SERYCYDPVLRWNPEVEDYFTKAYGPDHFARISKALTRPSSYSCIRVNTVKTTSDAVIEK 103
Query: 64 LLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPP 123
L I+ +S V + +++ QIPGL+YVVFV GSGPH I+Y + PP
Sbjct: 104 LTKILNDSEEGLKLVQPD-----GSSPVTKCQIPGLDYVVFVNGSGPHKIEYDSGLENPP 158
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
KEV+VSRKCAEAVLRGAQVYVPGV+AC++HVEKGD VAV VA+EQP +G W + +TRGT
Sbjct: 159 KEVLVSRKCAEAVLRGAQVYVPGVLACTAHVEKGDAVAVCVAMEQPGDEGDWSVNMTRGT 218
Query: 184 VLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEI 243
LQG TDPYY ERSGLYIG GTAM+SRAG+FR GIAVD+++R+F+LPS +++LEGEI
Sbjct: 219 TLQGLPTDPYYRERSGLYIGMGTAMLSRAGMFRVPNGIAVDLNHRVFRLPSLHNILEGEI 278
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
FLQNLPSI+ AHALDPQKGERILDMCAAPGGKTTAIA L+ DEGE+VA DRSHNKV+ +Q
Sbjct: 279 FLQNLPSIIVAHALDPQKGERILDMCAAPGGKTTAIAILMNDEGEIVAADRSHNKVLVVQ 338
Query: 304 KLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSI 363
L+AEMG CITT KLDALK+V N+ + N +++ +TS + + ++E+ S+
Sbjct: 339 NLSAEMGFTCITTCKLDALKSVCLPTTLNESTILINGDNSSSMTSHS--ELSSNEEMTSV 396
Query: 364 AAEGLNGDKSCKEKGRT 380
+ DKSC++ T
Sbjct: 397 TSRRSEADKSCEKNDST 413
>gi|357494215|ref|XP_003617396.1| Ribosomal RNA small subunit methyltransferase B [Medicago
truncatula]
gi|355518731|gb|AET00355.1| Ribosomal RNA small subunit methyltransferase B [Medicago
truncatula]
Length = 572
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/366 (63%), Positives = 290/366 (79%), Gaps = 16/366 (4%)
Query: 4 SGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQK 63
S RYS++P L WNPQ+ YFI AYG+DHFSRIS ALTRPS YSCIRVNTL +T+D VI+K
Sbjct: 11 SQRYSFNPTLNWNPQLHNYFINAYGSDHFSRISSALTRPSRYSCIRVNTLCSTSDAVIEK 70
Query: 64 LLAIIQN--SGSSEADVASSVKGRLQNGTISES------QIPGLEYVVFVKGSGPHTIDY 115
L + ++ +GS DV +V L+ S+S +IPGL+YVVFV GSGPH +DY
Sbjct: 71 LRSTVKEKLNGSDCEDVDDAVN-PLKEDLDSDSSLLFKCKIPGLDYVVFVWGSGPHHVDY 129
Query: 116 GYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGW 175
G + PKEVIVSRKCAEAVLRGAQVYVPG+MACS+HVEKGD VAVSVA+EQ DGGW
Sbjct: 130 G---NVAPKEVIVSRKCAEAVLRGAQVYVPGIMACSAHVEKGDTVAVSVAIEQQGSDGGW 186
Query: 176 GLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSF 235
G+TRG VLQGS+TDPYY ER+GLYIGQGTAM+SRAG+FR +EG+ VDM +R+++L SF
Sbjct: 187 SSGMTRGIVLQGSETDPYYLERNGLYIGQGTAMLSRAGMFRVTEGLGVDMKDRVYELHSF 246
Query: 236 YDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRS 295
++VLEGEIFLQNLPSI+ AHALDPQ GERILDMCAAPGGKTTAIA L++D+GEV+A DRS
Sbjct: 247 HNVLEGEIFLQNLPSIIAAHALDPQMGERILDMCAAPGGKTTAIAILMKDKGEVIATDRS 306
Query: 296 HNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMK 355
HNKV+DI+KLAAE+GL CI +KLDALK+V ++N+ + C++ N + +Q S +++
Sbjct: 307 HNKVLDIEKLAAELGLSCIKAFKLDALKSVSQRNDI----DTCHNNATNDVKNQVSSNLQ 362
Query: 356 LHKEVP 361
+ + P
Sbjct: 363 VERMSP 368
>gi|226495531|ref|NP_001145845.1| hypothetical protein [Zea mays]
gi|219884681|gb|ACL52715.1| unknown [Zea mays]
gi|413920972|gb|AFW60904.1| hypothetical protein ZEAMMB73_425055 [Zea mays]
Length = 585
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/333 (67%), Positives = 266/333 (79%), Gaps = 7/333 (2%)
Query: 6 RYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLL 65
RY+YSP LRW P+VEEYF AYG DHF+RIS+AL PSCYSCIRVNTLK++TD V+ KLL
Sbjct: 19 RYTYSPRLRWQPEVEEYFNTAYGRDHFARISEALAHPSCYSCIRVNTLKSSTDAVMHKLL 78
Query: 66 AII-QNSGSSEADVASSVK----GRLQNGTISESQIP--GLEYVVFVKGSGPHTIDYGYE 118
++ +N S+ + V+ + Q G + P GLE V+FV+GSGPH + YG +
Sbjct: 79 DLVCKNELSAVINGLEVVELNGGDQSQEGCSLVHKCPYAGLENVLFVQGSGPHVLHYGSQ 138
Query: 119 PDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLG 178
PD+ KEV+VSRKCAE+VLRGAQVYVPGV+ACSSHVEKGD VAVSVA+EQP + GW +G
Sbjct: 139 PDQAVKEVVVSRKCAESVLRGAQVYVPGVLACSSHVEKGDKVAVSVAIEQPVKEDGWAVG 198
Query: 179 ITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV 238
ITRGTVLQG Q+D +Y ER GLYIGQGTA MSR+ IFR GIAV+M R+++LPSF DV
Sbjct: 199 ITRGTVLQGLQSDAHYEERKGLYIGQGTAAMSRSAIFRVPHGIAVEMTERVYKLPSFNDV 258
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
LEGEIFLQNLPS+VTA LDPQ GERILDMCAAPGGKTTAIA L+RDEGEVVA+DRSHNK
Sbjct: 259 LEGEIFLQNLPSVVTARVLDPQSGERILDMCAAPGGKTTAIAILMRDEGEVVALDRSHNK 318
Query: 299 VMDIQKLAAEMGLKCITTYKLDALKAVRRKNES 331
VMDI KLA+EM L CI YKLDALK+VR+ +E+
Sbjct: 319 VMDILKLASEMDLSCIKAYKLDALKSVRKTDEA 351
>gi|224082578|ref|XP_002306750.1| predicted protein [Populus trichocarpa]
gi|222856199|gb|EEE93746.1| predicted protein [Populus trichocarpa]
Length = 294
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/307 (71%), Positives = 252/307 (82%), Gaps = 24/307 (7%)
Query: 4 SGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQK 63
S RY +SP+LRWNP+VE YFI+AYGADHFS ISKALTRPS YSC+RVNTLK+T+D VI+K
Sbjct: 1 SDRYCFSPILRWNPEVENYFIKAYGADHFSIISKALTRPSSYSCVRVNTLKSTSDAVIEK 60
Query: 64 LLAIIQNSG-----------SSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHT 112
LL II+ G + +V S ++ L+NG I + QIPGLEYV+FVKG+GPH
Sbjct: 61 LLEIIKEKGFDGDCHGKEGSGTNENVGSPLEESLKNGPIVKCQIPGLEYVLFVKGTGPHM 120
Query: 113 IDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLD 172
IDYGY P PPKEVIVSRKCAEAVLRGAQV+VPGVMACS+HVEKGD VAVS A+EQ +
Sbjct: 121 IDYGYVPGAPPKEVIVSRKCAEAVLRGAQVFVPGVMACSAHVEKGDTVAVSAAIEQRNPN 180
Query: 173 GGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQL 232
GGW + DPYYFER+GLYIGQGTA MSRAG+FRAS+GIAVDM+NR+F+L
Sbjct: 181 GGWAI-------------DPYYFERNGLYIGQGTATMSRAGLFRASKGIAVDMNNRVFRL 227
Query: 233 PSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAV 292
PSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIA L++DEGE+VA+
Sbjct: 228 PSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIAILMKDEGELVAL 287
Query: 293 DRSHNKV 299
DRSHNKV
Sbjct: 288 DRSHNKV 294
>gi|115476098|ref|NP_001061645.1| Os08g0365900 [Oryza sativa Japonica Group]
gi|38636850|dbj|BAD03090.1| putative nucleolar protein [Oryza sativa Japonica Group]
gi|113623614|dbj|BAF23559.1| Os08g0365900 [Oryza sativa Japonica Group]
gi|215717005|dbj|BAG95368.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640447|gb|EEE68579.1| hypothetical protein OsJ_27075 [Oryza sativa Japonica Group]
Length = 589
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/333 (64%), Positives = 261/333 (78%), Gaps = 7/333 (2%)
Query: 6 RYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLL 65
RY+YSP LRW P+VEEYF AYG D F+RIS+AL PSCYSCIRVNTLK++TD V+ KL+
Sbjct: 21 RYTYSPRLRWQPEVEEYFAAAYGRDRFARISEALAHPSCYSCIRVNTLKSSTDAVMHKLM 80
Query: 66 AII-QNS---GSSEADVASSVKGRLQ---NGTISESQIPGLEYVVFVKGSGPHTIDYGYE 118
++ QN G + ++ G N + + GL+ V+FV+GSGPH + Y +
Sbjct: 81 NLVDQNGLCGGINGLEIGQQNGGEQAHEGNSVVHKCPYSGLDNVLFVQGSGPHALHYNSQ 140
Query: 119 PDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLG 178
PD+ KEVIVSRKCAE+VLRGAQVY+PGV+ACSSHVEKGD VAVSVA+EQP DGGW +G
Sbjct: 141 PDQSIKEVIVSRKCAESVLRGAQVYIPGVLACSSHVEKGDKVAVSVAIEQPAEDGGWTVG 200
Query: 179 ITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV 238
ITRGTVLQG Q+D ++ ER GLYIGQG MSR+GIFR G+AV+M R+++LPSF DV
Sbjct: 201 ITRGTVLQGLQSDAHHEERKGLYIGQGITAMSRSGIFRVPHGVAVEMTERVYKLPSFNDV 260
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
LEGEIFLQNLPS+V A LDPQ GERILDMCAAPGGKTTAIA L++D+GE++A+DRSHNK
Sbjct: 261 LEGEIFLQNLPSVVAARVLDPQPGERILDMCAAPGGKTTAIAILMKDQGEIIALDRSHNK 320
Query: 299 VMDIQKLAAEMGLKCITTYKLDALKAVRRKNES 331
VMDI KLAAEM L CI YKLDALK+VR+ NE+
Sbjct: 321 VMDILKLAAEMDLNCIKAYKLDALKSVRKTNEA 353
>gi|242078877|ref|XP_002444207.1| hypothetical protein SORBIDRAFT_07g014990 [Sorghum bicolor]
gi|241940557|gb|EES13702.1| hypothetical protein SORBIDRAFT_07g014990 [Sorghum bicolor]
Length = 585
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/342 (63%), Positives = 265/342 (77%), Gaps = 17/342 (4%)
Query: 4 SGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQK 63
+GRY+YSP LRW P+VEEYF AYG DHF+RIS+AL PSCYSCIRVNTLK++TD V+ K
Sbjct: 17 AGRYTYSPRLRWQPEVEEYFAAAYGRDHFARISEALAHPSCYSCIRVNTLKSSTDAVMHK 76
Query: 64 LLAIIQNSGSSEADVASSVKG----RLQNGT--------ISESQIPGLEYVVFVKGSGPH 111
L+ ++ E ++++++ G L G + + GLE V+FV+GSGPH
Sbjct: 77 LMDLV-----CENELSAAINGVEAVELNGGEQPHEGSSLVHKCPYAGLENVLFVQGSGPH 131
Query: 112 TIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTL 171
+ YG +PD+ KEV+VSRKCAE+VLRGAQVYVPGV+ACSSHVEKGD VAVSVA+EQP
Sbjct: 132 VLYYGSQPDQAVKEVVVSRKCAESVLRGAQVYVPGVLACSSHVEKGDKVAVSVAIEQPVK 191
Query: 172 DGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQ 231
+ GW +GITRGTVLQG Q+D +Y ER+GLYIGQGTA MSR+ +FR GIAV+M +
Sbjct: 192 EDGWAVGITRGTVLQGLQSDAHYEERTGLYIGQGTAAMSRSALFRVPHGIAVEMTETTQK 251
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
P + DVLEGEIFLQNLPS+VT H +DPQ GERILDMCAAPGGKTTAIA L+RD+GEVVA
Sbjct: 252 APMYNDVLEGEIFLQNLPSVVTTHFIDPQSGERILDMCAAPGGKTTAIAILMRDKGEVVA 311
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
+DRSHNKVMDI KLA+EM L CI YKLDALK+VR+ +ES +
Sbjct: 312 LDRSHNKVMDILKLASEMDLSCIKAYKLDALKSVRKTDESRN 353
>gi|357145794|ref|XP_003573768.1| PREDICTED: putative methyltransferase NSUN6-like [Brachypodium
distachyon]
Length = 590
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/335 (64%), Positives = 260/335 (77%), Gaps = 7/335 (2%)
Query: 6 RYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLL 65
RY++SP LRW P+VEEY + AYG DHF+RIS+AL PSCYSCIRVNTLK++TD V QKLL
Sbjct: 20 RYTFSPSLRWQPEVEEYLVSAYGRDHFARISEALATPSCYSCIRVNTLKSSTDAVRQKLL 79
Query: 66 AIIQNS----GSSEADVASSVKG-RLQNGTISESQIP--GLEYVVFVKGSGPHTIDYGYE 118
++ G + ++ G + G+ + P GLE V+FV+GSGPH + Y +
Sbjct: 80 TLVNQKELCGGINGLGISERNGGEQAHEGSYLVHKCPYSGLENVLFVRGSGPHVLHYNGQ 139
Query: 119 PDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLG 178
P + KE+IVSRKCAE+VLRGAQVYVPGV+ACSSHVEKGD VAVSVA+EQP D GW +G
Sbjct: 140 PGQSIKEIIVSRKCAESVLRGAQVYVPGVLACSSHVEKGDKVAVSVAIEQPVKDSGWAVG 199
Query: 179 ITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV 238
ITRGTVLQG Q+D +Y ER GLYIGQG A MSR GIFR G+AV+M R+++LPSF DV
Sbjct: 200 ITRGTVLQGLQSDAHYEERKGLYIGQGIAAMSRTGIFRVLHGVAVEMTERVYKLPSFNDV 259
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
LEG+IFLQNLPSIV A LDPQ GE+ILDMCAAPGGKTTAIA L+RD+GE+VA+DRSHNK
Sbjct: 260 LEGDIFLQNLPSIVAARVLDPQPGEQILDMCAAPGGKTTAIAILMRDKGEIVALDRSHNK 319
Query: 299 VMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
VM I KLA EMGL CI YKLDALK+VR+ NE+ +
Sbjct: 320 VMGILKLADEMGLSCIKAYKLDALKSVRKTNEARN 354
>gi|6692691|gb|AAF24825.1|AC007592_18 F12K11.11 [Arabidopsis thaliana]
Length = 301
Score = 343 bits (880), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 165/259 (63%), Positives = 202/259 (77%), Gaps = 10/259 (3%)
Query: 4 SGRYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQK 63
S RY Y P+LRWNP+VE+YF +AYG DHF+RISKALTRPS YSCIRVNT+KTT+D VI+K
Sbjct: 44 SERYCYDPVLRWNPEVEDYFTKAYGPDHFARISKALTRPSSYSCIRVNTVKTTSDAVIEK 103
Query: 64 LLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPP 123
L I+ +S V + +++ QIPGL+YVVFV GSGPH I+Y + PP
Sbjct: 104 LTKILNDSEEGLKLVQPD-----GSSPVTKCQIPGLDYVVFVNGSGPHKIEYDSGLENPP 158
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
KEV+VSRKCAEAVLRGAQVYVPGV+AC++HVEKGD VAV VA+EQP +G W + +TRGT
Sbjct: 159 KEVLVSRKCAEAVLRGAQVYVPGVLACTAHVEKGDAVAVCVAMEQPGDEGDWSVNMTRGT 218
Query: 184 VLQG-----SQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV 238
LQG +Q PYY ERSGLYIG GTAM+SRAG+FR GIAVD+++R+F+LPS +++
Sbjct: 219 TLQGLPTGKNQKYPYYRERSGLYIGMGTAMLSRAGMFRVPNGIAVDLNHRVFRLPSLHNI 278
Query: 239 LEGEIFLQNLPSIVTAHAL 257
LEGEIFLQNLPSI+ AHAL
Sbjct: 279 LEGEIFLQNLPSIIVAHAL 297
>gi|168034692|ref|XP_001769846.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678955|gb|EDQ65408.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 557
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 179/338 (52%), Positives = 235/338 (69%), Gaps = 19/338 (5%)
Query: 9 YSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAII 68
Y P L W+P+V +Y +AYG HF++IS+ALTRPS YSC+RVNTL+TTT +VI++L +
Sbjct: 1 YRPRLIWDPRVSDYLSQAYGQQHFAQISEALTRPSVYSCVRVNTLQTTTKEVIKQLTRYV 60
Query: 69 ---QNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPP-- 123
QN E + + S Q+ L+ VV VKG GP +IDY +
Sbjct: 61 LQQQNDNQKEDEGSESCGICFQHDV--------LDNVVMVKGKGPCSIDYTTVRGEGGVL 112
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
KEV+VSRKCAEAVLRGA V+VPGV+ACS +EK ++VAVSVA+E+ +GGW +G+TRGT
Sbjct: 113 KEVVVSRKCAEAVLRGAHVFVPGVLACSGCIEKDELVAVSVAMERSDGEGGWFVGVTRGT 172
Query: 184 VLQGSQTDPYYFE--RSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEG 241
L + + RSG +IG G AMM+RA +FR ++G+AV+M +R + LP F VL G
Sbjct: 173 TLSSEHAKSQFNDEDRSGWFIGIGRAMMTRATLFREAKGVAVEMVHRAYNLPPFSGVLSG 232
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMD 301
+IFLQNLPS+V H LDPQ GERILDMCAAPGGKTT IA+L+ D+GEV+A+DRSH+KV+D
Sbjct: 233 DIFLQNLPSVVATHVLDPQPGERILDMCAAPGGKTTGIATLMGDKGEVIALDRSHSKVLD 292
Query: 302 IQKLAAEMGLKCITTYKLDALKAVRRKNE----SNDEP 335
I +LA EM L CI K+DALK+VR ++ S D+P
Sbjct: 293 IVRLAQEMKLTCIQAIKMDALKSVRVESTPDRISQDKP 330
>gi|302819862|ref|XP_002991600.1| hypothetical protein SELMODRAFT_133737 [Selaginella moellendorffii]
gi|300140633|gb|EFJ07354.1| hypothetical protein SELMODRAFT_133737 [Selaginella moellendorffii]
Length = 551
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 174/324 (53%), Positives = 217/324 (66%), Gaps = 26/324 (8%)
Query: 6 RYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLL 65
+ Y P L WNP V EY AYG DHFSRI ALTRPS Y C+RVN ++T+T VI +L
Sbjct: 4 KLGYRPALLWNPAVYEYLREAYGPDHFSRICDALTRPSTYCCVRVNAMQTSTAAVIAELK 63
Query: 66 AIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKE 125
+ S EA+ GT P L+ VV V G GP + Y D+ K
Sbjct: 64 EFLS---SKEAE-----------GTTCYEH-PLLKNVVIVPGRGPCDVSYD---DEVQKI 105
Query: 126 VIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVL 185
V+VSRKCAEAVLRGA+V+VPGV+ACS HV++GD VAV +E G W G+TRGT +
Sbjct: 106 VMVSRKCAEAVLRGAEVFVPGVLACSEHVDEGDSVAVFARIEVKDSAGKWSNGVTRGTTI 165
Query: 186 QGSQTD---PYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGE 242
S + PY + +IG+G AMMSR +FR +GIAV M +RI+ LP+F+ +LEG
Sbjct: 166 PLSDWESCSPYDW-----FIGKGRAMMSRPTLFRERQGIAVKMTDRIYNLPAFHGILEGR 220
Query: 243 IFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDI 302
+FLQNLPSIVTA LDPQ GERILDMCAAPGGKTTAIASL+ + GEV+A+DR+HNKV++I
Sbjct: 221 VFLQNLPSIVTAIVLDPQPGERILDMCAAPGGKTTAIASLMNNTGEVIALDRTHNKVLEI 280
Query: 303 QKLAAEMGLKCITTYKLDALKAVR 326
LA E+GL CI +KLDALK+V+
Sbjct: 281 LSLAKELGLSCIQAFKLDALKSVQ 304
>gi|218201053|gb|EEC83480.1| hypothetical protein OsI_28995 [Oryza sativa Indica Group]
Length = 293
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/237 (59%), Positives = 177/237 (74%), Gaps = 7/237 (2%)
Query: 6 RYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLL 65
RY+YSP LRW P+VEEYF AYG D F+RIS+AL PSCYSCIRVNTLK++TD V+ KL+
Sbjct: 21 RYTYSPRLRWQPEVEEYFAAAYGRDRFARISEALAHPSCYSCIRVNTLKSSTDAVMHKLM 80
Query: 66 AII-QNS---GSSEADVASSVKGRLQ---NGTISESQIPGLEYVVFVKGSGPHTIDYGYE 118
++ QN G + ++ G N + + GL+ V+FV+GSGPH + Y +
Sbjct: 81 NLVDQNGLCGGINGLEIGQQNGGEQAHEGNSVVHKCPYSGLDNVLFVQGSGPHALHYDSQ 140
Query: 119 PDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLG 178
PD+ KEVIVSRKCAE+VLRGAQVY+PGV+ACSSHVEKGD VAVSVA+EQP DGGW +G
Sbjct: 141 PDQSIKEVIVSRKCAESVLRGAQVYIPGVLACSSHVEKGDKVAVSVAIEQPAEDGGWTVG 200
Query: 179 ITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSF 235
ITRGTVLQG Q+D ++ ER GLYIGQG MSR+GIFR G+AV+M R+++LPSF
Sbjct: 201 ITRGTVLQGLQSDAHHEERKGLYIGQGITAMSRSGIFRVPHGVAVEMTERVYKLPSF 257
>gi|413920973|gb|AFW60905.1| hypothetical protein ZEAMMB73_425055 [Zea mays]
Length = 263
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 147/248 (59%), Positives = 181/248 (72%), Gaps = 15/248 (6%)
Query: 6 RYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLL 65
RY+YSP LRW P+VEEYF AYG DHF+RIS+AL PSCYSCIRVNTLK++TD V+ KLL
Sbjct: 19 RYTYSPRLRWQPEVEEYFNTAYGRDHFARISEALAHPSCYSCIRVNTLKSSTDAVMHKLL 78
Query: 66 AII-QNSGSSEADVASSVK----GRLQNGTISESQIP--GLEYVVFVKGSGPHTIDYGYE 118
++ +N S+ + V+ + Q G + P GLE V+FV+GSGPH + YG +
Sbjct: 79 DLVCKNELSAVINGLEVVELNGGDQSQEGCSLVHKCPYAGLENVLFVQGSGPHVLHYGSQ 138
Query: 119 PDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLG 178
PD+ KEV+VSRKCAE+VLRGAQVYVPGV+ACSSHVEKGD VAVSVA+EQP + GW +G
Sbjct: 139 PDQAVKEVVVSRKCAESVLRGAQVYVPGVLACSSHVEKGDKVAVSVAIEQPVKEDGWAVG 198
Query: 179 ITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV 238
ITRGTVLQG Q+D +Y ER GLYIGQGTA MSR+ IFR GIAV+M R+
Sbjct: 199 ITRGTVLQGLQSDAHYEERKGLYIGQGTAAMSRSAIFRVPHGIAVEMTERM--------C 250
Query: 239 LEGEIFLQ 246
L+G+ F +
Sbjct: 251 LKGKYFFR 258
>gi|302776778|ref|XP_002971535.1| hypothetical protein SELMODRAFT_412312 [Selaginella moellendorffii]
gi|300160667|gb|EFJ27284.1| hypothetical protein SELMODRAFT_412312 [Selaginella moellendorffii]
Length = 422
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 159/327 (48%), Positives = 198/327 (60%), Gaps = 48/327 (14%)
Query: 6 RYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLL 65
+ Y P L WNP V EY AYGADHFSRI ALTRPS Y C+R N ++T+T VI +L
Sbjct: 4 KLGYRPALLWNPAVYEYLREAYGADHFSRICDALTRPSTYCCVRANAMQTSTAAVIAELK 63
Query: 66 AIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKE 125
+ S EA+ GT P L+ VV V G GP DK
Sbjct: 64 EFLS---SKEAE-----------GTTCYEH-PLLKNVVIVPGRGPC--------DK---- 96
Query: 126 VIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVL 185
V CA + GV+ACS HV++GD VAV +E G W G+TRGT +
Sbjct: 97 --VCGSCAP--------WCRGVLACSEHVDEGDSVAVFARIEVKDSAGKWSNGVTRGTTI 146
Query: 186 QGSQTD------PYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVL 239
S + PY + +IG+G AMMSR +FR +GIAV M +RI+ LP+F+ +L
Sbjct: 147 PLSDWESSLGGSPYDW-----FIGKGRAMMSRPTLFRERQGIAVKMTDRIYNLPAFHGIL 201
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +FLQNLPSIVTA LDPQ GERILDMCAAPGGKTTAIASL+ + GEV+A+DR+HNKV
Sbjct: 202 EGGVFLQNLPSIVTAIVLDPQPGERILDMCAAPGGKTTAIASLMNNTGEVIALDRTHNKV 261
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVR 326
++I LA E+GL CI +KLDALK+V+
Sbjct: 262 LEILSLAKELGLSCIQAFKLDALKSVQ 288
>gi|307111656|gb|EFN59890.1| hypothetical protein CHLNCDRAFT_132901 [Chlorella variabilis]
Length = 585
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 193/326 (59%), Gaps = 27/326 (8%)
Query: 8 SYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAI 67
+Y+P + W+ +V +Y A G + IS AL RP +C+RVNTL+T+ D++++L
Sbjct: 5 TYAPEISWDSEVRQYLEAALGPQKLAEISAALARPPLATCLRVNTLRTSPQDLLRRL--- 61
Query: 68 IQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVI 127
EA +A + L+ T P L V + G+GPH +DY EV+
Sbjct: 62 ------PEA-LAPEDRALLE--TNPAYVHPLLPDAVILPGTGPHAVDYSRTRGL---EVV 109
Query: 128 VSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQG 187
V RK E+V+RGA V+ PG++A S +EKGD+VAVSV +E P D TRGTVL G
Sbjct: 110 VGRKAGESVMRGAHVFAPGMLAVSPGIEKGDLVAVSVGLELPGSDR---YAYTRGTVL-G 165
Query: 188 SQTDPYYFE--------RSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVL 239
S+ + E RS L+IG G A +SR F+ GIAV M R+F+ P D+L
Sbjct: 166 SEHEAKQVEALGGQAPDRSRLFIGIGRAELSRTEFFQGRGGIAVTMLERVFRTPGCGDIL 225
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
G+ LQN+ S+V AH L P+ G R+LDMCAAPGGKTTA+A L+ D GEVVA DRSH K
Sbjct: 226 PGDFMLQNVCSLVAAHVLAPRPGARVLDMCAAPGGKTTALAQLMGDRGEVVAFDRSHAKA 285
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAV 325
++++LA GL C+ YK+DA KAV
Sbjct: 286 AEVRRLAGSFGLTCVKAYKMDATKAV 311
>gi|348679072|gb|EGZ18889.1| hypothetical protein PHYSODRAFT_315386 [Phytophthora sojae]
Length = 501
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 172/314 (54%), Gaps = 25/314 (7%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
QVE+ AY H++ I AL RP ++ +RVNTLK + D+ +Q L + + A
Sbjct: 26 QVEQELGAAYSEPHWTNIKHALARPPAFTAVRVNTLKLSRDEALQALKPHLDGFNAQLAA 85
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVL 137
+ +S R + + +P + ++ SG +D+ E K ++V R C EAVL
Sbjct: 86 LDAS---RQPIEAFAHASLPDV-LMIPSAASGDTAVDFNPEL----KSIVVDRLCGEAVL 137
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFER 197
RG+ ++ GVM+ SS + D V V V ++ TRG+ D +
Sbjct: 138 RGSDIFARGVMSASSGINAEDEVNVFVDLDH---------NHTRGS-------DFAAHDG 181
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIAVDMHNRI-FQLPSFYDVLEGEIFLQNLPSIVTAHA 256
L I +G M+R IFRA G+AV R+ P VL G+I++QNLP V AHA
Sbjct: 182 RKLLIARGVTKMARTEIFRAVRGLAVTQLVRVCHDAPPMNGVLHGQIYVQNLPCSVVAHA 241
Query: 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
LDPQ+G+ ILDMCAAPGGKT+ +A+L+R++G +VA DRS K ++++ L ++ L+C+
Sbjct: 242 LDPQEGDAILDMCAAPGGKTSHVATLMRNKGTLVACDRSKRKALELRTLCDDLQLECVVP 301
Query: 317 YKLDALKAVRRKNE 330
K+D+ AV K++
Sbjct: 302 LKMDSTHAVLPKDK 315
>gi|348679063|gb|EGZ18880.1| hypothetical protein PHYSODRAFT_499736 [Phytophthora sojae]
Length = 501
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 172/314 (54%), Gaps = 25/314 (7%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
QVE+ AY H++ I AL RP ++ +RVNTLK + D+ +Q L + + A
Sbjct: 26 QVEQELGAAYSEPHWTNIKHALARPPAFTAVRVNTLKLSRDEALQALKPHLDGFNAQLAA 85
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVL 137
+ +S R + + +P + ++ SG +D+ E K ++V R C EAVL
Sbjct: 86 LDAS---RQPIEAFAHASLPDV-LMIPSAASGDTAVDFNPEL----KSIVVDRLCGEAVL 137
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFER 197
RG+ ++ GVM+ SS + D V V V ++ TRG+ D +
Sbjct: 138 RGSDIFARGVMSASSGINAEDEVNVFVDLDH---------NHTRGS-------DFAAHDG 181
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIAVDMHNRI-FQLPSFYDVLEGEIFLQNLPSIVTAHA 256
L I +G M+R IFRA G+AV R+ P VL G+I++QNLP V AHA
Sbjct: 182 RKLLIARGVTKMARTEIFRAVRGLAVTQLVRVCHDAPPMNGVLHGQIYVQNLPCSVVAHA 241
Query: 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
LDPQ+G+ ILDMCAAPGGKT+ +A+L+R++G +VA DRS K ++++ L ++ L+C+
Sbjct: 242 LDPQEGDAILDMCAAPGGKTSHVATLMRNKGTLVACDRSKRKALELRTLCDDLQLECVVP 301
Query: 317 YKLDALKAVRRKNE 330
K+D+ AV K++
Sbjct: 302 LKMDSTHAVLPKDK 315
>gi|301097830|ref|XP_002898009.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106454|gb|EEY64506.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 497
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 171/319 (53%), Gaps = 25/319 (7%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
QVE+ AYG H++ I +AL RP ++ +RVNTLK + D+ +Q L + + A
Sbjct: 26 QVEQELGAAYGEPHWTNIKRALARPPAFTAVRVNTLKLSRDEALQALKPHLDGFNAQLAA 85
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVL 137
+ +S R ++ + +P V+ + S Y P+ K ++V R C EAVL
Sbjct: 86 LDAS---RQPIEALAHASLPD---VLMIPSSPSGQASVQYNPEF--KSIVVDRLCGEAVL 137
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFER 197
RG+ ++ GVM+ S+ + D V V V ++ TRG+ D
Sbjct: 138 RGSDIFARGVMSASAGINAEDDVNVFVDLDH---------NHTRGS-------DFATHNG 181
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIF-QLPSFYDVLEGEIFLQNLPSIVTAHA 256
L I G M+R IFRA G+AV R+ P VL G+I++QNLP V AH
Sbjct: 182 RKLLIAHGVTKMARTEIFRAVRGLAVTQLVRVCPDAPPMNGVLRGQIYVQNLPCSVVAHV 241
Query: 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
LDPQ+G+ ILDMCAAPGGKT+ +A+L+R+ G +VA DRS K ++++ L ++ L+C+
Sbjct: 242 LDPQQGDVILDMCAAPGGKTSHVATLMRNTGTLVACDRSKRKALELRTLCEDLHLECVEP 301
Query: 317 YKLDALKAVRRKNESNDEP 335
K+D+ A+ K++ + P
Sbjct: 302 LKMDSTHALLPKDKVDAAP 320
>gi|449270283|gb|EMC80975.1| Putative methyltransferase NSUN6 [Columba livia]
Length = 469
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 181/347 (52%), Gaps = 56/347 (16%)
Query: 8 SYSPLLRWNPQVEEYFIRAYGADH-------------FSRISKALTRPSCYSCIRVNTLK 54
S+ P + + +VEEY + + + + + L+ P ++ +RVNT
Sbjct: 2 SFFPKISFQCEVEEYLTKVFRNNELVTALGTQEAECKYQSLLSRLSHPPSFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ +V + L IQ + + + + P L ++ + GP
Sbjct: 62 ASVKNVKKLLFEEIQK--------------QFKGLCVPVLEHPKLHDILLIPVIGPRR-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
+ K EVIV +C AVLRGA VYVPG+++ S ++ GD+V+V +E
Sbjct: 106 ---DLKKHASEVIVGAQCGYAVLRGAHVYVPGIISASRFMKAGDLVSVYSDIE------- 155
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
G +G++ FE +++G G + +SR+ IF +S G+ V M ++
Sbjct: 156 -------GKCKRGAKE----FEGVKVFLGNGISELSRSEIFSSSCPLNGMGVKMIEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF +VL +FLQNLPS+V +H L+PQ GERILDMCAAPGGKTT +A+L+ D+GEV+A
Sbjct: 205 SPSFDNVLPSNLFLQNLPSVVVSHILNPQPGERILDMCAAPGGKTTHLAALMHDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV---RRKNESNDEP 335
+D++ NKV I++ A + L CI T+ D KA+ +R++E + P
Sbjct: 265 MDKTANKVKKIKQNAELLQLNCIKTFCYDGTKALSVEKREDEQDGPP 311
>gi|326921692|ref|XP_003207090.1| PREDICTED: putative methyltransferase NSUN6-like [Meleagris
gallopavo]
Length = 469
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/354 (32%), Positives = 178/354 (50%), Gaps = 56/354 (15%)
Query: 8 SYSPLLRWNPQVEEYFIRAY-------------GADHFSRISKALTRPSCYSCIRVNTLK 54
S+ P + + +VEEY + + + + L+ P + +RVNT
Sbjct: 2 SFFPKISFQHEVEEYLSKVFRNNELITALGTKEAESKYQSLLSHLSHPPAITTVRVNTNL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ V + LL IQ + + + + P L ++ + GP
Sbjct: 62 ASVKHVKKLLLEEIQK--------------QFKGTRVPVLEHPQLRDILLIPAIGPRQDL 107
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
YE EVIV +C AVLRGA VYVPG+++ S V+ GD+V+V +E
Sbjct: 108 KKYE-----SEVIVGAQCGYAVLRGAHVYVPGIISTSRFVKAGDLVSVYSDIE------- 155
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
G +G++ FE +++G G + +SR+ IF + G+ V M ++
Sbjct: 156 -------GKCKRGAKE----FEGVKVFLGNGISELSRSDIFSSHGRMTGLGVRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF VL +FLQNLPS+V +H L+PQ GERILDMCAAPGGKTT +A+L+RD+GEV+A
Sbjct: 205 SPSFDSVLPSHLFLQNLPSVVVSHVLNPQPGERILDMCAAPGGKTTHLATLMRDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV---RRKNESNDEPNMCNSKD 342
+D+ NKV I++ A + L CI + D KA+ +R+++ P + S D
Sbjct: 265 MDKIANKVKKIKQNAELLQLNCIKAFCYDGTKALSVEKREDKQEGPPFLPESFD 318
>gi|440792124|gb|ELR13352.1| NOL1/NOP2/sun family domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 469
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 163/318 (51%), Gaps = 23/318 (7%)
Query: 22 YFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASS 81
Y A G + L P + +RVN L+T D ++L +Q + +
Sbjct: 24 YHPSAQGTSDVEVWRRVLAAPPNVTSLRVNCLRTDVDSACRQLADHLQRAAPKAGPETTD 83
Query: 82 VKG-----RLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAV 136
G + Q + P L V+ + +GPH EP PP +V R C EAV
Sbjct: 84 ASGDEGAEQPQREQAMPTVHPVLRDVIILPCTGPHK----REPKYPP--AVVDRSCGEAV 137
Query: 137 LRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFE 196
LRGA +Y GV+A + + KGD+V+V V + GG +TRG + +
Sbjct: 138 LRGAHIYAAGVIAAAGDLHKGDMVSVFVDDGK----GGKTGKLTRGEFVHDAG------- 186
Query: 197 RSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHA 256
+ L++G G M R +F + G+A++M +I++ PS V++ +FLQN+PSIV H
Sbjct: 187 -NWLFVGNGRMTMGRGQMFSGTSGVAIEMVEQIYETPSLNGVMDDLLFLQNIPSIVVGHL 245
Query: 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
LDPQ G+ ILDMCAAPGGKTT IA+L D + A+D++ KV +Q+L +G+ +T
Sbjct: 246 LDPQPGDLILDMCAAPGGKTTHIAALANDRARIFALDKNVGKVEGVQRLCQRLGITSVTA 305
Query: 317 YKLDALKAVRRKNESNDE 334
LDA KA+ + + D+
Sbjct: 306 LTLDATKALLPADSAPDQ 323
>gi|157817079|ref|NP_001100837.1| NOP2/Sun domain family, member 6 [Rattus norvegicus]
gi|149021140|gb|EDL78747.1| NOL1/NOP2/Sun domain family, member 6 (predicted) [Rattus
norvegicus]
gi|171846678|gb|AAI62024.1| Nsun6 protein [Rattus norvegicus]
Length = 476
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 172/332 (51%), Gaps = 53/332 (15%)
Query: 11 PLLRWNPQVEEYFIRAY-------------GADHFSRISKALTRPSCYSCIRVNTLKTTT 57
P + P+VE Y ++ +F + L+ P ++ +RVNT +
Sbjct: 5 PKISLRPEVENYLKESFLNEEVVSASSQQEAERNFETLLLRLSHPPLFTTVRVNTHLGSV 64
Query: 58 DDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGY 117
+ V LL +Q + +I Q P L V+ + +GP
Sbjct: 65 EHVRGLLLEELQK--------------QFGGSSIPVLQHPALPDVLLIPMTGPRK----- 105
Query: 118 EPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGL 177
++ EVIV +C AVLRGA VYVPGV++ S ++ GDVV+V +
Sbjct: 106 NIERQQCEVIVGAQCGNAVLRGAHVYVPGVVSASKFMKAGDVVSVYSDI----------- 154
Query: 178 GITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQLPS 234
+G +G++ F+ + +++G G + +SR IF +GI + M I+ PS
Sbjct: 155 ---KGKCKKGAKE----FDGTKVFLGNGISELSRKDIFNGLPDLKGIGIRMTEPIYLSPS 207
Query: 235 FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDR 294
F +VL G IFLQNLPS V AH LDPQ GE+ILD+CAAPGGKTT IA+L+RD+GEV+A+D+
Sbjct: 208 FDNVLSGYIFLQNLPSTVVAHVLDPQPGEKILDLCAAPGGKTTHIAALMRDQGEVIALDK 267
Query: 295 SHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
KV +++ A+ +GL I + DA KA++
Sbjct: 268 ILTKVTKLKQNASLLGLHSIRAFCFDATKALK 299
>gi|260783662|ref|XP_002586892.1| hypothetical protein BRAFLDRAFT_116066 [Branchiostoma floridae]
gi|229272021|gb|EEN42903.1| hypothetical protein BRAFLDRAFT_116066 [Branchiostoma floridae]
Length = 471
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 170/344 (49%), Gaps = 55/344 (15%)
Query: 11 PLLRWNPQVEEYFIRAY-------------GADHFSRISKALTRPSCYSCIRVNTLKTTT 57
P L +P VE + + Y F L+ P Y+ +RV T+ T
Sbjct: 12 PRLSLDPDVENHIKKTYCNSQVVAAIGKEEAERRFHSTIDRLSLPPGYTTVRVCTVSRTR 71
Query: 58 DDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGY 117
D + ++L +++ + +A V+ P L V+ + +GPH +
Sbjct: 72 DLIREELQQLLKKEYTKKAAPCPPVEPH-----------PVLSDVLLIPTTGPHPNLQHH 120
Query: 118 EPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGL 177
KE++V C A+LRGA ++ PGV+ ++ V+ GD V+V V VE
Sbjct: 121 T-----KEIMVDIYCGAAILRGAHIFAPGVLGATADVQAGDQVSVYVDVE---------- 165
Query: 178 GITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASE----GIAVDMHNRIFQLP 233
G L+G Q PY R +++G G A MSR IF ++ GI V+M + ++ P
Sbjct: 166 ----GKCLRGFQ-KPYSGPR--VFVGNGVARMSRDDIFSVAQEQLSGIGVEMTSPLYGCP 218
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
DV+ IFLQNLPS V H LDPQ GER+LDMCAAPGGKTT +A+L+ ++G V+A D
Sbjct: 219 PLNDVMSDSIFLQNLPSTVAGHVLDPQPGERVLDMCAAPGGKTTHLATLMNNQGTVIAFD 278
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDALK-----AVRRKNESN 332
+S KV + A +GL CI Y D K AV K+E++
Sbjct: 279 KSQGKVDKVMANARRLGLTCIQAYMFDGGKSASEAAVCEKDETS 322
>gi|118085726|ref|XP_425980.2| PREDICTED: putative methyltransferase NSUN6 [Gallus gallus]
Length = 469
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/346 (32%), Positives = 174/346 (50%), Gaps = 55/346 (15%)
Query: 8 SYSPLLRWNPQVEEYFIRAY-------------GADHFSRISKALTRPSCYSCIRVNTLK 54
S+ P + + +VEEY + + + + L+ P + +RVNT
Sbjct: 2 SFFPKISFQREVEEYLSKVFRNNELITALGTKEAESKYQSLLSHLSHPPAITTVRVNTNL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ V + LL IQ + Q + + P L ++ + GP
Sbjct: 62 ASVRHVKKLLLEEIQK--------------QFQGICVPVLEHPQLRDILLIPSIGPRKDL 107
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
+E EVIV +C AVLRGA VYVPG+++ S V+ GD+V+V +E
Sbjct: 108 KKHE-----SEVIVGAQCGYAVLRGAHVYVPGIISTSRFVKTGDLVSVYSDIE------- 155
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRA---SEGIAVDMHNRIFQ 231
G +G++ FE +++G G + +SR+ IF + G+ V M ++
Sbjct: 156 -------GKCKRGAKE----FEGVKVFLGNGISELSRSDIFGLNGRTTGLGVRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF VL +FLQNLPS+V +H L+PQ GERILDMCAAPGGKTT +A+L+ D+GEV+A
Sbjct: 205 SPSFESVLPSHLFLQNLPSVVVSHVLNPQPGERILDMCAAPGGKTTHLATLMHDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA--VRRKNESNDEP 335
+D+ NKV I++ A + L CI + D KA V ++ + +EP
Sbjct: 265 MDKIANKVKKIKQNAELLQLNCIKAFCYDGTKALSVEKREDKQEEP 310
>gi|126341505|ref|XP_001377237.1| PREDICTED: putative methyltransferase NSUN6 [Monodelphis domestica]
Length = 467
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 173/344 (50%), Gaps = 53/344 (15%)
Query: 8 SYSPLLRWNPQVEEYFIRAYGADH-------------FSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE+Y ++ + F + L+ P ++ +RVNT
Sbjct: 2 SLFPNISLRPEVEDYLRSSFKNEEMTTALGVQEAERKFEALLNHLSHPPAFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ V LL I + ++ Q P ++ V+ + GP
Sbjct: 62 VSVKHVKDLLLEEIHK--------------QFNGLSVPILQHPDVQDVLLIPVIGPRN-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
+K P EVIV C AVLRGA VYVPG+M+ S ++ GDVV+V +E
Sbjct: 106 ---NINKQPLEVIVGAHCGNAVLRGAHVYVPGIMSASKFMKAGDVVSVYSDIE------- 155
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
G +G++ F +++G G + +SR IF + +GI + M ++
Sbjct: 156 -------GKCKKGAKE----FSGKKVFLGNGISELSRNEIFSLNSPLKGIGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF +VL +FLQNLPS+V +H L+PQ GE+ILDMCAAPGGKTT IA+L+RD+GEV+A
Sbjct: 205 SPSFDNVLSSSLFLQNLPSVVVSHVLNPQPGEKILDMCAAPGGKTTHIAALMRDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEP 335
+D+ +KV I++ AA + L CI + + KA+ + + P
Sbjct: 265 MDKIPSKVEKIKQNAALLQLNCIRAFCCNGTKALGKIEDGQGGP 308
>gi|56118618|ref|NP_001008125.1| NOP2/Sun domain family, member 6 [Xenopus (Silurana) tropicalis]
gi|51703758|gb|AAH81330.1| nsun6 protein [Xenopus (Silurana) tropicalis]
Length = 467
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 164/306 (53%), Gaps = 40/306 (13%)
Query: 32 FSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTI 91
F + L P ++ +RVNTL T+ ++V LL + + I
Sbjct: 39 FENLLNHLAHPPSFTTVRVNTLSTSIENVKSLLL--------------DEIHQQFPGVNI 84
Query: 92 SESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACS 151
Q P L ++ + GP + P +VIV +C AVLRGA VY G+++ S
Sbjct: 85 PILQHPVLHDLLLIPVIGPRKTLKHH-----PVQVIVGAQCGNAVLRGAHVYAAGIVSAS 139
Query: 152 SHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSR 211
++ GD V+V +E G +G++ F + ++IG G + +SR
Sbjct: 140 KWMKAGDEVSVFSDIE--------------GKCKRGAKE----FLGTKIFIGNGVSELSR 181
Query: 212 AGIFRAS---EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDM 268
IF ++ +G + M ++ PSF +VL G IFLQNLPS V +H L+PQ GERILDM
Sbjct: 182 NEIFCSNNPVKGKGIRMTEPVYLSPSFDNVLSGYIFLQNLPSAVVSHVLNPQPGERILDM 241
Query: 269 CAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRK 328
CAAPGGKTT IA+L++D+GEV+A+D+ NKV I+ A+ + LKCI + ++ KAVR +
Sbjct: 242 CAAPGGKTTHIATLMKDQGEVIAMDKIANKVEKIKHNASVLKLKCIKAFCFNSTKAVRDQ 301
Query: 329 NESNDE 334
N +++
Sbjct: 302 NSPSEQ 307
>gi|224044808|ref|XP_002192436.1| PREDICTED: putative methyltransferase NSUN6 [Taeniopygia guttata]
Length = 469
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/346 (32%), Positives = 175/346 (50%), Gaps = 58/346 (16%)
Query: 8 SYSPLLRWNPQVEEYFIRAY-------------GADHFSRISKALTRPSCYSCIRVNTLK 54
S+ P + + +VEEY + + + + L+ P ++ +RVNT
Sbjct: 2 SFFPKIVFQHEVEEYLTKVFRNNELISALGTQEAEKKYQSLLSHLSHPPAFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ V + L IQ + + + + P L+ ++ + GP
Sbjct: 62 ASVQHVKKMLFEEIQK--------------QFKGLCVPVLEHPKLQDILLIPVIGP---- 103
Query: 115 YGYEPD--KPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLD 172
PD K EVIV +C AVLRGA VYVPG+++ S V+ GD+V+V +E
Sbjct: 104 ---RPDLKKHASEVIVGAQCGYAVLRGAHVYVPGIVSTSRFVKAGDLVSVYSDIE----- 155
Query: 173 GGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRI 229
G +G++ F +++G G + +SR+ IF +S +G+ + M +
Sbjct: 156 ---------GKCKRGAKE----FNGVKVFLGNGISELSRSEIFSSSGPLKGLGIRMIEPV 202
Query: 230 FQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEV 289
+ PSF +VL +FLQNLPS+V +H L+PQ GE+ILDMCAAPGGKTT IA+L+ D+GEV
Sbjct: 203 YLSPSFDNVLPSHLFLQNLPSVVVSHVLNPQPGEKILDMCAAPGGKTTHIAALMHDQGEV 262
Query: 290 VAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR-RKNESNDE 334
+A+D+ NKV I++ A + L CI + D KA+ K E E
Sbjct: 263 IAMDKIANKVKKIKQNAEFLQLNCIKAFCYDGTKALLVEKTEDKQE 308
>gi|395539982|ref|XP_003771941.1| PREDICTED: putative methyltransferase NSUN6 [Sarcophilus harrisii]
Length = 469
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 170/336 (50%), Gaps = 53/336 (15%)
Query: 8 SYSPLLRWNPQVEEYF---------IRAYGADH----FSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE+Y + GA F + L+ P ++ +RVNT
Sbjct: 2 SLFPKISLRPEVEDYLRASFKNEEIVTVLGAQEAERKFETLLNYLSHPPAFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ V LL + + + ++ Q P + ++ + GP
Sbjct: 62 ASVKHVKDLLL--------------EEINKQFKGLSVPILQHPDVWDMLLIPVIGPRK-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
+K P EVIV C AVLRGA VYVPG+M+ S ++ GDVV+V +E
Sbjct: 106 ---NINKQPSEVIVGAHCGNAVLRGAHVYVPGIMSASRFMKAGDVVSVYSDIE------- 155
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
G +G++ F+ +++G G + +SR +F S +GI + M ++
Sbjct: 156 -------GKCKKGAKE----FDGKKVFLGNGISELSRNEMFSLSSPLKGIGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF +VL +FLQNLPS V +H L+PQ GE+ILDMCAAPGGKTT IA+L+ D+GEV+A
Sbjct: 205 SPSFDNVLSSALFLQNLPSAVVSHVLNPQPGEKILDMCAAPGGKTTHIAALMHDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR 327
+D+ NKV I++ AA + L CI + + KA+ +
Sbjct: 265 LDKIPNKVEKIKQNAALLHLNCIRAFCYNGTKALGK 300
>gi|390465106|ref|XP_003733344.1| PREDICTED: putative methyltransferase NSUN6 isoform 2 [Callithrix
jacchus]
Length = 379
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 170/335 (50%), Gaps = 53/335 (15%)
Query: 8 SYSPLLRWNPQVEEYF---------IRAYGADH----FSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y + A+G + F + K L+ P ++ +RVNT
Sbjct: 2 SVFPKISLRPEVENYLKEGFVNKEIVSAFGKEEAERKFETLLKHLSHPPSFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ V LL +Q +L +I + P L+ V+ + GP
Sbjct: 62 ASVQHVKNLLLDELQK--------------QLNGLSIPILEHPDLQDVLLIPVIGPRK-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
K E IV +C AVLRGA VY PG+++ S ++ GDV++V +
Sbjct: 106 ---NIKKQQCEAIVGAQCGNAVLRGAHVYAPGIVSASKFMKAGDVISVYSDI-------- 154
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
+G +G++ F+ + +++G G + +SR IF +G+ + M ++
Sbjct: 155 ------KGKCKKGAKE----FDGTKVFLGNGISKLSRKEIFNGLPELKGMGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF +VL +FLQNLPS V H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A
Sbjct: 205 SPSFDNVLPRYLFLQNLPSAVVTHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+D+ NKV IQ+ A+ +GL I + D KAV+
Sbjct: 265 LDKIFNKVEKIQQNASLLGLNSIRAFCFDGTKAVK 299
>gi|296206262|ref|XP_002750130.1| PREDICTED: putative methyltransferase NSUN6 isoform 1 [Callithrix
jacchus]
Length = 468
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 170/335 (50%), Gaps = 53/335 (15%)
Query: 8 SYSPLLRWNPQVEEYF---------IRAYGADH----FSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y + A+G + F + K L+ P ++ +RVNT
Sbjct: 2 SVFPKISLRPEVENYLKEGFVNKEIVSAFGKEEAERKFETLLKHLSHPPSFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ V LL +Q +L +I + P L+ V+ + GP
Sbjct: 62 ASVQHVKNLLLDELQK--------------QLNGLSIPILEHPDLQDVLLIPVIGPRK-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
K E IV +C AVLRGA VY PG+++ S ++ GDV++V +
Sbjct: 106 ---NIKKQQCEAIVGAQCGNAVLRGAHVYAPGIVSASKFMKAGDVISVYSDI-------- 154
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
+G +G++ F+ + +++G G + +SR IF +G+ + M ++
Sbjct: 155 ------KGKCKKGAKE----FDGTKVFLGNGISKLSRKEIFNGLPELKGMGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF +VL +FLQNLPS V H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A
Sbjct: 205 SPSFDNVLPRYLFLQNLPSAVVTHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+D+ NKV IQ+ A+ +GL I + D KAV+
Sbjct: 265 LDKIFNKVEKIQQNASLLGLNSIRAFCFDGTKAVK 299
>gi|311265698|ref|XP_003130779.1| PREDICTED: putative methyltransferase NSUN6 [Sus scrofa]
Length = 472
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 168/323 (52%), Gaps = 40/323 (12%)
Query: 16 NPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSE 75
N +V F + F + + L+ P ++ +RVNT LA +Q+ +
Sbjct: 23 NKEVVSAFGKQEAERKFETLLQNLSHPPSFTTVRVNTH-----------LASVQHVKTLL 71
Query: 76 ADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEA 135
D ++ + + Q P L+ V+ + GP + EVIV +C +
Sbjct: 72 HD---ELQKQFNGLSFPVLQHPDLQDVLLIPVIGPRK-----NIKQQHCEVIVGAQCGNS 123
Query: 136 VLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYF 195
VLRGA VYVPG+++ S ++ GD V+V + +G +G++ F
Sbjct: 124 VLRGAHVYVPGIVSASKFMKGGDTVSVYSDI--------------KGKCKKGAKE----F 165
Query: 196 ERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIV 252
+ + +++G G + +SR IF +GI + M ++ PSF DVL G +FLQNLPS V
Sbjct: 166 DGTKIFLGNGISELSRKEIFSGLPDLKGIGIRMTEPVYLSPSFDDVLPGYLFLQNLPSAV 225
Query: 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312
H LDPQ GERILD+CAAPGGKTT IA+ +RD+GEV+A+D+ NKV I++ A +GL
Sbjct: 226 VTHVLDPQPGERILDLCAAPGGKTTHIAARMRDQGEVIALDKIANKVEKIKQNALLLGLN 285
Query: 313 CITTYKLDALKAVRRKNESNDEP 335
I + D KA++ ++ EP
Sbjct: 286 SIRAFCFDGTKALKLDIDTEGEP 308
>gi|149412200|ref|XP_001509484.1| PREDICTED: putative methyltransferase NSUN6 [Ornithorhynchus
anatinus]
Length = 466
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 164/331 (49%), Gaps = 53/331 (16%)
Query: 11 PLLRWNPQVEEYFIRAY-------------GADHFSRISKALTRPSCYSCIRVNTLKTTT 57
P + P+VEE+ A+ F + K L+ P ++ +RVNT +
Sbjct: 5 PKIALRPEVEEHLRGAFMNVEVITAVGRQAAEARFEALLKRLSHPPAFTTVRVNTRLASV 64
Query: 58 DDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGY 117
V L IQ + Q ++ Q P L ++ + GP
Sbjct: 65 QQVKSLLCEEIQK--------------QFQGLSVPVLQHPRLPDLLLIPVIGPRK----- 105
Query: 118 EPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGL 177
+ ++ P IV +C AVLRGA +YVPG++A S ++ G+VV+V VE G G
Sbjct: 106 DVEEWPIRAIVGAQCGNAVLRGAHIYVPGILAASGGMKAGEVVSVYSDVEGKCRKGAKG- 164
Query: 178 GITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQLPS 234
F+ + ++G G + +SR IF ++ +GI + M ++ PS
Sbjct: 165 -----------------FDGTQAFLGNGISELSRREIFGSNSPLKGIGIRMVEPVYLSPS 207
Query: 235 FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDR 294
F +VL G +FLQNLPS V +H L PQ GERILDMCAAPGGKTT IA+L+ D GEV+A+D+
Sbjct: 208 FDNVLPGYLFLQNLPSAVASHVLGPQPGERILDMCAAPGGKTTHIAALMEDRGEVIALDK 267
Query: 295 SHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325
NKV I++ A + L CI + D KA+
Sbjct: 268 IANKVEKIKQTAKLLQLNCIKAFCYDGTKAL 298
>gi|317420025|emb|CBN82061.1| methyltransferase NSUN6 [Dicentrarchus labrax]
Length = 467
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/346 (32%), Positives = 174/346 (50%), Gaps = 45/346 (13%)
Query: 8 SYSPLLRWNPQVEEYFIRAY-------GADH------FSRISKALTRPSCYSCIRVNTLK 54
S P + P+V ++ + DH F ++ L+ P Y+C+R +T
Sbjct: 2 SVFPKISLKPEVADFLKSVFVNKEVLAAVDHQVAECRFQKLLTCLSHPPSYTCVRASTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTI- 113
+++ KL ++ S + SV+ + +IP V+ + GP +
Sbjct: 62 APLEEIRHKLGEELKKQMCSSSAEEVSVQ------ILPHPRIPD---VLLLPVDGPRYVR 112
Query: 114 DYGYEPDKP-PKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLD 172
+ G P +P EV+V +C AVLRGA V+ PG++A ++ GD+V+V +E
Sbjct: 113 NAGATPVEPLSSEVVVDAQCGSAVLRGAHVFAPGIVASPKFMKTGDLVSVFSDLE----- 167
Query: 173 GGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIF---RASEGIAVDMHNRI 229
G T QG + +++G G A M R +F + ++GI V M +
Sbjct: 168 ---GKCTRAATSFQGKR----------VFVGNGVAQMDRFSLFCTDKPAKGIGVRMVEPL 214
Query: 230 FQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEV 289
+Q PSF VL FLQNLPS+V H L P+ GERILDMCAAPGGKT+ IA+L+ D+GEV
Sbjct: 215 YQSPSFDGVLPSLAFLQNLPSVVVGHVLGPRPGERILDMCAAPGGKTSHIAALMGDQGEV 274
Query: 290 VAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEP 335
VA+DR NK+ I++ A + L+ IT Y ++ +AV + P
Sbjct: 275 VALDRIRNKIDRIRENAQMLHLRSITAYCFNSTQAVSSDPAHTEGP 320
>gi|148676130|gb|EDL08077.1| NOL1/NOP2/Sun domain family 6, isoform CRA_b [Mus musculus]
Length = 494
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 167/337 (49%), Gaps = 53/337 (15%)
Query: 6 RYSYSPLLRWNPQVEEYFIRAY-------------GADHFSRISKALTRPSCYSCIRVNT 52
R P + P+VE Y ++ F + L+ P + +RVNT
Sbjct: 18 RMYVFPKISLRPEVENYLKESFLNEEAVSASSRQEAERKFETLLLRLSHPPSMTTVRVNT 77
Query: 53 LKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHT 112
+ V LL +Q + +I Q P L V+ + +GP
Sbjct: 78 HLGSVQHVRGLLLEELQK--------------QFGESSIPVVQHPALPDVLLIPMTGPRK 123
Query: 113 IDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLD 172
++ EVIV +C AVLRGA VYVPG+++ S ++ GDV++V +
Sbjct: 124 -----NIERQQGEVIVGAQCGNAVLRGAHVYVPGIVSASKFMKAGDVISVYSDIN----- 173
Query: 173 GGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRI 229
G +G++ F+ + +++G G + +SR IF +GI + M I
Sbjct: 174 ---------GKCKKGAKE----FDGTKVFLGNGISELSRKDIFNGLPDLKGIGIRMTEPI 220
Query: 230 FQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEV 289
+ PSF +VL IFLQNLPS V AH LDPQ GE+ILDMCAAPGGKTT A+L++D+GEV
Sbjct: 221 YLSPSFDNVLPSYIFLQNLPSTVVAHVLDPQPGEKILDMCAAPGGKTTHTAALMQDKGEV 280
Query: 290 VAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+A+D+ KV +++ A+ +GL I + DA KA++
Sbjct: 281 IALDKILTKVNKLKQNASLLGLHSIRAFCFDATKALK 317
>gi|148227140|ref|NP_001090297.1| NOP2/Sun domain family, member 6 [Xenopus laevis]
gi|114108045|gb|AAI23126.1| MGC154309 protein [Xenopus laevis]
Length = 467
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 163/310 (52%), Gaps = 43/310 (13%)
Query: 32 FSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTI 91
F + K L P ++ +RVN L T+ ++V ++ + + + I
Sbjct: 39 FENLLKHLAHPPSFTTVRVNPLSTSIENV--------------KSLLKEEIHKQFPGLNI 84
Query: 92 SESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACS 151
Q P + ++ + GP + P +VIV +C AVLRGA VY G+++ S
Sbjct: 85 PILQHPIVPDLLLIPVIGPRRTLKQH-----PVQVIVGAQCGNAVLRGAHVYAAGIVSAS 139
Query: 152 SHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSR 211
++ GD V+V +E G +G++ F + ++IG G + +SR
Sbjct: 140 KWMKAGDEVSVFSDIE--------------GKCKRGAKE----FTGNKIFIGNGISELSR 181
Query: 212 AGIF---RASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDM 268
IF +G + M ++ PSF +VL G IFLQNLPS V +H L+PQ GERILDM
Sbjct: 182 NEIFCCNNPVKGKGIKMTEPVYLSPSFDNVLSGYIFLQNLPSAVVSHVLNPQPGERILDM 241
Query: 269 CAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRK 328
CAAPGGKTT IA+L+ D+GEV+A+D+ +KV I++ A+ + LKCI + ++ KAVR +
Sbjct: 242 CAAPGGKTTHIATLMEDQGEVIALDKIASKVEKIKQNASVLKLKCIKAFCFNSTKAVRDQ 301
Query: 329 N---ESNDEP 335
N E D P
Sbjct: 302 NCPDEQGDGP 311
>gi|260099658|ref|NP_083226.3| putative methyltransferase NSUN6 isoform a [Mus musculus]
gi|260099660|ref|NP_001159413.1| putative methyltransferase NSUN6 isoform a [Mus musculus]
gi|119372268|sp|Q7TS68.2|NSUN6_MOUSE RecName: Full=Putative methyltransferase NSUN6; AltName:
Full=NOL1/NOP2/Sun domain family member 6
gi|12855745|dbj|BAB30442.1| unnamed protein product [Mus musculus]
gi|26346707|dbj|BAC37002.1| unnamed protein product [Mus musculus]
gi|74208798|dbj|BAE21163.1| unnamed protein product [Mus musculus]
gi|148676131|gb|EDL08078.1| NOL1/NOP2/Sun domain family 6, isoform CRA_c [Mus musculus]
Length = 476
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 166/332 (50%), Gaps = 53/332 (15%)
Query: 11 PLLRWNPQVEEYFIRAY-------------GADHFSRISKALTRPSCYSCIRVNTLKTTT 57
P + P+VE Y ++ F + L+ P + +RVNT +
Sbjct: 5 PKISLRPEVENYLKESFLNEEAVSASSRQEAERKFETLLLRLSHPPSMTTVRVNTHLGSV 64
Query: 58 DDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGY 117
V LL +Q + +I Q P L V+ + +GP
Sbjct: 65 QHVRGLLLEELQK--------------QFGESSIPVVQHPALPDVLLIPMTGPRK----- 105
Query: 118 EPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGL 177
++ EVIV +C AVLRGA VYVPG+++ S ++ GDV++V +
Sbjct: 106 NIERQQGEVIVGAQCGNAVLRGAHVYVPGIVSASKFMKAGDVISVYSDI----------- 154
Query: 178 GITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQLPS 234
G +G++ F+ + +++G G + +SR IF +GI + M I+ PS
Sbjct: 155 ---NGKCKKGAKE----FDGTKVFLGNGISELSRKDIFNGLPDLKGIGIRMTEPIYLSPS 207
Query: 235 FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDR 294
F +VL IFLQNLPS V AH LDPQ GE+ILDMCAAPGGKTT A+L++D+GEV+A+D+
Sbjct: 208 FDNVLPSYIFLQNLPSTVVAHVLDPQPGEKILDMCAAPGGKTTHTAALMQDKGEVIALDK 267
Query: 295 SHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
KV +++ A+ +GL I + DA KA++
Sbjct: 268 ILTKVNKLKQNASLLGLHSIRAFCFDATKALK 299
>gi|354482489|ref|XP_003503430.1| PREDICTED: putative methyltransferase NSUN6 [Cricetulus griseus]
gi|344245942|gb|EGW02046.1| Putative methyltransferase NSUN6 [Cricetulus griseus]
Length = 476
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 169/326 (51%), Gaps = 53/326 (16%)
Query: 17 PQVEEYFIRAY-------------GADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQK 63
P+VE Y +++ F + L P ++ +RVNT + + V
Sbjct: 11 PEVENYLKQSFLNKEVVSASSKQEAERKFEALLIRLAHPPSFTTVRVNTHLASVEYVRDL 70
Query: 64 LLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPP 123
LL +Q + + + Q P L V+ + +GP ++
Sbjct: 71 LLEELQK--------------QFRGLRVPVLQHPTLPDVLLIPVTGPRR-----NIERRQ 111
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
EVIV +C AVLRGA VYVPG+++ S ++ GDV++V + +G
Sbjct: 112 CEVIVGAQCGNAVLRGAHVYVPGIVSASKFMKAGDVISVYSDI--------------KGK 157
Query: 184 VLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQLPSFYDVLE 240
+G++ F+ + +++G G + +SR IF +GI + M I+ PSF +VL
Sbjct: 158 CKKGAKE----FDGTKVFLGNGISELSRKDIFNGIPDLKGIGIRMTEPIYLSPSFDNVLP 213
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
+FLQNLPS V AH L+PQ GE+ILD+CAAPGGKTT IA+L++D+GEV+A+D+ NKV
Sbjct: 214 SYLFLQNLPSAVVAHVLNPQPGEKILDLCAAPGGKTTHIAALMQDQGEVIALDKVLNKVE 273
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVR 326
+++ A+ +GL I + DA KA++
Sbjct: 274 KLKQNASLLGLHSIRAFCFDATKALK 299
>gi|410963274|ref|XP_003988190.1| PREDICTED: putative methyltransferase NSUN6 [Felis catus]
Length = 469
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 156/299 (52%), Gaps = 40/299 (13%)
Query: 31 HFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGT 90
F + L+ P ++ +RVNT + V LL ++ + +
Sbjct: 38 RFETLLNHLSHPPSFTTVRVNTHLASVQHVKNLLL--------------DELRKQFNGLS 83
Query: 91 ISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMAC 150
+ Q P L+ V+ + GP K E +V +C AVLRGA VYVPG+++
Sbjct: 84 VPILQHPDLQDVLLIPIIGPRR-----NIKKQQCEAVVGAQCGNAVLRGAHVYVPGIVSA 138
Query: 151 SSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMS 210
S ++ GDV++V + +G +G++ F+ + +++G G + +S
Sbjct: 139 SKFMKAGDVISVYSDI--------------KGKCKKGAKE----FDGTKVFLGNGISELS 180
Query: 211 RAGIFRAS---EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD 267
R IF +GI + M I+ PSF +VL +FLQNLPS V H LDPQ GE+ILD
Sbjct: 181 RKEIFNGLPELKGIGIRMTEPIYLSPSFDNVLPNYLFLQNLPSAVVTHVLDPQPGEKILD 240
Query: 268 MCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+CAAPGGKTT IA+L+RD+GEV+A+D+ NKV I++ A +GL I + D KA++
Sbjct: 241 LCAAPGGKTTHIAALMRDQGEVIALDKISNKVEKIKQNALLLGLNSIKAFCFDGTKALK 299
>gi|31753229|gb|AAH53751.1| NOL1/NOP2/Sun domain family member 6 [Mus musculus]
Length = 476
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 166/332 (50%), Gaps = 53/332 (15%)
Query: 11 PLLRWNPQVEEYFIRAY-------------GADHFSRISKALTRPSCYSCIRVNTLKTTT 57
P + P+VE Y ++ F + L+ P + +RVNT +
Sbjct: 5 PKISLRPEVENYLKESFLNEEAVSASSRQEAERKFETLLLRLSHPPSMTTVRVNTHLGSV 64
Query: 58 DDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGY 117
V LL +Q + +I Q P L V+ + +GP
Sbjct: 65 QHVRGLLLEELQK--------------QFGESSIPVVQHPALPDVLLIPMTGPRK----- 105
Query: 118 EPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGL 177
++ EVIV +C AVLRGA VYVPG+++ S ++ GDV++V +
Sbjct: 106 NIERQQGEVIVGAQCGNAVLRGAHVYVPGIVSASKFMKAGDVISVYSDI----------- 154
Query: 178 GITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQLPS 234
G +G++ F+ + +++G G + +SR IF +GI + M I+ PS
Sbjct: 155 ---NGKCKKGAKE----FDGTKVFLGNGISELSRKDIFNGLPDLKGIGIRMTEPIYLSPS 207
Query: 235 FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDR 294
F +VL IFLQNLPS V AH LDPQ GE+IL+MCAAPGGKTT A+L++D+GEV+A+D+
Sbjct: 208 FDNVLPSYIFLQNLPSTVVAHVLDPQPGEKILEMCAAPGGKTTHTAALMQDKGEVIALDK 267
Query: 295 SHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
KV +++ A+ +GL I + DA KA++
Sbjct: 268 ILTKVNKLKQNASLLGLHSIRAFCFDATKALK 299
>gi|432928676|ref|XP_004081173.1| PREDICTED: putative methyltransferase NSUN6-like isoform 2 [Oryzias
latipes]
Length = 466
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 161/298 (54%), Gaps = 33/298 (11%)
Query: 32 FSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTI 91
F + L+ P ++C+R +T +++ KL + SS D ++SV+ +
Sbjct: 39 FQNLLLCLSHPPLHTCVRASTHLAPLEEIRSKLQEELSQQTSS--DSSASVQ------IL 90
Query: 92 SESQIPGLEYVVFVKGSGPHTI-DYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMAC 150
S Q+P V+ + GP + + G ++ EV+V +C AVLRGA V+ PG++A
Sbjct: 91 SHPQVPD---VLLLPVDGPRYVRNPGARVEQLSSEVVVGAQCGNAVLRGAHVFAPGIVAS 147
Query: 151 SSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMS 210
+++ GDVV+V +E TRG + F+ + +++G G A M
Sbjct: 148 PKYMKVGDVVSVFSDLEG---------RCTRGAL---------SFQGNKVFVGNGVAEMD 189
Query: 211 RAGIFRASE---GIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD 267
R+ IF E G+ V M +++ PSF VL FLQN PS+V H L P+ GERILD
Sbjct: 190 RSSIFCTDEHPRGVGVRMVEPLYRSPSFDGVLPSLAFLQNFPSVVVGHVLGPRPGERILD 249
Query: 268 MCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325
MCAAPGGKT IA+L+ D+GEVVA+DR NK+ I++ A + L+ I Y + ++AV
Sbjct: 250 MCAAPGGKTCHIAALMGDQGEVVALDRIRNKIARIRQNAETLQLQSIKAYCFNGIQAV 307
>gi|148676129|gb|EDL08076.1| NOL1/NOP2/Sun domain family 6, isoform CRA_a [Mus musculus]
Length = 455
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 158/305 (51%), Gaps = 40/305 (13%)
Query: 25 RAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKG 84
R F + L+ P + +RVNT + V LL +Q
Sbjct: 11 RQEAERKFETLLLRLSHPPSMTTVRVNTHLGSVQHVRGLLLEELQK-------------- 56
Query: 85 RLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYV 144
+ +I Q P L V+ + +GP ++ EVIV +C AVLRGA VYV
Sbjct: 57 QFGESSIPVVQHPALPDVLLIPMTGPRK-----NIERQQGEVIVGAQCGNAVLRGAHVYV 111
Query: 145 PGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQ 204
PG+++ S ++ GDV++V + G +G++ F+ + +++G
Sbjct: 112 PGIVSASKFMKAGDVISVYSDIN--------------GKCKKGAKE----FDGTKVFLGN 153
Query: 205 GTAMMSRAGIFRAS---EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQK 261
G + +SR IF +GI + M I+ PSF +VL IFLQNLPS V AH LDPQ
Sbjct: 154 GISELSRKDIFNGLPDLKGIGIRMTEPIYLSPSFDNVLPSYIFLQNLPSTVVAHVLDPQP 213
Query: 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
GE+ILDMCAAPGGKTT A+L++D+GEV+A+D+ KV +++ A+ +GL I + DA
Sbjct: 214 GEKILDMCAAPGGKTTHTAALMQDKGEVIALDKILTKVNKLKQNASLLGLHSIRAFCFDA 273
Query: 322 LKAVR 326
KA++
Sbjct: 274 TKALK 278
>gi|428181325|gb|EKX50189.1| hypothetical protein GUITHDRAFT_104001 [Guillardia theta CCMP2712]
Length = 536
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 163/348 (46%), Gaps = 58/348 (16%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
V + +R Y D R+ AL RP +SC+R NT++ + +++ ++ ++ E
Sbjct: 16 HVRQPLLRFYEEDELERVCNALARPPAHSCVRANTVRISGEELAGRMREELERLAVREG- 74
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVL 137
S G + G + ++ G V+ I P+ +E++VSR+CAEAVL
Sbjct: 75 -PSEHAGVSRYGEVRVHEVIGDAVVIRPDEHDAREI----LPEG--RELVVSRRCAEAVL 127
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFE- 196
RG+ +++PG+M CS H KGDVV V V+ L G +L + DP +
Sbjct: 128 RGSHIFIPGMMGCSPHTAKGDVVTVLCDVQDRFLRGA------STHILSTRKLDPKRMKG 181
Query: 197 -----------------------RSGLY--------------------IGQGTAMMSRAG 213
S LY IG+G + R
Sbjct: 182 FVSNHMHEVSDEKKQQFRLNNSKLSHLYGDTNRSSDASFPELPEGIVVIGKGVMQVDRRV 241
Query: 214 IFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPG 273
A EG+ M IF+ P +L G +++QN PSIV H LDPQ GERILDMCA+PG
Sbjct: 242 AMSAKEGLGCIMTECIFRAPPLNGLLPGLMYVQNFPSIVVGHVLDPQPGERILDMCASPG 301
Query: 274 GKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
GKTT A++++ EG V A+DR+ K I++ A +GLK + K D+
Sbjct: 302 GKTTHAAAIMQGEGSVTAIDRTQAKAAVIRENAQHLGLKNVWVLKGDS 349
>gi|351705079|gb|EHB07998.1| Putative methyltransferase NSUN6 [Heterocephalus glaber]
Length = 476
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 166/332 (50%), Gaps = 53/332 (15%)
Query: 11 PLLRWNPQVEEY----FI---------RAYGADHFSRISKALTRPSCYSCIRVNTLKTTT 57
P + P+VE Y F+ +A F + L+ P ++ +RVNT +
Sbjct: 5 PKISLRPEVENYLKEGFVNNEVVSASGKAAAERKFEALLNHLSHPPSFTTVRVNTHLASV 64
Query: 58 DDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGY 117
V + LL +Q + ++ Q P L+ V+ + GP
Sbjct: 65 QHVKELLLDELQQ--------------QFNGLSVPVLQHPDLQDVLLIPVIGPRK----- 105
Query: 118 EPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGL 177
+ E +V +C AVLRGA VY PG+++ SS ++ GDV++V +
Sbjct: 106 NIKRQQCEAVVGAQCGSAVLRGAHVYTPGIVSASSFMKAGDVISVYSDI----------- 154
Query: 178 GITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQLPS 234
+G +G++ F+ + +++G G + +SR IF GI + M I+ PS
Sbjct: 155 ---KGKCKKGARE----FDGTKIFLGNGISTLSRKEIFSGLPRLRGIGIRMTEPIYLSPS 207
Query: 235 FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDR 294
F +VL +FLQNLPS V H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A+D+
Sbjct: 208 FDNVLPSYLFLQNLPSAVVTHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIALDK 267
Query: 295 SHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
NKV I++ A +GL I + D KA++
Sbjct: 268 IANKVEKIKQNALLLGLNSIKAFCFDGTKALK 299
>gi|149743533|ref|XP_001497025.1| PREDICTED: putative methyltransferase NSUN6 [Equus caballus]
Length = 469
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 161/317 (50%), Gaps = 43/317 (13%)
Query: 32 FSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTI 91
F + L+ P ++ +RVNT + V LL +Q + ++
Sbjct: 39 FETLLNHLSHPPSFTTVRVNTHLASVQHVKNLLLDELQK--------------QFNGLSV 84
Query: 92 SESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACS 151
Q P L+ V+ + GP K E IV +C AVLRGA VYVPG+++ S
Sbjct: 85 PVLQHPDLQDVLLIPVIGPRK-----NIRKQQCEAIVGAQCGSAVLRGAHVYVPGIVSAS 139
Query: 152 SHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSR 211
++ GDV++V + +G +G++ F+ + +++G G + +SR
Sbjct: 140 KFMKAGDVISVYSDI--------------KGKCKRGAKE----FDGTKVFLGNGISELSR 181
Query: 212 AGIF---RASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDM 268
IF +G+ + M ++ PSF VL IFLQNLPS + H LDPQ GE+ILD+
Sbjct: 182 REIFSGLHELKGVGIRMTEPVYLSPSFDKVLPSYIFLQNLPSALATHVLDPQPGEKILDL 241
Query: 269 CAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR- 327
CAAPGGKTT IA+L+ D+GEV+A+D+ NKV I++ A +GL I + D KA++
Sbjct: 242 CAAPGGKTTHIAALMHDQGEVIALDKISNKVEKIKQNALLLGLNSIRAFCFDGTKALKLD 301
Query: 328 --KNESNDEPNMCNSKD 342
KN + P + S D
Sbjct: 302 MVKNTEGEPPFLPESFD 318
>gi|291402236|ref|XP_002717453.1| PREDICTED: NOL1/NOP2/Sun domain family, member 6 [Oryctolagus
cuniculus]
Length = 469
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 167/335 (49%), Gaps = 53/335 (15%)
Query: 8 SYSPLLRWNPQVEEYFIRAY-------------GADHFSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y + F + L+ P ++ +RVNT
Sbjct: 2 SVFPKISLRPEVEHYLKEGFLNKEVVSTSGKQEAERKFETLLNRLSHPPSFTTVRVNTH- 60
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
LA IQ + D ++ + ++ Q P L+ V+ + GP
Sbjct: 61 ----------LASIQCVKNLLHD---ELQKQFNGLSVPVFQHPDLQDVLLIPVVGPRK-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
K EV+V +C AVLRGA +YVPG++A S ++ GDVV++ +
Sbjct: 106 ---NIKKQQCEVVVGAQCGNAVLRGAHIYVPGIVAASKFMKAGDVVSIYSDI-------- 154
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
+G +G++ F+ + +++G G + +SR IF +GI + M ++
Sbjct: 155 ------KGKCKKGAKE----FDGTKIFLGNGISELSRKEIFNGLPELKGIGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF +VL ++LQNLPS V H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A
Sbjct: 205 SPSFDNVLSSYLYLQNLPSAVVTHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+D+ NKV I++ A +GL I + D KA++
Sbjct: 265 LDKISNKVEKIKQNALLLGLNSIRAFCFDGTKALK 299
>gi|55732314|emb|CAH92860.1| hypothetical protein [Pongo abelii]
Length = 357
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 173/354 (48%), Gaps = 56/354 (15%)
Query: 8 SYSPLLRWNPQVEEYF---------IRAYGADH----FSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y + A G F + K L+ P ++ +RVNT
Sbjct: 2 SVFPKISLRPEVENYLKEGFMNKEIVTALGKQEAERKFETLLKHLSHPPSFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ V LL +Q + ++ Q P L+ V+ + GP
Sbjct: 62 ASVQHVKNLLLDELQK--------------QFNGLSVPILQHPDLQDVLLIPVIGPRK-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
K E IV +C AVLRGA VY PG+++ S ++ GDV++V +
Sbjct: 106 ---NIKKQQCEAIVGAQCGNAVLRGAHVYAPGIVSASKFMKAGDVISVYSDI-------- 154
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
+G +G++ F+ + +++G G + +SR IF +G+ + M ++
Sbjct: 155 ------KGKCKKGAKE----FDGTKVFLGNGISELSRKEIFSGLPELKGMGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF +VL +FLQNLPS + H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A
Sbjct: 205 SPSFDNVLPRYLFLQNLPSALVTHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR---KNESNDEPNMCNSKD 342
+D+ NKV I++ A +GL I + D KAV+ ++ D P + S D
Sbjct: 265 LDKIFNKVEKIKQNALLLGLNSIRAFCFDGTKAVKLDMVEDTEGDPPFLPESFD 318
>gi|432928674|ref|XP_004081172.1| PREDICTED: putative methyltransferase NSUN6-like isoform 1 [Oryzias
latipes]
Length = 459
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 159/297 (53%), Gaps = 38/297 (12%)
Query: 32 FSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTI 91
F + L+ P ++C+R +T +++ KL + SS D ++SV+ +
Sbjct: 39 FQNLLLCLSHPPLHTCVRASTHLAPLEEIRSKLQEELSQQTSS--DSSASVQ------IL 90
Query: 92 SESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACS 151
S Q+P V+ + GP ++ + EV+V +C AVLRGA V+ PG++A
Sbjct: 91 SHPQVPD---VLLLPVDGPRRVE------QLSSEVVVGAQCGNAVLRGAHVFAPGIVASP 141
Query: 152 SHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSR 211
+++ GDVV+V +E TRG + F+ + +++G G A M R
Sbjct: 142 KYMKVGDVVSVFSDLEG---------RCTRGAL---------SFQGNKVFVGNGVAEMDR 183
Query: 212 AGIFRASE---GIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDM 268
+ IF E G+ V M +++ PSF VL FLQN PS+V H L P+ GERILDM
Sbjct: 184 SSIFCTDEHPRGVGVRMVEPLYRSPSFDGVLPSLAFLQNFPSVVVGHVLGPRPGERILDM 243
Query: 269 CAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325
CAAPGGKT IA+L+ D+GEVVA+DR NK+ I++ A + L+ I Y + ++AV
Sbjct: 244 CAAPGGKTCHIAALMGDQGEVVALDRIRNKIARIRQNAETLQLQSIKAYCFNGIQAV 300
>gi|402879734|ref|XP_003903486.1| PREDICTED: putative methyltransferase NSUN6 [Papio anubis]
Length = 469
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 165/335 (49%), Gaps = 53/335 (15%)
Query: 8 SYSPLLRWNPQVEEYFIRAY-------------GADHFSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y ++ F + K L+ P ++ +RVNT
Sbjct: 2 SIFPKISLRPEVENYLKESFVNKEIVTALGKQEAERKFETLLKHLSHPPSFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ V L +Q + ++ Q P L+ V+ + GP
Sbjct: 62 ASVQHVKNLLFDELQK--------------QFNGLSVPILQHPDLQDVLLIPVIGPRK-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
K E IV +C AVLRGA VY PG+++ S ++ GDV++V +
Sbjct: 106 ---NIKKQQCEAIVGAQCGNAVLRGAHVYAPGIVSASKFMKAGDVISVYSDI-------- 154
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
+G +G++ F+ + +++G G + +SR IF +G+A+ M ++
Sbjct: 155 ------KGKCKKGARE----FDGTKVFLGNGISELSRKEIFNGLPELKGMAIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF +VL +FLQNLPS + H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A
Sbjct: 205 SPSFDNVLPRYLFLQNLPSALVTHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+D+ NKV I++ A +GL I + D KAV+
Sbjct: 265 LDKIFNKVEKIKQNALLLGLNSIRAFCFDGTKAVK 299
>gi|260809455|ref|XP_002599521.1| hypothetical protein BRAFLDRAFT_80967 [Branchiostoma floridae]
gi|229284800|gb|EEN55533.1| hypothetical protein BRAFLDRAFT_80967 [Branchiostoma floridae]
Length = 280
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/205 (43%), Positives = 121/205 (59%), Gaps = 21/205 (10%)
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
KE++V C A+LRGA ++ PGV+ ++ V+ GD V+V V VE G
Sbjct: 80 KEIMVDIHCGAAILRGAHIFAPGVLGATADVQAGDQVSVYVDVE--------------GK 125
Query: 184 VLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASE----GIAVDMHNRIFQLPSFYDVL 239
L+G Q PY R +++G G A MSR IF ++ GI V+M + ++ P DV+
Sbjct: 126 CLRGFQK-PYSGPR--VFVGNGVARMSRDDIFSVAQEQLSGIGVEMTSPLYGCPPLNDVM 182
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
IFLQNLPS V H LDPQ GER+LDMCAAPGGKTT +A+L+ ++G V+A+D+S KV
Sbjct: 183 SDSIFLQNLPSTVAGHVLDPQPGERVLDMCAAPGGKTTHLATLMSNQGAVIALDKSQGKV 242
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
+ A +GL CI Y D KA
Sbjct: 243 DKVMANARRLGLTCIQAYMFDGGKA 267
>gi|297300588|ref|XP_001094308.2| PREDICTED: putative methyltransferase NSUN6-like, partial [Macaca
mulatta]
Length = 307
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 167/335 (49%), Gaps = 53/335 (15%)
Query: 8 SYSPLLRWNPQVEEYF---------IRAYGADH----FSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y + A G F + K L+ P ++ +RVNT
Sbjct: 2 SIFPKISLRPEVENYLKEGFVNKEIVTALGKQEAERKFETLLKHLSHPPSFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
T+ V LL +Q + ++ Q P L+ V+ + GP
Sbjct: 62 TSVQHVKNLLLDELQK--------------QFNGLSVPILQHPDLQDVLLIPVIGPRK-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
K E IV +C AVLRGA VY PG+++ S ++ GDV++V +
Sbjct: 106 ---NIKKQQCEAIVGAQCGNAVLRGAHVYAPGIVSASKFMKAGDVISVYSDI-------- 154
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
+G +G++ F+ + +++G G + +SR IF +G+ + M ++
Sbjct: 155 ------KGKCKKGARE----FDGTKVFLGNGISELSRKEIFNGLPELKGMGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF +VL +FLQNLPS + H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A
Sbjct: 205 SPSFDNVLPRYLFLQNLPSALVTHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+D+ +KV I++ A +GL I + D KAV+
Sbjct: 265 MDKIFSKVEKIKQNALLLGLNSIRAFCFDGTKAVK 299
>gi|444706028|gb|ELW47391.1| Putative methyltransferase NSUN6 [Tupaia chinensis]
Length = 476
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 164/335 (48%), Gaps = 53/335 (15%)
Query: 8 SYSPLLRWNPQVEEYFIRAY-------------GADHFSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y + + + L+ P ++ +RVNT
Sbjct: 2 STFPKISLRPEVENYLKEGFMNKEILSVLGKQEAERKYETLLNHLSHPPSFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ V LL +Q + +I Q P L+ ++ + GP
Sbjct: 62 ASVQQVKSLLLDELQK--------------QFNGISIPILQHPDLQDILLIPVIGPRK-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
K E IV +C AVLRGA VY+PG+++ S ++ GDV++V +
Sbjct: 106 ---NIQKQQHEAIVGAQCGNAVLRGAHVYIPGIVSASKFMKAGDVISVYSDI-------- 154
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
G +G++ F+ + +++G G + +SR IF +GI + M ++
Sbjct: 155 ------NGRCKKGAKE----FDGTKVFLGNGISEVSRKEIFSGLPELKGIGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF +VL G +FLQNLPS V H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A
Sbjct: 205 SPSFDNVLPGYLFLQNLPSAVVTHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+D+ NKV I+K A+ + L I + D KA++
Sbjct: 265 LDKIPNKVEKIKKNASLLKLHSIRAFCFDGTKALK 299
>gi|344277638|ref|XP_003410607.1| PREDICTED: putative methyltransferase NSUN6 [Loxodonta africana]
Length = 469
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 170/343 (49%), Gaps = 55/343 (16%)
Query: 11 PLLRWNPQVEEYFIRAY-------------GADHFSRISKALTRPSCYSCIRVNTLKTTT 57
P + P+VE Y + F + L+ P ++ +RVNT +
Sbjct: 5 PKISLRPEVENYLKEGFMNKEVITSLGKQEAERKFQTLLHHLSHPPSFTTVRVNTRLASV 64
Query: 58 DDVIQKLLAIIQNSGSSEADVASSVKGRLQNG-TISESQIPGLEYVVFVKGSGPHTIDYG 116
+ V LL +Q NG ++ Q P L+ V+ + GP
Sbjct: 65 EHVKNLLLDELQKQS---------------NGLSVPVLQHPDLQDVLLIPVIGPRK---- 105
Query: 117 YEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWG 176
K E IV +C AVLRGA VYVPG+++ S ++ GDV++V +
Sbjct: 106 -NIKKQQCEAIVGAQCGNAVLRGAHVYVPGIVSASKFMKAGDVISVYSDI---------- 154
Query: 177 LGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQLP 233
+G +G++ F+ + +++G G + +SR +F +GI + M ++ P
Sbjct: 155 ----KGKCKKGAKE----FDGTKVFLGNGISELSRKELFSGLPELKGIGIRMTEPVYLSP 206
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
SF +VL +FLQNLPS V AH L+PQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A+D
Sbjct: 207 SFDNVLPSYLFLQNLPSAVVAHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIALD 266
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPN 336
+ +KV I++ A +GL I + D KA++ + + E N
Sbjct: 267 KISSKVEKIKQNALLLGLNSIRAFCFDGTKALQIEMFEDTEGN 309
>gi|332217198|ref|XP_003257743.1| PREDICTED: putative methyltransferase NSUN6 [Nomascus leucogenys]
Length = 469
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 166/335 (49%), Gaps = 53/335 (15%)
Query: 8 SYSPLLRWNPQVEEYF---------IRAYGADH----FSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y + A G F + K L+ P ++ +RVNT
Sbjct: 2 SIFPKISLRPEVENYLKEGFMNKEIVTALGKQEAERKFETLLKHLSHPPSFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ V LL +Q + ++ Q P L+ V+ + GP
Sbjct: 62 ASVQHVKNLLLDELQK--------------QFNGLSVPILQHPDLQDVLLIPVIGPRK-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
K E IV +C AVLRGA VY PG+++ S ++ GDV++V +
Sbjct: 106 ---NIKKQQCEAIVGAQCGNAVLRGAHVYAPGIVSASKFMKAGDVISVYSDI-------- 154
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
+G +G++ F+ + +++G G + +SR IF +G+ + M ++
Sbjct: 155 ------KGKCKKGAKE----FDGTKVFLGNGISELSRKEIFSGLPELKGMGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF +VL +FLQNLPS + H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A
Sbjct: 205 SPSFDNVLPRYLFLQNLPSALVTHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+D+ NKV I++ A +GL I + D KAV+
Sbjct: 265 LDKIFNKVEKIKQNALLLGLNSIRAFCFDGTKAVK 299
>gi|90082132|dbj|BAE90347.1| unnamed protein product [Macaca fascicularis]
Length = 380
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 167/335 (49%), Gaps = 53/335 (15%)
Query: 8 SYSPLLRWNPQVEEYF---------IRAYGADH----FSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y + A G F + K L+ P ++ +RVNT
Sbjct: 2 SIFPKISLRPEVENYLKEGFVNKEIVTALGKQEAERKFETLLKHLSHPPSFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
T+ V LL +Q + ++ Q P L+ V+ + GP
Sbjct: 62 TSVQHVKNLLLDELQK--------------QFNGLSVPILQHPDLQDVLLIPVIGPRK-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
K E IV +C AVLRGA VY PG+++ S ++ GDV++V +
Sbjct: 106 ---NIKKQQCEAIVGAQCGNAVLRGAHVYAPGIVSASKFMKAGDVISVYSDI-------- 154
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
+G +G++ F+ + +++G G + +SR IF +G+ + M ++
Sbjct: 155 ------KGKCKKGARE----FDGTKVFLGNGISELSRKEIFNGLPELKGMGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF +VL +FLQNLPS + H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A
Sbjct: 205 SPSFDNVLPRYLFLQNLPSALVTHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+D+ +KV I++ A +GL I + D KAV+
Sbjct: 265 MDKIFSKVEKIKQNALLLGLNSIRAFCFDGTKAVK 299
>gi|297686139|ref|XP_002820622.1| PREDICTED: putative methyltransferase NSUN6 [Pongo abelii]
Length = 469
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 166/335 (49%), Gaps = 53/335 (15%)
Query: 8 SYSPLLRWNPQVEEYF---------IRAYGADH----FSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y + A G F + K L+ P ++ +RVNT
Sbjct: 2 SVFPKISLRPEVENYLKEGFMNKEIVTALGKQEAERKFETLLKHLSHPPSFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ V LL +Q + ++ Q P L+ V+ + GP
Sbjct: 62 ASVQHVKNLLLDELQK--------------QFNGLSVPILQHPDLQDVLLIPVIGPRK-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
K E IV +C AVLRGA VY PG+++ S ++ GDV++V +
Sbjct: 106 ---NIKKQQCEAIVGAQCGNAVLRGAHVYAPGIVSASKFMKAGDVISVYSDI-------- 154
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
+G +G++ F+ + +++G G + +SR IF +G+ + M ++
Sbjct: 155 ------KGKCKKGAKE----FDGTKVFLGNGISELSRKEIFSGLPELKGMGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF +VL +FLQNLPS + H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A
Sbjct: 205 SPSFDNVLPRYLFLQNLPSALVTHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+D+ NKV I++ A +GL I + D KAV+
Sbjct: 265 LDKIFNKVEKIKQNALLLGLNSIRAFCFDGTKAVK 299
>gi|380789539|gb|AFE66645.1| putative methyltransferase NSUN6 [Macaca mulatta]
Length = 469
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 167/335 (49%), Gaps = 53/335 (15%)
Query: 8 SYSPLLRWNPQVEEYF---------IRAYGADH----FSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y + A G F + K L+ P ++ +RVNT
Sbjct: 2 SIFPKISLRPEVENYLKEGFVNKEIVTALGKQEAERKFETLLKHLSHPPSFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
T+ V LL +Q + ++ Q P L+ V+ + GP
Sbjct: 62 TSVQHVKNLLLDELQK--------------QFNGLSVPILQHPDLQDVLLIPVIGPRK-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
K E IV +C AVLRGA VY PG+++ S ++ GDV++V +
Sbjct: 106 ---NIKKQQCEAIVGAQCGNAVLRGAHVYAPGIVSASKFMKAGDVISVYSDI-------- 154
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
+G +G++ F+ + +++G G + +SR IF +G+ + M ++
Sbjct: 155 ------KGKCKKGARE----FDGTKVFLGNGISELSRKEIFNGLPELKGMGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF +VL +FLQNLPS + H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A
Sbjct: 205 SPSFDNVLPRYLFLQNLPSALVTHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+D+ +KV I++ A +GL I + D KAV+
Sbjct: 265 MDKIFSKVEKIKQNALLLGLNSIRAFCFDGTKAVK 299
>gi|349602997|gb|AEP98964.1| Putative methyltransferase NSUN6-like protein, partial [Equus
caballus]
Length = 444
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 161/317 (50%), Gaps = 43/317 (13%)
Query: 32 FSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTI 91
F + L+ P ++ +RVNT + V LL +Q + ++
Sbjct: 14 FETLLNHLSHPPSFTTVRVNTHLASVQHVKNLLLDELQK--------------QFNGLSV 59
Query: 92 SESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACS 151
Q P L+ V+ + GP K E IV +C AVLRGA VYVPG+++ S
Sbjct: 60 PVLQHPDLQDVLLIPVIGPRK-----NIRKQQCEAIVGAQCGSAVLRGAHVYVPGIVSAS 114
Query: 152 SHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSR 211
++ GDV++V + +G +G++ F+ + +++G G + +SR
Sbjct: 115 KFMKAGDVISVYSDI--------------KGKCKRGAKE----FDGTKVFLGNGISELSR 156
Query: 212 AGIF---RASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDM 268
IF +G+ + M ++ PSF VL IFLQNLPS + H LDPQ GE+ILD+
Sbjct: 157 REIFSGLHELKGVGIRMTEPVYLSPSFDKVLPSCIFLQNLPSALATHVLDPQPGEKILDL 216
Query: 269 CAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR- 327
CAAPGGKTT IA+L+ D+GEV+A+D+ NKV I++ A +GL I + D KA++
Sbjct: 217 CAAPGGKTTHIAALMHDQGEVIALDKISNKVEKIKQNALLLGLNSIRAFCFDGTKALKLD 276
Query: 328 --KNESNDEPNMCNSKD 342
KN + P + S D
Sbjct: 277 MVKNTEGEPPFLPESFD 293
>gi|32698918|ref|NP_872349.1| putative methyltransferase NSUN6 [Homo sapiens]
gi|74751440|sp|Q8TEA1.1|NSUN6_HUMAN RecName: Full=Putative methyltransferase NSUN6; AltName:
Full=NOL1/NOP2/Sun and PUA domain-containing protein 1;
AltName: Full=NOL1/NOP2/Sun domain family member 6
gi|18676896|dbj|BAB85051.1| unnamed protein product [Homo sapiens]
gi|23272784|gb|AAH35778.1| NOL1/NOP2/Sun domain family, member 6 [Homo sapiens]
gi|119606597|gb|EAW86191.1| NOL1/NOP2/Sun domain family, member 6, isoform CRA_a [Homo sapiens]
gi|167887637|gb|ACA06032.1| NOL1/NOP2/Sun domain family, member 6 variant 1 [Homo sapiens]
gi|167887638|gb|ACA06033.1| NOL1/NOP2/Sun domain family, member 6 variant 2 [Homo sapiens]
gi|312150490|gb|ADQ31757.1| NOL1/NOP2/Sun domain family, member 6 [synthetic construct]
Length = 469
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 166/335 (49%), Gaps = 53/335 (15%)
Query: 8 SYSPLLRWNPQVEEYF---------IRAYGADH----FSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y + A G F + K L+ P ++ +RVNT
Sbjct: 2 SIFPKISLRPEVENYLKEGFMNKEIVTALGKQEAERKFETLLKHLSHPPSFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ V LL +Q + ++ Q P L+ V+ + GP
Sbjct: 62 ASVQHVKNLLLDELQK--------------QFNGLSVPILQHPDLQDVLLIPVIGPRK-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
K E IV +C AVLRGA VY PG+++ S ++ GDV++V +
Sbjct: 106 ---NIKKQQCEAIVGAQCGNAVLRGAHVYAPGIVSASQFMKAGDVISVYSDI-------- 154
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
+G +G++ F+ + +++G G + +SR IF +G+ + M ++
Sbjct: 155 ------KGKCKKGAKE----FDGTKVFLGNGISELSRKEIFSGLPELKGMGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF VL +FLQNLPS + +H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A
Sbjct: 205 SPSFDSVLPRYLFLQNLPSALVSHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+D+ NKV I++ A +GL I + D KAV+
Sbjct: 265 LDKIFNKVEKIKQNALLLGLNSIRAFCFDGTKAVK 299
>gi|260099664|ref|NP_001159415.1| putative methyltransferase NSUN6 isoform c [Mus musculus]
Length = 425
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 139/240 (57%), Gaps = 26/240 (10%)
Query: 90 TISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMA 149
+I Q P L V+ + +GP ++ EVIV +C AVLRGA VYVPG+++
Sbjct: 32 SIPVVQHPALPDVLLIPMTGPRK-----NIERQQGEVIVGAQCGNAVLRGAHVYVPGIVS 86
Query: 150 CSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMM 209
S ++ GDV++V + G +G++ F+ + +++G G + +
Sbjct: 87 ASKFMKAGDVISVYSDIN--------------GKCKKGAKE----FDGTKVFLGNGISEL 128
Query: 210 SRAGIFRAS---EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERIL 266
SR IF +GI + M I+ PSF +VL IFLQNLPS V AH LDPQ GE+IL
Sbjct: 129 SRKDIFNGLPDLKGIGIRMTEPIYLSPSFDNVLPSYIFLQNLPSTVVAHVLDPQPGEKIL 188
Query: 267 DMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
DMCAAPGGKTT A+L++D+GEV+A+D+ KV +++ A+ +GL I + DA KA++
Sbjct: 189 DMCAAPGGKTTHTAALMQDKGEVIALDKILTKVNKLKQNASLLGLHSIRAFCFDATKALK 248
>gi|426364103|ref|XP_004049161.1| PREDICTED: putative methyltransferase NSUN6 [Gorilla gorilla
gorilla]
Length = 469
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 166/335 (49%), Gaps = 53/335 (15%)
Query: 8 SYSPLLRWNPQVEEYF---------IRAYGADH----FSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y + A G F + K L+ P ++ +RVNT
Sbjct: 2 SIFPKISLRPEVENYLKEGFMNKEIVTALGKQEAERKFETLLKHLSHPPSFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ V LL +Q + ++ Q P L+ V+ + GP
Sbjct: 62 ASVQHVKNLLLDELQK--------------QFNGLSVPILQHPDLQDVLLIPVIGPRK-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
+ E IV +C AVLRGA VY PG+++ S ++ GDV++V +
Sbjct: 106 ---NIKRQQCEAIVGAQCGNAVLRGAHVYAPGIVSASKFMKAGDVISVYSDI-------- 154
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
+G +G++ F+ + +++G G + +SR IF +G+ + M ++
Sbjct: 155 ------KGKCKKGAKE----FDGTKVFLGNGISELSRKEIFSGLPELKGMGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF VL +FLQNLPS + +H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A
Sbjct: 205 SPSFDSVLPRYLFLQNLPSALVSHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+D+ NKV I++ A +GL I + D KAV+
Sbjct: 265 LDKIFNKVEKIKQNALLLGLNSIRAFCFDGTKAVK 299
>gi|301783221|ref|XP_002927025.1| PREDICTED: putative methyltransferase NSUN6-like [Ailuropoda
melanoleuca]
Length = 469
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 159/314 (50%), Gaps = 40/314 (12%)
Query: 16 NPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSE 75
N ++ F + F + L+ P ++ +RVNT + V L +Q S
Sbjct: 23 NKEIVSAFGKQAAERKFEILLNHLSHPPSFTTVRVNTHLASVQHVKDLLFDELQKQFSGL 82
Query: 76 ADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEA 135
+ Q P L+ V+ + GP K E IV +C A
Sbjct: 83 --------------NVPILQHPDLQDVLLIPVIGPRK-----NIKKQRCEAIVGAQCGNA 123
Query: 136 VLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYF 195
VLRGA VYVPG+++ S ++ GD+++V + +G +G++ F
Sbjct: 124 VLRGAHVYVPGIVSASKFMKAGDLISVYSDI--------------KGKCKKGAKE----F 165
Query: 196 ERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIV 252
+ + +++G G + +SR IF +GI + M ++ PSF +VL +FLQNLPS V
Sbjct: 166 DGTKVFLGNGISELSRKEIFSGLPELKGIGIRMIEPVYLSPSFDNVLPSYLFLQNLPSAV 225
Query: 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312
H L+PQ GE+ILD+CAAPGGKTT IA+L+RD+GEV+A+D+ NKV I++ A +GL
Sbjct: 226 VTHVLNPQPGEKILDLCAAPGGKTTHIAALMRDQGEVIALDKIPNKVEKIKQNALLLGLN 285
Query: 313 CITTYKLDALKAVR 326
I + D KA++
Sbjct: 286 SIKAFCFDGTKALQ 299
>gi|359318915|ref|XP_003638939.1| PREDICTED: putative methyltransferase NSUN6-like [Canis lupus
familiaris]
Length = 469
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 158/314 (50%), Gaps = 40/314 (12%)
Query: 16 NPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSE 75
N +V F + F + L+ P ++ +RVNT + V L +Q
Sbjct: 23 NKEVISAFGKQEAERKFEALLNHLSHPPSFTTVRVNTHLASVQQVKDLLFHELQK----- 77
Query: 76 ADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEA 135
+ ++ Q P L+ V+ + GP + E IV +C A
Sbjct: 78 ---------QFNGLSVPILQHPDLQDVLLIPVIGPRK-----NIKRQRCEAIVGAQCGNA 123
Query: 136 VLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYF 195
VLRGA VYVPG+++ S ++ GDV +V + +G +G++ F
Sbjct: 124 VLRGAHVYVPGIVSTSKFMKAGDVTSVYSDI--------------KGKCKKGAKE----F 165
Query: 196 ERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIV 252
+ + +++G G + +SR IF +G + M ++ PSF +VL +FLQNLPS V
Sbjct: 166 DGTKVFLGNGISELSRKEIFSGVPELKGRGIRMTEPVYLSPSFDNVLPRYLFLQNLPSAV 225
Query: 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312
H LDPQ GE+ILD+CAAPGGKTT IA+L+RD+GEV+A+D+ NKV I++ A +GL
Sbjct: 226 VTHVLDPQPGEKILDLCAAPGGKTTHIAALMRDQGEVIALDKISNKVEKIKQNALLLGLN 285
Query: 313 CITTYKLDALKAVR 326
I + D KA++
Sbjct: 286 SIKAFCFDGTKALK 299
>gi|346467711|gb|AEO33700.1| hypothetical protein [Amblyomma maculatum]
Length = 427
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 158/311 (50%), Gaps = 38/311 (12%)
Query: 28 GADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQ 87
G S + L+ P Y+ +RVNT T+ +D K+L + ++ S D+A V
Sbjct: 46 GKSRLSHLKSWLSLPPQYTTVRVNTRDTSVEDA--KIL-LQRSMTESHGDLAPEV----- 97
Query: 88 NGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGV 147
I IP L + + S +P +EV+V R CAEAVLRGA VY+PG+
Sbjct: 98 ---ICHPSIPDLLILSGRQSSA------NLQPTL--REVVVRRDCAEAVLRGAHVYIPGI 146
Query: 148 MACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTA 207
M ++ G VAV G G L+G +T PY R +++G G A
Sbjct: 147 MGAPKGLQAGQQVAV--------------YGDLDGQCLKG-RTRPYRGRR--VFVGNGIA 189
Query: 208 MMSRAGIF--RASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERI 265
++SRA IF + SEG AV M + P + +FLQNLPS + H LDP+ G+ +
Sbjct: 190 VVSRADIFVKQVSEGCAVRMTEPVSGCPPLGGLEPSRLFLQNLPSALCGHILDPKPGDAV 249
Query: 266 LDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325
LDMCAAPGGKTT +A+L+ D G VVA+DRS N+V ++ + C+ ++ DA +
Sbjct: 250 LDMCAAPGGKTTHLATLMNDTGLVVALDRSENRVARVRNNCERWKISCVRSFAHDANEFD 309
Query: 326 RRKNESNDEPN 336
+ D PN
Sbjct: 310 SLPQQGIDLPN 320
>gi|395827249|ref|XP_003786817.1| PREDICTED: putative methyltransferase NSUN6 isoform 1 [Otolemur
garnettii]
Length = 469
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 165/335 (49%), Gaps = 53/335 (15%)
Query: 8 SYSPLLRWNPQVEEYF---------IRAYGADH----FSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y I A G F + L+ P ++ +RVNT
Sbjct: 2 SVFPKISLRPEVENYLKEGFVNKEVISALGKQEAEKKFETLLYHLSHPPSFTTVRVNTNL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
T+ V LL +K + T+ Q P L ++ + GP
Sbjct: 62 TSVQHVKNLLL--------------DELKKQFNGLTVPILQHPDLRDILLIPVIGPRKNI 107
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
+ E +V +C AVLRGA VYVPG+++ S ++ GDV++V +
Sbjct: 108 QNQQ-----CEAVVGAQCGNAVLRGAHVYVPGIVSASKFMKSGDVISVYSDI-------- 154
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
+G +G++ F+ + +++G G + +SR +F GI + M ++
Sbjct: 155 ------KGECKKGAKE----FDGTKVFLGNGISEVSRKELFSGLPQLRGIGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF +VL +FLQNLPS + +H L+PQ GE ILD+CAAPGGKTT IA+L++D+G V+A
Sbjct: 205 SPSFDNVLPSYLFLQNLPSALVSHVLNPQPGEMILDLCAAPGGKTTHIAALMQDQGVVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+D+ NKV I++ A +GL I + D KAV+
Sbjct: 265 LDKIFNKVEKIKQNALLLGLNSIRAFCFDGTKAVK 299
>gi|327274719|ref|XP_003222124.1| PREDICTED: putative methyltransferase NSUN6-like [Anolis
carolinensis]
Length = 430
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 155/290 (53%), Gaps = 40/290 (13%)
Query: 39 LTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPG 98
L+ P ++ +RVNT + + + L I +S ++ Q P
Sbjct: 28 LSHPPAFTTVRVNTYLASVEHIRGLLCEEIHKQYASL--------------SVPVLQHPQ 73
Query: 99 LEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGD 158
L ++ + GP + K E IV +C AVLRGA VY PG+++ S + GD
Sbjct: 74 LPDILLIPVIGPRK-----DLQKLANEAIVGAQCGSAVLRGAHVYAPGIVSASKFMRAGD 128
Query: 159 VVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS 218
+V+V +E G +G++ F + ++IG G + +SR+ IF ++
Sbjct: 129 LVSVYSDIE--------------GKCKRGAKE----FLGTKVFIGNGISELSRSEIFNSN 170
Query: 219 ---EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGK 275
+G+ + M I+ PSF ++L +FLQNLPS V ++ L+PQ GERILDMCAAPGGK
Sbjct: 171 GPLKGLGIKMIEPIYLSPSFDNLLPSYLFLQNLPSAVVSYVLNPQPGERILDMCAAPGGK 230
Query: 276 TTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325
TT +A+L+ DEGEV+A+D+ +KV I++ A+ + L CI T+ D KA+
Sbjct: 231 TTHLATLMHDEGEVIALDKIADKVKKIKQNASSLKLNCIKTFCYDGTKAL 280
>gi|355708097|gb|AES03162.1| NOL1/NOP2/Sun domain family, member 6 [Mustela putorius furo]
Length = 437
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 162/326 (49%), Gaps = 43/326 (13%)
Query: 32 FSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTI 91
F + L+ P ++ +RVN + V L +Q + +
Sbjct: 7 FETLLNRLSHPPSFTTVRVNIHLASVQHVKDLLFDELQK--------------QFNGLNV 52
Query: 92 SESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACS 151
Q P L+ V+ + GP K E IV +C AVLRGA VYVPG+++ S
Sbjct: 53 PILQHPDLQDVLLIPVIGPRK-----NIKKQHCEAIVGAQCGNAVLRGAHVYVPGIVSAS 107
Query: 152 SHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSR 211
++ GDV+++ + +G +G++ F+ + +++G G + +SR
Sbjct: 108 KFMKAGDVISIYSDI--------------KGKCKKGAKE----FDGTKVFLGNGISELSR 149
Query: 212 AGIFRAS---EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDM 268
IF +GI + M I+ PSF +VL +FLQNLPS V AH LDPQ GE+ILD+
Sbjct: 150 KEIFSGVPELKGIGIRMTEPIYLSPSFDNVLPSYLFLQNLPSAVVAHVLDPQPGEKILDL 209
Query: 269 CAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR- 327
CAAPGGKTT IA+L+ D+GEV+A+D+ KV I++ A +GL I + D KA++
Sbjct: 210 CAAPGGKTTHIAALMHDQGEVIALDKISKKVEKIKQNALLLGLNSIKAFCFDGTKALKLD 269
Query: 328 --KNESNDEPNMCNSKDNNYITSQTS 351
K+ P + +S D + + S
Sbjct: 270 MVKDAEGKPPFLPDSFDRILLDAPCS 295
>gi|348503686|ref|XP_003439395.1| PREDICTED: LOW QUALITY PROTEIN: putative methyltransferase
NSUN6-like [Oreochromis niloticus]
Length = 474
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 176/336 (52%), Gaps = 40/336 (11%)
Query: 8 SYSPLLRWNPQVEEYF---------IRAYG---ADH-FSRISKALTRPSCYSCIRVNTLK 54
S P + P+V EY + A G A+H F ++ L+ P Y+C+R +T
Sbjct: 2 SIFPRISLKPEVTEYLKSVFLNKEVLTAVGHQEAEHRFHKLLSCLSHPPSYTCVRASTHL 61
Query: 55 TTTDDVIQKLLAII--QNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHT 112
+++ Q+L + Q SS +V+ + L + I++ I +E + + + ++
Sbjct: 62 APLEEIRQRLAEELRKQMCSSSAEEVSVQI---LPHPRIADVLILPVEGPRYARNASDNS 118
Query: 113 IDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLD 172
+ EV+V +C AVLRGA V+ PG++ +++ GD+V+V +E
Sbjct: 119 XS-ALPVKQLSSEVVVGAQCGSAVLRGAHVFAPGILGSPKYMKAGDLVSVFSDLE----- 172
Query: 173 GGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASE---GIAVDMHNRI 229
G +G+ + F+ +++G G A M R+ IF E GI + M +
Sbjct: 173 ---------GRCTRGATS----FQGKKVFVGNGVAEMDRSTIFCTDEPARGIGIRMVEPL 219
Query: 230 FQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEV 289
++ PSF VL +FLQNLPS+V H L P+ GERILDMCAAPGGKT IA+L+ D+GEV
Sbjct: 220 YRSPSFDGVLPSLVFLQNLPSVVVGHVLGPRPGERILDMCAAPGGKTCHIAALMGDQGEV 279
Query: 290 VAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325
VA+DR NK+ I++ A + L+ + + ++ +AV
Sbjct: 280 VALDRIRNKIDRIRQNAQMLHLQSVQAHCFNSTQAV 315
>gi|395827251|ref|XP_003786818.1| PREDICTED: putative methyltransferase NSUN6 isoform 2 [Otolemur
garnettii]
Length = 381
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 165/335 (49%), Gaps = 53/335 (15%)
Query: 8 SYSPLLRWNPQVEEYF---------IRAYGADH----FSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y I A G F + L+ P ++ +RVNT
Sbjct: 2 SVFPKISLRPEVENYLKEGFVNKEVISALGKQEAEKKFETLLYHLSHPPSFTTVRVNTNL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
T+ V LL +K + T+ Q P L ++ + GP
Sbjct: 62 TSVQHVKNLLL--------------DELKKQFNGLTVPILQHPDLRDILLIPVIGPRKNI 107
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
+ E +V +C AVLRGA VYVPG+++ S ++ GDV++V +
Sbjct: 108 QNQQ-----CEAVVGAQCGNAVLRGAHVYVPGIVSASKFMKSGDVISVYSDI-------- 154
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
+G +G++ F+ + +++G G + +SR +F GI + M ++
Sbjct: 155 ------KGECKKGAKE----FDGTKVFLGNGISEVSRKELFSGLPQLRGIGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF +VL +FLQNLPS + +H L+PQ GE ILD+CAAPGGKTT IA+L++D+G V+A
Sbjct: 205 SPSFDNVLPSYLFLQNLPSALVSHVLNPQPGEMILDLCAAPGGKTTHIAALMQDQGVVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+D+ NKV I++ A +GL I + D KAV+
Sbjct: 265 LDKIFNKVEKIKQNALLLGLNSIRAFCFDGTKAVK 299
>gi|426240849|ref|XP_004014306.1| PREDICTED: putative methyltransferase NSUN6 [Ovis aries]
Length = 408
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 161/317 (50%), Gaps = 43/317 (13%)
Query: 32 FSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTI 91
F + L+ P ++ +RVNT + V L +Q + +
Sbjct: 39 FETLLHNLSHPPSFTTVRVNTHLASVQHVKNLLFDELQK--------------QFNGLSF 84
Query: 92 SESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACS 151
Q P L+ V+ + GP + P EVIV +C AVLRGA VYVPG+++ S
Sbjct: 85 PILQHPDLQDVLLIPVIGPRK-----NIKQQPCEVIVGAQCGNAVLRGAHVYVPGIVSAS 139
Query: 152 SHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSR 211
++ GD V+V + +G +G++ F+ + +++G G + +SR
Sbjct: 140 KFMKGGDHVSVYSDI--------------KGKCKKGAKE----FDGTKIFLGNGISELSR 181
Query: 212 AGIFRAS---EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDM 268
IF +G+ V M ++ PSF +VL +FLQNLPS V +H LDPQ GE++LD+
Sbjct: 182 KEIFSGLPELKGVGVRMTEPVYLSPSFDNVLPNYLFLQNLPSAVVSHVLDPQPGEKVLDL 241
Query: 269 CAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR- 327
CAAPGGKTT IA+L+ D+GEV+A+D+ KV I++ A +GL I + D KA++
Sbjct: 242 CAAPGGKTTHIAALMCDQGEVIALDKISKKVEKIKQNALLLGLNSIRAFCFDGTKALKLD 301
Query: 328 --KNESNDEPNMCNSKD 342
K+ + P + S D
Sbjct: 302 MVKDTDGEPPFLPESFD 318
>gi|440909187|gb|ELR59124.1| Putative methyltransferase NSUN6, partial [Bos grunniens mutus]
Length = 470
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 160/317 (50%), Gaps = 43/317 (13%)
Query: 32 FSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTI 91
F + L+ P ++ +RVNT + V L +Q + +
Sbjct: 39 FETLLHNLSHPPSFTTVRVNTHLASVQHVKNLLFDELQK--------------QFNGLSF 84
Query: 92 SESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACS 151
Q P L+ V+ + GP + EVIV +C AVLRGA VYVPG+++ S
Sbjct: 85 PVLQHPDLQDVLLIPVIGPRK-----NIKQQTCEVIVGAQCGSAVLRGAHVYVPGIVSAS 139
Query: 152 SHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSR 211
++ GD V+V + +G +G++ F+ + +++G G + +SR
Sbjct: 140 KFMKGGDDVSVYSDI--------------KGKCKKGAKE----FDGTKIFLGNGISELSR 181
Query: 212 AGIFRAS---EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDM 268
IF +G+ V M ++ PSF +VL +FLQNLPS V +H LDPQ GE+ILD+
Sbjct: 182 KEIFSGLPELKGVGVRMTEPVYLSPSFDNVLPSYLFLQNLPSAVVSHVLDPQPGEKILDL 241
Query: 269 CAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR- 327
CAAPGGKTT IA+L+ D+GEV+A+D+ KV I++ A +GL I + D KA++
Sbjct: 242 CAAPGGKTTHIAALMHDQGEVIALDKISKKVEKIKQNALLLGLNSIRAFCFDGTKALKLD 301
Query: 328 --KNESNDEPNMCNSKD 342
K+ + P + S D
Sbjct: 302 MVKDTDGEPPFLPESFD 318
>gi|114629648|ref|XP_507683.2| PREDICTED: putative methyltransferase NSUN6 isoform 3 [Pan
troglodytes]
gi|410209552|gb|JAA01995.1| NOP2/Sun domain family, member 6 [Pan troglodytes]
gi|410259322|gb|JAA17627.1| NOP2/Sun domain family, member 6 [Pan troglodytes]
Length = 469
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 159/335 (47%), Gaps = 53/335 (15%)
Query: 8 SYSPLLRWNPQVEEYFIRAY-------------GADHFSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y + F + K L+ P ++ +RVNT
Sbjct: 2 SIFPKISLRPEVENYLKEGFMNKEIVTALGKPEAERKFETLLKHLSHPPSFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ V LL +Q + ++ Q P L+ V+ + GP
Sbjct: 62 ASVQHVKNLLLDELQK--------------QFNGLSVPILQHPDLQDVLLIPVIGPRK-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
K E IV +C AVLRGA VY PG+++ S ++ GDV++V
Sbjct: 106 ---NIKKQQCEAIVGAQCGNAVLRGAHVYAPGIVSASKFMKTGDVISV------------ 150
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
+ + F+ + +++G G + +SR IF +G+ + M ++
Sbjct: 151 ------YSDIKGKCKKGAKKFDGTKVFLGNGISELSRKEIFSGLPELKGMGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF VL +FLQNLPS + +H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A
Sbjct: 205 SPSFDSVLPRYLFLQNLPSALVSHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+D+ NKV I++ A +GL I + D KAV+
Sbjct: 265 LDKIFNKVEKIKQNALLLGLNSIRAFCFDGTKAVK 299
>gi|397480441|ref|XP_003811492.1| PREDICTED: putative methyltransferase NSUN6 [Pan paniscus]
Length = 469
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 159/335 (47%), Gaps = 53/335 (15%)
Query: 8 SYSPLLRWNPQVEEYFIRAY-------------GADHFSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y + F + K L+ P ++ +RVNT
Sbjct: 2 SIFPKISLRPEVENYLKEGFMNKEIVTALGKPEAERKFETLLKHLSHPPSFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ V LL +Q + ++ Q P L+ V+ + GP
Sbjct: 62 ASVQHVKNLLLDELQK--------------QFNGLSVPILQHPDLQDVLLIPVIGPRK-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
K E IV +C AVLRGA VY PG+++ S ++ GDV++V
Sbjct: 106 ---NIKKQQCEAIVGAQCGNAVLRGAHVYAPGIVSASKFMKAGDVISV------------ 150
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
+ + F+ + +++G G + +SR IF +G+ + M ++
Sbjct: 151 ------YSDIKGKCKKGAKKFDGTKVFLGNGISELSRKEIFSGLPELKGMGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF VL +FLQNLPS + +H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+GEV+A
Sbjct: 205 SPSFDSVLPRYLFLQNLPSALVSHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIA 264
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+D+ NKV I++ A +GL I + D KAV+
Sbjct: 265 LDKIFNKVEKIKQNALLLGLNSIRAFCFDGTKAVK 299
>gi|139948562|ref|NP_001077139.1| putative methyltransferase NSUN6 [Bos taurus]
gi|134024543|gb|AAI34425.1| NSUN6 protein [Bos taurus]
Length = 408
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 160/317 (50%), Gaps = 43/317 (13%)
Query: 32 FSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTI 91
F + L+ P ++ +RVNT + V L +Q + +
Sbjct: 39 FETLLHNLSHPPSFTTVRVNTHLASVQHVKNLLFDELQK--------------QFNGLSF 84
Query: 92 SESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACS 151
Q P L+ V+ + GP + EVIV +C AVLRGA VYVPG+++ S
Sbjct: 85 PVLQHPDLQDVLLIPVIGPRK-----NIKQQTCEVIVGAQCGSAVLRGAHVYVPGIVSAS 139
Query: 152 SHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSR 211
++ GD V+V + +G +G++ F+ + +++G G + +SR
Sbjct: 140 KFMKGGDDVSVYSDI--------------KGKCKKGAKE----FDGTKIFLGNGISELSR 181
Query: 212 AGIFRAS---EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDM 268
IF +G+ V M ++ PSF +VL +FLQNLPS V +H LDPQ GE+ILD+
Sbjct: 182 KEIFSGLPELKGVGVRMTEPVYLSPSFDNVLPSYLFLQNLPSAVVSHVLDPQPGEKILDL 241
Query: 269 CAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR- 327
CAAPGGKTT IA+L+ D+GEV+A+D+ KV I++ A +GL I + D KA++
Sbjct: 242 CAAPGGKTTHIAALMHDQGEVIALDKISKKVEKIKQNALLLGLNSIRAFCFDGTKALKLD 301
Query: 328 --KNESNDEPNMCNSKD 342
K+ + P + S D
Sbjct: 302 MVKDTDGEPPFLPESFD 318
>gi|296481451|tpg|DAA23566.1| TPA: NOL1/NOP2/Sun domain family, member 6 [Bos taurus]
Length = 408
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 160/317 (50%), Gaps = 43/317 (13%)
Query: 32 FSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTI 91
F + L+ P ++ +RVNT + V L +Q + +
Sbjct: 39 FETLLHNLSHPPSFTTVRVNTHLASVQHVKNLLFDELQK--------------QFNGLSF 84
Query: 92 SESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACS 151
Q P L+ V+ + GP + EVIV +C AVLRGA VYVPG+++ S
Sbjct: 85 PVLQHPDLQDVLLIPVIGPRK-----NIKQQTCEVIVGAQCGSAVLRGAHVYVPGIVSAS 139
Query: 152 SHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSR 211
++ GD V+V + +G +G++ F+ + +++G G + +SR
Sbjct: 140 KFMKGGDDVSVYSDI--------------KGKCKKGAKE----FDGTKIFLGNGISELSR 181
Query: 212 AGIFRAS---EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDM 268
IF +G+ V M ++ PSF +VL +FLQNLPS V +H LDPQ GE+ILD+
Sbjct: 182 KEIFSGLPELKGVGVRMTEPVYLSPSFDNVLPSYLFLQNLPSAVVSHVLDPQPGEKILDL 241
Query: 269 CAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR- 327
CAAPGGKTT IA+L+ D+GEV+A+D+ KV I++ A +GL I + D KA++
Sbjct: 242 CAAPGGKTTHIAALMHDQGEVIALDKISKKVEKIKQNALLLGLNSIRAFCFDGTKALKLD 301
Query: 328 --KNESNDEPNMCNSKD 342
K+ + P + S D
Sbjct: 302 MVKDTDGEPPFLPESFD 318
>gi|240978967|ref|XP_002403084.1| conserved hypothetical protein [Ixodes scapularis]
gi|215491291|gb|EEC00932.1| conserved hypothetical protein [Ixodes scapularis]
Length = 337
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 168/321 (52%), Gaps = 51/321 (15%)
Query: 16 NPQVEEYFIR----------AYGAD-HFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKL 64
PQVEE + A GAD + ++ + L+RP Y+ +RVNT +T+ V Q
Sbjct: 38 QPQVEEQLLAELRASCGQDDASGADERWRQLRRWLSRPPLYTTVRVNTRRTS---VGQAR 94
Query: 65 LAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFV--KGSGPHTIDYGYEPDKP 122
+A+ ++ G+S + + L P L+ ++ V + H +
Sbjct: 95 VAVQEHLGTSHVRLGEAPLVLLH---------PCLDELLLVVSRQCRAHVVPSS------ 139
Query: 123 PKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRG 182
+EV+V C +AVLRGA V+VPGV+ +E G+ VAV +E G
Sbjct: 140 -REVVVDADCGQAVLRGAHVFVPGVLGAPKGLEAGERVAVFADLE--------------G 184
Query: 183 TVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIF--RASEGIAVDMHNRIFQLPSFYDVLE 240
+ L+G PY ER+ ++G GTA++SR IF + + G+AV M +F P ++
Sbjct: 185 SCLRG-YARPYRGERA--FLGNGTALVSRRDIFVSQLARGVAVRMTEPLFGCPPLNGLMT 241
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
+ LQNLPS++ AL P+ GE +LDMCAAPGGKTT +A+L+ D G +VA+DR+ +++
Sbjct: 242 ETLLLQNLPSVLCGRALGPRPGESVLDMCAAPGGKTTHLATLMDDTGLLVALDRAESRLS 301
Query: 301 DIQKLAAEMGLKCITTYKLDA 321
++ L GL C+ + DA
Sbjct: 302 RVRALCDLWGLSCVRAHAHDA 322
>gi|326669730|ref|XP_001919347.3| PREDICTED: putative methyltransferase NSUN6-like [Danio rerio]
Length = 462
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 165/332 (49%), Gaps = 54/332 (16%)
Query: 11 PLLRWNPQVEEYFIRAYGAD-------------HFSRISKALTRPSCYSCIRVNTLKTTT 57
P L +P+V E+ Y D F + L+ P Y+C+RV+T
Sbjct: 5 PQLSMSPEVREHLHTVYTNDEAVCELGAGVAEQQFEALLWCLSHPPLYTCLRVSTHLHPL 64
Query: 58 DDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGY 117
DV +L ++ ++Q + P L V+ + GP +I
Sbjct: 65 RDVQHRLQQHLE---------------QIQCRCPAVHTHPELPDVLLLPVCGPRSI---- 105
Query: 118 EPDKP-PKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWG 176
+P +P VIV +C AVLRGA V+ PG+++ ++ GDVV+V VE
Sbjct: 106 QPVEPVASAVIVGSQCGSAVLRGAHVFTPGIISTHKFMKAGDVVSVFSDVEG-------- 157
Query: 177 LGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIF---RASEGIAVDMHNRIFQLP 233
TRG F +++G G + ++R+ +F + G+A+ M ++Q P
Sbjct: 158 -KCTRGAT---------EFNGKKVFVGNGVSEVNRSELFSSDKPGRGLAIRMTEPLYQSP 207
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
SF VL E+FLQNLPS+V + L P+ GER+LDMCAAPGGKTT IASL+ ++G VVA++
Sbjct: 208 SFDGVLTDELFLQNLPSVVVGYVLGPRPGERVLDMCAAPGGKTTHIASLMGNQGVVVALE 267
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325
+ +K+ I + A + L CI Y +++ AV
Sbjct: 268 KVRSKMEKILRNAQMLKLDCIKAYCCNSIHAV 299
>gi|326429758|gb|EGD75328.1| Nsun6 protein [Salpingoeca sp. ATCC 50818]
Length = 477
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 153/312 (49%), Gaps = 44/312 (14%)
Query: 19 VEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADV 78
+EE + R+ F+ + + L P ++C+R+NTL T ++ IQ L
Sbjct: 35 LEEVWDRSASGQRFADLCERLAIPPAHTCLRINTLVNTREEAIQTLAR------------ 82
Query: 79 ASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLR 138
L+ Q P L+ V+ + GP + PDK V+V C AVLR
Sbjct: 83 ------ELEGTDYKFEQHPKLDDVLILPAIGPRRV----VPDKEGLFVVVDAACGAAVLR 132
Query: 139 GAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERS 198
G+ V+VPG+ ACSS V G VAV V + G L P ER+
Sbjct: 133 GSDVFVPGIRACSSGVHSGARVAVYADVHKACSTGQTKL--------------PPAEERA 178
Query: 199 G---LYIGQGTAMMSRAGIFRASE----GIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSI 251
+++G G A RA +FR+S+ G+ V+M + FQ P L+ + LQNLPS
Sbjct: 179 AKKIVFVGNGIAHFDRADVFRSSDAVTSGLGVEMGDIEFQTPCLGH-LDRSLVLQNLPSC 237
Query: 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311
V +H L PQ GE ++DMCAAPGGKT IA+L+ + G + A +RS + + + +G+
Sbjct: 238 VASHVLAPQPGEHVVDMCAAPGGKTAHIAALMNNTGRITAYERSTKRCAALVQWLETVGV 297
Query: 312 KCITTYKLDALK 323
C + +K+DA K
Sbjct: 298 TCCSVFKMDARK 309
>gi|391330884|ref|XP_003739882.1| PREDICTED: putative methyltransferase NSUN6-like [Metaseiulus
occidentalis]
Length = 441
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 37/310 (11%)
Query: 7 YSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLA 66
+ + R V ++ F R+ + L P Y+ +RVNTL+TT D +KL A
Sbjct: 5 FKNCSVFRKQKDVADFLASQNAPGEFERLERWLAVPPQYTVLRVNTLRTTISDAKEKLRA 64
Query: 67 IIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEV 126
+ S NG+ + P L+ + V + + P + +++
Sbjct: 65 YVDKCARS-------------NGSYVVLEHPQLDDTLIVVSP---KVPVSFAPCR--RQL 106
Query: 127 IVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQ 186
IV +C EAVLRGA VY+PGV+A + +GD+VAV V+Q TRG
Sbjct: 107 IVGLECGEAVLRGANVYIPGVLAAPGGLREGDMVAVYADVDQ---------KCTRGL--- 154
Query: 187 GSQTDPYYFERSGLYIGQGTAMMSRAGIFR--ASEGIAVDMHNRIFQLPSFYDVLEGEIF 244
++ +++G G AM+SR IF+ + GIAV++ I Q P + +
Sbjct: 155 -----KRWYTGEKMFVGNGRAMVSRDEIFKNNVNSGIAVEVTQPIQQCPPLNRIHPEIMT 209
Query: 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304
LQNLPS+V A LDPQ G+ +LDMC+APGGKTT +A+L+++ G V+A+D++ ++ ++
Sbjct: 210 LQNLPSVVCAKVLDPQPGQTVLDMCSAPGGKTTHLATLMKNTGTVIALDKAGARLEKTRE 269
Query: 305 LAAEMGLKCI 314
L C+
Sbjct: 270 KCELWNLTCV 279
>gi|224082580|ref|XP_002306751.1| predicted protein [Populus trichocarpa]
gi|222856200|gb|EEE93747.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/123 (63%), Positives = 95/123 (77%), Gaps = 12/123 (9%)
Query: 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
LDPQKGERILDMCAAPGGKTTAIA L++DEGE+VA+DRSHNKV DIQKLAAEM L CITT
Sbjct: 3 LDPQKGERILDMCAAPGGKTTAIAILMKDEGELVALDRSHNKVQDIQKLAAEMSLTCITT 62
Query: 317 YKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKE-VPSIAAEGLNGDKSCK 375
YKLD LKA+R++NE++D T+Q+S+S+ H+E S AEG N DK+C+
Sbjct: 63 YKLDVLKAIRQRNEADD-----------INTNQSSNSLWFHEEKASSSTAEGFNLDKTCE 111
Query: 376 EKG 378
+ G
Sbjct: 112 DNG 114
>gi|328869535|gb|EGG17913.1| NOL1/NOP2/Sun family protein [Dictyostelium fasciculatum]
Length = 507
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 160/314 (50%), Gaps = 52/314 (16%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
V ++ + YG DH + I KA RP ++ IRVNT K ++ +L +
Sbjct: 67 NVLDHLEKYYGKDHMNAIRKAQVRPPTFTTIRVNTSKCDRPHLLNQLRPYFE-------- 118
Query: 78 VASSVKGRLQNGTI-----------SESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEV 126
S++ +LQ+ I +E+ + +K GP + P K+V
Sbjct: 119 ---SIQFKLQDNNIIPFSNLVKEDTNETIQSITNQTILLKNHGP------FNPQPKYKQV 169
Query: 127 IVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQ 186
+V CAEAVLRG+ ++ PG++ H+ +GD+V+V V + Q DG RG ++
Sbjct: 170 VVGVLCAEAVLRGSDIFAPGIIGSFKHIVEGDMVSVFVDLSQ---DG------KRGFIID 220
Query: 187 GSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQ 246
G YY ER+ +++G G ++M+R + G+ + M RI+ P VL ++FLQ
Sbjct: 221 G-----YYAERT-VFVGNGVSLMNRLDYYSTRGGVGIKMTERIWDCPPLNGVLTDKLFLQ 274
Query: 247 NLPSIVTAHALD--PQKGER----ILDMCAAPGGKTTAIASLLRDEG---EVVAVDRSHN 297
+LPSI+T +D P + E+ ILDMCAAPGGKTT IASL+++ G ++ A+D++
Sbjct: 275 HLPSILTVFQMDLLPSQREKRSFNILDMCAAPGGKTTLIASLVKNNGLGDKITAIDKNKK 334
Query: 298 KVMDIQKLAAEMGL 311
K + L G
Sbjct: 335 KAKMVSDLCRVNGF 348
>gi|19344072|gb|AAH25622.1| Nsun6 protein [Mus musculus]
Length = 362
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 123/201 (61%), Gaps = 21/201 (10%)
Query: 129 SRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGS 188
S +C AVLRGA VYVPG+++ S ++ GDV++V + G +G+
Sbjct: 3 SAQCGNAVLRGAHVYVPGIVSASKFMKAGDVISVYSDI--------------NGKCKKGA 48
Query: 189 QTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQLPSFYDVLEGEIFL 245
+ F+ + +++G G + +SR IF +GI + M I+ PSF +VL IFL
Sbjct: 49 KE----FDGTKVFLGNGISELSRKDIFNGLPDLKGIGIRMTEPIYLSPSFDNVLPSYIFL 104
Query: 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKL 305
QNLPS V AH LDPQ GE+ILDMCAAPGGKTT A+L++D+GEV+A+D+ KV +++
Sbjct: 105 QNLPSTVVAHVLDPQPGEKILDMCAAPGGKTTHTAALMQDKGEVIALDKILTKVNKLKQN 164
Query: 306 AAEMGLKCITTYKLDALKAVR 326
A+ +GL I + DA KA++
Sbjct: 165 ASLLGLHSIRAFCFDATKALK 185
>gi|410909259|ref|XP_003968108.1| PREDICTED: putative methyltransferase NSUN6-like [Takifugu
rubripes]
Length = 471
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 162/308 (52%), Gaps = 48/308 (15%)
Query: 32 FSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLA-IIQNSGSSEADVASSVKGRLQNGT 90
F ++ + L+ P Y+C+R +T +++ KL + + G A+ AS LQ
Sbjct: 39 FQKLLRCLSHPPSYTCVRASTHLAPLEEIRLKLAEELAKQMGQCSAEEAS-----LQ--I 91
Query: 91 ISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPK---------EVIVSRKCAEAVLRGAQ 141
++ IP V+ + GP YE + P+ EV+V +C AVLRGA
Sbjct: 92 LTHPHIPD---VLLLPVDGPR-----YERNTKPECLHVEQVSSEVVVGAQCGSAVLRGAH 143
Query: 142 VYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRG-TVLQGSQTDPYYFERSGL 200
V+ PG++A +++ GDVV+V +E TRG T QG +
Sbjct: 144 VFAPGIVASPKYMKAGDVVSVFSDLEG---------RCTRGATSFQGKRA---------- 184
Query: 201 YIGQGTAMMSRAGIFRASE---GIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHAL 257
++G G A M R+ +F + E G+ V M ++Q PSF VL +FLQNLPS+V H L
Sbjct: 185 FVGNGVARMDRSSLFCSDEPVKGVGVQMVEPLYQSPSFDGVLPSLVFLQNLPSVVAGHVL 244
Query: 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTY 317
P+ GER+LDMCAAPGGKT IA L+ D+G+VVA+DR NK+ I + A + L+ I +
Sbjct: 245 GPRPGERVLDMCAAPGGKTCHIAVLMGDQGKVVALDRIRNKIDRILENAQALQLRSIKAF 304
Query: 318 KLDALKAV 325
++ +AV
Sbjct: 305 CFNSTQAV 312
>gi|156375011|ref|XP_001629876.1| predicted protein [Nematostella vectensis]
gi|156216886|gb|EDO37813.1| predicted protein [Nematostella vectensis]
Length = 491
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 150/300 (50%), Gaps = 36/300 (12%)
Query: 32 FSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTI 91
F R+ L +P ++ +RVNTL T + ++L + S V T+
Sbjct: 72 FDRLLSCLGQPPLFTTVRVNTLLVTISEAKEQLEQALLKQYSERERPCLEV-------TV 124
Query: 92 SESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACS 151
S L V+ +KGSGPH + K K++IV C AVLRGA V+ PGV+
Sbjct: 125 HHS----LPDVLVIKGSGPH-----LDLPKHTKQIIVDTHCGTAVLRGADVFAPGVIGAH 175
Query: 152 SHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSR 211
++ D V+V +++ G + PY S L++G G A+MSR
Sbjct: 176 PGIQSEDDVSVFADLDKQCRRGC---------------SKPY--NGSTLFVGNGKAVMSR 218
Query: 212 AGIFRAS---EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDM 268
+ IF + GIAV M ++ PS VL +FLQNLPS V H L PQ GE +LDM
Sbjct: 219 SDIFCTNGKLSGIAVRMCQPLYDCPSLSGVLTDVLFLQNLPSAVVGHILGPQSGESVLDM 278
Query: 269 CAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRK 328
CAAPGGKT IA+L++++G +VA D+S K+ I + + T+ +DA KA+ K
Sbjct: 279 CAAPGGKTCHIAALMKNKGLIVAFDKSQPKIQKIIANCEMQKVSIVKTHVIDASKALDTK 338
>gi|330842051|ref|XP_003292999.1| hypothetical protein DICPUDRAFT_41394 [Dictyostelium purpureum]
gi|325076705|gb|EGC30470.1| hypothetical protein DICPUDRAFT_41394 [Dictyostelium purpureum]
Length = 491
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 167/328 (50%), Gaps = 40/328 (12%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
+V + ++ YG + +I K++T Y+ IRVN+ KTT ++K + +
Sbjct: 41 EVYNHLLKYYGKERMEQIQKSMTDAFLYTTIRVNS-KTTNKAQLKKDMINHFEENERNLE 99
Query: 78 VASSVKGRLQNGTISESQIPG---------LEYVVFVKGSGPHTIDYGYEPDKPPKEVIV 128
+ K L+ I S+ P L +F+K P ++IV
Sbjct: 100 NRNHFKKLLEFNEIINSKSPSTTNEIEKQILNDTLFIKNEKNLKTPLPIYP-----QIIV 154
Query: 129 SRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGS 188
C EAVLRG+ ++ G++A + +++KGD+V+V V ++ L +G++++G
Sbjct: 155 DIMCGEAVLRGSHIFSVGILASNKYIKKGDMVSVFVNLDSLVL---------KGSIIEG- 204
Query: 189 QTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNL 248
F+ ++G G +++ R+ G+ ++M R+F P VLE +FLQ+L
Sbjct: 205 -----VFKEKSAFVGNGISLLDRSEYNNTKTGVGIEMTERLFFCPPLNGVLEQNMFLQHL 259
Query: 249 PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDE---------GEVVAVDRSHNKV 299
PS++T + L+P+ G+RILDMCAAPGGKTT IASL++ + E++A+D++ KV
Sbjct: 260 PSLMTVYQLEPKLGDRILDMCAAPGGKTTLIASLIQQQFDQQPSNNSTEIIALDKNKGKV 319
Query: 300 MDIQKLAAEMGLKC-ITTYKLDALKAVR 326
+ L ++ L + Y D+ K ++
Sbjct: 320 KKVLDLCKKLSLDSFVKCYSRDSSKLLK 347
>gi|290985269|ref|XP_002675348.1| predicted protein [Naegleria gruberi]
gi|284088944|gb|EFC42604.1| predicted protein [Naegleria gruberi]
Length = 424
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 128/225 (56%), Gaps = 8/225 (3%)
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
K+++V RKC EAVLRGA V+ PG++ S + G +A+ + T G+ T
Sbjct: 62 KDIVVDRKCGEAVLRGADVFAPGILGISKNCHSGSEIAILCDISSQT-KKGFRFEKTIEE 120
Query: 184 VLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS-EGIAVDMHNRIFQLPSFYDVLE-- 240
++Q + Y ++ +Y+G G M R IF+A+ +GI +++ ++ S ++ +
Sbjct: 121 MIQIDENTKY---QNFIYVGNGILKMDRTSIFQANVKGIGLEVTQPFYETCSLNEISQTY 177
Query: 241 -GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
E F QN+ S+V AH LDP+KGE+ILDMCA PGGKTT I++L+ +EGE++ DR KV
Sbjct: 178 YNEFFAQNICSMVVAHLLDPKKGEKILDMCACPGGKTTHISNLMENEGELICCDRQKGKV 237
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNN 344
++KL+ ++G + LD KA RR N + E + N
Sbjct: 238 DLLKKLSEKLGYSVMKPTVLDGTKATRRVNTDSSENQKSKKRKTN 282
>gi|443731167|gb|ELU16404.1| hypothetical protein CAPTEDRAFT_182050 [Capitella teleta]
Length = 426
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 155/296 (52%), Gaps = 40/296 (13%)
Query: 31 HFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGT 90
+ + + L P ++ +R+N L+++ + + +L I++ S+ +
Sbjct: 10 ELATVLRHLALPPMFTTLRINELQSSKESITDQLQEILKKQYESKDMEPLPI-------- 61
Query: 91 ISESQIPG--LEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVM 148
+P L +++K GP E + +V+V C AVLRGA V+ G+
Sbjct: 62 -----VPHCCLRDALYIKHRGPR-----LELPQLQLKVVVGVACGMAVLRGADVFAQGIT 111
Query: 149 ACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAM 208
++++ G++V+V V DGG G+T+ FE + +++G G +
Sbjct: 112 GAPANLQAGEMVSVYADV-----DGGCRKGLTKP------------FEGTTIFVGNGRML 154
Query: 209 MSRAGIFRASE---GIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERI 265
MSR IF + E G+A+ M+ +++ PS +L +F QNLPS++ +H L+PQ G+ I
Sbjct: 155 MSRRDIFVSMEKVSGMAIQMNQPLYEAPSLSGILPSLVFPQNLPSVLCSHVLNPQPGQTI 214
Query: 266 LDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+D+CAAPGGKT +ASL++++G VVA+D++ K+ + A E GL CI Y DA
Sbjct: 215 IDLCAAPGGKTVHLASLMKNQGRVVALDKTSGKISKVLSNAKEWGLSCIEAYAFDA 270
>gi|431917694|gb|ELK16959.1| Putative methyltransferase NSUN6 [Pteropus alecto]
Length = 460
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 150/309 (48%), Gaps = 57/309 (18%)
Query: 32 FSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTI 91
F + L+ P ++ +RVN+ + V L +Q + ++
Sbjct: 39 FETLLNNLSHPPSFTTVRVNSHLASVQHVKNLLFDELQK--------------QFNGLSV 84
Query: 92 SESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACS 151
Q P L+ V+ + GP +K E IV +C AVLRGA VYVPG+++ S
Sbjct: 85 PILQHPDLQDVLLIPVIGPRK-----NINKKQCEAIVGAQCGNAVLRGAHVYVPGIVSAS 139
Query: 152 SHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSR 211
+ +G++ F+ + +++G G + +SR
Sbjct: 140 -----------------------------KCKCKKGAKE----FDGTKVFLGNGISEVSR 166
Query: 212 AGIFRAS---EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDM 268
IF +GI + M ++ PSF +VL +FLQNLPS V H LDPQ GERILD+
Sbjct: 167 KEIFSGLPELKGIGIRMTEPVYLSPSFDNVLSSYLFLQNLPSAVVTHVLDPQPGERILDL 226
Query: 269 CAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR-- 326
CAAPGGKTT IA+L+ D+GEV+A+D+ NKV I++ A +GL I + D KA++
Sbjct: 227 CAAPGGKTTHIAALMHDQGEVIALDKISNKVKKIKQNALLLGLNSIRAFCFDGTKALKLD 286
Query: 327 RKNESNDEP 335
R ++ EP
Sbjct: 287 RIKDTEGEP 295
>gi|66803617|ref|XP_635647.1| NOL1/NOP2/Sun family protein [Dictyostelium discoideum AX4]
gi|60463974|gb|EAL62137.1| NOL1/NOP2/Sun family protein [Dictyostelium discoideum AX4]
Length = 501
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 171/347 (49%), Gaps = 57/347 (16%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSS--E 75
+V + I+ YG +H RI K++T+ Y+ IRVNT+ T D ++ L + + S
Sbjct: 36 EVLNHLIKYYGKEHMERIQKSMTQTFLYTTIRVNTMNTNKDKLLIDLSNHFKTNEKSIEN 95
Query: 76 ADVASSVKG-------------RLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKP 122
++ ++ K N ++QI + +F+K GP P
Sbjct: 96 QEIFTNFKSFNDILNNIENNNNDNDNNDEIKNQIS--KDTIFIKTIGPLI------PKPI 147
Query: 123 PKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRG 182
++IV C EAVLRG+ ++ GV+ + +++KG++V+V V ++ +++G
Sbjct: 148 YPQIIVDLICGEAVLRGSNIFSIGVLGSNKYIKKGNMVSVFVTIDS---------RVSKG 198
Query: 183 TVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGE 242
+ + F+ +IG G +++ R + G+A++M R++ P VLE +
Sbjct: 199 EIFEDC------FKEKCAFIGNGISLLDRDDYHQTRVGVAIEMTERLYVCPPLNSVLEDK 252
Query: 243 IFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD----------------- 285
+FLQ+LPSI T + L+P+ G++I+DMCAAPGGKTT IASL++
Sbjct: 253 MFLQHLPSIYTVYQLEPKLGDKIIDMCAAPGGKTTLIASLIQQFEINNNQNNQKYQNNNE 312
Query: 286 -EGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVRRKNE 330
+ E+ A+D++ KV I L + L K +T D+ K + +
Sbjct: 313 IKTEIFALDKNKGKVKKIIDLCKRLSLDKYVTCLAKDSSKLTKENQQ 359
>gi|452820975|gb|EME28011.1| alkane 1-monooxygenase isoform 2 [Galdieria sulphuraria]
Length = 957
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 167/331 (50%), Gaps = 36/331 (10%)
Query: 16 NPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLA-IIQNSGSS 74
N +++ + + YG D+F + + L+ P + RVNTLKTT D + L +I+ +
Sbjct: 304 NEELQNFLVDIYGKDNFHGLCRKLSVPPP-TTFRVNTLKTTADKFCESLRERVIRQAKHR 362
Query: 75 EADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAE 134
+ D K R+ P ++ V+ + GP D P V C E
Sbjct: 363 QVDEKELAKLRVIVH-------PKIKDVIQLDTLGPFDRDTQGLP-----VACVDSFCGE 410
Query: 135 AVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYY 194
+V RGA VY G++A S +V V + +G ITRG+
Sbjct: 411 SVFRGADVYAGGIVALESSAAVNQLVQVWM--------DPFG-AITRGST---------Q 452
Query: 195 FERSGL-YIGQGTAMMSRAGIFRAS--EGIAVDMHNRIFQLPSFYDVL-EGEIFLQNLPS 250
F+ S L Y+G G + SR IF +S EG+A+ + ++ PS +D++ +G LQNLP
Sbjct: 453 FDTSRLIYVGNGLLLQSRREIFHSSVCEGLAIQIVEPVYFAPSLFDIVSQGIGILQNLPC 512
Query: 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG 310
V H +DP+ G+RILD+CA+PGGKT+ +A+L+ ++G +VA+DR+ KV I+ L + G
Sbjct: 513 TVVGHVMDPKPGQRILDLCASPGGKTSHLATLMHNQGTLVALDRNRKKVEAIESLCKKWG 572
Query: 311 LKCITTYKLDALKAVRRKNESNDEPNMCNSK 341
+ + +Y +DA K E + E + + K
Sbjct: 573 IDIVYSYVVDATKFRNYIQEFSSEQDHFSVK 603
>gi|452820974|gb|EME28010.1| alkane 1-monooxygenase isoform 1 [Galdieria sulphuraria]
Length = 995
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 167/331 (50%), Gaps = 36/331 (10%)
Query: 16 NPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLA-IIQNSGSS 74
N +++ + + YG D+F + + L+ P + RVNTLKTT D + L +I+ +
Sbjct: 342 NEELQNFLVDIYGKDNFHGLCRKLSVPPP-TTFRVNTLKTTADKFCESLRERVIRQAKHR 400
Query: 75 EADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAE 134
+ D K R+ P ++ V+ + GP D P V C E
Sbjct: 401 QVDEKELAKLRVIVH-------PKIKDVIQLDTLGPFDRDTQGLP-----VACVDSFCGE 448
Query: 135 AVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYY 194
+V RGA VY G++A S +V V + +G ITRG+
Sbjct: 449 SVFRGADVYAGGIVALESSAAVNQLVQVWM--------DPFG-AITRGST---------Q 490
Query: 195 FERSGL-YIGQGTAMMSRAGIFRAS--EGIAVDMHNRIFQLPSFYDVL-EGEIFLQNLPS 250
F+ S L Y+G G + SR IF +S EG+A+ + ++ PS +D++ +G LQNLP
Sbjct: 491 FDTSRLIYVGNGLLLQSRREIFHSSVCEGLAIQIVEPVYFAPSLFDIVSQGIGILQNLPC 550
Query: 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG 310
V H +DP+ G+RILD+CA+PGGKT+ +A+L+ ++G +VA+DR+ KV I+ L + G
Sbjct: 551 TVVGHVMDPKPGQRILDLCASPGGKTSHLATLMHNQGTLVALDRNRKKVEAIESLCKKWG 610
Query: 311 LKCITTYKLDALKAVRRKNESNDEPNMCNSK 341
+ + +Y +DA K E + E + + K
Sbjct: 611 IDIVYSYVVDATKFRNYIQEFSSEQDHFSVK 641
>gi|339242639|ref|XP_003377245.1| putative methyltransferase NSUN6 [Trichinella spiralis]
gi|316973969|gb|EFV57510.1| putative methyltransferase NSUN6 [Trichinella spiralis]
Length = 336
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 147/289 (50%), Gaps = 39/289 (13%)
Query: 42 PSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEY 101
P YS +RVNT+K + I Q E ++ K + +N S L+
Sbjct: 12 PPLYSTVRVNTMK----------IGIHQAKERMEILLSEQYKAK-ENKKPEVSLHWCLKD 60
Query: 102 VVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVA 161
V+ + GSGPH E + P E+ V +KC ++VLRGA +Y G++ + +G V+
Sbjct: 61 VLVLTGSGPH------EKEPFPTEIYVDKKCGKSVLRGADIYSVGILGSNRWFAEGSNVS 114
Query: 162 VSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS--- 218
V + L+G LG R PY ++ L++G G +SR +F+
Sbjct: 115 VYM-----DLEGKCRLGWKR----------PY--DKRKLFLGNGVIAISRDSLFKTKLMK 157
Query: 219 --EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
+ V M ++ P Y ++E F QNLPSI+ H L+PQ GE ILD+CAAPGGKT
Sbjct: 158 KQPEMGVLMTAGVWNHPKLYGIVEDWGFPQNLPSIICTHVLNPQPGEVILDLCAAPGGKT 217
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325
T IA+L +D+ VVAVD ++ ++++ A ++ LK I DA+K V
Sbjct: 218 THIATLTKDQARVVAVDDCSKRLQELKENAKKLNLKSIEPNLADAVKLV 266
>gi|196009916|ref|XP_002114823.1| hypothetical protein TRIADDRAFT_28123 [Trichoplax adhaerens]
gi|190582885|gb|EDV22957.1| hypothetical protein TRIADDRAFT_28123 [Trichoplax adhaerens]
Length = 426
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 146/295 (49%), Gaps = 38/295 (12%)
Query: 34 RISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISE 93
+ K L P + +RVNT+ T D+ + L II+ +L N I
Sbjct: 8 HLQKILAYPPLLTILRVNTVHFTIDEAEKMLRDIIEKRAER----------KLANLQILR 57
Query: 94 SQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSH 153
P + V+ + + I KEVIV +C +VLRGA V+ G+ +
Sbjct: 58 H--PVIPDVLMIPAQINNDITV------VGKEVIVGSQCGMSVLRGANVFAIGIRGADPN 109
Query: 154 VEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAG 213
++ GD V+V + DG F L++G G A +SR
Sbjct: 110 IQIGDTVSVYADIHDICRDGTTA-----------------KFTEEKLFVGNGIAKISRRE 152
Query: 214 IFRAS---EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCA 270
+F+ + GIAV++ ++ P+ + + +FLQNLPS+V +H L+P +G+ ILDMC+
Sbjct: 153 LFKGNNKPRGIAVEVSEPLYLFPALNGIGDEFVFLQNLPSVVASHVLNPHEGDTILDMCS 212
Query: 271 APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325
APGGK T IA+L++++G ++A+D+S +K+ I+ A + L CI + D+ KAV
Sbjct: 213 APGGKATHIATLMKNKGTIIALDKSKSKLHKIKSNAERLNLSCIEVFAFDSTKAV 267
>gi|198419141|ref|XP_002127214.1| PREDICTED: similar to NOL1/NOP2/Sun domain family, member 6 [Ciona
intestinalis]
Length = 445
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 155/308 (50%), Gaps = 51/308 (16%)
Query: 39 LTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQ----NSGSSEADVASSVKGRLQNGTISES 94
++ P ++ +RVN + D VI++L A ++ +G SEA V Q+ + +
Sbjct: 3 ISIPPLFTTLRVNETEQV-DSVIKELEAKLKILYSANGYSEAPVI------FQHSQLKST 55
Query: 95 QIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHV 154
+ Y I + Y P VIV C AVLRGA V+VPG++ + V
Sbjct: 56 IVIPTLY---------QDIMHSYPP------VIVDHGCGMAVLRGADVFVPGILCMPTGV 100
Query: 155 EKGDVVAVSVAVEQPTLDGGWGL-GITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAG 213
+ GD V+V + GG L G+TR +E L++G G + SR
Sbjct: 101 QVGDKVSVCADI------GGSCLRGMTR-------------YEGQMLFVGNGVMLKSRND 141
Query: 214 IFRA---SEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCA 270
IF+ ++G + M IF DVL +IF QNLPSI+ H L+PQ+G+ +LDMCA
Sbjct: 142 IFKGNNITKGSGIRMECPIFLSLCLNDVLPSKIFAQNLPSIIVGHVLNPQEGDIVLDMCA 201
Query: 271 APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG--LKCITTYKLDALKAVRRK 328
APGGKT+ I SLLR G +VAVDRS +KV I++ AA++G +T + D+ K
Sbjct: 202 APGGKTSHIVSLLRGRGRLVAVDRSSSKVEKIKQNAAKLGQMADVLTVFTADSRKLCSDD 261
Query: 329 NESNDEPN 336
+ E N
Sbjct: 262 SGDKSEEN 269
>gi|221122446|ref|XP_002154232.1| PREDICTED: putative methyltransferase NSUN6-like [Hydra
magnipapillata]
Length = 452
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 150/304 (49%), Gaps = 43/304 (14%)
Query: 25 RAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKG 84
+ Y + + I +++P + +RVNTLK T D+ I L +++S SE+ S K
Sbjct: 16 QLYPTKNENEILDVISKPPKNTVLRVNTLKVTLDEAIIVLNNFLKDS--SESLGFSVSKH 73
Query: 85 RLQNGTISESQIPGLEYVVFVKGS--GPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQV 142
RL V+FV S H Y KEVIV C AVLRGA V
Sbjct: 74 RL------------FSDVLFVSSSEVKDHLAIYN-------KEVIVDVHCGAAVLRGAHV 114
Query: 143 YVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYI 202
+ PGV+A S+ +++GD+V+V V D G T+ F +I
Sbjct: 115 FAPGVLAASADMKQGDMVSVYADV-----DHKCRRGYTK------------VFTGRKFFI 157
Query: 203 GQGTAMMSRAGIFRASE---GIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDP 259
G G A +R +F + G+AV M + PSF + F QNLPSI+ H +P
Sbjct: 158 GNGLAEFNRDTLFEHNAKIIGVAVKMLSMKIPQPSFSKLNLELFFPQNLPSILVGHICNP 217
Query: 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKL 319
Q G+ ILDMCA+PGGKT+ +A L++++G ++A+D+S K+ I + MGL + +
Sbjct: 218 QDGDLILDMCASPGGKTSHVAVLMKNQGTIIAIDKSEKKISKITENCVIMGLTNVKCFAY 277
Query: 320 DALK 323
D+ K
Sbjct: 278 DSSK 281
>gi|195592453|ref|XP_002085949.1| GD15057 [Drosophila simulans]
gi|194197958|gb|EDX11534.1| GD15057 [Drosophila simulans]
Length = 440
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 119/207 (57%), Gaps = 24/207 (11%)
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
KEV+V C A+LRGA +Y PGV+A S+ E+ ++V V LDG RGT
Sbjct: 102 KEVVVDTNCGAALLRGAHIYAPGVLAMESNTEREELVNVYA-----DLDGK----CKRGT 152
Query: 184 VLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASE----GIAVDMHNRIFQLPSFYDVL 239
V + Y + +++G G +M R +F +E G+AV+M + + +PS D+
Sbjct: 153 VKR-------YESPNKVFLGTGKVLMQRYQLFNNAEKPASGVAVEMRSNVSGVPSLGDLS 205
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
LQNLPSIV LDPQ GERILDMCAAPG KT+ IA L+ D G VVA+D S ++V
Sbjct: 206 NENGLLQNLPSIVCVRVLDPQPGERILDMCAAPGNKTSHIAELMGDRGSVVALDNSASRV 265
Query: 300 MDIQKLAAEMG-LKCITTYKLDALKAV 325
+ + ++G KCIT + ++ KAV
Sbjct: 266 ---RSMLPKLGHYKCITAHVFNSTKAV 289
>gi|375081855|ref|ZP_09728931.1| Sun/NOL1/NOP nucleolar protein [Thermococcus litoralis DSM 5473]
gi|374743469|gb|EHR79831.1| Sun/NOL1/NOP nucleolar protein [Thermococcus litoralis DSM 5473]
Length = 383
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 155/307 (50%), Gaps = 61/307 (19%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
+++ Y+ +G++ I K L P IRVNTLK + QKL+ ++ G
Sbjct: 9 ELQRYYYNLFGSEA-EEIMKKLREPVEKYYIRVNTLKISR----QKLMEELRKEG----- 58
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVL 137
+ + P LE ++ + GP+ D YEP P +V+ ++ AE+V
Sbjct: 59 -------------LKPKRSPYLEEGIYFEREGPNFPD-DYEPKLP--KVVANKFAAESVY 102
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFER 197
+GAQ+Y PGV+ +++GD V + DP
Sbjct: 103 QGAQLYAPGVLKADKGIKEGDEVQIR---------------------------DP----- 130
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVL---EGEIFLQNLPSIVTA 254
GL +G G A MS + A+ GIAV++ F+LPS ++ +G + Q+LPS+V A
Sbjct: 131 KGLLVGIGIARMSAKEMVVATRGIAVEVTLPKFKLPSLNELKAYEKGYFYAQSLPSMVVA 190
Query: 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
H L+PQ+ + I+DM AAPGGKT+ IA LL + GE++A+D+S N++ ++K +G+K +
Sbjct: 191 HILEPQEEDLIIDMAAAPGGKTSHIAQLLENRGEIIAIDKSRNRLAKMEKELKRLGVKNV 250
Query: 315 TTYKLDA 321
++D+
Sbjct: 251 KLVQMDS 257
>gi|195441370|ref|XP_002068484.1| GK20395 [Drosophila willistoni]
gi|194164569|gb|EDW79470.1| GK20395 [Drosophila willistoni]
Length = 457
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 160/338 (47%), Gaps = 43/338 (12%)
Query: 7 YSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLA 66
Y +P LR PQ+E+ ++ A + + L + + RVNTL D + KL
Sbjct: 3 YPKTPFLR-KPQLEKELLKINVAA-LPELLEWLCQAPSLTTYRVNTLTIDPKDYLHKL-- 58
Query: 67 IIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFV-----KGSGPHTIDYGYEPDK 121
++ R +IP + ++ + + SG D +P
Sbjct: 59 ------------EQTLVDRFGQRAPKVFRIPDIPEMMCIDPFKDQSSGKGGKDDKCQPST 106
Query: 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITR 181
+E+IV C A+LRG+ +Y PGV+A + + + V V VE
Sbjct: 107 TRREIIVDTSCGAALLRGSHIYAPGVLAMETGTQLHECVDVYADVE-------------- 152
Query: 182 GTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFR----ASEGIAVDMHNRIFQLPSFYD 237
G +G+ T Y ++IG G M R ++ + GIA+ M + + +PS D
Sbjct: 153 GNCKRGTAT--RYESSEKIFIGIGIVKMQRYQLYNNQKDSPSGIAIQMQSTVSGVPSLGD 210
Query: 238 VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297
+ + LQNLPS+V L+PQ G+R+LDMCAAPG KT+ IA L+RD+G +VA+D S +
Sbjct: 211 LSDAYGLLQNLPSMVCVRVLNPQPGDRVLDMCAAPGNKTSHIAELMRDQGVLVALDNSKS 270
Query: 298 KVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEP 335
++ +Q KCI ++ D+ KA+ N+ +++P
Sbjct: 271 RIKAMQSRIGHY--KCIQSHVFDSTKALAEHNDQHNDP 306
>gi|340370362|ref|XP_003383715.1| PREDICTED: putative methyltransferase NSUN6-like [Amphimedon
queenslandica]
Length = 456
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 156/306 (50%), Gaps = 37/306 (12%)
Query: 30 DHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASS-VKGRLQN 88
D + L P S +RVNTLKT I+ S DV + R +
Sbjct: 27 DVIENLCAELATPPLTSSVRVNTLKT----------PIVSEGVESVKDVLEKYCRERNCS 76
Query: 89 GTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVM 148
+IS S P L V+ ++GSGPH+ Y+ KE++V C ++VLRGA VY PG++
Sbjct: 77 TSISMSVHPLLPDVLLIEGSGPHSDLRLYD-----KEILVEMTCGQSVLRGADVYGPGIL 131
Query: 149 ACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAM 208
+ G+ V+V D G +R +++ ++ +YIG G A
Sbjct: 132 GAPKDLFIGESVSVYA-------DSG---NESRKGLVKK-------YDGPKVYIGNGKAC 174
Query: 209 MSRAGIF---RASEGIAVDMHNRIFQLPSFYDVLEGEI-FLQNLPSIVTAHALDPQKGER 264
+RA F S G+A+ M + ++ PS ++L ++ F Q+LPS+V +H L P + +R
Sbjct: 175 QTRADWFGPSAKSSGLAIRMTDPLYISPSLNEMLLNDVAFPQSLPSLVVSHVLKPTETDR 234
Query: 265 ILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324
+LDMCAAPGGK T +A+L+R++G ++A+DRS K+ ++ GL + + D+ A
Sbjct: 235 VLDMCAAPGGKATHLATLMRNKGVIIALDRSAGKMKSLKHNVKRFGLTNVHCFHHDSTAA 294
Query: 325 VRRKNE 330
K++
Sbjct: 295 CSSKSD 300
>gi|281209306|gb|EFA83479.1| NOL1/NOP2/Sun family protein [Polysphondylium pallidum PN500]
Length = 435
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 154/307 (50%), Gaps = 41/307 (13%)
Query: 21 EYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVAS 80
++ + Y + S I +A T +C+RVNTLK + + +I+KL+ + +
Sbjct: 32 QHLLNYYDEEQLSSIQRAQTTVQSLTCVRVNTLKISKNQLIEKLI---------DHFNNN 82
Query: 81 SVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGA 140
+ G+ +S I + ++ + + E + E I+++ E
Sbjct: 83 NNNGQPSTYKLSFDDIISFDQLL-------NKDNNNSEDNHKNNEEILNKLNNE------ 129
Query: 141 QVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGL 200
PGV+ + KG+ V++ V + DG G + + +Y ER+ +
Sbjct: 130 ----PGVIGSDKTIVKGEKVSIFVDLMG---DGKKGFVVEQ-----------FYKERT-V 170
Query: 201 YIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQ 260
YIG G +++ R F + G+A++M RI++ P + +FLQ+LPSI+ LD +
Sbjct: 171 YIGNGISLLDRLDYFSGNGGVAIEMTERIYECPPLNALFPDLLFLQHLPSILAVFQLDVK 230
Query: 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
G+R+LDMC+APGGKTT IASL+ D G ++A+D++ K +QKL E+G+K +T D
Sbjct: 231 SGQRVLDMCSAPGGKTTLIASLMSDTGTIIAIDKNKKKQQTVQKLCLELGIKSVTCLSRD 290
Query: 321 ALKAVRR 327
+ K ++
Sbjct: 291 SAKLTKQ 297
>gi|405960623|gb|EKC26529.1| Putative methyltransferase NSUN6 [Crassostrea gigas]
Length = 436
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 140/296 (47%), Gaps = 57/296 (19%)
Query: 31 HFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGT 90
+F + + L P ++ +R+NT K + +++ AII V + K
Sbjct: 33 YFDVLQERLASPPMFTTLRLNTTKHSAEEI----HAIINQELQK---VYTDRKWDPPQSF 85
Query: 91 ISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMAC 150
+ P L+ V+ ++ GP I K KEVI+ + C AV+RGA ++V G++
Sbjct: 86 LH----PELDDVLVIENRGPRPIK------KMEKEVIIDQSCGMAVMRGADIFVQGILGA 135
Query: 151 SSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMS 210
PT D T P R L++G G A
Sbjct: 136 ------------------PTRD-----------------TQPLSGPR--LHVGNGVAKFD 158
Query: 211 RAGIFRAS---EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD 267
R IF++ G+ + M +++ P D+ I QNLPSIV H LDP+ GERILD
Sbjct: 159 RDAIFKSQPPPSGVGILMTEPLYEAPCLSDLRPDLIMAQNLPSIVCTHVLDPKPGERILD 218
Query: 268 MCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
MCAAPGGKTT IAS ++++GEV+A+DRS KV I+ L C+T + DALK
Sbjct: 219 MCAAPGGKTTHIASRMQNKGEVIAIDRSDVKVEKIRSNLERWALTCVTCHACDALK 274
>gi|403278299|ref|XP_003930754.1| PREDICTED: putative methyltransferase NSUN6 [Saimiri boliviensis
boliviensis]
Length = 444
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 143/295 (48%), Gaps = 53/295 (17%)
Query: 8 SYSPLLRWNPQVEEYF---------IRAYGAD----HFSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y + A+G + F + K L+ P ++ +RVNT
Sbjct: 2 SVFPKVSLRPEVENYLKEGFVNKEIVSAFGKEAAERKFETLLKHLSHPPSFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ V LL +Q +L +I Q P L+ V+ + GP
Sbjct: 62 ASVQHVKNLLLDELQK--------------QLNGLSIPILQHPDLQDVLLIPVVGPRK-- 105
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
K E IV +C AVLRGA VY PG+++ S ++ GDV++V +
Sbjct: 106 ---NIKKQQCEAIVGAQCGNAVLRGAHVYAPGIVSASKFMKAGDVISVYSDI-------- 154
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
+G +G++ F+ + +++G G + +SR IF +G+ + M ++
Sbjct: 155 ------KGKCKKGAKE----FDGTKVFLGNGISELSRKEIFNGLPELKGMGIRMTEPVYL 204
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDE 286
PSF VL +FLQNLPS V H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+
Sbjct: 205 SPSFDSVLPRYLFLQNLPSAVVTHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQ 259
>gi|223998784|ref|XP_002289065.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976173|gb|EED94501.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 362
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 113/202 (55%), Gaps = 15/202 (7%)
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
+ +IV R C EAVLRGA V+V G++ S + G+ VAV L G + RG
Sbjct: 4 RAIIVDRFCGEAVLRGANVFVKGILCADSGISVGEEVAVYA-----DLRGTNSKPVPRGL 58
Query: 184 VLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIF--QLPSFYDVLEG 241
VL+ + +++G G + R+ F S G+ + M RI PS VL G
Sbjct: 59 VLES-------YPGRCVFLGIGISCCKRSDYFAQSTGVGITM-KRIAGPSQPSLNGVLVG 110
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMD 301
++ LQNLPS+V AH LDPQ+GE +LDMC+APGGKT+ +ASL+R+ G VVA ++ K++
Sbjct: 111 KMMLQNLPSVVVAHVLDPQQGETVLDMCSAPGGKTSHVASLIRNNGLVVACEKGRKKMVT 170
Query: 302 IQKLAAEMGLKCITTYKLDALK 323
+ MG CI LD+ K
Sbjct: 171 ARDFFQSMGATCIVPLSLDSTK 192
>gi|242399817|ref|YP_002995242.1| Sun/NOL1/NOP nucleolar protein [Thermococcus sibiricus MM 739]
gi|242266211|gb|ACS90893.1| Sun/NOL1/NOP nucleolar protein [Thermococcus sibiricus MM 739]
Length = 383
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 152/307 (49%), Gaps = 61/307 (19%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
++ Y+ +G D + + L P IRVNTLK + D +I+ L
Sbjct: 9 ELRRYYYGFFG-DEAEELMRTLREPVEKYYIRVNTLKISRDRLIEDL------------- 54
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVL 137
+ + + P LE ++ + GP+ +D Y PD P +V+ ++ +E+V
Sbjct: 55 ---------RKEGLEPKRSPYLEEGIYFEREGPNFLD-DYNPDLP--KVVANKFASESVY 102
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFER 197
+GAQ+Y PGV+ + +GD V + DP
Sbjct: 103 QGAQLYAPGVLKADKGIREGDQVQIR---------------------------DP----- 130
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVL---EGEIFLQNLPSIVTA 254
GL +G G A M+ + A+ G+AV++ F+LPS ++ +G ++Q LPS+V +
Sbjct: 131 KGLLVGIGIARMNAKEMIIATRGVAVEVTMPKFKLPSLNELESYEKGYFYVQTLPSMVAS 190
Query: 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
H LDP++G+ I+DM AAPGGKT+ IA LL + GE++A+D+S N++ ++ +G+K +
Sbjct: 191 HVLDPKEGDLIIDMTAAPGGKTSHIAQLLENRGEILALDKSKNRLSKMKNELERLGVKNV 250
Query: 315 TTYKLDA 321
++D+
Sbjct: 251 KLIQMDS 257
>gi|18976541|ref|NP_577898.1| nol1-nop2-sun family nucleolar protein III [Pyrococcus furiosus DSM
3638]
gi|397652118|ref|YP_006492699.1| nol1-nop2-sun family nucleolar protein III [Pyrococcus furiosus
COM1]
gi|18892094|gb|AAL80293.1| putative nucleolar protein III (nol1-nop2-sun family) [Pyrococcus
furiosus DSM 3638]
gi|393189709|gb|AFN04407.1| nol1-nop2-sun family nucleolar protein III [Pyrococcus furiosus
COM1]
Length = 386
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 157/310 (50%), Gaps = 61/310 (19%)
Query: 15 WNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSS 74
+ P+++EY+ + +G + I K L P + IRVNTLK + + +I++L
Sbjct: 7 FPPELQEYYRKLFGEEA-EEIMKRLREPVEHYYIRVNTLKISREKLIEEL---------- 55
Query: 75 EADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAE 134
+ + + P L+ ++ GP+ D Y P+ P V+ ++ AE
Sbjct: 56 ------------RKEGLRPRRSPYLQEALYFVREGPNFPD-DYNPNLP--TVVANKYAAE 100
Query: 135 AVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYY 194
+V +GA +Y PGV+ +++GD+V + DP
Sbjct: 101 SVYQGAMLYAPGVLKAEKGIKEGDMVQIR---------------------------DP-- 131
Query: 195 FERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVL---EGEIFLQNLPSI 251
GL +G G A M + A+ G+AV++ F+LPS ++ +G + Q+LPS+
Sbjct: 132 ---RGLLVGIGIAKMDYREMIEATRGLAVEVTLPKFKLPSLSELKSFEKGYFYPQSLPSM 188
Query: 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311
VT+ L+P++ E I+DM AAPGGKT+ IA LL++ GE++A+D+S N++ +++ +G+
Sbjct: 189 VTSRVLEPKEEEIIIDMAAAPGGKTSHIAQLLQNRGEIIAIDKSKNRLKKMEENLKRLGV 248
Query: 312 KCITTYKLDA 321
K + ++DA
Sbjct: 249 KNVKLIQMDA 258
>gi|14591725|ref|NP_143813.1| hypothetical protein PH1991 [Pyrococcus horikoshii OT3]
gi|3258435|dbj|BAA31118.1| 389aa long hypothetical nucleolar protein [Pyrococcus horikoshii
OT3]
Length = 389
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 153/309 (49%), Gaps = 60/309 (19%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
++ EY+ +G + ++I K L P + IRVNTLK + + +I
Sbjct: 12 ELREYYKNLFGKEEANKIMKKLREPVEHYYIRVNTLKISREKLI---------------- 55
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVL 137
G L+ + + P L ++ GP+ D +EP P V+ ++ AE+V
Sbjct: 56 ------GELKKEGLKPLRSPYLPEGLYFVREGPNFSD-DFEPKLPV--VVANKYAAESVY 106
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFER 197
+GA +Y PGV+ ++++GD V + DP
Sbjct: 107 QGAMLYAPGVLKADKNIKEGDEVQIR---------------------------DP----- 134
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVL---EGEIFLQNLPSIVTA 254
GL +G G A M + A+ G+AV++ F+LPS ++ +G + Q LPS+VTA
Sbjct: 135 KGLLVGIGIARMDYKEMTEATRGLAVEVTLPKFKLPSLSELKAFEKGYFYPQGLPSMVTA 194
Query: 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
L+P++ + I+DM AAPGGKTT IA LL ++GE++A+D+S N++ +++ +G+K +
Sbjct: 195 RVLEPKEDDVIIDMAAAPGGKTTHIAQLLENKGEIIAIDKSKNRLRKMEENIKRLGVKNV 254
Query: 315 TTYKLDALK 323
++DA K
Sbjct: 255 KLVQMDARK 263
>gi|14521973|ref|NP_127450.1| proliferating-cell nucleolar antigen P120, [Pyrococcus abyssi GE5]
gi|5459193|emb|CAB50679.1| Sun/NOL1/NOP nucleolar protein [Pyrococcus abyssi GE5]
gi|380742614|tpe|CCE71248.1| TPA: proliferating-cell nucleolar antigen P120, putative
[Pyrococcus abyssi GE5]
Length = 385
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 152/307 (49%), Gaps = 61/307 (19%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
+++EY+ R +G D I + L P + IRVNTLK + + +I++L
Sbjct: 10 ELQEYYKRLFG-DEAYEIMRKLREPVEHYYIRVNTLKVSREKLIEEL------------- 55
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVL 137
+ + + P L+ ++ GP+ D Y PD P VI ++ AE+V
Sbjct: 56 ---------RKEGLKPRRSPYLQEALYFVREGPNFSD-EYNPDLP--TVIANKYAAESVY 103
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFER 197
+GA +Y PGV+ +++GD V + DP
Sbjct: 104 QGAMLYAPGVLRADKGIKEGDEVQIR---------------------------DP----- 131
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVL---EGEIFLQNLPSIVTA 254
GL +G G A M + A+ G+AV++ F+LPS ++ +G + Q+LPS+V
Sbjct: 132 RGLLVGIGIARMDYKEMIEATRGLAVEVTLPKFKLPSLSELKSFEKGYFYPQSLPSMVAT 191
Query: 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
L+P++ E I+DM AAPGGKTT IA LL++ GE++A+D+S N++ +++ +G+K +
Sbjct: 192 RVLEPKEDELIIDMAAAPGGKTTHIAQLLQNRGEIIAIDKSKNRLKKMEENLRRLGVKNV 251
Query: 315 TTYKLDA 321
++DA
Sbjct: 252 KLIQMDA 258
>gi|156546966|ref|XP_001599497.1| PREDICTED: putative methyltransferase NSUN6-like [Nasonia
vitripennis]
Length = 459
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 126/238 (52%), Gaps = 25/238 (10%)
Query: 94 SQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSH 153
S P +E ++ V G +++ E + EVIV C AVLRGA +Y PGV+
Sbjct: 91 STFPCVEELIIVNGWD-KSVELNLE--RQQYEVIVDAACGAAVLRGAHIYAPGVLGMPRG 147
Query: 154 VEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAG 213
++ GD+V+V +EQ +G V + Y +++ L++G G ++R
Sbjct: 148 LKVGDIVSVYADLEQ---------ACKKGLVTE-------YDKKNKLFVGNGIVQLTREQ 191
Query: 214 IF----RASEGIAVDMHNRIFQLPSFYDVL--EGEIFLQNLPSIVTAHALDPQKGERILD 267
IF + GIAV M + I +P D + +G + LQNLPSI+ + LDPQ GE +LD
Sbjct: 192 IFGHETEHTSGIAVTMTDIISHIPQINDNILPKGYVLLQNLPSILCSRVLDPQPGETVLD 251
Query: 268 MCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325
MCAAPG KTT IA+L+ ++G VVA+++ NK+ + + Y D+ KAV
Sbjct: 252 MCAAPGNKTTHIAALMENKGVVVAIEKIKNKLERLNSNIENFSATIVKAYCFDSTKAV 309
>gi|195348858|ref|XP_002040964.1| GM22476 [Drosophila sechellia]
gi|194122474|gb|EDW44517.1| GM22476 [Drosophila sechellia]
Length = 440
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 117/205 (57%), Gaps = 24/205 (11%)
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
KEV+V C A+LRGA +Y PGV+A S+ E+ ++V V LDG RGT
Sbjct: 102 KEVVVDTNCGAALLRGAHIYAPGVLAMESNTEREELVNVYA-----DLDGK----CKRGT 152
Query: 184 VLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASE----GIAVDMHNRIFQLPSFYDVL 239
V + Y + +++G G +M R +F +E G+AV+M + + +PS D+
Sbjct: 153 VKR-------YESPNKVFLGTGKVLMQRYQLFNNAEKPASGVAVEMQSNVSGVPSLGDLS 205
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+ LQNLPSIV LDPQ ERILDMCAAPG KT+ IA L+ D G VVA+D S ++V
Sbjct: 206 SEDGLLQNLPSIVCVRVLDPQPFERILDMCAAPGNKTSHIAELMGDRGSVVALDNSASRV 265
Query: 300 MDIQKLAAEMG-LKCITTYKLDALK 323
+ + ++G KCIT + ++ K
Sbjct: 266 ---RSMLPKLGHYKCITAHVFNSTK 287
>gi|40714555|gb|AAR88536.1| RH33950p [Drosophila melanogaster]
Length = 450
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 119/207 (57%), Gaps = 24/207 (11%)
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
KEV+V C A+LRGA +Y PGV+A S+ E+ ++V V LDG RGT
Sbjct: 102 KEVVVDTNCGAALLRGAHIYAPGVLAMESNTEREELVNVYA-----DLDGK----CKRGT 152
Query: 184 VLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASE----GIAVDMHNRIFQLPSFYDVL 239
V + Y + +++G G +M R +F +E G+AV+M + + +P+ D+
Sbjct: 153 VKR-------YESPNKVFLGTGKVLMQRYQLFNNAEKPASGVAVEMQSNVSGVPTLGDLS 205
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+ LQNLPSIV LDPQ GERILDMCAAPG KT+ IA L+ D G VVA+D S ++V
Sbjct: 206 SEDGLLQNLPSIVCVRVLDPQPGERILDMCAAPGNKTSHIAELMGDRGSVVALDNSASRV 265
Query: 300 MDIQKLAAEMG-LKCITTYKLDALKAV 325
+ + ++G K IT + ++ +AV
Sbjct: 266 ---RSMLPKLGHYKSITAHVFNSTEAV 289
>gi|195160569|ref|XP_002021148.1| GL24972 [Drosophila persimilis]
gi|194118261|gb|EDW40304.1| GL24972 [Drosophila persimilis]
Length = 438
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 122/233 (52%), Gaps = 28/233 (12%)
Query: 119 PDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLG 178
PD KEVIV C A+LRGA +Y PGV+A S+ + + V V L G G
Sbjct: 99 PDPTLKEVIVDTSCGAALLRGAHIYAPGVLAMESNTQLQECVNVYA-----DLAGKCKRG 153
Query: 179 ITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIF----RASEGIAVDMHNRIFQLPS 234
+T Y +Y+G G +M R ++ A GIAV+M + + +PS
Sbjct: 154 MTT-----------RYENSEKVYVGVGKVLMQRYQLYNDKNEAPTGIAVEMQSNVSGVPS 202
Query: 235 FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDR 294
D+ + LQNLPSIV LDPQ GERILDMCAAPG KTT IA L+ D+G VVA+D
Sbjct: 203 LGDLSSADALLQNLPSIVCVRVLDPQPGERILDMCAAPGNKTTHIAELMGDQGCVVALDN 262
Query: 295 SHNKVMDIQKLAAEMG--LKCITTYKLDALKAVRRKNESN---DEPNMCNSKD 342
S ++V + + ++G + I + D+ KAV ++S+ P C S D
Sbjct: 263 SASRV---RGMLGKLGNNYRSIQAHVFDSTKAVAASSDSSCPAAPPFPCASFD 312
>gi|198464825|ref|XP_001353377.2| GA10764 [Drosophila pseudoobscura pseudoobscura]
gi|198149898|gb|EAL30884.2| GA10764 [Drosophila pseudoobscura pseudoobscura]
Length = 438
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 122/233 (52%), Gaps = 28/233 (12%)
Query: 119 PDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLG 178
PD KEVIV C A+LRGA +Y PGV+A S+ + + V V L G G
Sbjct: 99 PDPTLKEVIVDTSCGAALLRGAHIYAPGVLAMESNTQLQECVNVYA-----DLAGKCKRG 153
Query: 179 ITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIF----RASEGIAVDMHNRIFQLPS 234
+T Y +Y+G G +M R ++ A GIAV+M + + +PS
Sbjct: 154 MTT-----------RYENSEKVYVGVGKVLMQRYQLYNDKDEAPTGIAVEMQSNVSGVPS 202
Query: 235 FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDR 294
D+ + LQNLPSIV LDPQ GERILDMCAAPG KTT IA L+ D+G VVA+D
Sbjct: 203 LGDLSSADALLQNLPSIVCVRVLDPQPGERILDMCAAPGNKTTHIAELMGDQGCVVALDN 262
Query: 295 SHNKVMDIQKLAAEMG--LKCITTYKLDALKAVRRKNES---NDEPNMCNSKD 342
S ++V + + ++G + I + D+ KAV ++S + P C S D
Sbjct: 263 SASRV---RGMLGKLGNNYRSIQAHVFDSTKAVAASSDSSCPSAPPFPCASFD 312
>gi|24668781|ref|NP_730761.1| CG11109, isoform B [Drosophila melanogaster]
gi|23094335|gb|AAN12208.1| CG11109, isoform B [Drosophila melanogaster]
gi|209417956|gb|ACI46516.1| FI01826p [Drosophila melanogaster]
Length = 439
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 119/207 (57%), Gaps = 24/207 (11%)
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
KEV+V C A+LRGA +Y PGV+A S+ E+ ++V V LDG RGT
Sbjct: 102 KEVVVDTNCGAALLRGAHIYAPGVLAMESNTEREELVNVYA-----DLDGK----CKRGT 152
Query: 184 VLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASE----GIAVDMHNRIFQLPSFYDVL 239
V + Y + +++G G +M R +F +E G+AV+M + + +P+ D+
Sbjct: 153 VKR-------YESPNKVFLGTGKVLMQRYQLFNNAEKPASGVAVEMQSNVSGVPTLGDLS 205
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+ LQNLPSIV LDPQ GERILDMCAAPG KT+ IA L+ D G VVA+D S ++V
Sbjct: 206 SEDGLLQNLPSIVCVRVLDPQPGERILDMCAAPGNKTSHIAELMGDRGSVVALDNSASRV 265
Query: 300 MDIQKLAAEMG-LKCITTYKLDALKAV 325
+ + ++G K IT + ++ +AV
Sbjct: 266 ---RSMLPKLGHYKSITAHVFNSTEAV 289
>gi|315231566|ref|YP_004072002.1| ribosomal RNA small subunit methyltransferase B [Thermococcus
barophilus MP]
gi|315184594|gb|ADT84779.1| ribosomal RNA small subunit methyltransferase B [Thermococcus
barophilus MP]
Length = 384
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 153/307 (49%), Gaps = 61/307 (19%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
+++EY+ + +G + I + L P IRVNTLK + D +I +L
Sbjct: 9 ELQEYYRKLFG-EEAEIIMQKLREPVEKYYIRVNTLKISRDKLIDEL------------- 54
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVL 137
+ + + P L+ ++ GP+ D Y P P V+ ++ AE+V
Sbjct: 55 ---------KREGLKPKRSPYLDEGIYFDREGPNFPD-DYNPRLP--TVVANKYAAESVY 102
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFER 197
+GA +Y PGV+ +++GD V + DP
Sbjct: 103 QGAMLYAPGVLKADKSIKEGDEVQIR---------------------------DP----- 130
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVL---EGEIFLQNLPSIVTA 254
GL +G GTA M+ + +A+ GIAV++ F+LPS ++ +G + Q+LPS+VTA
Sbjct: 131 KGLLVGIGTAKMNAKEMIKATRGIAVEVTLPKFKLPSLSELKSFEKGYFYPQSLPSMVTA 190
Query: 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
L+P +G+ I+DM AAPGGKTT +A L+++ GE++A+D+S N++ +++ +G+K +
Sbjct: 191 RILEPNEGDLIIDMAAAPGGKTTHLAQLMQNRGEIIAIDKSKNRLRKMEETLKRLGVKNV 250
Query: 315 TTYKLDA 321
+D+
Sbjct: 251 KLVHMDS 257
>gi|21356513|ref|NP_649425.1| CG11109, isoform A [Drosophila melanogaster]
gi|7296593|gb|AAF51875.1| CG11109, isoform A [Drosophila melanogaster]
gi|16768466|gb|AAL28452.1| GM05221p [Drosophila melanogaster]
gi|220943156|gb|ACL84121.1| CG11109-PA [synthetic construct]
gi|220953252|gb|ACL89169.1| CG11109-PA [synthetic construct]
Length = 358
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 119/207 (57%), Gaps = 24/207 (11%)
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
KEV+V C A+LRGA +Y PGV+A S+ E+ ++V V LDG RGT
Sbjct: 21 KEVVVDTNCGAALLRGAHIYAPGVLAMESNTEREELVNVYA-----DLDGK----CKRGT 71
Query: 184 VLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASE----GIAVDMHNRIFQLPSFYDVL 239
V + Y + +++G G +M R +F +E G+AV+M + + +P+ D+
Sbjct: 72 VKR-------YESPNKVFLGTGKVLMQRYQLFNNAEKPASGVAVEMQSNVSGVPTLGDLS 124
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+ LQNLPSIV LDPQ GERILDMCAAPG KT+ IA L+ D G VVA+D S ++V
Sbjct: 125 SEDGLLQNLPSIVCVRVLDPQPGERILDMCAAPGNKTSHIAELMGDRGSVVALDNSASRV 184
Query: 300 MDIQKLAAEMG-LKCITTYKLDALKAV 325
+ + ++G K IT + ++ +AV
Sbjct: 185 ---RSMLPKLGHYKSITAHVFNSTEAV 208
>gi|223477542|ref|YP_002581976.1| tRNA/RNA cytosine-C5-methylase [Thermococcus sp. AM4]
gi|214032768|gb|EEB73597.1| tRNA/RNA cytosine-C5-methylase [Thermococcus sp. AM4]
Length = 389
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 155/309 (50%), Gaps = 61/309 (19%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
+++EY+ + +G + I +L P IRVNTLKT+ + KL+ I++ G
Sbjct: 16 ELQEYYRKLFGKEA-EGIMASLRTPVKKYYIRVNTLKTSRE----KLMRILRREG----- 65
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVL 137
+ + P L+ ++ + GP+ D YEP K V ++ +E+V
Sbjct: 66 -------------LKPKRSPYLKEGIYFEREGPNFPD-DYEPGL--KVVRANKFASESVY 109
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFER 197
+GA +Y PGV+ ++ GD V + DP
Sbjct: 110 QGANLYAPGVLQADRSIKPGDEVEIR---------------------------DP----- 137
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV---LEGEIFLQNLPSIVTA 254
GL +G G A MS + ++ G+AV++ F+LPS ++ EG + Q+LPS+V A
Sbjct: 138 RGLLVGIGIAKMSAKEMIVSTRGLAVEVTTPKFKLPSLSELESFKEGLFYAQSLPSMVVA 197
Query: 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
H L+P + E I+DM AAPGGKT+ IA LL++ GE++A+D+S N++ +++ +G+K +
Sbjct: 198 HVLEPSEEELIIDMAAAPGGKTSHIAQLLQNRGEIIAIDKSRNRLRKMEEELKRLGVKNV 257
Query: 315 TTYKLDALK 323
++DA K
Sbjct: 258 KLIRMDARK 266
>gi|389851763|ref|YP_006353997.1| nol1-nop2-sun family nucleolar protein III [Pyrococcus sp. ST04]
gi|388249069|gb|AFK21922.1| nol1-nop2-sun family nucleolar protein III [Pyrococcus sp. ST04]
Length = 385
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 153/307 (49%), Gaps = 61/307 (19%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
++++Y+ R +G + I K L P + IRVNTLK + D +I++L
Sbjct: 10 ELQDYYRRLFGPEA-DEIMKKLREPVEHYYIRVNTLKISRDKLIEEL------------- 55
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVL 137
+ + + P L ++ GP+ D Y P+ P V V++ AE+V
Sbjct: 56 ---------KKEGLRPRRSPYLSEGLYFVREGPNFPD-DYNPELP--TVTVNKFAAESVY 103
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFER 197
+GA +Y PGV+ +++GD V + DP
Sbjct: 104 QGAMLYAPGVLKADKGIKEGDEVQIR---------------------------DP----- 131
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVL---EGEIFLQNLPSIVTA 254
GL +G G A M + A+ G+AV++ F+LPS ++ +G + Q+LPS++TA
Sbjct: 132 RGLLVGIGIARMDYREMIEATRGLAVEVTLPKFKLPSLSELKSFEKGYFYPQSLPSMITA 191
Query: 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
LDP++ + I+DM AAPGGKTT +A LL++ GE++A+D+S N++ +++ +G+K +
Sbjct: 192 RVLDPKEEDVIIDMAAAPGGKTTHMAQLLQNRGEIIAIDKSKNRLKKMEENLKRLGVKNV 251
Query: 315 TTYKLDA 321
++DA
Sbjct: 252 KLVQMDA 258
>gi|195127777|ref|XP_002008344.1| GI13435 [Drosophila mojavensis]
gi|193919953|gb|EDW18820.1| GI13435 [Drosophila mojavensis]
Length = 443
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 139/281 (49%), Gaps = 41/281 (14%)
Query: 49 RVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGS 108
R+NTL+T+ D KL + S A + +K +IP + + +
Sbjct: 44 RINTLRTSVADYKLKLETKLSALYGSSAPLVYGLK-----------EIPEMLCISPLDT- 91
Query: 109 GPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQ 168
T D Y D KE+IV C AVLRGA +Y PGV+A S + ++V V +
Sbjct: 92 ---TTDNKY--DDCRKELIVDTSCGAAVLRGAHIYAPGVLAMESGTQLHELVNVFADLP- 145
Query: 169 PTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASE----GIAVD 224
G +G+ T Y ++IG G +M R ++ E GIAV
Sbjct: 146 -------------GKCKRGTAT--RYDCNEKIFIGVGEVLMQRHQLYNNKEQPASGIAVR 190
Query: 225 MHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLR 284
M + +P+ D+ + + LQNLPS+V LDPQ GERILDMCAAPG KTT +A L+
Sbjct: 191 MQTNVSGVPTLGDLSDEDALLQNLPSMVCVRVLDPQPGERILDMCAAPGNKTTHMAELMC 250
Query: 285 DEGEVVAVDRSHNKVMDI-QKLAAEMGLKCITTYKLDALKA 324
+ G ++A+D S ++V + +KLA CIT ++ DA KA
Sbjct: 251 NRGTIIALDNSASRVRSMTEKLA---NYTCITAHQFDATKA 288
>gi|355782677|gb|EHH64598.1| Putative methyltransferase NSUN6 [Macaca fascicularis]
Length = 416
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 141/295 (47%), Gaps = 56/295 (18%)
Query: 8 SYSPLLRWNPQVEEYFIRAY-------------GADHFSRISKALTRPSCYSCIRVNTLK 54
S P + P+VE Y ++ F + K L+ P ++ +RVNT
Sbjct: 2 SIFPKISLRPEVENYLKESFVNKEIVTALGKQEAERKFETLLKHLSHPPSFTTVRVNTHL 61
Query: 55 TTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTID 114
+ V LL +Q + ++ Q P L+ V+ + GP I
Sbjct: 62 ASVQHVKNLLLDELQK--------------QFNGLSVPILQHPDLQDVLLIPVIGPKNIK 107
Query: 115 YGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGG 174
K E IV +C AVLRGA VY PG+++ S ++ GDV++V +
Sbjct: 108 ------KQQCEAIVGAQCGNAVLRGAHVYAPGIVSAS--MKAGDVISVYSDI-------- 151
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS---EGIAVDMHNRIFQ 231
+G +G++ F+ + +++G G + +SR IF +G+ + M ++
Sbjct: 152 ------KGKCKKGARE----FDGTKVFLGNGISELSRKEIFNGLPELKGMGIRMTEPVYL 201
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDE 286
PSF +VL +FLQNLPS + H L+PQ GE+ILD+CAAPGGKTT IA+L+ D+
Sbjct: 202 SPSFDNVLPRYLFLQNLPSALVTHVLNPQPGEKILDLCAAPGGKTTHIAALMHDQ 256
>gi|240102348|ref|YP_002958656.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus gammatolerans EJ3]
gi|239909901|gb|ACS32792.1| tRNA/rRNA cytosine-C5-methylase, putative [Thermococcus
gammatolerans EJ3]
Length = 389
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 152/309 (49%), Gaps = 61/309 (19%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
++ EY+ +G++ I +L P IRVNTLKT+ D KL+ I++ G
Sbjct: 16 ELREYYRELFGSEA-EEIMASLRTPVEKYYIRVNTLKTSRD----KLMRILRREG----- 65
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVL 137
+ + P L+ ++ + GP+ D YEP K V ++ +E+V
Sbjct: 66 -------------LKPKRSPYLKEGIYFEREGPNFPD-DYEPGV--KVVRANKFASESVY 109
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFER 197
+GA +Y PGV+ + GD V + DP
Sbjct: 110 QGANLYAPGVLQADKSIRPGDEVEIR---------------------------DP----- 137
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVL---EGEIFLQNLPSIVTA 254
GL +G G A MS + + G+AV++ F+LPS ++ EG + Q+LPS+V A
Sbjct: 138 RGLLVGIGIAKMSAKEMVVSMRGLAVEVTLPKFRLPSLSELQSFKEGLFYAQSLPSMVVA 197
Query: 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
H L+P + E I+DM AAPGGKT+ IA LL++ GE++A+D+S N++ +++ +G+K +
Sbjct: 198 HVLEPSEEELIIDMAAAPGGKTSHIAQLLQNRGEIIAIDKSRNRLRKMEEELKRLGVKNV 257
Query: 315 TTYKLDALK 323
++DA K
Sbjct: 258 RLIRMDARK 266
>gi|341582537|ref|YP_004763029.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus sp. 4557]
gi|340810195|gb|AEK73352.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus sp. 4557]
Length = 383
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 154/310 (49%), Gaps = 63/310 (20%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
++ EY+ R +G + I +L P IRVNTLKT+ KL+AI++ G
Sbjct: 10 ELREYYRRLFG-EEAEDIMASLRTPVEKYYIRVNTLKTSRG----KLMAILRKEG----- 59
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCA-EAV 136
+ + P L+ ++ + GP+ D YEP P V+ + K A E+V
Sbjct: 60 -------------LKPKRSPYLKEGIYFEREGPNFPD-DYEPGLP---VVRANKFASESV 102
Query: 137 LRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFE 196
+GA +Y PGV+ ++ GD V + DP
Sbjct: 103 YQGAMLYAPGVLQADKKIKPGDEVEIR---------------------------DP---- 131
Query: 197 RSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV---LEGEIFLQNLPSIVT 253
GL +G G A MS + ++ G+AV++ F+LPS ++ EG + Q+LPS+V
Sbjct: 132 -RGLLVGIGVARMSAKEMIVSTRGLAVEVTLPKFKLPSLSELESFKEGLFYAQSLPSMVV 190
Query: 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313
AH L+P + E I+DM AAPGGKT+ IA L+++ GE++A+D+S N++ +++ +G+K
Sbjct: 191 AHVLEPSEEELIVDMAAAPGGKTSHIAQLMQNRGEIIAMDKSKNRLKKMEEELKRLGVKN 250
Query: 314 ITTYKLDALK 323
+ +D+ K
Sbjct: 251 VKPIHMDSRK 260
>gi|212224781|ref|YP_002308017.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus onnurineus NA1]
gi|212009738|gb|ACJ17120.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus onnurineus NA1]
Length = 383
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 153/310 (49%), Gaps = 63/310 (20%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
+++EY+ R +G + I +L P IRVNTLKT+ KL+ I++ G
Sbjct: 10 ELKEYYRRLFG-EEAEEIMASLRTPVEKYYIRVNTLKTSRS----KLMRILRKEG----- 59
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCA-EAV 136
+ + P LE ++ + GP+ D YEP P V+ + K A E+V
Sbjct: 60 -------------LKPKRSPYLEEGIYFEREGPNFPD-DYEPGLP---VVRANKFASESV 102
Query: 137 LRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFE 196
+GA +Y PGV+ ++ GD V + DP
Sbjct: 103 YQGAMLYAPGVLQADKKIKPGDEVEIR---------------------------DP---- 131
Query: 197 RSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV---LEGEIFLQNLPSIVT 253
GL +G G A MS + ++ GIAV++ F+LPS ++ EG + Q+LPS+V
Sbjct: 132 -RGLLVGIGIARMSAKEMIVSTRGIAVEVTLPKFRLPSLSELESFKEGLFYAQSLPSMVV 190
Query: 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313
A L+P + E I+DM AAPGGKT+ IA L+++ GE++A+D+S N++ +++ +G+K
Sbjct: 191 ARILEPSEEELIIDMAAAPGGKTSHIAQLMQNRGEIIAIDKSKNRLRKMEEELKRLGVKN 250
Query: 314 ITTYKLDALK 323
+ +D+ K
Sbjct: 251 VKLIHMDSRK 260
>gi|195496828|ref|XP_002095858.1| GE22645 [Drosophila yakuba]
gi|194181959|gb|EDW95570.1| GE22645 [Drosophila yakuba]
Length = 440
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 122/238 (51%), Gaps = 28/238 (11%)
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
KE++V C A+LRGA +Y PGV+A + E+ ++V V LDG RG
Sbjct: 102 KEIMVDSSCGAALLRGAHIYAPGVLAMECNTEREELVNVYA-----DLDGK----CKRGA 152
Query: 184 VLQGSQTDPYYFERSGLYIGQGTAMMSRAGIF----RASEGIAVDMHNRIFQLPSFYDVL 239
V + Y +++G G +M R +F + + G+AV+M + + +PS D+
Sbjct: 153 VKR-------YESPHKVFLGTGKVLMQRYQLFNNADKPATGVAVEMQSTVSGVPSLGDLS 205
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+ LQNLPSIV LDPQ GERILDMCAAPG KT+ IA L+ D G VVA+D S ++V
Sbjct: 206 SEDGLLQNLPSIVCVRVLDPQPGERILDMCAAPGNKTSHIAELIGDGGSVVALDNSASRV 265
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRK------NESNDEPNMCNSKDNNYITSQTS 351
+ L K IT + D+ KA+ + E P C S D I + S
Sbjct: 266 RSM--LLKLKHYKSITAHVFDSTKALAPEAPSAPFGEFTAPPFPCASFDRILIDAPCS 321
>gi|194876441|ref|XP_001973776.1| GG16283 [Drosophila erecta]
gi|190655559|gb|EDV52802.1| GG16283 [Drosophila erecta]
Length = 439
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 117/207 (56%), Gaps = 25/207 (12%)
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
KE++V C A+LRGA +Y PGV+A S E G++V V LDG RG
Sbjct: 102 KEIMVDTNCGAALLRGAHIYAPGVLAMESCTE-GELVNVYA-----DLDGK----CKRGA 151
Query: 184 VLQGSQTDPYYFERSGLYIGQGTAMMSRAGIF----RASEGIAVDMHNRIFQLPSFYDVL 239
V + Y + +++G G +M R +F + + G+AV+M + + +PS D+
Sbjct: 152 VKR-------YESPNKVFLGTGKVLMQRYQLFNNADKPASGVAVEMQSNVSGVPSLGDLS 204
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+ LQNLPSIV LDPQ GERILDMCAAPG KT+ IA L+ D G VVA+D S ++V
Sbjct: 205 CEDGLLQNLPSIVCVRVLDPQPGERILDMCAAPGNKTSHIAELMGDWGSVVALDNSASRV 264
Query: 300 MDIQKLAAEMG-LKCITTYKLDALKAV 325
+ + ++G K I T+ D+ KAV
Sbjct: 265 ---RSMLPKLGNYKSIKTHVFDSTKAV 288
>gi|6692692|gb|AAF24826.1|AC007592_19 F12K11.10 [Arabidopsis thaliana]
Length = 365
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 86/121 (71%), Gaps = 2/121 (1%)
Query: 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTY 317
DPQKGERILDMCAAPGGKTTAIA L+ DEGE+VA DRSHNKV+ +Q L+AEMG CITT
Sbjct: 21 DPQKGERILDMCAAPGGKTTAIAILMNDEGEIVAADRSHNKVLVVQNLSAEMGFTCITTC 80
Query: 318 KLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEK 377
KLDALK+V N+ + N +++ +TS + + ++E+ S+ + DKSC++
Sbjct: 81 KLDALKSVCLPTTLNESTILINGDNSSSMTSHS--ELSSNEEMTSVTSRRSEADKSCEKN 138
Query: 378 G 378
G
Sbjct: 139 G 139
>gi|57642057|ref|YP_184535.1| tRNA/rRNA cytosine-C5-methylase NOL1/NOP2/Sun family protein
[Thermococcus kodakarensis KOD1]
gi|57160381|dbj|BAD86311.1| tRNA/rRNA cytosine-C5-methylase, NOL1/NOP2/Sun family, containing
RNA-binding PUA domain [Thermococcus kodakarensis KOD1]
Length = 383
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 154/309 (49%), Gaps = 61/309 (19%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
++ EY+ + +G++ I +L P IRVNTLKT+ ++++
Sbjct: 10 ELREYYRKLFGSEA-EEIMASLRTPVEKYYIRVNTLKTSRSELMR--------------- 53
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVL 137
RL+ + + P LE ++ + GP+ D Y+P K+V+ ++ +E+V
Sbjct: 54 -------RLRREGLKPKRSPYLEEGIYFEREGPN-FDDDYDPGL--KKVVANKFASESVY 103
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFER 197
+GA +Y PGV+ ++ GD V + DP
Sbjct: 104 QGAMLYAPGVLKADKGIKPGDEVEIR---------------------------DP----- 131
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV---LEGEIFLQNLPSIVTA 254
GL +G G A MS + A+ G+AV++ F+LPS ++ EG + Q+LPS+V +
Sbjct: 132 RGLLVGIGIARMSGKEMITATRGLAVEVTLPKFKLPSLSELESFKEGLFYAQSLPSMVAS 191
Query: 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
L+P + + I+DM AAPGGKT+ IA L+++ GE++A+D+S N++ +++ +G+K +
Sbjct: 192 RVLEPSEEDLIIDMAAAPGGKTSHIAQLMQNRGEIIAIDKSRNRLRKMEEELKRLGVKNV 251
Query: 315 TTYKLDALK 323
+DA K
Sbjct: 252 RLIHMDARK 260
>gi|195019305|ref|XP_001984952.1| GH16775 [Drosophila grimshawi]
gi|193898434|gb|EDV97300.1| GH16775 [Drosophila grimshawi]
Length = 449
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 112/209 (53%), Gaps = 27/209 (12%)
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
K+VIV C A+LRGA ++ PGV+A S+ + ++V V + G
Sbjct: 103 KQVIVDTSCGAALLRGAHIFAPGVLAMESNTQLQELVNVYADLP--------------GK 148
Query: 184 VLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASE-------GIAVDMHNRIFQLPSFY 236
+G+ T Y +++G G M R +++ +E GIAV M I +P+
Sbjct: 149 CKRGTATR--YVCDEKIFLGVGQVQMQRHQLYKNNEKEESSPTGIAVRMQRNISGVPTLG 206
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
D+ + LQNLPSIV L PQ GERILDMCAAPG KTT +A L+ D G +VA+D S
Sbjct: 207 DLSDANGLLQNLPSIVCVRVLGPQPGERILDMCAAPGNKTTHMAELMGDVGTIVALDNSA 266
Query: 297 NKVMDIQ-KLAAEMGLKCITTYKLDALKA 324
N++ +Q KLA CI T++ DA KA
Sbjct: 267 NRLRAMQSKLA---NYSCIETHQFDATKA 292
>gi|337285025|ref|YP_004624499.1| nol1-nop2-sun family nucleolar protein III [Pyrococcus yayanosii
CH1]
gi|334900959|gb|AEH25227.1| nol1-nop2-sun family nucleolar protein III [Pyrococcus yayanosii
CH1]
Length = 384
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 154/307 (50%), Gaps = 61/307 (19%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
+++ Y+ +GA+ I +AL P + IRVNTLK + + ++++L
Sbjct: 9 ELQRYYRGLFGAEA-DEIMRALREPVEHYYIRVNTLKISREKLMEEL------------- 54
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVL 137
+ +S + P L ++ + GP+ D Y+P+ P V+V++ AE+V
Sbjct: 55 ---------KREGLSPKRSPYLPEGLYFEREGPNFPD-DYDPELP--TVVVNKYAAESVY 102
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFER 197
+GA +Y PGV+ +++GD V + DP
Sbjct: 103 QGAMLYAPGVLKADKGIKEGDEVQIR---------------------------DP----- 130
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVL---EGEIFLQNLPSIVTA 254
GL +G G A M + A+ G+AV++ F+LPS ++ +G + Q+LPS++TA
Sbjct: 131 RGLLVGIGIARMDYREMVMATRGLAVEVTLPKFKLPSLSELESFEKGYFYPQSLPSMITA 190
Query: 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
L+P + + I+DM AAPGGKT+ IA LL++ GE++A+D+S N++ ++ +G+K +
Sbjct: 191 RILEPSEEDLIIDMAAAPGGKTSHIAQLLQNRGEIIAIDKSENRLKKMKDNLKRLGVKNV 250
Query: 315 TTYKLDA 321
+DA
Sbjct: 251 RLIHMDA 257
>gi|332158464|ref|YP_004423743.1| nol1-nop2-sun family nucleolar protein III [Pyrococcus sp. NA2]
gi|331033927|gb|AEC51739.1| nol1-nop2-sun family nucleolar protein III [Pyrococcus sp. NA2]
Length = 388
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 153/307 (49%), Gaps = 61/307 (19%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
++++Y+ R +G + I + L P + IRVNTLK T + +I++L
Sbjct: 12 ELQDYYRRLFGREA-DEIMRKLREPVEHYYIRVNTLKITREKLIEEL------------- 57
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVL 137
+ + + P L ++ GP+ D ++P P V+ ++ AE+V
Sbjct: 58 ---------KKEGLRPFRSPYLSEGLYFVREGPNFPD-DFDPKLP--TVVANKYAAESVY 105
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFER 197
+GA +Y PGV+ +++GD V + DP
Sbjct: 106 QGAMLYAPGVLKADKGIKEGDEVQIR---------------------------DP----- 133
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVL---EGEIFLQNLPSIVTA 254
GL +G G A M + A++G+AV++ F+LPS ++ +G + Q LPS+VTA
Sbjct: 134 RGLLVGIGIARMDYREMIEATKGLAVEVTLPKFKLPSLSELKSFEKGYFYPQGLPSMVTA 193
Query: 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
L+P++ + I+DM AAPGGKTT IA LL++ GE++A+D+S N++ +++ +G+K +
Sbjct: 194 RILEPREDDVIIDMTAAPGGKTTHIAQLLQNRGEIIAIDKSKNRLKKMEENLKRLGVKNV 253
Query: 315 TTYKLDA 321
++DA
Sbjct: 254 KLIQMDA 260
>gi|325186979|emb|CCA21523.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 463
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 152/315 (48%), Gaps = 42/315 (13%)
Query: 19 VEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADV 78
VE+ AYG+ + I KAL P + IR++T + + D QKL
Sbjct: 17 VEDALQAAYGSSKWDSIKKALAYPPQETTIRIHTTQCSPQDAHQKL-------------- 62
Query: 79 ASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHT-IDYGYEPDKPPKEVIVSRKCAEAVL 137
S+ N ++ + + ++ + P+T + Y YE +IV R C EAVL
Sbjct: 63 --SMALNAINPQLTAQKHALIHEIIQIPSMHPNTSLKYDYEK----ASLIVDRLCGEAVL 116
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFER 197
RG+ ++ GVM ++ V + V ++ L G L RG
Sbjct: 117 RGSDIFARGVMCLTAGCSANVSVNILVDLDHKNLRGS-DLNAHRG--------------- 160
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIF-LQNLPSIVTAHA 256
L+IG G MSR I +A G+AV R+ + LE ++F LQ PS + H
Sbjct: 161 RKLFIGVGRTRMSRIEILKADRGLAVSDIVRVCHNAPPLNGLESKVFYLQQFPSAMVGHV 220
Query: 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL--KCI 314
+ PQ + ILDMCAAPGGKTT +A+L+ +G ++AVDRS KV +++L ++GL + I
Sbjct: 221 IHPQNDDYILDMCAAPGGKTTHMANLM-TKGLIIAVDRSRRKVGALKRLLQDLGLGKRVI 279
Query: 315 TTYKLDALKAVRRKN 329
+K D+ + +R K+
Sbjct: 280 AIHK-DSTQLLRLKS 293
>gi|321456480|gb|EFX67587.1| hypothetical protein DAPPUDRAFT_63836 [Daphnia pulex]
Length = 449
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 149/300 (49%), Gaps = 53/300 (17%)
Query: 37 KALTRPSCYSCIRVNTLKTTTD---DVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISE 93
K L P ++ IRVNT+ T+ + D I++ L+++ S V K
Sbjct: 25 KHLKTPPHFTIIRVNTVTTSKEILRDEIEEALSMM----ISPPVVQFHHK---------- 70
Query: 94 SQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSH 153
+ ++ VK + H I+ EP P V+V CA A+LRGA Y PG+ A +
Sbjct: 71 -----VHDILVVKSN--HAIE-KVEPIHP--HVMVGLGCAIAILRGANAYSPGITAIPNG 120
Query: 154 VEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAG 213
V GD V+V G G +G + +E ++G G + +R
Sbjct: 121 VVIGDKVSV--------------FGDLLGQCKRGWNKE---YEGKKYFVGNGLLLQNRQD 163
Query: 214 IFRAS--EGIAVDMHNRIFQLPSFYDVLEGEI-------FLQNLPSIVTAHALDPQKGER 264
+F +G+A++M +F PS D+L FLQNLPS++ HAL+PQ
Sbjct: 164 LFSVGVPKGLAINMIEPLFYCPSIGDILLDNKTIGFQKGFLQNLPSVLCGHALNPQSHHL 223
Query: 265 ILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324
+LD+CAAPGGKTT I SL+ ++G V+A+D+S +K+ IQ+ + ++GL IT + D+ A
Sbjct: 224 VLDLCAAPGGKTTHIGSLMENKGSVIALDKSASKIKQIQENSEKLGLTNITAFVQDSTTA 283
>gi|397568241|gb|EJK46037.1| hypothetical protein THAOC_35319 [Thalassiosira oceanica]
Length = 484
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 154/333 (46%), Gaps = 44/333 (13%)
Query: 19 VEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADV 78
V ++ G S I + +T+ +C RVN LK++ D+V+ L + S
Sbjct: 19 VRDHLSAQCGDALLSSILERMTQSPADTCCRVNLLKSSVDEVMDALREYVIESRERRCVH 78
Query: 79 ASSVKGR--LQNGTI--SESQIPGLEYVVFVKGSGP-------------HTIDYGYEPDK 121
SVK ++ + +ES + GP + G+
Sbjct: 79 RFSVKRHDVFKDLVLVRAESSDSRSTSGSWYHRRGPPNPEGKDIFPRWLKRTELGWPVSH 138
Query: 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITR 181
+ V+V R C EAVLRGA ++V + + VAV + P++ I R
Sbjct: 139 --RAVVVDRFCGEAVLRGADIFV----------KANEDVAVYADIRAPSVKS-----IAR 181
Query: 182 GTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIF--QLPSFYDVL 239
G VL+ + +++G GT RA +F + G+ V M RI PS +L
Sbjct: 182 GLVLEK-------YSGQCVFLGVGTLCCERAELFSRNSGVGVRM-GRIAGPPQPSLNGIL 233
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+ LQNLPS+ AHAL+P+ G+ I+DMC APGGKT+ IASL+ + G ++A D+S K+
Sbjct: 234 STQHMLQNLPSVAVAHALEPRPGDVIMDMCCAPGGKTSHIASLVGNRGLIIACDKSRKKM 293
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRKNESN 332
++ L MG CI LD+ K V ++E+
Sbjct: 294 LNTAALFQSMGATCIIPLALDSTKCVIDEDETK 326
>gi|390961255|ref|YP_006425089.1| nol1-nop2-sun family nucleolar protein III [Thermococcus sp. CL1]
gi|390519563|gb|AFL95295.1| nol1-nop2-sun family nucleolar protein III [Thermococcus sp. CL1]
Length = 385
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 151/307 (49%), Gaps = 61/307 (19%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
++ EY+ + +G + I +L P IRVNTLKT+ + KL+ I++ G
Sbjct: 12 ELREYYRKLFGKEA-EEIMASLRTPVEKYYIRVNTLKTSRE----KLMRILRREG----- 61
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVL 137
+ + P L+ ++ + GP+ D +EP P V ++ AE+V
Sbjct: 62 -------------LKPKRSPYLKEGIYFEREGPNFPD-DHEPGLPV--VRANKFAAESVY 105
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFER 197
+GA +Y PGV+ ++ GD V + DP
Sbjct: 106 QGAMLYAPGVLQADKKIKPGDEVEIR---------------------------DP----- 133
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV---LEGEIFLQNLPSIVTA 254
GL +G G A MS + ++ G+AV++ F+LPS ++ EG + Q+LPS+V A
Sbjct: 134 RGLLVGIGIARMSAKEMVVSTRGLAVEVTLPKFRLPSLSELESFKEGLFYAQSLPSMVVA 193
Query: 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
H L+P + E I+DM AAPGGKT+ IA L+++ GE++A+D+S N++ ++ +G+K +
Sbjct: 194 HVLEPGEEELIVDMAAAPGGKTSHIAQLMQNRGEIIAMDKSKNRLKKMEGELERLGVKNV 253
Query: 315 TTYKLDA 321
+D+
Sbjct: 254 KPIHMDS 260
>gi|194752568|ref|XP_001958593.1| GF11004 [Drosophila ananassae]
gi|190625875|gb|EDV41399.1| GF11004 [Drosophila ananassae]
Length = 441
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 152/325 (46%), Gaps = 42/325 (12%)
Query: 6 RYSYSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLL 65
RY SP L PQ+E ++ D + P + R+NTL++T D + +L
Sbjct: 2 RYPKSPFLSC-PQLEAEILKVNSTDLAVLLEWLCVAPRTTT-YRINTLRSTVADFKKIVL 59
Query: 66 AIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGP-HTIDYGYEPDKPPK 124
D + GR ++ GL + V P + Y+PD K
Sbjct: 60 -----------DTLVTRYGR------DAPKVYGLNSLPEVLCIDPLDSNRLNYDPDPTLK 102
Query: 125 EVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTV 184
EVIV C A+LRGA +Y PGV+A ++V + + RGT
Sbjct: 103 EVIVDSTCGAALLRGAHIYAPGVLAMEHRTRFEELVNIFADLAG---------RCKRGTA 153
Query: 185 LQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASE---GIAVDMHNRIFQL-PSFYDVLE 240
++ + + +++G+G +M R +F E G+AV+M + I + P ++
Sbjct: 154 VRFNSAE-------KMFLGKGKVLMQRHHLFNDDEPATGVAVEMLSTISDVVPGLGNLSC 206
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
+ LQNLPSIV LDPQ GE +LDMCAAPG KTT IA L+ D+G V+A+D S ++V
Sbjct: 207 ADALLQNLPSIVCVRVLDPQPGENVLDMCAAPGNKTTHIAELMGDQGCVMALDNSKSRVS 266
Query: 301 DIQKLAAEMGLKCITTYKLDALKAV 325
++ + + I + D+ KAV
Sbjct: 267 TMR--SKLNNYRSIQLHVFDSTKAV 289
>gi|47217434|emb|CAG10203.1| unnamed protein product [Tetraodon nigroviridis]
Length = 337
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 86/134 (64%), Gaps = 3/134 (2%)
Query: 195 FERSGLYIGQGTAMMSRAGIFRASE---GIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSI 251
F+ ++G G A M R+ IF + E GI V M ++Q PSF +L +FLQNLPS+
Sbjct: 24 FQGKRAFVGNGVARMDRSRIFCSDEPVKGIGVQMVEPLYQSPSFDQILPSLVFLQNLPSV 83
Query: 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311
V H L P+ GER+LDMCAAPGGKT +A+L+ D+GEVVA+DR NK+ I + A + L
Sbjct: 84 VVGHVLGPRPGERVLDMCAAPGGKTCHMAALMGDQGEVVALDRIKNKINRILENAQVLQL 143
Query: 312 KCITTYKLDALKAV 325
+ I + ++ +AV
Sbjct: 144 RSIKAFCFNSTQAV 157
>gi|409096619|ref|ZP_11216643.1| tRNA/rRNA cytosine-C5-methylase NOL1/NOP2/Sun family protein
[Thermococcus zilligii AN1]
Length = 383
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 151/309 (48%), Gaps = 61/309 (19%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
++ EY+ +G++ I +L P IRVNTLKT+ KL+ +++ G
Sbjct: 10 ELREYYRGLFGSEA-DEIMASLRTPVEKYYIRVNTLKTSR----SKLMEVLKKEG----- 59
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVL 137
+ + P L+ ++ + GP+ D Y P K+V+ ++ AE+V
Sbjct: 60 -------------LKPKRSPYLKEGIYFEREGPN-FDDDYNPGL--KKVVANKFAAESVY 103
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFER 197
+GA +Y PGV+ ++ GD V + DP
Sbjct: 104 QGAMLYAPGVLKADGDIKPGDEVEIR---------------------------DP----- 131
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV---LEGEIFLQNLPSIVTA 254
GL +G G A MS + ++ G+AV++ F+LPS ++ EG + Q+LPS+VTA
Sbjct: 132 KGLLVGVGIARMSAKEMETSTRGLAVEVTLPKFKLPSLSELESFREGLFYAQSLPSMVTA 191
Query: 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
L+P + + ++DM AAPGGKT IA L+ + GE++A+D+S N++ +++ +G+K +
Sbjct: 192 RVLEPGEEDLVIDMAAAPGGKTGHIAQLMGNRGEIIAIDKSRNRLKKMEEELNRLGVKNV 251
Query: 315 TTYKLDALK 323
+D+ K
Sbjct: 252 KLLHMDSRK 260
>gi|193582508|ref|XP_001950228.1| PREDICTED: putative methyltransferase NSUN6-like [Acyrthosiphon
pisum]
Length = 447
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 149/314 (47%), Gaps = 43/314 (13%)
Query: 35 ISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISES 94
+S+ LT S RVNTLK T +V+ + I N RL+N +
Sbjct: 35 VSQWLTSAPLNSYFRVNTLKITPLEVMTSINEQISNLK------------RLKNIEKKQH 82
Query: 95 QI---PGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACS 151
+ L + + +D P K +EVIV ++VLRG+ ++ PG+MA +
Sbjct: 83 SVRVHKHLSDCIVISPMDKSLLDLS--PKK--EEVIVDIATGQSVLRGSHIFAPGIMAMA 138
Query: 152 SHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSR 211
V+ ++V + + G RG YY +++G G A M+R
Sbjct: 139 PEVQVDSFISVYADLAK---------GCKRGY-------QKYYDNPMKMFVGNGIAKMNR 182
Query: 212 AGIFRAS---EGIAVDMHNRIFQLPSFYDVLEGEI-FLQNLPSIVTAHALDPQKGE-RIL 266
+F +GIAV+M + +PSF L E LQNLPS+VT HALD + ++L
Sbjct: 183 RQLFNGDMNPKGIAVEMTDPATGIPSF--TLPNEYGMLQNLPSVVTGHALDVNENNLKVL 240
Query: 267 DMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
DMCAAPG KTT IA L+ ++G + AVD+S K+ ++ G++ + + D+L +V
Sbjct: 241 DMCAAPGNKTTHIAILMNNKGSIDAVDKSKTKLNKVELRCKHFGIQNVKIHHFDSLVSVD 300
Query: 327 RKNESN-DEPNMCN 339
N +N D P N
Sbjct: 301 LNNINNSDRPPFKN 314
>gi|422295632|gb|EKU22931.1| hypothetical protein NGA_0447900, partial [Nannochloropsis gaditana
CCMP526]
Length = 297
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 103/189 (54%), Gaps = 17/189 (8%)
Query: 123 PKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRG 182
P V+V R C EAVLRGA V+V GV + S+ + G V + + + + + RG
Sbjct: 83 PFIVVVDRLCGEAVLRGADVFVRGVWSASAGIASGSRVLLLMDLHRHS---------QRG 133
Query: 183 TVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRI-FQLPSFYDVLEG 241
+ Q + + IGQG A++ RA + A+ G+ + + +R+ Q P L G
Sbjct: 134 CLYADYQGE-------AICIGQGVALVPRAELVTATHGLGIRVTHRMGPQAPPLNGFLPG 186
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMD 301
+F QNLPS++ H L P G ++D+CA PGGK T +A+L+R EG VVA DRS K+
Sbjct: 187 RLFPQNLPSLLVGHVLAPLPGSTVIDLCACPGGKATHLATLMRGEGVVVACDRSRKKIKA 246
Query: 302 IQKLAAEMG 310
+Q L MG
Sbjct: 247 LQALGERMG 255
>gi|305663689|ref|YP_003859977.1| Fmu (Sun) domain-containing protein [Ignisphaera aggregans DSM
17230]
gi|304378258|gb|ADM28097.1| Fmu (Sun) domain protein [Ignisphaera aggregans DSM 17230]
Length = 390
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 139/291 (47%), Gaps = 64/291 (21%)
Query: 25 RAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKG 84
R YG D + +A+T+P +RVNTLKT+ ++I +L +G
Sbjct: 18 RVYG-DFYRDFLEAITKPGSRLYLRVNTLKTSVGEIIDRL------------------RG 58
Query: 85 RLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYV 144
R + + E L +++ GP+ ++ K+V+V + AE+V G+ +YV
Sbjct: 59 RGIDVYVDEE----LGEAIYIPIQGPYKVELH------DKKVVVDKYAAESVYLGSHLYV 108
Query: 145 PGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQ 204
PGV+ CSS +EKGD V++ +G+ +G+
Sbjct: 109 PGVVKCSSDIEKGDEVSI--------------------------------VSENGVVVGE 136
Query: 205 GTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV---LEGEIFLQNLPSIVTAHALDPQK 261
G AM+S + + +G+AV +++ P ++ EG I+ Q+LP++ + +DP+
Sbjct: 137 GIAMLSCSEMLERKKGLAVKTIRSVYRAPPIRELPEYREGLIYPQSLPAMYVSRVVDPKP 196
Query: 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312
GE I+DMCAAPGGKT + L R + + A D S ++ +++ +G +
Sbjct: 197 GEIIVDMCAAPGGKTGHMVELSRGKAYIFAFDHSRKRIEEMKNTLDRLGYR 247
>gi|219121812|ref|XP_002181253.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407239|gb|EEC47176.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 435
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 143/318 (44%), Gaps = 56/318 (17%)
Query: 31 HFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEA---------DVAS- 80
H ++ A+ S RVNT++ T +V+ KL+ + E VA+
Sbjct: 50 HLEKVLAAMKVSPRTSTFRVNTIRATRTEVVDKLVLAMNEWAEREGLCTPNPLPISVAAH 109
Query: 81 -------SVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKE-------- 125
SV T+S +IP L+ + S +G E + +
Sbjct: 110 AVLEDIVSVDIAQSPTTLSSCRIPPLQVELDTDSS------FGDEARRARRHRLGWPTTC 163
Query: 126 --VIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGT 183
++ R C EAVLRG+ V+V G++A + G +AV + QP W RG
Sbjct: 164 KVIVCDRLCGEAVLRGSHVFVRGILAADPSIRVGQALAVYADLPQPQ-RPSW----PRGL 218
Query: 184 VLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEI 243
++ + + +++G G A + A F DM LP VL+
Sbjct: 219 AVES-------YTGTCVFVGIGQACCTHASSF--------DMGP---LLPPLSGVLDTHA 260
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
FLQNLPS V HAL+PQ G+ ILD+CAAPGGK + +AS +++ ++A DRS +KV+ ++
Sbjct: 261 FLQNLPSTVVVHALNPQPGDTILDLCAAPGGKASHVASFTKNQAVILAADRSRSKVVAMK 320
Query: 304 KLAAEMGLKCITTYKLDA 321
+ +G I L+A
Sbjct: 321 QRFLALGCTSIVPLHLNA 338
>gi|270013278|gb|EFA09726.1| hypothetical protein TcasGA2_TC011859 [Tribolium castaneum]
Length = 425
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 110/214 (51%), Gaps = 23/214 (10%)
Query: 119 PDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLG 178
P K KE++V C AVLRGA +Y PGV+ S+++ GD V++ V +++ G L
Sbjct: 99 PQKHNKEIVVDAVCGAAVLRGAHIYAPGVIGMMSNIQIGDNVSIYVDLDKKCKKGFLKL- 157
Query: 179 ITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIF--RASEGIAVDMHNRIFQLPSFY 236
G +T +IG G ++ R +F G+A+ M I P
Sbjct: 158 ------YNGKKT----------FIGNGEVILGRNHLFCETPQTGLAIKMIETISSCPPVL 201
Query: 237 D---VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
+ G LQNLPSI+ H L P + ILDMCA+PG KTT IA+LL+++G +VA+D
Sbjct: 202 GDNFLPPGAALLQNLPSIICTHVLAPCPNDTILDMCASPGNKTTHIAALLKNQGRLVAID 261
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR 327
++ KV +++ G K + + D+ K + R
Sbjct: 262 KTPTKVAQLRQRCENFGAK-VEILQTDSTKLLDR 294
>gi|348549914|ref|XP_003460778.1| PREDICTED: putative methyltransferase NSUN6-like [Cavia porcellus]
Length = 314
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 74/109 (67%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
+GI + M I+ PSF +VL G +FLQNLP+ V AH L PQ GER+LD+CAAPGGK T
Sbjct: 30 QGIGIRMTEPIYLSPSFDNVLPGYLFLQNLPTAVVAHVLHPQPGERVLDLCAAPGGKATH 89
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR 327
IA+L+ D+GE +A+D+ NKV I++ A +GL I + D KA++
Sbjct: 90 IAALMHDQGEAIALDKIPNKVEKIKQNALLLGLNSIKAFCFDGTKALKH 138
>gi|357604419|gb|EHJ64179.1| hypothetical protein KGM_18459 [Danaus plexippus]
Length = 421
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 110/215 (51%), Gaps = 24/215 (11%)
Query: 125 EVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTV 184
EV+V CA AVLRGA VY PGV+ ++ + V + G G
Sbjct: 76 EVVVDSMCAAAVLRGAHVYAPGVLGLPTNCSLNERVDI--------------YGDLDGHC 121
Query: 185 LQGSQTDPYYFERSGLYIGQGTAMMSRAGIFR---ASEGIAVDMHNRIFQLPSFYDVL-- 239
+G + + ++ +Y+G G M R +F GIA++ +LP + +
Sbjct: 122 KRGLKVE---YKGRKIYVGTGYIRMLRYQLFDDGVQPNGIAIETLLPASRLPVINESMYP 178
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + LQNLPSI+T ++ Q E ILDMCA+PG KTT +A + ++ + A+D++ KV
Sbjct: 179 KGHLVLQNLPSIITGWVVNAQPNEHILDMCASPGNKTTHLAEMSNNQAHITAIDKTDKKV 238
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDE 334
+ I++ G+ C+ T+ D+ K +E+N+E
Sbjct: 239 IKIRQSCETQGVTCVHTFAFDSTKC--HSDEANNE 271
>gi|307198376|gb|EFN79318.1| Putative methyltransferase NSUN6 [Harpegnathos saltator]
Length = 442
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 113/216 (52%), Gaps = 30/216 (13%)
Query: 121 KPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGIT 180
K P E+IV KC AVLRG+ VY PG+M SS + V+V +
Sbjct: 95 KYPDEIIVDAKCGAAVLRGSHVYAPGIMGISSGLSIDTKVSVFADIT------------- 141
Query: 181 RGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIF----RASEGIAV---DMHNRIFQLP 233
G +GS PY + S +Y+G G +R +F + GIAV D+ +RI QL
Sbjct: 142 -GRCKKGS-IQPYA-DDSKMYLGNGVLRQTRKQLFGKTAKNPSGIAVIMTDVISRIPQLN 198
Query: 234 SFYDVLEGE----IFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEV 289
+ D E LQNLPSIV + L+PQ GE ILDMCAAPG KTT I+ L+R +G +
Sbjct: 199 ATADPPESLRPLCALLQNLPSIVCSLVLNPQPGETILDMCAAPGNKTTHISYLMRGQGMI 258
Query: 290 VAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325
+A++++ KV +++ + +K + DA AV
Sbjct: 259 IALEKNPGKVARLREKCNDGNVK---IFCCDAANAV 291
>gi|167520882|ref|XP_001744780.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777111|gb|EDQ90729.1| predicted protein [Monosiga brevicollis MX1]
Length = 305
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 135 AVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYY 194
A+ RGA V+ PG+ + +E G V SVAV D TRG P
Sbjct: 2 AIWRGAHVFAPGIKS----LEAGIVPDSSVAVYADVDDA-----YTRG------HNGPC- 45
Query: 195 FERSGLYIGQGTAMMSRAGIFRASE--GIAVDMHNRIFQ---LPSFYDVLEGEIFLQNLP 249
+ L++G G A ++RA F+ + G+A+ M +FQ LP LE LQNLP
Sbjct: 46 -DHRLLFVGNGIAHVARATFFKDEQPRGLAITMTAAVFQTMDLPP----LEPNAILQNLP 100
Query: 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM 309
S V A AL P+ G R+LDMCAAPGGKT+ I+ LLR G VVA++RS + +++ A +
Sbjct: 101 SCVAARALAPEPGMRVLDMCAAPGGKTSHISLLLRGTGTVVALERSPKRAAQLKEWVASL 160
Query: 310 GLKCITTYKLDALKAVRRKNESNDE 334
G + +++DA K + N +
Sbjct: 161 GCHNVEVHQMDATKCLEGSKGKNSK 185
>gi|332017885|gb|EGI58545.1| Putative methyltransferase NSUN6 [Acromyrmex echinatior]
Length = 461
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 108/216 (50%), Gaps = 25/216 (11%)
Query: 123 PKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRG 182
P E+IV C AVLRG+ VY PGV+ + + V+V V G G+ +
Sbjct: 118 PDEIIVDAICGAAVLRGSHVYAPGVIGMPNGLSINTKVSVFADVA-----GQCKKGLIKP 172
Query: 183 TVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIF----RASEGIAV---DMHNRIFQLPSF 235
Y + +Y+G G +R +F R GIA+ D+ +R+ QL
Sbjct: 173 -----------YANSNKIYLGNGILRQTRKELFCKAARNPRGIAIIMTDVISRVPQLNVN 221
Query: 236 YDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRS 295
+ L LQNLPSIV + L+PQ GE ILDMCAAPG KTT I+ L++ +G ++A++++
Sbjct: 222 NESLRPHALLQNLPSIVCSLVLNPQPGETILDMCAAPGNKTTHISLLMKGQGTIIALEKN 281
Query: 296 HNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNES 331
KV ++ K I + DA KA+ + S
Sbjct: 282 LGKVKRFKEKCENE--KNIKIFCCDATKAIIEREHS 315
>gi|307169943|gb|EFN62452.1| Putative methyltransferase NSUN6 [Camponotus floridanus]
Length = 462
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 113/216 (52%), Gaps = 26/216 (12%)
Query: 123 PKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRG 182
P E+IV C AVLRG+ VY PGV+ + G ++ V+V + G G+ +
Sbjct: 120 PNEIIVDAICGAAVLRGSHVYAPGVIG----MPNGLIINCKVSVFA-DVTGHCKKGLIKP 174
Query: 183 TVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASE----GIAV---DMHNRIFQLPSF 235
Y + +Y+G G +R +F + GIA+ D+ +R+ QL +
Sbjct: 175 -----------YPDSKKMYLGNGILRQTRKELFGKAATNPCGIAIIMSDVISRVPQLNTD 223
Query: 236 YDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRS 295
+ L LQNLPSI+ + L+PQ GE ILDMCAAPG KTT I+ L++ +G+++A++++
Sbjct: 224 NEFLRPYALLQNLPSIICSLVLNPQPGETILDMCAAPGNKTTHISFLMKGQGKIIALEKN 283
Query: 296 HNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNES 331
K ++ + +K + DA KAV + +S
Sbjct: 284 AGKAKRFKEKCNDENIK---IFCYDATKAVVERGDS 316
>gi|119719409|ref|YP_919904.1| Fmu (Sun) domain-containing protein [Thermofilum pendens Hrk 5]
gi|119524529|gb|ABL77901.1| Fmu (Sun) domain protein [Thermofilum pendens Hrk 5]
Length = 389
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 40/197 (20%)
Query: 123 PKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRG 182
P +V V +K AE+V GA V+ PGV + E GD+V+V I G
Sbjct: 93 PGKVYVDKKTAESVYVGANVFAPGVTKVENARE-GDLVSV----------------IAPG 135
Query: 183 TVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPS-----FYD 237
G + +G M + +F +G+AV + +++ S ++D
Sbjct: 136 ----------------GRVVAEGVLSMDPSRVFSERKGLAVRVVRSVYRAVSLRETRYFD 179
Query: 238 VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297
EG I+ Q+LPS+V LDPQ G +LDMCAAPGGKTT A L+ D GEV+AVDR+ +
Sbjct: 180 --EGLIYHQSLPSMVAVRLLDPQPGWTVLDMCAAPGGKTTHAAQLMGDHGEVIAVDRTKS 237
Query: 298 KVMDIQKLAAEMGLKCI 314
KV I + A +GLK +
Sbjct: 238 KVDTIMEHARRLGLKSV 254
>gi|189241190|ref|XP_001810247.1| PREDICTED: similar to GA10764-PA [Tribolium castaneum]
Length = 516
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 48/209 (22%)
Query: 119 PDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLG 178
P K KE++V C AVLRGA +Y PGV+ S+++ GD V++ V +++ G L
Sbjct: 225 PQKHNKEIVVDAVCGAAVLRGAHIYAPGVIGMMSNIQIGDNVSIYVDLDKKCKKGFLKL- 283
Query: 179 ITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV 238
G +T +IG G ++ RA +
Sbjct: 284 ------YNGKKT----------FIGNGEVILGRAAL------------------------ 303
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
LQNLPSI+ H L P + ILDMCA+PG KTT IA+LL+++G +VA+D++ K
Sbjct: 304 ------LQNLPSIICTHVLAPCPNDTILDMCASPGNKTTHIAALLKNQGRLVAIDKTPTK 357
Query: 299 VMDIQKLAAEMGLKCITTYKLDALKAVRR 327
V +++ G K + + D+ K + R
Sbjct: 358 VAQLRQRCENFGAK-VEILQTDSTKLLDR 385
>gi|322801564|gb|EFZ22220.1| hypothetical protein SINV_04379 [Solenopsis invicta]
Length = 463
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 109/216 (50%), Gaps = 26/216 (12%)
Query: 123 PKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRG 182
P E+IV C AVLRG+ VY PG++ + G ++ V+V + G G+ +
Sbjct: 122 PDEIIVDAICGAAVLRGSHVYAPGIIG----MPNGLIINTKVSVFA-DVTGQCKKGLIKP 176
Query: 183 TVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIF----RASEGIAVDMHNRIFQLPSFY-- 236
Y + Y+G G +R +F R G+A+ M + I ++P F
Sbjct: 177 -----------YANSNKAYLGNGILRQTRKELFCKVSRNPCGVAIIMTDVISRIPQFNIN 225
Query: 237 -DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRS 295
+ L LQNLPSI+ + L+PQ E +LDMCAAPG KTT I+ L++ +G ++A++++
Sbjct: 226 DESLRPHALLQNLPSIICSLVLNPQPDETVLDMCAAPGNKTTHISLLMKGQGTIIALEKN 285
Query: 296 HNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNES 331
KV ++ + +K + DA KAV + S
Sbjct: 286 PGKVRRFKEKCNDRNIK---IFCYDATKAVIAREHS 318
>gi|20094206|ref|NP_614053.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
gi|19887231|gb|AAM01983.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
Length = 356
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 125/299 (41%), Gaps = 61/299 (20%)
Query: 38 ALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIP 97
AL P +RVNTLK +DV++ L AS R + ES P
Sbjct: 3 ALRTPVRRYTLRVNTLKADLEDVVECL--------------ASDFPDR----EVRES--P 42
Query: 98 GLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKG 157
EY V ++ GP+ ++ + V+ + AE+V GA +Y PGV+ + +G
Sbjct: 43 YSEYAVEIEVKGPYPVEGNHH------VVVADKFAAESVYVGADLYAPGVVQADPDIRRG 96
Query: 158 DVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRA 217
D V V P G L QG M R
Sbjct: 97 DRVTVVSERGHPVASGEAAL--------------------------QGREMEKR------ 124
Query: 218 SEGIAVDMHNRIFQLPSFYDV---LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGG 274
G AV + F P + G ++ Q LPSI+ AL P+ GE ++D+CAAPGG
Sbjct: 125 DRGTAVRVDRPTFSAPKVRETEAYRRGWVYSQGLPSILAVEALSPEPGETVVDLCAAPGG 184
Query: 275 KTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
K + +A + E ++VA+DRS ++ ++ +G+ + T DA K VRR + D
Sbjct: 185 KCSHVAQITGPESKIVAIDRSAPRLERMEARLRRLGIDWVETVHGDARKVVRRLRGTAD 243
>gi|428181575|gb|EKX50438.1| hypothetical protein GUITHDRAFT_103672 [Guillardia theta CCMP2712]
Length = 311
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 93/174 (53%), Gaps = 35/174 (20%)
Query: 137 LRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQ---TDPY 193
++GAQ++ PG+ A + +GD++AV T D + RG V G Q TD
Sbjct: 1 MQGAQIFAPGIAAAPYSMNQGDLLAVYAD----TTDA-----VQRGGVTAGKQPKATDVV 51
Query: 194 YFERSGLYIGQGTAMMSRAGIF-RASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIV 252
+++G G A M+R G+F + GI + ++ P+
Sbjct: 52 IDTSKSVFLGIGRACMNRNGMFGKDPRGIGI----------------------ESFPAAF 89
Query: 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA 306
T+ L+P+ GER+LDMCAAPGGK+T IA L++D GEVV+ DRS +KV IQ+LA
Sbjct: 90 TSLLLEPKSGERVLDMCAAPGGKSTHIAQLMKDRGEVVSCDRSSSKVEKIQQLA 143
>gi|195377779|ref|XP_002047665.1| GJ11797 [Drosophila virilis]
gi|194154823|gb|EDW70007.1| GJ11797 [Drosophila virilis]
Length = 413
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 79/131 (60%), Gaps = 9/131 (6%)
Query: 200 LYIGQGTAMMSRAGIF-----RASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTA 254
+++G G +M R ++ + GIAV M + + +P+ D+ + LQNLPS+V
Sbjct: 134 IFLGVGQVLMQRHQLYNNNKEQPPSGIAVRMQSNVSGVPTLGDLSDANALLQNLPSMVCV 193
Query: 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG-LKC 313
L PQ GERILDMCAAPG KTT IA L+ D G+++A+D S +++ +Q ++G C
Sbjct: 194 RVLAPQPGERILDMCAAPGNKTTHIAELMGDVGQIIALDNSASRMRAMQ---TKLGNYDC 250
Query: 314 ITTYKLDALKA 324
I ++ DA KA
Sbjct: 251 IQAHQFDATKA 261
>gi|325968037|ref|YP_004244229.1| Fmu (Sun) domain-containing protein [Vulcanisaeta moutnovskia
768-28]
gi|323707240|gb|ADY00727.1| Fmu (Sun) domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 404
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 145/342 (42%), Gaps = 68/342 (19%)
Query: 14 RWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGS 73
R + Q+ +Y ++ + I +++ +P IRVNTLK + +++++
Sbjct: 16 RLDYQLYKYLLQYFSDSELQGIFESIRKPPSKYYIRVNTLKISPEELLK----------- 64
Query: 74 SEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCA 133
L+ ++ Q L ++ GP+ + K V+ +K +
Sbjct: 65 -----------LLREHSVDVYQDKDLPEALWFPVKGPNKVPSAR------KYVLADKKAS 107
Query: 134 EAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPY 193
E+V GA +YVPGV+ + V+KGD V +
Sbjct: 108 ESVYVGANLYVPGVVKMNKDVKKGDEVNIIAP---------------------------- 139
Query: 194 YFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFL---QNLPS 250
+G + G A ++ GIAV ++ +P D+ E E+ L Q+LP+
Sbjct: 140 ----NGEIVAFGIAEVNGDEARSIRRGIAVKTLVSVYNMPKVRDLREYELGLFYDQSLPA 195
Query: 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG 310
H LDP+ G+ I+DM AAPGGKT+ I L + V A DRS NK+ +I + + +G
Sbjct: 196 QWVTHILDPRPGDVIVDMNAAPGGKTSHIVQLGGGKAVVYAFDRSENKIREIIENLSRLG 255
Query: 311 LKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSD 352
+ + ++ + + DEP++ NS D I +D
Sbjct: 256 MDSLYRVEVRDTRFL-----DIDEPDLINSVDKILIDPPCTD 292
>gi|302847922|ref|XP_002955494.1| hypothetical protein VOLCADRAFT_43107 [Volvox carteri f.
nagariensis]
gi|300259117|gb|EFJ43347.1| hypothetical protein VOLCADRAFT_43107 [Volvox carteri f.
nagariensis]
Length = 152
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 55/74 (74%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + LQNLPS+V A AL P G R+LDMCAAPGGKTT +A ++ + GE+VA+DRSH KV
Sbjct: 1 GWVMLQNLPSVVAALALCPPPGSRVLDMCAAPGGKTTLLAQIMGNLGEIVALDRSHAKVS 60
Query: 301 DIQKLAAEMGLKCI 314
+I+ L EMG C+
Sbjct: 61 EIRSLTGEMGATCV 74
>gi|300122180|emb|CBK22754.2| unnamed protein product [Blastocystis hominis]
Length = 244
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 18/172 (10%)
Query: 156 KGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIF 215
KG+ V + V + L G LG+ G + IG+G ++R+ +F
Sbjct: 7 KGERVCIVVNICNTNLPRGSDLGLYDG---------------KNIIIGEGVLELTRSEVF 51
Query: 216 RASEGIAVD-MHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGG 274
G+A+D +H F LP + L ++ +QN PS++T+ LDPQ GE ILD CAAPG
Sbjct: 52 SLESGLAIDQIHRSSFDLPPL-ESLPNDLLMQNFPSLITSRILDPQPGEAILDCCAAPGN 110
Query: 275 KTTAIASLLRDEGEVVAVDRSHNKVMD-IQKLAAEMGLKCITTYKLDALKAV 325
K + + L++D+G V+ +DRS K +D + + + G + + LD K +
Sbjct: 111 KWSHLCMLMQDKGLVLGMDRSRKKAIDNLLAIKQKFGYQSLQIRYLDMTKHL 162
>gi|159040978|ref|YP_001540230.1| Fmu (Sun) domain-containing protein [Caldivirga maquilingensis
IC-167]
gi|157919813|gb|ABW01240.1| Fmu (Sun) domain protein [Caldivirga maquilingensis IC-167]
Length = 398
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 125/282 (44%), Gaps = 63/282 (22%)
Query: 37 KALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQI 96
+++ +P +RVNTLK +TD++++ RL+ I+ +
Sbjct: 43 ESIRKPPRRYYVRVNTLKVSTDELLR----------------------RLKEHGITAYRD 80
Query: 97 PGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEK 156
L+ +++ GP+ + + V+ + +E+V G+ +Y PGV+ + +
Sbjct: 81 EVLDEAIWLPTEGPNRVGASR------RYVVADKYASESVYLGSNLYGPGVLYMPNDIHA 134
Query: 157 GDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFR 216
GD V V +G + G A ++ + R
Sbjct: 135 GDEVNV--------------------------------VSPNGDVVALGVAKINASEFRR 162
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLE---GEIFLQNLPSIVTAHALDPQKGERILDMCAAPG 273
GI V+ +++LP D+ E G + Q+LP+ +DP E I+D+C+APG
Sbjct: 163 GFRGIVVETTESVYRLPKLRDLDEWRFGLFYEQSLPAQWVGRLIDPGPNETIIDLCSAPG 222
Query: 274 GKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCIT 315
GK T +A L ++ ++AVDRS +KV I+ AA +G++ +T
Sbjct: 223 GKATHVAQLSGNKAIIIAVDRSWSKVRQIEGNAARLGVRLMT 264
>gi|159482044|ref|XP_001699083.1| hypothetical protein CHLREDRAFT_177717 [Chlamydomonas reinhardtii]
gi|158273146|gb|EDO98938.1| predicted protein [Chlamydomonas reinhardtii]
Length = 474
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 28/134 (20%)
Query: 214 IFRASEGIAVDMHNRIFQLPS----------------FYDVLEGEIFLQNLPSIVTA--- 254
+FRA EG+A+++ +F++P Y ++ G + +NL + A
Sbjct: 120 MFRAREGLALELVQPVFRVPPAVSECRARGAGAGRFCHYRMVPGSV--RNLVRVERAAPG 177
Query: 255 --HALDPQK-----GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAA 307
HA +P + G R+LDMCAAPGGKTT +A+L+ D GEVVA DR+H KV ++ LA
Sbjct: 178 LGHAAEPAQPGLAPGMRVLDMCAAPGGKTTLMAALMGDVGEVVAFDRTHAKVAEVVALAR 237
Query: 308 EMGLKCITTYKLDA 321
EMG CI +K+DA
Sbjct: 238 EMGATCIKAHKMDA 251
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 9 YSPLLRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVI 61
++P + W+P+VE Y A G + F R + AL RP +C+RVNTL+TT ++V+
Sbjct: 12 FAPKVAWDPEVEAYLRGALGDERFERAAAALCRPPRTTCLRVNTLRTTAEEVV 64
>gi|221480789|gb|EEE19218.1| PUA domain-containing, nucleolar protein, putative [Toxoplasma
gondii GT1]
Length = 613
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 72/127 (56%), Gaps = 7/127 (5%)
Query: 179 ITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV 238
+ RGT L+ + P ++G++ G+G + ++ GIAV+M + I
Sbjct: 322 VLRGTYLRAAL--PERVRKTGIFCGRGIIRQNLGQVYAGKPGIAVEMESAID-----LST 374
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
L + QNLPSIV H L PQ GER+LDMCAAPGGKT +A+L++ G +VAV+RS +
Sbjct: 375 LPACLVAQNLPSIVVGHVLSPQPGERVLDMCAAPGGKTLHLATLMKGHGLIVAVERSKTR 434
Query: 299 VMDIQKL 305
++
Sbjct: 435 AEKLRSF 441
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 126 VIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAV 162
++V R+C +AVLRGA V+ GV+A H+ G++V V
Sbjct: 180 ILVDRRCGQAVLRGAHVFSGGVLASEPHLRVGEMVEV 216
>gi|429216799|ref|YP_007174789.1| tRNA/rRNA cytosine-C5-methylase [Caldisphaera lagunensis DSM 15908]
gi|429133328|gb|AFZ70340.1| tRNA/rRNA cytosine-C5-methylase [Caldisphaera lagunensis DSM 15908]
Length = 390
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 135/299 (45%), Gaps = 65/299 (21%)
Query: 34 RISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISE 93
+I L +P +RVNTLK T ++ L I++ G I
Sbjct: 35 KIINLLIKPPTKFYLRVNTLKITRNE----YLNILKERG------------------IKF 72
Query: 94 SQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSH 153
+ ++Y ++ + SGP+ I Y+ K++ V++ +E++ G+ +Y+PG++ +
Sbjct: 73 YKDENIDYAIYAQISGPYEIPI-YD-----KKIYVNKYASESIYLGSNLYIPGILK-ADK 125
Query: 154 VEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAG 213
++KGD V + F R+ + + G +++
Sbjct: 126 IKKGDKVTI--------------------------------FNRNDIPLASGISIIDWED 153
Query: 214 IFRASEGIAVDMHNRIFQLPSFYDVL---EGEIFLQNLPSIVTAHALDPQKGERILDMCA 270
I+R +G+AV + + +++ P ++ EG I+ Q+LPS+ A DP++G I+DM A
Sbjct: 154 IYRLKKGLAVIVEDSVYKSPKIRELPGFEEGYIYSQSLPSMWVAELADPKEGSIIIDMNA 213
Query: 271 APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKN 329
APGGK IA + ++A+DR +K D+ + +G + D+ A + N
Sbjct: 214 APGGKVGNIAQKVGKNSRIIAIDRP-SKTNDLTEKMKRLGYDWVEVIGGDSRYATQELN 271
>gi|237845131|ref|XP_002371863.1| NOL1/NOP2/sun family protein [Toxoplasma gondii ME49]
gi|211969527|gb|EEB04723.1| NOL1/NOP2/sun family protein [Toxoplasma gondii ME49]
gi|221501454|gb|EEE27230.1| PUA domain-containing, nucleolar protein, putative [Toxoplasma
gondii VEG]
Length = 613
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 72/127 (56%), Gaps = 7/127 (5%)
Query: 179 ITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV 238
+ RGT L+ + P ++G++ G+G + ++ GIAV+M + I
Sbjct: 322 VLRGTYLRAAL--PERVRKTGIFCGRGIIRQNLGQVYAGKPGIAVEMESAID-----LST 374
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
L + QNLPSIV H L PQ GER+LDMCAAPGGKT +A+L++ G +VAV+RS +
Sbjct: 375 LPACLVAQNLPSIVVGHVLSPQPGERVLDMCAAPGGKTLHLATLMKGHGLIVAVERSKTR 434
Query: 299 VMDIQKL 305
++
Sbjct: 435 AEKLRSF 441
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 126 VIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAV 162
++V R+C +AVLRGA V+ GV+A H+ G++V V
Sbjct: 180 ILVDRRCGQAVLRGAHVFSGGVLASEPHLRVGEMVEV 216
>gi|302854610|ref|XP_002958811.1| hypothetical protein VOLCADRAFT_100142 [Volvox carteri f.
nagariensis]
gi|300255831|gb|EFJ40115.1| hypothetical protein VOLCADRAFT_100142 [Volvox carteri f.
nagariensis]
Length = 401
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
Query: 229 IFQLPSFYD-VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEG 287
+F LP +L GE+ LQ LPSIV A L P G +LDMCAAPGGKTT +A ++ +G
Sbjct: 7 LFPLPPARPGILRGEMMLQALPSIVAAMVLSPPPGSTVLDMCAAPGGKTTLLAQIMGGQG 66
Query: 288 EVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVR 326
+VVA+D + KV +I+ LAA+M + C+ Y+ DA+ AV+
Sbjct: 67 KVVAIDCTAAKVSEIKSLAADMDVGGCVEVYQGDAVHAVQ 106
>gi|307596216|ref|YP_003902533.1| Fmu (Sun) domain-containing protein [Vulcanisaeta distributa DSM
14429]
gi|307551417|gb|ADN51482.1| Fmu (Sun) domain protein [Vulcanisaeta distributa DSM 14429]
Length = 406
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 146/346 (42%), Gaps = 76/346 (21%)
Query: 14 RWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGS 73
R + Q+ YF++ + I +++ RP IRVNTL+ + +++++ L
Sbjct: 18 RLDYQLYRYFLQYFSESELESIFESIRRPPGRYYIRVNTLRISPEELMRLL-------RE 70
Query: 74 SEADVASSVKGRLQNGTISESQIPGLEYVVF-VKGSGPHTIDYGYEPDKPP---KEVIVS 129
DV + +P E + F VKG P+K P K V+
Sbjct: 71 RSIDV------------YPDEYLP--EALWFPVKG-----------PNKIPSARKYVLAD 105
Query: 130 RKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQ 189
++ AE+V GA +YVPGV+ + +GD V V
Sbjct: 106 KRAAESVYVGANLYVPGVVRMDEEIRRGDEVNVIAP------------------------ 141
Query: 190 TDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFL---Q 246
+G + G A +S I GIAV ++++P ++ E E+ L Q
Sbjct: 142 --------NGEVVAFGIAEVSNDNIKTTRHGIAVKTLVSVYEMPKVREMREYELGLFYDQ 193
Query: 247 NLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA 306
+LP+ H +DP+ E I+DM AAPGGKT+ + L + V A DRS KV ++ ++
Sbjct: 194 SLPAQWVGHVVDPKPNEVIIDMNAAPGGKTSHVIQLSGGKAIVHAFDRSEGKVREMIEIL 253
Query: 307 AEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSD 352
+G+ + Y+++ + D P++ S D I +D
Sbjct: 254 NRLGMNGL--YRVEVRDT---RYLDIDRPDLIGSADKVLIDPPCTD 294
>gi|401410959|ref|XP_003884927.1| putative NOL1/NOP2/sun family protein [Neospora caninum Liverpool]
gi|325119346|emb|CBZ54899.1| putative NOL1/NOP2/sun family protein [Neospora caninum Liverpool]
Length = 631
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 183 TVLQGSQTD---PYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVL 239
+VLQG+ P ++G++ G+G + ++ G+A++M +R L L
Sbjct: 339 SVLQGTYLRAQLPERVRKTGIFCGRGILRQNMRQVYAEKTGVAIEM-DRAVDLSRLPPCL 397
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
QNLPSIV H L PQ GER+LDMCAAPGGKT +A+L++ +G +VAV+RS +
Sbjct: 398 ----VAQNLPSIVVGHVLAPQPGERVLDMCAAPGGKTLHLATLMKGQGHIVAVERSKTRA 453
Query: 300 MDIQKL 305
++
Sbjct: 454 QKLRSF 459
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 126 VIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAV 162
++V R+C +AVLRGA V+ GV+A H++ G+ V V
Sbjct: 199 ILVDRRCGQAVLRGAHVFAKGVLASEPHLKAGERVDV 235
>gi|347523590|ref|YP_004781160.1| Fmu (Sun) domain containing protein [Pyrolobus fumarii 1A]
gi|343460472|gb|AEM38908.1| Fmu (Sun) domain protein [Pyrolobus fumarii 1A]
Length = 386
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 45/215 (20%)
Query: 99 LEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGD 158
LE ++ GP + + K V+V ++ AE+VL GA VY PGV+ V KGD
Sbjct: 71 LEEAIWFPVEGPFRVP------RVDKRVVVDKRTAESVLLGAHVYAPGVIDMEG-VSKGD 123
Query: 159 VVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRAS 218
V++ E +G+ + G A MS +
Sbjct: 124 --EVNIVAE------------------------------NGVVVAYGVAEMSWDEVREKR 151
Query: 219 EGIAVDMHNRIFQLPSFYDV---LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGK 275
G+AV + F+ PS ++ G I+ Q+LP++ + L+PQ GE ++DMCAAPGGK
Sbjct: 152 RGLAVRVVVSRFRAPSTRELSVWKRGLIYEQSLPAMWASRLLEPQPGEIVVDMCAAPGGK 211
Query: 276 TTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG 310
T + L R + +VA+D S +K I+++ E+G
Sbjct: 212 TGHLVELTRGKARIVAIDHSRSK---IRRMVEELG 243
>gi|284047695|ref|YP_003398034.1| sun protein [Acidaminococcus fermentans DSM 20731]
gi|283951916|gb|ADB46719.1| sun protein [Acidaminococcus fermentans DSM 20731]
Length = 446
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 66/92 (71%), Gaps = 3/92 (3%)
Query: 232 LPSFYDVLEG---EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
LPS D++EG +I++Q+ S++ A LDPQ GER+LD+C+APGGKTT +A ++D+GE
Sbjct: 225 LPSLDDLVEGFGPDIYIQDESSMLDAAVLDPQPGERVLDLCSAPGGKTTHLAQKMQDQGE 284
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
++A+D +K+ +++ A +G+ CI T K D
Sbjct: 285 ILALDLYDHKLDLVRENARRLGIHCIRTEKQD 316
>gi|297618702|ref|YP_003706807.1| RNA methylase, NOL1/NOP2/sun family [Methanococcus voltae A3]
gi|297377679|gb|ADI35834.1| RNA methylase, NOL1/NOP2/sun family [Methanococcus voltae A3]
Length = 322
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 56/84 (66%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
L G F+Q++ S+V AL+PQK ERILDMCAAPGGKTT IA LL +EG + AV+ + N+
Sbjct: 112 LYGYYFMQSISSMVPVIALNPQKNERILDMCAAPGGKTTHIAQLLENEGVIFAVEVNKNR 171
Query: 299 VMDIQKLAAEMGLKCITTYKLDAL 322
+ + MG+K + T D++
Sbjct: 172 IRSLTSNVNRMGIKDVVTINTDSV 195
>gi|227830733|ref|YP_002832513.1| Fmu (Sun) domain-containing protein [Sulfolobus islandicus
L.S.2.15]
gi|229581707|ref|YP_002840106.1| Fmu (Sun) domain-containing protein [Sulfolobus islandicus
Y.N.15.51]
gi|284998246|ref|YP_003420014.1| Fmu (Sun) domain-containing protein [Sulfolobus islandicus L.D.8.5]
gi|385773703|ref|YP_005646270.1| Fmu (Sun) domain-containing protein [Sulfolobus islandicus HVE10/4]
gi|385776338|ref|YP_005648906.1| Fmu (Sun) domain-containing protein [Sulfolobus islandicus REY15A]
gi|227457181|gb|ACP35868.1| Fmu (Sun) domain protein [Sulfolobus islandicus L.S.2.15]
gi|228012423|gb|ACP48184.1| Fmu (Sun) domain protein [Sulfolobus islandicus Y.N.15.51]
gi|284446142|gb|ADB87644.1| Fmu (Sun) domain protein [Sulfolobus islandicus L.D.8.5]
gi|323475086|gb|ADX85692.1| Fmu (Sun) domain protein [Sulfolobus islandicus REY15A]
gi|323477818|gb|ADX83056.1| Fmu (Sun) domain protein [Sulfolobus islandicus HVE10/4]
Length = 339
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 125/299 (41%), Gaps = 77/299 (25%)
Query: 26 AYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGR 85
YG ++ + A+ +P+ +RVNTLKT+ + +++KL + EA
Sbjct: 4 VYG-EYLNDFLDAIRKPNPRLYVRVNTLKTSVESILEKLPHFKLDEDFKEA--------- 53
Query: 86 LQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVP 145
++ + GP+ I+ +VIV +K AE+V+ GA VY P
Sbjct: 54 -----------------IYTEIKGPNEINIR------QNKVIVDKKTAESVMLGANVYKP 90
Query: 146 GVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQG 205
G+ + K +V V E P +G + G+ TD
Sbjct: 91 GLKRVVINDPKDKMVTVYSDHEIPVAEGKY----------YGTNTD-------------- 126
Query: 206 TAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLE---GEIFLQNLPSIVTAHALDPQKG 262
+ V++ N ++ P D+ E G I++Q S+ AH LDPQ
Sbjct: 127 ---------------LIVEVTNSLYTSPKLADLSELKNGLIYVQGKASMYVAHLLDPQPN 171
Query: 263 ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
E+I+DM A GGK T I L +++ D + KV ++ L +MG++ I YK D+
Sbjct: 172 EKIVDMTAYAGGKLTHIYQ-LEPRVKLIGFDHTEKKVEKLRDLVNKMGMR-IEIYKADS 228
>gi|297526090|ref|YP_003668114.1| Fmu (Sun) domain-containing protein [Staphylothermus hellenicus DSM
12710]
gi|297255006|gb|ADI31215.1| Fmu (Sun) domain protein [Staphylothermus hellenicus DSM 12710]
Length = 383
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 123/278 (44%), Gaps = 59/278 (21%)
Query: 25 RAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKG 84
R YG+ +S + K L P +RVNT+ T D++++
Sbjct: 14 RVYGSLTYSLLDKILLPPKRL-YLRVNTMLITRDELVE---------------------- 50
Query: 85 RLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYV 144
L+ I+ + P +E VF++ GP+ I Y+ K+++V + AE+++ GA +Y
Sbjct: 51 LLKKRGINVKKDPYVEEAVFIELEGPNKIPV-YD-----KKIVVDKYAAESIMIGANLYR 104
Query: 145 PGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQ 204
PG++ E + V V G + + R V +D + R G+ +G+
Sbjct: 105 PGILRFDRFKE-NEYVNVQAT-------NGKIISVVRTLV----SSDKLKYIRKGI-VGE 151
Query: 205 GTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGER 264
+ +A R E YD+ G + Q+LP++ + LDPQ GE
Sbjct: 152 NIVSIYKAPPIRDLEE---------------YDL--GLFYPQSLPAMTVSRILDPQPGEL 194
Query: 265 ILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDI 302
I DM AAPGGKT+ + L R VVA +R+ K + +
Sbjct: 195 IFDMNAAPGGKTSHLIQLSRGRSRVVAFERNVKKALKV 232
>gi|157692254|ref|YP_001486716.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus pumilus
SAFR-032]
gi|157681012|gb|ABV62156.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus pumilus
SAFR-032]
Length = 447
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 225 MHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLR 284
M I PSF EG + +Q+ S++ A ALDPQ GE +LD CAAPGGK+T IA +
Sbjct: 218 MKGSIVSTPSFQ---EGYVTIQDESSMLVARALDPQPGETVLDACAAPGGKSTHIAERMN 274
Query: 285 DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324
DEG++V++D +KV I++ A + L I LDA KA
Sbjct: 275 DEGQIVSLDLHEHKVKLIKQAAKRLNLTQIEAKALDARKA 314
>gi|431794643|ref|YP_007221548.1| ribosomal RNA small subunit methyltransferase RsmB
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430784869|gb|AGA70152.1| ribosomal RNA small subunit methyltransferase RsmB
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 453
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Query: 216 RASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGK 275
R E + ++ I +LPSF EG +Q+ S + AH L+PQ+G+R+LD+CAAPGGK
Sbjct: 211 RVPESLLIEDFGSIERLPSFQ---EGLFTVQDESSQLIAHVLNPQRGQRVLDVCAAPGGK 267
Query: 276 TTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
TT +A + +EGE+ A D +KV I++LA +G+ I DA
Sbjct: 268 TTHLAQRMENEGEIQAFDLHPHKVKIIEELAQRLGITIIHAQAGDA 313
>gi|148241673|ref|YP_001226830.1| ribosomal RNA small subunit methyltransferase B [Synechococcus sp.
RCC307]
gi|147849983|emb|CAK27477.1| Ribosomal RNA small subunit methyltransferase B [Synechococcus sp.
RCC307]
Length = 454
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 62/109 (56%)
Query: 225 MHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLR 284
+ +R LP EG+ +Q+ + A LDP+ G+R+LD CAAPGGKTT IA L+
Sbjct: 239 LTSRPGPLPQLAGFSEGQWCVQDRAAQRIAPLLDPKPGQRVLDACAAPGGKTTHIAELMG 298
Query: 285 DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
D+GEVVAVD + ++ + A +GL CI T DA + ES D
Sbjct: 299 DQGEVVAVDVAPRRLQQVSANAERLGLSCIRTEAADATDLTDWEAESFD 347
>gi|229579627|ref|YP_002838026.1| Fmu (Sun) domain-containing protein [Sulfolobus islandicus
Y.G.57.14]
gi|228010342|gb|ACP46104.1| Fmu (Sun) domain protein [Sulfolobus islandicus Y.G.57.14]
Length = 339
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 125/299 (41%), Gaps = 77/299 (25%)
Query: 26 AYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGR 85
YG ++ + A+ +P+ +RVNTLKT+ + +++KL + EA
Sbjct: 4 VYG-EYLNDFLDAIRKPNPRLYVRVNTLKTSVESILEKLPHFKLDEDFKEA--------- 53
Query: 86 LQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVP 145
++ + GP+ I+ +VIV +K AE+V+ GA VY P
Sbjct: 54 -----------------IYTEIKGPNEINIR------QNKVIVDKKTAESVMLGANVYKP 90
Query: 146 GVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQG 205
G+ + K +V V E P +G + G+ TD
Sbjct: 91 GLKRVVINDPKDKMVTVYSDHEIPVAEGKY----------YGTNTD-------------- 126
Query: 206 TAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLE---GEIFLQNLPSIVTAHALDPQKG 262
+ V++ N ++ P D+ E G I++Q S+ AH LDPQ
Sbjct: 127 ---------------LIVEVTNSLYTSPKLADLSELKNGLIYVQGKASMYVAHLLDPQPN 171
Query: 263 ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
E+I+DM A GGK + I L +++ D + KV ++ L +MG++ I YK D+
Sbjct: 172 EKIVDMTAYAGGKLSHIYQ-LEPRVKLIGFDHTEKKVEKLRDLVNKMGMR-IEIYKADS 228
>gi|227827996|ref|YP_002829776.1| Fmu (Sun) domain-containing protein [Sulfolobus islandicus M.14.25]
gi|229585265|ref|YP_002843767.1| Fmu (Sun) domain-containing protein [Sulfolobus islandicus M.16.27]
gi|238620224|ref|YP_002915050.1| Fmu (Sun) domain-containing protein [Sulfolobus islandicus M.16.4]
gi|227459792|gb|ACP38478.1| Fmu (Sun) domain protein [Sulfolobus islandicus M.14.25]
gi|228020315|gb|ACP55722.1| Fmu (Sun) domain protein [Sulfolobus islandicus M.16.27]
gi|238381294|gb|ACR42382.1| Fmu (Sun) domain protein [Sulfolobus islandicus M.16.4]
Length = 339
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 124/299 (41%), Gaps = 77/299 (25%)
Query: 26 AYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGR 85
YG ++ + A+ +P+ +RVNTLKT+ + +++ L + EA
Sbjct: 4 VYG-EYLNDFLDAIRKPNPRLYVRVNTLKTSVESILENLPHFKLDEDFKEA--------- 53
Query: 86 LQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVP 145
++ + GP+ I+ +VIV +K AE+V+ GA VY P
Sbjct: 54 -----------------IYTEIKGPNEINIR------QNKVIVDKKTAESVMLGANVYKP 90
Query: 146 GVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQG 205
G+ + K +V V E P +G + G+ TD
Sbjct: 91 GLKRVVINDPKDKMVTVYSDREIPVAEGKY----------YGTNTD-------------- 126
Query: 206 TAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLE---GEIFLQNLPSIVTAHALDPQKG 262
+ V++ N ++ P D+ E G I++Q S+ AH LDPQ
Sbjct: 127 ---------------LIVEVTNSLYTSPKLADLSELKNGLIYVQGKASMYVAHLLDPQPN 171
Query: 263 ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
E+I+DM A GGK T I L +++ D + KV ++ L +MG++ I YK D+
Sbjct: 172 EKIVDMTAYAGGKLTHIYQ-LEPRVKLIGFDHTEKKVEKLRDLVNKMGMR-IEIYKADS 228
>gi|332796948|ref|YP_004458448.1| Fmu (Sun) domain-containing protein [Acidianus hospitalis W1]
gi|332694683|gb|AEE94150.1| Fmu (Sun) domain protein [Acidianus hospitalis W1]
Length = 348
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 129/302 (42%), Gaps = 77/302 (25%)
Query: 13 LRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSG 72
L ++ V E + YG S + ++ RP+ +RVNTLKTT D+V+Q
Sbjct: 3 LDYDEFVIEELRKVYGKSLNSFLD-SIKRPNSRLYVRVNTLKTTVDEVLQ---------- 51
Query: 73 SSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKC 132
S+KG ++ E+ ++ + GP+ ++ +VIV +K
Sbjct: 52 --------SMKGFKKDEDFPEA--------IYAEVKGPNKLE------SLDSKVIVDKKT 89
Query: 133 AEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDP 192
AE+V+ GA VY PG+ ++ E V VS
Sbjct: 90 AESVMLGADVYPPGIKKIIAN-EGNSVEVVS----------------------------- 119
Query: 193 YYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYD---VLEGEIFLQNLP 249
+G+ + G + G F V +++ ++ P D + EG+I++Q
Sbjct: 120 ----ENGITVANGELVRLPGGKF------MVKVYSSLYSSPKLADTKEIKEGKIYVQGKA 169
Query: 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM 309
S+ A +DPQ GE I+DM AAPGGK + I L ++ D ++ KV +++L +M
Sbjct: 170 SMYVARIIDPQPGEFIVDMTAAPGGKLSHIYQ-LEPRARIIGFDHTYKKVEKMKQLFKKM 228
Query: 310 GL 311
+
Sbjct: 229 NV 230
>gi|255657701|ref|ZP_05403110.1| ribosomal RNA small subunit methyltransferase B [Mitsuokella
multacida DSM 20544]
gi|260849889|gb|EEX69896.1| ribosomal RNA small subunit methyltransferase B [Mitsuokella
multacida DSM 20544]
Length = 452
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
A EGI V H L + + EG +Q+ S++ AH + PQ GE I+D CAAPGGKT
Sbjct: 212 APEGILVRHHG---ALDALAPLQEGRCQVQDESSMLVAHVVGPQPGEFIIDCCAAPGGKT 268
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
T +A+L+ DEG ++A D +K+ I++ AA +G++ I T ++DA
Sbjct: 269 THMAALMHDEGRILAGDIYSHKLQRIEENAARLGIQSIETEEIDA 313
>gi|163119428|ref|YP_078968.2| rRNA SAM-dependent methyltransferase RmsB [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|404489065|ref|YP_006713171.1| 16S rRNA methyltransferase B [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423682119|ref|ZP_17656958.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus licheniformis
WX-02]
gi|52348056|gb|AAU40690.1| rRNA large subunit methyltransferase B [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|145902935|gb|AAU23330.2| rRNA SAM-dependent methyltransferase RmsB [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|383438893|gb|EID46668.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus licheniformis
WX-02]
Length = 448
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 57/85 (67%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EGE+ +Q+ S++ A AL P++GE +LD CAAPGGK+T I LL D G+VV++D +KV
Sbjct: 229 EGEVTIQDESSMLVARALGPERGETVLDACAAPGGKSTHIGELLEDTGKVVSLDLHQHKV 288
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I LDA KA
Sbjct: 289 KLIKEAAGRIGLSNIEARALDARKA 313
>gi|253702184|ref|YP_003023373.1| sun protein [Geobacter sp. M21]
gi|251777034|gb|ACT19615.1| sun protein [Geobacter sp. M21]
Length = 448
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
+ +GI ++ +I +LPSF D G +Q+ S + L P KGER+LD CAAPGGKT
Sbjct: 213 SPDGIRLNQSGQITRLPSFRD---GLFTVQDESSQLAPLFLAPGKGERVLDACAAPGGKT 269
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
T IA L++D GE+ A D ++ K+ I++ +G+ + T+ +DA
Sbjct: 270 TQIAQLMQDSGEIYACDVNNKKLRLIKETCDRLGINSVRTFTMDA 314
>gi|197119890|ref|YP_002140317.1| 16S rRNA (5-methyl-C967)-methyltransferase [Geobacter bemidjiensis
Bem]
gi|197089250|gb|ACH40521.1| 16S rRNA (5-methyl-C967)-methyltransferase [Geobacter bemidjiensis
Bem]
Length = 448
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
+ +GI ++ +I +LPSF D G +Q+ S + L P KGER+LD CAAPGGKT
Sbjct: 213 SPDGIRLNQSGQITRLPSFRD---GLFTVQDESSQLAPLFLAPGKGERVLDACAAPGGKT 269
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
T IA L++D GE+ A D ++ K+ I++ +G+ + T+ +DA
Sbjct: 270 TQIAQLMQDSGEIYACDVNNKKLRLIKETCDRLGINSVRTFTMDA 314
>gi|319646043|ref|ZP_08000273.1| YloM protein [Bacillus sp. BT1B_CT2]
gi|317391793|gb|EFV72590.1| YloM protein [Bacillus sp. BT1B_CT2]
Length = 444
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 57/85 (67%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EGE+ +Q+ S++ A AL P++GE +LD CAAPGGK+T I LL D G+VV++D +KV
Sbjct: 225 EGEVTIQDESSMLVARALGPERGETVLDACAAPGGKSTHIGELLEDTGKVVSLDLHQHKV 284
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I LDA KA
Sbjct: 285 KLIKEAAGRIGLSNIEARALDARKA 309
>gi|338813384|ref|ZP_08625513.1| 16S rRNA methyltransferase B [Acetonema longum DSM 6540]
gi|337274743|gb|EGO63251.1| 16S rRNA methyltransferase B [Acetonema longum DSM 6540]
Length = 450
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
EG+ H + +PS EG +Q+ S++ AH L PQ GE I+D C APGGK+T
Sbjct: 213 EGLVCTEHPALASMPSLQ---EGLFQVQDESSMLVAHVLGPQPGEFIIDACGAPGGKSTH 269
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
IA+L+ + G+V+A D +K+ I++ A +G+ C+ T ++DA+K
Sbjct: 270 IAALMNNSGKVLATDLYEHKLALIRENAKRLGIHCLETRQMDAVK 314
>gi|194014930|ref|ZP_03053547.1| ribosomal RNA small subunit methyltransferase B [Bacillus pumilus
ATCC 7061]
gi|194013956|gb|EDW23521.1| ribosomal RNA small subunit methyltransferase B [Bacillus pumilus
ATCC 7061]
Length = 442
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 225 MHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLR 284
M I PSF EG + +Q+ S++ A ALDPQ GE +LD CAAPGGK+T IA +
Sbjct: 213 MKGSIVSTPSFQ---EGYVTIQDESSMLVARALDPQPGEAVLDACAAPGGKSTHIAERMN 269
Query: 285 DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324
D+G++V++D +KV I++ A + L I LDA KA
Sbjct: 270 DKGQIVSLDLHEHKVKLIKQAAKRLNLTQIEAKALDARKA 309
>gi|384433825|ref|YP_005643183.1| Fmu (Sun) domain-containing protein [Sulfolobus solfataricus 98/2]
gi|261601979|gb|ACX91582.1| Fmu (Sun) domain protein [Sulfolobus solfataricus 98/2]
Length = 350
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 126/301 (41%), Gaps = 76/301 (25%)
Query: 24 IRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVK 83
+R ++ + A+ +P+ IRVNTLKT+ + ++++L + EA
Sbjct: 12 LREVYGEYLNDFLNAIRKPNPRLYIRVNTLKTSVEKILERLPHFKPDEDFKEA------- 64
Query: 84 GRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVY 143
++V+ GP+ I+ +VIV +K AE+ + GA VY
Sbjct: 65 -------------------IYVEIKGPNEINIH------ENKVIVDKKTAESAMLGANVY 99
Query: 144 VPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIG 203
PG+ + VV + ++ T+ G+ + G Y G
Sbjct: 100 KPGLKS---------VVINNAKDKRVTVYSDNGIPVAEGK-----------------YYG 133
Query: 204 QGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLE---GEIFLQNLPSIVTAHALDPQ 260
T + V++ N ++ P D+ E G I++Q S+ AH LDP
Sbjct: 134 MNT-------------NLVVEVTNSLYTSPKLADLPELKNGLIYVQGKASMYVAHLLDPH 180
Query: 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
E+I+DM A GGK T I L +++ D + KV ++ LA +MG++ I YK D
Sbjct: 181 PNEKIVDMTAYAGGKLTHIYQ-LEPRVKLIGFDHTEKKVEKLRDLANKMGMR-IEIYKAD 238
Query: 321 A 321
+
Sbjct: 239 S 239
>gi|323141164|ref|ZP_08076065.1| ribosomal RNA small subunit methyltransferase B
[Phascolarctobacterium succinatutens YIT 12067]
gi|322414307|gb|EFY05125.1| ribosomal RNA small subunit methyltransferase B
[Phascolarctobacterium succinatutens YIT 12067]
Length = 453
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
Query: 231 QLPSFYDVLEG---EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEG 287
LPS + +L ++Q+ S++ A L PQ G R+LDMC+APGGK T +A L++D+G
Sbjct: 231 HLPSLHTLLAALPQHFYIQDESSMLVAPVLAPQPGMRVLDMCSAPGGKATHVAQLMQDKG 290
Query: 288 EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
EV+A D +K+ I + AA +G+K + T + DAL+
Sbjct: 291 EVIACDIHEHKLELIAENAARLGMKSVKTLQNDALQ 326
>gi|296242733|ref|YP_003650220.1| Fmu (Sun) domain-containing protein [Thermosphaera aggregans DSM
11486]
gi|296095317|gb|ADG91268.1| Fmu (Sun) domain protein [Thermosphaera aggregans DSM 11486]
Length = 382
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 127/290 (43%), Gaps = 64/290 (22%)
Query: 25 RAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKG 84
R YG+ R+ ++L P IRVNTL+TT E V+
Sbjct: 11 RVYGS-LTQRLVESLATPPRRLYIRVNTLRTTV-------------EEVLEEMEKEGVRA 56
Query: 85 RLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYV 144
R ++ + E+ V+V+ GP + P K IV K A +V+ G+ +Y
Sbjct: 57 R-KDEEVDEA--------VYVELEGPFKL-----PGDIDKAFIVDEKTAASVMMGSNLYR 102
Query: 145 PGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQ 204
PGV+ S + +G++V V + G Y+G
Sbjct: 103 PGVLKADS-IRRGELVKV--------------------------------VSKHGFYVGV 129
Query: 205 GTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV---LEGEIFLQNLPSIVTAHALDPQK 261
A MS + +FR ++G+ +++ P ++ +G I+ Q LP++VT L+P++
Sbjct: 130 VEAAMSSSELFRVNKGLIGVNITSVYRAPKINELSVYRKGLIYPQGLPAMVTTLFLNPRE 189
Query: 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311
G+ + D+ A+PGGKT + + + ++A DR+ K+ ++ ++GL
Sbjct: 190 GDLVADLNASPGGKTGHVVQYTKGKSRIIAFDRNTPKIEVLKTNLEKLGL 239
>gi|297530652|ref|YP_003671927.1| sun protein [Geobacillus sp. C56-T3]
gi|297253904|gb|ADI27350.1| sun protein [Geobacillus sp. C56-T3]
Length = 444
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 55/83 (66%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ A ALDP GER+LD CAAPGGKTT IA + GEVVAVD +KVM
Sbjct: 228 GWLTIQDESSMLVARALDPAPGERVLDCCAAPGGKTTHIAERMDGRGEVVAVDIHEHKVM 287
Query: 301 DIQKLAAEMGLKCITTYKLDALK 323
I++ A +GL + T LD+ +
Sbjct: 288 LIEQQAKRLGLDNVATLALDSRR 310
>gi|261419371|ref|YP_003253053.1| sun protein [Geobacillus sp. Y412MC61]
gi|319766186|ref|YP_004131687.1| sun protein [Geobacillus sp. Y412MC52]
gi|261375828|gb|ACX78571.1| sun protein [Geobacillus sp. Y412MC61]
gi|317111052|gb|ADU93544.1| sun protein [Geobacillus sp. Y412MC52]
Length = 444
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 55/83 (66%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ A ALDP GER+LD CAAPGGKTT IA + GEVVAVD +KVM
Sbjct: 228 GWLTIQDESSMLVARALDPAPGERVLDCCAAPGGKTTHIAERMDGRGEVVAVDIHEHKVM 287
Query: 301 DIQKLAAEMGLKCITTYKLDALK 323
I++ A +GL + T LD+ +
Sbjct: 288 LIEQQAKRLGLDNVATLSLDSRR 310
>gi|322418095|ref|YP_004197318.1| sun protein [Geobacter sp. M18]
gi|320124482|gb|ADW12042.1| sun protein [Geobacter sp. M18]
Length = 479
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
+GI ++ +I +LPSF D G +Q+ S + L P+KG+R+LD C+APGGKTT
Sbjct: 245 DGIRLNQSGQITRLPSFRD---GLFTVQDESSQLAPLFLSPEKGDRVLDACSAPGGKTTQ 301
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
IA L+ + GE+ A D +H K+ I++ +G+ + T+ +DA
Sbjct: 302 IAQLMGNSGEIYACDVNHKKLRLIKETCDRLGITSVRTFTMDA 344
>gi|119872179|ref|YP_930186.1| PUA domain-containing protein [Pyrobaculum islandicum DSM 4184]
gi|119673587|gb|ABL87843.1| PUA domain containing protein [Pyrobaculum islandicum DSM 4184]
Length = 376
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 126/295 (42%), Gaps = 69/295 (23%)
Query: 21 EYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVAS 80
++F+ + + ++T+P IRVNT K + D++++L NS +A
Sbjct: 14 KHFLEYLSDNEIDALFHSVTKPPSRYYIRVNTTKISRRDLMKRL-----NSRGVQAYPDE 68
Query: 81 SVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGA 140
L ++ GP I K+VIV +K AE+V+ GA
Sbjct: 69 HFDDAL-----------------WLPVEGPFDIPTAR------KQVIVDKKAAESVMLGA 105
Query: 141 QVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGL 200
+Y PG++ + HV++GD V + +G+
Sbjct: 106 DLYAPGIVK-TDHVKEGDEVNI--------------------------------VSDNGV 132
Query: 201 YIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV---LEGEIFLQNLPSIVTAHAL 257
+ GTA++ I + G+ + + +++ P D+ EG ++ Q+LP+I H
Sbjct: 133 VVAFGTAVVDSDEILKTRRGLYIKVEKSLYKAPKIRDLPEYKEGLLYSQSLPAIAVGHVA 192
Query: 258 DPQKGERILDMCAAPGGKTTAIASL-LRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311
+ +D+ AAPGGK T +A + LR ++AVDRS K+ +++ +GL
Sbjct: 193 KRARASTAVDLNAAPGGKATHLAQIGLR----IIAVDRSWPKIEKLKEEVKRLGL 243
>gi|118581643|ref|YP_902893.1| sun protein [Pelobacter propionicus DSM 2379]
gi|118504353|gb|ABL00836.1| sun protein [Pelobacter propionicus DSM 2379]
Length = 452
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
+ GI V+ ++I LP F+ EG +Q+ S + LDP+ GERILD CAAPGGK
Sbjct: 218 SPHGILVEGRHQITSLPGFH---EGLFAVQDEASQMAGLLLDPRPGERILDACAAPGGKA 274
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDE 334
T +A L+ D GE++A+D S K+ IQ+ A +G+ I T + D L + +S D
Sbjct: 275 THLAQLMNDRGELLAMDVSGVKLPLIQESAHRLGISIIRTRRADLLNSAAFPVDSFDR 332
>gi|81299771|ref|YP_399979.1| sun protein [Synechococcus elongatus PCC 7942]
gi|81168652|gb|ABB56992.1| sun protein [Synechococcus elongatus PCC 7942]
Length = 451
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 223 VDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASL 282
+D I QLP F EG +Q+ + + AH +DPQ GE +LD+CAAPGGK+T +A L
Sbjct: 223 IDPPGPIRQLPGFD---EGWWMVQDSSAQLIAHLVDPQPGETVLDVCAAPGGKSTHLAEL 279
Query: 283 LRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA--LKAVRRKNESNDEP----- 335
+ D G+V+A D S ++ +Q+ A + L ITT +D +K ++ D P
Sbjct: 280 MGDRGQVIACDSSAKRLRKVQENAQRLQLSSITTRAIDGRQIKGIQADRILVDAPCSGLG 339
Query: 336 NMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTC--GECGMAQEEINA 393
+ D + Q+ DS+ E+ + +E L+ +C + T C + E A
Sbjct: 340 TLHRHADGRW--RQSPDSV---AELAQLQSEILDAAAACLKPAGTLVYATCTLHPAENEA 394
Query: 394 LV 395
++
Sbjct: 395 VI 396
>gi|126465627|ref|YP_001040736.1| Fmu (Sun) domain-containing protein [Staphylothermus marinus F1]
gi|126014450|gb|ABN69828.1| Fmu (Sun) domain protein [Staphylothermus marinus F1]
Length = 384
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 125/278 (44%), Gaps = 59/278 (21%)
Query: 25 RAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKG 84
+ YG+ +S + K L P +RVNT+ T +++++
Sbjct: 15 KVYGSLTYSLLDKILLPPKRL-YLRVNTMLITREELVE---------------------- 51
Query: 85 RLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYV 144
RL+ I+ + P +E VF++ GP+ I Y+ K++IV + AE+++ GA +Y
Sbjct: 52 RLKKRGINVKEDPYVEEAVFIELEGPNKIPV-YD-----KKIIVDKYAAESIMIGANLYR 105
Query: 145 PGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQ 204
PG++ E + V + G + + R V +D + + G+ +G+
Sbjct: 106 PGIVRFDRFKE-NEYVNIQAT-------NGRIIAVVRTLV----SSDKLKYMKKGI-VGE 152
Query: 205 GTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGER 264
+ +A R E YD+ G + Q+LP+++ + LDPQ GE
Sbjct: 153 NIVSIYKAPPIRDLEE---------------YDL--GLFYPQSLPAMMVSRILDPQPGEL 195
Query: 265 ILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDI 302
I DM AAPGGKT+ + L + ++A +R+ K + +
Sbjct: 196 IFDMNAAPGGKTSHLVQLSQGRSRIIAFERNVKKALKV 233
>gi|56419708|ref|YP_147026.1| RNA-binding Sun protein [Geobacillus kaustophilus HTA426]
gi|375008141|ref|YP_004981774.1| hypothetical protein [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56379550|dbj|BAD75458.1| RNA-binding Sun protein [Geobacillus kaustophilus HTA426]
gi|359286990|gb|AEV18674.1| hypothetical protein GTCCBUS3UF5_13610 [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 444
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 54/83 (65%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ A ALDP GER+LD CAAPGGKTT IA + GEVVAVD KVM
Sbjct: 228 GWLTIQDESSMLVARALDPAPGERVLDCCAAPGGKTTHIAERMDGRGEVVAVDIHERKVM 287
Query: 301 DIQKLAAEMGLKCITTYKLDALK 323
I++ A +GL + T LD+ +
Sbjct: 288 MIEQQAKRLGLDNVATLALDSRR 310
>gi|448237330|ref|YP_007401388.1| ribosomal RNA small subunit methyltransferase B [Geobacillus sp.
GHH01]
gi|445206172|gb|AGE21637.1| ribosomal RNA small subunit methyltransferase B [Geobacillus sp.
GHH01]
Length = 444
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 55/83 (66%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ A ALDP GER+LD CAAPGGKTT IA + GEVVAVD +KVM
Sbjct: 228 GWLTIQDESSMLVARALDPAPGERVLDCCAAPGGKTTHIAERMGGRGEVVAVDIHEHKVM 287
Query: 301 DIQKLAAEMGLKCITTYKLDALK 323
I++ A +GL + T LD+ +
Sbjct: 288 LIEQQAKRLGLDNVATLALDSRR 310
>gi|89895438|ref|YP_518925.1| hypothetical protein DSY2692 [Desulfitobacterium hafniense Y51]
gi|89334886|dbj|BAE84481.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 453
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQG--TAMMSRAGIF-----RASEGIAVDMHN 227
+G+ T ++ P + + L I + A + G+ R E + ++
Sbjct: 163 YGMADTEALCQANNEPAPVWIRTNTLKISRADLQARLEEEGVKVTIGERVPESLMIEEFG 222
Query: 228 RIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEG 287
+ QLPSF EG +Q+ S + AH L+PQ G+++LD C APGGKTT +A + ++G
Sbjct: 223 SLDQLPSFQ---EGLFTVQDESSQLIAHVLNPQAGQKVLDACGAPGGKTTHLAQRMENQG 279
Query: 288 EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
E++A D +KV I+ LAA +G+ I DA
Sbjct: 280 EILAFDIHPHKVKLIEDLAARLGITIIRAQAGDA 313
>gi|193214990|ref|YP_001996189.1| sun protein [Chloroherpeton thalassium ATCC 35110]
gi|193088467|gb|ACF13742.1| sun protein [Chloroherpeton thalassium ATCC 35110]
Length = 443
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 227 NRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDE 286
+R F L F GE+ +Q+ + L+PQ G+++LDMCAAPGGK+T +A ++ +
Sbjct: 218 DRFFDLEPFLST--GEVSVQSEAQALACRLLNPQPGQKVLDMCAAPGGKSTYLAEMMANA 275
Query: 287 GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
G++ ++D NK+ DI +LA+ +G+ I+T K DA +
Sbjct: 276 GQITSLDLYDNKLEDIDRLASALGIDIISTIKHDATR 312
>gi|389573303|ref|ZP_10163378.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus sp. M 2-6]
gi|388427000|gb|EIL84810.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus sp. M 2-6]
Length = 442
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 225 MHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLR 284
M I P F EG + +Q+ S++ A ALDPQ GE +LD CAAPGGK+T IA +
Sbjct: 213 MKGSIVSTPFFQ---EGFVTIQDESSMLVARALDPQPGEMVLDACAAPGGKSTHIAERMN 269
Query: 285 DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324
DEG++V++D +KV I++ A + L I LDA KA
Sbjct: 270 DEGKIVSLDLHEHKVKLIKQAAKRLNLTHIEAKALDARKA 309
>gi|56750589|ref|YP_171290.1| sun protein [Synechococcus elongatus PCC 6301]
gi|56685548|dbj|BAD78770.1| sun protein [Synechococcus elongatus PCC 6301]
Length = 405
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 223 VDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASL 282
+D I QLP F EG +Q+ + + AH +DPQ GE +LD+CAAPGGK+T +A L
Sbjct: 177 IDPPGPIRQLPGFD---EGWWMVQDSSAQLIAHLVDPQPGETVLDVCAAPGGKSTHLAEL 233
Query: 283 LRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
+ D G+V+A D S ++ +Q+ A + L ITT +D
Sbjct: 234 MGDRGQVIACDSSAKRLRKVQENAQRLQLSSITTRAID 271
>gi|399924362|ref|ZP_10781720.1| 16S rRNA methyltransferase B [Peptoniphilus rhinitidis 1-13]
Length = 432
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 57/81 (70%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GE ++Q+L SI+ + L+P K ++LD+CAAPGGK+T +A ++ + GE+VA D+S K+
Sbjct: 228 GEFYVQDLGSILVSTFLNPSKDSKVLDLCAAPGGKSTHLAEIMENTGEIVACDKSKKKIK 287
Query: 301 DIQKLAAEMGLKCITTYKLDA 321
I++ A +G+K I T+ DA
Sbjct: 288 LIEENARRLGVKNIKTFVNDA 308
>gi|218884374|ref|YP_002428756.1| RNA (Cytosine-C(5)-)-methyltransferase [Desulfurococcus
kamchatkensis 1221n]
gi|218765990|gb|ACL11389.1| RNA (Cytosine-C(5)-)-methyltransferase [Desulfurococcus
kamchatkensis 1221n]
Length = 386
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 128/302 (42%), Gaps = 66/302 (21%)
Query: 13 LRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSG 72
+ W +V ++ YG+ + K L P +RVNT+KTT +L+ +++ G
Sbjct: 1 MSW--RVRSLLVKPYGSIVDVLVEK-LKTPPMRMYLRVNTVKTTP----HRLVELLRERG 53
Query: 73 SSEADVASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKC 132
EA + + E V+ GP ++ + K ++V K
Sbjct: 54 V-EAYMDEYI-----------------EEAVYTVVQGPFPLECNTD-----KYIVVDDKT 90
Query: 133 AEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDP 192
A +++ GA +Y PGV+ S E ++AV+
Sbjct: 91 ASSLILGANLYRPGVVKSSVFSEGDKLLAVT----------------------------- 121
Query: 193 YYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV---LEGEIFLQNLP 249
R G + A+ S + + +G+ + F+ P ++ +G ++ Q P
Sbjct: 122 ----RQGTPLACLEAVTSSKSLHKMRQGLVARSTSSPFKAPRISELDIYKQGLLYPQGYP 177
Query: 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM 309
SIVT LDP+ GE I+DM A+PGGKT+ I L + ++A+DRS K+ +++ + +
Sbjct: 178 SIVTTRVLDPRPGELIVDMNASPGGKTSHIVQLTKGGARIIAIDRSPGKIAELKNNLSNL 237
Query: 310 GL 311
L
Sbjct: 238 DL 239
>gi|15897306|ref|NP_341911.1| Sun protein [Sulfolobus solfataricus P2]
gi|284174558|ref|ZP_06388527.1| Sun (fmu) protein (sun-1) [Sulfolobus solfataricus 98/2]
gi|13813517|gb|AAK40701.1| Sun (fmu) protein (sun-1) [Sulfolobus solfataricus P2]
Length = 327
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 76/287 (26%)
Query: 38 ALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIP 97
A+ +P+ IRVNTLKT+ + ++++L + EA
Sbjct: 3 AIRKPNPRLYIRVNTLKTSVEKILERLPHFKPDEDFKEA--------------------- 41
Query: 98 GLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKG 157
++V+ GP+ I+ +VIV +K AE+ + GA VY PG+ +
Sbjct: 42 -----IYVEIKGPNEINIH------ENKVIVDKKTAESAMLGANVYKPGLKS-------- 82
Query: 158 DVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRA 217
VV + ++ T+ G+ + G Y G T
Sbjct: 83 -VVINNAKDKRVTVYSDNGIPVAEGK-----------------YYGMNT----------- 113
Query: 218 SEGIAVDMHNRIFQLPSFYDVLE---GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGG 274
+ V++ N ++ P D+ E G I++Q S+ AH LDP E+I+DM A GG
Sbjct: 114 --NLVVEVTNSLYTSPKLADLPELKNGLIYVQGKASMYVAHLLDPHPNEKIVDMTAYAGG 171
Query: 275 KTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
K T I L +++ D + KV ++ LA +MG++ I YK D+
Sbjct: 172 KLTHIYQ-LEPRVKLIGFDHTEKKVEKLRDLANKMGMR-IEIYKADS 216
>gi|443323050|ref|ZP_21052061.1| ribosomal RNA small subunit methyltransferase RsmB [Gloeocapsa sp.
PCC 73106]
gi|442787231|gb|ELR96953.1| ribosomal RNA small subunit methyltransferase RsmB [Gloeocapsa sp.
PCC 73106]
Length = 451
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I QLP YD +G +Q+ + + H LDPQ GE+I+D CAAPGGKTT IA L+ D GE
Sbjct: 227 IQQLPG-YD--QGWWVVQDSSAQLVTHLLDPQPGEKIIDACAAPGGKTTHIAELMGDVGE 283
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
V A+DRS ++ +Q+ + L I+ + LD+
Sbjct: 284 VWAIDRSFKRLKKVQENLDRLQLNSISLHHLDS 316
>gi|452974522|gb|EME74342.1| 16S rRNA methyltransferase B [Bacillus sonorensis L12]
Length = 450
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 57/85 (67%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG++ +Q+ S++ A AL P+ GE +LD CAAPGGK+T I LL + G+VV++D +KV
Sbjct: 230 EGDVTIQDESSMLVARALGPKPGETVLDACAAPGGKSTHIGELLENTGKVVSLDLHRHKV 289
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
IQ+ A +GL I T +DA KA
Sbjct: 290 KLIQEAAGRLGLTNIDTRAMDARKA 314
>gi|219669868|ref|YP_002460303.1| sun protein [Desulfitobacterium hafniense DCB-2]
gi|423074032|ref|ZP_17062766.1| ribosomal RNA small subunit methyltransferase B [Desulfitobacterium
hafniense DP7]
gi|219540128|gb|ACL21867.1| sun protein [Desulfitobacterium hafniense DCB-2]
gi|361855126|gb|EHL07128.1| ribosomal RNA small subunit methyltransferase B [Desulfitobacterium
hafniense DP7]
Length = 453
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 216 RASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGK 275
R E + ++ + +LPSF EG +Q+ S + AH L+PQ G+++LD C APGGK
Sbjct: 211 RVPESLVIEDFGSLDKLPSFQ---EGHFTVQDESSQLIAHVLNPQAGQKVLDACGAPGGK 267
Query: 276 TTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
TT +A + ++GE++A D +KV I+ LAA +G+ I DA
Sbjct: 268 TTHLAQRMENQGEILAFDIHPHKVKLIEDLAARLGITIIRAQAGDA 313
>gi|70607231|ref|YP_256101.1| SUN family protein [Sulfolobus acidocaldarius DSM 639]
gi|449067473|ref|YP_007434555.1| SUN family protein [Sulfolobus acidocaldarius N8]
gi|449069745|ref|YP_007436826.1| SUN family protein [Sulfolobus acidocaldarius Ron12/I]
gi|68567879|gb|AAY80808.1| conserved Archaeal SUN family protein [Sulfolobus acidocaldarius
DSM 639]
gi|449035981|gb|AGE71407.1| SUN family protein [Sulfolobus acidocaldarius N8]
gi|449038253|gb|AGE73678.1| SUN family protein [Sulfolobus acidocaldarius Ron12/I]
Length = 349
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 126/298 (42%), Gaps = 74/298 (24%)
Query: 24 IRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVK 83
+R F+ + +L P+ IRVNTLKT+ + ++L + ++ SEA
Sbjct: 15 LRKVSGTKFNSLLDSLLVPNSRLYIRVNTLKTSPTRIRERLPFLHEDEDFSEA------- 67
Query: 84 GRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVY 143
++++ GP ++ + +VIV ++ AE+V+ GA VY
Sbjct: 68 -------------------LYIEIRGPSKLE------ERESKVIVDKRTAESVMMGANVY 102
Query: 144 VPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIG 203
PGV G+ V+V E G+ I G + +
Sbjct: 103 RPGVKRVI-----GNSRFVNVVSEN-------GIIIAEGEL-----------------VN 133
Query: 204 QGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGE 263
QG + I M++ + L ++ GEI LQ S+ A+ +DP+ GE
Sbjct: 134 QGNLAVK----------ITKSMYSS-YPLSDLDELKTGEILLQGKASMYVAYLIDPKPGE 182
Query: 264 RILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+I+DM A PGGK T I L + ++ D + KV D+++L +G+ I TY D+
Sbjct: 183 KIIDMTAHPGGKLTHIYQ-LEPKARILGFDHTKRKVQDLRQLTQRLGMH-IETYLADS 238
>gi|390938885|ref|YP_006402623.1| Fmu (Sun) domain-containing protein [Desulfurococcus fermentans DSM
16532]
gi|390191992|gb|AFL67048.1| Fmu (Sun) domain protein [Desulfurococcus fermentans DSM 16532]
Length = 382
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 64/292 (21%)
Query: 23 FIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSV 82
++ YG+ + + L P +RVNT+KTT +L+ +++ G EA +
Sbjct: 5 LVKPYGSI-VDILVEKLKTPPMRMYLRVNTVKTTP----HRLVELLRERGI-EAYI---- 54
Query: 83 KGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQV 142
+ I Y V V+G P D K ++V K A +++ GA +
Sbjct: 55 ----------DEYIEEAAYTV-VQGPFPLECDTD-------KYIVVDDKTASSLILGANL 96
Query: 143 YVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYI 202
Y PGV+ S E ++AV+ R G +
Sbjct: 97 YRPGVVKSSIFSEGDKLLAVT---------------------------------RQGTPL 123
Query: 203 GQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV---LEGEIFLQNLPSIVTAHALDP 259
A+ S + + G+ + F+ P ++ +G ++ Q PSIVT LDP
Sbjct: 124 ACLEAVTSSRSLHKMRRGLVARNTSSPFKAPRISELDIYKQGLLYPQGYPSIVTTRVLDP 183
Query: 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311
+ GE I+DM A+PGGKT+ I L + ++A+DRS K+ +++ + +GL
Sbjct: 184 RPGELIVDMNASPGGKTSHIVQLTKGGARIIAIDRSPGKITELKNTLSHLGL 235
>gi|404494920|ref|YP_006719026.1| 16S rRNA (5-methyl-C967)-methyltransferase [Geobacter
metallireducens GS-15]
gi|418067574|ref|ZP_12704913.1| sun protein [Geobacter metallireducens RCH3]
gi|78192548|gb|ABB30315.1| 16S rRNA (5-methyl-C967)-methyltransferase [Geobacter
metallireducens GS-15]
gi|373558572|gb|EHP84908.1| sun protein [Geobacter metallireducens RCH3]
Length = 446
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
A G+ + + LP F EG +Q+ S + A LDPQ GERILD+CAAPGGK
Sbjct: 213 APHGVRILSRTAVTTLPGFA---EGLFTVQDESSQLAAFFLDPQPGERILDVCAAPGGKA 269
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
T +A L+ + GEV+A D S K+ + + AA +G+ I T DA K
Sbjct: 270 TYLAQLMENRGEVLACDISAKKLRLVAEAAARLGIGIIRTMAGDATK 316
>gi|403383389|ref|ZP_10925446.1| ribosomal RNA small subunit methyltransferase B [Kurthia sp. JC30]
Length = 452
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 56/85 (65%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G I +Q+ S++ A+ALD Q G R+ DMCAAPGGKTT IA + +EGE++A D +K+
Sbjct: 237 DGIITIQDESSMLPAYALDVQPGMRVYDMCAAPGGKTTHIAEKMNNEGELIATDLHKHKI 296
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
IQ+ A +GL I T LD KA
Sbjct: 297 KLIQENADRLGLSIIKTSVLDGRKA 321
>gi|138894694|ref|YP_001125147.1| 16S rRNA m(5)C 967 methyltransferase [Geobacillus
thermodenitrificans NG80-2]
gi|196247686|ref|ZP_03146388.1| sun protein [Geobacillus sp. G11MC16]
gi|134266207|gb|ABO66402.1| 16S rRNA m(5)C 967 methyltransferase [Geobacillus
thermodenitrificans NG80-2]
gi|196212470|gb|EDY07227.1| sun protein [Geobacillus sp. G11MC16]
Length = 444
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 54/83 (65%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ A ALDP GER+LD CAAPGGKTT IA + GEVVAVD +KV
Sbjct: 228 GWLTIQDESSMLVARALDPAAGERVLDCCAAPGGKTTHIAERMDGRGEVVAVDIHEHKVK 287
Query: 301 DIQKLAAEMGLKCITTYKLDALK 323
I++ A +GL I T LD+ +
Sbjct: 288 LIEQQAQRLGLDNIRTLALDSRR 310
>gi|407977638|ref|ZP_11158475.1| 16S rRNA methyltransferase B [Bacillus sp. HYC-10]
gi|407415891|gb|EKF37472.1| 16S rRNA methyltransferase B [Bacillus sp. HYC-10]
Length = 447
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Query: 225 MHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLR 284
M I P F EG + +Q+ S++ A ALDPQ GE + D CAAPGGK+T IA +
Sbjct: 218 MKGSIVATPFFQ---EGFVTIQDESSMLVARALDPQPGEMVFDACAAPGGKSTHIAERMN 274
Query: 285 DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324
DEG++V++D +KV I++ A + L I LDA KA
Sbjct: 275 DEGKIVSLDLHEHKVKLIKQAAKRLNLTKIEAKALDARKA 314
>gi|124027597|ref|YP_001012917.1| ribosomal RNA small subunit methyltransferase B [Hyperthermus
butylicus DSM 5456]
gi|123978291|gb|ABM80572.1| ribosomal RNA small subunit methyltransferase B [Hyperthermus
butylicus DSM 5456]
Length = 405
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 34/199 (17%)
Query: 126 VIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVL 185
++V ++ AE+++ GA VY PGV+A V+V E G+ + +
Sbjct: 108 LVVDKRAAESIMLGANVYAPGVVALDEACANPGA-EVTVVSEN-------GVPVANAVLA 159
Query: 186 QGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVL---EGE 242
+ R + G+G +AV++ R +++PS D + G
Sbjct: 160 EDY--------RRAMEEGRGL--------------VAVNVRPR-YRVPSLRDTVWWRRGV 196
Query: 243 IFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDI 302
I+ Q+LPS+ + LDP+ G I+DMCAAPGGKT+ I L+R E ++AVD S K +
Sbjct: 197 IYEQSLPSMYASRILDPEPGAVIVDMCAAPGGKTSHIYELVRGEARIIAVDHSARKTERM 256
Query: 303 QKLAAEMGLKCITTYKLDA 321
+ +G I + D+
Sbjct: 257 RMELGRLGHTRIEVIRADS 275
>gi|347522574|ref|YP_004780144.1| NOL1/NOP2/sun family RNA methylase [Pyrolobus fumarii 1A]
gi|343459456|gb|AEM37892.1| RNA methylase, NOL1/NOP2/sun family [Pyrolobus fumarii 1A]
Length = 460
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+I +Q + + LDP+ GE ++DMCAAPGGKTT +A L++++G + A D ++
Sbjct: 245 EGKIIIQEEAAAAASIMLDPKPGETVVDMCAAPGGKTTHLAELMKNQGRIYAFDIDDARI 304
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
++ L MG+K +T YK DA KA
Sbjct: 305 KRMKMLLKRMGIKIVTIYKEDAGKA 329
>gi|189426656|ref|YP_001953833.1| sun protein [Geobacter lovleyi SZ]
gi|189422915|gb|ACD97313.1| sun protein [Geobacter lovleyi SZ]
Length = 464
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
A EGI + +I LP F EG +Q+ S + AH L PQ GE+ILDMCAAPGGK
Sbjct: 225 APEGIQLLQRCQITGLPGFD---EGLFMVQDEASQLVAHLLAPQTGEQILDMCAAPGGKA 281
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322
T +A L+ D G + A D + ++ I + A +GL I DAL
Sbjct: 282 THLAQLMNDRGCITATDLNARRIRRICESAQRLGLTSIQAVAADAL 327
>gi|317129258|ref|YP_004095540.1| sun protein [Bacillus cellulosilyticus DSM 2522]
gi|315474206|gb|ADU30809.1| sun protein [Bacillus cellulosilyticus DSM 2522]
Length = 449
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 58/83 (69%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
++G I +Q+ S++ AHAL P++ ER+LD CAAPGGK+T IA +++ G++V++D +K
Sbjct: 230 VDGWITVQDEGSMLVAHALSPKENERVLDACAAPGGKSTHIAEKMKNSGQIVSLDIHKHK 289
Query: 299 VMDIQKLAAEMGLKCITTYKLDA 321
V I+K A + L I T +LDA
Sbjct: 290 VGLIEKNAKRLNLSIINTEQLDA 312
>gi|67924848|ref|ZP_00518244.1| Fmu, rRNA SAM-dependent methyltransferase [Crocosphaera watsonii WH
8501]
gi|67853307|gb|EAM48670.1| Fmu, rRNA SAM-dependent methyltransferase [Crocosphaera watsonii WH
8501]
Length = 452
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 59/95 (62%)
Query: 222 AVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIAS 281
A+ + +I +P+ +G +Q+ + + ++ LDPQ GE I+D CAAPGGKTT IA
Sbjct: 222 ALRLKGKIGTIPTLPGFSQGHWTVQDTSAQLVSYFLDPQPGETIIDACAAPGGKTTHIAE 281
Query: 282 LLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
L+ D+G + A DR+ +++ +Q+ A + L CI T
Sbjct: 282 LMGDQGTIFACDRTPSRLKKVQENAQRLELNCIET 316
>gi|416406060|ref|ZP_11688032.1| Ribosomal RNA small subunit methyltransferase B [Crocosphaera
watsonii WH 0003]
gi|357261147|gb|EHJ10449.1| Ribosomal RNA small subunit methyltransferase B [Crocosphaera
watsonii WH 0003]
Length = 452
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 59/95 (62%)
Query: 222 AVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIAS 281
A+ + +I +P+ +G +Q+ + + ++ LDPQ GE I+D CAAPGGKTT IA
Sbjct: 222 ALRLKGKIGTIPTLPGFSQGHWTVQDTSAQLVSYFLDPQPGETIIDACAAPGGKTTHIAE 281
Query: 282 LLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
L+ D+G + A DR+ +++ +Q+ A + L CI T
Sbjct: 282 LMGDQGTIFACDRTPSRLKKVQENAQRLELNCIET 316
>gi|308173537|ref|YP_003920242.1| RNA-binding protein [Bacillus amyloliquefaciens DSM 7]
gi|384159442|ref|YP_005541515.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens TA208]
gi|384164123|ref|YP_005545502.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus
amyloliquefaciens LL3]
gi|384168489|ref|YP_005549867.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens XH7]
gi|307606401|emb|CBI42772.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus
amyloliquefaciens DSM 7]
gi|328553530|gb|AEB24022.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens TA208]
gi|328911678|gb|AEB63274.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus
amyloliquefaciens LL3]
gi|341827768|gb|AEK89019.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens XH7]
Length = 447
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 56/84 (66%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G++ +Q+ S++ A ALDP+ GE +LD CAAPGGK+ IA L+++EG + ++D +KV
Sbjct: 231 GQVSIQDESSMLVARALDPKPGETVLDACAAPGGKSAHIAELMKNEGSLTSLDLHRHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
IQ+ A +GL I +DA KA
Sbjct: 291 LIQEGAERLGLTIIDAQTMDARKA 314
>gi|194333562|ref|YP_002015422.1| sun protein [Prosthecochloris aestuarii DSM 271]
gi|194311380|gb|ACF45775.1| sun protein [Prosthecochloris aestuarii DSM 271]
Length = 449
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
Query: 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304
+Q LP ++ LDP++GE +LDMCAAPGGK+T +A L+ + G+V+AVDR NK I++
Sbjct: 243 VQALPCLL----LDPEEGETVLDMCAAPGGKSTFLAELMHNSGKVIAVDRYPNKCRTIRE 298
Query: 305 LAAEMGLKCITTYKLDA 321
A++M + ITT DA
Sbjct: 299 RASQMAISVITTIDSDA 315
>gi|302348820|ref|YP_003816458.1| RNA (cytosine-C(5)-)-methyltransferase [Acidilobus saccharovorans
345-15]
gi|302329232|gb|ADL19427.1| RNA (Cytosine-C(5)-)-methyltransferase [Acidilobus saccharovorans
345-15]
Length = 382
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 64/262 (24%)
Query: 37 KALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQI 96
++L RP +RVNTLK T +L ++ SG+ + Q+
Sbjct: 29 ESLLRPPRRFYLRVNTLKADT----TTMLDLLSASGTR---------------FYVDEQL 69
Query: 97 PGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEK 156
P Y +++ GP +D K V+ +K AE+V G+ +Y PGV+ + V+
Sbjct: 70 P---YAIWIDVKGPFKVDLH------DKVVVADKKSAESVYVGSDLYGPGVLR-AERVKA 119
Query: 157 GDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFR 216
GD V + +P + +G A+M +
Sbjct: 120 GDEVTIVTVDGRP--------------------------------VAEGVAIMDGKEMAE 147
Query: 217 ASEGIAVDMHNRIFQLPSFYDVL---EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPG 273
+G+AV + ++ P ++ EG I+ Q+LPS+ P GE I+D AAPG
Sbjct: 148 HKKGVAVKVTKSVYATPKVRELPGFNEGLIYSQSLPSMWAVAIASPSPGETIIDFNAAPG 207
Query: 274 GKTTAIASLLRDEGEVVAVDRS 295
GKT+ A L + ++A+DR+
Sbjct: 208 GKTSLAAQLAGRKSRIIAIDRA 229
>gi|317967915|ref|ZP_07969305.1| sun protein [Synechococcus sp. CB0205]
Length = 441
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 236 YDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRS 295
YD EG +Q+ + A LDP+ GER+LD CAAPGGK+T +A L+ D+G+V+A+DR
Sbjct: 236 YD--EGHWCVQDRSAQTIAPLLDPKPGERVLDACAAPGGKSTHLAELMGDQGQVLALDRG 293
Query: 296 HNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNE 330
++ + + + +GL CI T DA++ V E
Sbjct: 294 EARLRRVARNSDRLGLGCIETRHGDAVELVSEAPE 328
>gi|323701798|ref|ZP_08113469.1| sun protein [Desulfotomaculum nigrificans DSM 574]
gi|333923478|ref|YP_004497058.1| sun protein [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323533334|gb|EGB23202.1| sun protein [Desulfotomaculum nigrificans DSM 574]
gi|333749039|gb|AEF94146.1| sun protein [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 453
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
A EG+ ++ LPSF EG +Q+ S++ AHAL+P G RI+D+ +APGGKT
Sbjct: 214 APEGLHLNGFLSYQSLPSFQ---EGLFQVQDESSMLVAHALNPASGARIIDVASAPGGKT 270
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
T +A L++D GE+VAVD +K+ I++ +G+ I T DA
Sbjct: 271 THLAQLMKDRGEIVAVDIHPHKLELIKENCQRLGINSIRTLLADA 315
>gi|383754590|ref|YP_005433493.1| putative ribosomal RNA small subunit methyltransferase B
[Selenomonas ruminantium subsp. lactilytica TAM6421]
gi|381366642|dbj|BAL83470.1| putative ribosomal RNA small subunit methyltransferase B
[Selenomonas ruminantium subsp. lactilytica TAM6421]
Length = 444
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
EGI V H + L EG +Q+ S++ AH +DPQ GE I+D C+APGGKTT
Sbjct: 214 EGIRVTSHGALDDLAPLQ---EGLCQVQDESSMLVAHVVDPQPGELIIDCCSAPGGKTTH 270
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+A+L+++EG +VA D +K+ I++ A +G+ I T +DA
Sbjct: 271 MAALMKNEGRIVAGDIYEHKLTRIEENAQRLGIDIIETNLIDA 313
>gi|222054190|ref|YP_002536552.1| sun protein [Geobacter daltonii FRC-32]
gi|221563479|gb|ACM19451.1| sun protein [Geobacter daltonii FRC-32]
Length = 448
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 220 GIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
I +++ + +L SF D G F+Q+ S + A L PQ GER+LD CAAPGGK+T +
Sbjct: 216 AIRINLSGSVSRLKSFRD---GLFFVQDESSQLAAMFLGPQAGERVLDACAAPGGKSTQL 272
Query: 280 ASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
A L+ D GE++A D K+ + + AA +G+ I T LD + ++
Sbjct: 273 AQLMGDRGEILACDVIGRKLKLVDENAARLGISSIRTVLLDTARPLK 319
>gi|240103511|ref|YP_002959820.1| SAM-dependent tRNA/rRNA cytosine-C5 methylase [Thermococcus
gammatolerans EJ3]
gi|239911065|gb|ACS33956.1| SAM-dependent tRNA/rRNA cytosine-C5 methylase [Thermococcus
gammatolerans EJ3]
Length = 451
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 55/81 (67%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+ +Q+L S AH L+P+ GER+LD+ AAPG KT ASL+ ++GE+VAVD S++++
Sbjct: 240 EGKFVIQDLASAYVAHVLNPEPGERVLDLAAAPGSKTFHAASLMENKGEIVAVDYSYDRL 299
Query: 300 MDIQKLAAEMGLKCITTYKLD 320
M +++ +G+K + D
Sbjct: 300 MRMKEKMKILGIKNVKLVHAD 320
>gi|406898154|gb|EKD41861.1| RNA methylase, NOL1/NOP2/sun family, partial [uncultured bacterium]
Length = 348
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 58/90 (64%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G I+LQ+L S + LDP+ G+R+LDMCA+PGGKTT +A+L++++GE++A + +
Sbjct: 124 KGWIYLQSLSSQIPPFVLDPKPGDRVLDMCASPGGKTTQMAALMQNQGEMLACEPEQRRF 183
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRKN 329
++ + G + +LDALK +N
Sbjct: 184 ERLESNVKKQGASIVRCIRLDALKLNLEQN 213
>gi|33860983|ref|NP_892544.1| Sun protein (Fmu protein) [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|33639715|emb|CAE18885.1| Sun protein (Fmu protein) [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 437
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 4/118 (3%)
Query: 209 MSRAGIFRASEGIAVDMHNR-IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD 267
++ I + GIA++ + R I +LP + D G +Q+ S A L+P KGE+ILD
Sbjct: 206 INATAISQLKNGIALNSNPRSIKKLPGYSD---GLWVVQDRSSQWVAPLLNPMKGEKILD 262
Query: 268 MCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325
C+APG KTT +A L D+ E++AVDRS ++ +Q + +K + T K DA V
Sbjct: 263 ACSAPGSKTTHLAQLANDDAEILAVDRSEKRLKILQSNLERLNIKSVKTLKADATNLV 320
>gi|392394789|ref|YP_006431391.1| ribosomal RNA small subunit methyltransferase RsmB
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390525867|gb|AFM01598.1| ribosomal RNA small subunit methyltransferase RsmB
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 453
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 12/127 (9%)
Query: 195 FERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTA 254
ER G+ + G R E + ++ + +LPSF EG +Q+ S + A
Sbjct: 199 LEREGVKVTLGE---------RVPESLVIEEFGSLDKLPSFQ---EGLFTVQDESSQLIA 246
Query: 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
H L+PQ G+++LD C APGGKTT +A + + GE++A D +KV I+ L+A +G+ I
Sbjct: 247 HVLNPQAGQKVLDACGAPGGKTTHLAQRMENRGEILAFDIHPHKVKLIEDLSARLGITII 306
Query: 315 TTYKLDA 321
DA
Sbjct: 307 HPQAGDA 313
>gi|57642239|ref|YP_184717.1| tRNA/rRNA cytosine-C5-methylase NOL1/NOP2/Sun family protein
[Thermococcus kodakarensis KOD1]
gi|57160563|dbj|BAD86493.1| tRNA/rRNA cytosine-C5-methylase, NOL1/NOP2/Sun family, fused to
N-terminal NusB regulator domain [Thermococcus
kodakarensis KOD1]
Length = 450
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 54/75 (72%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+ +Q+L S AH L P+ GER+LD+ AAPG KT A+L+ ++GE+VAVD S++++
Sbjct: 240 EGKFVIQDLASAYVAHVLSPEPGERLLDLAAAPGSKTFHAAALMENKGEIVAVDYSYDRL 299
Query: 300 MDIQKLAAEMGLKCI 314
M +++ A +G+K +
Sbjct: 300 MRMKEKAKVLGVKNV 314
>gi|186684748|ref|YP_001867944.1| sun protein [Nostoc punctiforme PCC 73102]
gi|186467200|gb|ACC83001.1| sun protein [Nostoc punctiforme PCC 73102]
Length = 487
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I +LP F EG +Q+ + + +H LDPQ GE ++D+CAAPGGKTT IA L+ D G+
Sbjct: 262 IQKLPGFK---EGWWTVQDASAQLVSHLLDPQPGEVVIDVCAAPGGKTTHIAELMADSGK 318
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESN 332
+ A DR+ +++ +Q+ + + L+ I Y D+ + + +N ++
Sbjct: 319 IWACDRTASRLRKLQENSQRLNLQSIQIYTGDSRHSNQFQNTAD 362
>gi|428776022|ref|YP_007167809.1| sun protein [Halothece sp. PCC 7418]
gi|428690301|gb|AFZ43595.1| sun protein [Halothece sp. PCC 7418]
Length = 447
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 8/118 (6%)
Query: 215 FRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGG 274
R S G+ +I QLP F EG +Q+ + + ++ L PQ GE I+D CAAPGG
Sbjct: 219 LRLSSGVG-----KIEQLPGF---TEGWWTVQDFSAQLVSYLLSPQAGETIIDACAAPGG 270
Query: 275 KTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESN 332
KTT IA L+ DEG++ A DR+ +++ + A + LK I T DA + + +N ++
Sbjct: 271 KTTHIAELMGDEGKIWACDRAESRLKKVTNNAQRLQLKSIETRVGDARELSQFQNTAD 328
>gi|403667672|ref|ZP_10932972.1| ribosomal RNA small subunit methyltransferase B [Kurthia sp. JC8E]
Length = 454
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG I +Q+ S++ A+ALD Q G R+ DMCAAPGGKTT IA + +EG V+A D +K+
Sbjct: 236 EGVITIQDESSMIPAYALDVQPGMRVYDMCAAPGGKTTHIAEKMNNEGTVIATDLHKHKI 295
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR 327
+ + A +GL I LD KA +
Sbjct: 296 KLVDESAKRLGLSIIEAQMLDGRKATEQ 323
>gi|15615070|ref|NP_243373.1| hypothetical protein BH2507 [Bacillus halodurans C-125]
gi|10175127|dbj|BAB06226.1| BH2507 [Bacillus halodurans C-125]
Length = 450
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 64/109 (58%), Gaps = 11/109 (10%)
Query: 227 NRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDE 286
R+FQ +GE+ +Q+ S++ A A+ P+ GERILD CAAPGGK+T +A + E
Sbjct: 226 TRLFQ--------DGELTIQDESSMLVARAVAPRPGERILDACAAPGGKSTHMAERMDGE 277
Query: 287 GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEP 335
G +V++D +KV I++ A +GL I LDA KA + DEP
Sbjct: 278 GTIVSLDMHRHKVKLIEEQAKRLGLDNIKAQTLDARKA---REVFADEP 323
>gi|325680270|ref|ZP_08159830.1| ribosomal RNA small subunit methyltransferase B [Ruminococcus albus
8]
gi|324107979|gb|EGC02235.1| ribosomal RNA small subunit methyltransferase B [Ruminococcus albus
8]
Length = 429
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q++ S + ALDPQ G+ +LD+CAAPGGKT IA ++ +EG V+A D N+V
Sbjct: 229 EGRFHVQDIASQLCCKALDPQAGDTVLDLCAAPGGKTFTIAEMMGNEGRVLAFDLHPNRV 288
Query: 300 MDIQKLAAEMGLKCIT 315
I+ A +GL C+T
Sbjct: 289 KLIKSGADRLGLSCVT 304
>gi|374582947|ref|ZP_09656041.1| ribosomal RNA small subunit methyltransferase RsmB
[Desulfosporosinus youngiae DSM 17734]
gi|374419029|gb|EHQ91464.1| ribosomal RNA small subunit methyltransferase RsmB
[Desulfosporosinus youngiae DSM 17734]
Length = 452
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 10/154 (6%)
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQG--TAMMSRAGIF-----RASEGIAVDMHN 227
WG+ T ++ P + + L I + T + GI R E + +
Sbjct: 162 WGIEETEALCKVNNEPSPTWIRTNTLKISREDLTERLREEGITVQLGSRVPESLQISNFG 221
Query: 228 RIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEG 287
+ QL SF EG +Q+ S + AH ++PQ G+ +LD C+APGGK+T +A ++++EG
Sbjct: 222 ALDQLDSFR---EGLFTVQDESSQLVAHVVNPQPGQSVLDACSAPGGKSTHLAQMMKNEG 278
Query: 288 EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+++A D +K+ +++LA ++G+ I T DA
Sbjct: 279 KILAFDIHAHKLELVEQLAQKLGITIIETQVGDA 312
>gi|260892752|ref|YP_003238849.1| sun protein [Ammonifex degensii KC4]
gi|260864893|gb|ACX51999.1| sun protein [Ammonifex degensii KC4]
Length = 452
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
A EGI V + LPS+ EG ++Q+ S++ AHAL P G +LD+C APGGK
Sbjct: 213 APEGIRVQGFFDLQHLPSYQ---EGLFYIQDESSMLAAHALAPASGSFVLDVCGAPGGKA 269
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
T +A L+RD G ++ VD +++ + + +GLK + T + DA
Sbjct: 270 THLAELMRDSGRILVVDIYAHRLALVVANSRRLGLKSVETLQADA 314
>gi|126656069|ref|ZP_01727453.1| Fmu, rRNA SAM-dependent methyltransferase [Cyanothece sp. CCY0110]
gi|126622349|gb|EAZ93055.1| Fmu, rRNA SAM-dependent methyltransferase [Cyanothece sp. CCY0110]
Length = 452
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
LP F+ EG +Q+ + + ++ LDPQ GE I+D CAAPGGKTT IA L+ D+G V+A
Sbjct: 235 LPGFH---EGHWTIQDSSAQLVSYLLDPQPGETIIDACAAPGGKTTHIAELMGDQGTVIA 291
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITT 316
DR+ +++ +Q+ A + L I T
Sbjct: 292 CDRTPSRLKKVQQNAQRLQLNSIQT 316
>gi|229104427|ref|ZP_04235096.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock3-28]
gi|228679125|gb|EEL33333.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock3-28]
Length = 354
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 68/116 (58%), Gaps = 10/116 (8%)
Query: 217 ASEGIAV---DMHNRIFQLPSFYDVLEGEIF------LQNLPSIVTAHALDPQKGERILD 267
ASEGI D+ N Q+ +V E F +Q+ S++ A ALDP +GE +LD
Sbjct: 106 ASEGIEAKSGDLSNDAIQIER-GNVAHTEAFKKGFLSIQDESSMLVARALDPNEGETVLD 164
Query: 268 MCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
CAAPGGKTT IA L+ G+V+++D +KV I++ A +GL+ I T LDA K
Sbjct: 165 SCAAPGGKTTHIAERLKGTGKVMSLDLHAHKVRLIKQQAERLGLENIETKALDARK 220
>gi|392426904|ref|YP_006467898.1| ribosomal RNA small subunit methyltransferase RsmB
[Desulfosporosinus acidiphilus SJ4]
gi|391356867|gb|AFM42566.1| ribosomal RNA small subunit methyltransferase RsmB
[Desulfosporosinus acidiphilus SJ4]
Length = 452
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G +Q+ S + AH + P+ G+R+LD C+APGGKTT +A +++DEG +VA D +K+
Sbjct: 232 GYFTVQDESSQLIAHVVSPEAGQRVLDACSAPGGKTTHLAQMMKDEGVIVAFDVHTHKLE 291
Query: 301 DIQKLAAEMGLKCITTYKLDA 321
I++LA +G+ CI T DA
Sbjct: 292 LIEQLAQRLGITCIETRLGDA 312
>gi|87303174|ref|ZP_01085972.1| Sun protein (Fmu protein) [Synechococcus sp. WH 5701]
gi|87282341|gb|EAQ74301.1| Sun protein (Fmu protein) [Synechococcus sp. WH 5701]
Length = 447
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 236 YDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRS 295
YD EG +Q+ + + A LDPQ GER+LD CAAPGGK+T +A L+ D G VVAVDRS
Sbjct: 246 YD--EGHWSVQDRTAQMIAPLLDPQPGERLLDACAAPGGKSTHLAELIGDAGTVVAVDRS 303
Query: 296 HNKVMDIQKLAAEMGLKCITTYKLDA 321
++ ++ A +GL I DA
Sbjct: 304 EGRLRRLRDNARRLGLNAIEPLTADA 329
>gi|171184492|ref|YP_001793411.1| PUA domain-containing protein [Pyrobaculum neutrophilum V24Sta]
gi|170933704|gb|ACB38965.1| PUA domain containing protein [Pyrobaculum neutrophilum V24Sta]
Length = 375
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 124/294 (42%), Gaps = 61/294 (20%)
Query: 18 QVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEAD 77
++ ++F++ + ++TRP IRVNT KTT +++I
Sbjct: 11 ELYKHFLQFLSDSEIDALFLSITRPPRRYYIRVNTAKTTREELI---------------- 54
Query: 78 VASSVKGRLQNGTISESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVL 137
GRL+ ++ + +++ GP I K V+V +K AE+V+
Sbjct: 55 ------GRLRARGVTAYPDERFDDALWMPVEGPFKIPTAR------KRVVVDKKAAESVM 102
Query: 138 RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFER 197
GA +Y PGV+ + HV +G+ V+V + G+ + S +D R
Sbjct: 103 MGADLYAPGVVK-TDHVRRGE--EVNVVSDN---------GVVVAFGVAVSDSDEVMKTR 150
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHAL 257
GLYI T++ +I LP + D G + Q+LP+I H
Sbjct: 151 RGLYIRVETSLYKTP---------------KIRDLPEYRD---GLFYSQSLPAIAVGHVA 192
Query: 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311
+D+ AAPGGK T +A + + VVA DRS K+ +++ +GL
Sbjct: 193 KRAGAATAVDLNAAPGGKATHLAQM---DMRVVAFDRSWPKIERLKREVERLGL 243
>gi|123965723|ref|YP_001010804.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. MIT 9515]
gi|123200089|gb|ABM71697.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. MIT 9515]
Length = 437
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
Query: 214 IFRASEGIAVDMHNR-IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAP 272
I + + G+A++ + R I LP + D G +Q+ S A L+P+KGE+ILD C+AP
Sbjct: 211 INQLNNGVALNSNPRSIKNLPGYKD---GLWVVQDRSSQWVAPLLNPKKGEKILDACSAP 267
Query: 273 GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
G KTT +A+L+ D+ E++AVDRS ++ +Q + +K + T + DA
Sbjct: 268 GSKTTHLAALVNDDAEILAVDRSEKRLKILQSNLERLNIKSVKTLEADA 316
>gi|393201779|ref|YP_006463621.1| tRNA and rRNA cytosine-C5-methylase [Solibacillus silvestris
StLB046]
gi|406664656|ref|ZP_11072431.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
isronensis B3W22]
gi|327441110|dbj|BAK17475.1| tRNA and rRNA cytosine-C5-methylase [Solibacillus silvestris
StLB046]
gi|405387504|gb|EKB46928.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
isronensis B3W22]
Length = 453
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 68/124 (54%), Gaps = 1/124 (0%)
Query: 202 IGQGTAMMSRAGI-FRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQ 260
+ Q + R G+ R SE I +H Q G I +Q+ S++ A L+PQ
Sbjct: 196 VEQVLTTLEREGVKARRSEYIPECLHLESGQAARTGAFRNGLITIQDESSMLPAKVLNPQ 255
Query: 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
G ++LDMCAAPGGKTT +A ++++EG ++A D K+ I++ A +GL I T LD
Sbjct: 256 PGMKVLDMCAAPGGKTTHLAEVMKNEGSILATDLHPKKLDLIEENVARLGLNIIETAPLD 315
Query: 321 ALKA 324
KA
Sbjct: 316 GRKA 319
>gi|428771628|ref|YP_007163418.1| sun protein [Cyanobacterium aponinum PCC 10605]
gi|428685907|gb|AFZ55374.1| sun protein [Cyanobacterium aponinum PCC 10605]
Length = 455
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 59/93 (63%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +Q+ + + H L+PQ GE I+D CAAPGGKTT IA L+ D+G+V+A+D ++
Sbjct: 241 QGLFTIQDASAQLVTHLLNPQAGETIIDACAAPGGKTTHIAELMGDKGKVIAIDTYAKRL 300
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRKNESN 332
I++ A +GL CI + D+ + +N+++
Sbjct: 301 EKIKENATRLGLTCIEVKEGDSSELTEWENQAD 333
>gi|22297753|ref|NP_681000.1| RNA-binding protein [Thermosynechococcus elongatus BP-1]
gi|22293930|dbj|BAC07762.1| RNA-binding protein [Thermosynechococcus elongatus BP-1]
Length = 442
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G +Q+ + +H LDPQ GE ++D CAAPGGKTT IA L+ D+G V+A DRS +++
Sbjct: 232 GHWSVQDRAAQWVSHLLDPQPGEVVIDACAAPGGKTTHIAELMEDQGRVIACDRSPHRLR 291
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
+ + +GLK I + LD+ A
Sbjct: 292 KLAQNRDRLGLKSIEIHILDSAAA 315
>gi|406981882|gb|EKE03270.1| hypothetical protein ACD_20C00225G0014 [uncultured bacterium]
Length = 445
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
E + V HN + +P F EG +Q+ S + + LDPQ+ ++LD+CAAPGGKTT
Sbjct: 207 ECMIVHHHNSVKSIPGFE---EGFWTVQSESSSLVSIVLDPQENGKVLDLCAAPGGKTTH 263
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
IA+L+ D GE+ AVD + ++ +Q +G+K + DA K
Sbjct: 264 IAALMNDTGEITAVDINPKRLEKVQNNCLRLGVKSVKIKAADATK 308
>gi|87125560|ref|ZP_01081405.1| Fmu, rRNA SAM-dependent methyltransferase [Synechococcus sp.
RS9917]
gi|86166860|gb|EAQ68122.1| Fmu, rRNA SAM-dependent methyltransferase [Synechococcus sp.
RS9917]
Length = 454
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
+ Q P + EG +Q+ + A L+P+ GER+LD CAAPGGK+T +A L+ D GE
Sbjct: 244 LRQWPGYA---EGHWCVQDRAAQWVAPLLEPRPGERLLDACAAPGGKSTHLAELIGDAGE 300
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNE 330
V AVDRS ++ + AA +G C+ DA + ++ + +
Sbjct: 301 VWAVDRSAGRLQRLAANAARLGCGCVNALAADACELLQERPQ 342
>gi|398310669|ref|ZP_10514143.1| 16S rRNA methyltransferase B [Bacillus mojavensis RO-H-1]
Length = 447
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GE+ +Q+ S++ A ALDP+ GE +LD CAAPGGK+ IA L+ ++G V ++D +KV
Sbjct: 231 GEVSIQDESSMLVARALDPKPGETVLDACAAPGGKSAHIAELMENKGSVTSLDLHKHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ + +GL I +DA KA
Sbjct: 291 LIKEASERLGLSIIDAKTMDARKA 314
>gi|423448370|ref|ZP_17425249.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG5O-1]
gi|401128964|gb|EJQ36647.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG5O-1]
Length = 444
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A ALDP +GE +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALDPNEGETVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ A +GL+ I T LDA K
Sbjct: 287 RLIKQQAERLGLENIETKALDARK 310
>gi|126649674|ref|ZP_01721910.1| 16S rRNA m(5)C 967 methyltransferase [Bacillus sp. B14905]
gi|126593393|gb|EAZ87338.1| 16S rRNA m(5)C 967 methyltransferase [Bacillus sp. B14905]
Length = 453
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 174 GWGLGITRGTVLQGSQTDPYYFER---SGLYIGQGTAMMSRAGIF-RASEGIAVDMHNRI 229
+GL + G +L + P R + + + Q A + G+ + SE I +H
Sbjct: 166 NYGLEVATG-MLHENNVPPMQTVRVNTTKVTVEQAIAELEAEGLTAKQSEVIPECLHLTN 224
Query: 230 FQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEV 289
Q + EG I +Q+ S++ A+ L+P G R+LDMCAAPGGKTT +A ++++EG +
Sbjct: 225 GQPARTHAFKEGHITIQDESSMIPANVLNPSPGMRVLDMCAAPGGKTTHLAEIMKNEGSI 284
Query: 290 VAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324
+A D +K+ I +GL I T +D KA
Sbjct: 285 LATDLHPHKLDLIDHNTERLGLDIIETAPIDGRKA 319
>gi|423378296|ref|ZP_17355580.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG1O-2]
gi|423441404|ref|ZP_17418310.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG4X2-1]
gi|423464478|ref|ZP_17441246.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG6O-1]
gi|423533820|ref|ZP_17510238.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuB2-9]
gi|423540911|ref|ZP_17517302.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuB4-10]
gi|423547149|ref|ZP_17523507.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuB5-5]
gi|423623059|ref|ZP_17598837.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD148]
gi|401172099|gb|EJQ79320.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuB4-10]
gi|401178870|gb|EJQ86043.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuB5-5]
gi|401259832|gb|EJR66006.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD148]
gi|401636562|gb|EJS54316.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG1O-2]
gi|402418065|gb|EJV50365.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG4X2-1]
gi|402420745|gb|EJV53016.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG6O-1]
gi|402464039|gb|EJV95739.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuB2-9]
Length = 444
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A ALDP +GE +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALDPNEGETVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ A +GL+ I T LDA K
Sbjct: 287 RLIKQQAERLGLENIETKALDARK 310
>gi|385808959|ref|YP_005845355.1| ribosomal RNA small subunit methyltransferase B [Ignavibacterium
album JCM 16511]
gi|383801007|gb|AFH48087.1| Ribosomal RNA small subunit methyltransferase B [Ignavibacterium
album JCM 16511]
Length = 482
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 65/113 (57%), Gaps = 13/113 (11%)
Query: 229 IFQLPSFYDVLEGEIF------LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASL 282
FQL + ++ E F +Q+ + + LD + G R+LDMCAAPGGKT +A+L
Sbjct: 255 FFQLQNLTNITAWEYFAKGYFNIQDESTGLACKLLDVKPGMRVLDMCAAPGGKTAFLAAL 314
Query: 283 LRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEP 335
++D+GE+VA+D+ ++ +++ +GL C+ T + DAL E DEP
Sbjct: 315 MQDKGEIVAIDKFEARLKLLRRNNERLGLTCVRTVESDAL-------EYEDEP 360
>gi|229098334|ref|ZP_04229281.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock3-29]
gi|229117351|ref|ZP_04246729.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock1-3]
gi|228666251|gb|EEL21715.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock1-3]
gi|228685232|gb|EEL39163.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock3-29]
Length = 354
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A ALDP +GE +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 137 KGFLSIQDESSMLVARALDPNEGETVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 196
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ A +GL+ I T LDA K
Sbjct: 197 RLIKQQAERLGLENIETKALDARK 220
>gi|398304097|ref|ZP_10507683.1| 16S rRNA methyltransferase B [Bacillus vallismortis DV1-F-3]
Length = 447
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
L GE+ +Q+ S++ A ALDP+ GE +LD CAAPGGK+ I L+ ++G + ++D +K
Sbjct: 229 LNGEVSIQDESSMLVARALDPKPGETVLDACAAPGGKSAHIGELMENKGSISSLDLHKHK 288
Query: 299 VMDIQKLAAEMGLKCITTYKLDALKA 324
V I++ A +GL I ++DA KA
Sbjct: 289 VKLIKEAADRLGLTIIDAQEMDARKA 314
>gi|404370888|ref|ZP_10976204.1| ribosomal RNA small subunit methyltransferase B [Clostridium sp.
7_2_43FAA]
gi|226912989|gb|EEH98190.1| ribosomal RNA small subunit methyltransferase B [Clostridium sp.
7_2_43FAA]
Length = 439
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 56/84 (66%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG I +Q+ +++ A LD ++G+++LD+CAAPGGKTT IA LL + GEV+A D NK+
Sbjct: 226 EGLITVQDESAMLVAPLLDLKEGDKVLDLCAAPGGKTTHIAELLANSGEVLAFDLHENKL 285
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ A +GL I +DA K
Sbjct: 286 SLIEENAKRLGLNNIVCKAMDATK 309
>gi|427708448|ref|YP_007050825.1| sun protein [Nostoc sp. PCC 7107]
gi|427360953|gb|AFY43675.1| sun protein [Nostoc sp. PCC 7107]
Length = 449
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I LP F EG +Q+ + + +H LDPQ GE ++D CAAPGGKTT IA L++D+G+
Sbjct: 225 IQNLPGF---TEGWWVVQDASAQLVSHLLDPQAGEVVIDTCAAPGGKTTHIAELMQDQGK 281
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCI 314
V A DR+ +++ +Q+ A + L+ I
Sbjct: 282 VWAGDRTASRLRKLQENARRLNLQSI 307
>gi|443652432|ref|ZP_21130849.1| ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa DIANCHI905]
gi|159030883|emb|CAO88564.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443334299|gb|ELS48818.1| ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa DIANCHI905]
Length = 446
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G LQ++ + + H LDPQ GE I+D CAAPGGKTT IA L+ D G ++A D++ +++
Sbjct: 234 GNYTLQDISAQLVTHLLDPQPGETIIDACAAPGGKTTHIAELMGDRGRILACDQTPSRLR 293
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK 358
++ + LK I + D S D P C D I + S LHK
Sbjct: 294 QLEANIKRLDLKAIEIHLGD----------SRDRPQWCGIADRVLIDAPCSGLGTLHK 341
>gi|15921679|ref|NP_377348.1| Sun family protein [Sulfolobus tokodaii str. 7]
gi|15622466|dbj|BAB66457.1| putative RNA methyltransferase [Sulfolobus tokodaii str. 7]
Length = 349
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 123/288 (42%), Gaps = 80/288 (27%)
Query: 37 KALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQI 96
+++ P+ +RVNTLK ++++ +L + ++ EA
Sbjct: 28 RSILVPNSRLYVRVNTLKINVEEILAELNFLERDEDFEEA-------------------- 67
Query: 97 PGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEK 156
+FVK GP+ I+ + +VIV ++ AE+V+ GA VY PG+ + +
Sbjct: 68 ------LFVKLKGPNKIE------EHETKVIVDKRTAESVIMGADVYRPGIKKVLGNGKY 115
Query: 157 GDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFR 216
+VV+ +G+ +G+G ++++ +
Sbjct: 116 VNVVS-----------------------------------ENGVIVGEG-ELVNKGNL-- 137
Query: 217 ASEGIAVDMHNRIFQLPSFYD---VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPG 273
V + N ++ P F D V +G + LQ S+ AH LDP+ E+I+DM A PG
Sbjct: 138 -----VVRVLNPLYSAPKFADLEYVKDGSLILQGKASMYVAHLLDPKPNEKIIDMTAYPG 192
Query: 274 GKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
GK T I L +V+ D + KV ++++ +M + I Y D+
Sbjct: 193 GKLTHIYQ-LEPRSKVIGFDHTKKKVDELREKVKKMKMN-IEVYLADS 238
>gi|317056478|ref|YP_004104945.1| sun protein [Ruminococcus albus 7]
gi|315448747|gb|ADU22311.1| sun protein [Ruminococcus albus 7]
Length = 431
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 52/76 (68%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G+ +Q++ S + ALDPQ G+ +LD+C+APGGKT IA ++ +EG+V+A D N+V
Sbjct: 229 QGKFHVQDIASQLCCKALDPQPGDIVLDLCSAPGGKTFTIAEMMNNEGKVLAFDLHPNRV 288
Query: 300 MDIQKLAAEMGLKCIT 315
I+ A +GL C+T
Sbjct: 289 KLIRSGAERLGLTCVT 304
>gi|385264700|ref|ZP_10042787.1| RsmB [Bacillus sp. 5B6]
gi|385149196|gb|EIF13133.1| RsmB [Bacillus sp. 5B6]
Length = 447
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ A ALDP+ GE +LD CAAPGGK+ IA L+++EG + ++D +KV
Sbjct: 231 GRVSIQDESSMLVARALDPKPGETVLDACAAPGGKSAHIAELMQNEGSLTSLDLHRHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 291 LIKEGAERLGLTIIDAQTMDARKA 314
>gi|119487592|ref|ZP_01621202.1| Fmu, rRNA SAM-dependent methyltransferase [Lyngbya sp. PCC 8106]
gi|119455761|gb|EAW36897.1| Fmu, rRNA SAM-dependent methyltransferase [Lyngbya sp. PCC 8106]
Length = 450
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +Q+ + +H LDPQ GE I+D CAAPGGKTT IA L++D G ++A DR+ +++
Sbjct: 239 QGWWSIQDSSAQWVSHILDPQPGEIIIDACAAPGGKTTHIAELMQDTGTILAFDRAKSRL 298
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRKNESN 332
+Q+ + LK ITT L +R +E N
Sbjct: 299 KKVQQNQERLQLKSITT----QLADIRELSEYN 327
>gi|14521110|ref|NP_126585.1| sun protein (fmu protein) [Pyrococcus abyssi GE5]
gi|5458327|emb|CAB49816.1| Sun/NOL1/NOP nucleolar protein [Pyrococcus abyssi GE5]
gi|380741676|tpe|CCE70310.1| TPA: sun protein (fmu protein) [Pyrococcus abyssi GE5]
Length = 450
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 57/89 (64%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +Q+L S AH L+P+ GER+LD+ AAPG KT A+L+ ++GE+VAVD S++++
Sbjct: 240 KGYFVIQDLASAYVAHVLNPEPGERVLDLAAAPGSKTFHAAALMENKGEIVAVDYSYDRL 299
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRK 328
M +++ +G+K + D + R+
Sbjct: 300 MKMKERMKRLGVKNVKLVHADGQSFIDRE 328
>gi|434404680|ref|YP_007147565.1| ribosomal RNA small subunit methyltransferase RsmB [Cylindrospermum
stagnale PCC 7417]
gi|428258935|gb|AFZ24885.1| ribosomal RNA small subunit methyltransferase RsmB [Cylindrospermum
stagnale PCC 7417]
Length = 449
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 23/165 (13%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I LP F EG +Q+ + + +H LDPQ GE ++D+CAAPGGKTT IA L+ D G+
Sbjct: 225 IQNLPGFR---EGWWTVQDSSAQLVSHLLDPQPGEVVIDVCAAPGGKTTHIAELMGDNGK 281
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITS 348
V A DR+ +++ +Q+ A + L I D S + P N+ D I +
Sbjct: 282 VWACDRTPSRLRKLQQNAQRLNLHSIEICTGD----------SRNLPQFQNTADRVLIDA 331
Query: 349 QTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINA 393
S +H+ + D ++ + E + Q E+ A
Sbjct: 332 PCSGLGTMHR----------HADARWRQTPESVRELSLLQTELLA 366
>gi|223478128|ref|YP_002582529.1| tRNA/RNA cytosine-C5-methylase [Thermococcus sp. AM4]
gi|214033354|gb|EEB74181.1| tRNA/RNA cytosine-C5-methylase [Thermococcus sp. AM4]
Length = 451
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 53/81 (65%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+ +Q+L S AH L P+ GER+LD+ AAPG KT A+L+ + GE+VAVD S++++
Sbjct: 240 EGKFVIQDLASAYVAHVLAPEPGERVLDLAAAPGSKTFHAAALMENRGEIVAVDYSYDRL 299
Query: 300 MDIQKLAAEMGLKCITTYKLD 320
M +++ +G+K + D
Sbjct: 300 MRMKEKMKLLGIKNVKLVHAD 320
>gi|390960865|ref|YP_006424699.1| hypothetical protein containing sun-domain [Thermococcus sp. CL1]
gi|390519173|gb|AFL94905.1| hypothetical protein containing sun-domain [Thermococcus sp. CL1]
Length = 451
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 53/81 (65%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+ +Q+L S AH L P+ GER+LD+ AAPG KT A+L+ + GE+VAVD S++++
Sbjct: 240 EGKFVIQDLASAYVAHVLAPEPGERVLDLAAAPGSKTFHAAALMENRGEIVAVDYSYDRL 299
Query: 300 MDIQKLAAEMGLKCITTYKLD 320
M +++ +G+K + D
Sbjct: 300 MRMREKMKLLGIKNVKLVHAD 320
>gi|320101269|ref|YP_004176861.1| Fmu (Sun) domain-containing protein [Desulfurococcus mucosus DSM
2162]
gi|319753621|gb|ADV65379.1| Fmu (Sun) domain protein [Desulfurococcus mucosus DSM 2162]
Length = 380
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 86/190 (45%), Gaps = 36/190 (18%)
Query: 125 EVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTV 184
V+V K A +++ GA +Y PGV+ SS KGD + L +T
Sbjct: 79 RVVVDEKTAVSLMLGANLYRPGVVKSSSF-RKGDRL----------------LAVT---- 117
Query: 185 LQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDV---LEG 241
R G + A +S + RA +G+ + F+ P ++ +G
Sbjct: 118 ------------RHGTPVACLEATVSSRSLHRAEKGLVAYNTSSPFRAPRLSELDIYSQG 165
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMD 301
+ Q PSI T+ L P+ GE ++DM A+PGGKT+ I L R VVA DRS KV
Sbjct: 166 LFYPQGYPSIGTSRILGPEPGELVVDMNASPGGKTSHIVQLTRGRALVVAFDRSPGKVEK 225
Query: 302 IQKLAAEMGL 311
+++ +GL
Sbjct: 226 LKETLTNLGL 235
>gi|154685990|ref|YP_001421151.1| RsmB [Bacillus amyloliquefaciens FZB42]
gi|154351841|gb|ABS73920.1| RsmB [Bacillus amyloliquefaciens FZB42]
Length = 447
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ A ALDP+ GE +LD CAAPGGK+ IA L+ +EG + ++D +KV
Sbjct: 231 GRVSIQDESSMLVARALDPKPGETVLDACAAPGGKSAHIAELMENEGSLTSLDLHRHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 291 LIKEGAERLGLTIIDAQTMDARKA 314
>gi|375362218|ref|YP_005130257.1| sun protein [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|421731756|ref|ZP_16170879.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451347055|ref|YP_007445686.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens IT-45]
gi|371568212|emb|CCF05062.1| sun protein [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|407073969|gb|EKE46959.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449850813|gb|AGF27805.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens IT-45]
Length = 447
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ A ALDP+ GE +LD CAAPGGK+ IA L+ +EG + ++D +KV
Sbjct: 231 GRVSIQDESSMLVARALDPKPGETVLDACAAPGGKSAHIAELMENEGSLTSLDLHRHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 291 LIKEGAERLGLTIIDAQTMDARKA 314
>gi|379722975|ref|YP_005315106.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus
mucilaginosus 3016]
gi|378571647|gb|AFC31957.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus
mucilaginosus 3016]
Length = 541
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
D EG +Q+ S++ A +DPQ GER+LD CAAPGGKTT +A ++ GE+VA D
Sbjct: 320 DYAEGLYSIQDESSMLVAEWVDPQPGERVLDCCAAPGGKTTHLAEKMQGRGEIVACDVHE 379
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDALK 323
+K I++ A +G + ITT DA +
Sbjct: 380 HKHGLIREQAVRLGHESITTLTADARR 406
>gi|384265156|ref|YP_005420863.1| sun protein [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|387898153|ref|YP_006328449.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
amyloliquefaciens Y2]
gi|380498509|emb|CCG49547.1| sun protein [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|387172263|gb|AFJ61724.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
amyloliquefaciens Y2]
Length = 447
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ A ALDP+ GE +LD CAAPGGK+ IA L+ +EG + ++D +KV
Sbjct: 231 GRVSIQDESSMLVARALDPKPGETVLDACAAPGGKSAHIAELMENEGSLTSLDLHRHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 291 LIKEGAERLGLTIIDAQTMDARKA 314
>gi|150390542|ref|YP_001320591.1| sun protein [Alkaliphilus metalliredigens QYMF]
gi|149950404|gb|ABR48932.1| sun protein [Alkaliphilus metalliredigens QYMF]
Length = 444
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 55/83 (66%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
L+G+I++Q+ S++ A +DP G I+D+C+APGGK T +A L+ ++GEVVA D +K
Sbjct: 229 LKGQIYIQDFSSMLVARIMDPHPGALIMDVCSAPGGKATHLAQLMGNQGEVVARDVHEHK 288
Query: 299 VMDIQKLAAEMGLKCITTYKLDA 321
+ I++ +G+K I T DA
Sbjct: 289 LKLIKENVKRLGVKIIKTEVFDA 311
>gi|452855521|ref|YP_007497204.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|452079781|emb|CCP21538.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 446
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ A ALDP+ GE +LD CAAPGGK+ IA L+ +EG + ++D +KV
Sbjct: 230 GRVSIQDESSMLVARALDPKPGETVLDACAAPGGKSAHIAELMENEGSLTSLDLHRHKVK 289
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 290 LIKEGAERLGLTIIDAQTMDARKA 313
>gi|229086418|ref|ZP_04218594.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock3-44]
gi|228696934|gb|EEL49743.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock3-44]
Length = 431
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 9/110 (8%)
Query: 226 HNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD 285
H FQ +G + +Q+ S++ A AL P +G+++LD CAAPGGKTT IA L+
Sbjct: 208 HTEAFQ--------KGFLSIQDESSMLVARALAPAEGDKVLDSCAAPGGKTTHIAERLKG 259
Query: 286 EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
G+V+++D +KV IQ+ A +GL+ + T LDA K NES D+
Sbjct: 260 TGQVMSLDLHPHKVRLIQQQAKRLGLENVETKALDARKVEEHFANESFDK 309
>gi|394993912|ref|ZP_10386651.1| 16S rRNA methyltransferase B [Bacillus sp. 916]
gi|393805236|gb|EJD66616.1| 16S rRNA methyltransferase B [Bacillus sp. 916]
Length = 447
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ A ALDP+ GE +LD CAAPGGK+ IA L+ +EG + ++D +KV
Sbjct: 231 GRVSIQDESSMLVARALDPKPGETVLDACAAPGGKSAHIAELMENEGSLTSLDLHRHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 291 LIKEGAERLGLTIIDAQTMDARKA 314
>gi|443632757|ref|ZP_21116936.1| RNA-binding Sun protein [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443347580|gb|ELS61638.1| RNA-binding Sun protein [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 447
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GE+ +Q+ S++ A ALDP+ GE +LD CAAPGGK+ I L+ ++G V ++D +KV
Sbjct: 231 GEVSIQDESSMLVARALDPKPGETVLDACAAPGGKSAHIGELMENKGSVTSLDLHKHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 291 LIKEAADRLGLTIIEAKTMDARKA 314
>gi|169827064|ref|YP_001697222.1| ribosomal RNA small subunit methyltransferase B [Lysinibacillus
sphaericus C3-41]
gi|168991552|gb|ACA39092.1| Ribosomal RNA small subunit methyltransferase B [Lysinibacillus
sphaericus C3-41]
Length = 453
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG I +Q+ S++ A+ L P G R+LDMCAAPGGKTT +A ++++EG ++A D +K+
Sbjct: 235 EGHITIQDESSMIPANVLKPSPGMRVLDMCAAPGGKTTHLAEIMKNEGSILATDLHPHKL 294
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
I +GL I T +D KA
Sbjct: 295 DLIDHNTERLGLDIIETAPIDGRKA 319
>gi|152976231|ref|YP_001375748.1| sun protein [Bacillus cytotoxicus NVH 391-98]
gi|152024983|gb|ABS22753.1| sun protein [Bacillus cytotoxicus NVH 391-98]
Length = 444
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 66/110 (60%), Gaps = 9/110 (8%)
Query: 226 HNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD 285
H FQ +G + +Q+ S++ A A++P KG+ ILD CAAPGGKTT +A LR
Sbjct: 221 HTEAFQ--------KGFLSIQDESSMLVARAVEPSKGDMILDSCAAPGGKTTHMAERLRG 272
Query: 286 EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
G+V+++D +KV I++ A +GL+ + T LDA K +NES D+
Sbjct: 273 TGKVMSLDLHDHKVRLIKQQANRLGLENVETKALDARKVQEHFQNESFDK 322
>gi|296331149|ref|ZP_06873623.1| RNA-binding Sun protein [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305674305|ref|YP_003865977.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296151793|gb|EFG92668.1| RNA-binding Sun protein [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305412549|gb|ADM37668.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 447
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GE+ +Q+ S++ A ALDP+ GE +LD CAAPGGK+ I L+ ++G V ++D +KV
Sbjct: 231 GEVSIQDESSMLVARALDPKPGETVLDACAAPGGKSAHIGELMENKGSVTSLDLHKHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 291 LIKEAADRLGLTIIDAKTMDARKA 314
>gi|17228315|ref|NP_484863.1| sun protein [Nostoc sp. PCC 7120]
gi|17130165|dbj|BAB72777.1| sun protein [Nostoc sp. PCC 7120]
Length = 449
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 23/165 (13%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I +LP F +G +Q+ + + H LDPQ GE I+D CAAPGGKTT IA L++DEG+
Sbjct: 225 IQKLPGFS---QGWWIVQDASAQLVGHLLDPQPGEVIIDACAAPGGKTTHIAELMKDEGK 281
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITS 348
V A DR+ +++ +++ A + L I D S + P + D + +
Sbjct: 282 VWAGDRTASRLRKLKENAQRLNLHSIEICIGD----------SRNLPQFYDVADRVLLDA 331
Query: 349 QTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINA 393
S LH+ + D ++ + E M Q+E+ A
Sbjct: 332 PCSGLGTLHR----------HADARWRQTPESVQELSMLQKELLA 366
>gi|55377492|ref|YP_135342.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula marismortui ATCC
43049]
gi|55230217|gb|AAV45636.1| tRNA and rRNA cytosine-C5-methylases [Haloarcula marismortui ATCC
43049]
Length = 318
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIA---VDMHNRIFQLP-----SFYDVLEGEIFLQNLP 249
S + + A + R A IA VD H+ +F LP + + G I Q
Sbjct: 42 SAIRVNTIKATVERVRTALADADIAYDPVDWHDGLFVLPEDSPGANWPYFHGWIHGQEEV 101
Query: 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM 309
S++ A LDPQ GER+ D CAAPG KTT +A+L+ D GEVVA D + ++ ++ +
Sbjct: 102 SVIPATVLDPQPGERVWDACAAPGSKTTQLAALMEDTGEVVATDNNLGRISALRTNTERL 161
Query: 310 GLKCITTYKLD 320
G + D
Sbjct: 162 GATTVAVTHED 172
>gi|386725760|ref|YP_006192086.1| 16S rRNA methyltransferase B [Paenibacillus mucilaginosus K02]
gi|384092885|gb|AFH64321.1| 16S rRNA methyltransferase B [Paenibacillus mucilaginosus K02]
Length = 505
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
D EG +Q+ S++ A +DPQ GER+LD CAAPGGKTT +A ++ GE+VA D
Sbjct: 284 DYAEGLYSIQDESSMLVAEWVDPQPGERVLDCCAAPGGKTTHLAEKMQGRGEIVACDVHE 343
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDALK 323
+K I++ A +G + ITT DA +
Sbjct: 344 HKHGLIREQAVRLGHESITTLTADARR 370
>gi|341582142|ref|YP_004762634.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus sp. 4557]
gi|340809800|gb|AEK72957.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus sp. 4557]
Length = 451
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+ +Q+L S AH L P+ GER+LD+ AAPG KT A+L+ ++GE++AVD S++++
Sbjct: 240 EGKFVIQDLASAYVAHVLAPEPGERVLDLAAAPGSKTFHAAALMENKGEIIAVDYSYDRL 299
Query: 300 MDIQKLAAEMGLKCITTYKLD 320
M +++ +G+K + D
Sbjct: 300 MRMKEKMKLLGIKNVKLVHAD 320
>gi|448656985|ref|ZP_21682524.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula californiae ATCC
33799]
gi|445763027|gb|EMA14231.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula californiae ATCC
33799]
Length = 303
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIA---VDMHNRIFQLP-----SFYDVLEGEIFLQNLP 249
S + + A + R A IA VD H+ +F LP + + G I Q
Sbjct: 27 SAIRVNTIKATVERVRTALADADIAYDPVDWHDGLFVLPEDSPGANWPYFHGWIHGQEEV 86
Query: 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM 309
S++ A LDPQ GER+ D CAAPG KTT +A+L+ D GEVVA D + ++ ++ +
Sbjct: 87 SVIPATVLDPQPGERVWDACAAPGSKTTQLAALMEDTGEVVATDNNLGRISALRTNTERL 146
Query: 310 GLKCITTYKLD 320
G + D
Sbjct: 147 GATTVAVTHED 157
>gi|350265887|ref|YP_004877194.1| ribosomal RNA small subunit methyltransferase B [Bacillus subtilis
subsp. spizizenii TU-B-10]
gi|349598774|gb|AEP86562.1| ribosomal RNA small subunit methyltransferase B [Bacillus subtilis
subsp. spizizenii TU-B-10]
Length = 447
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GE+ +Q+ S++ A ALDP+ GE +LD CAAPGGK+ I L+ ++G V ++D +KV
Sbjct: 231 GEVSIQDESSMLVARALDPKPGETVLDACAAPGGKSAHIGELMENKGSVTSLDLHKHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 291 LIKEAADRLGLTIIDAKTMDARKA 314
>gi|299535921|ref|ZP_07049241.1| ribosomal RNA small subunit methyltransferase B [Lysinibacillus
fusiformis ZC1]
gi|424738860|ref|ZP_18167289.1| ribosomal RNA small subunit methyltransferase B [Lysinibacillus
fusiformis ZB2]
gi|298728673|gb|EFI69228.1| ribosomal RNA small subunit methyltransferase B [Lysinibacillus
fusiformis ZC1]
gi|422947344|gb|EKU41741.1| ribosomal RNA small subunit methyltransferase B [Lysinibacillus
fusiformis ZB2]
Length = 453
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG I +Q+ S++ A+ L+P G R+LDMCAAPGGKTT IA ++++EG ++A D +K+
Sbjct: 235 EGMITIQDESSMIPANVLNPSPGMRVLDMCAAPGGKTTHIAEIMQNEGSILATDLHPHKL 294
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
I +GL + T +D KA
Sbjct: 295 DLIDHNTERLGLDIVETAPIDGRKA 319
>gi|384175316|ref|YP_005556701.1| ribosomal RNA small subunit methyltransferase B [Bacillus subtilis
subsp. subtilis str. RO-NN-1]
gi|349594540|gb|AEP90727.1| ribosomal RNA small subunit methyltransferase B [Bacillus subtilis
subsp. subtilis str. RO-NN-1]
Length = 447
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GE+ +Q+ S++ A ALDP+ E +LD CAAPGGK+ IA L++++G V+++D +KV
Sbjct: 231 GEVSIQDESSMLVARALDPKPDETVLDACAAPGGKSAHIAELMKNKGSVMSLDLHKHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 291 LIKEAADRLGLTIIHAETMDARKA 314
>gi|16078637|ref|NP_389456.1| RNA-binding Sun protein [Bacillus subtilis subsp. subtilis str.
168]
gi|221309449|ref|ZP_03591296.1| hypothetical protein Bsubs1_08691 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313774|ref|ZP_03595579.1| hypothetical protein BsubsN3_08627 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318698|ref|ZP_03599992.1| hypothetical protein BsubsJ_08561 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322969|ref|ZP_03604263.1| hypothetical protein BsubsS_08667 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402775819|ref|YP_006629763.1| RNA-binding Sun protein [Bacillus subtilis QB928]
gi|418033279|ref|ZP_12671756.1| hypothetical protein BSSC8_27000 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|452914583|ref|ZP_21963210.1| ribosomal RNA small subunit methyltransferase B [Bacillus subtilis
MB73/2]
gi|3915867|sp|P94464.2|RSMB_BACSU RecName: Full=Ribosomal RNA small subunit methyltransferase B;
AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase
RsmB
gi|2337803|emb|CAA74264.1| putative Fmu protein [Bacillus subtilis subsp. subtilis str. 168]
gi|2633946|emb|CAB13447.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus subtilis
subsp. subtilis str. 168]
gi|351469427|gb|EHA29603.1| hypothetical protein BSSC8_27000 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402481001|gb|AFQ57510.1| RNA-binding Sun protein [Bacillus subtilis QB928]
gi|407958981|dbj|BAM52221.1| RNA-binding Sun protein [Synechocystis sp. PCC 6803]
gi|407964558|dbj|BAM57797.1| RNA-binding Sun protein [Bacillus subtilis BEST7003]
gi|452117003|gb|EME07398.1| ribosomal RNA small subunit methyltransferase B [Bacillus subtilis
MB73/2]
Length = 447
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GE+ +Q+ S++ A ALDP+ E +LD CAAPGGK+ IA L++++G V ++D +KV
Sbjct: 231 GEVSIQDESSMLVARALDPKSDETVLDACAAPGGKSAHIAELMKNKGSVTSLDLHKHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 291 LIKEAADRLGLTIIHAETMDARKA 314
>gi|344211568|ref|YP_004795888.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula hispanica ATCC
33960]
gi|343782923|gb|AEM56900.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula hispanica ATCC
33960]
Length = 303
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 223 VDMHNRIFQLP-----SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
VD H+ +F LP + + G I Q S++ A LDPQ GER+ D CAAPG KTT
Sbjct: 55 VDWHDGLFVLPEDSPGANWPYFHGWIHGQEEVSVIPATVLDPQPGERVWDACAAPGSKTT 114
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
+A+L+ D GEVVA D + ++ ++ +G + D
Sbjct: 115 QLAALIEDTGEVVATDNNLGRISALRTNTERLGATTVAVTHED 157
>gi|449094266|ref|YP_007426757.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus subtilis
XF-1]
gi|449028181|gb|AGE63420.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus subtilis
XF-1]
Length = 447
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GE+ +Q+ S++ A ALDP+ E +LD CAAPGGK+ IA L++++G V ++D +KV
Sbjct: 231 GEVSIQDESSMLVARALDPKSDETVLDACAAPGGKSAHIAELMKNKGSVTSLDLHKHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 291 LIKEAADRLGLTIIHAETMDARKA 314
>gi|430759003|ref|YP_007209724.1| ribosomal RNA small subunit methyltransferase B [Bacillus subtilis
subsp. subtilis str. BSP1]
gi|430023523|gb|AGA24129.1| Ribosomal RNA small subunit methyltransferase B [Bacillus subtilis
subsp. subtilis str. BSP1]
Length = 447
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GE+ +Q+ S++ A ALDP+ E +LD CAAPGGK+ IA L++++G V ++D +KV
Sbjct: 231 GEVSIQDESSMLVARALDPKSDETVLDACAAPGGKSAHIAELMKNKGSVTSLDLHKHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 291 LIKEAADRLGLTIIHAETMDARKA 314
>gi|315924509|ref|ZP_07920730.1| RNA methyltransferase Sun [Pseudoramibacter alactolyticus ATCC
23263]
gi|315622213|gb|EFV02173.1| RNA methyltransferase Sun [Pseudoramibacter alactolyticus ATCC
23263]
Length = 440
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 55/84 (65%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ +++ A LDP+ GERILDMCAAPGGKTT +A L+ D GE++A D +++
Sbjct: 241 DGWLTIQDQGAMLIAELLDPRPGERILDMCAAPGGKTTHLAQLMSDAGEIIARDIYPSRL 300
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I+ A +G+ I T D ++
Sbjct: 301 QLIEDAAKRLGISNIKTELWDGIQ 324
>gi|448666899|ref|ZP_21685544.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula amylolytica JCM
13557]
gi|445772030|gb|EMA23086.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula amylolytica JCM
13557]
Length = 303
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 223 VDMHNRIFQLP-----SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
VD H+ +F LP + + G I Q S++ A LDPQ GER+ D CAAPG KTT
Sbjct: 55 VDWHDGLFVLPEDSPGANWPYFHGWIHGQEEVSVIPATVLDPQPGERVWDACAAPGSKTT 114
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
+A+L+ D GEVVA D + ++ ++ +G + D
Sbjct: 115 QLAALMEDTGEVVATDNNLGRISALRTNTERLGATTVAVTHED 157
>gi|284928897|ref|YP_003421419.1| ribosomal RNA small subunit methyltransferase RsmB [cyanobacterium
UCYN-A]
gi|284809356|gb|ADB95061.1| ribosomal RNA small subunit methyltransferase RsmB [cyanobacterium
UCYN-A]
Length = 453
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I LP F ++G+ +Q++ + + ++ LDP+ GE ++D CAAPGGKTT IA L+RD+G
Sbjct: 228 IKNLPGF---IKGDWTVQDISAQLVSYLLDPKIGETVIDACAAPGGKTTHIAELMRDKGL 284
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
++A DR +++ IQ+ + L+ I K D+
Sbjct: 285 ILACDRISSRLTKIQQNIERLKLRSIKLVKGDS 317
>gi|294791792|ref|ZP_06756940.1| ribosomal RNA small subunit methyltransferase B [Veillonella sp.
6_1_27]
gi|294457022|gb|EFG25384.1| ribosomal RNA small subunit methyltransferase B [Veillonella sp.
6_1_27]
Length = 451
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 238 VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297
VLEG I + S++ AH +DPQ GERILD CAAPGGK+ +ASL+ + G +++ D +
Sbjct: 238 VLEGHITFMDKASMLVAHVVDPQPGERILDCCAAPGGKSMHMASLMNNTGAIMSCDIYDH 297
Query: 298 KVMDIQKLAAEMGLKCITT 316
K+ I + A +G+ I+T
Sbjct: 298 KLELINQNAERLGVSIIST 316
>gi|402833087|ref|ZP_10881709.1| ribosomal RNA small subunit methyltransferase B [Selenomonas sp.
CM52]
gi|402281454|gb|EJU30089.1| ribosomal RNA small subunit methyltransferase B [Selenomonas sp.
CM52]
Length = 443
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
EGI H + L S +G +Q+ S++ AH L P+ GE +LD+C+APGGKTT
Sbjct: 214 EGILCLRHGSLDALESLQ---QGLFQVQDESSMLVAHILAPEPGEFVLDVCSAPGGKTTH 270
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
IA+ + D G +VA+D +K+ I + +G+K + LDA +A RR + D
Sbjct: 271 IAASMGDRGRIVALDVHEHKMRRIAENCERLGIKSVEPLLLDAREAGRRFSRQAD 325
>gi|193700064|ref|XP_001946119.1| PREDICTED: putative methyltransferase NSUN5-like [Acyrthosiphon
pisum]
Length = 459
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 235 FYDVLE---GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
FY++ E G + +Q+ S + A+ L+P+ +LDMCAAPG KT+ +A+++++ G++ A
Sbjct: 74 FYEIEEYNNGSLIVQDKASCLAAYLLNPKSNSTVLDMCAAPGMKTSHLAAIMQNTGKLYA 133
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322
VDRS + +Q + + G++ + T+ +DAL
Sbjct: 134 VDRSKERFYILQNMLEKYGVQNVETFNMDAL 164
>gi|448630650|ref|ZP_21673230.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula vallismortis ATCC
29715]
gi|445755683|gb|EMA07066.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula vallismortis ATCC
29715]
Length = 303
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 223 VDMHNRIFQLP-----SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
VD H+ +F LP + + G I Q S++ A LDPQ GER+ D CAAPG KTT
Sbjct: 55 VDWHDGLFVLPEDSPGANWPYFHGWIHGQEEVSVIPATVLDPQPGERVWDACAAPGSKTT 114
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
+A+L+ D GEVVA D + ++ ++ +G + D
Sbjct: 115 QLAALMDDTGEVVATDNNLGRISALRTNTERLGATTVAVTHED 157
>gi|425450552|ref|ZP_18830377.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 7941]
gi|389768554|emb|CCI06369.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 7941]
Length = 446
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G LQ++ + + + LDPQ GE I+D CAAPGGKTT IA L+ D+G ++A D++ +++
Sbjct: 234 GNYTLQDISAQLVTYLLDPQPGETIIDACAAPGGKTTHIAELMGDQGRILACDQTASRLR 293
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEV 360
++ + LK I + D S D P C D I + S LHK +
Sbjct: 294 QLEANIKRLDLKAIEIHLGD----------SRDRPQWCGIADRVLIDAPCSGLGTLHK-L 342
Query: 361 PSI 363
P I
Sbjct: 343 PDI 345
>gi|386758297|ref|YP_006231513.1| protein RsmB [Bacillus sp. JS]
gi|384931579|gb|AFI28257.1| RsmB [Bacillus sp. JS]
Length = 447
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GE+ +Q+ S++ A ALDP+ E +LD CAAPGGK+ IA L++++G V ++D +KV
Sbjct: 231 GEVSIQDESSMLVARALDPKPDETVLDACAAPGGKSAHIAELMKNKGSVTSLDLHKHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 291 LIKEAADRLGLTIIHAETMDARKA 314
>gi|321315340|ref|YP_004207627.1| 16S rRNA methyltransferase B [Bacillus subtilis BSn5]
gi|320021614|gb|ADV96600.1| 16S rRNA methyltransferase B [Bacillus subtilis BSn5]
Length = 447
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GE+ +Q+ S++ A ALDP+ E +LD CAAPGGK+ IA L++++G V ++D +KV
Sbjct: 231 GEVSIQDESSMLVARALDPKPDETVLDACAAPGGKSAHIAELMKNKGSVTSLDLHKHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 291 LIKEAADRLGLTIIHAETMDARKA 314
>gi|432108175|gb|ELK33095.1| Putative methyltransferase NSUN6 [Myotis davidii]
Length = 282
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 21/126 (16%)
Query: 125 EVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTV 184
E IV +C AVLRGA VYVPG+++ S ++ GDVV+V + +G
Sbjct: 20 EAIVGAQCGNAVLRGAHVYVPGIVSASKFMKAGDVVSVYSDI--------------KGKC 65
Query: 185 LQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRA---SEGIAVDMHNRIFQLPSFYDVLEG 241
+G++ F+ + +++G G + +SR GIF +GI + M +++ PSF +VL
Sbjct: 66 KKGAKE----FDGTKVFLGNGISELSRRGIFNGLPERKGIGIRMTEPVYRSPSFDNVLPS 121
Query: 242 EIFLQN 247
+FLQ+
Sbjct: 122 YLFLQD 127
>gi|448688658|ref|ZP_21694395.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula japonica DSM 6131]
gi|445778528|gb|EMA29470.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula japonica DSM 6131]
Length = 303
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 223 VDMHNRIFQLP-----SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
VD H+ +F LP + + +G I Q S++ A LDPQ GER+ D CAAPG KTT
Sbjct: 55 VDWHDGLFVLPEDSPGANWPYFQGWIHGQEEVSVIPAEVLDPQPGERVWDACAAPGSKTT 114
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
+A+L+ D GE+VA D + ++ ++ +G + D
Sbjct: 115 QLAALMDDTGELVATDNNLGRISALRTNTERLGATTVAVTHED 157
>gi|448640022|ref|ZP_21677170.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula sinaiiensis ATCC
33800]
gi|445762549|gb|EMA13770.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula sinaiiensis ATCC
33800]
Length = 303
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 198 SGLYIGQGTAMMSRAGIFRASEGIA---VDMHNRIFQLP-----SFYDVLEGEIFLQNLP 249
S + + A + R A IA VD H+ +F LP + + G I Q
Sbjct: 27 SAIRVNTIKATVERVRTALADADIAYDPVDWHDGLFVLPEDSPGANWPYFHGWIHGQEEV 86
Query: 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM 309
S++ A LDPQ GER+ D CAAPG KTT +A+L+ D GEVVA D + ++ ++ +
Sbjct: 87 SVIPATVLDPQPGERVWDACAAPGSKTTQLAALMDDTGEVVATDNNLGRISALRTNTERL 146
Query: 310 GLKCITTYKLD 320
G + D
Sbjct: 147 GATTVAVTHED 157
>gi|318040449|ref|ZP_07972405.1| sun protein [Synechococcus sp. CB0101]
Length = 454
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
+ +LP F EG +Q+ + A LDPQ GERILD CAAPGGK+T +A + D+G
Sbjct: 242 LSRLPGFG---EGHWCVQDRAAQRIAPLLDPQPGERILDACAAPGGKSTHLAEWMGDQGM 298
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITS 348
V+A+DR ++ + + A +GL+ I DA + ++P + S D + +
Sbjct: 299 VLALDRGEARLRRVSRNAERLGLRSIAVQHGDATAL------AQEQPELQGSFDRILVDA 352
Query: 349 QTS 351
S
Sbjct: 353 PCS 355
>gi|258515525|ref|YP_003191747.1| sun protein [Desulfotomaculum acetoxidans DSM 771]
gi|257779230|gb|ACV63124.1| sun protein [Desulfotomaculum acetoxidans DSM 771]
Length = 452
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
A EG+ V+ + P+F + G +Q+ SI+ HA+ P R++D CAAPGGKT
Sbjct: 214 APEGLNVEGFTSLRNFPAFRN---GLFQVQDESSILAGHAVKPAVNCRVIDACAAPGGKT 270
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
T +A L+ ++GE++A D +K+ I+ +G+KC+ LD+
Sbjct: 271 THLAQLMENKGEIIAADIYPHKLDLIEDNCQRLGIKCVKIINLDS 315
>gi|354582479|ref|ZP_09001381.1| sun protein [Paenibacillus lactis 154]
gi|353199878|gb|EHB65340.1| sun protein [Paenibacillus lactis 154]
Length = 454
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG I +Q+ S++ A A+ P+ G R+LD CAAPGGK+ + L++DEG +VA D +K
Sbjct: 239 EGMISIQDESSMLVAEAVGPEPGMRVLDCCAAPGGKSAHMGELMKDEGSIVANDIHSHKG 298
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I AA +GL CI T DA++
Sbjct: 299 KLIADQAARLGLDCIRTVTGDAIE 322
>gi|86609413|ref|YP_478175.1| ribosomal RNA small subunit methyltransferase B [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557955|gb|ABD02912.1| ribosomal RNA small subunit methyltransferase B [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 457
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I LP F +G +Q+ + H LDPQ GER++D CAAPGGKTT IA ++D GE
Sbjct: 232 ITALPGFA---QGWWSVQDASAQQVVHWLDPQPGERVIDCCAAPGGKTTQIAQHMQDRGE 288
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322
+ A+DR +++ +++ +GL I +D L
Sbjct: 289 IWALDRHPHRLRRLEENRQRLGLSSIRPLAIDLL 322
>gi|423511899|ref|ZP_17488430.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuA2-1]
gi|402450160|gb|EJV81994.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuA2-1]
Length = 444
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P+KG+ +LD CAAPGGKTT IA L G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPKKGDTVLDSCAAPGGKTTHIAERLDGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NES D+
Sbjct: 287 RLIEQQAKRLGLENVETMALDARKVQEHFANESFDK 322
>gi|332159134|ref|YP_004424413.1| sun protein (fmu protein) [Pyrococcus sp. NA2]
gi|331034597|gb|AEC52409.1| sun protein (fmu protein) [Pyrococcus sp. NA2]
Length = 450
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 53/75 (70%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +Q+L S AH L+P+ GER+LD+ AAPG KT A+L+ ++GE+VAVD S++++
Sbjct: 240 KGYFVIQDLASAYVAHVLNPEPGERVLDLAAAPGSKTFHAAALMENKGEIVAVDYSYDRL 299
Query: 300 MDIQKLAAEMGLKCI 314
M +++ +G+K +
Sbjct: 300 MKMKERMKILGVKNV 314
>gi|407706324|ref|YP_006829909.1| transition state regulatory protein AbrB [Bacillus thuringiensis
MC28]
gi|407384009|gb|AFU14510.1| sun protein [Bacillus thuringiensis MC28]
Length = 444
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 57/84 (67%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +GE +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNEGETVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ A +GL+ I T LDA K
Sbjct: 287 RLIKQQAERLGLENIETKALDARK 310
>gi|443328422|ref|ZP_21057020.1| ribosomal RNA small subunit methyltransferase RsmB [Xenococcus sp.
PCC 7305]
gi|442792007|gb|ELS01496.1| ribosomal RNA small subunit methyltransferase RsmB [Xenococcus sp.
PCC 7305]
Length = 480
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I QLP + EG +Q+ + + H LDPQ GE I+D CAAPGGKTT IA LL D G
Sbjct: 253 IDQLPGYR---EGWWTVQDGSAQLVTHFLDPQPGESIIDACAAPGGKTTHIAELLGDRGT 309
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCI 314
+ A DRS ++ ++ AA + L I
Sbjct: 310 IWACDRSKKRLQKVRANAARLQLNSI 335
>gi|337750137|ref|YP_004644299.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus
mucilaginosus KNP414]
gi|336301326|gb|AEI44429.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus
mucilaginosus KNP414]
Length = 485
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
D EG +Q+ S++ A +DPQ GER+LD CAAPGGKTT +A ++ GE+VA D
Sbjct: 264 DYAEGLYSIQDESSMLVAEWVDPQPGERVLDCCAAPGGKTTHLAEKMQGRGEIVACDVHE 323
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDALK 323
+K I++ A +G + ITT DA +
Sbjct: 324 HKHGLIREQADRLGHESITTLTADARR 350
>gi|429505125|ref|YP_007186309.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429486715|gb|AFZ90639.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 447
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ A ALDP+ GE +LD CAAPGGK+ IA L+ +EG + ++D +KV
Sbjct: 231 GGVSIQDESSMLVARALDPKPGETVLDACAAPGGKSAHIAELMENEGSLTSLDLHRHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 291 LIKEGAERLGLTIIDAQTMDARKA 314
>gi|428279169|ref|YP_005560904.1| hypothetical protein BSNT_02587 [Bacillus subtilis subsp. natto
BEST195]
gi|291484126|dbj|BAI85201.1| hypothetical protein BSNT_02587 [Bacillus subtilis subsp. natto
BEST195]
Length = 447
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GE+ +Q+ S++ A ALDP+ E +LD CAAPGGK+ IA L++++G V ++D +KV
Sbjct: 231 GEVSIQDESSMLVARALDPKPDETVLDACAAPGGKSAHIAELMQNKGSVTSLDLHKHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 291 LIKEAADRLGLTIIHAETMDARKA 314
>gi|159905923|ref|YP_001549585.1| RNA methylase [Methanococcus maripaludis C6]
gi|159887416|gb|ABX02353.1| RNA methylase, NOL1/NOP2/sun family [Methanococcus maripaludis C6]
Length = 275
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 54/83 (65%)
Query: 230 FQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEV 289
F + S + L G FLQ++ SI+ + L+P K + +LDMCAAPGGKTT +A L+ +EG +
Sbjct: 56 FSMGSTPEYLLGYYFLQSISSIIPSVTLNPTKDDNLLDMCAAPGGKTTHLAQLMENEGSI 115
Query: 290 VAVDRSHNKVMDIQKLAAEMGLK 312
+AV+ + N++ ++ MG K
Sbjct: 116 LAVEINKNRLKSLRSNINRMGFK 138
>gi|442805500|ref|YP_007373649.1| ribosomal RNA small subunit methyltransferase B [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442741350|gb|AGC69039.1| ribosomal RNA small subunit methyltransferase B [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 449
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 54/83 (65%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G+I +Q+ S++ A LDP+ GE+ILD CAAPGGKTT I L+++ G + A D +K+
Sbjct: 232 KGKITVQDESSMIVARILDPKPGEKILDTCAAPGGKTTHIGQLMQNRGHIDAWDVHEHKI 291
Query: 300 MDIQKLAAEMGLKCITTYKLDAL 322
I + A +G++ I + DAL
Sbjct: 292 ALINENAKRLGVEIINASQQDAL 314
>gi|425436930|ref|ZP_18817360.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9432]
gi|389678290|emb|CCH92851.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9432]
Length = 446
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G LQ++ + + + LDPQ GE I+D CAAPGGKTT IA L+ D+G ++A D++ +++
Sbjct: 234 GNYTLQDISAQLVTYLLDPQPGETIIDACAAPGGKTTHIAELMGDQGRILACDQTASRLR 293
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK 358
++ + LK I + D S D P C D I + S LHK
Sbjct: 294 QLEANIKRLDLKAIEIHLGD----------SRDRPQWCGIADRVLIDAPCSGLGTLHK 341
>gi|212225119|ref|YP_002308355.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus onnurineus NA1]
gi|212010076|gb|ACJ17458.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus onnurineus NA1]
Length = 450
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G+ +Q+L S AH L P+ GER+LD+ AAPG KT A+L+ ++GE+VAVD S++++
Sbjct: 240 QGKFVIQDLASAYVAHVLAPEPGERVLDLAAAPGSKTFHAAALMENKGEIVAVDYSYDRL 299
Query: 300 MDIQKLAAEMGLKCITTYKLD 320
M +++ +G+K + D
Sbjct: 300 MRMKEKMKLLGIKNVKLVHAD 320
>gi|20093735|ref|NP_613582.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
gi|19886632|gb|AAM01512.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
Length = 449
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG I Q+ + + L+PQ GERI D+CAAPGGKTT IA L DE E++AVD S ++
Sbjct: 227 EGHIVPQDEAAALVTEILNPQPGERIADLCAAPGGKTTHIAQLTEDEAEILAVDVSRVRL 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
+++ A M + I + D +
Sbjct: 287 RRLERFAERMVFENIEVLRADVRR 310
>gi|448470216|ref|ZP_21600413.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum kocurii JCM
14978]
gi|445808294|gb|EMA58366.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum kocurii JCM
14978]
Length = 316
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 217 ASEGIA---VDMHNRIFQLPS-----FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDM 268
A EG+A VD H+ +F+LP + + G Q S++ ALDPQ GER+ D
Sbjct: 46 AEEGVAYEAVDWHDGLFRLPDGNPGGNWPYVHGWTHGQEEVSVLPGLALDPQPGERVWDA 105
Query: 269 CAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
CAAPG KTT IA + DEG VVA D + ++ ++ A +G+ DA
Sbjct: 106 CAAPGSKTTQIADAMGDEGTVVANDNNLGRLSALRHNAERLGITNAIVTNQDA 158
>gi|375085444|ref|ZP_09732083.1| ribosomal RNA small subunit methyltransferase B [Megamonas
funiformis YIT 11815]
gi|374567314|gb|EHR38537.1| ribosomal RNA small subunit methyltransferase B [Megamonas
funiformis YIT 11815]
Length = 442
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
A EGI H + QL + G +Q+ S++ AH +DP+ E I+D C+APGGKT
Sbjct: 209 APEGIICKTHTSLNQLAPLQN---GFAQVQDESSMLVAHVVDPKPNEFIIDTCSAPGGKT 265
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
T +A+L++++G+++A D +K+ IQ A +G+ I LDA
Sbjct: 266 THMATLMQNKGKIIACDIYEHKLKLIQDNANRLGINIIEPKLLDA 310
>gi|158320464|ref|YP_001512971.1| sun protein [Alkaliphilus oremlandii OhILAs]
gi|158140663|gb|ABW18975.1| sun protein [Alkaliphilus oremlandii OhILAs]
Length = 445
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 64/104 (61%), Gaps = 5/104 (4%)
Query: 217 ASEGIAVD-MHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGK 275
E I V +HN + FY +G I +Q++ S++ A AL P++GE ++D+C+APGGK
Sbjct: 210 VEEAIVVKGIHN--IEKTDFYK--KGYIQIQDISSMLVAKALAPKEGELVMDICSAPGGK 265
Query: 276 TTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKL 319
TT IA L+ ++G+++A D +K+ I + A +G+ I T K
Sbjct: 266 TTHIAQLMNNKGKIIARDIHEHKLKLIDRTAKRLGIHIIQTEKF 309
>gi|75910625|ref|YP_324921.1| rRNA SAM-dependent methyltransferase [Anabaena variabilis ATCC
29413]
gi|75704350|gb|ABA24026.1| Fmu, rRNA SAM-dependent methyltransferase [Anabaena variabilis ATCC
29413]
Length = 449
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 23/163 (14%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I +LP F +G +Q+ + + +H LDPQ GE I+D CAAPGGKTT IA L++D+G+
Sbjct: 225 IQKLPGFS---QGWWVVQDASAQLVSHLLDPQPGEVIIDACAAPGGKTTHIAELMKDQGK 281
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITS 348
V A DR+ +++ +++ A + L I D S + P N D + +
Sbjct: 282 VWAGDRTASRLRKLKENAQRLNLHSIEICTGD----------SRNLPQFYNVADRVLLDA 331
Query: 349 QTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEI 391
S LH+ + D ++ + E Q+E+
Sbjct: 332 PCSGLGTLHR----------HADARWRQTPESVQELSTLQQEL 364
>gi|14590913|ref|NP_142986.1| fmu protein [Pyrococcus horikoshii OT3]
gi|3257494|dbj|BAA30177.1| 450aa long hypothetical fmu protein [Pyrococcus horikoshii OT3]
Length = 450
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 53/75 (70%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +Q+L S AH L+P+ GER+LD+ AAPG KT A+L+ + GE+VAVD S++++
Sbjct: 240 KGYFVIQDLASAYVAHVLNPEPGERVLDLAAAPGSKTFHAAALMENRGEIVAVDYSYDRL 299
Query: 300 MDIQKLAAEMGLKCI 314
+ +++ ++G+K +
Sbjct: 300 IKMRERMKKLGVKNV 314
>gi|311068095|ref|YP_003973018.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus atrophaeus
1942]
gi|310868612|gb|ADP32087.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus atrophaeus
1942]
Length = 447
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G++ +Q+ S++ A AL P+ GE ILD CAAPGGK+T IA + +EG V+++D +KV
Sbjct: 231 GDVSIQDESSMLVARALGPEAGETILDACAAPGGKSTHIAERMGNEGSVLSLDLHEHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 291 LIKEAANRLGLTIIKPEAMDARKA 314
>gi|172035456|ref|YP_001801957.1| rRNA SAM-dependent methyltransferase [Cyanothece sp. ATCC 51142]
gi|354555546|ref|ZP_08974847.1| sun protein [Cyanothece sp. ATCC 51472]
gi|171696910|gb|ACB49891.1| Fmu, rRNA SAM-dependent methyltransferase [Cyanothece sp. ATCC
51142]
gi|353552605|gb|EHC22000.1| sun protein [Cyanothece sp. ATCC 51472]
Length = 452
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
LP F+ +G +Q+ + + ++ LDPQ GE I+D CAAPGGKTT +A L+ D+G ++A
Sbjct: 235 LPGFH---QGHWTIQDSSAQLVSYLLDPQPGETIIDACAAPGGKTTHMAELMGDQGTIIA 291
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITT 316
DR+ +++ +Q+ A + L I T
Sbjct: 292 CDRTPSRLKKVQQNAQRLQLNSIQT 316
>gi|242398901|ref|YP_002994325.1| TRNA/rRNA cytosine-C5-methylase, NOL1/NOP2/Sun family, fused to N-
terminal NusB regulator domain [Thermococcus sibiricus
MM 739]
gi|242265294|gb|ACS89976.1| TRNA/rRNA cytosine-C5-methylase, NOL1/NOP2/Sun family, fused to N-
terminal NusB regulator domain [Thermococcus sibiricus
MM 739]
Length = 450
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+L S AH L P+KGER+LD+ AAPG KT +A L+ + GE++AVD S ++
Sbjct: 240 EGYFVIQDLASAYVAHVLSPEKGERVLDLAAAPGSKTFHVAQLMENTGEIIAVDYSLERL 299
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
++ +G+K + D +K
Sbjct: 300 RKMETKMKILGVKNVKLVHADGMK 323
>gi|419823924|ref|ZP_14347457.1| 16S rRNA methyltransferase B [Bacillus atrophaeus C89]
gi|388471961|gb|EIM08751.1| 16S rRNA methyltransferase B [Bacillus atrophaeus C89]
Length = 447
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G++ +Q+ S++ A AL P+ GE ILD CAAPGGK+T IA + +EG V+++D +KV
Sbjct: 231 GDVSIQDESSMLVARALGPEAGETILDACAAPGGKSTHIAERMGNEGSVLSLDLHEHKVK 290
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +DA KA
Sbjct: 291 LIKEAANRLGLTIIKPEAMDARKA 314
>gi|229031495|ref|ZP_04187495.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH1271]
gi|228729784|gb|EEL80764.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH1271]
Length = 402
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A ALDP +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 185 KGFLSIQDESSMLVARALDPNEGDVVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 244
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 245 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 280
>gi|434376969|ref|YP_006611613.1| 16S rRNA methyltransferase B [Bacillus thuringiensis HD-789]
gi|401875526|gb|AFQ27693.1| 16S rRNA methyltransferase B [Bacillus thuringiensis HD-789]
Length = 444
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +GE +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNEGETVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLENVETKALDARKVQEHFSNETFDK 322
>gi|228902369|ref|ZP_04066525.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis IBL 4222]
gi|228857267|gb|EEN01771.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis IBL 4222]
Length = 429
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +GE +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 212 KGFLSIQDESSMLVARALEPNEGETVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 271
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 272 RLIKQQAERLGLENVETKALDARKVQEHFSNETFDK 307
>gi|228966815|ref|ZP_04127859.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228792914|gb|EEM40472.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar sotto str. T04001]
Length = 429
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +GE +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 212 KGFLSIQDESSMLVARALEPNEGETVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 271
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 272 RLIKQQAERLGLENVETKALDARKVQEHFSNETFDK 307
>gi|423518555|ref|ZP_17495036.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuA2-4]
gi|401160763|gb|EJQ68138.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuA2-4]
Length = 444
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P KG+ +LD CAAPGGKTT IA L G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNKGDTVLDSCAAPGGKTTHIAERLDGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NES D+
Sbjct: 287 RLIEQQAKRLGLENVETMALDARKVQEHFANESFDK 322
>gi|218899018|ref|YP_002447429.1| sun protein [Bacillus cereus G9842]
gi|402564793|ref|YP_006607517.1| 16S rRNA methyltransferase B [Bacillus thuringiensis HD-771]
gi|423359099|ref|ZP_17336602.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD022]
gi|423561729|ref|ZP_17538005.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MSX-A1]
gi|218546015|gb|ACK98409.1| sun protein [Bacillus cereus G9842]
gi|401084971|gb|EJP93217.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD022]
gi|401201986|gb|EJR08851.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MSX-A1]
gi|401793445|gb|AFQ19484.1| 16S rRNA methyltransferase B [Bacillus thuringiensis HD-771]
Length = 444
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +GE +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNEGETVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLENVETKALDARKVQEHFSNETFDK 322
>gi|123968018|ref|YP_001008876.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. AS9601]
gi|123198128|gb|ABM69769.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. AS9601]
Length = 438
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 218 SEGIAVDMHNR-IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
+ GI + + R I LP + D G +Q+ S A L+P++GE+ILD CAAPG K+
Sbjct: 215 NNGITLKSNPRSIKNLPGYSD---GLWTIQDRSSQWIAPLLNPKEGEKILDACAAPGSKS 271
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325
T +A L D E++AVDRS ++ +Q + LK + T K DA + +
Sbjct: 272 THLAELTNDSAEIIAVDRSAKRLKILQSNLERLNLKSVNTLKADATRLI 320
>gi|335429783|ref|ZP_08556681.1| 16S rRNA methyltransferase B [Haloplasma contractile SSD-17B]
gi|334889793|gb|EGM28078.1| 16S rRNA methyltransferase B [Haloplasma contractile SSD-17B]
Length = 439
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A LDP + + +LD CAAPGGKTT IA L+ + G V A D +K+
Sbjct: 227 DGYLTIQDFSSMLVAKILDPSESDDVLDTCAAPGGKTTHIAELMSNSGSVSACDIYDHKI 286
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
I + +GLK I TYK DA
Sbjct: 287 KLIDEHVDRLGLKQIKTYKQDA 308
>gi|392957476|ref|ZP_10322999.1| 16S rRNA methyltransferase B [Bacillus macauensis ZFHKF-1]
gi|391876439|gb|EIT85036.1| 16S rRNA methyltransferase B [Bacillus macauensis ZFHKF-1]
Length = 457
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 54/85 (63%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A L P++ E ILD CAAPGGKTT IA LL + G VVA+D +KV
Sbjct: 230 QGYVTIQDESSMLVARGLGPKESETILDACAAPGGKTTHIAELLNNSGSVVALDLHKHKV 289
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
I++ A + L I T +D+ KA
Sbjct: 290 KLIEEQAKRLHLTNIETKAMDSRKA 314
>gi|228909690|ref|ZP_04073513.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis IBL 200]
gi|228849979|gb|EEM94810.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis IBL 200]
Length = 429
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +GE +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 212 KGFLSIQDESSMLVARALEPNEGEAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 271
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 272 RLIKQQAERLGLENVETKALDARKVQEHFSNETFDK 307
>gi|163941603|ref|YP_001646487.1| sun protein [Bacillus weihenstephanensis KBAB4]
gi|423489041|ref|ZP_17465723.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BtB2-4]
gi|423494766|ref|ZP_17471410.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
CER057]
gi|423498442|ref|ZP_17475059.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
CER074]
gi|423592139|ref|ZP_17568170.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD048]
gi|423598824|ref|ZP_17574824.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD078]
gi|423661295|ref|ZP_17636464.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VDM022]
gi|423669439|ref|ZP_17644468.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VDM034]
gi|423674382|ref|ZP_17649321.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VDM062]
gi|163863800|gb|ABY44859.1| sun protein [Bacillus weihenstephanensis KBAB4]
gi|401150859|gb|EJQ58311.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
CER057]
gi|401160491|gb|EJQ67869.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
CER074]
gi|401232272|gb|EJR38774.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD048]
gi|401237094|gb|EJR43551.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD078]
gi|401298566|gb|EJS04166.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VDM034]
gi|401301336|gb|EJS06925.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VDM022]
gi|401309933|gb|EJS15266.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VDM062]
gi|402432289|gb|EJV64348.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BtB2-4]
Length = 444
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P KG+ +LD CAAPGGKTT IA L G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNKGDTVLDSCAAPGGKTTHIAERLDGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NES D+
Sbjct: 287 RLIEQQAKRLGLENVETMALDARKVQEHFANESFDK 322
>gi|229013049|ref|ZP_04170214.1| Ribosomal RNA small subunit methyltransferase B [Bacillus mycoides
DSM 2048]
gi|228748303|gb|EEL98163.1| Ribosomal RNA small subunit methyltransferase B [Bacillus mycoides
DSM 2048]
Length = 415
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P KG+ +LD CAAPGGKTT IA L G+V+++D +KV
Sbjct: 198 KGFLSIQDESSMLVARALEPNKGDTVLDSCAAPGGKTTHIAERLDGTGKVMSLDLHAHKV 257
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NES D+
Sbjct: 258 RLIEQQAKRLGLENVETMALDARKVQEHFANESFDK 293
>gi|75762655|ref|ZP_00742497.1| 16S rRNA m(5)C 967 methyltransferase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74489854|gb|EAO53228.1| 16S rRNA m(5)C 967 methyltransferase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 368
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +GE +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 151 KGFLSIQDESSMLVARALEPNEGETVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 210
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 211 RLIKQQAERLGLENVETKALDARKVQEHFSNETFDK 246
>gi|425454955|ref|ZP_18834680.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9807]
gi|389804235|emb|CCI16917.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9807]
Length = 446
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 11/123 (8%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G LQ++ + + + LDPQ GE I+D CAAPGGKTT IA L+ D G ++A D++ +++
Sbjct: 234 GNYTLQDISAQLVTYLLDPQPGETIIDACAAPGGKTTHIAELMGDRGRILACDQTASRLR 293
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEV 360
++ + LK I + D S D P C D I + S LHK +
Sbjct: 294 QLEANIKRLDLKAIEIHLGD----------SRDRPQWCGIADRVLIDAPCSGLGTLHK-L 342
Query: 361 PSI 363
P I
Sbjct: 343 PDI 345
>gi|229061468|ref|ZP_04198813.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH603]
gi|229134673|ref|ZP_04263482.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BDRD-ST196]
gi|229168605|ref|ZP_04296328.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH621]
gi|228615011|gb|EEK72113.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH621]
gi|228648719|gb|EEL04745.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BDRD-ST196]
gi|228717891|gb|EEL69539.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH603]
Length = 415
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P KG+ +LD CAAPGGKTT IA L G+V+++D +KV
Sbjct: 198 KGFLSIQDESSMLVARALEPNKGDTVLDSCAAPGGKTTHIAERLDGTGKVMSLDLHAHKV 257
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NES D+
Sbjct: 258 RLIEQQAKRLGLENVETMALDARKVQEHFANESFDK 293
>gi|157412841|ref|YP_001483707.1| Sun protein [Prochlorococcus marinus str. MIT 9215]
gi|157387416|gb|ABV50121.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. MIT 9215]
Length = 438
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 221 IAVDMHN---------RIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAA 271
I D+HN I LP + D G +Q+ S A L+P++GE+ILD CAA
Sbjct: 210 IIKDLHNGITLKSNPRSIKNLPGYSD---GLWTIQDRSSQWIAPLLNPKEGEKILDACAA 266
Query: 272 PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
PG K+T +A L D E++AVDRS ++ +Q + LK + T K DA
Sbjct: 267 PGSKSTHLAELTNDSAEILAVDRSEKRLKILQSNLVRLNLKSVNTLKADA 316
>gi|423612082|ref|ZP_17587943.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD107]
gi|401247089|gb|EJR53433.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD107]
Length = 444
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P KG+ +LD CAAPGGKTT IA L G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNKGDAVLDSCAAPGGKTTHIAERLDGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NES D+
Sbjct: 287 RLIEQQAKRLGLENVETMALDARKVQEHFANESFDK 322
>gi|423558572|ref|ZP_17534874.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MC67]
gi|401191840|gb|EJQ98862.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MC67]
Length = 444
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P KG+ +LD CAAPGGKTT IA L G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNKGDAVLDSCAAPGGKTTHIAERLDGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NES D+
Sbjct: 287 RLIEQQAKRLGLENVETMALDARKVQEHFANESFDK 322
>gi|425468533|ref|ZP_18847544.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9701]
gi|389884794|emb|CCI34927.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9701]
Length = 450
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G LQ++ + + + LDPQ GE I+D CAAPGGKTT IA L+ D G+++A D++ +++
Sbjct: 234 GNYTLQDISAQLVTYLLDPQPGETIIDACAAPGGKTTHIAELMGDRGKILACDQTASRLR 293
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK 358
++ + LK I + D S D P C D I + S LHK
Sbjct: 294 QLEANIKRLDLKAIEIHLGD----------SRDRPQWCGIADRVLIDAPCSGLGTLHK 341
>gi|423367909|ref|ZP_17345341.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD142]
gi|423470079|ref|ZP_17446823.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG6O-2]
gi|401082770|gb|EJP91035.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD142]
gi|402437331|gb|EJV69355.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG6O-2]
Length = 444
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P KG+ +LD CAAPGGKTT IA L G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNKGDAVLDSCAAPGGKTTHIAERLDGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NES D+
Sbjct: 287 RLIEQQAKRLGLENVETMALDARKVQEHFANESFDK 322
>gi|434398098|ref|YP_007132102.1| sun protein [Stanieria cyanosphaera PCC 7437]
gi|428269195|gb|AFZ35136.1| sun protein [Stanieria cyanosphaera PCC 7437]
Length = 453
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 228 RIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEG 287
+I QLP + G +Q+ + + H LDPQ GE I+D CAAPGGKTT IA L++D+G
Sbjct: 228 KINQLPGYE---AGWWMVQDSSAQLVTHLLDPQPGETIVDACAAPGGKTTHIAELIKDQG 284
Query: 288 EVVAVDRSHNKVMDIQKLAAEMGLKCI 314
+ A D S ++ +Q+ A + LK I
Sbjct: 285 VIYACDLSEKRLNKVQENAQRLQLKSI 311
>gi|423522305|ref|ZP_17498778.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuA4-10]
gi|401174999|gb|EJQ82202.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuA4-10]
Length = 444
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P KG+ +LD CAAPGGKTT IA L G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNKGDAVLDSCAAPGGKTTHIAERLDGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NES D+
Sbjct: 287 RLIEQQAKRLGLENVETMALDARKVQEHFANESFDK 322
>gi|425445544|ref|ZP_18825572.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9443]
gi|389734455|emb|CCI01900.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9443]
Length = 446
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G LQ++ + + + LDPQ GE I+D CAAPGGKTT IA L+ D G ++A D++ +++
Sbjct: 234 GNYTLQDISAQLVTYLLDPQPGETIIDACAAPGGKTTHIAELMGDRGRILACDQTASRLR 293
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK 358
++ + LK I + D S D P C D I + S LHK
Sbjct: 294 QLEANIKRLDLKAIEIHLGD----------SRDRPQWCGIADRVLIDAPCSGLGTLHK 341
>gi|126695788|ref|YP_001090674.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. MIT 9301]
gi|126542831|gb|ABO17073.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. MIT 9301]
Length = 438
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 221 IAVDMHN---------RIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAA 271
I D+HN I LP + D G +Q+ S A L+P++GE+ILD CAA
Sbjct: 210 IIKDLHNGITLKSNPRSIKNLPGYSD---GLWTIQDRSSQWIAPLLNPKQGEKILDACAA 266
Query: 272 PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
PG K+T +A L D E++AVDRS ++ +Q + LK + T K DA
Sbjct: 267 PGSKSTHLAELTNDSSEIIAVDRSAKRLKILQSNLERLNLKSVNTLKADA 316
>gi|390440194|ref|ZP_10228542.1| Ribosomal RNA small subunit methyltransferase B [Microcystis sp.
T1-4]
gi|389836395|emb|CCI32668.1| Ribosomal RNA small subunit methyltransferase B [Microcystis sp.
T1-4]
Length = 446
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G LQ++ + + + LDPQ GE I+D CAAPGGKTT IA L+ D G ++A D++ +++
Sbjct: 234 GNYTLQDISAQLVTYLLDPQPGETIIDACAAPGGKTTHIAELMGDRGRILACDQTASRLR 293
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK 358
++ + LK I + D S D P C D I + S LHK
Sbjct: 294 QLEANIKRLDLKAIEIHLGD----------SRDRPQWCGIADRVLIDAPCSGLGTLHK 341
>gi|423483455|ref|ZP_17460145.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG6X1-2]
gi|401141006|gb|EJQ48561.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG6X1-2]
Length = 444
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ A AL+P KG+ +LD CAAPGGKTT IA L G+V+++D +KV
Sbjct: 228 GFLSIQDESSMLVARALEPNKGDAVLDSCAAPGGKTTHIAERLDGTGKVMSLDLHAHKVR 287
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NES D+
Sbjct: 288 LIEQQAKRLGLENVETMALDARKVQEHFANESFDK 322
>gi|443310715|ref|ZP_21040357.1| ribosomal RNA small subunit methyltransferase RsmB [Synechocystis
sp. PCC 7509]
gi|442779240|gb|ELR89491.1| ribosomal RNA small subunit methyltransferase RsmB [Synechocystis
sp. PCC 7509]
Length = 446
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I LP F D G +Q+ + + +H LDPQ GE I+D CAAPGGKTT IA L+ D+G
Sbjct: 225 IQNLPGFND---GWWTVQDSSAQLVSHLLDPQSGEFIIDACAAPGGKTTHIAELMGDQGT 281
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCI 314
+ A DR+ +++ +Q+ + LK I
Sbjct: 282 IWACDRTASRLRKLQQNTKRLQLKSI 307
>gi|425464664|ref|ZP_18843974.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9809]
gi|389833279|emb|CCI22350.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9809]
Length = 450
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G LQ++ + + + LDPQ GE I+D CAAPGGKTT IA L+ D G ++A D++ +++
Sbjct: 234 GNYTLQDISAQLVTYLLDPQPGETIIDACAAPGGKTTHIAELMGDRGRILACDQTASRLR 293
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK 358
++ + LK I + D S D P C D I + S LHK
Sbjct: 294 QLEANIKRLDLKAIEIHLGD----------SRDRPQWCGIADRVLIDAPCSGLGTLHK 341
>gi|78778810|ref|YP_396922.1| sun protein [Prochlorococcus marinus str. MIT 9312]
gi|78712309|gb|ABB49486.1| sun protein [Prochlorococcus marinus str. MIT 9312]
Length = 438
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 221 IAVDMHN---------RIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAA 271
I D+HN I LP + D G +Q+ S A L+P++GE+ILD CAA
Sbjct: 210 IIKDLHNGITLKSNPRSIKNLPGYSD---GLWTIQDRSSQWIAPLLNPKEGEKILDACAA 266
Query: 272 PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
PG K+T +A L D E++AVDRS ++ +Q + LK + T K DA
Sbjct: 267 PGSKSTHLAELTNDSAEIIAVDRSAKRLKILQSNLERLNLKSVNTLKADA 316
>gi|434391954|ref|YP_007126901.1| sun protein [Gloeocapsa sp. PCC 7428]
gi|428263795|gb|AFZ29741.1| sun protein [Gloeocapsa sp. PCC 7428]
Length = 446
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 23/163 (14%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I +LP F G +Q+ + + +H LDPQ GE ++D CAAPGGKTT IA L++D G
Sbjct: 224 IEKLPGFD---AGWWTVQDSSAQLVSHILDPQPGEVVIDACAAPGGKTTHIAELMQDTGT 280
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITS 348
+ A DR+ +++ +Q+ A + LK I D S + P+ N D + +
Sbjct: 281 IWACDRTVSRLKKLQQNIARLQLKSIQICPGD----------SRNLPHFVNIADRVLLDA 330
Query: 349 QTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEI 391
S LH+ + D ++ T E + Q E+
Sbjct: 331 PCSGLGTLHR----------HADARWRQTPETVKELTVLQTEL 363
>gi|269797911|ref|YP_003311811.1| sun protein [Veillonella parvula DSM 2008]
gi|269094540|gb|ACZ24531.1| sun protein [Veillonella parvula DSM 2008]
Length = 451
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%)
Query: 238 VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297
VL+G I + S++ AH +DPQ GERILD CAAPGGK+ +ASL+ + G +++ D +
Sbjct: 238 VLDGHITFMDKASMLVAHVVDPQPGERILDCCAAPGGKSMHMASLMNNTGAIMSCDIYDH 297
Query: 298 KVMDIQKLAAEMGLKCITT 316
K+ I + A +G+ I+T
Sbjct: 298 KLELINQNAERLGVSIIST 316
>gi|389852328|ref|YP_006354562.1| nol1-nop2-sun family nucleolar protein II [Pyrococcus sp. ST04]
gi|388249634|gb|AFK22487.1| nol1-nop2-sun family nucleolar protein II [Pyrococcus sp. ST04]
Length = 432
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 52/75 (69%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +Q+L S AH L P+ G+R+LD+ AAPG KT A+L+ ++GE+VAVD S++++
Sbjct: 223 KGYFVIQDLASAYVAHVLSPEPGDRVLDLAAAPGSKTFHAAALMENKGEIVAVDYSYDRL 282
Query: 300 MDIQKLAAEMGLKCI 314
M +++ +G+K +
Sbjct: 283 MKMKERMKRLGVKNV 297
>gi|440755727|ref|ZP_20934929.1| ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa TAIHU98]
gi|440175933|gb|ELP55302.1| ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa TAIHU98]
Length = 450
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G LQ++ + + + LDPQ GE I+D CAAPGGKTT IA L+ D G ++A D++ +++
Sbjct: 234 GNYTLQDISAQLVTYLLDPQPGETIIDACAAPGGKTTHIAELMGDRGRILACDQTPSRLR 293
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK 358
++ + LK I + D S D P C D I + S LHK
Sbjct: 294 QLEANIKRLDLKAIEIHLGD----------SRDRPQWCGIADRVLIDAPCSGLGTLHK 341
>gi|425460298|ref|ZP_18839779.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9808]
gi|389827038|emb|CCI22011.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9808]
Length = 446
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G LQ++ + + + LDPQ GE I+D CAAPGGKTT IA L+ D G ++A D++ +++
Sbjct: 234 GNYTLQDISAQLVTYLLDPQPGETIIDACAAPGGKTTHIAELMGDRGRILACDQTPSRLR 293
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK 358
++ + LK I + D S D P C D I + S LHK
Sbjct: 294 QLEANIKRLDLKAIEIHLGD----------SRDRPQWCGIADRVLIDAPCSGLGTLHK 341
>gi|410460745|ref|ZP_11314418.1| 16S rRNA methyltransferase B [Bacillus azotoformans LMG 9581]
gi|409926675|gb|EKN63831.1| 16S rRNA methyltransferase B [Bacillus azotoformans LMG 9581]
Length = 446
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 55/82 (67%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG + +Q+ S++ A AL PQKG+++LD CAAPGGKTT IA LL ++G+V++VD +KV
Sbjct: 229 EGYVTIQDESSMLVARALGPQKGDKVLDSCAAPGGKTTHIAELLGNDGKVISVDLHPHKV 288
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
I++ + L + T D+
Sbjct: 289 KLIEEQVKRLKLTNVETLVSDS 310
>gi|423401293|ref|ZP_17378466.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG2X1-2]
gi|423457952|ref|ZP_17434749.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG5X2-1]
gi|423478003|ref|ZP_17454718.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG6X1-1]
gi|401148336|gb|EJQ55829.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG5X2-1]
gi|401654283|gb|EJS71826.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG2X1-2]
gi|402428165|gb|EJV60262.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG6X1-1]
Length = 444
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNEGDEVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ A +GL+ + T LDA K
Sbjct: 287 RLIKQQAERLGLENVETKALDARK 310
>gi|423452834|ref|ZP_17429687.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG5X1-1]
gi|401139393|gb|EJQ46955.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG5X1-1]
Length = 444
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P KG+ +LD CAAPGGKTT IA L G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNKGDAVLDSCAAPGGKTTHIAERLDGTGKVMSLDLHVHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NES D+
Sbjct: 287 RLIEQQAKRLGLENVETMALDARKVQEHFANESFDK 322
>gi|229174531|ref|ZP_04302063.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MM3]
gi|228609091|gb|EEK66381.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MM3]
Length = 402
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 185 KGFLSIQDESSMLVARALEPNEGDEVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 244
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 245 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 280
>gi|357012410|ref|ZP_09077409.1| 16S rRNA methyltransferase B [Paenibacillus elgii B69]
Length = 494
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
D G +Q+ S++ A +DPQ GER+LD CAAPGGKTT +A + D GE+VA D
Sbjct: 275 DYAAGLYSVQDESSMLVAEWVDPQPGERVLDCCAAPGGKTTHLAEKMGDRGEIVACDVHE 334
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDALK 323
+K I++ A + L+ I T DA +
Sbjct: 335 HKRKLIEEQAERLALRSIRTLTADARR 361
>gi|229025307|ref|ZP_04181726.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH1272]
gi|228735998|gb|EEL86574.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH1272]
Length = 387
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 170 KGFLSIQDESSMLVARALEPNEGDEVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 229
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K +NE+ D+
Sbjct: 230 RLIRQQADRLGLENVETKALDARKVQEHFENETFDK 265
>gi|229019063|ref|ZP_04175901.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH1273]
gi|228742231|gb|EEL92393.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH1273]
Length = 369
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 152 KGFLSIQDESSMLVARALEPNEGDEVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 211
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K +NE+ D+
Sbjct: 212 RLIRQQADRLGLENVETKALDARKVQEHFENETFDK 247
>gi|116073315|ref|ZP_01470577.1| Fmu, rRNA SAM-dependent methyltransferase [Synechococcus sp.
RS9916]
gi|116068620|gb|EAU74372.1| Fmu, rRNA SAM-dependent methyltransferase [Synechococcus sp.
RS9916]
Length = 456
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 207 AMMSRAGIFRASEGIAVDMHN-RIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERI 265
A ++ I +G+ V H + Q P + D G +Q+ + A L PQ G+R+
Sbjct: 222 AGLTVVAIPECPDGLQVLSHGGDLRQWPGYDD---GHWCVQDRAAQWVAPLLAPQPGDRV 278
Query: 266 LDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
LD CAAPGGK T +A L+ D+GEV A+DRS ++ + AA +G C+
Sbjct: 279 LDACAAPGGKATHLAELMGDQGEVWAIDRSAGRLQRVAANAARLGTNCL 327
>gi|423389828|ref|ZP_17367054.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG1X1-3]
gi|423418228|ref|ZP_17395317.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG3X2-1]
gi|401106501|gb|EJQ14462.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG3X2-1]
gi|401641919|gb|EJS59636.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG1X1-3]
Length = 444
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNEGDEVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K +NE+ D+
Sbjct: 287 RLIRQQADRLGLENVETKALDARKVQEHFENETFDK 322
>gi|332710036|ref|ZP_08429991.1| ribosomal RNA small subunit methyltransferase RsmB [Moorea
producens 3L]
gi|332351179|gb|EGJ30764.1| ribosomal RNA small subunit methyltransferase RsmB [Moorea
producens 3L]
Length = 477
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 13/130 (10%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I +LP F EG +Q+ + + ++ LDPQ G+ ++D CAAPGGKTT IA L+ D+G+
Sbjct: 257 IQELPGFK---EGWWTVQDCSAQLVSYLLDPQPGDVVIDACAAPGGKTTHIAELMADQGK 313
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITS 348
+ A DRS +++ +Q+ A + L+ I D S D P N + + +
Sbjct: 314 IWACDRSASRLKKVQQNAQRLELQSIQISTGD----------SRDCPEFTNVANAVLLDA 363
Query: 349 QTSDSMKLHK 358
S + LH+
Sbjct: 364 PCSGNGTLHR 373
>gi|254526482|ref|ZP_05138534.1| ribosomal RNA small subunit methyltransferase B [Prochlorococcus
marinus str. MIT 9202]
gi|221537906|gb|EEE40359.1| ribosomal RNA small subunit methyltransferase B [Prochlorococcus
marinus str. MIT 9202]
Length = 438
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 221 IAVDMHN---------RIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAA 271
I D+HN I LP + D G +Q+ S A L+P++GE+ILD CAA
Sbjct: 210 IIKDLHNGITLKSNPRSIKNLPGYSD---GLWTIQDRSSQWIAPLLNPKEGEKILDACAA 266
Query: 272 PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
PG K+T +A L D E++AVDRS ++ +Q + LK + T K DA
Sbjct: 267 PGSKSTHLAELTNDSAEILAVDRSAKRLKILQSNLERLNLKSVNTLKTDA 316
>gi|260887300|ref|ZP_05898563.1| ribosomal RNA small subunit methyltransferase B [Selenomonas
sputigena ATCC 35185]
gi|330838946|ref|YP_004413526.1| sun protein [Selenomonas sputigena ATCC 35185]
gi|260862936|gb|EEX77436.1| ribosomal RNA small subunit methyltransferase B [Selenomonas
sputigena ATCC 35185]
gi|329746710|gb|AEC00067.1| sun protein [Selenomonas sputigena ATCC 35185]
Length = 443
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
EGI H + L S +G +Q+ S++ AH L P+ GE +LD+C+APGGKTT
Sbjct: 214 EGILFLRHGSLDALESLQ---QGLFQVQDESSMLVAHVLAPEPGEFVLDVCSAPGGKTTH 270
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR 327
IA+ + D G +VA+D +K+ I + +G+K + LDA +A RR
Sbjct: 271 IAASMGDCGRIVALDVHEHKMRRIAENCERLGIKSVEPLLLDAREAGRR 319
>gi|86605784|ref|YP_474547.1| ribosomal RNA small subunit methyltransferase B [Synechococcus sp.
JA-3-3Ab]
gi|86554326|gb|ABC99284.1| ribosomal RNA small subunit methyltransferase B [Synechococcus sp.
JA-3-3Ab]
Length = 448
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I LP F +G +Q+ + H LDPQ GER++D CAAPGGKTT +A ++D GE
Sbjct: 232 ITALPGFA---QGWWSVQDASAQQVVHYLDPQPGERVIDCCAAPGGKTTHMAEQMQDRGE 288
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322
+ A+DR +++ +++ +GL I +D L
Sbjct: 289 IWALDRHPHRLRRLEENVQRLGLSSIRPLAIDLL 322
>gi|424811862|ref|ZP_18237102.1| tRNA and rRNA cytosine-C5-methylase [Candidatus Nanosalinarum sp.
J07AB56]
gi|339756084|gb|EGQ39667.1| tRNA and rRNA cytosine-C5-methylase [Candidatus Nanosalinarum sp.
J07AB56]
Length = 264
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Query: 224 DMHNRIFQLP------SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
D + R+F+LP + Y GE ++Q + V L+PQ GE +LD+CAAPGGKT+
Sbjct: 27 DWNPRVFRLPEAEKPGNTYMHWRGEYYVQEESAAVPVDILNPQPGESVLDLCAAPGGKTS 86
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318
IA+ + GE+VA D S N++ +Q + G TT +
Sbjct: 87 QIAARTGNRGELVANDSSRNRLSSLQVNSYRTGAAAATTCR 127
>gi|375082408|ref|ZP_09729468.1| tRNA/RNA cytosine-C5-methylase [Thermococcus litoralis DSM 5473]
gi|374742901|gb|EHR79279.1| tRNA/RNA cytosine-C5-methylase [Thermococcus litoralis DSM 5473]
Length = 450
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 6/87 (6%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+L S AH L P+KGER+LD+ AAPG KT +A L+ + G++VAVD S +
Sbjct: 240 EGYFVIQDLASAYVAHVLAPEKGERVLDLAAAPGSKTFHVAHLMENTGKIVAVDYSAER- 298
Query: 300 MDIQKLAAEM---GLKCITTYKLDALK 323
+QK+ A+M G+K + D +K
Sbjct: 299 --LQKMKAKMKVLGVKNVKLVHADGMK 323
>gi|411120538|ref|ZP_11392910.1| ribosomal RNA small subunit methyltransferase RsmB [Oscillatoriales
cyanobacterium JSC-12]
gi|410709207|gb|EKQ66722.1| ribosomal RNA small subunit methyltransferase RsmB [Oscillatoriales
cyanobacterium JSC-12]
Length = 451
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 228 RIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEG 287
RI LP F D G +Q+ + + ++ LDPQ GE ++D CAAPGGKTT IA L+ D+G
Sbjct: 225 RIQDLPGFQD---GWWVVQDCSAQLVSYLLDPQPGEVVIDACAAPGGKTTHIAELMNDQG 281
Query: 288 EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDE 334
V A D++ +++ +++ + L+ I + D+ + + R N+ D
Sbjct: 282 TVWACDKTSSRLKKLEQNCDRLQLQSIRIHHGDS-RVLPRFNQPADR 327
>gi|427731853|ref|YP_007078090.1| ribosomal RNA small subunit methyltransferase RsmB [Nostoc sp. PCC
7524]
gi|427367772|gb|AFY50493.1| ribosomal RNA small subunit methyltransferase RsmB [Nostoc sp. PCC
7524]
Length = 449
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I LP F +G +Q+ + + +H LDPQ GE ++D CAAPGGKTT +A L+ D+G+
Sbjct: 225 IKNLPGFS---QGWWVVQDASAQLVSHFLDPQPGEVVVDACAAPGGKTTHMAELMEDQGK 281
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCI 314
+ A DR+ +++ +++ A +GL I
Sbjct: 282 IWACDRTASRLRKLKENAQRLGLHSI 307
>gi|254735904|ref|ZP_05193610.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. Western North America USA6153]
Length = 444
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ ILD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 322
>gi|169831743|ref|YP_001717725.1| sun protein [Candidatus Desulforudis audaxviator MP104C]
gi|169638587|gb|ACA60093.1| sun protein [Candidatus Desulforudis audaxviator MP104C]
Length = 452
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
A EG+ + + LPSF +G +Q+ S++ AHA++P +G RILD C+APGGKT
Sbjct: 214 APEGLEIGGFVSMRALPSFQ---QGLFQIQDESSMLVAHAVNPARGVRILDACSAPGGKT 270
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
T +A L+ +EG + A+D +K+ + +G+ + T LDA
Sbjct: 271 THLAQLMENEGIIKALDIHQHKLKLVSDNCRRLGIDNVETELLDA 315
>gi|196038686|ref|ZP_03105994.1| sun protein [Bacillus cereus NVH0597-99]
gi|196030409|gb|EDX69008.1| sun protein [Bacillus cereus NVH0597-99]
Length = 444
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ ILD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 322
>gi|30263868|ref|NP_846245.1| sun protein [Bacillus anthracis str. Ames]
gi|47529294|ref|YP_020643.1| sun protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49186715|ref|YP_029967.1| sun protein [Bacillus anthracis str. Sterne]
gi|49478421|ref|YP_037926.1| sun protein [Bacillus thuringiensis serovar konkukian str. 97-27]
gi|118479087|ref|YP_896238.1| sun protein [Bacillus thuringiensis str. Al Hakam]
gi|165872297|ref|ZP_02216934.1| sun protein [Bacillus anthracis str. A0488]
gi|167636414|ref|ZP_02394713.1| sun protein [Bacillus anthracis str. A0442]
gi|167641141|ref|ZP_02399396.1| sun protein [Bacillus anthracis str. A0193]
gi|170688847|ref|ZP_02880050.1| sun protein [Bacillus anthracis str. A0465]
gi|170708813|ref|ZP_02899249.1| sun protein [Bacillus anthracis str. A0389]
gi|177654922|ref|ZP_02936639.1| sun protein [Bacillus anthracis str. A0174]
gi|190565749|ref|ZP_03018668.1| sun protein [Bacillus anthracis str. Tsiankovskii-I]
gi|196035830|ref|ZP_03103232.1| sun protein [Bacillus cereus W]
gi|196047441|ref|ZP_03114653.1| sun protein [Bacillus cereus 03BB108]
gi|218904995|ref|YP_002452829.1| sun protein [Bacillus cereus AH820]
gi|227813227|ref|YP_002813236.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. CDC 684]
gi|229603771|ref|YP_002868102.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. A0248]
gi|254683426|ref|ZP_05147286.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. CNEVA-9066]
gi|254721397|ref|ZP_05183186.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. A1055]
gi|254739848|ref|ZP_05197541.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. Kruger B]
gi|254751038|ref|ZP_05203077.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. Vollum]
gi|254756703|ref|ZP_05208732.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. Australia 94]
gi|301055356|ref|YP_003793567.1| sun protein [Bacillus cereus biovar anthracis str. CI]
gi|376267761|ref|YP_005120473.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
F837/76]
gi|386737687|ref|YP_006210868.1| Sun protein [Bacillus anthracis str. H9401]
gi|421507405|ref|ZP_15954325.1| 16S rRNA methyltransferase B [Bacillus anthracis str. UR-1]
gi|421639620|ref|ZP_16080211.1| 16S rRNA methyltransferase B [Bacillus anthracis str. BF1]
gi|423550386|ref|ZP_17526713.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
ISP3191]
gi|30258512|gb|AAP27731.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. Ames]
gi|47504442|gb|AAT33118.1| sun protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49180642|gb|AAT56018.1| sun protein [Bacillus anthracis str. Sterne]
gi|49329977|gb|AAT60623.1| sun protein [Bacillus thuringiensis serovar konkukian str. 97-27]
gi|118418312|gb|ABK86731.1| sun protein [Bacillus thuringiensis str. Al Hakam]
gi|164711973|gb|EDR17513.1| sun protein [Bacillus anthracis str. A0488]
gi|167510921|gb|EDR86312.1| sun protein [Bacillus anthracis str. A0193]
gi|167528156|gb|EDR90943.1| sun protein [Bacillus anthracis str. A0442]
gi|170126298|gb|EDS95189.1| sun protein [Bacillus anthracis str. A0389]
gi|170667202|gb|EDT17962.1| sun protein [Bacillus anthracis str. A0465]
gi|172080433|gb|EDT65520.1| sun protein [Bacillus anthracis str. A0174]
gi|190562668|gb|EDV16634.1| sun protein [Bacillus anthracis str. Tsiankovskii-I]
gi|195991479|gb|EDX55445.1| sun protein [Bacillus cereus W]
gi|196021749|gb|EDX60444.1| sun protein [Bacillus cereus 03BB108]
gi|218535394|gb|ACK87792.1| sun protein [Bacillus cereus AH820]
gi|227005311|gb|ACP15054.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. CDC 684]
gi|229268179|gb|ACQ49816.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. A0248]
gi|300377525|gb|ADK06429.1| sun protein [Bacillus cereus biovar anthracis str. CI]
gi|364513561|gb|AEW56960.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
F837/76]
gi|384387539|gb|AFH85200.1| Sun protein [Bacillus anthracis str. H9401]
gi|401190002|gb|EJQ97052.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
ISP3191]
gi|401822539|gb|EJT21689.1| 16S rRNA methyltransferase B [Bacillus anthracis str. UR-1]
gi|403393285|gb|EJY90530.1| 16S rRNA methyltransferase B [Bacillus anthracis str. BF1]
Length = 444
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ ILD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 322
>gi|440803888|gb|ELR24771.1| NOL1/NOP2/sun family putative RNA methylase subfamily protein
[Acanthamoeba castellanii str. Neff]
Length = 689
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
L G+ LQ+ S + ALDPQ GER+LDMCAAPGGKTT IA ++++ G + + D+ +
Sbjct: 370 LTGQYMLQSASSFIPVLALDPQPGERVLDMCAAPGGKTTYIAQMMKNTGVLFSNDKHSER 429
Query: 299 VMDIQKLAAEMGLK--CITTY 317
V + MG++ IT Y
Sbjct: 430 VRAVVANVHRMGIRNTVITNY 450
>gi|402815959|ref|ZP_10865551.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus
alvei DSM 29]
gi|402506999|gb|EJW17522.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus
alvei DSM 29]
Length = 465
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GE+ +Q+ S++ AL P+ G R+LD CAAPGGKTT IA + ++GEVVA D +KV
Sbjct: 243 GELSVQDESSMLVVEALRPEAGMRVLDCCAAPGGKTTHIAERMGNKGEVVANDVHAHKVA 302
Query: 301 DIQKLAAEMGLKCITTYKLDA 321
I A +GL + T +DA
Sbjct: 303 LIADQAERLGLTSVATMNVDA 323
>gi|402574141|ref|YP_006623484.1| NusB antitermination factor [Desulfosporosinus meridiei DSM 13257]
gi|402255338|gb|AFQ45613.1| NusB antitermination factor [Desulfosporosinus meridiei DSM 13257]
Length = 454
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 26/227 (11%)
Query: 196 ERSGLYIGQGTAMMSRAGIFRA--SEGIAVDM------------HNRIFQLPSFYDVLEG 241
E + +I T +SR + SEGI+V++ + QL SF EG
Sbjct: 176 EPAQTWIRTNTLKISREALKERLISEGISVELGLLVPESLKIQDFGALEQLASFQ---EG 232
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMD 301
+Q+ S + AH +DP+ G+ +LD C+APGGK+T +A L++++GE+ A D ++K+
Sbjct: 233 LFTVQDESSQLVAHVVDPKPGQSVLDTCSAPGGKSTHLAQLMQNKGEIQAFDIHNHKLEL 292
Query: 302 IQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK--- 358
I +LA ++G+ I DA + ES D + + + +D ++ K
Sbjct: 293 IGQLATKLGITIIQPQFGDARDLPGIRLESQDRVLVDVPCSGLGVLRRRAD-LRWQKEEQ 351
Query: 359 ---EVPSIAAEGLNGDKSCKEKGRTC--GECGMAQEEINALVVGLRI 400
E+PS+ L SC + G T C + EE LV RI
Sbjct: 352 GLLELPSLQFAILERAASCVKDGGTLVYSTCTIEPEENFELVKKFRI 398
>gi|149173494|ref|ZP_01852124.1| sun protein [Planctomyces maris DSM 8797]
gi|148847676|gb|EDL62009.1| sun protein [Planctomyces maris DSM 8797]
Length = 477
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 10/149 (6%)
Query: 179 ITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFR--ASEGIAV---DMHNRI-FQL 232
+TR +V Q Q ++ +R+ LY+ R + +EGI V D I +
Sbjct: 212 LTRFSVQQTMQMAQWFNQRNNLYLRINALQTGREQLLEELQAEGIQVSPGDEPQAIRLEE 271
Query: 233 PSFYDVL----EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
P + L G+ +Q+ ++ + L+PQ E + DMCAAPG KTT +A L+ + G
Sbjct: 272 PVAMENLVGFSAGKFTIQDQSAMAAGNLLNPQPEETVWDMCAAPGTKTTHLAELMYNRGT 331
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTY 317
++A D S +++ I++ A+ +GL CI T+
Sbjct: 332 LIATDVSCDRLEKIEQNASRLGLTCIETH 360
>gi|418323824|ref|ZP_12935086.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
pettenkoferi VCU012]
gi|365229170|gb|EHM70333.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
pettenkoferi VCU012]
Length = 437
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG I +Q+ S+ AH LDPQ G+ ILD C+APGGK I LLR G+V A D +K+
Sbjct: 229 EGLISIQDKSSMFVAHYLDPQIGDHILDACSAPGGKACHIGELLRGTGQVTATDIHQHKI 288
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
IQ+ ++GL + + DA
Sbjct: 289 ALIQENIHKLGLSHVKAMQHDA 310
>gi|448678053|ref|ZP_21689243.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula argentinensis DSM
12282]
gi|445773728|gb|EMA24761.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula argentinensis DSM
12282]
Length = 303
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 223 VDMHNRIFQLP-----SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
VD H+ +F LP + + G I Q S++ A LDPQ GER+ D CAAPG KTT
Sbjct: 55 VDWHDGLFVLPEDSPGANWPYFHGWIHGQEEVSVIPATVLDPQPGERVWDACAAPGSKTT 114
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
+A+ + D GEVVA D + ++ ++ +G + D
Sbjct: 115 QLAARMEDAGEVVATDNNLGRISALRTNTERLGATTVAVTHED 157
>gi|379012011|ref|YP_005269823.1| ribosomal RNA small subunit methyltransferase B [Acetobacterium
woodii DSM 1030]
gi|375302800|gb|AFA48934.1| ribosomal RNA small subunit methyltransferase B [Acetobacterium
woodii DSM 1030]
Length = 441
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 50/71 (70%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+ +Q+ +++T LDP+ G+R+LDMCAAPGGKTT ++ L+ +EGE++A D +++
Sbjct: 237 EGQFLIQDQAAMITVERLDPKPGQRVLDMCAAPGGKTTYLSQLMNNEGEIIARDVFPHRL 296
Query: 300 MDIQKLAAEMG 310
I++ +G
Sbjct: 297 KLIKQQLRRLG 307
>gi|229092908|ref|ZP_04224042.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus
Rock3-42]
gi|228690530|gb|EEL44313.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus
Rock3-42]
Length = 360
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ ILD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 143 KGFLSIQDESSMLVARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 202
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 203 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 238
>gi|428204437|ref|YP_007083026.1| ribosomal RNA small subunit methyltransferase RsmB [Pleurocapsa sp.
PCC 7327]
gi|427981869|gb|AFY79469.1| ribosomal RNA small subunit methyltransferase RsmB [Pleurocapsa sp.
PCC 7327]
Length = 446
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I QLP F EG +Q+ + + AH LDPQ GE ++D CAAPGGKTT IA L+ D G
Sbjct: 226 IQQLPGFQ---EGWWTVQDSSAQLVAHLLDPQPGEVVIDACAAPGGKTTHIAELMGDRGT 282
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCI 314
+ A DR +++ +Q+ + L+ I
Sbjct: 283 IWACDRVESRLRKLQENIQRLQLQSI 308
>gi|20807946|ref|NP_623117.1| tRNA and rRNA cytosine-C5-methylase [Thermoanaerobacter
tengcongensis MB4]
gi|254479565|ref|ZP_05092880.1| ribosomal RNA small subunit methyltransferase B [Carboxydibrachium
pacificum DSM 12653]
gi|20516516|gb|AAM24721.1| tRNA and rRNA cytosine-C5-methylases [Thermoanaerobacter
tengcongensis MB4]
gi|214034503|gb|EEB75262.1| ribosomal RNA small subunit methyltransferase B [Carboxydibrachium
pacificum DSM 12653]
Length = 443
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 215 FRASEGIAVDMHNRIFQLPSFYDVL-EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPG 273
+ E + +D+ N P + + +G I Q+ S++ + L PQKGERILD+CAAPG
Sbjct: 205 YYLEEALYIDLKN-----PESHPIYKDGLIHPQDEASMLVSRILSPQKGERILDVCAAPG 259
Query: 274 GKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
GKTT I+ ++ + GEVVA D +++ I++ +G+ + T DA
Sbjct: 260 GKTTHISQIMENTGEVVAFDLHPHRLKLIEENCRRLGVTNVKTEVFDA 307
>gi|228916502|ref|ZP_04080068.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228928913|ref|ZP_04091945.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228935179|ref|ZP_04098006.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228947584|ref|ZP_04109874.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229123379|ref|ZP_04252583.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus 95/8201]
gi|229186105|ref|ZP_04313274.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus BGSC
6E1]
gi|228597281|gb|EEK54932.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus BGSC
6E1]
gi|228660155|gb|EEL15791.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus 95/8201]
gi|228812104|gb|EEM58435.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228824544|gb|EEM70349.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228830720|gb|EEM76325.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228843081|gb|EEM88163.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 360
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ ILD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 143 KGFLSIQDESSMLVARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 202
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 203 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 238
>gi|225865846|ref|YP_002751224.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
03BB102]
gi|225787241|gb|ACO27458.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
03BB102]
Length = 444
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ ILD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLIARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 322
>gi|443478406|ref|ZP_21068164.1| sun protein [Pseudanabaena biceps PCC 7429]
gi|443016313|gb|ELS31003.1| sun protein [Pseudanabaena biceps PCC 7429]
Length = 450
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
+ QLP F EG +Q+ + + + LDPQ E ++D CAAPGGKTT I+ L++ G+
Sbjct: 228 VSQLPKFK---EGWWSVQDASAQLVTYLLDPQPHEIVVDACAAPGGKTTHISDRLKNTGK 284
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
V A+DR +++ +++ AA +G+ + T +LDA
Sbjct: 285 VYALDRLASRLKKVEQNAARLGITNVQTIELDA 317
>gi|427719814|ref|YP_007067808.1| sun protein [Calothrix sp. PCC 7507]
gi|427352250|gb|AFY34974.1| sun protein [Calothrix sp. PCC 7507]
Length = 451
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I LP F EG +Q+ + + +H LDPQ GE ++D+CAAPGGKTT IA L+ D G+
Sbjct: 227 IPNLPGFQ---EGWWTVQDSSAQLVSHLLDPQPGEVVIDVCAAPGGKTTHIAELMGDSGK 283
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCI 314
V A DR+ +++ +Q+ + + L+ I
Sbjct: 284 VWACDRTASRLRKLQENSRRLNLQSI 309
>gi|409095981|ref|ZP_11216005.1| tRNA/RNA cytosine-C5-methylase [Thermococcus zilligii AN1]
Length = 451
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 52/75 (69%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G+ +Q+L S AH L P+ GER+LD+ AAPG KT A+L+ + GE+VAVD S++++
Sbjct: 240 QGKFVIQDLASAYVAHVLAPEPGERVLDLAAAPGSKTFHAAALMENRGEIVAVDYSYDRL 299
Query: 300 MDIQKLAAEMGLKCI 314
M +++ +G++ +
Sbjct: 300 MRMKEKMKLLGIENV 314
>gi|440683854|ref|YP_007158649.1| sun protein [Anabaena cylindrica PCC 7122]
gi|428680973|gb|AFZ59739.1| sun protein [Anabaena cylindrica PCC 7122]
Length = 455
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I LP F EG +Q+ + + H LDP+ GE ++D CAAPGGKTT IA L+ D G+
Sbjct: 232 IQNLPGFR---EGWWTIQDSSAQLVGHLLDPKPGEVVIDACAAPGGKTTHIAELMGDHGK 288
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESN 332
+ A D++ +++ +Q A + L+ I Y D+ + N+++
Sbjct: 289 IWACDKTASRLRKLQDNARRLNLQSIEIYTGDSCNLPQFYNQAD 332
>gi|357617082|gb|EHJ70573.1| putative williams-beuren syndrome critical region protein [Danaus
plexippus]
Length = 638
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 235 FYD---VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
F+D L +I LQ+ + + H L P G +LDMCAAPG KTT +A+ LR++G+V A
Sbjct: 198 FHDHDLYLNNQIILQDKATALAVHLLAPPSGSTVLDMCAAPGMKTTQVAAYLRNQGKVYA 257
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
V+R+ + + +L KC+ T D L+ R
Sbjct: 258 VERNDQRYQTLCQLVESTSSKCVETIHKDVLEIKR 292
>gi|164687800|ref|ZP_02211828.1| hypothetical protein CLOBAR_01444 [Clostridium bartlettii DSM
16795]
gi|164603075|gb|EDQ96540.1| ribosomal RNA small subunit methyltransferase B [Clostridium
bartlettii DSM 16795]
Length = 441
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 196 ERSGLYIGQGTAMMSRAGIFRASEGIAVD-----MHNRIFQLPSFYDVLEGEIF------ 244
ER +Y+ T +R + + E V+ + ++ + ++ E++
Sbjct: 174 ERPSIYLRVNTLKTTRDELIKLLEEQEVNCEKVPFMDEAIKVNNLKNIENNELYKKGLFT 233
Query: 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304
+Q++ S++ L+PQK ++LD+C+APGGKTT IA+L+ + G+V++ D +K+ IQ
Sbjct: 234 VQDISSMLVGKILNPQKDTKVLDVCSAPGGKTTHIATLMENSGQVISRDIFEHKIKLIQN 293
Query: 305 LAAEMGLKCITTYKLDAL 322
+GLK + DAL
Sbjct: 294 SVNRLGLKNVDVQLFDAL 311
>gi|300854445|ref|YP_003779429.1| rRNA subunit cytosine-methyltransferase [Clostridium ljungdahlii
DSM 13528]
gi|300434560|gb|ADK14327.1| predicted rRNA subunit cytosine-methyltransferase [Clostridium
ljungdahlii DSM 13528]
Length = 443
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
E + ++ + I + P F +G I +Q+ +++ AH +DP++ +LDMC+APGGK+
Sbjct: 212 EAVVINRGSNIEENPLFK---KGYITVQDESAMLVAHIVDPEENMTVLDMCSAPGGKSCH 268
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR 327
+A L+++ G + A D NK+ +++ A M +K I KLDA K V +
Sbjct: 269 MAELMKNTGVIYAYDLHENKLRFVEENANRMDIKNIKCNKLDAEKYVEQ 317
>gi|212639615|ref|YP_002316135.1| rRNA cytosine-C5-methylase [Anoxybacillus flavithermus WK1]
gi|212561095|gb|ACJ34150.1| rRNA cytosine-C5-methylase [Anoxybacillus flavithermus WK1]
Length = 446
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG I +Q+ S++ A+AL P + + +LD CAAPGGKTT IA + + G VVA+D +KV
Sbjct: 226 EGLITIQDESSMLVAYALSPNETDVVLDCCAAPGGKTTHIAERMNNRGRVVALDIHDHKV 285
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +LD+ +A
Sbjct: 286 KLIEQQAKRLGLSNIEAKQLDSRQA 310
>gi|397651760|ref|YP_006492341.1| nol1-nop2-sun family nucleolar protein II [Pyrococcus furiosus
COM1]
gi|393189351|gb|AFN04049.1| nol1-nop2-sun family nucleolar protein II [Pyrococcus furiosus
COM1]
Length = 433
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 52/75 (69%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +Q+L S AH L P+ GER+LD+ AAPG KT A+L+ ++GE+VAVD S+ ++
Sbjct: 223 KGYFVIQDLASAYVAHVLSPEPGERVLDLAAAPGSKTFHAAALMENKGEIVAVDYSYERL 282
Query: 300 MDIQKLAAEMGLKCI 314
+ +++ ++G+K +
Sbjct: 283 VRMKERMKKLGVKNV 297
>gi|433446078|ref|ZP_20410209.1| ribosomal RNA small subunit methyltransferase B [Anoxybacillus
flavithermus TNO-09.006]
gi|432000823|gb|ELK21715.1| ribosomal RNA small subunit methyltransferase B [Anoxybacillus
flavithermus TNO-09.006]
Length = 446
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG I +Q+ S++ A+AL P + + +LD CAAPGGKTT IA + + G VVA+D +KV
Sbjct: 226 EGLITIQDESSMLVAYALSPNETDVVLDCCAAPGGKTTHIAERMNNRGRVVALDIHDHKV 285
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
I++ A +GL I +LD+ +A
Sbjct: 286 KLIEQQAKRLGLSNIEAKQLDSRQA 310
>gi|229006142|ref|ZP_04163829.1| Ribosomal RNA small subunit methyltransferase B [Bacillus mycoides
Rock1-4]
gi|228755095|gb|EEM04453.1| Ribosomal RNA small subunit methyltransferase B [Bacillus mycoides
Rock1-4]
Length = 415
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ A AL P++G+ +LD CAAPGGKTT IA L+ G+V ++D +KV
Sbjct: 199 GFLSIQDESSMLVARALKPEEGDMVLDSCAAPGGKTTHIAERLKGTGQVTSLDLHPHKVR 258
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
IQ+ A + L+ I T LDA K NES D+
Sbjct: 259 LIQQQAKRLELENIETKALDARKVQEHFANESFDK 293
>gi|337283536|ref|YP_004623010.1| sun protein (fmu protein) [Pyrococcus yayanosii CH1]
gi|334899470|gb|AEH23738.1| sun protein (fmu protein) [Pyrococcus yayanosii CH1]
Length = 450
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 50/74 (67%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G +Q+L S AH L P+ GER+LD+ AAPG KT A+L+ ++GE+VAVD S+ +++
Sbjct: 241 GYFVIQDLASAYVAHVLKPEPGERVLDLAAAPGSKTFHAAALMENKGEIVAVDYSYERLI 300
Query: 301 DIQKLAAEMGLKCI 314
+++ +G+K +
Sbjct: 301 KMKERMKRLGVKNV 314
>gi|18977637|ref|NP_578994.1| nol1-nop2-sun family nucleolar protein II [Pyrococcus furiosus DSM
3638]
gi|18893359|gb|AAL81389.1| putative nucleolar protein II (nol1-nop2-sun family) [Pyrococcus
furiosus DSM 3638]
Length = 450
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 52/75 (69%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +Q+L S AH L P+ GER+LD+ AAPG KT A+L+ ++GE+VAVD S+ ++
Sbjct: 240 KGYFVIQDLASAYVAHVLSPEPGERVLDLAAAPGSKTFHAAALMENKGEIVAVDYSYERL 299
Query: 300 MDIQKLAAEMGLKCI 314
+ +++ ++G+K +
Sbjct: 300 VRMKERMKKLGVKNV 314
>gi|228992593|ref|ZP_04152520.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
pseudomycoides DSM 12442]
gi|228998641|ref|ZP_04158228.1| Ribosomal RNA small subunit methyltransferase B [Bacillus mycoides
Rock3-17]
gi|228761109|gb|EEM10068.1| Ribosomal RNA small subunit methyltransferase B [Bacillus mycoides
Rock3-17]
gi|228767227|gb|EEM15863.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
pseudomycoides DSM 12442]
Length = 415
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ A AL P++G+ +LD CAAPGGKTT IA L+ G+V ++D +KV
Sbjct: 199 GFLSIQDESSMLVARALKPEEGDMVLDSCAAPGGKTTHIAERLKGTGQVTSLDLHPHKVR 258
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
IQ+ A + L+ I T LDA K NES D+
Sbjct: 259 LIQQQAKRLELENIETKALDARKVQEHFANESFDK 293
>gi|423395834|ref|ZP_17373035.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG2X1-1]
gi|401653576|gb|EJS71120.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG2X1-1]
Length = 444
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NES D+
Sbjct: 287 RLIKQQADRLGLENVETKALDARKVQEHFANESFDK 322
>gi|296121363|ref|YP_003629141.1| sun protein [Planctomyces limnophilus DSM 3776]
gi|296013703|gb|ADG66942.1| sun protein [Planctomyces limnophilus DSM 3776]
Length = 471
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 228 RIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEG 287
RI LP F EGE +Q+L + A L+PQ GE +LD+CAAPG KT +A L++++G
Sbjct: 260 RISTLPGFP---EGEFSVQDLSAQHAARRLNPQPGEVVLDLCAAPGSKTCHMAELMQNQG 316
Query: 288 EVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
E++A D ++ + + A +GL I T
Sbjct: 317 EIIAADTHGGRIRQVYENAERLGLSIIRT 345
>gi|282895327|ref|ZP_06303529.1| Fmu, rRNA SAM-dependent methyltransferase [Raphidiopsis brookii D9]
gi|281199633|gb|EFA74493.1| Fmu, rRNA SAM-dependent methyltransferase [Raphidiopsis brookii D9]
Length = 465
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 26/144 (18%)
Query: 201 YIGQGTAMMSRAGIFRAS----------EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPS 250
++ Q + R I RAS GI VD RI LP ++ +QNLP
Sbjct: 195 WMNQTPTIDLRVNILRASLEMVESVFKKAGILVD---RIPHLPQGLRLVNPAGPIQNLPG 251
Query: 251 I-------------VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297
+ H LDP+ GE I+D+CAAPGGKTT IA L+ D G++ A DR+ +
Sbjct: 252 FTEGWWCIQDAAAQLVGHLLDPKPGEVIIDVCAAPGGKTTHIAELMGDNGKIYACDRTPS 311
Query: 298 KVMDIQKLAAEMGLKCITTYKLDA 321
++ + + A + L+ I + D+
Sbjct: 312 RLRKLSENAQRLRLQSIEIFPGDS 335
>gi|14601183|ref|NP_147715.1| RNA (cytosine-C(5)-)-methyltransferase [Aeropyrum pernix K1]
gi|5104768|dbj|BAA80083.1| RNA (cytosine-C(5)-)-methyltransferase [Aeropyrum pernix K1]
Length = 388
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 120/291 (41%), Gaps = 63/291 (21%)
Query: 38 ALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIP 97
+L RP +RVNTLK D ++ L +
Sbjct: 35 SLERPPPRLYVRVNTLKVGVDRYLEMLRGV------------------------------ 64
Query: 98 GLEYVVF--VKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVE 155
GLE+ V + + H ++ + + K V+ + +E+VL G+ +Y PGV+ + VE
Sbjct: 65 GLEFRVDEDIPEAIWHPVEGPFSWEFRGKRVVADKVASESVLMGSDLYAPGVV-YARGVE 123
Query: 156 KGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIF 215
+GD V I R G+G A+ I+
Sbjct: 124 RGDEVV-----------------IVAPNGRVVGGGVAVMSWREMRRAGRGLAVRVTKPIY 166
Query: 216 RASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGK 275
RA R+ +LP F EG ++ Q++ S+ A ALDP+ G ++D+ AAPGGK
Sbjct: 167 RAP---------RVSELPGFR---EGLVYGQSVTSMYVARALDPRPGWVVVDLNAAPGGK 214
Query: 276 TTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326
+ +A L E +VA+DR +KV +++ +G + D+ +A R
Sbjct: 215 VSHVAQLAGREAVIVAIDRP-SKVGRLRETLERLGAGWVRVVGGDSRRASR 264
>gi|423406710|ref|ZP_17383859.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG2X1-3]
gi|401660000|gb|EJS77483.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG2X1-3]
Length = 444
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NES D+
Sbjct: 287 RLIKQQADRLGLENVETKALDARKVQEHFANESFDK 322
>gi|47569491|ref|ZP_00240171.1| sun protein [Bacillus cereus G9241]
gi|47553820|gb|EAL12191.1| sun protein [Bacillus cereus G9241]
Length = 444
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 322
>gi|52141623|ref|YP_085206.1| sun protein [Bacillus cereus E33L]
gi|51975092|gb|AAU16642.1| sun protein [Bacillus cereus E33L]
Length = 444
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 322
>gi|326389542|ref|ZP_08211109.1| sun protein [Thermoanaerobacter ethanolicus JW 200]
gi|392940847|ref|ZP_10306491.1| ribosomal RNA small subunit methyltransferase RsmB
[Thermoanaerobacter siderophilus SR4]
gi|325994547|gb|EGD52972.1| sun protein [Thermoanaerobacter ethanolicus JW 200]
gi|392292597|gb|EIW01041.1| ribosomal RNA small subunit methyltransferase RsmB
[Thermoanaerobacter siderophilus SR4]
Length = 444
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 66/108 (61%), Gaps = 6/108 (5%)
Query: 215 FRASEGIAVDMHNRIFQLPSFYDVL-EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPG 273
+ E + +D+ N P + + EG I++Q+ S++ + L+P++G+ +LD+CAAPG
Sbjct: 206 YYLEEALYIDIKN-----PERHQLYKEGLIYIQDEASMLVSKTLNPKEGDTVLDVCAAPG 260
Query: 274 GKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
GKTT IA L+++ GEV+A D +++ I++ +G+ + T D+
Sbjct: 261 GKTTHIAQLMKNSGEVIAFDLHPHRLELIKENCKRLGITNVKTEVFDS 308
>gi|345017809|ref|YP_004820162.1| sun protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|344033152|gb|AEM78878.1| sun protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 444
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 66/108 (61%), Gaps = 6/108 (5%)
Query: 215 FRASEGIAVDMHNRIFQLPSFYDVL-EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPG 273
+ E + +D+ N P + + EG I++Q+ S++ + L+P++G+ +LD+CAAPG
Sbjct: 206 YYLEEALYIDIKN-----PERHQLYKEGLIYIQDEASMLVSKTLNPKEGDTVLDVCAAPG 260
Query: 274 GKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
GKTT IA L+++ GEV+A D +++ I++ +G+ + T D+
Sbjct: 261 GKTTHIAQLMKNSGEVIAFDLHPHRLELIKENCKRLGITNVKTEVFDS 308
>gi|228987008|ref|ZP_04147134.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229157441|ref|ZP_04285519.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus ATCC
4342]
gi|228626168|gb|EEK82917.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus ATCC
4342]
gi|228772786|gb|EEM21226.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 360
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 143 KGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 202
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 203 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 238
>gi|315231384|ref|YP_004071820.1| tRNA/RNA cytosine-C5-methylase [Thermococcus barophilus MP]
gi|315184412|gb|ADT84597.1| tRNA/RNA cytosine-C5-methylase [Thermococcus barophilus MP]
Length = 451
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +Q+L S AH L P+KGERILD+ AAPG KT +A L+ + GE++AVD S ++
Sbjct: 240 QGYFVIQDLASAYVAHVLGPEKGERILDLAAAPGSKTFHVAHLMENTGEIIAVDYSLERL 299
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
+++ +G++ + D +K
Sbjct: 300 NKMREKMKILGVRNVKLVHADGMK 323
>gi|158338705|ref|YP_001519882.1| ribosomal RNA small subunit methyltransferase B [Acaryochloris
marina MBIC11017]
gi|158308946|gb|ABW30563.1| ribosomal RNA small subunit methyltransferase B [Acaryochloris
marina MBIC11017]
Length = 443
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I QLP F EG +Q + + H L+PQ G LD+CAAPGGKTT IA L+ ++GE
Sbjct: 225 IPQLPGFQ---EGLWTVQEASAQLVGHLLNPQPGAIALDVCAAPGGKTTHIAELMENQGE 281
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
V A DR+ +++ + + +G+ +T + D+
Sbjct: 282 VWACDRTPSRLRKLNQNTQRLGIDTVTIWTGDS 314
>gi|373106183|ref|ZP_09520486.1| ribosomal RNA small subunit methyltransferase B [Stomatobaculum
longum]
gi|371652558|gb|EHO17966.1| ribosomal RNA small subunit methyltransferase B [Stomatobaculum
longum]
Length = 447
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG F+Q+L S + A P+ GER+LD+CAAPGGK+ A A +R EG +V+ D S KV
Sbjct: 229 EGMFFVQDLSSSLAVQAAQPKPGERVLDLCAAPGGKSLAAADCMRGEGSIVSADLSPQKV 288
Query: 300 MDIQKLAAEMGLK-CITTYKLDA 321
+++ A G C+ + DA
Sbjct: 289 ERMRENVARTGFSGCVRPLQSDA 311
>gi|229111336|ref|ZP_04240889.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock1-15]
gi|228672112|gb|EEL27403.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock1-15]
Length = 429
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 212 KGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 271
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 272 RLIKQQAERLGLENVETKALDARKVQEHFSNETFDK 307
>gi|253575778|ref|ZP_04853113.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251844821|gb|EES72834.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 506
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L S+Y EG I +Q+ S++ A ALDPQ G +LD CAAPGGKT IA ++ G V+A
Sbjct: 276 LTSWYR--EGLISVQDESSMLVAEALDPQPGMNVLDCCAAPGGKTCHIAEIMEGRGRVLA 333
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR 327
D +K I+ A +GL + T DAL+ R
Sbjct: 334 NDIHPHKAKLIEDHAKRLGLDNVDTLSGDALQLAER 369
>gi|448436000|ref|ZP_21587016.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum
tebenquichense DSM 14210]
gi|445683160|gb|ELZ35563.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum
tebenquichense DSM 14210]
Length = 321
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 222 AVDMHNRIFQLPS-----FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
AVD H+ +F+LP + + G Q S++ ALDP+ GER+ D CAAPG KT
Sbjct: 54 AVDWHDGLFRLPDGNPGGNWPYVHGWTHGQEEVSVLPGLALDPRPGERVWDACAAPGSKT 113
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
T IA + DEG VVA D + ++ ++ A +G+ DA
Sbjct: 114 TQIADAMGDEGTVVANDNNLGRLSALRHNAERLGITNTVVTNQDA 158
>gi|282850140|ref|ZP_06259519.1| ribosomal RNA small subunit methyltransferase B [Veillonella
parvula ATCC 17745]
gi|294793653|ref|ZP_06758790.1| ribosomal RNA small subunit methyltransferase B [Veillonella sp.
3_1_44]
gi|416998935|ref|ZP_11939604.1| ribosomal RNA small subunit methyltransferase B [Veillonella
parvula ACS-068-V-Sch12]
gi|282579633|gb|EFB85037.1| ribosomal RNA small subunit methyltransferase B [Veillonella
parvula ATCC 17745]
gi|294455223|gb|EFG23595.1| ribosomal RNA small subunit methyltransferase B [Veillonella sp.
3_1_44]
gi|333977088|gb|EGL77947.1| ribosomal RNA small subunit methyltransferase B [Veillonella
parvula ACS-068-V-Sch12]
Length = 451
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%)
Query: 238 VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297
VLEG I + S++ AH +DPQ GE ILD CAAPGGK+ +ASL+ + G +++ D +
Sbjct: 238 VLEGHITFMDKASMLVAHVVDPQPGELILDCCAAPGGKSMHMASLMNNTGAIMSCDIYDH 297
Query: 298 KVMDIQKLAAEMGLKCITT 316
K+ I + A +G+ I+T
Sbjct: 298 KLELINQNAERLGVSIIST 316
>gi|423426001|ref|ZP_17403032.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG3X2-2]
gi|423437320|ref|ZP_17414301.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG4X12-1]
gi|423503457|ref|ZP_17480049.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HD73]
gi|449090808|ref|YP_007423249.1| ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar kurstaki str. HD73]
gi|401110748|gb|EJQ18647.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG3X2-2]
gi|401120475|gb|EJQ28271.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG4X12-1]
gi|402459678|gb|EJV91415.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HD73]
gi|449024565|gb|AGE79728.1| ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar kurstaki str. HD73]
Length = 444
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 322
>gi|228940953|ref|ZP_04103512.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228973882|ref|ZP_04134458.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228980472|ref|ZP_04140782.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis Bt407]
gi|228779292|gb|EEM27549.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis Bt407]
gi|228785907|gb|EEM33910.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228818789|gb|EEM64855.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar berliner ATCC 10792]
Length = 429
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 212 KGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 271
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 272 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 307
>gi|423615874|ref|ZP_17591708.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD115]
gi|401260411|gb|EJR66584.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD115]
Length = 444
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +GE +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNEGETVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ A +GL+ + LDA K
Sbjct: 287 RLIKQQAERLGLENVEIKALDARK 310
>gi|313893390|ref|ZP_07826962.1| ribosomal RNA small subunit methyltransferase B [Veillonella sp.
oral taxon 158 str. F0412]
gi|313442031|gb|EFR60451.1| ribosomal RNA small subunit methyltransferase B [Veillonella sp.
oral taxon 158 str. F0412]
Length = 451
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 238 VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297
V+EG I + S++ AH +DPQ GERILD CAAPGGK+ +ASL+ + G +++ D +
Sbjct: 238 VIEGHITFMDKASMLVAHVVDPQPGERILDCCAAPGGKSMHMASLMNNTGAIMSCDIYDH 297
Query: 298 KVMDIQKLAAEMGLKCITT 316
K+ + + A +G+ ++T
Sbjct: 298 KLDLMNQNAERLGVSIVST 316
>gi|384187925|ref|YP_005573821.1| sun protein [Bacillus thuringiensis serovar chinensis CT-43]
gi|410676239|ref|YP_006928610.1| ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis Bt407]
gi|423528274|ref|ZP_17504719.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuB1-1]
gi|452200304|ref|YP_007480385.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|326941634|gb|AEA17530.1| sun protein [Bacillus thuringiensis serovar chinensis CT-43]
gi|402451937|gb|EJV83756.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuB1-1]
gi|409175368|gb|AFV19673.1| ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis Bt407]
gi|452105697|gb|AGG02637.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 444
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ A +GL+ + T LDA K
Sbjct: 287 RLIKQQAERLGLENVETKALDARK 310
>gi|228954142|ref|ZP_04116170.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|229071363|ref|ZP_04204586.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
F65185]
gi|229081120|ref|ZP_04213630.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock4-2]
gi|228702164|gb|EEL54640.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock4-2]
gi|228711817|gb|EEL63769.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
F65185]
gi|228805462|gb|EEM52053.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 429
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 212 KGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 271
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 272 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 307
>gi|228960081|ref|ZP_04121745.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|229047552|ref|ZP_04193142.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH676]
gi|229146436|ref|ZP_04274807.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BDRD-ST24]
gi|229152064|ref|ZP_04280259.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
m1550]
gi|229192034|ref|ZP_04319004.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
ATCC 10876]
gi|228591585|gb|EEK49434.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
ATCC 10876]
gi|228631413|gb|EEK88047.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
m1550]
gi|228637069|gb|EEK93528.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BDRD-ST24]
gi|228723799|gb|EEL75154.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH676]
gi|228799597|gb|EEM46550.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar pakistani str. T13001]
Length = 429
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 212 KGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 271
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 272 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 307
>gi|206971310|ref|ZP_03232261.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH1134]
gi|218233863|ref|YP_002368666.1| sun protein [Bacillus cereus B4264]
gi|296504360|ref|YP_003666060.1| sun protein [Bacillus thuringiensis BMB171]
gi|423412330|ref|ZP_17389450.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG3O-2]
gi|423431885|ref|ZP_17408889.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG4O-1]
gi|423585726|ref|ZP_17561813.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD045]
gi|423628958|ref|ZP_17604707.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD154]
gi|423641054|ref|ZP_17616672.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD166]
gi|423649728|ref|ZP_17625298.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD169]
gi|423656724|ref|ZP_17632023.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD200]
gi|206734082|gb|EDZ51253.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH1134]
gi|218161820|gb|ACK61812.1| sun protein [Bacillus cereus B4264]
gi|296325412|gb|ADH08340.1| sun protein [Bacillus thuringiensis BMB171]
gi|401104398|gb|EJQ12375.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG3O-2]
gi|401116641|gb|EJQ24479.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG4O-1]
gi|401233072|gb|EJR39568.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD045]
gi|401268503|gb|EJR74551.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD154]
gi|401280115|gb|EJR86037.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD166]
gi|401283008|gb|EJR88905.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD169]
gi|401290465|gb|EJR96159.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD200]
Length = 444
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ A +GL+ + T LDA K
Sbjct: 287 RLIKQQAERLGLENVETKALDARK 310
>gi|30021953|ref|NP_833584.1| sun protein [Bacillus cereus ATCC 14579]
gi|29897509|gb|AAP10785.1| 16S rRNA m(5)C 967 methyltransferase [Bacillus cereus ATCC 14579]
Length = 444
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 322
>gi|423582075|ref|ZP_17558186.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD014]
gi|401212954|gb|EJR19695.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD014]
Length = 444
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ A +GL+ + T LDA K
Sbjct: 287 RLIKQQAERLGLENVETKALDARK 310
>gi|427702673|ref|YP_007045895.1| ribosomal RNA small subunit methyltransferase RsmB [Cyanobium
gracile PCC 6307]
gi|427345841|gb|AFY28554.1| ribosomal RNA small subunit methyltransferase RsmB [Cyanobium
gracile PCC 6307]
Length = 472
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ + A LDP+ G+RILD CAAPGGK+T +A L+ D GEV A+DRS ++
Sbjct: 263 EGLWCVQDRSAQAIAPLLDPRPGQRILDACAAPGGKSTHLAELIGDRGEVWALDRSEARL 322
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
+ A +GL I + DA
Sbjct: 323 RRLDHNAERLGLTTIRSLAADA 344
>gi|167040389|ref|YP_001663374.1| sun protein [Thermoanaerobacter sp. X514]
gi|256752273|ref|ZP_05493136.1| sun protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300914473|ref|ZP_07131789.1| sun protein [Thermoanaerobacter sp. X561]
gi|307724291|ref|YP_003904042.1| sun protein [Thermoanaerobacter sp. X513]
gi|166854629|gb|ABY93038.1| sun protein [Thermoanaerobacter sp. X514]
gi|256748841|gb|EEU61882.1| sun protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300889408|gb|EFK84554.1| sun protein [Thermoanaerobacter sp. X561]
gi|307581352|gb|ADN54751.1| sun protein [Thermoanaerobacter sp. X513]
Length = 444
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 66/108 (61%), Gaps = 6/108 (5%)
Query: 215 FRASEGIAVDMHNRIFQLPSFYDVL-EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPG 273
+ E + +D+ N P + + EG I++Q+ S++ + L+P++GE ++D+CAAPG
Sbjct: 206 YYLEEALYIDIKN-----PESHQLYKEGFIYIQDEASMLVSKILNPKEGETVIDVCAAPG 260
Query: 274 GKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
GKTT IA L+++ G+VVA D +++ I++ +G+ + T D+
Sbjct: 261 GKTTHIAQLMKNNGKVVAFDLHPHRLELIKENCKRLGITNVKTEAFDS 308
>gi|365159358|ref|ZP_09355539.1| ribosomal RNA small subunit methyltransferase B [Bacillus sp.
7_6_55CFAA_CT2]
gi|363625356|gb|EHL76397.1| ribosomal RNA small subunit methyltransferase B [Bacillus sp.
7_6_55CFAA_CT2]
Length = 444
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 322
>gi|345304456|ref|YP_004826358.1| tRNA (cytosine-5-)-methyltransferase [Rhodothermus marinus
SG0.5JP17-172]
gi|345113689|gb|AEN74521.1| tRNA (cytosine-5-)-methyltransferase [Rhodothermus marinus
SG0.5JP17-172]
Length = 304
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 88/189 (46%), Gaps = 13/189 (6%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G +Q S++ LDPQ GER+LD+CAAPGGKT IA +R+ G VVA DR+ ++
Sbjct: 82 GHYHVQEEVSLLPVPLLDPQPGERVLDLCAAPGGKTAQIAVRMRNRGTVVANDRNPLRLR 141
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESN----DEPNMCNSKDNNYITSQTSDSMKL 356
+ +GL +TT D + D P C+ + N Q +D+
Sbjct: 142 QLSGTIERLGLLNVTTTLHDGADYPLESGPFDRVLIDVP--CSCEGNFRKDQQVADAFAG 199
Query: 357 HKEVPSIAAEGLNGDKS-CKEKGRTC-GECGMAQEEINALVVGLRIQK----VLVLTALI 410
E+ + L+ + C+ GR C A EE N LVV +++ + +L A +
Sbjct: 200 APELCGLQTALLHRAVTLCRPGGRIVYATCTFAPEE-NELVVDAVLRRWGEALRLLPARL 258
Query: 411 ESFLMLPVL 419
E F P L
Sbjct: 259 EGFRGAPGL 267
>gi|423635364|ref|ZP_17611017.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD156]
gi|401278115|gb|EJR84051.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD156]
Length = 444
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ A +GL+ + T LDA K
Sbjct: 287 RLIKQQAERLGLENVETKALDARK 310
>gi|389847107|ref|YP_006349346.1| tRNA and rRNA cytosine-C5-methylase [Haloferax mediterranei ATCC
33500]
gi|448614944|ref|ZP_21663972.1| tRNA and rRNA cytosine-C5-methylase [Haloferax mediterranei ATCC
33500]
gi|388244413|gb|AFK19359.1| tRNA and rRNA cytosine-C5-methylase [Haloferax mediterranei ATCC
33500]
gi|445753031|gb|EMA04450.1| tRNA and rRNA cytosine-C5-methylase [Haloferax mediterranei ATCC
33500]
Length = 313
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 219 EGIA---VDMHNRIFQL---------PSFYDVLEGEIFLQNLPSIVTAHALDPQKGERIL 266
EG+A D H I +L P F+ L G+ + LP+I ALDPQ GERI
Sbjct: 48 EGVAYEPTDWHPGILKLEESSPGTNWPYFHGWLHGQEEVSALPAI----ALDPQPGERIW 103
Query: 267 DMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
D CAAPG KTT IA+++ DEG +V D + ++ ++ A +G+ + DA
Sbjct: 104 DTCAAPGSKTTQIAAMMDDEGVLVGNDNNLGRLSALRHNAERLGVTNLVVSNQDA 158
>gi|359403639|ref|ZP_09196543.1| putative rRNA small subunit methyltransferase B [Spiroplasma
melliferum KC3]
gi|438119635|ref|ZP_20871755.1| RNA-binding Sun protein [Spiroplasma melliferum IPMB4A]
gi|358832870|gb|EHK51974.1| putative rRNA small subunit methyltransferase B [Spiroplasma
melliferum KC3]
gi|434155383|gb|ELL44336.1| RNA-binding Sun protein [Spiroplasma melliferum IPMB4A]
Length = 423
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 55/84 (65%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G IF+Q+ S+ A LDPQ+ +R+LDMC+APGGK T ++ ++ ++G + A D S K+
Sbjct: 224 KGLIFIQDEMSMRIAEILDPQETDRVLDMCSAPGGKATHLSQIMNNKGIIDAYDISEKKI 283
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I+ A+ +G+ I + LDA K
Sbjct: 284 NLIKMNASRLGITNIYPHLLDARK 307
>gi|423385368|ref|ZP_17362624.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG1X1-2]
gi|401635424|gb|EJS53179.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG1X1-2]
Length = 444
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ A +GL+ + T LDA K
Sbjct: 287 RLIKQQAERLGLENVETKALDARK 310
>gi|253741386|gb|EES98257.1| Nucleolar protein NOP2 [Giardia intestinalis ATCC 50581]
Length = 497
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G +Q+ S + AL+P+ GERILDM AAPGGKTT + +L++D G ++A D +
Sbjct: 269 EYLRGYYMIQDAASFLPPMALNPKPGERILDMSAAPGGKTTHLGALMQDSGMILANDMNR 328
Query: 297 NKVMDIQKLAAEMGLKC 313
+++ +Q A MG+ C
Sbjct: 329 DRIPALQANLARMGVTC 345
>gi|228922619|ref|ZP_04085919.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228837048|gb|EEM82389.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 368
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 151 KGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 210
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 211 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 246
>gi|229129141|ref|ZP_04258114.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BDRD-Cer4]
gi|228654378|gb|EEL10243.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BDRD-Cer4]
Length = 429
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 212 KGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 271
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 272 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 307
>gi|167037728|ref|YP_001665306.1| sun protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320116143|ref|YP_004186302.1| sun protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166856562|gb|ABY94970.1| sun protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319929234|gb|ADV79919.1| sun protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 444
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 56/82 (68%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG I++Q+ S++ + L+P++GE ++D+CAAPGGKTT IA L+++ G+VVA D +++
Sbjct: 227 EGFIYIQDEASMLVSKILNPKEGETVIDVCAAPGGKTTHIAQLMKNNGKVVAFDLHPHRL 286
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
I++ +G+ + T D+
Sbjct: 287 ELIKENCKRLGITNVKTEAFDS 308
>gi|448454964|ref|ZP_21594366.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum lipolyticum
DSM 21995]
gi|445814344|gb|EMA64309.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum lipolyticum
DSM 21995]
Length = 310
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 219 EGIAVD---MHNRIFQLPS-----FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCA 270
EG+A D H+ +F+LP + + G Q S++ ALDPQ GER+ D CA
Sbjct: 48 EGVAYDPVGWHDGLFRLPDGNPGGNWPYVHGWTHGQEEVSVLPGLALDPQPGERVWDACA 107
Query: 271 APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
APG KTT IA + DEG VVA D + ++ ++ A +G+ DA
Sbjct: 108 APGSKTTQIADAMDDEGTVVANDNNLGRLSALRHNAERLGITNAIVTNQDA 158
>gi|428311848|ref|YP_007122825.1| ribosomal RNA small subunit methyltransferase RsmB [Microcoleus sp.
PCC 7113]
gi|428253460|gb|AFZ19419.1| ribosomal RNA small subunit methyltransferase RsmB [Microcoleus sp.
PCC 7113]
Length = 485
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
Query: 201 YIGQGTAMMSRAGIFRAS-EGIAVDMHN------RIFQLPSFYDVLEGEIFLQNLPSI-- 251
++ Q + R R S E + V M + RI QLP V+ G +Q LP
Sbjct: 213 WLNQTPTIDLRVNPMRVSIEEVEVAMQSTGVEVRRIPQLPQALRVMGGAGNIQQLPGFRE 272
Query: 252 -----------VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
+ +H L+PQ GE ++D CAAPGGKTT IA L+ D+G + A DR+ +++
Sbjct: 273 GWWTVQDSSAQLVSHLLNPQAGEVVIDACAAPGGKTTHIAELMGDQGTIWACDRAASRLK 332
Query: 301 DIQKLAAEMGLKCI 314
+Q+ + L+ I
Sbjct: 333 KLQENTQRLQLQSI 346
>gi|110004340|emb|CAK98678.1| putative ribosomal rna small subunit methyltransferase protein
[Spiroplasma citri]
Length = 423
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 55/84 (65%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G IF+Q+ S+ A LDPQ+ +R+LDMC+APGGK T ++ ++ ++G + A D S K+
Sbjct: 224 KGLIFIQDEMSMRIAEILDPQETDRVLDMCSAPGGKATHLSQIINNKGIIDAYDISEKKI 283
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I+ A+ +G+ I + LDA K
Sbjct: 284 NLIKMNASRLGITNIYPHLLDARK 307
>gi|229162801|ref|ZP_04290758.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
R309803]
gi|228620683|gb|EEK77552.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
R309803]
Length = 360
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 143 KGFLSIQDESSMLVARALEPNEGDVVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKV 202
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ A +GL+ + T LDA K
Sbjct: 203 RLIKQQADRLGLENVETKALDARK 226
>gi|222479906|ref|YP_002566143.1| RNA methylase, NOL1/NOP2/sun family [Halorubrum lacusprofundi ATCC
49239]
gi|222452808|gb|ACM57073.1| RNA methylase, NOL1/NOP2/sun family [Halorubrum lacusprofundi ATCC
49239]
Length = 314
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 219 EGIA---VDMHNRIFQLPS-----FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCA 270
EG+A VD H+ +F+LP + + G Q S++ ALDPQ GE + D CA
Sbjct: 48 EGVAYEPVDWHDGLFRLPDGNPGGNWPYVHGWTHGQEEVSVLPGLALDPQPGEHVWDACA 107
Query: 271 APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
APG KTT IA + DEG VVA D + ++ ++ A +G+ DA
Sbjct: 108 APGSKTTQIADAMNDEGTVVANDNNLGRLSALRHNAERLGITNAIVTNQDA 158
>gi|406831139|ref|ZP_11090733.1| sun protein [Schlesneria paludicola DSM 18645]
Length = 477
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 24/150 (16%)
Query: 192 PYYFERSGLYIGQGTAMMSRAGIFRAS---------------------EGIAVDMHNRIF 230
P R G + + +M+R R+S E ++ R+
Sbjct: 214 PEELFRMGAWFNSPSPLMARPNTLRSSYDEVVADFQAAGITIQPLEGTESFVIEGTTRVE 273
Query: 231 QLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVV 290
LP F +EG+ +Q+ + A L PQ G+R+ D+CAAPGGKT +A+L+++EG ++
Sbjct: 274 ALPGF---VEGKFVIQDFSASRAAVRLAPQPGQRVWDVCAAPGGKTCHLAALMKNEGHIL 330
Query: 291 AVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
A D +++ + + A +G I + +D
Sbjct: 331 ATDIRSDRLEIVHENAQRLGATIIRSQLVD 360
>gi|39998462|ref|NP_954413.1| 16S rRNA (5-methyl-C967)-methyltransferase [Geobacter
sulfurreducens PCA]
gi|409913814|ref|YP_006892279.1| 16S rRNA (5-methyl-C967)-methyltransferase [Geobacter
sulfurreducens KN400]
gi|39985409|gb|AAR36763.1| 16S rRNA (5-methyl-C967)-methyltransferase [Geobacter
sulfurreducens PCA]
gi|298507406|gb|ADI86129.1| 16S rRNA (5-methyl-C967)-methyltransferase [Geobacter
sulfurreducens KN400]
Length = 448
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Query: 220 GIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
GI + + LP F EG + +Q+ S + + L+P+ GER+LD CA+PGGK T +
Sbjct: 218 GIRILSRTAVPALPGFG---EGLVIVQDESSQLASLLLEPRSGERVLDACASPGGKATHL 274
Query: 280 ASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEP 335
A ++ D+GEV+A D S K+ I + A +G+ I DA R E N P
Sbjct: 275 AQIMADKGEVIAWDVSEKKLSPIAENARRLGIGIIRPAMADA-----RNPEQNAAP 325
>gi|308159767|gb|EFO62287.1| Nucleolar protein NOP2 [Giardia lamblia P15]
Length = 502
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G +Q+ S + AL+P+ GERILDM AAPGGKTT + +L++D G ++A D +
Sbjct: 274 EYLRGYYMIQDAASFLPPMALNPKPGERILDMSAAPGGKTTHLGALMQDSGMILANDMNR 333
Query: 297 NKVMDIQKLAAEMGLKC 313
+++ +Q A MG+ C
Sbjct: 334 DRIPALQANLARMGVTC 350
>gi|292655744|ref|YP_003535641.1| tRNA and rRNA cytosine-C5-methylase [Haloferax volcanii DS2]
gi|448289731|ref|ZP_21480894.1| tRNA and rRNA cytosine-C5-methylase [Haloferax volcanii DS2]
gi|291371381|gb|ADE03608.1| tRNA and rRNA cytosine-C5-methylase [Haloferax volcanii DS2]
gi|445581248|gb|ELY35609.1| tRNA and rRNA cytosine-C5-methylase [Haloferax volcanii DS2]
Length = 313
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 16/125 (12%)
Query: 209 MSRAGIFRASEGIA---VDMHNRIFQL---------PSFYDVLEGEIFLQNLPSIVTAHA 256
++RA EG+A D H I +L P F+ L G+ + LP+I A
Sbjct: 38 VARAREALDDEGVAYEPTDWHPGILELEDSSPGTNWPYFHGWLHGQEEVSALPAI----A 93
Query: 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
LDPQ GER+ D CAAPG KTT IA+++ DEG +V D + ++ ++ A +G+ +
Sbjct: 94 LDPQPGERVWDTCAAPGSKTTQIAAMMDDEGVLVGNDNNLGRLSALRHNAERLGVTNLVV 153
Query: 317 YKLDA 321
DA
Sbjct: 154 SNQDA 158
>gi|33239874|ref|NP_874816.1| tRNA and rRNA cytosine-C5-methylase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33237400|gb|AAP99468.1| tRNA and rRNA cytosine-C5-methylase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 438
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+GE +Q+ + L+P+ GE +LD C+APGGKTT +A L+ D GE+ AVDRS ++
Sbjct: 236 QGEWSVQDRSAQWVVPLLEPRSGEVVLDACSAPGGKTTHLAELMNDIGEIWAVDRSPKRL 295
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRK 328
+ AA +G CI DA + K
Sbjct: 296 QKVSLNAARLGHHCIKFLSADATNLIELK 324
>gi|448562423|ref|ZP_21635381.1| tRNA and rRNA cytosine-C5-methylase [Haloferax prahovense DSM
18310]
gi|445718741|gb|ELZ70425.1| tRNA and rRNA cytosine-C5-methylase [Haloferax prahovense DSM
18310]
Length = 313
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 16/125 (12%)
Query: 209 MSRAGIFRASEGIA---VDMHNRIFQL---------PSFYDVLEGEIFLQNLPSIVTAHA 256
++RA EG+A D H I +L P F+ L G+ + LP+I A
Sbjct: 38 VTRAREALDDEGVAYEPTDWHPGILKLEDSSPGTNWPYFHGWLHGQEEVSALPAI----A 93
Query: 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
LDPQ GER+ D CAAPG KTT IA+++ DEG +V D + ++ ++ A +G+ +
Sbjct: 94 LDPQPGERVWDTCAAPGSKTTQIAAMMDDEGVLVGNDNNLGRLSALRHNAERLGVTNLVV 153
Query: 317 YKLDA 321
DA
Sbjct: 154 SNQDA 158
>gi|448608995|ref|ZP_21660274.1| tRNA and rRNA cytosine-C5-methylase [Haloferax mucosum ATCC
BAA-1512]
gi|445747372|gb|ELZ98828.1| tRNA and rRNA cytosine-C5-methylase [Haloferax mucosum ATCC
BAA-1512]
Length = 313
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 16/115 (13%)
Query: 219 EGIA---VDMHNRIFQL---------PSFYDVLEGEIFLQNLPSIVTAHALDPQKGERIL 266
EG+A D H I +L P F+ L G+ + LP+I ALDPQ GERI
Sbjct: 48 EGVAYEPTDWHPGILKLENSSPGTNWPYFHGWLHGQEEVSALPAI----ALDPQPGERIW 103
Query: 267 DMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
D CAAPG KTT IA+++ DEG ++ D + ++ ++ A +G+ + DA
Sbjct: 104 DTCAAPGSKTTQIAAMMDDEGVLIGNDNNLGRLSALRHNAERLGVTNLVVSNQDA 158
>gi|448570932|ref|ZP_21639443.1| tRNA and rRNA cytosine-C5-methylase [Haloferax lucentense DSM
14919]
gi|445722850|gb|ELZ74501.1| tRNA and rRNA cytosine-C5-methylase [Haloferax lucentense DSM
14919]
Length = 313
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 16/125 (12%)
Query: 209 MSRAGIFRASEGIA---VDMHNRIFQL---------PSFYDVLEGEIFLQNLPSIVTAHA 256
++RA EG+A D H I +L P F+ L G+ + LP+I A
Sbjct: 38 VARAREALDDEGVAYEPTDWHPGILKLEDSSPGTNWPYFHGWLHGQEEVSALPAI----A 93
Query: 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
LDPQ GER+ D CAAPG KTT IA+++ DEG +V D + ++ ++ A +G+ +
Sbjct: 94 LDPQPGERVWDTCAAPGSKTTQIAAMMDDEGVLVGNDNNLGRLSALRHNAERLGVTNLVV 153
Query: 317 YKLDA 321
DA
Sbjct: 154 SNQDA 158
>gi|229140511|ref|ZP_04269066.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus
BDRD-ST26]
gi|228643072|gb|EEK99348.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus
BDRD-ST26]
Length = 360
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 143 KGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 202
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL + T LDA K NE+ D+
Sbjct: 203 RLIKQQAERLGLGNVETKALDARKVQEHFANETFDK 238
>gi|423574529|ref|ZP_17550648.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MSX-D12]
gi|423604508|ref|ZP_17580401.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD102]
gi|401212054|gb|EJR18800.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MSX-D12]
gi|401245128|gb|EJR51486.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD102]
Length = 444
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLGNVETKALDARKVQEHFANETFDK 322
>gi|373452533|ref|ZP_09544446.1| ribosomal RNA small subunit methyltransferase B [Eubacterium sp.
3_1_31]
gi|371966402|gb|EHO83892.1| ribosomal RNA small subunit methyltransferase B [Eubacterium sp.
3_1_31]
Length = 415
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
S+Y+ +G + +Q+ S + A+ +DPQ ERILD+CAAPG K+T +A L++DEGE++ D
Sbjct: 212 SWYE--DGMLSIQDEASQLVAYCVDPQPKERILDVCAAPGTKSTHMAELMQDEGEIICGD 269
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
++V IQ+ A + L I +DA K
Sbjct: 270 IHEHRVELIQQGADRLQLHSIHPVVMDATK 299
>gi|448585436|ref|ZP_21647829.1| tRNA and rRNA cytosine-C5-methylase [Haloferax gibbonsii ATCC
33959]
gi|445726136|gb|ELZ77753.1| tRNA and rRNA cytosine-C5-methylase [Haloferax gibbonsii ATCC
33959]
Length = 313
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 16/125 (12%)
Query: 209 MSRAGIFRASEGIA---VDMHNRIFQL---------PSFYDVLEGEIFLQNLPSIVTAHA 256
++RA EG+A D H I +L P F+ L G+ + LP+I A
Sbjct: 38 VARAREALDDEGVAYEPTDWHPGILKLEDSSPGTNWPYFHGWLHGQEEVSALPAI----A 93
Query: 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
LDPQ GER+ D CAAPG KTT IA+++ DEG +V D + ++ ++ A +G+ +
Sbjct: 94 LDPQPGERVWDTCAAPGSKTTQIAAMMDDEGVLVGNDNNLGRLSALRHNAERLGVTNLVV 153
Query: 317 YKLDA 321
DA
Sbjct: 154 SNQDA 158
>gi|42782957|ref|NP_980204.1| sun protein [Bacillus cereus ATCC 10987]
gi|42738884|gb|AAS42812.1| sun protein [Bacillus cereus ATCC 10987]
Length = 444
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLGNVETKALDARKVQEHFANETFDK 322
>gi|402556013|ref|YP_006597284.1| 16S rRNA methyltransferase B [Bacillus cereus FRI-35]
gi|401797223|gb|AFQ11082.1| 16S rRNA methyltransferase B [Bacillus cereus FRI-35]
Length = 444
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLGNVETKALDARKVQEHFANETFDK 322
>gi|206976730|ref|ZP_03237634.1| sun protein [Bacillus cereus H3081.97]
gi|206745040|gb|EDZ56443.1| sun protein [Bacillus cereus H3081.97]
Length = 444
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLGNVETKALDARKVQEHFANETFDK 322
>gi|384181679|ref|YP_005567441.1| 16S rRNA methyltransferase B [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324327763|gb|ADY23023.1| 16S rRNA methyltransferase B [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 444
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLGNVETKALDARKVQEHFANETFDK 322
>gi|284161369|ref|YP_003399992.1| RNA methylase [Archaeoglobus profundus DSM 5631]
gi|284011366|gb|ADB57319.1| RNA methylase, NOL1/NOP2/sun family [Archaeoglobus profundus DSM
5631]
Length = 445
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G+ +Q S + + LDP+ E ++D+CAAPGGKT +A L+R+ G + A D ++
Sbjct: 233 KGKFVVQEEASALASILLDPKPNETVVDLCAAPGGKTIHMAELMRNRGVIHAFDVDELRL 292
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLH-- 357
+++L G+K + YK+DA KAV ES + M ++ + T + ++
Sbjct: 293 KRMEELIKRCGVKIVKIYKMDARKAVDVLGESIADKVMLDAPCTSDGTLMKNPELRWRIR 352
Query: 358 ----KEVPSIAAEGLN-GDKSCKEKGRTCG-ECGMAQEE 390
+E+ + E LN G K KGR C + +EE
Sbjct: 353 EEKIEEIAQLQYELLNTGIDLLKPKGRILYCTCSIFREE 391
>gi|448624613|ref|ZP_21670561.1| tRNA and rRNA cytosine-C5-methylase [Haloferax denitrificans ATCC
35960]
gi|445749818|gb|EMA01260.1| tRNA and rRNA cytosine-C5-methylase [Haloferax denitrificans ATCC
35960]
Length = 313
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 16/125 (12%)
Query: 209 MSRAGIFRASEGIA---VDMHNRIFQL---------PSFYDVLEGEIFLQNLPSIVTAHA 256
++RA EG+A D H I +L P F+ L G+ + LP+I A
Sbjct: 38 VARAREALDDEGVAYEPTDWHPGILKLEDSSPGTNWPYFHGWLHGQEEVSALPAI----A 93
Query: 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
LDPQ GER+ D CAAPG KTT IA+++ DEG +V D + ++ ++ A +G+ +
Sbjct: 94 LDPQPGERVWDTCAAPGSKTTQIAAMMDDEGVLVGNDNNLGRLSALRHNAERLGVTNLVV 153
Query: 317 YKLDA 321
DA
Sbjct: 154 SNQDA 158
>gi|217961285|ref|YP_002339853.1| sun protein [Bacillus cereus AH187]
gi|222097310|ref|YP_002531367.1| sun protein [Bacillus cereus Q1]
gi|375285788|ref|YP_005106227.1| sun protein [Bacillus cereus NC7401]
gi|423353567|ref|ZP_17331194.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
IS075]
gi|423374338|ref|ZP_17351676.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AND1407]
gi|423567240|ref|ZP_17543487.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MSX-A12]
gi|217064955|gb|ACJ79205.1| sun protein [Bacillus cereus AH187]
gi|221241368|gb|ACM14078.1| sun protein [Bacillus cereus Q1]
gi|358354315|dbj|BAL19487.1| sun protein [Bacillus cereus NC7401]
gi|401089380|gb|EJP97551.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
IS075]
gi|401094250|gb|EJQ02332.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AND1407]
gi|401214328|gb|EJR21058.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MSX-A12]
Length = 444
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL + T LDA K NE+ D+
Sbjct: 287 RLIKQQAERLGLGNVETKALDARKVQEHFANETFDK 322
>gi|282901368|ref|ZP_06309293.1| Fmu, rRNA SAM-dependent methyltransferase [Cylindrospermopsis
raciborskii CS-505]
gi|281193647|gb|EFA68619.1| Fmu, rRNA SAM-dependent methyltransferase [Cylindrospermopsis
raciborskii CS-505]
Length = 446
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I LP F EG +Q+ + + H LDP+ GE I+D+CAAPGGKTT IA L+ D G+
Sbjct: 227 IQNLPGFT---EGWWCIQDAAAQLVGHLLDPRPGEVIIDVCAAPGGKTTHIAELMGDNGK 283
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ A DR+ +++ + + A + L+ I + D+
Sbjct: 284 IYACDRTPSRLRKLSENAQRLRLQSIEIFPGDS 316
>gi|307150080|ref|YP_003885464.1| sun protein [Cyanothece sp. PCC 7822]
gi|306980308|gb|ADN12189.1| sun protein [Cyanothece sp. PCC 7822]
Length = 450
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I QLP F EG +Q+ + + H LDPQ E I+D CAAPGGKTT IA L++D G
Sbjct: 229 ISQLPGFE---EGWWTVQDSSAQLVTHLLDPQPEEIIIDACAAPGGKTTHIAELMQDRGT 285
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCI 314
+ A DR +++ +Q+ A + L I
Sbjct: 286 IWACDRVASRLRKVQQNAQRLQLNSI 311
>gi|229197976|ref|ZP_04324690.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus m1293]
gi|228585455|gb|EEK43559.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus m1293]
Length = 360
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ +LD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 143 KGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 202
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL + T LDA K NE+ D+
Sbjct: 203 RLIKQQAERLGLGNVETKALDARKVQEHFANETFDK 238
>gi|337284681|ref|YP_004624155.1| fmu protein [Pyrococcus yayanosii CH1]
gi|334900615|gb|AEH24883.1| fmu protein [Pyrococcus yayanosii CH1]
Length = 451
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G+I +Q S V + LDP+ GE ++DM AAPGGKTT +A L++++G++ A D ++
Sbjct: 237 KGKIIVQEEASAVASLVLDPKPGEVVVDMAAAPGGKTTHLAELMKNKGKIYAFDIDEARM 296
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
+++ MG++ + K DA KA
Sbjct: 297 RRMKEFLKRMGIRIVKPIKKDARKA 321
>gi|313888508|ref|ZP_07822175.1| ribosomal RNA small subunit methyltransferase B [Peptoniphilus
harei ACS-146-V-Sch2b]
gi|312845537|gb|EFR32931.1| ribosomal RNA small subunit methyltransferase B [Peptoniphilus
harei ACS-146-V-Sch2b]
Length = 430
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 54/82 (65%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G ++Q+L SI+ + L+P K ++LD+CAAPGGKTT ++ L+ + GE+++ D+S K+
Sbjct: 227 KGHFYVQDLGSILVSTFLNPSKDSKVLDLCAAPGGKTTHLSELMDNTGEIISCDKSKGKI 286
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
I++ A +G I+ DA
Sbjct: 287 KLIKENAERLGCTNISPMVNDA 308
>gi|433422122|ref|ZP_20405923.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sp. BAB2207]
gi|448595829|ref|ZP_21653276.1| tRNA and rRNA cytosine-C5-methylase [Haloferax alexandrinus JCM
10717]
gi|432198703|gb|ELK54957.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sp. BAB2207]
gi|445742283|gb|ELZ93778.1| tRNA and rRNA cytosine-C5-methylase [Haloferax alexandrinus JCM
10717]
Length = 313
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 16/125 (12%)
Query: 209 MSRAGIFRASEGIA---VDMHNRIFQL---------PSFYDVLEGEIFLQNLPSIVTAHA 256
++RA EG+A D H I +L P F+ L G+ + LP+I A
Sbjct: 38 VARAREALDDEGVAYEPTDWHPGILKLEDSSPGTNWPYFHGWLHGQEEVSALPAI----A 93
Query: 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
LDPQ GER+ D CAAPG KTT IA+++ DEG +V D + ++ ++ A +G+ +
Sbjct: 94 LDPQPGERVWDTCAAPGSKTTQIAAMMDDEGVLVGNDNNLGRLSALRHNAERLGVTNLVV 153
Query: 317 YKLDA 321
DA
Sbjct: 154 SNQDA 158
>gi|448540796|ref|ZP_21623717.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sp. ATCC BAA-646]
gi|448549099|ref|ZP_21627875.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sp. ATCC BAA-645]
gi|448555726|ref|ZP_21631655.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sp. ATCC BAA-644]
gi|445708949|gb|ELZ60784.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sp. ATCC BAA-646]
gi|445713788|gb|ELZ65563.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sp. ATCC BAA-645]
gi|445717249|gb|ELZ68967.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sp. ATCC BAA-644]
Length = 313
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 16/125 (12%)
Query: 209 MSRAGIFRASEGIA---VDMHNRIFQL---------PSFYDVLEGEIFLQNLPSIVTAHA 256
++RA EG+A D H I +L P F+ L G+ + LP+I A
Sbjct: 38 VARAREALDDEGVAYEPTDWHPGILKLEDSSPGTNWPYFHGWLHGQEEVSALPAI----A 93
Query: 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
LDPQ GER+ D CAAPG KTT IA+++ DEG +V D + ++ ++ A +G+ +
Sbjct: 94 LDPQPGERVWDTCAAPGSKTTQIAAMMDDEGVLVGNDNNLGRLSALRHNAERLGVTNLVV 153
Query: 317 YKLDA 321
DA
Sbjct: 154 SNQDA 158
>gi|327400017|ref|YP_004340856.1| Fmu (Sun) domain-containing protein [Archaeoglobus veneficus SNP6]
gi|327315525|gb|AEA46141.1| Fmu (Sun) domain protein [Archaeoglobus veneficus SNP6]
Length = 440
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 55/84 (65%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G+ +Q+L S + AHA+ P+ GER+LD+ AAPG KT+ IA L+ + G+++AVD S +V
Sbjct: 228 DGKYVVQDLASTLVAHAMKPEPGERVLDLAAAPGLKTSHIAMLMENRGKIMAVDNSEERV 287
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
++ ++G++ + D +K
Sbjct: 288 RRMKAKMKKLGVEIVECRVADGVK 311
>gi|302392192|ref|YP_003828012.1| sun protein [Acetohalobium arabaticum DSM 5501]
gi|302204269|gb|ADL12947.1| sun protein [Acetohalobium arabaticum DSM 5501]
Length = 448
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
+FQ SF G +Q L SI+ H ++PQ + +LD+C+APGGKTT +A L+ ++GE
Sbjct: 225 LFQSNSF---TAGYFQIQGLASIIAGHIMNPQPKDIVLDLCSAPGGKTTHLAELMANQGE 281
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITT 316
+VA D +K+ I++ +G++ + T
Sbjct: 282 IVANDLHEDKLELIERNCNRLGIRIVRT 309
>gi|384244792|gb|EIE18290.1| S-adenosyl-L-methionine-dependent methyltransferase [Coccomyxa
subellipsoidea C-169]
Length = 453
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%)
Query: 243 IFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDI 302
+ LQ+ S + AHAL+PQ G +LD CAAPG KTT +A+L+ +G V+A D+ ++ +
Sbjct: 223 LILQSKASCMPAHALEPQPGWDVLDACAAPGNKTTHLAALMEGKGRVLAFDKDPKRLKRL 282
Query: 303 QKLAAEMGLKCITTYKLDALK 323
+ AA G CIT D L+
Sbjct: 283 KANAAATGADCITARVADFLQ 303
>gi|78185142|ref|YP_377577.1| Fmu, rRNA SAM-dependent methyltransferase [Synechococcus sp.
CC9902]
gi|78169436|gb|ABB26533.1| Fmu, rRNA SAM-dependent methyltransferase [Synechococcus sp.
CC9902]
Length = 445
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Query: 218 SEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
++G+ V H+ L ++ +EG +Q+ + A L+P+ G+R+LD CAAPGGK T
Sbjct: 219 ADGLQVLGHS--GDLRNWPGYVEGHWCVQDRAAQWVAPLLEPKPGDRVLDACAAPGGKAT 276
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
+A L+ D GE+ A+DRS ++ + AA +GL I DA + R + E N+
Sbjct: 277 HLAELMGDVGEIWAIDRSAGRLKRVAVNAARLGLGSIQALAADAAQLSRERPEWNE 332
>gi|255101745|ref|ZP_05330722.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile QCD-63q42]
Length = 441
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 11/137 (8%)
Query: 196 ERSGLYIGQGTAMMSRAGIF-RASE-GIA---VDMHNRIFQLPSFYDVLEGEIF------ 244
E+ +YI T +SR + + SE GI V M ++ ++ + E+F
Sbjct: 174 EKPSIYIRTNTLKISREELIEKLSEMGIVCLKVPMVEEAIKVEKMKNIEKNELFKAGLFT 233
Query: 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304
+Q++ S++ ++P++G ILD+C+APGGK+T +A+L+ + G+VVA D +K+ I
Sbjct: 234 IQDISSMIVGKVINPKEGSFILDVCSAPGGKSTHLATLMNNTGQVVARDIFEHKLKLINS 293
Query: 305 LAAEMGLKCITTYKLDA 321
+GLK + + DA
Sbjct: 294 TVNRLGLKNVFVERFDA 310
>gi|397906023|ref|ZP_10506850.1| Ribosomal RNA small subunit methyltransferase B [Caloramator
australicus RC3]
gi|397160937|emb|CCJ34185.1| Ribosomal RNA small subunit methyltransferase B [Caloramator
australicus RC3]
Length = 446
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 56/91 (61%)
Query: 231 QLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVV 290
Q+ + L+G ++Q+ S++ + L+P+ GE++LDMCAAPGGK T +A L+ + GE++
Sbjct: 221 QIEKMQEFLDGLFYVQDQSSMMASIILNPKPGEKVLDMCAAPGGKATHMAELMENTGEII 280
Query: 291 AVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
A D +K+ I + + +G+ I DA
Sbjct: 281 AFDVHEHKIDLINENSKRLGIGIIKPMLKDA 311
>gi|88809208|ref|ZP_01124717.1| Sun protein (Fmu protein) [Synechococcus sp. WH 7805]
gi|88787150|gb|EAR18308.1| Sun protein (Fmu protein) [Synechococcus sp. WH 7805]
Length = 430
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
Query: 209 MSRAGIFRASEGIAV-DMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILD 267
M A I +G+ V D + Q P F EG +Q+ + A L + G+R+LD
Sbjct: 197 MPTAPIPGCPDGLQVLDPAGDLRQWPGFD---EGYWCVQDRAAQWVAPLLAVEAGQRVLD 253
Query: 268 MCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR 327
CAAPGGK T +A L+ D+GEV AVDRS ++ + A+ +G CI DA + +++
Sbjct: 254 ACAAPGGKATHLAELMGDQGEVWAVDRSPGRLQRVAANASRLGSHCIHALAADASQLLQQ 313
Query: 328 KNE 330
+ +
Sbjct: 314 RPQ 316
>gi|78212348|ref|YP_381127.1| sun protein [Synechococcus sp. CC9605]
gi|78196807|gb|ABB34572.1| sun protein [Synechococcus sp. CC9605]
Length = 445
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 205 GTAMMSRAGIFRASEGIAVDMHN-RIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGE 263
A +S I +G+ + H+ + P + EG +Q+ + A LDP+ G+
Sbjct: 210 AAAGISSESIVGCPDGLRISGHSGDLRHWPGYA---EGHWCVQDCSAQWIAPVLDPKPGD 266
Query: 264 RILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
RILD CAAPGGK T +A L+ D+ E+ AVDRS ++ + AA +GL I
Sbjct: 267 RILDACAAPGGKATHLAELVGDQAEIWAVDRSAGRLKRVAANAARLGLASI 317
>gi|291543913|emb|CBL17022.1| ribosomal RNA small subunit methyltransferase RsmB [Ruminococcus
champanellensis 18P13]
Length = 434
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 14/121 (11%)
Query: 212 AGIFRASEGIAVDMHNRIFQLPSFYDVLEGEI-----------FLQNLPSIVTAHALDPQ 260
+ RA I+V+ H LP Y V G++ +Q+L S + ALDPQ
Sbjct: 189 SAFLRAMGEISVEKHP---LLPDCYRVQGGDVTRTDAFAQGMFHVQDLASQLCCLALDPQ 245
Query: 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
G+ +LD+CAAPGGK+ +A L+ D G++ A D N+V I + A + L+C+ D
Sbjct: 246 LGDTVLDLCAAPGGKSFTLAELMEDRGQLYAFDLHTNRVKLIAQGAQRLHLQCVHARTGD 305
Query: 321 A 321
A
Sbjct: 306 A 306
>gi|159118308|ref|XP_001709373.1| Nucleolar protein NOP2 [Giardia lamblia ATCC 50803]
gi|157437489|gb|EDO81699.1| Nucleolar protein NOP2 [Giardia lamblia ATCC 50803]
Length = 502
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G +Q+ S + AL P+ GERILDM AAPGGKTT + +L++D G ++A D +
Sbjct: 274 EYLRGYYMIQDAASFLPPMALSPKPGERILDMSAAPGGKTTHLGALMQDSGMILANDMNR 333
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDA 321
+++ +Q A MG+ C DA
Sbjct: 334 DRIPALQANLARMGVTCAVISCSDA 358
>gi|15920491|ref|NP_376160.1| Sun family protein [Sulfolobus tokodaii str. 7]
Length = 353
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G ++Q L S+V + LDP + + +LDM AAPG KTT +A L++++G +VAV++S
Sbjct: 130 EYLSGYYYIQGLASMVPPYVLDPNENDLVLDMAAAPGSKTTQLAQLMKNKGLIVAVEKSR 189
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDALKAVRRKN 329
++ + M +K + + DA + +R+ N
Sbjct: 190 ERIKSLYSNVNRMKIKNVVLLRADA-RILRKLN 221
>gi|217967819|ref|YP_002353325.1| sun protein [Dictyoglomus turgidum DSM 6724]
gi|217336918|gb|ACK42711.1| sun protein [Dictyoglomus turgidum DSM 6724]
Length = 430
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 57/83 (68%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ S++ A L+P+ G R++D+C+APG K+T +A L++++G++++VD + N++
Sbjct: 222 EGYFVIQSEASMLPALILNPKPGNRVIDLCSAPGLKSTHLAELMKNQGKIISVDINKNRL 281
Query: 300 MDIQKLAAEMGLKCITTYKLDAL 322
+++ A +G+ I T+ D L
Sbjct: 282 RLVEENAKRLGISIIETFSQDVL 304
>gi|423084336|ref|ZP_17072841.1| ribosomal RNA small subunit methyltransferase B [Clostridium
difficile 002-P50-2011]
gi|423088032|ref|ZP_17076417.1| ribosomal RNA small subunit methyltransferase B [Clostridium
difficile 050-P50-2011]
gi|357542641|gb|EHJ24683.1| ribosomal RNA small subunit methyltransferase B [Clostridium
difficile 002-P50-2011]
gi|357543560|gb|EHJ25577.1| ribosomal RNA small subunit methyltransferase B [Clostridium
difficile 050-P50-2011]
Length = 441
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 196 ERSGLYIGQGTAMMSRAGIF-RASE-GIA---VDMHNRIFQLPSFYDVLEGEIF------ 244
E+ +YI T +SR + + SE GI V M ++ ++ + E+F
Sbjct: 174 EKPSIYIRTNTLKISREELIEKLSEMGIVCLKVPMVEEAIKVEKMKNIEKNELFKAGLFT 233
Query: 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304
+Q++ S++ ++P++G +LD+C+APGGK+T +A+L+ + G+VVA D +K+ I+
Sbjct: 234 IQDISSMIVGKVINPKEGSFVLDVCSAPGGKSTHLATLMNNTGQVVARDIFEHKLKLIKS 293
Query: 305 LAAEMGLKCITTYKLDA 321
+GLK + + DA
Sbjct: 294 TVNRLGLKNVFVERFDA 310
>gi|354558670|ref|ZP_08977924.1| sun protein [Desulfitobacterium metallireducens DSM 15288]
gi|353545732|gb|EHC15182.1| sun protein [Desulfitobacterium metallireducens DSM 15288]
Length = 453
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 216 RASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGK 275
R E + ++ + +L SF EG +Q+ S + AH L+PQ G+ +LD CAAPGGK
Sbjct: 211 RVPESLVLENSGALDKLASFQ---EGLFAVQDESSQLVAHILNPQPGDIVLDACAAPGGK 267
Query: 276 TTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
TT +A ++++G+++A D +KV I +LA +G+ I DA
Sbjct: 268 TTHLAQKMKNQGKILAFDIHPHKVELIAQLAERLGITNIQAQAGDA 313
>gi|333978754|ref|YP_004516699.1| N utilization substance protein B [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822235|gb|AEG14898.1| N utilization substance protein B-like protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 453
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L SF EG +Q+ SI+ HAL P G R+LD AAPG KTT +A L+ D GE+ A
Sbjct: 226 LHSFAPFEEGLFLVQDESSILVGHALSPLPGARVLDAAAAPGTKTTHLAQLMGDRGEITA 285
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+D +K+ I +G+ C+ + DA
Sbjct: 286 LDIHPHKIKLIAANCRRLGITCVRPVEADA 315
>gi|342306137|dbj|BAK54226.1| RNA (m5C) methyltransferase [Sulfolobus tokodaii str. 7]
Length = 335
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G ++Q L S+V + LDP + + +LDM AAPG KTT +A L++++G +VAV++S
Sbjct: 112 EYLSGYYYIQGLASMVPPYVLDPNENDLVLDMAAAPGSKTTQLAQLMKNKGLIVAVEKSR 171
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDALKAVRRKN 329
++ + M +K + + DA + +R+ N
Sbjct: 172 ERIKSLYSNVNRMKIKNVVLLRADA-RILRKLN 203
>gi|448602998|ref|ZP_21656819.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sulfurifontis ATCC
BAA-897]
gi|445746194|gb|ELZ97656.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sulfurifontis ATCC
BAA-897]
Length = 313
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 16/125 (12%)
Query: 209 MSRAGIFRASEGIA---VDMHNRIFQL---------PSFYDVLEGEIFLQNLPSIVTAHA 256
++RA EG+A D H I +L P F+ L G+ + LP+I A
Sbjct: 38 VARAREALDDEGVAYEPTDWHPGILKLEDSSPGTNWPYFHGWLHGQEEVSALPAI----A 93
Query: 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
LDPQ GER+ D CAAPG KTT IA+++ DEG ++ D + ++ ++ A +G+ +
Sbjct: 94 LDPQPGERVWDTCAAPGSKTTQIAAMMDDEGVLIGNDNNLGRLSALRHNAERLGVTNLVV 153
Query: 317 YKLDA 321
DA
Sbjct: 154 SNQDA 158
>gi|317121758|ref|YP_004101761.1| sun protein [Thermaerobacter marianensis DSM 12885]
gi|315591738|gb|ADU51034.1| sun protein [Thermaerobacter marianensis DSM 12885]
Length = 511
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 233 PSFYDVL-EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
P+ D EG + Q+ S++ H LDP+ G+ ++D+ AAPGGK+T IA + D G VVA
Sbjct: 285 PAELDAFQEGALTWQDESSMLAVHVLDPRPGDLVVDVAAAPGGKSTHIAERMGDRGRVVA 344
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
D ++ + + A +GL CI LD K
Sbjct: 345 CDADPGRLEKVGEAARRLGLGCIEPLALDGRK 376
>gi|416350348|ref|ZP_11680855.1| 16S rRNA methyltransferase B [Clostridium botulinum C str.
Stockholm]
gi|338196305|gb|EGO88506.1| 16S rRNA methyltransferase B [Clostridium botulinum C str.
Stockholm]
Length = 443
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
E I ++ I P F D G++ +Q+ +++ A +D ++G +LD+C+APGGKTT
Sbjct: 212 EAIIINKGKSIESNPLFED---GKVTVQDESAMLVAATMDIKEGSLVLDLCSAPGGKTTH 268
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
I+ ++ + G+V+A D NK+ ++ A +G+ I KLDA K + E+ D
Sbjct: 269 ISEIMNNTGKVMAFDIHENKLSLVKDNAKRLGINNIECSKLDASKFNEKLKETAD 323
>gi|125973090|ref|YP_001037000.1| sun protein [Clostridium thermocellum ATCC 27405]
gi|256004593|ref|ZP_05429571.1| sun protein [Clostridium thermocellum DSM 2360]
gi|281417285|ref|ZP_06248305.1| sun protein [Clostridium thermocellum JW20]
gi|385779009|ref|YP_005688174.1| sun protein [Clostridium thermocellum DSM 1313]
gi|419721504|ref|ZP_14248667.1| sun protein [Clostridium thermocellum AD2]
gi|419725128|ref|ZP_14252181.1| sun protein [Clostridium thermocellum YS]
gi|125713315|gb|ABN51807.1| sun protein [Clostridium thermocellum ATCC 27405]
gi|255991465|gb|EEU01569.1| sun protein [Clostridium thermocellum DSM 2360]
gi|281408687|gb|EFB38945.1| sun protein [Clostridium thermocellum JW20]
gi|316940689|gb|ADU74723.1| sun protein [Clostridium thermocellum DSM 1313]
gi|380771449|gb|EIC05316.1| sun protein [Clostridium thermocellum YS]
gi|380782444|gb|EIC12079.1| sun protein [Clostridium thermocellum AD2]
Length = 455
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 53/82 (64%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +Q+ S++ A LDP+ GE ILD+C+APGGK+T IA ++++ G V++ D +K+
Sbjct: 238 KGYFQVQDESSMLVAKVLDPKPGETILDVCSAPGGKSTHIAQIMKNRGTVISRDIHEHKI 297
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
I++ +GL+ I T DA
Sbjct: 298 KLIEQAKERLGLEIIKTEVFDA 319
>gi|253682518|ref|ZP_04863315.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum D str. 1873]
gi|253562230|gb|EES91682.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum D str. 1873]
Length = 443
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
E I ++ I P F D G++ +Q+ +++ A +D ++G +LD+C+APGGKTT
Sbjct: 212 EAIIINKGKSIESNPLFED---GKVTVQDESAMLVAATMDIKEGSLVLDLCSAPGGKTTH 268
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
I+ ++ + G+V+A D NK+ ++ A +G+ I KLDA K + E+ D
Sbjct: 269 ISEIMNNTGKVMAFDIHENKLSLVKDNAKRLGINNIECSKLDASKFNEKLKETAD 323
>gi|209524134|ref|ZP_03272685.1| sun protein [Arthrospira maxima CS-328]
gi|376004062|ref|ZP_09781832.1| Ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Arthrospira sp. PCC
8005]
gi|423066085|ref|ZP_17054875.1| sun protein [Arthrospira platensis C1]
gi|209495509|gb|EDZ95813.1| sun protein [Arthrospira maxima CS-328]
gi|375327556|emb|CCE17585.1| Ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Arthrospira sp. PCC
8005]
gi|406712424|gb|EKD07610.1| sun protein [Arthrospira platensis C1]
Length = 458
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 215 FRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGG 274
+R S G+ I LP YD +G +Q+ + + + +DPQ GE I+D CAAPGG
Sbjct: 221 WRLSYGVGA-----IANLPG-YD--QGWWTVQDASAQLVGYVVDPQPGEIIIDACAAPGG 272
Query: 275 KTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDE 334
KTT IA L+ D G+++A+DRS ++ +Q+ + L+ I +S
Sbjct: 273 KTTHIAELMGDNGKIIAIDRSPGRLKPLQQNIKRLKLRSIQV----------EVGDSRHF 322
Query: 335 PNMCNSKDNNYITSQTSDSMKLHK 358
P N+ D + + S LH+
Sbjct: 323 PQYNNTADRVLLDAPCSGGGTLHR 346
>gi|448528893|ref|ZP_21620273.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum hochstenium
ATCC 700873]
gi|445710341|gb|ELZ62160.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum hochstenium
ATCC 700873]
Length = 321
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 222 AVDMHNRIFQLPS-----FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
AVD H+ +F+LP + + G Q S + ALDP+ GER+ D CAAPG KT
Sbjct: 54 AVDWHDGLFRLPDGNPGGNWPYVHGWTHGQEEVSALPGLALDPRPGERVWDACAAPGSKT 113
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
T IA + DEG VVA D + ++ ++ A +G+ DA
Sbjct: 114 TQIADAMDDEGTVVANDNNLGRLSALRHNAERLGITNAVVTNQDA 158
>gi|448439541|ref|ZP_21588105.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum
saccharovorum DSM 1137]
gi|445691075|gb|ELZ43270.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum
saccharovorum DSM 1137]
Length = 316
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 219 EGIA---VDMHNRIFQLPS-----FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCA 270
EG+A VD H+ +F+LP + + G Q S++ ALDP+ G+R+ D CA
Sbjct: 48 EGVAYEPVDWHDGLFRLPDGNPGGNWPYVHGWTHGQEEVSVLPGLALDPRPGDRVWDACA 107
Query: 271 APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
APG KTT IA + DEG VVA D + ++ ++ A +G+ DA
Sbjct: 108 APGSKTTQIADAMDDEGTVVANDNNLGRLSALRHNAERLGITNAIVTNQDA 158
>gi|254168829|ref|ZP_04875670.1| NOL1/NOP2/sun family, putative [Aciduliprofundum boonei T469]
gi|197622266|gb|EDY34840.1| NOL1/NOP2/sun family, putative [Aciduliprofundum boonei T469]
Length = 301
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G ++Q+L S+ AL+PQ+GE+ILDM AAPG KTT IA L+R EG +VA D + N++
Sbjct: 85 GYYYIQDLSSMAPVLALNPQRGEKILDMAAAPGSKTTMIAELMR-EGTIVANDINFNRLK 143
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
+ +G+ + K DA K
Sbjct: 144 SLGGNLERLGITNVIITKKDAKKG 167
>gi|218778410|ref|YP_002429728.1| sun protein [Desulfatibacillum alkenivorans AK-01]
gi|218759794|gb|ACL02260.1| sun protein [Desulfatibacillum alkenivorans AK-01]
Length = 455
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
+F+LP F EG+ +Q+ S +TA LDP+ GE++LD CA G KT+ IA L+ + GE
Sbjct: 232 VFELPGFS---EGKFSVQDAASQMTALCLDPRPGEKVLDACAGLGSKTSHIAQLMENTGE 288
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
++A D K+ +++ A + + + T+ LD
Sbjct: 289 ILAADLEPGKLKKLEEEMARLKVSIVKTHALD 320
>gi|374307505|ref|YP_005053936.1| ribosomal RNA small subunit methyltransferase B [Filifactor alocis
ATCC 35896]
gi|291166482|gb|EFE28528.1| ribosomal RNA small subunit methyltransferase B [Filifactor alocis
ATCC 35896]
Length = 440
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
L+G +Q++ S+ AL P+ GE+ILD+CAAPGGKTTAIA ++ ++G V + D+ NK
Sbjct: 230 LKGYFTIQDISSVCCIKALSPKTGEKILDICAAPGGKTTAIAEIIGEKGIVFSNDKGVNK 289
Query: 299 VMDIQKLAAEMGLKCITTYKLDA 321
+ I + A + L I +DA
Sbjct: 290 LNLISQSAKRLCLDNIELSDIDA 312
>gi|403378883|ref|ZP_10920940.1| 16S rRNA methyltransferase B [Paenibacillus sp. JC66]
Length = 457
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ S++ A+DP+ G +LD CAAPGGKTT +A L+ D+G V+ D +K
Sbjct: 240 EGLFTIQDESSMLVGEAVDPRPGMSVLDCCAAPGGKTTHMAELMNDQGMVIGCDIHEHKE 299
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
I+K A +GL I T DA
Sbjct: 300 ALIRKQAQRLGLTSIQTLAADA 321
>gi|297544782|ref|YP_003677084.1| sun protein [Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296842557|gb|ADH61073.1| sun protein [Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 444
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 10/119 (8%)
Query: 208 MMSRAGIFRA----SEGIAVDMHNRIFQLPSFYDVL-EGEIFLQNLPSIVTAHALDPQKG 262
++SR +++ E + +D+ N P + + EG I++Q+ S++ + L+P +G
Sbjct: 195 LVSRGIVYKKGYYLEEALYIDIKN-----PESHQLYKEGLIYIQDEASMLVSKILNPNEG 249
Query: 263 ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
E +LD+CAAPGGKTT IA L+++ G VVA D +++ I++ +G+ + D+
Sbjct: 250 ETVLDVCAAPGGKTTHIAQLMKNTGNVVAFDLHPHRLELIKENCKRLGITNVKAEAFDS 308
>gi|289578506|ref|YP_003477133.1| sun protein [Thermoanaerobacter italicus Ab9]
gi|289528219|gb|ADD02571.1| sun protein [Thermoanaerobacter italicus Ab9]
Length = 444
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 10/119 (8%)
Query: 208 MMSRAGIFRA----SEGIAVDMHNRIFQLPSFYDVL-EGEIFLQNLPSIVTAHALDPQKG 262
++SR +++ E + +D+ N P + + EG I++Q+ S++ + L+P +G
Sbjct: 195 LVSRGIVYKKGYYLEEALYIDIKN-----PESHQLYKEGLIYIQDEASMLVSKILNPNEG 249
Query: 263 ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
E +LD+CAAPGGKTT IA L+++ G VVA D +++ I++ +G+ + D+
Sbjct: 250 ETVLDVCAAPGGKTTHIAQLMKNTGNVVAFDLHPHRLELIKENCKRLGITNVKAEAFDS 308
>gi|254976172|ref|ZP_05272644.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile QCD-66c26]
gi|255315305|ref|ZP_05356888.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile QCD-76w55]
gi|255517973|ref|ZP_05385649.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile QCD-97b34]
gi|255651089|ref|ZP_05397991.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile QCD-37x79]
gi|260684154|ref|YP_003215439.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile CD196]
gi|260687813|ref|YP_003218947.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile R20291]
gi|306520940|ref|ZP_07407287.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile QCD-32g58]
gi|384361796|ref|YP_006199648.1| 16S rRNA methyltransferase B [Clostridium difficile BI1]
gi|423092611|ref|ZP_17080415.1| ribosomal RNA small subunit methyltransferase B [Clostridium
difficile 70-100-2010]
gi|260210317|emb|CBA64638.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile CD196]
gi|260213830|emb|CBE05814.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile R20291]
gi|357553481|gb|EHJ35228.1| ribosomal RNA small subunit methyltransferase B [Clostridium
difficile 70-100-2010]
Length = 441
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 75/137 (54%), Gaps = 11/137 (8%)
Query: 196 ERSGLYIGQGTAMMSRAGIF-RASE-GIA---VDMHNRIFQLPSFYDVLEGEIF------ 244
E+ +YI T +SR + + SE GI V M ++ ++ + E+F
Sbjct: 174 EKPSIYIRTNTLKISREELIEKLSEMGIVCLKVPMVEEAIKVEKMKNIEKNELFKAGLFT 233
Query: 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304
+Q++ S++ ++P++G +LD+C+APGGK+T +A+L+ + G+VVA D +K+ I
Sbjct: 234 IQDISSMIVGKVINPKEGSFVLDVCSAPGGKSTHLATLMNNTGQVVARDIFEHKLKLINS 293
Query: 305 LAAEMGLKCITTYKLDA 321
+GLK + + DA
Sbjct: 294 TVNRLGLKNVFVERFDA 310
>gi|345859751|ref|ZP_08812085.1| transcription antitermination factor NusB [Desulfosporosinus sp.
OT]
gi|344327208|gb|EGW38652.1| transcription antitermination factor NusB [Desulfosporosinus sp.
OT]
Length = 451
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 175 WGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQ--- 231
WGL T +++ + + L I + +M R EGI V++ RI +
Sbjct: 162 WGLEETEALCRANNESAQTWIRTNTLKISR-EDLMDRL----TQEGITVEVGTRIPESLR 216
Query: 232 ------LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD 285
L EG +Q+ S + AH + P+ G+ +LD C+APGGKTT +A ++ +
Sbjct: 217 IQNFGSLERVESFCEGLFTVQDESSQLVAHVVAPKPGQNVLDACSAPGGKTTHLAQMMGN 276
Query: 286 EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
EGE++A D +K+ I +LA +G+ I DA
Sbjct: 277 EGEILAFDVHAHKLEFIDQLAQRLGITIIQPQLGDA 312
>gi|126700200|ref|YP_001089097.1| 16S rRNA methyltransferase B [Clostridium difficile 630]
gi|115251637|emb|CAJ69470.1| Ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Clostridium
difficile 630]
Length = 441
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 75/137 (54%), Gaps = 11/137 (8%)
Query: 196 ERSGLYIGQGTAMMSRAGIF-RASE-GIA---VDMHNRIFQLPSFYDVLEGEIF------ 244
E+ +YI T +SR + + SE GI V M ++ ++ + E+F
Sbjct: 174 EKPSIYIRTNTLKISREELIEKLSEMGIVCLKVPMVEEAIKVEKMKNIEKNELFKAGLFT 233
Query: 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304
+Q++ S++ ++P++G +LD+C+APGGK+T +A+L+ + G+VVA D +K+ I
Sbjct: 234 IQDISSMIVGKVINPKEGSFVLDVCSAPGGKSTHLATLMNNTGQVVARDIFEHKLKLINS 293
Query: 305 LAAEMGLKCITTYKLDA 321
+GLK + + DA
Sbjct: 294 TVNRLGLKNVFVERFDA 310
>gi|20094975|ref|NP_614822.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
gi|19888229|gb|AAM02752.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
Length = 450
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 67/112 (59%), Gaps = 10/112 (8%)
Query: 214 IFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPG 273
I + EG+ I ++P + EG +Q+ + + + L+P+ GE ++D+CAAPG
Sbjct: 220 ILKIPEGLP------IGEMPEWE---EGLFVIQDEAAALASAVLNPKPGEVVVDLCAAPG 270
Query: 274 GKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG-LKCITTYKLDALKA 324
GKTT +A L+ EG++VA+D ++ ++++A MG L CI T+ +D +A
Sbjct: 271 GKTTHMAQLMGGEGKIVAIDVDEVRMERLREIAERMGVLDCIETHLMDGREA 322
>gi|19074454|ref|NP_585960.1| NOP2-LIKE NUCLEOLAR PROTEIN [Encephalitozoon cuniculi GB-M1]
gi|19069096|emb|CAD25564.1| NOP2-LIKE NUCLEOLAR PROTEIN [Encephalitozoon cuniculi GB-M1]
gi|449330099|gb|AGE96363.1| nop2-like nucleolar protein [Encephalitozoon cuniculi]
Length = 364
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 53/84 (63%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G+ +QN+ S + AH LDP++G R++D C+APG KT+ +A ++R+ G++ A +RS N+
Sbjct: 156 GKFVIQNISSCLPAHILDPEEGSRVIDTCSAPGNKTSQLAMIMRNTGKIYAFERSKNRAE 215
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
++ ++G+ + D + A
Sbjct: 216 TLRAQLFKLGVSNTEVVEDDFMNA 239
>gi|432108174|gb|ELK33094.1| Putative methyltransferase NSUN6 [Myotis davidii]
Length = 177
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 34/41 (82%)
Query: 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDE 286
QNLPS V H LDPQ GE+ILD+CAAPGGKTT IA+L+ D+
Sbjct: 20 QNLPSAVVTHVLDPQPGEKILDLCAAPGGKTTHIAALMHDQ 60
>gi|160933495|ref|ZP_02080883.1| hypothetical protein CLOLEP_02341 [Clostridium leptum DSM 753]
gi|156867372|gb|EDO60744.1| ribosomal RNA small subunit methyltransferase B [Clostridium leptum
DSM 753]
Length = 446
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
+ + ++ I L SF D G +Q+L S + AL P+ GER+ D+CAAPGGKT
Sbjct: 215 QALTLERSGSIESLSSFQD---GFFHVQDLASQLCCQALSPKPGERVYDVCAAPGGKTFT 271
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+A L+ ++GE+ + D KV IQ+ A +GL + DA
Sbjct: 272 MAELMENQGELSSFDLYPAKVKLIQQGAKRLGLSVVNARIRDA 314
>gi|428781149|ref|YP_007172935.1| ribosomal RNA small subunit methyltransferase RsmB
[Dactylococcopsis salina PCC 8305]
gi|428695428|gb|AFZ51578.1| ribosomal RNA small subunit methyltransferase RsmB
[Dactylococcopsis salina PCC 8305]
Length = 445
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I QLP F EG +Q+ + + ++ L+PQ GE I+D CAAPGGKTT IA L+ D+G
Sbjct: 225 IQQLPGFS---EGWWTVQDFSAQLVSYLLNPQPGETIIDACAAPGGKTTHIAELMGDDGL 281
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITT 316
+ A+DR+ +++ + A + K I T
Sbjct: 282 IWALDRASSRLKKVISNAERLQHKSIKT 309
>gi|448478964|ref|ZP_21603970.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum arcis JCM
13916]
gi|445822794|gb|EMA72556.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum arcis JCM
13916]
Length = 309
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Query: 223 VDMHNRIFQLPS-----FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
VD H+ +F+LP + + G Q S++ ALDP+ GER+ D CAAPG KTT
Sbjct: 55 VDWHDGLFRLPDGNPGGNWPYVHGWTHGQEEVSVLPTLALDPRPGERVWDACAAPGSKTT 114
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
IA + DEG VVA D + ++ ++ A +G+ DA
Sbjct: 115 QIADAMDDEGTVVANDNNLGRLSALRHNAERLGITNAIVTNQDA 158
>gi|448424074|ref|ZP_21582200.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum terrestre
JCM 10247]
gi|445682739|gb|ELZ35152.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum terrestre
JCM 10247]
Length = 309
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Query: 223 VDMHNRIFQLPS-----FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
VD H+ +F+LP + + G Q S++ ALDP+ GER+ D CAAPG KTT
Sbjct: 55 VDWHDGLFRLPDGNPGGNWPYVHGWTHGQEEVSVLPTLALDPRPGERVWDACAAPGSKTT 114
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
IA + DEG VVA D + ++ ++ A +G+ DA
Sbjct: 115 QIADAMDDEGTVVANDNNLGRLSALRHNAERLGITNAIVTNQDA 158
>gi|448512219|ref|ZP_21616333.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum distributum
JCM 9100]
gi|448520842|ref|ZP_21618175.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum distributum
JCM 10118]
gi|445694539|gb|ELZ46664.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum distributum
JCM 9100]
gi|445702978|gb|ELZ54917.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum distributum
JCM 10118]
Length = 309
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Query: 223 VDMHNRIFQLPS-----FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
VD H+ +F+LP + + G Q S++ ALDP+ GER+ D CAAPG KTT
Sbjct: 55 VDWHDGLFRLPDGNPGGNWPYVHGWTHGQEEVSVLPTLALDPRPGERVWDACAAPGSKTT 114
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
IA + DEG VVA D + ++ ++ A +G+ DA
Sbjct: 115 QIADAMDDEGTVVANDNNLGRLSALRHNAERLGITNAIVTNQDA 158
>gi|145219990|ref|YP_001130699.1| sun protein [Chlorobium phaeovibrioides DSM 265]
gi|145206154|gb|ABP37197.1| sun protein [Chlorobium phaeovibrioides DSM 265]
Length = 445
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +QN ++ L+P G +LDMCAAPGGKT A+A L+ +EG + A+D K
Sbjct: 230 GLVSVQNPTQLLACLLLNPTPGSEVLDMCAAPGGKTAALAELMGNEGHITALDIYEQKTN 289
Query: 301 DIQKLAAEMGLKCITTYKLDA 321
I++LA +G+ IT DA
Sbjct: 290 KIRRLAETLGISIITALTDDA 310
>gi|65321192|ref|ZP_00394151.1| COG0144: tRNA and rRNA cytosine-C5-methylases [Bacillus anthracis
str. A2012]
Length = 444
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P +G+ ILD CAAPGGKTT IA L+ G+V+++D +KV
Sbjct: 227 KGFLSIQDESSMLVARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKV 286
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ A + L+ + T LDA K
Sbjct: 287 RLIKQQAERLXLENVETKALDARK 310
>gi|310659156|ref|YP_003936877.1| RsmB [[Clostridium] sticklandii]
gi|308825934|emb|CBH21972.1| RsmB [[Clostridium] sticklandii]
Length = 444
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 56/83 (67%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
++G +Q+L S++ AL+P G+ +LD+C+APGGK+ IA L+ ++G++ ++D S +K
Sbjct: 240 VKGGFVIQDLSSMLAVKALNPLPGDTVLDICSAPGGKSFYIADLMENKGQLDSMDISEHK 299
Query: 299 VMDIQKLAAEMGLKCITTYKLDA 321
+ ++K A E+G+ I +DA
Sbjct: 300 IQMLKKRAVELGVDIINARVMDA 322
>gi|291526150|emb|CBK91737.1| ribosomal RNA small subunit methyltransferase RsmB [Eubacterium
rectale DSM 17629]
Length = 469
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 11/114 (9%)
Query: 218 SEGI---AVDMHNRIFQLPSFYDVL-------EGEIFLQNLPSIVTAHALDPQKGERILD 267
+EG+ AVD N F + F D L +G ++Q++ S++ A P+KG+ ++D
Sbjct: 231 AEGVTVTAVDELNYAFVISGF-DYLNGLQSFRDGLFYVQDISSMLVAQTAAPKKGDYVID 289
Query: 268 MCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+CAAPGGK+T IA LLR G V A D + NKV I++ GL ++ DA
Sbjct: 290 VCAAPGGKSTHIAELLRGSGHVFARDLTDNKVDMIEENIDRHGLNNMSAEVWDA 343
>gi|194336038|ref|YP_002017832.1| sun protein [Pelodictyon phaeoclathratiforme BU-1]
gi|194308515|gb|ACF43215.1| sun protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 445
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 208 MMSRAGIFRASEGIAVDMH-----NRIFQLPSFYD----VLEGEIFLQNLPSIVTAHALD 258
+ + AG F + +A MH + IF F V++G + +QN + L
Sbjct: 188 LKNSAGRFFSDPAMAAVMHEESGIDNIFLSKDFNAFEPAVIDGRLTVQNPTQALACLLLH 247
Query: 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318
P G +LD+CAAPGGK T +A L+ + G++ AVDR K+ I+ A +G+ I T
Sbjct: 248 PAPGSNVLDLCAAPGGKATFMAELMENRGQITAVDRYEQKLEKIESHAEALGITIIKTVM 307
Query: 319 LDA 321
DA
Sbjct: 308 EDA 310
>gi|14590712|ref|NP_142782.1| fmu protein [Pyrococcus horikoshii OT3]
gi|186972907|pdb|2YXL|A Chain A, Crystal Structure Of Ph0851
gi|3257262|dbj|BAA29945.1| 450aa long hypothetical fmu protein [Pyrococcus horikoshii OT3]
Length = 450
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+I +Q S V + LDP+ GE ++D+ AAPGGKTT +A L++++G++ A D ++
Sbjct: 238 EGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRM 297
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
++ MG+K + DA KA
Sbjct: 298 KRLKDFVKRMGIKIVKPLVKDARKA 322
>gi|448474110|ref|ZP_21602078.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum aidingense
JCM 13560]
gi|445818390|gb|EMA68249.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum aidingense
JCM 13560]
Length = 310
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 219 EGIA---VDMHNRIFQLPS-----FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCA 270
EG+A V+ H+ +F+LP + + G Q S++ ALDPQ GER+ D CA
Sbjct: 48 EGVAYEPVEWHDGLFRLPDGNPGGNWPYVHGWTHGQEEVSVLPGLALDPQPGERVWDACA 107
Query: 271 APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
APG KTT IA + D+G VVA D + ++ ++ A +G+ DA
Sbjct: 108 APGSKTTQIADAMDDDGTVVANDNNLGRLSALRHNAERLGVTNAIVTNQDA 158
>gi|448448406|ref|ZP_21591219.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum litoreum
JCM 13561]
gi|445814822|gb|EMA64780.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum litoreum
JCM 13561]
Length = 309
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Query: 223 VDMHNRIFQLPS-----FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
VD H+ +F+LP + + G Q S++ ALDP+ GER+ D CAAPG KTT
Sbjct: 55 VDWHDGLFRLPDGNPGGNWPYVHGWTHGQEEVSVLPTLALDPRPGERVWDACAAPGSKTT 114
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
IA + DEG VVA D + ++ ++ A +G+ DA
Sbjct: 115 QIADAMDDEGTVVANDNNLGRLSALRHNAERLGITNAIVTNQDA 158
>gi|229180141|ref|ZP_04307485.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
172560W]
gi|228603350|gb|EEK60827.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
172560W]
Length = 429
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL+P G+ +LD CAAPGGKT IA L+ G+V+++D +KV
Sbjct: 212 KGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTAHIAERLKGTGKVMSLDLHAHKV 271
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDE 334
I++ A +GL+ + T LDA K NE+ D+
Sbjct: 272 RLIKQQAERLGLENVETKALDARKVQEHFANETFDK 307
>gi|238019375|ref|ZP_04599801.1| hypothetical protein VEIDISOL_01239 [Veillonella dispar ATCC 17748]
gi|237864074|gb|EEP65364.1| hypothetical protein VEIDISOL_01239 [Veillonella dispar ATCC 17748]
Length = 451
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 238 VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297
V++G I + S++ AH +DPQ GERILD CAAPGGK+ +ASL+ + G +++ D +
Sbjct: 238 VIDGHITFMDKASMLVAHVVDPQPGERILDCCAAPGGKSMHMASLMNNTGAIMSCDIYDH 297
Query: 298 KVMDIQKLAAEMGLKCITT 316
K+ + A +G+ ++T
Sbjct: 298 KLDLMNHNAQRLGVSIVST 316
>gi|448591436|ref|ZP_21650924.1| tRNA and rRNA cytosine-C5-methylase [Haloferax elongans ATCC
BAA-1513]
gi|445733410|gb|ELZ84979.1| tRNA and rRNA cytosine-C5-methylase [Haloferax elongans ATCC
BAA-1513]
Length = 313
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 16/125 (12%)
Query: 209 MSRAGIFRASEGIA---VDMHNRIFQL---------PSFYDVLEGEIFLQNLPSIVTAHA 256
++RA EG+A D H I +L P F+ L G+ + LP+I A
Sbjct: 38 VARAREALDDEGVAYEPTDWHPGILKLEDSSPGTNWPYFHGWLHGQEEVSALPAI----A 93
Query: 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
LDPQ GE++ D CAAPG KTT IA+++ DEG +V D + ++ ++ A +G+ +
Sbjct: 94 LDPQPGEKVWDTCAAPGSKTTQIAAMMDDEGVLVGNDNNLGRLSALRHNAERLGVTNLAV 153
Query: 317 YKLDA 321
DA
Sbjct: 154 TNQDA 158
>gi|282882115|ref|ZP_06290756.1| ribosomal RNA small subunit methyltransferase B [Peptoniphilus
lacrimalis 315-B]
gi|281298145|gb|EFA90600.1| ribosomal RNA small subunit methyltransferase B [Peptoniphilus
lacrimalis 315-B]
Length = 430
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
+ + ++ IF +F EG + Q+ SI + L+P+K ILD+CAAPGGK+T
Sbjct: 209 DSLIIENPKNIFDTQAF---REGFFYAQDFSSIKVSQILNPKKNSTILDLCAAPGGKSTH 265
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338
+ ++L + G++VA D+S K+ I+ A +G+ I K+ A + N+ D+ + C
Sbjct: 266 LGAILENTGQIVACDKSLYKLDLIKDNAKRLGVSNI---KVSINDASKYNNDFEDKFDYC 322
>gi|33862543|ref|NP_894103.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. MIT 9313]
gi|33640656|emb|CAE20445.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. MIT 9313]
Length = 451
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
+ Q P + +G +Q+ S + A L PQ G+RILD CAAPGGK T + L+ GE
Sbjct: 241 LSQWPGYQ---QGHWCVQDRSSQLVAPLLRPQPGDRILDACAAPGGKATHLVELMGGSGE 297
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
V AVDRS ++ + AA +G C+ DA
Sbjct: 298 VWAVDRSAGRLKRLADNAARLGGDCLNALVADA 330
>gi|347750545|ref|YP_004858110.1| sun protein [Bacillus coagulans 36D1]
gi|347583063|gb|AEO99329.1| sun protein [Bacillus coagulans 36D1]
Length = 447
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 67/126 (53%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ S+ A+AL Q+G+RILD CAAPGGKTT IA L GEVVA+D +KV
Sbjct: 230 EGLFTIQDESSMAVAYALCIQEGQRILDACAAPGGKTTHIAEKLEGTGEVVALDLHPHKV 289
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKE 359
+Q+ A +G + +D+ A R ++ + + ++ + + +K K
Sbjct: 290 KLVQENAERLGTGQVEAIAMDSRDAGARFEKNTFDRILVDAPCTGFGVLRRKPDIKYAKT 349
Query: 360 VPSIAA 365
V I A
Sbjct: 350 VDDIHA 355
>gi|124025193|ref|YP_001014309.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. NATL1A]
gi|123960261|gb|ABM75044.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. NATL1A]
Length = 448
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+ +Q+ S + A +L P GE+ILD CAAPGGK+T IA L+ +EG + +VDRS +
Sbjct: 243 EGKWSVQDRSSQLIAPSLGPLPGEKILDACAAPGGKSTHIAELINNEGNLWSVDRSSRRS 302
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRK 328
I + +G KC+ D+ + + +K
Sbjct: 303 KKILANSERLGTKCLQILVADSNELLLKK 331
>gi|260434429|ref|ZP_05788399.1| ribosomal RNA small subunit methyltransferase B [Synechococcus sp.
WH 8109]
gi|260412303|gb|EEX05599.1| ribosomal RNA small subunit methyltransferase B [Synechococcus sp.
WH 8109]
Length = 445
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ + A LDP+ G+RILD CAAPGGK T +A L+ D+ E+ AVDRS ++
Sbjct: 243 EGHWCVQDCSAQWIAPLLDPKPGDRILDACAAPGGKATHLAELVGDQAEIWAVDRSAGRL 302
Query: 300 MDIQKLAAEMGLKCI 314
+ AA +GL I
Sbjct: 303 KRVVANAARLGLASI 317
>gi|218439986|ref|YP_002378315.1| sun protein [Cyanothece sp. PCC 7424]
gi|218172714|gb|ACK71447.1| sun protein [Cyanothece sp. PCC 7424]
Length = 452
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I QLP F EG +Q+ + + H LDPQ E I+D CAAPGGKTT IA L+ D G
Sbjct: 230 IQQLPGFE---EGWWTVQDSSAQLVTHLLDPQPDEIIIDACAAPGGKTTHIAQLMGDRGT 286
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCI 314
+ A DR +++ +Q+ A + L I
Sbjct: 287 IWACDRVPSRLRKVQQNAERLQLNSI 312
>gi|407407219|gb|EKF31135.1| nucleolar protein, putative [Trypanosoma cruzi marinkellei]
Length = 574
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 90/206 (43%), Gaps = 43/206 (20%)
Query: 126 VIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVL 185
V+V+ CAEAVLRG+ V+ PGV++ G V V V + QP G+
Sbjct: 136 VVVNVGCAEAVLRGSDVFAPGVVSFVGSFVAGQGVFVGVYL-QP----------ANGSTS 184
Query: 186 QGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASE-GIAVDMHNRIFQLPS---FYDVLEG 241
G +TD + L +G GTAMM R I R + G+AV M+ PS +L+
Sbjct: 185 TGGRTDG---KSLFLCVGAGTAMMDRREIIRGRQNGVAVRMNWTPMAQPSKSLLSTMLDA 241
Query: 242 --------------EIFLQNLPSIVTAHALDPQKGE---------RILDMCAAPGGKTTA 278
FLQN S+V L Q LD CAAPGGKT+
Sbjct: 242 AMDTRLKTGIAETSNFFLQNYSSMVAVDVLVQQFFSINIQRDGPLAFLDACAAPGGKTSL 301
Query: 279 IASLLRD--EGEVVAVDRSHNKVMDI 302
+ SLL + +G ++ + NK D
Sbjct: 302 LLSLLHEKAQGLDFYLENNDNKSSDF 327
>gi|293402263|ref|ZP_06646401.1| ribosomal RNA small subunit methyltransferase B
[Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304370|gb|EFE45621.1| ribosomal RNA small subunit methyltransferase B
[Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 415
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
S+Y ++G + +Q+ S + A+ +DPQ ERILD+CAAPG K+T +A L++DEGE++ D
Sbjct: 212 SWY--VDGMLSIQDEASQLVAYCVDPQPKERILDVCAAPGTKSTHMAELMQDEGEIICGD 269
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
++V IQ+ A + L I +DA
Sbjct: 270 IHEHRVELIQQGADRLQLHSIHPIVMDA 297
>gi|373454494|ref|ZP_09546360.1| ribosomal RNA small subunit methyltransferase B [Dialister
succinatiphilus YIT 11850]
gi|371935769|gb|EHO63512.1| ribosomal RNA small subunit methyltransferase B [Dialister
succinatiphilus YIT 11850]
Length = 448
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 68/111 (61%), Gaps = 7/111 (6%)
Query: 208 MMSRAGIFRASEGIAVDMHNRIFQLP---SFYDVLE-GEIFLQNLPSIVTAHALDPQKGE 263
MM+ GI +E + D +N + L +F+ + E G ++Q+L S++ A L P++G+
Sbjct: 205 MMAEKGI--KTEAVPWD-NNALILLEGAHAFWPLAEEGLAYVQSLSSMIPAAILSPKEGD 261
Query: 264 RILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
R+LDMCAAPG KTT +A ++++ G + A D +K+ I+ A ++G+ I
Sbjct: 262 RVLDMCAAPGSKTTQMAEMMKNNGTIDAWDLYPHKISLIKNNAKKLGISII 312
>gi|315646179|ref|ZP_07899299.1| sun protein [Paenibacillus vortex V453]
gi|315278378|gb|EFU41694.1| sun protein [Paenibacillus vortex V453]
Length = 460
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G I +Q+ S++ A A+ P+ G R+LD CAAPGGK+ + L++DEG ++A D +K
Sbjct: 241 DGLISIQDESSMLVAEAIQPEPGMRVLDCCAAPGGKSAHMGELMKDEGSIIANDIHTHKG 300
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR 327
I A+ +GL I T DAL R
Sbjct: 301 KLISDQASRLGLDSIMTVTGDALDLADR 328
>gi|390453286|ref|ZP_10238814.1| ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Paenibacillus
peoriae KCTC 3763]
Length = 471
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L S+Y +G + +Q+ S++ A A+ P+ G +LD CAAPGGKT +A L++D+G ++A
Sbjct: 248 LTSWY--TDGLLSVQDESSMLVAEAVAPEPGMLVLDCCAAPGGKTAHMAELMKDQGRIIA 305
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
D +K IQ+ A +GL+ + T DAL+
Sbjct: 306 NDLHAHKHHLIQEQADRLGLEAVETVTGDALE 337
>gi|145590277|ref|YP_001152279.1| PUA domain-containing protein [Pyrobaculum arsenaticum DSM 13514]
gi|145282045|gb|ABP49627.1| PUA domain containing protein [Pyrobaculum arsenaticum DSM 13514]
Length = 377
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 117/285 (41%), Gaps = 68/285 (23%)
Query: 33 SRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTIS 92
S + LT P Y IRVNT K T +++I++L +++G IS
Sbjct: 27 SMLRSVLTPPQRY-YIRVNTTKITPNELIKRL----------------NLRG------IS 63
Query: 93 ESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSS 152
+ E V+ GP I K V+V +K AE+++ GA +Y P ++ +
Sbjct: 64 AYKDEVFEDAVWFPVEGPFKIPSA------KKIVVVDKKAAESIMLGADLYGPAIIK-TD 116
Query: 153 HVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRA 212
V+ G+ V + +G+ + G A+M+
Sbjct: 117 PVKSGEEVNI--------------------------------VSDNGVLVAYGKAVMNSD 144
Query: 213 GIFRASEGIAVDMHNRIFQLPSFYDV---LEGEIFLQNLPSIVTAHALDPQKGERILDMC 269
R+ G+ V + +++ P ++ EG + Q+LP+I H ++D+
Sbjct: 145 EALRSRRGLFVQVEKSLYKAPKLRNLPEYAEGLFYSQSLPAIAVGHIARKFAQRSVVDLN 204
Query: 270 AAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
AAPGGK T +A V+AVDRS K+ ++ +GL +
Sbjct: 205 AAPGGKATHLAQY---GIHVIAVDRSSPKISKLKYEVERLGLNSV 246
>gi|424813754|ref|ZP_18238937.1| NOL1/NOP2/sun family protein [Candidatus Nanosalina sp. J07AB43]
gi|339758480|gb|EGQ43736.1| NOL1/NOP2/sun family protein [Candidatus Nanosalina sp. J07AB43]
Length = 222
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 7/160 (4%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GE ++Q + + L+P+ GE++LDMCAAPGGKTT IAS + ++G V+A D++ ++
Sbjct: 6 GEYYVQEESAALPVQVLNPEPGEKVLDMCAAPGGKTTQIASKMNNKGIVIANDKNPKRLK 65
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESN---DEPNMCNSKDNNYITSQTSDSMKLH 357
+ G D + + D P C+ + NN S S S +
Sbjct: 66 SLHANIYRTGSTAANVVNYDGRRIPKELKYDKILVDAP--CSGEGNNSRRSFKSASEQEL 123
Query: 358 KEVPSIAAEGL-NGDKSCKEKGRTC-GECGMAQEEINALV 395
K + ++ + L N +K KE GR C A EE ++V
Sbjct: 124 KTLSNVQQKLLENAEKLLKEDGRIVYSTCTFAPEENESVV 163
>gi|119512103|ref|ZP_01631196.1| Fmu, rRNA SAM-dependent methyltransferase [Nodularia spumigena
CCY9414]
gi|119463261|gb|EAW44205.1| Fmu, rRNA SAM-dependent methyltransferase [Nodularia spumigena
CCY9414]
Length = 449
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I LP F EG +Q+ + + + L PQ GE ++D CAAPGGKTT IA L+ DEGE
Sbjct: 225 IQNLPGFN---EGWWSVQDASAQLVGYLLHPQAGEVVIDACAAPGGKTTHIAELMGDEGE 281
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCI 314
+ A DR+ +++ +++ A + L+ I
Sbjct: 282 IWACDRTASRLRKLKENAQRLHLQSI 307
>gi|428303896|ref|YP_007140721.1| sun protein [Crinalium epipsammum PCC 9333]
gi|428245431|gb|AFZ11211.1| sun protein [Crinalium epipsammum PCC 9333]
Length = 480
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I +LP F EG +Q+ + + ++ LDPQ GE ++D CAAPGGKTT IA L+ D G+
Sbjct: 251 IQELPGFT---EGWWTIQDSSAQLVSYLLDPQPGEVVIDACAAPGGKTTHIAELMGDVGK 307
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCI 314
V DR+ +++ +++ A + LK I
Sbjct: 308 VWGCDRTPSRLKKLKENAQRLNLKSI 333
>gi|334340862|ref|YP_004545842.1| sun protein [Desulfotomaculum ruminis DSM 2154]
gi|334092216|gb|AEG60556.1| sun protein [Desulfotomaculum ruminis DSM 2154]
Length = 453
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 216 RASEGIAVDMH-NRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGG 274
R S+ + +H N S EG +Q+ S++ AHAL+P G ++LD+ +APGG
Sbjct: 209 RESQYVPEGLHINGFLSYRSLDSFKEGLFQVQDESSMLVAHALNPASGAKVLDVASAPGG 268
Query: 275 KTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
KTT +A L+ D GE++AVD +K+ I++ +G+ I DA
Sbjct: 269 KTTHVAQLMGDSGEIIAVDIHSHKLELIKENCVRLGITSIHGLVADA 315
>gi|347756200|ref|YP_004863763.1| ribosomal RNA small subunit methyltransferase RsmB [Candidatus
Chloracidobacterium thermophilum B]
gi|347588717|gb|AEP13246.1| ribosomal RNA small subunit methyltransferase RsmB [Candidatus
Chloracidobacterium thermophilum B]
Length = 519
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G+I++Q+ S A L Q G+R+LDMCAAPGGKT +A+L+++EG + A+D ++V
Sbjct: 291 GKIYVQDAGSQQVARWLGVQPGQRVLDMCAAPGGKTAQLAALMQNEGTITALDVHPHRVA 350
Query: 301 DIQKLAAEMGLKCITTYKLDA 321
+++ A +G++ Y DA
Sbjct: 351 AMEQNLARLGVRIARCYVADA 371
>gi|374607065|ref|ZP_09679871.1| 16S rRNA methyltransferase B [Paenibacillus dendritiformis C454]
gi|374387337|gb|EHQ58853.1| 16S rRNA methyltransferase B [Paenibacillus dendritiformis C454]
Length = 445
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ AL P+ G R+LD CAAPGGK+T IA + D GEV A D +KV
Sbjct: 217 DGRLSVQDESSMLVVEALRPEPGMRVLDCCAAPGGKSTHIAERMGDMGEVTANDIHAHKV 276
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
I++ AA +GL + +DA
Sbjct: 277 ALIEEQAARLGLTSMRVMSVDA 298
>gi|367468304|ref|ZP_09468183.1| Ribosomal RNA small subunit methyltransferase B [Patulibacter sp.
I11]
gi|365816611|gb|EHN11630.1| Ribosomal RNA small subunit methyltransferase B [Patulibacter sp.
I11]
Length = 352
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG + S+ A A+DPQ GER+LD+CAAPGGKTT +A+L+ EG +VA+++ +
Sbjct: 168 EGHYVAMSRGSMRAARAVDPQPGERVLDLCAAPGGKTTHMAALMGGEGTIVAIEKHGGRA 227
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
+++ +G + DAL+
Sbjct: 228 RALRRTCERVGAGNVEVISGDALE 251
>gi|261405800|ref|YP_003242041.1| sun protein [Paenibacillus sp. Y412MC10]
gi|261282263|gb|ACX64234.1| sun protein [Paenibacillus sp. Y412MC10]
Length = 442
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG I +Q+ S++ A A+ P+ G R+LD CAAPGGK+ + L+ DEG +VA D +K
Sbjct: 223 EGMISIQDESSMLVAEAVQPEPGMRVLDCCAAPGGKSAHMGELMNDEGSIVANDIHAHKG 282
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR 327
I A+ +GL I+ DAL R
Sbjct: 283 KLISDQASRLGLDSISIVTGDALDLADR 310
>gi|254168748|ref|ZP_04875590.1| NOL1/NOP2/sun family, putative [Aciduliprofundum boonei T469]
gi|289596783|ref|YP_003483479.1| RNA methylase, NOL1/NOP2/sun family [Aciduliprofundum boonei T469]
gi|197622374|gb|EDY34947.1| NOL1/NOP2/sun family, putative [Aciduliprofundum boonei T469]
gi|289534570|gb|ADD08917.1| RNA methylase, NOL1/NOP2/sun family [Aciduliprofundum boonei T469]
Length = 301
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G ++Q+L S+ AL+PQ+GE+ILDM AAPG KTT +A L+R EG +VA D + N++
Sbjct: 85 GYYYIQDLSSMAPVLALNPQRGEKILDMAAAPGSKTTMLAELMR-EGTIVANDINFNRLK 143
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
+ +G+ + K DA K
Sbjct: 144 SLGGNLERLGITNVLITKKDAKKG 167
>gi|72383594|ref|YP_292949.1| Fmu, rRNA SAM-dependent methyltransferase [Prochlorococcus marinus
str. NATL2A]
gi|72003444|gb|AAZ59246.1| Fmu, rRNA SAM-dependent methyltransferase [Prochlorococcus marinus
str. NATL2A]
Length = 438
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+ +Q+ S + A +L P GE+ILD CAAPGGK+T IA L+ +EG + +VDRS +
Sbjct: 234 EGKWSVQDRSSQLIAPSLGPLPGEKILDACAAPGGKSTHIAELINNEGNLWSVDRSSRRS 293
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
I + +G KC+ D+
Sbjct: 294 KKILANSERLGTKCLQILVADS 315
>gi|404491794|ref|YP_006715900.1| 16S rRNA (5-methyl-C967)-methyltransferase [Pelobacter carbinolicus
DSM 2380]
gi|77543940|gb|ABA87502.1| 16S rRNA (5-methyl-C967)-methyltransferase [Pelobacter carbinolicus
DSM 2380]
Length = 451
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG LQ+ S++ +H L+PQ GERILD CAAPGGKTT +A+L + +VA+D +V
Sbjct: 233 EGIFQLQDQASMLISHLLNPQPGERILDACAAPGGKTTHMAALTDNRARIVALDLHPQRV 292
Query: 300 MDIQKLAAEMGLKCITTYKLD 320
I + A +G + I + D
Sbjct: 293 DLITRGANRLGCQGIEGHAWD 313
>gi|403234848|ref|ZP_10913434.1| 16S rRNA methyltransferase B [Bacillus sp. 10403023]
Length = 447
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ S++ A AL +K + +LD CAAPGGKTT IA +L++ G+V+++D +K+
Sbjct: 230 EGYFTIQDESSMLVARALGVEKDDYVLDSCAAPGGKTTHIAQILQNTGKVISLDLHKHKI 289
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
I + +GL+ + T D+ KA
Sbjct: 290 KLIDEAVTRLGLENVETKAFDSRKA 314
>gi|148262276|ref|YP_001228982.1| sun protein [Geobacter uraniireducens Rf4]
gi|146395776|gb|ABQ24409.1| sun protein [Geobacter uraniireducens Rf4]
Length = 448
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 220 GIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
G+ + + +L SF D G +Q+ S + L P+ GE++LD CAAPGGK T +
Sbjct: 216 GVRIITAGSVARLQSFRD---GLFTVQDESSQLAVMFLSPEPGEKVLDACAAPGGKATHM 272
Query: 280 ASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325
A L+ + GE++A D K+ I + AA +G+ CI T L+ + +
Sbjct: 273 AQLMGNSGEIIACDVIGRKLRLIGENAARLGISCIKTVPLNTARPL 318
>gi|33866211|ref|NP_897770.1| Sun protein (Fmu protein) [Synechococcus sp. WH 8102]
gi|33639186|emb|CAE08194.1| Sun protein (Fmu protein) [Synechococcus sp. WH 8102]
Length = 441
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Query: 189 QTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNL 248
+ +P R+ + +A +S I +G+ V+ H + YD +G +Q+
Sbjct: 190 RVNPLRASRAEVMAALESAGISSHPIDGCPQGLQVEGHKGDLRSWPGYD--DGHWCVQDR 247
Query: 249 PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAE 308
+ L Q G+RILD CAAPGGKTT +A L+ D+ E+ AVDRS ++ + AA
Sbjct: 248 AAQWVTPLLAAQPGDRILDACAAPGGKTTHLAELVNDQAEIWAVDRSAGRLKRVAANAAR 307
Query: 309 MGLKCITTYKLDALKAVRRKNE 330
+G I DA + ++ + E
Sbjct: 308 LGHGSIQALAADAEQLLKDRPE 329
>gi|258512029|ref|YP_003185463.1| Fmu (Sun) domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478755|gb|ACV59074.1| Fmu (Sun) domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 479
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 236 YDVLE--GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEG--EVVA 291
Y VL G +LQ+ ++ A ALDPQ GERILD+CAAPGGKTT A L G ++VA
Sbjct: 79 YTVLHQAGAFYLQDPSAMAVAVALDPQPGERILDLCAAPGGKTTHAALLAARRGGAQIVA 138
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITT 316
D ++V+ + + A +G C T
Sbjct: 139 NDIHRDRVLALAENAERVGAPCAIT 163
>gi|425440910|ref|ZP_18821202.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9717]
gi|389718555|emb|CCH97514.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9717]
Length = 450
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G LQ++ + + + LDPQ GE I+D CAAPGGKTT IA L+ D G ++A D++ +++
Sbjct: 234 GNYTLQDISAQLVTYLLDPQPGETIIDACAAPGGKTTHIAELMGDRGRILACDQTASRLR 293
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK 358
++ + LK I + D S D P D I + S LHK
Sbjct: 294 QLEANIKRLDLKAIEIHLGD----------SRDRPQWHGIADRVLIDAPCSGLGTLHK 341
>gi|218291354|ref|ZP_03495308.1| Fmu (Sun) domain protein [Alicyclobacillus acidocaldarius LAA1]
gi|218238758|gb|EED05973.1| Fmu (Sun) domain protein [Alicyclobacillus acidocaldarius LAA1]
Length = 479
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 236 YDVLE--GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEG--EVVA 291
Y VL G +LQ+ ++ A ALDPQ GERILD+CAAPGGKTT A L G ++VA
Sbjct: 79 YTVLHQAGAFYLQDPSAMAVAVALDPQPGERILDLCAAPGGKTTHAALLAARRGGAQIVA 138
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITT 316
D ++V+ + + A +G C T
Sbjct: 139 NDIHRDRVLALAENAERVGAPCAIT 163
>gi|386714212|ref|YP_006180535.1| Sun protein [Halobacillus halophilus DSM 2266]
gi|384073768|emb|CCG45261.1| Sun protein [Halobacillus halophilus DSM 2266]
Length = 450
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG++ +Q+ S++ A +D +KG ILD C+APGGKTT IA + DEGE+VA D K
Sbjct: 230 EGKVTIQDQSSMLVAEMMDLEKGMTILDACSAPGGKTTHIAEKMEDEGEIVAYDLHVKKA 289
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
+ K A ++ L I + D+
Sbjct: 290 KLVNKKAEQLQLTSIQASQADS 311
>gi|297680257|ref|XP_002817918.1| PREDICTED: putative methyltransferase NSUN5, partial [Pongo abelii]
Length = 377
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 14/139 (10%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEG---IAVDMHNRIFQLPSFYDVLE------GEI 243
YF+R G Y G+ +++ FRA +G + + + P+ D+ E G +
Sbjct: 153 YFKRQGFSYQGRASSLDD----FRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHL 208
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
LQ+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 209 ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 268
Query: 304 KLAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 269 TLLARAGVSCCELAEEDFL 287
>gi|297583987|ref|YP_003699767.1| sun protein [Bacillus selenitireducens MLS10]
gi|297142444|gb|ADH99201.1| sun protein [Bacillus selenitireducens MLS10]
Length = 457
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ S++ LDP+ G R+LD CAAPGGKT+ IA + DEGE+ A+D +K+
Sbjct: 235 EGRCSIQDEGSMMVTGLLDPKPGMRVLDSCAAPGGKTSHIAERMNDEGELYAMDIHKHKI 294
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
I A +GL + K DA
Sbjct: 295 KLIDAQAERLGLSVVHGLKGDA 316
>gi|392960506|ref|ZP_10325974.1| sun protein [Pelosinus fermentans DSM 17108]
gi|421054737|ref|ZP_15517702.1| sun protein [Pelosinus fermentans B4]
gi|421060987|ref|ZP_15523382.1| sun protein [Pelosinus fermentans B3]
gi|421063840|ref|ZP_15525780.1| sun protein [Pelosinus fermentans A12]
gi|421071600|ref|ZP_15532716.1| sun protein [Pelosinus fermentans A11]
gi|392440418|gb|EIW18098.1| sun protein [Pelosinus fermentans B4]
gi|392446865|gb|EIW24136.1| sun protein [Pelosinus fermentans A11]
gi|392452585|gb|EIW29509.1| sun protein [Pelosinus fermentans B3]
gi|392455083|gb|EIW31890.1| sun protein [Pelosinus fermentans DSM 17108]
gi|392462206|gb|EIW38313.1| sun protein [Pelosinus fermentans A12]
Length = 443
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
EGI + + L S D G +Q+ S++ AH L P+ GE I+D C APGGK+T
Sbjct: 213 EGIVCHSYPALSTLKSLRD---GLFQIQDESSMLVAHVLAPKPGEFIIDACGAPGGKSTH 269
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
IA+L+ ++G V++ D +K+ Q+ A +GL I LDA
Sbjct: 270 IATLMGNKGRVLSTDIYDHKLALTQENAQRLGLTIIDVQSLDA 312
>gi|402837092|ref|ZP_10885623.1| ribosomal RNA small subunit methyltransferase B [Mogibacterium sp.
CM50]
gi|402270108|gb|EJU19377.1| ribosomal RNA small subunit methyltransferase B [Mogibacterium sp.
CM50]
Length = 423
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ + G +Q+ S+ + + +P G+++LD+CAAPGGK A+A ++ DEG ++A D
Sbjct: 224 EYMRGMFSIQSTSSLRSIESFNPAPGDKVLDLCAAPGGKAAAMAEMMNDEGVIIATDIHE 283
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDA 321
+++ I A +GL CI DA
Sbjct: 284 HRIRLINDTTARLGLGCIDAEVADA 308
>gi|166367976|ref|YP_001660249.1| rRNA SAM-dependent methyltransferase [Microcystis aeruginosa
NIES-843]
gi|166090349|dbj|BAG05057.1| rRNA SAM-dependent methyltransferase [Microcystis aeruginosa
NIES-843]
Length = 450
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G LQ++ + + + LDPQ GE I+D CAAPGGKTT IA L+ D G ++A D++ +++
Sbjct: 234 GNYTLQDISAQLVTYLLDPQPGETIIDACAAPGGKTTHIAELMGDRGRILACDQTASRLR 293
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK 358
++ + LK I + D S D P D I + S LHK
Sbjct: 294 QLEANIKRLDLKAIEIHLGD----------SRDRPQWHGIADRVLIDAPCSGLGTLHK 341
>gi|422304597|ref|ZP_16391940.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9806]
gi|389790263|emb|CCI13866.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9806]
Length = 446
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G LQ++ + + + LDPQ GE I+D CAAPGGKTT IA L+ D G ++A D++ +++
Sbjct: 234 GNYTLQDISAQLVTYLLDPQPGETIIDACAAPGGKTTHIAELMGDRGRILACDQTASRLR 293
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK 358
++ + LK I + D S D P D I + S LHK
Sbjct: 294 QLEANIKRLDLKAIEIHLGD----------SRDRPQWHGIADRVLIDAPCSGLGTLHK 341
>gi|409993041|ref|ZP_11276199.1| 16S rRNA methyltransferase B [Arthrospira platensis str. Paraca]
gi|291566504|dbj|BAI88776.1| ribosomal RNA small subunit methyltransferase B [Arthrospira
platensis NIES-39]
gi|409936102|gb|EKN77608.1| 16S rRNA methyltransferase B [Arthrospira platensis str. Paraca]
Length = 447
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 8/100 (8%)
Query: 215 FRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGG 274
+R S G+ I LP YD +G +Q+ + + + +DPQ GE I+D CAAPGG
Sbjct: 221 WRLSSGVGA-----IRNLPG-YD--QGWWTVQDASAQLVGYIVDPQPGEIIIDACAAPGG 272
Query: 275 KTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
KTT IA L+ D G+V+A+DRS ++ +++ + L+ I
Sbjct: 273 KTTHIAELMGDNGKVIAIDRSPGRLKPLKQNINRLKLRSI 312
>gi|45358689|ref|NP_988246.1| proliferating-cell nucleolar antigen [Methanococcus maripaludis S2]
gi|45047555|emb|CAF30682.1| putative proliferating-cell nucleolar antigen [Methanococcus
maripaludis S2]
Length = 292
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 230 FQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEV 289
F + S + L G FLQ++ SI+ + L+P K + +LDMCAAPGGKTT +A L+ +EG +
Sbjct: 73 FSMGSTPEYLLGYYFLQSISSIIPSITLNPSKDDEVLDMCAAPGGKTTHLAQLMENEGSI 132
Query: 290 VAVDRSHNKVMDIQKLAAEMGLK---CITTYKLDALKAVRRKNESNDEPNMCNS-KDNNY 345
+AV+ + N++ ++ MG K I T ++ K +R D P N KD+N
Sbjct: 133 LAVEINKNRLKSLRSNINRMGFKNTLMINTNAVNIDKKLRFDKILLDAPCTGNEVKDSNR 192
Query: 346 ITSQ 349
+ ++
Sbjct: 193 VKTK 196
>gi|329926565|ref|ZP_08280978.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus sp.
HGF5]
gi|328939106|gb|EGG35469.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus sp.
HGF5]
Length = 442
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G I +Q+ S++ A A+ P+ G R+LD CAAPGGK+ + L++DEG +VA D +K
Sbjct: 223 DGMISIQDESSMLVAEAVQPEPGMRVLDCCAAPGGKSAHMGELMKDEGSIVANDIHAHKG 282
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR 327
I A+ +GL I+ DAL R
Sbjct: 283 KLISDQASRLGLDSISIVTGDALDLADR 310
>gi|189241014|ref|XP_968918.2| PREDICTED: similar to williams-beuren syndrome critical region
protein [Tribolium castaneum]
Length = 840
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 166 VEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRA-----SEG 220
VE+P L IT ++G F G + + T + G A S
Sbjct: 214 VEKPRYVRVNTLKITVNEAIEG-------FREEGWVLKRYTDSENYLGFLEAVSNLGSNE 266
Query: 221 IAVDMH----------NRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCA 270
VD+H +Q ++ + G I LQ+ S + H LDPQ G ILDMCA
Sbjct: 267 FMVDLHIPYLLIFPPKTEFYQHAAYKN---GSIILQDKASCLPVHILDPQPGTSILDMCA 323
Query: 271 APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
APG KTT A+L+ + G++ AV+ + ++K+ G C+ D L+
Sbjct: 324 APGMKTTQCAALIDNIGKIYAVEIGTKRFHTLEKIVESSGASCVEPINSDVLQ 376
>gi|336236100|ref|YP_004588716.1| sun protein [Geobacillus thermoglucosidasius C56-YS93]
gi|335362955|gb|AEH48635.1| sun protein [Geobacillus thermoglucosidasius C56-YS93]
Length = 447
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G I +Q+ S++ A AL P++ ER+LD CAAPGGK+T IA L+ + G+V+ D +KV
Sbjct: 231 GWITIQDESSMLVARALGPKEHERVLDSCAAPGGKSTHIAELMNNTGQVICADIHEHKVN 290
Query: 301 DIQKLAAEMGLKCITTYKLDA 321
I++ A + L I+ LD+
Sbjct: 291 LIEENAKRLQLTNISARTLDS 311
>gi|340624444|ref|YP_004742897.1| putative proliferating-cell nucleolar antigen [Methanococcus
maripaludis X1]
gi|339904712|gb|AEK20154.1| putative proliferating-cell nucleolar antigen [Methanococcus
maripaludis X1]
Length = 265
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 230 FQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEV 289
F + S + L G FLQ++ SI+ + L+P K + +LDMCAAPGGKTT +A L+ +EG +
Sbjct: 46 FSMGSTPEYLLGYYFLQSISSIIPSITLNPSKDDEVLDMCAAPGGKTTHLAQLMENEGSI 105
Query: 290 VAVDRSHNKVMDIQKLAAEMGLK---CITTYKLDALKAVRRKNESNDEPNMCNS-KDNNY 345
+AV+ + N++ ++ MG K I T ++ K +R D P N KD+N
Sbjct: 106 LAVEINKNRLKSLRSNINRMGFKNTLMINTNAVNIDKKLRFNKILLDAPCTGNEIKDSNR 165
Query: 346 ITSQ 349
+ ++
Sbjct: 166 VKTK 169
>gi|402839079|ref|ZP_10887572.1| ribosomal RNA small subunit methyltransferase B [Eubacteriaceae
bacterium OBRC8]
gi|402270618|gb|EJU19876.1| ribosomal RNA small subunit methyltransferase B [Eubacteriaceae
bacterium OBRC8]
Length = 436
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 61/105 (58%), Gaps = 6/105 (5%)
Query: 223 VDMHNRIFQLPSFYDVLEGEIF------LQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
+D N I L +F D+ + +++ +Q+ S+ AL P+ E +LD+CAAPGGK+
Sbjct: 213 IDEENMIVSLKNFKDISKNDMYRNGFFSVQDYASMKAVLALSPEPFENVLDICAAPGGKS 272
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+A L+ ++G + ++D S K+ +++ A +G+ I TY DA
Sbjct: 273 VFMAELMGNKGSITSLDISSKKLKLLEEQAKRLGINIIKTYVNDA 317
>gi|383625298|ref|ZP_09949704.1| RNA methylase, NOL1/NOP2/sun family protein [Halobiforma lacisalsi
AJ5]
gi|448700278|ref|ZP_21699386.1| RNA methylase, NOL1/NOP2/sun family protein [Halobiforma lacisalsi
AJ5]
gi|445779818|gb|EMA30733.1| RNA methylase, NOL1/NOP2/sun family protein [Halobiforma lacisalsi
AJ5]
Length = 302
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 17/129 (13%)
Query: 202 IGQGTAMMSRAGIFRASEGIAVDMHNRIFQL---------PSFYDVLEGEIFLQNLPSIV 252
+ + TA + G+ E D + R+ +L SF+ G+ + +P +V
Sbjct: 38 VERATATLEEEGV----EFDQADWNPRVLRLETDSPGATWASFHGFTHGQEEVSAVPPVV 93
Query: 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312
LDPQ GER+ D CAAPGGK T IA+L+ DEG VVA D + ++ ++ A +G
Sbjct: 94 ----LDPQPGERVWDACAAPGGKATQIAALMDDEGTVVANDSNLGRISALRFNAERLGAT 149
Query: 313 CITTYKLDA 321
+ DA
Sbjct: 150 NLAVTNADA 158
>gi|363891855|ref|ZP_09319030.1| ribosomal RNA small subunit methyltransferase B [Eubacteriaceae
bacterium CM2]
gi|361964850|gb|EHL17856.1| ribosomal RNA small subunit methyltransferase B [Eubacteriaceae
bacterium CM2]
Length = 436
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 61/105 (58%), Gaps = 6/105 (5%)
Query: 223 VDMHNRIFQLPSFYDVLEGEIF------LQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
+D N I L +F D+ + +++ +Q+ S+ AL P+ E +LD+CAAPGGK+
Sbjct: 213 IDEENMIVSLKNFKDISKNDMYRNGFFSVQDYASMKAVLALSPEPFENVLDICAAPGGKS 272
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+A L+ ++G + ++D S K+ +++ A +G+ I TY DA
Sbjct: 273 VFMAELMGNKGSITSLDISSKKLKLLEEQAKRLGINIIKTYVNDA 317
>gi|326790876|ref|YP_004308697.1| sun protein [Clostridium lentocellum DSM 5427]
gi|326541640|gb|ADZ83499.1| sun protein [Clostridium lentocellum DSM 5427]
Length = 445
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Query: 233 PSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAV 292
PSF +GE +Q+ +++ AH + PQKG+ ILDMC+APGGK+ +A L+ + G +V+
Sbjct: 227 PSFK---KGEWTVQDESAMLVAHVMAPQKGDCILDMCSAPGGKSIHMAELMENAGRIVSC 283
Query: 293 DRSHNKVMDIQKLAAEMGLKCI 314
D +K+ I+K A MG+ I
Sbjct: 284 DIHPHKLELIKKNAERMGITII 305
>gi|375309204|ref|ZP_09774485.1| ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Paenibacillus sp.
Aloe-11]
gi|375078513|gb|EHS56740.1| ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Paenibacillus sp.
Aloe-11]
Length = 471
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L S+Y +G + +Q+ S++ A A+ P+ G +LD CAAPGGKT +A L++D+G ++A
Sbjct: 248 LTSWY--TDGLLSVQDESSMLVAEAVAPEPGMLVLDCCAAPGGKTAHMAELMKDQGRIIA 305
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
D +K IQ+ A +GL + T DAL+
Sbjct: 306 NDLHAHKHHLIQEQADRLGLDAVETVTGDALE 337
>gi|379005444|ref|YP_005261116.1| tRNA and rRNA cytosine-C5-methylase [Pyrobaculum oguniense TE7]
gi|375160897|gb|AFA40509.1| tRNA and rRNA cytosine-C5-methylase [Pyrobaculum oguniense TE7]
Length = 377
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 117/285 (41%), Gaps = 68/285 (23%)
Query: 33 SRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTIS 92
S + LT P Y IRVNT K + +++I++L +++G IS
Sbjct: 27 SMLRSVLTPPQRY-YIRVNTTKISPNELIKRL----------------NLRG------IS 63
Query: 93 ESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSS 152
+ E V+ GP I K V+V +K AE+++ GA +Y P ++ +
Sbjct: 64 AYKDEVFEDAVWFPVEGPFKIPSA------KKIVVVDKKAAESIMLGADLYGPAIIK-TD 116
Query: 153 HVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRA 212
V+ G+ V + +G+ + G A+M+
Sbjct: 117 PVKSGEEVNI--------------------------------VSDNGVLVAYGKAVMNSD 144
Query: 213 GIFRASEGIAVDMHNRIFQLPSFYDV---LEGEIFLQNLPSIVTAHALDPQKGERILDMC 269
R+ G+ V + +++ P D+ EG + Q+LP+I H + +D+
Sbjct: 145 EALRSRRGLFVKVEKSLYKAPKLRDLPEYAEGLFYSQSLPAIAVGHIARKFAQQSAVDLN 204
Query: 270 AAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
AAPGGK T +A V+AVDRS K+ ++ +GL +
Sbjct: 205 AAPGGKATHLAQY---GIHVIAVDRSSPKISKLKYEVERLGLNSV 246
>gi|427725626|ref|YP_007072903.1| sun protein [Leptolyngbya sp. PCC 7376]
gi|427357346|gb|AFY40069.1| sun protein [Leptolyngbya sp. PCC 7376]
Length = 450
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ + + +H LDPQ E I+D CAAPGGKTT IA L+ DEG + A D+ ++
Sbjct: 234 EGWWTIQDASAQLVSHLLDPQPREVIIDACAAPGGKTTHIAELMGDEGTIWASDKYKARI 293
Query: 300 MDIQKLAAEMGLKCITT 316
I++ A + L I T
Sbjct: 294 NKIEQNARRLNLSMIRT 310
>gi|312111726|ref|YP_003990042.1| sun protein [Geobacillus sp. Y4.1MC1]
gi|423720641|ref|ZP_17694823.1| ribosomal RNA small subunit methyltransferase B [Geobacillus
thermoglucosidans TNO-09.020]
gi|311216827|gb|ADP75431.1| sun protein [Geobacillus sp. Y4.1MC1]
gi|383365994|gb|EID43285.1| ribosomal RNA small subunit methyltransferase B [Geobacillus
thermoglucosidans TNO-09.020]
Length = 447
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G I +Q+ S++ A AL P++ ER+LD CAAPGGK+T IA L+ + G+V+ D +KV
Sbjct: 231 GWITIQDESSMLVARALGPKEHERVLDSCAAPGGKSTHIAELMNNTGQVICADIHEHKVN 290
Query: 301 DIQKLAAEMGLKCITTYKLDA 321
I++ A + L I+ LD+
Sbjct: 291 LIEENAKRLQLTNISARTLDS 311
>gi|319649620|ref|ZP_08003776.1| sun protein [Bacillus sp. 2_A_57_CT2]
gi|317398782|gb|EFV79464.1| sun protein [Bacillus sp. 2_A_57_CT2]
Length = 451
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G I +Q+ S++ A+AL E+ILD CAAPGGKTT IA +++ G+V+++D +KV
Sbjct: 233 DGLITIQDESSMLAAYALGGNPNEKILDACAAPGGKTTHIAEKMQNTGQVISLDLHEHKV 292
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I A +GL I T LD+ K
Sbjct: 293 KLINDNADRLGLSNIKTNALDSRK 316
>gi|312091304|ref|XP_003146932.1| hypothetical protein LOAG_11363 [Loa loa]
gi|307757905|gb|EFO17139.1| hypothetical protein LOAG_11363 [Loa loa]
Length = 434
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 156 KGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIF 215
KG V +S VE P L + LQ Q + + S L + A
Sbjct: 120 KGHVAQLSAVVENPRYARVNTLKWSFDEALQALQDEGWSI--SSLEPQEDDDWYKIAVSS 177
Query: 216 RASEGIAVDMH-NRIFQLPSFYD------VLEGEIFLQNLPSIVTAHALDPQKGERILDM 268
+ +D H N + P+ D V++G + LQ+ S +++ L+P+ G I D+
Sbjct: 178 MLKNQVYIDCHVNELLLFPANADLHQHWMVIDGYLLLQDKASCLSSLVLNPKAGTYIFDI 237
Query: 269 CAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
CAAPG KTT +A+L+++EG++ A+DR+ ++V + + + G ++T
Sbjct: 238 CAAPGMKTTHLAALVQNEGKIWAIDRASDRVKTLCTMVDKAGAINVST 285
>gi|148240114|ref|YP_001225501.1| ribosomal RNA small subunit methyltransferase B [Synechococcus sp.
WH 7803]
gi|147848653|emb|CAK24204.1| Ribosomal RNA small subunit methyltransferase B [Synechococcus sp.
WH 7803]
Length = 447
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 209 MSRAGIFRASEGIAVDMHNR--IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERIL 266
M A I +G+ V +H+ + Q P + EG +Q+ + A L + G+R+L
Sbjct: 214 MPTAAIPGCPDGLQV-LHSAGDLRQWPGYE---EGHWCVQDRAAQWVAPLLAVEPGQRVL 269
Query: 267 DMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCIT 315
D CAAPGGK T +A L+ D+GEV AVDRS ++ + AA +G CI
Sbjct: 270 DACAAPGGKATHLAELMGDQGEVWAVDRSGGRLQRVAANAARLGCGCIN 318
>gi|448311762|ref|ZP_21501516.1| RNA methylase, NOL1/NOP2/sun family protein [Natronolimnobius
innermongolicus JCM 12255]
gi|445603793|gb|ELY57750.1| RNA methylase, NOL1/NOP2/sun family protein [Natronolimnobius
innermongolicus JCM 12255]
Length = 302
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
SF+ G+ + +P IV LDPQ GER+ D CAAPGGK T IA+L+ DEG VVA D
Sbjct: 75 SFHGFTHGQEEVSAVPPIV----LDPQSGERVWDCCAAPGGKATQIAALMDDEGTVVAND 130
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ ++ ++ A +G + DA
Sbjct: 131 NNLGRISALRFNAERLGATSLAVTNDDA 158
>gi|210622413|ref|ZP_03293145.1| hypothetical protein CLOHIR_01093 [Clostridium hiranonis DSM 13275]
gi|210154229|gb|EEA85235.1| hypothetical protein CLOHIR_01093 [Clostridium hiranonis DSM 13275]
Length = 441
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 11/137 (8%)
Query: 196 ERSGLYIGQGTAMMSRAGIFRA--SEGIAVD---MHNRIFQLPSFYDV------LEGEIF 244
ER LY+ T + R + + EGI + + +F + EG
Sbjct: 174 ERPDLYVRTNTLKIDRNSLLKEFEKEGIKASKAMLPEEAIMVENFKGIESSRLYKEGLFT 233
Query: 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304
+Q++ S++ A + P++G+ +LDMC+APGGK+T +A L+++ G++V+ D +K+ I+
Sbjct: 234 VQDISSMLVAKVVAPKEGDMVLDMCSAPGGKSTHMAELMKNTGKIVSRDVFEHKIKVIKA 293
Query: 305 LAAEMGLKCITTYKLDA 321
A +G+ I + DA
Sbjct: 294 AAKRLGITNIEAEEFDA 310
>gi|443700527|gb|ELT99424.1| hypothetical protein CAPTEDRAFT_211590, partial [Capitella teleta]
Length = 341
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G I LQ+ S + A AL P G ++D CAAPG KTT +A++++++G V+A DR +
Sbjct: 100 GLIILQDKASCIPAFALQPPPGSHVVDCCAAPGNKTTHLAAIMQNQGRVIAFDRDMKRFS 159
Query: 301 DIQKLAAEMGLKCITTYKLDALK 323
+ L G CI + D LK
Sbjct: 160 TMNTLIIRAGASCIRSELKDFLK 182
>gi|18977038|ref|NP_578395.1| nol1-nop2-sun family nucleolar protein IV [Pyrococcus furiosus DSM
3638]
gi|397651170|ref|YP_006491751.1| nol1-nop2-sun family nucleolar protein IV [Pyrococcus furiosus
COM1]
gi|18892673|gb|AAL80790.1| putative nucleolar protein IV (nol1-nop2-sun family) [Pyrococcus
furiosus DSM 3638]
gi|393188761|gb|AFN03459.1| nol1-nop2-sun family nucleolar protein IV [Pyrococcus furiosus
COM1]
Length = 452
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 55/95 (57%)
Query: 230 FQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEV 289
+ S Y +G+I +Q S V + LDP+ GE ++D+ AAPGGKTT +A L+++ G++
Sbjct: 229 YDFDSSYLFRKGKIIVQEEASAVASVILDPKPGEVVVDLAAAPGGKTTHMAELMKNRGKI 288
Query: 290 VAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324
A D ++ ++ + MG+K + DA KA
Sbjct: 289 FAFDIDKARMKRLKDFVSRMGIKIVKPIVKDARKA 323
>gi|408492272|ref|YP_006868641.1| tRNA/small subunit rRNA cytosine -C5 methyltransferase RsmB
[Psychroflexus torquis ATCC 700755]
gi|408469547|gb|AFU69891.1| tRNA/small subunit rRNA cytosine -C5 methyltransferase RsmB
[Psychroflexus torquis ATCC 700755]
Length = 404
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 70/114 (61%), Gaps = 5/114 (4%)
Query: 222 AVDMHNR--IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
A++++ R +F+ +F +G +Q+ S AHAL + G R++D CA GGKT I
Sbjct: 185 ALELYERADVFKTEAFK---KGFFEVQDASSQKVAHALKLEPGLRVIDACAGAGGKTLHI 241
Query: 280 ASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
A+L+ ++G+V+A+D NK+ ++++ A G + T ++D+ K +++ ++S D
Sbjct: 242 AALMENKGQVIAMDIYGNKLKELKRRAKRAGAHNLETREIDSTKVIKKLHDSAD 295
>gi|317059336|ref|ZP_07923821.1| 16S rRNA m(5)C 967 methyltransferase [Fusobacterium sp. 3_1_5R]
gi|313685012|gb|EFS21847.1| 16S rRNA m(5)C 967 methyltransferase [Fusobacterium sp. 3_1_5R]
Length = 440
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 54/82 (65%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+I +Q+ S + A L + GE +LD C+APGGKT+ +A +++EG+++++D +K+
Sbjct: 219 EGKIIVQDAASYLAAKNLGAKPGEIVLDTCSAPGGKTSVLAEAMKNEGQILSLDIHTHKI 278
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
IQ+ ++G+ + KLDA
Sbjct: 279 KLIQENCKKLGITIVQAVKLDA 300
>gi|124023762|ref|YP_001018069.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. MIT 9303]
gi|123964048|gb|ABM78804.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. MIT 9303]
Length = 450
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
+ Q P + +G +Q+ + + A L PQ G+RILD CAAPGGK T + L+ GE
Sbjct: 240 LSQWPGYQ---QGHWCVQDRSAQLVAPLLGPQPGDRILDACAAPGGKATHLVELMGGSGE 296
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
V AVDRS ++ + + AA +G C+ DA
Sbjct: 297 VWAVDRSAGRLKRLAENAARLGGDCLHALVADA 329
>gi|315917987|ref|ZP_07914227.1| 16S rRNA m(5)C 967 methyltransferase [Fusobacterium gonidiaformans
ATCC 25563]
gi|313691862|gb|EFS28697.1| 16S rRNA m(5)C 967 methyltransferase [Fusobacterium gonidiaformans
ATCC 25563]
Length = 440
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 54/82 (65%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+I +Q+ S + A L + GE +LD C+APGGKT+ +A +++EG+++++D +K+
Sbjct: 219 EGKIIVQDAASYLAAKNLGAKPGEIVLDTCSAPGGKTSVLAEAMKNEGQILSLDIHTHKI 278
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
IQ+ ++G+ + KLDA
Sbjct: 279 KLIQENCKKLGITIVQAVKLDA 300
>gi|225181330|ref|ZP_03734774.1| sun protein [Dethiobacter alkaliphilus AHT 1]
gi|225167911|gb|EEG76718.1| sun protein [Dethiobacter alkaliphilus AHT 1]
Length = 451
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
EG + R+ +L + EG +Q +++T+ LDPQ G+ +LD C+APGGKTT
Sbjct: 219 EGALLTRSGRLTELAPYR---EGRFQVQGESAMLTSRVLDPQAGDAVLDGCSAPGGKTTH 275
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
+A L+ + G+++A+D +++ ++ MG+ + T LDA + + +S D
Sbjct: 276 LAQLMNNSGDILALDIHPHRLELVKANCRRMGVDIVRTQCLDAREIAKENPDSFD 330
>gi|288553113|ref|YP_003425048.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus pseudofirmus
OF4]
gi|288544273|gb|ADC48156.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus pseudofirmus
OF4]
Length = 448
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 218 SEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
SE + ++F+ +F +G + Q+ S++ AL GER+ D+CAAPGGKTT
Sbjct: 211 SEDALIIKSGQVFESKAFK---QGYVTAQDESSMLVGRALGANSGERVADVCAAPGGKTT 267
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
IA + +EG V+A D +KV I+ AA + L I T DA K
Sbjct: 268 HIAEQMNNEGSVLAFDLHDHKVKLIRGQAARLDLSIIDTQAADARK 313
>gi|220931836|ref|YP_002508744.1| sun protein [Halothermothrix orenii H 168]
gi|219993146|gb|ACL69749.1| sun protein [Halothermothrix orenii H 168]
Length = 440
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 222 AVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIAS 281
V+ N I LP F D G +Q + + L P G R+LDM A PGGKTT +A
Sbjct: 214 VVNNFNTIKDLPLFKD---GGFIVQGPAATLAGFVLGPDPGNRVLDMSAGPGGKTTHLAE 270
Query: 282 LLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
L+ + GE++A+D +K+ I++ +G+ + T K+D
Sbjct: 271 LMNNRGEIIALDIYEHKLKLIEENCNRLGVNIVKTIKVDG 310
>gi|20093483|ref|NP_613330.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
gi|19886312|gb|AAM01260.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
Length = 444
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRS 295
EG +F Q+ S AH LDPQ GE ++D+CAAPGGKT L+ EGE++AVD+S
Sbjct: 232 EGLVFTQDKASAAVAHVLDPQPGEFVVDLCAAPGGKTLHALCLMEGEGEILAVDKS 287
>gi|399574398|ref|ZP_10768157.1| nol1/nop2/sun family RNA methylase [Halogranum salarium B-1]
gi|399240230|gb|EJN61155.1| nol1/nop2/sun family RNA methylase [Halogranum salarium B-1]
Length = 311
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 214 IFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPG 273
I R +EG A P F+ L G+ + LP+I ALDPQ GE + D CAAPG
Sbjct: 61 ILRLTEGKAGTT------WPYFHGWLHGQEEVSALPAI----ALDPQPGETVWDTCAAPG 110
Query: 274 GKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
K+T +++L+ DEG VVA D S ++ ++ A +G+ + DA
Sbjct: 111 SKSTQLSALMDDEGFVVANDNSLGRLSALRHNAERLGVTNVAVTNKDA 158
>gi|257066168|ref|YP_003152424.1| Fmu (Sun) domain-containing protein [Anaerococcus prevotii DSM
20548]
gi|256798048|gb|ACV28703.1| Fmu (Sun) domain protein [Anaerococcus prevotii DSM 20548]
Length = 430
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q S+ T LDPQK +ILD+CAAPG KT+ +A R+ G+++A D S NK+
Sbjct: 224 EGLFTIQQEASMKTVEVLDPQKDSKILDLCAAPGTKTSYLAEYTRNSGKIIANDISKNKL 283
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
I++ +GL I DA
Sbjct: 284 NLIRENIERLGLSNIELDSFDA 305
>gi|322371799|ref|ZP_08046342.1| tRNA and rRNA cytosine-C5-methylase [Haladaptatus paucihalophilus
DX253]
gi|320548684|gb|EFW90355.1| tRNA and rRNA cytosine-C5-methylase [Haladaptatus paucihalophilus
DX253]
Length = 301
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
PSF+ G+ + ++P+ V LDP+ GER+LD CAAPG KTT +A+L+ D G VVA
Sbjct: 72 WPSFHGWTHGQEEVSSIPAFV----LDPEPGERVLDSCAAPGSKTTQLAALMDDTGLVVA 127
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
D + ++ ++ +G+ C DA
Sbjct: 128 NDSNLGRLSALRFNTERLGVTCAAVTNQDA 157
>gi|270013829|gb|EFA10277.1| hypothetical protein TcasGA2_TC012481 [Tribolium castaneum]
Length = 767
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 166 VEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRA-----SEG 220
VE+P L IT ++G F G + + T + G A S
Sbjct: 127 VEKPRYVRVNTLKITVNEAIEG-------FREEGWVLKRYTDSENYLGFLEAVSNLGSNE 179
Query: 221 IAVDMH----------NRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCA 270
VD+H +Q ++ + G I LQ+ S + H LDPQ G ILDMCA
Sbjct: 180 FMVDLHIPYLLIFPPKTEFYQHAAYKN---GSIILQDKASCLPVHILDPQPGTSILDMCA 236
Query: 271 APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
APG KTT A+L+ + G++ AV+ + ++K+ G C+ D L+
Sbjct: 237 APGMKTTQCAALIDNIGKIYAVEIGTKRFHTLEKIVESSGASCVEPINSDVLQ 289
>gi|150399201|ref|YP_001322968.1| NOL1/NOP2/sun family RNA methylase [Methanococcus vannielii SB]
gi|150011904|gb|ABR54356.1| putative RNA methylase, NOL1/NOP2/sun family [Methanococcus
vannielii SB]
Length = 265
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 60/93 (64%)
Query: 230 FQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEV 289
F + + + L G FLQ++ SI+ + L+P K +++LDMC+APGGKTT ++ L+ +EG +
Sbjct: 46 FSMGATPEYLSGLYFLQSISSIIPSIVLNPTKDDKVLDMCSAPGGKTTHLSQLMENEGCI 105
Query: 290 VAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322
VAV+ + N++ ++ MG+K I +A+
Sbjct: 106 VAVEINKNRLKSLRSNINRMGIKNIIMLNTNAI 138
>gi|374997153|ref|YP_004972652.1| ribosomal RNA small subunit methyltransferase RsmB
[Desulfosporosinus orientis DSM 765]
gi|357215519|gb|AET70137.1| ribosomal RNA small subunit methyltransferase RsmB
[Desulfosporosinus orientis DSM 765]
Length = 452
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 102/229 (44%), Gaps = 32/229 (13%)
Query: 196 ERSGLYIGQGTAMMSRAGIFR--ASEGIAVDMHNRI--------F----QLPSFYDVLEG 241
E + ++I T +SR + EGI V++ R+ F QL SF +G
Sbjct: 176 EPAPIWIRTNTLKISRPDLAERLKEEGITVELGARVPESLRIQDFGALDQLDSFR---KG 232
Query: 242 EIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMD 301
+Q+ S + AH PQ G+ +LD C+APGGK++ +A ++ + GE++A D +K+
Sbjct: 233 LFTVQDESSQLVAHVAAPQPGQSVLDACSAPGGKSSHLAQIMENRGEILAFDIHEHKLEL 292
Query: 302 IQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKD---NNYITSQTSDSMKLHK 358
I +LA +G+ I DA + ES D C D + + M+ K
Sbjct: 293 INQLAHRLGITIIDAQLGDARNLPGIRLESQD----CVLADVPCSGLGVLRRKADMRWQK 348
Query: 359 ------EVPSIAAEGLNGDKSCKEKGRTC--GECGMAQEEINALVVGLR 399
E+PS+ L SC +KG T C + EE LV R
Sbjct: 349 DEKDLQELPSLQWAILERAASCVKKGGTLIYTTCTIEPEENFELVKKFR 397
>gi|340355046|ref|ZP_08677739.1| RNA methyltransferase Sun [Sporosarcina newyorkensis 2681]
gi|339622727|gb|EGQ27241.1| RNA methyltransferase Sun [Sporosarcina newyorkensis 2681]
Length = 446
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ A AL + G ++LDMCAAPGGKTT IA ++DEGEV A D +K+
Sbjct: 235 QGLLTVQDESSMLPALALQVEPGMKVLDMCAAPGGKTTHIAERMKDEGEVQAHDLHPHKL 294
Query: 300 MDIQKLAAEMGLKCITT 316
I++ A +GL I T
Sbjct: 295 RLIEQNAERLGLTSIHT 311
>gi|363895560|ref|ZP_09322555.1| hypothetical protein HMPREF9629_00837 [Eubacteriaceae bacterium
ACC19a]
gi|361957312|gb|EHL10622.1| hypothetical protein HMPREF9629_00837 [Eubacteriaceae bacterium
ACC19a]
Length = 435
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
Query: 223 VDMHNRIFQLPSFYDVLEGEIF------LQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
+D N I L +F D+ + +++ +Q+ S+ T L P+ E +LD+CAAPGGK+
Sbjct: 213 IDEENMIVSLKNFKDISKNDMYKKGLFSVQDYASMKTVLVLSPKSYEDVLDICAAPGGKS 272
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+A L+ ++G + ++D S K+ +++ +G+ I TY DA
Sbjct: 273 VFMAELMENKGSITSLDISSKKLKLLEEQTKRLGIDIIKTYVNDA 317
>gi|407036203|gb|EKE38056.1| Proliferating-cell nucleolar antigen p120, putative [Entamoeba
nuttalli P19]
Length = 497
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
L G+ LQ+ S V+ AL PQ E+ILDMCAAPGGKTT IA+L++D G +VA D S ++
Sbjct: 267 LAGQYILQSSSSWVSVIALAPQPNEKILDMCAAPGGKTTHIAALMKDTGVLVANDISKDR 326
Query: 299 VMDIQKLAAEMGL--KCITTY 317
+ + +G+ IT Y
Sbjct: 327 LKAVIGNVHRLGITNTIITNY 347
>gi|363891053|ref|ZP_09318336.1| hypothetical protein HMPREF9628_00820 [Eubacteriaceae bacterium
CM5]
gi|361962020|gb|EHL15169.1| hypothetical protein HMPREF9628_00820 [Eubacteriaceae bacterium
CM5]
Length = 436
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
Query: 223 VDMHNRIFQLPSFYDVLEGEIF------LQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
+D N I L +F D+ + +++ +Q+ S+ T L P+ E +LD+CAAPGGK+
Sbjct: 213 IDEENMIVSLKNFKDISKNDMYKKGLFSVQDYASMKTVLVLSPKSYEDVLDICAAPGGKS 272
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+A L+ ++G + ++D S K+ +++ +G+ I TY DA
Sbjct: 273 VFMAELMENKGSITSLDISSKKLKLLEEQTKRLGIDIIKTYVNDA 317
>gi|310642738|ref|YP_003947496.1| ribosomal RNA small subunit methyltransferase b [Paenibacillus
polymyxa SC2]
gi|386041819|ref|YP_005960773.1| sun protein [Paenibacillus polymyxa M1]
gi|309247688|gb|ADO57255.1| Ribosomal RNA small subunit methyltransferase B [Paenibacillus
polymyxa SC2]
gi|343097857|emb|CCC86066.1| sun protein [Paenibacillus polymyxa M1]
Length = 471
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L S+Y +G + +Q+ S++ A A+ P+ G +LD CAAPGGKT +A L++D G +VA
Sbjct: 248 LTSWY--TDGLLSVQDESSMLVAEAVAPEPGMTVLDCCAAPGGKTAHMAELMKDRGRIVA 305
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR 327
D +K I++ A+ +GL + T DAL R
Sbjct: 306 NDLHAHKHQLIREQASRLGLDAVETVTGDALDLKER 341
>gi|159902963|ref|YP_001550307.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. MIT 9211]
gi|159888139|gb|ABX08353.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. MIT 9211]
Length = 432
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GE +Q+ S A L+ + G+RILD C+APGGK T +A L+ D GE+ AVDRS ++
Sbjct: 231 GEWSVQDRSSQWIAPLLEAEPGDRILDACSAPGGKATHLAELIDDNGEIWAVDRSPKRLQ 290
Query: 301 DIQKLAAEMGLKCITTYKLDA 321
+ + A +GL + DA
Sbjct: 291 KVSENATRLGLNSLKCLAADA 311
>gi|332796458|ref|YP_004457958.1| RNA methylase [Acidianus hospitalis W1]
gi|332694193|gb|AEE93660.1| RNA methylase, NOL1/NOP2/sun family [Acidianus hospitalis W1]
Length = 335
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 54/85 (63%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L+G ++Q L S+V A+ L+P + +LDM AAPGGKTT ++ ++ +EG +VAV++S
Sbjct: 112 EYLQGYYYIQGLASMVPAYVLNPSSSDTVLDMAAAPGGKTTQLSQIMNNEGLIVAVEKSR 171
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDA 321
+V + + +G++ + + D
Sbjct: 172 LRVTSLLSNISRLGVRNVLLLRSDV 196
>gi|448576136|ref|ZP_21642179.1| tRNA and rRNA cytosine-C5-methylase [Haloferax larsenii JCM 13917]
gi|445729816|gb|ELZ81410.1| tRNA and rRNA cytosine-C5-methylase [Haloferax larsenii JCM 13917]
Length = 313
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 16/125 (12%)
Query: 209 MSRAGIFRASEGIA---VDMHNRIFQL---------PSFYDVLEGEIFLQNLPSIVTAHA 256
++RA EG+A D H I +L P F+ L G+ + LP+I A
Sbjct: 38 VARAREALDDEGVAYEPTDWHPGILKLEDSSPGTNWPYFHGWLHGQEEVSALPAI----A 93
Query: 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
LDPQ GE++ D CAAPG KTT IA+++ D+G +V D + ++ ++ A +G+ +
Sbjct: 94 LDPQPGEKVWDTCAAPGSKTTQIAAMMDDQGVLVGNDNNLGRLSALRHNAERLGVTNLAV 153
Query: 317 YKLDA 321
DA
Sbjct: 154 TNQDA 158
>gi|332981565|ref|YP_004463006.1| sun protein [Mahella australiensis 50-1 BON]
gi|332699243|gb|AEE96184.1| sun protein [Mahella australiensis 50-1 BON]
Length = 447
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 207 AMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERIL 266
++M G++ E + ++ + + LP + D G +Q+ S++ AH +DP+ G+ I+
Sbjct: 201 SIMYSCGVY-LPEALNIEQNVDVESLPGYDD---GLFAVQDEASMMVAHVVDPRPGQIII 256
Query: 267 DMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
D C+APGGK +A ++D+G +++VD +++ I+ A +G+ C+
Sbjct: 257 DACSAPGGKAVHMAQFMKDQGRILSVDVYPHRIELIKAQCARLGVNCV 304
>gi|331269683|ref|YP_004396175.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum BKT015925]
gi|329126233|gb|AEB76178.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum BKT015925]
Length = 443
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
E I ++ I P F D G+I +Q+ +++ A ++ ++G+ +LD+C+APGGKTT
Sbjct: 212 EAIVINKGKSIESNPLFED---GKITVQDESAMLVAPTMNVEQGDLVLDLCSAPGGKTTH 268
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
I+ ++ + G+V A D NK+ ++ A +G+ I KLDA K
Sbjct: 269 ISEIMNNTGKVKAFDIHENKLNLVKDNAKRLGINNIECSKLDASK 313
>gi|281203041|gb|EFA77242.1| NOL1/NOP2/Sun family protein [Polysphondylium pallidum PN500]
Length = 403
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G Q+ S + AL+PQ GER+LDMCA+PGGKTT IASL+++ G +VA D +
Sbjct: 86 EYLAGHYIQQSASSFLPVLALEPQPGERVLDMCASPGGKTTYIASLMKNTGVLVANDINK 145
Query: 297 NKVMDIQKLAAEMGLKCITTYKLD 320
++ + +G++ LD
Sbjct: 146 ERMRSLVANIHRLGVRNTVVSNLD 169
>gi|352096314|ref|ZP_08957194.1| sun protein [Synechococcus sp. WH 8016]
gi|351677008|gb|EHA60159.1| sun protein [Synechococcus sp. WH 8016]
Length = 451
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +Q+ + A L PQ G+R+LD CAAPGGKTT +A L+ D GE+ AVDRS ++
Sbjct: 243 QGHWSVQDRSAQGVAPLLAPQPGDRVLDACAAPGGKTTHLAELMGDGGEIWAVDRSAGRL 302
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
+ A+ +G I DA
Sbjct: 303 KRVAANASRLGCASIQALAADA 324
>gi|258645366|ref|ZP_05732835.1| ribosomal RNA small subunit methyltransferase B [Dialister invisus
DSM 15470]
gi|260402715|gb|EEW96262.1| ribosomal RNA small subunit methyltransferase B [Dialister invisus
DSM 15470]
Length = 454
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G I++Q S++ A L P G+ +LDMCAAPG KTT IA+L+ + G + A D +KV
Sbjct: 241 GLIYIQTASSMIPAKVLGPDAGDHVLDMCAAPGSKTTHIAALMGNRGSIDAWDVYPHKVK 300
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDE 334
I+ A +G+ I T D++K + E+ D+
Sbjct: 301 LIKDNAKRLGISIIHTEVRDSVKPLPFLYETYDK 334
>gi|76802670|ref|YP_330765.1| rRNA methylase [Natronomonas pharaonis DSM 2160]
gi|76558535|emb|CAI50127.1| tRNA/rRNA cytosine-C5-methylase [Natronomonas pharaonis DSM 2160]
Length = 303
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 223 VDMHNRIFQLP------SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
VD H+ +F+L + + + G ++ Q S V A AL PQ GER+LD CAAPG KT
Sbjct: 55 VDWHDGLFRLGEGESPGNSWPFVHGWVYGQEEVSAVPALALAPQPGERVLDCCAAPGSKT 114
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
T +A+L+ D G +V D + ++ ++ A G+ I + DA
Sbjct: 115 TQLAALMDDRGLLVGNDNNLGRLSALRSNAERCGVTNIAVTRQDA 159
>gi|170077132|ref|YP_001733770.1| ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Synechococcus sp.
PCC 7002]
gi|169884801|gb|ACA98514.1| ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Synechococcus sp.
PCC 7002]
Length = 447
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 223 VDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASL 282
V+ I LP + EG +Q+ + + H LDPQ GE I+D CAAPGGKTT IA
Sbjct: 220 VEKRGLIQDLPGYK---EGWWTIQDASAQLVTHLLDPQPGEVIIDACAAPGGKTTHIAEK 276
Query: 283 LRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
++D G + A D+ ++ I++ A + L I T
Sbjct: 277 MQDRGTIWASDKYQARINKIEQNARRLKLSMIRT 310
>gi|449701642|gb|EMD42424.1| proliferating-cell nucleolar antigen p120, putative [Entamoeba
histolytica KU27]
Length = 503
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 44/61 (72%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
L G+ LQ+ S V+ AL PQ E+ILDMCAAPGGKTT IA+L++D G +VA D S ++
Sbjct: 273 LAGQYILQSSSSWVSVIALAPQPNEKILDMCAAPGGKTTHIAALMKDTGVLVANDISKDR 332
Query: 299 V 299
+
Sbjct: 333 L 333
>gi|313891936|ref|ZP_07825537.1| ribosomal RNA small subunit methyltransferase B [Dialister
microaerophilus UPII 345-E]
gi|313119579|gb|EFR42770.1| ribosomal RNA small subunit methyltransferase B [Dialister
microaerophilus UPII 345-E]
Length = 448
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%)
Query: 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313
A+ALDP+ E++LDMCAAPG KTT IA L+ ++G + A D +K+ I++ +G+K
Sbjct: 252 AYALDPKPYEKVLDMCAAPGSKTTQIAQLMDNKGSIDAWDLYPHKIKLIEENINRLGVKI 311
Query: 314 ITTYKLDALKAVRRKNESNDE 334
+T DA K + NE D+
Sbjct: 312 VTPKLQDATKLLPTLNEQYDK 332
>gi|238924695|ref|YP_002938211.1| sun protein [Eubacterium rectale ATCC 33656]
gi|238876370|gb|ACR76077.1| sun protein [Eubacterium rectale ATCC 33656]
Length = 469
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 11/114 (9%)
Query: 218 SEGI---AVDMHNRIFQLPSFYDVL-------EGEIFLQNLPSIVTAHALDPQKGERILD 267
+EG+ AVD N F + F D L +G ++Q++ S++ A P+KG+ ++D
Sbjct: 231 AEGVTVTAVDELNYAFVISGF-DYLNGLQSFRDGLFYVQDISSMLVAQTAAPKKGDYVID 289
Query: 268 MCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+CAAPGGK+T IA LL+ G V A D + NKV I++ GL ++ DA
Sbjct: 290 VCAAPGGKSTHIAELLQGSGHVFARDLTDNKVDMIEENIDRHGLNNMSAEVWDA 343
>gi|167540287|ref|XP_001741734.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165893617|gb|EDR21802.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 505
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
L G+ LQ+ S V+ AL PQ E+ILDMCAAPGGKTT IA+L++D G +VA D S ++
Sbjct: 275 LAGQYILQSSSSWVSVIALAPQPNEKILDMCAAPGGKTTHIAALMKDTGILVANDISKDR 334
Query: 299 VMDIQKLAAEMGL--KCITTY 317
+ + +G+ IT Y
Sbjct: 335 LKAVIGNVHRLGITNTIITNY 355
>gi|116072280|ref|ZP_01469547.1| Fmu, rRNA SAM-dependent methyltransferase [Synechococcus sp. BL107]
gi|116064802|gb|EAU70561.1| Fmu, rRNA SAM-dependent methyltransferase [Synechococcus sp. BL107]
Length = 445
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ + A LDP G+R+LD CAAPGGK T +A L+ D GE+ AVDRS ++
Sbjct: 239 EGYWCVQDRAAQWVAPLLDPNPGDRVLDACAAPGGKATHLAELMGDVGEIWAVDRSAGRL 298
Query: 300 MDIQKLAAEMGLKCI 314
+ AA +GL I
Sbjct: 299 KRVAVNAARLGLGSI 313
>gi|67479223|ref|XP_654993.1| Proliferating-cell nucleolar antigen p120 [Entamoeba histolytica
HM-1:IMSS]
gi|56472094|gb|EAL49607.1| Proliferating-cell nucleolar antigen p120, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 495
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 44/61 (72%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
L G+ LQ+ S V+ AL PQ E+ILDMCAAPGGKTT IA+L++D G +VA D S ++
Sbjct: 265 LAGQYILQSSSSWVSVIALAPQPNEKILDMCAAPGGKTTHIAALMKDTGVLVANDISKDR 324
Query: 299 V 299
+
Sbjct: 325 L 325
>gi|410658818|ref|YP_006911189.1| Ribosomal RNA small subunit methyltransferase B [Dehalobacter sp.
DCA]
gi|410661804|ref|YP_006914175.1| Ribosomal RNA small subunit methyltransferase B [Dehalobacter sp.
CF]
gi|409021173|gb|AFV03204.1| Ribosomal RNA small subunit methyltransferase B [Dehalobacter sp.
DCA]
gi|409024160|gb|AFV06190.1| Ribosomal RNA small subunit methyltransferase B [Dehalobacter sp.
CF]
Length = 471
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 56/90 (62%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L ++ G +Q+ S + AH L ++G+ +LD+C+APGGKTT +A L++++G +VA
Sbjct: 243 LDQLWEFQNGYFAVQDQSSQLAAHLLGAREGDSVLDVCSAPGGKTTHLAQLMKNKGTIVA 302
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
VD K+ I++ A +G+ I T + DA
Sbjct: 303 VDMYPQKLDLIKESAERLGITMIKTVEGDA 332
>gi|334128608|ref|ZP_08502491.1| RNA methyltransferase Sun [Centipeda periodontii DSM 2778]
gi|333386699|gb|EGK57909.1| RNA methyltransferase Sun [Centipeda periodontii DSM 2778]
Length = 448
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 211 RAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCA 270
RA ++ A EG+ +D H + +L G +Q+ S++ AH L P+ G ++D CA
Sbjct: 212 RASLY-APEGVVLDAHGALDELTPLR---MGLAQVQDESSMLVAHVLAPEPGMTVIDACA 267
Query: 271 APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
APGGKTT IA + + G ++A D K+ I++ A +G+ + DA
Sbjct: 268 APGGKTTHIAQRMENRGRILAFDIYEEKIRRIERNAQRLGISIMEAQMCDA 318
>gi|126460774|ref|YP_001057052.1| PUA domain-containing protein [Pyrobaculum calidifontis JCM 11548]
gi|126250495|gb|ABO09586.1| PUA domain containing protein [Pyrobaculum calidifontis JCM 11548]
Length = 375
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 61/279 (21%)
Query: 35 ISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISES 94
+ KA+T P +RVNT + + +++++ RL +
Sbjct: 28 LFKAITTPPPRYYVRVNTSRISANELVR----------------------RLNARGVPAY 65
Query: 95 QIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHV 154
+ +E +++ GP + K V+V +K AE+V+ GA VY PGV+ + V
Sbjct: 66 RDEHIEEAIWLPVQGPFRVPTAR------KIVVVDKKAAESVMVGADVYAPGVIK-TERV 118
Query: 155 EKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGI 214
E GD V+V + + VL+ R GL+I ++
Sbjct: 119 EVGD--EVNVVADNGVVVAFGVAVANSDEVLK---------TRRGLFIKVEKSL------ 161
Query: 215 FRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGG 274
++A +I LP + EG I+ Q+LP+I H E+ +D+ AAPGG
Sbjct: 162 YKAP---------KIRDLPEY---AEGLIYSQSLPAIAVGHVAKRLGVEKAVDLNAAPGG 209
Query: 275 KTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313
K T +A L V AVDRS +K+ +++ +GL+
Sbjct: 210 KCTHLAQL---GMRVFAVDRSWSKISRLREELKRLGLEA 245
>gi|383860508|ref|XP_003705731.1| PREDICTED: putative methyltransferase NSUN5-like [Megachile
rotundata]
Length = 563
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GEI +Q+ S + A LDP+ G +LDMCAAPG KT+ +A+L+ + G + AV+ ++
Sbjct: 210 GEILIQDKASCLAAKILDPKPGSVVLDMCAAPGMKTSHLAALMNNTGTIYAVEFDVSRYA 269
Query: 301 DIQKLAAEMGLKCITTYKLDALK 323
+ K G C+ T + DALK
Sbjct: 270 FLCKQVKATGATCVKTIQKDALK 292
>gi|218290478|ref|ZP_03494598.1| sun protein [Alicyclobacillus acidocaldarius LAA1]
gi|218239499|gb|EED06694.1| sun protein [Alicyclobacillus acidocaldarius LAA1]
Length = 451
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
A +G+ V + +L ++ D G + +Q+ +++ A L P+ G R++D+CAAPGGKT
Sbjct: 216 AEDGLRVQGQIDVTRLQAYRD---GYVTIQDEGAMLVAPLLRPEPGMRVVDLCAAPGGKT 272
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
T +A L+ D GE+ A D + KV I++ A +GL+ +
Sbjct: 273 THVAELMGDRGEIDAYDVTVAKVRAIRQQAERLGLQSV 310
>gi|443724094|gb|ELU12257.1| hypothetical protein CAPTEDRAFT_114718, partial [Capitella teleta]
Length = 423
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 224 DMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLL 283
D+H+ ++Y G I LQ+ S + A AL P G ++D CAAPG KTT +A+++
Sbjct: 197 DLHDH-----TYYKT--GLIILQDKASCIPAFALQPPPGSHVVDCCAAPGNKTTHLAAIM 249
Query: 284 RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
+++G V+A DR + + L G CI + D LK
Sbjct: 250 QNQGRVIAFDRDMKRFSTMNTLIIRAGASCIRSELKDFLK 289
>gi|119357565|ref|YP_912209.1| sun protein [Chlorobium phaeobacteroides DSM 266]
gi|119354914|gb|ABL65785.1| sun protein [Chlorobium phaeobacteroides DSM 266]
Length = 444
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G++ +QN V L+P R+LD+CAAPGGK T +A L++++G + AVDRS K+
Sbjct: 229 GKLTVQNPTQGVACLLLNPVPESRVLDLCAAPGGKATFMAELMQNKGSITAVDRSSEKLE 288
Query: 301 DIQKLAAEMGLKCITTYKLDA 321
++ A E+G+ I T DA
Sbjct: 289 KTRQHAVELGITIIKTICADA 309
>gi|440804457|gb|ELR25334.1| PUA domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 920
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 18/117 (15%)
Query: 109 GPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQ 168
GPH EP PP +V R C EAVLRGA +Y GV+A + + KGD+V+V V +
Sbjct: 259 GPHK----REPKYPP--AVVDRSCGEAVLRGAHIYAAGVIAAAGDLHKGDMVSVFVDDGK 312
Query: 169 PTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDM 225
GG +TRG + + + L++G G M R +F + G+A++M
Sbjct: 313 ----GGKTGKLTRGEFVHDAG--------NWLFVGNGRMTMGRGQMFSGTSGVAIEM 357
>gi|402467155|gb|EJW02504.1| hypothetical protein EDEG_03090 [Edhazardia aedis USNM 41457]
Length = 385
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 51/84 (60%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
GEI +QN S + AH L+P ++D CAAPG KT+ +AS++ + G++ A +++H++
Sbjct: 175 GEIIIQNYSSCLPAHVLNPPPKSFVIDACAAPGNKTSQLASIMGNTGKIFAYEKNHDRFQ 234
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
+ + A+ G+ T+ D +A
Sbjct: 235 TLNTMLAKHGVTNTETFCKDFTEA 258
>gi|308069674|ref|YP_003871279.1| ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Paenibacillus
polymyxa E681]
gi|305858953|gb|ADM70741.1| Ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Paenibacillus
polymyxa E681]
Length = 471
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L S+Y +G + +Q+ S++ A A+ P+ G +LD CAAPGGKT +A L++D G +VA
Sbjct: 248 LTSWY--TDGLLSVQDESSMLVAEAVAPEPGMLVLDCCAAPGGKTAHMAELMKDHGRIVA 305
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR 327
D +K I++ A +GL + T DAL+ R
Sbjct: 306 NDLHAHKHQLIREQANRLGLDAVETVTGDALELKER 341
>gi|239826566|ref|YP_002949190.1| sun protein [Geobacillus sp. WCH70]
gi|239806859|gb|ACS23924.1| sun protein [Geobacillus sp. WCH70]
Length = 447
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G I +Q+ S++ A AL P++ ER+LD CAAPGGK+T IA L+ + G+V+ D +KV
Sbjct: 231 GWITIQDESSMLVARALGPKEHERVLDSCAAPGGKSTHIAELMNNTGQVICADIHEHKVN 290
Query: 301 DIQKLAAEMGLKCITTYKLDA 321
I++ A + L I+ LD+
Sbjct: 291 LIEENAKRLQLTNISARVLDS 311
>gi|288931958|ref|YP_003436018.1| RNA methylase, NOL1/NOP2/sun family [Ferroglobus placidus DSM
10642]
gi|288894206|gb|ADC65743.1| RNA methylase, NOL1/NOP2/sun family [Ferroglobus placidus DSM
10642]
Length = 446
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 59/101 (58%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G+ +Q S + + LDP+ GE ++D+CAAPGGKT +A L+++ G + A D ++
Sbjct: 233 KGKFVIQEEASALASILLDPKPGEVVVDLCAAPGGKTLHMAELMKNRGVIHAFDIDELRL 292
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNS 340
+++L G++ + YK DA KA + ES + M ++
Sbjct: 293 KRMEELIERCGIRIVKIYKKDARKATKILGESVADKVMLDA 333
>gi|428221462|ref|YP_007105632.1| ribosomal RNA small subunit methyltransferase RsmB [Synechococcus
sp. PCC 7502]
gi|427994802|gb|AFY73497.1| ribosomal RNA small subunit methyltransferase RsmB [Synechococcus
sp. PCC 7502]
Length = 441
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
+PS EG +Q+ + +T LDPQ E I+D CAAPGGKTT IA L+ ++G + A
Sbjct: 222 IPSLVGFTEGLWTVQDASAQLTGLILDPQPNETIIDACAAPGGKTTHIAELMGNQGLIYA 281
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESN 332
DR+ +++ +Q+ +GL + D+ + +N+++
Sbjct: 282 CDRTASRLQKLQQNCDRLGLSIVQIRVGDSREFADFQNQAD 322
>gi|354565440|ref|ZP_08984615.1| sun protein [Fischerella sp. JSC-11]
gi|353549399|gb|EHC18841.1| sun protein [Fischerella sp. JSC-11]
Length = 491
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 228 RIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEG 287
+I LP F +G +Q+ + + H LDPQ E ++D CAAPGGKTT IA L++D G
Sbjct: 266 QIQNLPGFN---QGWWSIQDSSAQLVGHFLDPQIKEVVIDSCAAPGGKTTHIAELMQDTG 322
Query: 288 EVVAVDRSHNKVMDIQKLAAEMGLKCI 314
++ A DR+ +++ +Q+ + LK I
Sbjct: 323 KIWACDRTASRMRKLQENMQRLHLKSI 349
>gi|150402304|ref|YP_001329598.1| NOL1/NOP2/sun family RNA methylase [Methanococcus maripaludis C7]
gi|150033334|gb|ABR65447.1| putative RNA methylase, NOL1/NOP2/sun family [Methanococcus
maripaludis C7]
Length = 265
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 230 FQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEV 289
F + S + L G FLQ++ SI+ + L+P K + +LDMCAAPGGKTT +A L+ +EG +
Sbjct: 46 FSMGSTPEYLLGYYFLQSISSIIPSITLNPSKDDDVLDMCAAPGGKTTHLAQLMENEGSI 105
Query: 290 VAVDRSHNKVMDIQKLAAEMGLK---CITTYKLDALKAVRRKNESNDEPNMCNS-KDNNY 345
+AV+ + N++ ++ MG K I T ++ K +R D P N KD+N
Sbjct: 106 LAVEINKNRLKSLRSNINRMGFKNTLMINTNAVNLDKKLRFDKILLDAPCTGNEIKDSNR 165
Query: 346 ITSQ 349
+ ++
Sbjct: 166 VKTK 169
>gi|227890677|ref|ZP_04008482.1| 16S rRNA m(5)C 967 methyltransferase [Lactobacillus salivarius ATCC
11741]
gi|227867615|gb|EEJ75036.1| 16S rRNA m(5)C 967 methyltransferase [Lactobacillus salivarius ATCC
11741]
Length = 445
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIA-SLLRDEGEVV 290
LP + G++ +Q+ +++ ++D QK + +LD CAAPGGKTT IA L++ EG+V
Sbjct: 222 LPKSSEFRNGKMIIQDESAMLAVESMDIQKDDIVLDACAAPGGKTTQIAEKLMKGEGKVW 281
Query: 291 AVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAV 325
A+D +KV I++ A ++GL I+ +LDA KA+
Sbjct: 282 ALDIHKHKVKLIEENANKLGLISKISAKQLDARKAI 317
>gi|15644260|ref|NP_229312.1| sun protein [Thermotoga maritima MSB8]
gi|418045570|ref|ZP_12683665.1| sun protein [Thermotoga maritima MSB8]
gi|4982078|gb|AAD36579.1|AE001799_11 sun protein [Thermotoga maritima MSB8]
gi|351676455|gb|EHA59608.1| sun protein [Thermotoga maritima MSB8]
Length = 431
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%)
Query: 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
G R+LD CAAPGGKTTAIA L++D+G+++AVD S K+ ++K A + L I T DA
Sbjct: 238 GLRVLDTCAAPGGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIETKIADA 297
>gi|403253553|ref|ZP_10919854.1| 16S rRNA methyltransferase B [Thermotoga sp. EMP]
gi|402811087|gb|EJX25575.1| 16S rRNA methyltransferase B [Thermotoga sp. EMP]
Length = 431
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%)
Query: 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
G R+LD CAAPGGKTTAIA L++D+G+++AVD S K+ ++K A + L I T DA
Sbjct: 238 GLRVLDTCAAPGGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIETKIADA 297
>gi|170289195|ref|YP_001739433.1| sun protein [Thermotoga sp. RQ2]
gi|170176698|gb|ACB09750.1| sun protein [Thermotoga sp. RQ2]
Length = 431
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%)
Query: 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
G R+LD CAAPGGKTTAIA L++D+G+++AVD S K+ ++K A + L I T DA
Sbjct: 238 GLRVLDTCAAPGGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIETKIADA 297
>gi|420156785|ref|ZP_14663625.1| ribosomal RNA small subunit methyltransferase B [Clostridium sp.
MSTE9]
gi|394756795|gb|EJF39854.1| ribosomal RNA small subunit methyltransferase B [Clostridium sp.
MSTE9]
Length = 447
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+L S + +DPQ GERI+D+CAAPGGK+ +A + + GE++A D+ KV
Sbjct: 233 EGLFHIQDLSSQLCCALIDPQPGERIIDVCAAPGGKSFTMAERMENRGELLAFDKYRGKV 292
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
I++ A +G I DA
Sbjct: 293 GLIRQGAERLGFSVIRASVRDA 314
>gi|284165311|ref|YP_003403590.1| RNA methylase [Haloterrigena turkmenica DSM 5511]
gi|284014966|gb|ADB60917.1| RNA methylase, NOL1/NOP2/sun family [Haloterrigena turkmenica DSM
5511]
Length = 302
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 16/115 (13%)
Query: 219 EGIA---VDMHNRIFQLP---------SFYDVLEGEIFLQNLPSIVTAHALDPQKGERIL 266
EG+A D + R+ +L SF+ G+ + +P +V LDPQ GER+
Sbjct: 48 EGLAYEQADWNPRVLRLETGSPGSTWTSFHGFTHGQEEVSAVPPVV----LDPQPGERVW 103
Query: 267 DMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
D CAAPGGK T +A+L+ DEG VVA D + ++ ++ A +G + DA
Sbjct: 104 DSCAAPGGKATQLAALMGDEGTVVANDNNLGRISALRFNAERLGATSLAVTNADA 158
>gi|258511305|ref|YP_003184739.1| sun protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|257478031|gb|ACV58350.1| sun protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
Length = 451
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
A +G+ V + +L ++ D G + +Q+ +++ A L P+ G R++D+CAAPGGKT
Sbjct: 216 AEDGLRVQGQVDVTRLQAYRD---GYVTIQDEGAMLVAPLLRPEPGMRVVDLCAAPGGKT 272
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
T +A L+ D GE+ A D + KV I++ A +GL+ +
Sbjct: 273 THLAELMGDRGEIDAYDVTVAKVRAIRQQAERLGLQSV 310
>gi|452992003|emb|CCQ96625.1| Ribosomal RNA small subunit methyltransferase B [Clostridium
ultunense Esp]
Length = 453
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%)
Query: 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304
+Q+ S++ A L P+ G+R+LD CAAPGGKT+ IA L++DEGE++A D +K I++
Sbjct: 241 IQDESSMLVATLLKPEAGQRVLDACAAPGGKTSHIAELMKDEGEILANDIHPHKGSLIEE 300
Query: 305 LAAEMGLKCITTYKLDALKAVRR 327
+G I DAL R
Sbjct: 301 QKKRLGFTSIQVMTGDALTLPER 323
>gi|448502993|ref|ZP_21612857.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum coriense
DSM 10284]
gi|445693395|gb|ELZ45547.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum coriense
DSM 10284]
Length = 315
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 223 VDMHNRIFQLPS-----FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
V H+ +F+LP + + G Q S++ ALDP+ GER+ D CAAPG KTT
Sbjct: 55 VGWHDGLFRLPDGNPGGNWPYVHGWTHGQEEVSVLPTLALDPEPGERVWDACAAPGSKTT 114
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
IA + DEG VVA D + ++ ++ A +G+ DA
Sbjct: 115 QIADAMDDEGTVVANDNNLGRLSALRHNAERLGITNAIVTNQDA 158
>gi|366089306|ref|ZP_09455779.1| 16S rRNA m(5)C 967 methyltransferase [Lactobacillus acidipiscis
KCTC 13900]
Length = 448
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G++ +Q+ + ++ +++ Q +++LDMCAAPGGKTT IA L D G V A+D NK+
Sbjct: 234 GQVTVQDESASLSVESMNIQPDDQVLDMCAAPGGKTTQIAEHLNDNGHVEALDIHKNKLR 293
Query: 301 DIQKLAAEMGL-KCITTYKLDALKA 324
IQ+ M L + +TT LDA K+
Sbjct: 294 LIQRNVDRMHLSESVTTRALDARKS 318
>gi|384135896|ref|YP_005518610.1| Fmu (Sun) domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339289981|gb|AEJ44091.1| Fmu (Sun) domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 477
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 236 YDVLE--GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEG--EVVA 291
Y VL G +LQ+ ++ A ALDPQ GERILD+CAAPGGKTT A L G ++VA
Sbjct: 79 YTVLHQAGAFYLQDPSAMAVAVALDPQPGERILDLCAAPGGKTTHAALLAARRGGAQLVA 138
Query: 292 VDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKAV 325
D ++V+ + + +G C IT +AL A
Sbjct: 139 NDIHRDRVLALAENVERVGAPCAITNEPPEALAAA 173
>gi|168186789|ref|ZP_02621424.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum C str. Eklund]
gi|169295225|gb|EDS77358.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum C str. Eklund]
Length = 443
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
E I ++ I + P F EG+I +Q+ +++ A ++D ++G +LD+C+APGGKTT
Sbjct: 212 EAIVINKGKSIEKNPLFK---EGKITVQDESAMLVAPSIDAKEGATVLDLCSAPGGKTTH 268
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
I+ ++ + G V A D NK+ +++ A +G+ I ++DA K + S D
Sbjct: 269 ISEIMNNTGIVKAFDIHDNKISLVKENAKRLGINNIACAEMDACKFNKELENSAD 323
>gi|298712110|emb|CBJ32991.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 605
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G LQ+ S+ AL PQ+GER+LDM AAPGGK+T IA L+R+ G V+A D
Sbjct: 434 EYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKSTYIAQLMRNTGVVIANDLRP 493
Query: 294 -RSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR 327
R V ++ +L L C + K V R
Sbjct: 494 QRQRATVANLHRLGVRNALVCCHDGRKIPFKGVDR 528
>gi|83589751|ref|YP_429760.1| sun protein [Moorella thermoacetica ATCC 39073]
gi|83572665|gb|ABC19217.1| sun protein [Moorella thermoacetica ATCC 39073]
Length = 457
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
A EG+ V+ + PSF EG ++Q+ S + +HAL P G ++D AAPGGKT
Sbjct: 218 APEGLVVEGLGALEASPSFQ---EGLFYVQDEGSQLVSHALHPDSGAWVIDASAAPGGKT 274
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
T +A L+ D G ++A D ++ I +G+ C+ T +DA + R + D
Sbjct: 275 THLAQLMADRGTILACDVHRGRLDLIAANCRRLGVTCVRTVLVDARELGERYPAAAD 331
>gi|89098704|ref|ZP_01171586.1| sun protein [Bacillus sp. NRRL B-14911]
gi|89086666|gb|EAR65785.1| sun protein [Bacillus sp. NRRL B-14911]
Length = 448
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 8/96 (8%)
Query: 226 HNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD 285
H+R F+ EG + +Q+ S++ A+AL +K +LD CAAPGGKTT IA L +
Sbjct: 224 HSRAFK--------EGYLSIQDESSMLAAYALGAEKDNHVLDACAAPGGKTTHIAEKLGN 275
Query: 286 EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
G+V+++D +KV I A +GL I T +D+
Sbjct: 276 TGQVISLDLHEHKVKLIADNARRLGLSNIETKAMDS 311
>gi|448392533|ref|ZP_21567307.1| RNA methylase [Haloterrigena salina JCM 13891]
gi|445664623|gb|ELZ17332.1| RNA methylase [Haloterrigena salina JCM 13891]
Length = 302
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
SF+ G+ + +P +V LDPQ GER+ D CAAPGGK T +A+L+ DEG VVA D
Sbjct: 75 SFHGFTHGQEEVSAVPPVV----LDPQPGERVWDSCAAPGGKATQLAALMDDEGTVVAND 130
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ ++ ++ A +G + DA
Sbjct: 131 NNLGRISALRFNAERLGATSLAVTNADA 158
>gi|385805084|ref|YP_005841482.1| PUA domain containing protein [Fervidicoccus fontis Kam940]
gi|383794947|gb|AFH42030.1| PUA domain containing protein [Fervidicoccus fontis Kam940]
Length = 414
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 36/199 (18%)
Query: 126 VIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVL 185
VI K AE V+ G+ +++PG + + ++G+ VAV
Sbjct: 121 VIADIKAAERVMLGSDLFMPGALKVVNG-KRGEEVAV----------------------- 156
Query: 186 QGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHN---RIFQLPSFYDVLEGE 242
+G +G G + + + GIAV + ++ +L S EG
Sbjct: 157 ---------VSENGYVVGSGILDIDPSEVNPKKRGIAVRIERSPYKMVKLNSLDIFKEGY 207
Query: 243 IFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDI 302
I+ Q+ PS++ HA P++G+ I D+ A+PGGK + R + E A D ++ KV +
Sbjct: 208 IYDQSFPSMLLIHASSPREGDVIADLTASPGGKISHAYEFTRGKAEYYAFDHTNAKVEKV 267
Query: 303 QKLAAEMGLKCITTYKLDA 321
++ +G + + YK D+
Sbjct: 268 EETMRRLGHENVKVYKADS 286
>gi|121533700|ref|ZP_01665527.1| sun protein [Thermosinus carboxydivorans Nor1]
gi|121307691|gb|EAX48606.1| sun protein [Thermosinus carboxydivorans Nor1]
Length = 442
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
A EGI + + +L S G +Q+ S+ AH L P+ G+ ++D C APGGK+
Sbjct: 211 APEGILCHEYPALSKLASLR---AGLFQVQDESSMTVAHVLSPRPGDFVIDACGAPGGKS 267
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
T IA+L+ ++G+V+A D +K+ ++ A +G+ + T LDA+K
Sbjct: 268 THIAALMGNKGKVLATDIYEHKLALMRDNAVRLGISILETQLLDAVK 314
>gi|16329552|ref|NP_440280.1| Fmu and Fmv protein [Synechocystis sp. PCC 6803]
gi|383321293|ref|YP_005382146.1| Fmu and Fmv protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383324463|ref|YP_005385316.1| Fmu and Fmv protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490347|ref|YP_005408023.1| Fmu and Fmv protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384435613|ref|YP_005650337.1| Fmu and Fmv protein [Synechocystis sp. PCC 6803]
gi|451813711|ref|YP_007450163.1| Fmu and Fmv protein [Synechocystis sp. PCC 6803]
gi|2500952|sp|P72943.1|RSMB_SYNY3 RecName: Full=Ribosomal RNA small subunit methyltransferase B;
AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase
RsmB
gi|1652035|dbj|BAA16960.1| Fmu and Fmv protein [Synechocystis sp. PCC 6803]
gi|339272645|dbj|BAK49132.1| Fmu and Fmv protein [Synechocystis sp. PCC 6803]
gi|359270612|dbj|BAL28131.1| Fmu and Fmv protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359273783|dbj|BAL31301.1| Fmu and Fmv protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359276953|dbj|BAL34470.1| Fmu and Fmv protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407957432|dbj|BAM50672.1| Fmu and Fmv protein [Synechocystis sp. PCC 6803]
gi|451779680|gb|AGF50649.1| Fmu and Fmv protein [Synechocystis sp. PCC 6803]
Length = 446
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I QLP F EG +Q+ + A L+PQ E I D+CAAPGGKTT IA L+ D+G+
Sbjct: 223 ITQLPGFA---EGWWTVQDASAQWVAQILNPQPEETIFDVCAAPGGKTTHIAELMGDQGQ 279
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
+ A DR ++ + +GL I ++ D
Sbjct: 280 IYAGDRHGWRLQKLAVTQQRLGLTSIKIWEGD 311
>gi|11499905|ref|NP_071149.1| fmu and fmv protein [Archaeoglobus fulgidus DSM 4304]
gi|2648195|gb|AAB88932.1| fmu and fmv protein [Archaeoglobus fulgidus DSM 4304]
Length = 437
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 51/75 (68%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+ +Q+L S +HAL+P G+ ++D+ AAPG KT +A L+++EG +VAVD S ++V
Sbjct: 228 EGKYVIQDLASCFVSHALNPSPGDVVIDLAAAPGMKTAHMAMLMQNEGRIVAVDNSPSRV 287
Query: 300 MDIQKLAAEMGLKCI 314
++ ++G+K +
Sbjct: 288 RRMRSKLKQLGVKNV 302
>gi|410255004|gb|JAA15469.1| NOP2/Sun domain family, member 5 [Pan troglodytes]
gi|410255006|gb|JAA15470.1| NOP2/Sun domain family, member 5 [Pan troglodytes]
gi|410339407|gb|JAA38650.1| NOP2/Sun domain family, member 5 [Pan troglodytes]
gi|410339409|gb|JAA38651.1| NOP2/Sun domain family, member 5 [Pan troglodytes]
Length = 466
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEG---IAVDMHNRIFQLPSFYDVLE------GEI 243
YF+R G Y G+ +++ RA +G + + + P+ D+ E G +
Sbjct: 153 YFKRQGFSYQGRASSLDD----LRALKGKHFLLDSLMPELLVFPAQTDLHEHPLYRAGHL 208
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
LQ+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 209 ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 268
Query: 304 KLAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 269 TLLARAGVSCCELAEEDFL 287
>gi|421074228|ref|ZP_15535268.1| sun protein [Pelosinus fermentans JBW45]
gi|392527734|gb|EIW50820.1| sun protein [Pelosinus fermentans JBW45]
Length = 443
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
EGI + + L S D G +Q+ S++ AH L P+ E I+D C APGGK+T
Sbjct: 213 EGIVCHSYPALSTLKSLRD---GLFQIQDESSMLVAHVLAPKPDEFIIDACGAPGGKSTH 269
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
IA+L+ ++G V++ D +K+ Q+ A +GL I LDA
Sbjct: 270 IATLMENKGRVLSTDIYEHKLALTQENAQRLGLTIIDVQSLDA 312
>gi|333910084|ref|YP_004483817.1| RNA methylase [Methanotorris igneus Kol 5]
gi|333750673|gb|AEF95752.1| RNA methylase, NOL1/NOP2/sun family [Methanotorris igneus Kol 5]
Length = 264
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Query: 232 LPSFYDVLE-------------GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
LP ++VLE G F+Q++ S++ L+P K + +LDMCAAPGGKTT
Sbjct: 34 LPYAFEVLESPFSVGATPEYLFGYYFVQSISSMIPPIVLNPSKDDLVLDMCAAPGGKTTH 93
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322
+A L+ +EG ++AV+ +++ ++ MG+ + ++ L
Sbjct: 94 LAQLMNNEGAIIAVEIKSSRMKSLKANINRMGIANVIMLNMNVL 137
>gi|254423387|ref|ZP_05037105.1| ribosomal RNA small subunit methyltransferase B [Synechococcus sp.
PCC 7335]
gi|196190876|gb|EDX85840.1| ribosomal RNA small subunit methyltransferase B [Synechococcus sp.
PCC 7335]
Length = 491
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
+ QLP + EG +Q+ + + ++ LDPQ GE I+D CAAPGGK+ IA L+R+EG
Sbjct: 271 VTQLPGYA---EGWWAVQDSSAQLVSYLLDPQPGEVIIDACAAPGGKSLHIAELMRNEGT 327
Query: 289 VVAVDRSHNKVMDIQKLAAEMG 310
V + DR+ ++ IQ+ +G
Sbjct: 328 VWSCDRTSSRTKKIQQNIDRLG 349
>gi|426356600|ref|XP_004045648.1| PREDICTED: putative methyltransferase NSUN5-like [Gorilla gorilla
gorilla]
Length = 466
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEG---IAVDMHNRIFQLPSFYDVLE------GEI 243
YF+R G Y G+ +++ RA +G + + + P+ D+ E G +
Sbjct: 153 YFKRQGFSYQGRASSLDD----LRALKGKHFLLDSLMPELLVFPTQTDLHEHPLYRAGHL 208
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
LQ+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 209 ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 268
Query: 304 KLAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 269 TLLARAGVSCCELAEEDFL 287
>gi|269839713|ref|YP_003324405.1| RNA methylase [Thermobaculum terrenum ATCC BAA-798]
gi|269791443|gb|ACZ43583.1| RNA methylase, NOL1/NOP2/sun family [Thermobaculum terrenum ATCC
BAA-798]
Length = 325
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+I+LQ+L S+V L P+ GER+LD+ AAPG KTT +A+L+ + GE+VA D S +
Sbjct: 91 EGKIYLQDLASMVPVLVLAPRPGERVLDLAAAPGSKTTQMAALMGNSGEIVANDVSPARR 150
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
KL A + + ++ ++ A++
Sbjct: 151 F---KLVANLRQQGVSIARVTAIR 171
>gi|421500980|ref|ZP_15947961.1| ribosomal RNA small subunit methyltransferase B [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
gi|402266693|gb|EJU16112.1| ribosomal RNA small subunit methyltransferase B [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
Length = 432
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 54/82 (65%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG++ +Q+ S + A L + GE +LD C+APGGKT+ +A +++EG+++++D +K+
Sbjct: 219 EGKMIVQDAASYLAAKNLGAKAGEIVLDTCSAPGGKTSVLAEEMKNEGQILSLDIHTHKI 278
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
IQ+ ++G+ + KLDA
Sbjct: 279 KLIQENCKKLGITIVQAVKLDA 300
>gi|332867777|ref|XP_519138.3| PREDICTED: putative methyltransferase NSUN5 [Pan troglodytes]
Length = 470
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEG---IAVDMHNRIFQLPSFYDVLE------GEI 243
YF+R G Y G+ +++ RA +G + + + P+ D+ E G +
Sbjct: 153 YFKRQGFSYQGRASSLDD----LRALKGKHFLLDSLMPELLVFPAQTDLHEHPLYRAGHL 208
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
LQ+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 209 ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 268
Query: 304 KLAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 269 TLLARAGVSCCELAEEDFL 287
>gi|189067497|dbj|BAG37756.1| unnamed protein product [Homo sapiens]
Length = 466
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEG---IAVDMHNRIFQLPSFYDVLE------GEI 243
YF+R G Y G+ +++ RA +G + + + P+ D+ E G +
Sbjct: 153 YFKRQGFSYQGRASSLDD----LRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHL 208
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
LQ+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 209 ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 268
Query: 304 KLAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 269 TLLARAGVSCCELAEEDFL 287
>gi|325287453|ref|YP_004263243.1| Fmu (Sun) domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324322907|gb|ADY30372.1| Fmu (Sun) domain protein [Cellulophaga lytica DSM 7489]
Length = 403
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 63/105 (60%), Gaps = 3/105 (2%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
+F+ +F +G +Q+ S + H LD + G+R++D CA GGKT IA+L+ ++G+
Sbjct: 195 VFRTEAFK---KGMFEMQDASSQLVGHFLDVKPGQRVVDTCAGAGGKTLHIAALMENKGQ 251
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
++A+D NK+ ++++ A G I T ++D+ K +++ S D
Sbjct: 252 LIALDIYGNKLKELKRRAKRDGAHNIETREIDSTKVIKKLYNSAD 296
>gi|340755287|ref|ZP_08691980.1| ribosomal RNA small subunit methyltransferase B [Fusobacterium sp.
D12]
gi|419841505|ref|ZP_14364874.1| ribosomal RNA small subunit methyltransferase B [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
gi|313687543|gb|EFS24378.1| ribosomal RNA small subunit methyltransferase B [Fusobacterium sp.
D12]
gi|386905031|gb|EIJ69812.1| ribosomal RNA small subunit methyltransferase B [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
Length = 432
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 54/82 (65%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG++ +Q+ S + A L + GE +LD C+APGGKT+ +A +++EG+++++D +K+
Sbjct: 219 EGKMIVQDAASYLAAKNLGAKAGEIVLDTCSAPGGKTSVLAEEMKNEGQILSLDIHTHKI 278
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
IQ+ ++G+ + KLDA
Sbjct: 279 KLIQENCKKLGITIVQAVKLDA 300
>gi|23199998|ref|NP_683759.1| putative methyltransferase NSUN5 isoform 1 [Homo sapiens]
gi|21552754|gb|AAM62310.1|AF412028_1 Williams-Beuren syndrome critical region protein 20 copy A [Homo
sapiens]
gi|14165561|gb|AAH08084.1| NOL1/NOP2/Sun domain family, member 5 [Homo sapiens]
gi|37674386|gb|AAQ96839.1| unknown [Homo sapiens]
gi|119590101|gb|EAW69695.1| hCG39703, isoform CRA_d [Homo sapiens]
gi|123990710|gb|ABM83920.1| NOL1/NOP2/Sun domain family, member 5 [synthetic construct]
gi|123999331|gb|ABM87241.1| NOL1/NOP2/Sun domain family, member 5 [synthetic construct]
gi|307684594|dbj|BAJ20337.1| NOP2/Sun domain family, member 5 [synthetic construct]
Length = 466
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEG---IAVDMHNRIFQLPSFYDVLE------GEI 243
YF+R G Y G+ +++ RA +G + + + P+ D+ E G +
Sbjct: 153 YFKRQGFSYQGRASSLDD----LRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHL 208
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
LQ+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 209 ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 268
Query: 304 KLAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 269 TLLARAGVSCCELAEEDFL 287
>gi|385840289|ref|YP_005863613.1| 16S ribosomal RNA m(5)C 967 methyltransferase [Lactobacillus
salivarius CECT 5713]
gi|300214410|gb|ADJ78826.1| 16S ribosomal RNA m(5)C 967 methyltransferase [Lactobacillus
salivarius CECT 5713]
Length = 445
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIA-SLLRDEGEVV 290
LP + G++ +Q+ +++ ++D QK + +LD CAAPGGKTT IA L++ EG+V
Sbjct: 222 LPKSSEFRNGKMIIQDESAMLAVESMDIQKDDIVLDACAAPGGKTTQIAEKLMKGEGKVW 281
Query: 291 AVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAV 325
A+D +KV I++ A ++GL ++ +LDA KA+
Sbjct: 282 ALDIHKHKVKLIEENANKLGLISKVSAKQLDARKAI 317
>gi|90961592|ref|YP_535508.1| 16S rRNA m(5)C 967 methyltransferase [Lactobacillus salivarius
UCC118]
gi|301299300|ref|ZP_07205586.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|90820786|gb|ABD99425.1| 16S rRNA m(5)C 967 methyltransferase [Lactobacillus salivarius
UCC118]
gi|300853144|gb|EFK80742.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 445
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIA-SLLRDEGEVV 290
LP + G++ +Q+ +++ ++D QK + +LD CAAPGGKTT IA L++ EG+V
Sbjct: 222 LPKSSEFRNGKMIIQDESAMLAVESMDIQKDDIVLDACAAPGGKTTQIAEKLMKGEGKVW 281
Query: 291 AVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAV 325
A+D +KV I++ A ++GL ++ +LDA KA+
Sbjct: 282 ALDIHKHKVKLIEENANKLGLISKVSAKQLDARKAI 317
>gi|402297531|ref|ZP_10817298.1| 16S rRNA methyltransferase B [Bacillus alcalophilus ATCC 27647]
gi|401727206|gb|EJT00399.1| 16S rRNA methyltransferase B [Bacillus alcalophilus ATCC 27647]
Length = 448
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%)
Query: 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKL 305
Q+ S++ A AL P+ GE ILD CAAPGGK+T IA L+ +EG +++VD +KV I++
Sbjct: 236 QDESSMLVAKALGPKAGEHILDSCAAPGGKSTHIAELMNNEGSLLSVDLHEHKVQLIREQ 295
Query: 306 AAEMGLKCITTYKLD 320
A + L I D
Sbjct: 296 AKRLDLSMIEVVAAD 310
>gi|427736995|ref|YP_007056539.1| ribosomal RNA small subunit methyltransferase RsmB [Rivularia sp.
PCC 7116]
gi|427372036|gb|AFY55992.1| ribosomal RNA small subunit methyltransferase RsmB [Rivularia sp.
PCC 7116]
Length = 459
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I LP F EG +Q+ + + ++ L+PQ E I+D CAAPGGKTT IA L+ D G+
Sbjct: 237 IKNLPGFN---EGWWTVQDSSAQLVSYLLNPQPHEVIIDACAAPGGKTTHIAELMGDTGQ 293
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCI 314
+ A DR+ +++ +Q+ + LK +
Sbjct: 294 IYACDRTESRLRKLQQNTQRLNLKSV 319
>gi|300121088|emb|CBK21470.2| unnamed protein product [Blastocystis hominis]
Length = 690
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
+ L G LQ+ S++ AL+PQ ERILDMCAAPGGKTT IA L+++ G +VA D
Sbjct: 254 EYLAGHYMLQSASSMLPVMALNPQPNERILDMCAAPGGKTTHIAQLMKNTGVLVAND 310
>gi|119590102|gb|EAW69696.1| hCG39703, isoform CRA_e [Homo sapiens]
Length = 428
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEG---IAVDMHNRIFQLPSFYDVLE------GEI 243
YF+R G Y G+ +++ RA +G + + + P+ D+ E G +
Sbjct: 115 YFKRQGFSYQGRASSLDD----LRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHL 170
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
LQ+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 171 ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 230
Query: 304 KLAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 231 TLLARAGVSCCELAEEDFL 249
>gi|448409715|ref|ZP_21574842.1| tRNA and rRNA cytosine-C5-methylase [Halosimplex carlsbadense
2-9-1]
gi|445672486|gb|ELZ25058.1| tRNA and rRNA cytosine-C5-methylase [Halosimplex carlsbadense
2-9-1]
Length = 312
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 223 VDMHNRIFQLP-----SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
V H+ +F LP + + + G I Q S V A LDPQ GER+ D CAAPG KTT
Sbjct: 55 VGWHDGLFALPDDQPGTNWPYVLGWIHGQEEVSAVPAAVLDPQPGERVWDACAAPGSKTT 114
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+A+L+ D G +VA D + ++ ++ A G + DA
Sbjct: 115 QLAALMDDTGLLVATDNNLGRISALRSNAERAGATNVAVTHEDA 158
>gi|379728828|ref|YP_005321024.1| ribosomal RNA small subunit methyltransferase B [Saprospira grandis
str. Lewin]
gi|378574439|gb|AFC23440.1| ribosomal RNA small subunit methyltransferase B [Saprospira grandis
str. Lewin]
Length = 405
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 226 HNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD 285
NR F Y+ EG +Q+ S AH L PQ G ++D CA GGK+ +A+L+++
Sbjct: 191 QNRKFTHLKSYE--EGWFEVQDYASQQLAHFLKPQAGRYLVDACAGAGGKSLHLAALMKN 248
Query: 286 EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
GE++++D S +K+ +++K A G+ I T K+ A
Sbjct: 249 RGEILSMDLSEHKLKELRKRAKRAGVSIIKTEKIPA 284
>gi|229581588|ref|YP_002839987.1| RNA methylase [Sulfolobus islandicus Y.N.15.51]
gi|228012304|gb|ACP48065.1| RNA methylase, NOL1/NOP2/sun family [Sulfolobus islandicus
Y.N.15.51]
Length = 339
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 208 MMSRAGIFRASEGIAVDMHNRIFQ----LPSFYDVLE---GEIFLQNLPSIVTAHALDPQ 260
MMS G E + H I + +PS LE G +Q L S+V A+ L+P
Sbjct: 81 MMSEKGFIL--EKVKWLQHGYIIKRTPPMPSLGSTLEYLMGYYHIQGLASMVPAYVLNPS 138
Query: 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
+ + +LDM AAPGGKTT ++ +++++G VVAV++ +++ + +G + + K D
Sbjct: 139 QDDFVLDMAAAPGGKTTQVSQIMQNKGLVVAVEKKRSRIRALLSNVNRLGAENVVLVKTD 198
Query: 321 ALKAVRRKNE 330
L +RR N+
Sbjct: 199 VLN-LRRINK 207
>gi|315230766|ref|YP_004071202.1| ribosomal RNA small subunit methyltransferase B [Thermococcus
barophilus MP]
gi|315183794|gb|ADT83979.1| ribosomal RNA small subunit methyltransferase B [Thermococcus
barophilus MP]
Length = 465
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+I +Q S V + LDP+ G ++D+ AAPGGKT+ IA L+R++G++ A D ++
Sbjct: 252 EGKILVQEEASAVASLILDPKPGMTVVDLAAAPGGKTSHIAELMRNKGKIYAFDIDEFRI 311
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
++++ MG+ + + D KA
Sbjct: 312 KRMKEILKRMGVNIVKIIRKDGRKA 336
>gi|14521455|ref|NP_126931.1| proliferating-cell nucleolar antigen P120, [Pyrococcus abyssi GE5]
gi|5458674|emb|CAB50161.1| Sun/NOL1/NOP2 nucleolar protein [Pyrococcus abyssi GE5]
gi|380742059|tpe|CCE70693.1| TPA: proliferating-cell nucleolar antigen P120, putative
[Pyrococcus abyssi GE5]
Length = 449
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 52/85 (61%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G+I +Q S V + L+PQ GE I+D+ AAPGGKTT +A L++++G++ A D ++
Sbjct: 238 KGKIIVQEEASAVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRM 297
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
+++ MG+K + D KA
Sbjct: 298 KRLKEFVNRMGIKIVKPIIKDGRKA 322
>gi|390459010|ref|XP_002743979.2| PREDICTED: putative methyltransferase NSUN5 isoform 1 [Callithrix
jacchus]
Length = 466
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 12/138 (8%)
Query: 194 YFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQL---PSFYDVLE------GEIF 244
YF+R G + QG A S A RA +G + + +L P+ D+ E G +
Sbjct: 153 YFKRKG-FSYQGRA--SSADDLRALKGKRFLLDPVVPELLAFPAQTDLHEHPLYRAGHLI 209
Query: 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304
LQ+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 210 LQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLSSMAT 269
Query: 305 LAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 270 LLARAGVSCCELAEDDFL 287
>gi|290968496|ref|ZP_06560035.1| ribosomal RNA small subunit methyltransferase B [Megasphaera
genomosp. type_1 str. 28L]
gi|290781492|gb|EFD94081.1| ribosomal RNA small subunit methyltransferase B [Megasphaera
genomosp. type_1 str. 28L]
Length = 442
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 13/147 (8%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G +Q+ S + AH LDPQ G+ +LD+CAAPGGKTT IASL + V D +K+
Sbjct: 232 GRAMIQDEASQLVAHVLDPQPGDVVLDVCAAPGGKTTHIASLGGSDCLVYGADIYEHKLQ 291
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEP---------NMCNSKDNNYITSQTS 351
I++ A ++ L I T DA++ R D + K + +
Sbjct: 292 LIRENAEKLHLTNIRTILQDAVRIGERFPAKADRVLVDAPCSGLGILRRKLDLRWRKKEQ 351
Query: 352 DSMKLHKEVPSIAAEGLNGDKSCKEKG 378
D M+L PS+ LNG +C + G
Sbjct: 352 DLMRL----PSLQTRILNGAAACVKPG 374
>gi|344228747|gb|EGV60633.1| NOL1/NOP2/sun family putative RNA met [Candida tenuis ATCC 10573]
Length = 357
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G+ LQ S + ALDPQ+ ERILDM AAPGGKTT I++L+++ G V A D
Sbjct: 63 EYLAGQYILQAASSFLPVMALDPQENERILDMAAAPGGKTTYISALMKNTGCVFANDANK 122
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R+ + + +I +L + + C
Sbjct: 123 ARTKSLIANIHRLGCKNTIVC 143
>gi|310828894|ref|YP_003961251.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308740628|gb|ADO38288.1| hypothetical protein ELI_3326 [Eubacterium limosum KIST612]
Length = 441
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G +Q+ ++ A L P+K +R+LDMCAAPGGKTT ++ ++ +EG ++A D +++
Sbjct: 237 GCFMIQDQGAMKAARLLGPEKTDRVLDMCAAPGGKTTHLSQIMENEGTIIARDIFDSRLK 296
Query: 301 DIQKLAAEMGLKCITTYKLD 320
I++ AA +G+ I T K D
Sbjct: 297 LIEETAARLGICNIETEKTD 316
>gi|335049751|ref|ZP_08542737.1| ribosomal RNA small subunit methyltransferase B [Megasphaera sp.
UPII 199-6]
gi|333762246|gb|EGL39750.1| ribosomal RNA small subunit methyltransferase B [Megasphaera sp.
UPII 199-6]
Length = 442
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 13/147 (8%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G +Q+ S + AH LDPQ G+ +LD+CAAPGGKTT IASL + V D +K+
Sbjct: 232 GRAMIQDEASQLVAHVLDPQPGDVVLDVCAAPGGKTTHIASLGGPDCLVYGADIYEHKLQ 291
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEP---------NMCNSKDNNYITSQTS 351
I++ A ++ L I T DA++ R D + K + +
Sbjct: 292 LIRENAKKLQLSNIRTILQDAVRIGERFPAKADRVLVDAPCSGLGILRRKLDLRWRKKEQ 351
Query: 352 DSMKLHKEVPSIAAEGLNGDKSCKEKG 378
D M+L PS+ LNG +C + G
Sbjct: 352 DLMRL----PSLQTRILNGAAACVKTG 374
>gi|257051428|ref|YP_003129261.1| RNA methylase, NOL1/NOP2/sun family [Halorhabdus utahensis DSM
12940]
gi|256690191|gb|ACV10528.1| RNA methylase, NOL1/NOP2/sun family [Halorhabdus utahensis DSM
12940]
Length = 302
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 8/121 (6%)
Query: 209 MSRAGIFRASEGIA---VDMHNRIFQLP-----SFYDVLEGEIFLQNLPSIVTAHALDPQ 260
+ RA +EGI VD H+ + +LP S + ++G + Q S + LDP
Sbjct: 38 VERAKTALETEGITYETVDWHDGLLRLPDDNPGSNWPYVQGWLHGQEEVSALPPVVLDPD 97
Query: 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
G+R+ D AAPG KTT +A+L+ DEG +VA D + ++ ++ A +G+ + D
Sbjct: 98 PGDRVWDATAAPGSKTTQLAALMDDEGAIVATDNNLGRLSALRSNAERLGVTNLAVTNED 157
Query: 321 A 321
A
Sbjct: 158 A 158
>gi|152149576|pdb|2B9E|A Chain A, Human Nsun5 Protein
Length = 309
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLE------GEIFLQ 246
YF+R G Y G+ +++ + + + + + P+ D+ E G + LQ
Sbjct: 29 YFKRQGFSYQGRASSLDDLRAL-KGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQ 87
Query: 247 NLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA 306
+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++ + L
Sbjct: 88 DRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 147
Query: 307 AEMGLKCITTYKLDAL 322
A G+ C + D L
Sbjct: 148 ARAGVSCCELAEEDFL 163
>gi|118444654|ref|YP_878315.1| sun protein [Clostridium novyi NT]
gi|118135110|gb|ABK62154.1| sun protein [Clostridium novyi NT]
Length = 443
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
E I ++ I + P F EG+I +Q+ +++ A ++D ++G +LD+C+APGGKTT
Sbjct: 212 EAIVINKGKSIEKNPLFK---EGKITVQDESAMLVAPSIDAKEGATVLDLCSAPGGKTTH 268
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
I+ ++ + G V A D NK+ +++ A +G+ I+ ++DA K + S D
Sbjct: 269 ISEIMNNTGIVKAFDIHENKLSLVKENAKRLGIDNISCAEMDASKFNKELENSAD 323
>gi|347523381|ref|YP_004780951.1| Fmu (Sun) domain containing protein [Pyrolobus fumarii 1A]
gi|343460263|gb|AEM38699.1| Fmu (Sun) domain protein [Pyrolobus fumarii 1A]
Length = 477
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
Query: 236 YDVL----EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
YD L EG+I Q+ S + A LDP+ GERI+D+ AAPGGKT +A L R + E+VA
Sbjct: 247 YDQLHLLKEGKIIPQDDSSALAAIILDPKPGERIIDLTAAPGGKTIHLAELSRVQAEIVA 306
Query: 292 VDRSHNKVMDIQKLAAEMG 310
+D H++++ + ++A G
Sbjct: 307 LDVFHDRMLRLVEMAKRTG 325
>gi|422344990|ref|ZP_16425913.1| ribosomal RNA small subunit methyltransferase B [Selenomonas noxia
F0398]
gi|355376132|gb|EHG23393.1| ribosomal RNA small subunit methyltransferase B [Selenomonas noxia
F0398]
Length = 448
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
EG+ + H + L + EG +Q S++ AH L P+ G ++D CAAPGGKTT
Sbjct: 219 EGVILRAHGALNVLAPLH---EGLAQVQGESSMLVAHVLAPEPGMTVIDACAAPGGKTTH 275
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
IA + + G ++A D K+ I++ A + + I T LDA
Sbjct: 276 IAQRMENRGRILAFDIYEEKIRRIERNAKRLSVSIIETAVLDA 318
>gi|188585963|ref|YP_001917508.1| sun protein [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350650|gb|ACB84920.1| sun protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 462
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 56/94 (59%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G +Q++ S+V +H DPQ+G+ I+D+C+APG KTT + L+ +G ++AVD +++
Sbjct: 235 GYFQVQDINSMVVSHLCDPQQGDNIIDLCSAPGSKTTHLVQLIDGQGSILAVDIHEHRLK 294
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNESNDE 334
+++ + + + + D K + R + N++
Sbjct: 295 LVKEACRRLQVNNVNVKQADGTKLISRDQQENNK 328
>gi|429728017|ref|ZP_19262762.1| ribosomal RNA small subunit methyltransferase B, partial
[Peptostreptococcus anaerobius VPI 4330]
gi|429150689|gb|EKX93586.1| ribosomal RNA small subunit methyltransferase B, partial
[Peptostreptococcus anaerobius VPI 4330]
Length = 464
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 49/74 (66%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G I +Q++ S++ A AL+P+K ++LD+CAAPGGK+ I +++D G V+A D +K+
Sbjct: 254 GYISVQDISSMMVARALNPKKNSKVLDLCAAPGGKSCHIGEMMKDSGSVLACDVFDHKIK 313
Query: 301 DIQKLAAEMGLKCI 314
I+ + +GL I
Sbjct: 314 LIKAYSNRLGLTNI 327
>gi|300711849|ref|YP_003737663.1| tRNA and rRNA cytosine-C5-methylase [Halalkalicoccus jeotgali B3]
gi|448295539|ref|ZP_21485603.1| tRNA and rRNA cytosine-C5-methylase [Halalkalicoccus jeotgali B3]
gi|299125532|gb|ADJ15871.1| tRNA and rRNA cytosine-C5-methylase [Halalkalicoccus jeotgali B3]
gi|445583638|gb|ELY37967.1| tRNA and rRNA cytosine-C5-methylase [Halalkalicoccus jeotgali B3]
Length = 302
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 233 PSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAV 292
P F+ + G+ + +LP+ V L P GER+LD CAAPGGKT IA+L+ D G VVA
Sbjct: 74 PYFHGWIHGQEEVSSLPATV----LSPDPGERVLDACAAPGGKTAQIAALMDDTGLVVAN 129
Query: 293 DRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
D + ++ ++ A +GL + + DA
Sbjct: 130 DNNLGRLSALRFNAERLGLTNVAVTRQDA 158
>gi|193785163|dbj|BAG54316.1| unnamed protein product [Homo sapiens]
Length = 391
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLE------GEIFLQ 246
YF+R G Y G+ +++ + + + + + P+ D+ E G + LQ
Sbjct: 115 YFKRQGFSYQGRASSLDDLRAL-KGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQ 173
Query: 247 NLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA 306
+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++ + L
Sbjct: 174 DRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 233
Query: 307 AEMGLKCITTYKLDAL 322
A G+ C + D L
Sbjct: 234 ARAGVSCCELAEEDFL 249
>gi|335438273|ref|ZP_08561021.1| RNA methylase, NOL1/NOP2/sun family protein [Halorhabdus tiamatea
SARL4B]
gi|334892467|gb|EGM30700.1| RNA methylase, NOL1/NOP2/sun family protein [Halorhabdus tiamatea
SARL4B]
Length = 302
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 8/121 (6%)
Query: 209 MSRAGIFRASEGIA---VDMHNRIFQLP-----SFYDVLEGEIFLQNLPSIVTAHALDPQ 260
+ RA +EGIA V+ H+ + +LP S + ++G + Q S + LDP
Sbjct: 38 VERAKAALETEGIAYEAVEWHDGLLRLPDDSPGSNWPYVQGWLHGQEEVSALPPVVLDPS 97
Query: 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
G+R+ D AAPG KTT +A+L+ DEG +VA D + ++ ++ A +G+ + D
Sbjct: 98 PGDRVWDATAAPGSKTTQLAALMHDEGTIVATDNNLGRLSALRSNAERLGVTNLAVTNED 157
Query: 321 A 321
A
Sbjct: 158 A 158
>gi|134045502|ref|YP_001096988.1| ribosomal RNA methyltransferase NOP2 [Methanococcus maripaludis C5]
gi|132663127|gb|ABO34773.1| ribosomal RNA methyltransferase NOP2 [Methanococcus maripaludis C5]
Length = 277
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 54/83 (65%)
Query: 230 FQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEV 289
F + S + L G FLQ++ SI+ + L+P K + +LDMCAAPGGKTT +A L+ +EG +
Sbjct: 58 FSMGSTPEYLLGYYFLQSISSIIPSITLNPTKDDDLLDMCAAPGGKTTHLAQLMENEGSI 117
Query: 290 VAVDRSHNKVMDIQKLAAEMGLK 312
+AV+ + N++ ++ MG K
Sbjct: 118 LAVEINKNRLKSLRSNINRMGFK 140
>gi|289422320|ref|ZP_06424170.1| ribosomal RNA small subunit methyltransferase B [Peptostreptococcus
anaerobius 653-L]
gi|289157265|gb|EFD05880.1| ribosomal RNA small subunit methyltransferase B [Peptostreptococcus
anaerobius 653-L]
Length = 446
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 49/74 (66%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G I +Q++ S++ A AL+P+K ++LD+CAAPGGK+ I +++D G V+A D +K+
Sbjct: 236 GYISVQDISSMMVARALNPKKNSKVLDLCAAPGGKSCHIGEMMKDSGSVLACDVFDHKIK 295
Query: 301 DIQKLAAEMGLKCI 314
I+ + +GL I
Sbjct: 296 LIKAYSNRLGLTNI 309
>gi|270288816|ref|NP_001161819.1| putative methyltransferase NSUN5 isoform 3 [Homo sapiens]
gi|194389950|dbj|BAG60491.1| unnamed protein product [Homo sapiens]
Length = 470
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEG---IAVDMHNRIFQLPSFYDVLE------GEI 243
YF+R G Y G+ +++ RA +G + + + P+ D+ E G +
Sbjct: 153 YFKRQGFSYQGRASSLDD----LRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHL 208
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
LQ+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 209 ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 268
Query: 304 KLAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 269 TLLARAGVSCCELAEEDFL 287
>gi|270288818|ref|NP_001161820.1| putative methyltransferase NSUN5 isoform 4 [Homo sapiens]
gi|119590100|gb|EAW69694.1| hCG39703, isoform CRA_c [Homo sapiens]
Length = 391
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLE------GEIFLQ 246
YF+R G Y G+ +++ + + + + + P+ D+ E G + LQ
Sbjct: 115 YFKRQGFSYQGRASSLDDLRAL-KGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQ 173
Query: 247 NLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA 306
+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++ + L
Sbjct: 174 DRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 233
Query: 307 AEMGLKCITTYKLDAL 322
A G+ C + D L
Sbjct: 234 ARAGVSCCELAEEDFL 249
>gi|421858977|ref|ZP_16291226.1| tRNA and rRNA cytosine-C5-methylase [Paenibacillus popilliae ATCC
14706]
gi|410831496|dbj|GAC41663.1| tRNA and rRNA cytosine-C5-methylase [Paenibacillus popilliae ATCC
14706]
Length = 454
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ AL P+ G RILD CAAPGGK+T IA + D GEV A D KV
Sbjct: 224 GRLSVQDESSMLVVEALRPEPGMRILDCCAAPGGKSTHIAERMGDRGEVTANDVHAYKVG 283
Query: 301 DIQKLAAEMGLKCITTYKLDA 321
I++ A +GL + +DA
Sbjct: 284 LIEEQATRLGLTSLHVMNVDA 304
>gi|116492597|ref|YP_804332.1| tRNA and rRNA cytosine-C5-methylase [Pediococcus pentosaceus ATCC
25745]
gi|116102747|gb|ABJ67890.1| tRNA and rRNA cytosine-C5-methylase [Pediococcus pentosaceus ATCC
25745]
Length = 444
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
++G++ +Q+ +++ A + +KG+++LD CAAPGGKTT IA+++ + GEV D +
Sbjct: 230 IDGDLTVQDESAMLVAETMHLEKGQKVLDACAAPGGKTTQIAAMIGETGEVTGWDIYQKR 289
Query: 299 VMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
V IQ A M L+ + T DA+ +ES D
Sbjct: 290 VQLIQDNAQRMHLENVKTEVQDAIAPREDLDESFD 324
>gi|397690734|ref|YP_006527988.1| Ribosomal RNA small subunit methyltransferase B [Melioribacter
roseus P3M]
gi|395812226|gb|AFN74975.1| Ribosomal RNA small subunit methyltransferase B [Melioribacter
roseus P3M]
Length = 457
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 48/67 (71%)
Query: 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
L P+ G R+LD+CAAPGGK+ IA ++++EGE+VA+DR +++ ++K + + + T
Sbjct: 263 LKPEPGMRVLDLCAAPGGKSAFIADMMKNEGEIVALDRFDSRLKILEKNLERLKVTNVRT 322
Query: 317 YKLDALK 323
+ +DAL+
Sbjct: 323 HAIDALE 329
>gi|427711378|ref|YP_007060002.1| ribosomal RNA small subunit methyltransferase RsmB [Synechococcus
sp. PCC 6312]
gi|427375507|gb|AFY59459.1| ribosomal RNA small subunit methyltransferase RsmB [Synechococcus
sp. PCC 6312]
Length = 458
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 236 YDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRS 295
YD +G +Q+ + + + LDPQ GE I+D CAAPGGKTT IA ++D G V+A+DR
Sbjct: 242 YD--KGWWSVQDAAAQLVTYLLDPQPGETIIDACAAPGGKTTHIAERMQDRGTVIALDRV 299
Query: 296 HNKVMDIQKLAAEMGLKCITTYKLDA 321
+++ +++ + L C+ D+
Sbjct: 300 ASRLRKLKQNQQRLQLTCLQAQLADS 325
>gi|313894854|ref|ZP_07828414.1| ribosomal RNA small subunit methyltransferase B [Selenomonas sp.
oral taxon 137 str. F0430]
gi|312976535|gb|EFR41990.1| ribosomal RNA small subunit methyltransferase B [Selenomonas sp.
oral taxon 137 str. F0430]
Length = 451
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
+GI V H L + + EG +Q+ S++ AH L G ++D CAAPGGKTT
Sbjct: 222 DGIVVTSHG---TLDALAPLREGLCQVQDESSMLVAHVLGAAPGMTVIDACAAPGGKTTH 278
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
IA + + G++ A D K+ I+ A +G+ I T+ LDA
Sbjct: 279 IAQRMENRGKIYAFDVYEGKIARIENNARRLGIDIIETWMLDA 321
>gi|332159509|ref|YP_004424788.1| fmu protein [Pyrococcus sp. NA2]
gi|331034972|gb|AEC52784.1| fmu protein [Pyrococcus sp. NA2]
Length = 451
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G+I +Q S V + L+PQ GE ++D+ AAPGGKTT +A L++++G++ A D ++
Sbjct: 240 KGKIIVQEEASAVASIVLNPQPGEIVVDLAAAPGGKTTHMAELMKNKGKIYAFDIDKMRM 299
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
+++ MG+K + DA KA
Sbjct: 300 KRLKEFVQRMGIKIVKPIIKDARKA 324
>gi|113954299|ref|YP_729912.1| sun protein [Synechococcus sp. CC9311]
gi|113881650|gb|ABI46608.1| sun protein [Synechococcus sp. CC9311]
Length = 449
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +Q+ + A L P+ G+RILD CAAPGGK T +A L+ D GE+ AVDRS ++
Sbjct: 245 QGHWSVQDRSAQGVAPLLAPRPGDRILDACAAPGGKATHLAELMGDGGEIWAVDRSAGRL 304
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRKNE 330
+ AA +G I DA + ++ E
Sbjct: 305 KRVAANAARLGCGSIHALAADATNLLEQQPE 335
>gi|16226071|gb|AAL16067.1|AF420249_1 NOL1R [Homo sapiens]
Length = 429
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLE------GEIFLQ 246
YF+R G Y G+ +++ + + + + + P+ D+ E G + LQ
Sbjct: 153 YFKRQGFSYQGRASSLDDLRAL-KGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQ 211
Query: 247 NLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA 306
+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++ + L
Sbjct: 212 DRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 271
Query: 307 AEMGLKCITTYKLDAL 322
A G+ C + D L
Sbjct: 272 ARAGVSCCELAEEDFL 287
>gi|300709045|ref|XP_002996691.1| hypothetical protein NCER_100191 [Nosema ceranae BRL01]
gi|239606011|gb|EEQ83020.1| hypothetical protein NCER_100191 [Nosema ceranae BRL01]
Length = 362
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+I +QN+ S + A+ LDP RI+D CAAPG KT+ +++LL++ G+V A++ +
Sbjct: 153 EGKIVIQNIASCLPAYILDPLPNSRIIDACAAPGNKTSHLSNLLKNTGKVYAIEVDSKRF 212
Query: 300 MDIQKLAAEMGLKCITTYKLDAL 322
+ ++GLK + T D
Sbjct: 213 KILNYHVNKLGLKNVETINKDFF 235
>gi|373112396|ref|ZP_09526628.1| ribosomal RNA small subunit methyltransferase B [Fusobacterium
necrophorum subsp. funduliforme 1_1_36S]
gi|371655815|gb|EHO21153.1| ribosomal RNA small subunit methyltransferase B [Fusobacterium
necrophorum subsp. funduliforme 1_1_36S]
Length = 385
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 54/82 (65%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG++ +Q+ S + A L + GE +LD C+APGGKT+ +A +++EG+++++D +K+
Sbjct: 172 EGKMIVQDAASYLAAKNLGAKAGEIVLDTCSAPGGKTSVLAEDMKNEGQILSLDIHTHKI 231
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
IQ+ ++G+ + KLDA
Sbjct: 232 KLIQENCKKLGITIVQAVKLDA 253
>gi|340750427|ref|ZP_08687271.1| ribosomal RNA small subunit methyltransferase B [Fusobacterium
mortiferum ATCC 9817]
gi|229420063|gb|EEO35110.1| ribosomal RNA small subunit methyltransferase B [Fusobacterium
mortiferum ATCC 9817]
Length = 433
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 54/84 (64%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G+I +Q+ S ++A L+P+ E +LD C+APGGKT + L+ + GE++A+D +K+
Sbjct: 220 DGKIIVQDASSYLSARNLNPKPDESVLDTCSAPGGKTAVLGELMENRGELLALDIYPHKL 279
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ + G+ + T K+DA K
Sbjct: 280 KLIEENCHKCGVDIVRTVKMDARK 303
>gi|448491986|ref|ZP_21608654.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum
californiensis DSM 19288]
gi|445692204|gb|ELZ44385.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum
californiensis DSM 19288]
Length = 319
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 223 VDMHNRIFQLPS-----FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
VD H+ +F+LP + + G Q S++ AL P+ GER+ D CAAPG KTT
Sbjct: 55 VDWHDGLFRLPEGNPGGNWPYVHGWTHGQEEVSVLPTLALAPRPGERVWDACAAPGSKTT 114
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
IA + DEG VVA D + ++ ++ A +G+ DA
Sbjct: 115 QIADAMDDEGTVVANDNNLGRLSALRHNAERLGITNAIVTNQDA 158
>gi|163745468|ref|ZP_02152828.1| rRNA methyltransferase RsmB [Oceanibulbus indolifex HEL-45]
gi|161382286|gb|EDQ06695.1| rRNA methyltransferase RsmB [Oceanibulbus indolifex HEL-45]
Length = 423
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Query: 227 NRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDE 286
++ +P F EG+ ++Q+ + + L P++GER+LD+CAAPGGKT +A+
Sbjct: 202 GQVSAMPGFA---EGDWWVQDAAAAIPVRVLAPKEGERVLDLCAAPGGKTMQLAAA---G 255
Query: 287 GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318
EV AVD+SH ++ +++ +GLK T K
Sbjct: 256 AEVTAVDQSHPRMQRVKENLTRVGLKAKTLTK 287
>gi|8922322|ref|NP_060514.1| putative methyltransferase NSUN5 isoform 2 [Homo sapiens]
gi|118573085|sp|Q96P11.2|NSUN5_HUMAN RecName: Full=Putative methyltransferase NSUN5; AltName:
Full=NOL1-related protein; Short=NOL1R; AltName:
Full=NOL1/NOP2/Sun domain family member 5; AltName:
Full=Williams-Beuren syndrome chromosomal region 20A
protein
gi|7022196|dbj|BAA91515.1| unnamed protein product [Homo sapiens]
gi|37674385|gb|AAQ96838.1| unknown [Homo sapiens]
gi|119590098|gb|EAW69692.1| hCG39703, isoform CRA_a [Homo sapiens]
Length = 429
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLE------GEIFLQ 246
YF+R G Y G+ +++ + + + + + P+ D+ E G + LQ
Sbjct: 153 YFKRQGFSYQGRASSLDDLRAL-KGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQ 211
Query: 247 NLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA 306
+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++ + L
Sbjct: 212 DRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 271
Query: 307 AEMGLKCITTYKLDAL 322
A G+ C + D L
Sbjct: 272 ARAGVSCCELAEEDFL 287
>gi|260944772|ref|XP_002616684.1| hypothetical protein CLUG_03925 [Clavispora lusitaniae ATCC 42720]
gi|238850333|gb|EEQ39797.1| hypothetical protein CLUG_03925 [Clavispora lusitaniae ATCC 42720]
Length = 599
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G LQ S + ALDPQ+ ER+LDM AAPGGKTT I++L+++ G V A D
Sbjct: 309 EYLAGHYILQAASSFLPVMALDPQENERVLDMAAAPGGKTTYISALMKNTGCVFANDANK 368
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R+ + + +IQ+L + + C
Sbjct: 369 ARTKSLIANIQRLGCKNTIVC 389
>gi|182420429|ref|ZP_02951648.1| ribosomal RNA small subunit methyltransferase B [Clostridium
butyricum 5521]
gi|237668664|ref|ZP_04528648.1| ribosomal RNA small subunit methyltransferase B [Clostridium
butyricum E4 str. BoNT E BL5262]
gi|182375715|gb|EDT73315.1| ribosomal RNA small subunit methyltransferase B [Clostridium
butyricum 5521]
gi|237657012|gb|EEP54568.1| ribosomal RNA small subunit methyltransferase B [Clostridium
butyricum E4 str. BoNT E BL5262]
Length = 438
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 56/84 (66%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+I +Q+ +++ A LD ++G ++D+C+APGGKTT IA +L + G+V+A D +K+
Sbjct: 226 EGKITVQDESAMLVAPLLDLKEGMTVVDLCSAPGGKTTHIAEILGNTGKVLAFDLHESKL 285
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ +G+ +TT+ DA K
Sbjct: 286 GLIKENCERLGITNVTTFAQDATK 309
>gi|448400491|ref|ZP_21571411.1| RNA methylase, NOL1/NOP2/sun family protein [Haloterrigena limicola
JCM 13563]
gi|445667211|gb|ELZ19856.1| RNA methylase, NOL1/NOP2/sun family protein [Haloterrigena limicola
JCM 13563]
Length = 303
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
SF+ G+ + +P++V LDPQ GER+ D CAAPGGK T +A+L+ D G VVA D
Sbjct: 75 SFHGFTHGQEEVSAVPAVV----LDPQPGERVWDSCAAPGGKATQLAALMDDRGTVVAND 130
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ ++ ++ A +G + DA
Sbjct: 131 NNLGRISALRFNAERLGATSLAVTNADA 158
>gi|428298107|ref|YP_007136413.1| sun protein [Calothrix sp. PCC 6303]
gi|428234651|gb|AFZ00441.1| sun protein [Calothrix sp. PCC 6303]
Length = 448
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Query: 220 GIAVDMHN-RIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
G+ + HN RI LP F L+G +Q+ + + + LDP+ E I+D CAAPGGKTT
Sbjct: 214 GLRLLGHNGRIQDLPGF---LDGWWTVQDSSAQLVGYLLDPKLNEVIIDTCAAPGGKTTH 270
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
IA L+ D+G + A DR+ +++ +++ + ++ I T
Sbjct: 271 IAELMEDQGTIWACDRTASRMGKLKENIQRLQIQSIRT 308
>gi|147921688|ref|YP_684492.1| tRNA/rRNA cytosine-C5-methylase [Methanocella arvoryzae MRE50]
gi|110619888|emb|CAJ35166.1| putative tRNA/rRNA cytosine-C5-methylase (Nop2/Sun family)
[Methanocella arvoryzae MRE50]
Length = 316
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 52/86 (60%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
L G ++Q+ S++ AL P G+ ++DM A+PGGKTT IA L+ +EG +VA+++ +
Sbjct: 97 LLGYFYVQDKSSMIPPLALAPNPGDTVIDMAASPGGKTTHIAQLMNNEGLIVAIEKEPGR 156
Query: 299 VMDIQKLAAEMGLKCITTYKLDALKA 324
+ ++ G+ Y +DAL+A
Sbjct: 157 IPSLRTNIGRCGVMNTAIYNMDALEA 182
>gi|325849117|ref|ZP_08170609.1| putative ribosomal RNA small subunit methyltransferase B
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480362|gb|EGC83425.1| putative ribosomal RNA small subunit methyltransferase B
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 426
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ SI L+P+K +ILD+CAAPG KT+ +A L + +VA D S NK+
Sbjct: 224 EGLFTIQSEASIKVCEVLNPEKNSQILDLCAAPGTKTSFLAELCENSSRIVANDISFNKL 283
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
I + +GLK I DA
Sbjct: 284 SKINENIKRLGLKNIEITNFDA 305
>gi|403286054|ref|XP_003934322.1| PREDICTED: putative methyltransferase NSUN5 [Saimiri boliviensis
boliviensis]
Length = 380
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 12/138 (8%)
Query: 194 YFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQL---PSFYDVLE------GEIF 244
YF+R G + QG A S RA +G + + +L P+ D+ E G +
Sbjct: 67 YFKRKG-FSYQGRA--SSVDDLRALKGKRFLLDPLVPELLVFPTQTDLHEHPLYQAGHLI 123
Query: 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304
LQ+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 124 LQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMAT 183
Query: 305 LAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 184 LLARAGVSCCELAEEDFL 201
>gi|345004833|ref|YP_004807686.1| RNA methylase [halophilic archaeon DL31]
gi|344320459|gb|AEN05313.1| RNA methylase, NOL1/NOP2/sun family [halophilic archaeon DL31]
Length = 318
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 223 VDMHNRIFQLP-----SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
VD H+R+ +LP + + + G + Q S + A ALDP G+R+LD CAAPG KT
Sbjct: 55 VDWHDRLLKLPEGSPGTNWAYVHGWLHGQEEVSALPALALDPDPGDRVLDSCAAPGSKTC 114
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+A L+ D G +V D + ++ ++ A +G+ + DA
Sbjct: 115 HLADLMDDTGVLVGNDNNLGRISALRHNAERLGVSNLVVTNRDA 158
>gi|448305486|ref|ZP_21495416.1| RNA methylase, NOL1/NOP2/sun family protein [Natronorubrum
sulfidifaciens JCM 14089]
gi|445588256|gb|ELY42500.1| RNA methylase, NOL1/NOP2/sun family protein [Natronorubrum
sulfidifaciens JCM 14089]
Length = 303
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 16/115 (13%)
Query: 219 EGIA---VDMHNRIFQLP---------SFYDVLEGEIFLQNLPSIVTAHALDPQKGERIL 266
EG+A D + R+ +L SF+ + G+ + +P +V LDPQ GER+
Sbjct: 48 EGVAYEQADWNPRVVRLETDSPGSTWTSFHGLTHGQEEVSAVPPVV----LDPQPGERVW 103
Query: 267 DMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
D CAAPGGK T +A+L+ D G VVA D + ++ ++ A +G + DA
Sbjct: 104 DSCAAPGGKATQLAALMDDRGTVVANDNNLGRISALRFNAERLGATSLAVTNADA 158
>gi|430750393|ref|YP_007213301.1| ribosomal RNA small subunit methyltransferase RsmB [Thermobacillus
composti KWC4]
gi|430734358|gb|AGA58303.1| ribosomal RNA small subunit methyltransferase RsmB [Thermobacillus
composti KWC4]
Length = 459
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+GE +Q+ +++ A A DP+ G R+LD CAAPGGK+T +A L+ D G V+A D +K
Sbjct: 236 DGEWTVQDEAAMLVAEACDPEPGMRVLDCCAAPGGKSTHLAELMGDVGVVLANDIHPHKE 295
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR 327
I + A +GL + T DA + RR
Sbjct: 296 RLIVEQAQRLGLTSVRTSVCDAAELPRR 323
>gi|313225604|emb|CBY07078.1| unnamed protein product [Oikopleura dioica]
Length = 700
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ+ S + AL PQ+GE++LDMCAAPGGKTT I+ L+++ G V+A D++
Sbjct: 271 EYLAGHYMLQSASSFLPVMALAPQEGEKVLDMCAAPGGKTTYISQLMKNTGMVLANDKNK 330
Query: 297 NKVMDIQKLAAEMGLKCITTYKLD 320
++ + + +G + T D
Sbjct: 331 LRMKALVANSHRLGCSNVATCNYD 354
>gi|433591369|ref|YP_007280865.1| NOL1/NOP2/sun family putative RNA methylase [Natrinema pellirubrum
DSM 15624]
gi|448332956|ref|ZP_21522175.1| RNA methylase, NOL1/NOP2/sun family protein [Natrinema pellirubrum
DSM 15624]
gi|433306149|gb|AGB31961.1| NOL1/NOP2/sun family putative RNA methylase [Natrinema pellirubrum
DSM 15624]
gi|445624492|gb|ELY77873.1| RNA methylase, NOL1/NOP2/sun family protein [Natrinema pellirubrum
DSM 15624]
Length = 302
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 207 AMMSRAGIFRASEGIA---VDMHNRIFQL---------PSFYDVLEGEIFLQNLPSIVTA 254
A + RA +EG+A D + R+ L SF+ G+ + +P +V
Sbjct: 36 ASVDRALATLEAEGLAYEQADWNPRVLDLETDSPGSTWASFHGFTHGQEEVSAVPPVV-- 93
Query: 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
LDP+ GER+ D CAAPGGK T IA+L+ D G VVA D + ++ ++ A +G +
Sbjct: 94 --LDPEPGERVWDCCAAPGGKATQIAALMDDRGTVVANDNNLGRISALRFNAERLGATSL 151
Query: 315 TTYKLDA 321
DA
Sbjct: 152 AVTNADA 158
>gi|448385826|ref|ZP_21564120.1| RNA methylase, NOL1/NOP2/sun family protein [Haloterrigena
thermotolerans DSM 11522]
gi|445656236|gb|ELZ09075.1| RNA methylase, NOL1/NOP2/sun family protein [Haloterrigena
thermotolerans DSM 11522]
Length = 302
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 207 AMMSRAGIFRASEGIA---VDMHNRIFQL---------PSFYDVLEGEIFLQNLPSIVTA 254
A + RA +EG+A D + R+ L SF+ G+ + +P +V
Sbjct: 36 ASVDRALATLEAEGLAYEQADWNPRVLDLETDSPGSTWASFHGFTHGQEEVSAVPPVV-- 93
Query: 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
LDP+ GER+ D CAAPGGK T IA+L+ D G VVA D + ++ ++ A +G +
Sbjct: 94 --LDPEPGERVWDCCAAPGGKATQIAALMDDRGTVVANDNNLGRISALRFNAERLGATSL 151
Query: 315 TTYKLDA 321
DA
Sbjct: 152 AVTNADA 158
>gi|307244450|ref|ZP_07526559.1| ribosomal RNA small subunit methyltransferase B [Peptostreptococcus
stomatis DSM 17678]
gi|306492143|gb|EFM64187.1| ribosomal RNA small subunit methyltransferase B [Peptostreptococcus
stomatis DSM 17678]
Length = 447
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 177 LGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFY 236
L + R + G D + G I QG G+ E I V I + P F
Sbjct: 179 LRVNRTKLRPGQSMDYLVGQIIGRIIDQGLEASRVEGL---EEAIKVKGLKSIDKHPLFR 235
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
EG + +Q++ SI+ A ++P++ R+LD+CAAPGGK+T I L+ + G +++ D
Sbjct: 236 ---EGYVSVQDISSILVAKVMNPKRESRVLDLCAAPGGKSTHIGELMENTGHLISQDIFD 292
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDAL 322
+K+ + A +GL + DAL
Sbjct: 293 HKIKLMNTYARRLGLNNMEARLGDAL 318
>gi|206901447|ref|YP_002251151.1| ribosomal RNA small subunit methyltransferase B [Dictyoglomus
thermophilum H-6-12]
gi|206740550|gb|ACI19608.1| ribosomal RNA small subunit methyltransferase B [Dictyoglomus
thermophilum H-6-12]
Length = 430
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 54/82 (65%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G +Q+ S++ A L+P+ G R++D+C+APG K+T +A L+ ++G++V+VD + N+V
Sbjct: 223 GYFVIQSEASMLPALILNPEPGSRVIDLCSAPGLKSTHLAELMNNKGKIVSVDINKNRVK 282
Query: 301 DIQKLAAEMGLKCITTYKLDAL 322
+++ A +G+ I T D L
Sbjct: 283 LVEENAKRLGISIIETLAEDVL 304
>gi|227828150|ref|YP_002829930.1| RNA methylase [Sulfolobus islandicus M.14.25]
gi|229585379|ref|YP_002843881.1| RNA methylase [Sulfolobus islandicus M.16.27]
gi|238620340|ref|YP_002915166.1| RNA methylase [Sulfolobus islandicus M.16.4]
gi|385773820|ref|YP_005646387.1| RNA methylase [Sulfolobus islandicus HVE10/4]
gi|385776455|ref|YP_005649023.1| RNA methylase [Sulfolobus islandicus REY15A]
gi|227459946|gb|ACP38632.1| RNA methylase, NOL1/NOP2/sun family [Sulfolobus islandicus M.14.25]
gi|228020429|gb|ACP55836.1| RNA methylase, NOL1/NOP2/sun family [Sulfolobus islandicus M.16.27]
gi|238381410|gb|ACR42498.1| RNA methylase, NOL1/NOP2/sun family [Sulfolobus islandicus M.16.4]
gi|323475203|gb|ADX85809.1| RNA methylase, NOL1/NOP2/sun family [Sulfolobus islandicus REY15A]
gi|323477935|gb|ADX83173.1| RNA methylase, NOL1/NOP2/sun family [Sulfolobus islandicus HVE10/4]
Length = 339
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L S + L G +Q L S+V A+ L+P + + +LDM AAPGGKTT ++ +++++G VVA
Sbjct: 110 LGSTLEYLMGYYHIQGLASMVPAYVLNPSQDDFVLDMAAAPGGKTTQVSQIMQNKGLVVA 169
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNE 330
V++ +++ + +G + + K D L +RR N+
Sbjct: 170 VEKKRSRIRALLSNVNRLGAENVVLVKTDVLN-LRRINK 207
>gi|227830857|ref|YP_002832637.1| RNA methylase [Sulfolobus islandicus L.S.2.15]
gi|229579743|ref|YP_002838142.1| RNA methylase [Sulfolobus islandicus Y.G.57.14]
gi|284998364|ref|YP_003420132.1| RNA methylase [Sulfolobus islandicus L.D.8.5]
gi|227457305|gb|ACP35992.1| RNA methylase, NOL1/NOP2/sun family [Sulfolobus islandicus
L.S.2.15]
gi|228010458|gb|ACP46220.1| RNA methylase, NOL1/NOP2/sun family [Sulfolobus islandicus
Y.G.57.14]
gi|284446260|gb|ADB87762.1| putative RNA methylase, NOL1/NOP2/sun family [Sulfolobus islandicus
L.D.8.5]
Length = 339
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L S + L G +Q L S+V A+ L+P + + +LDM AAPGGKTT ++ +++++G VVA
Sbjct: 110 LGSTLEYLMGYYHIQGLASMVPAYVLNPSQDDFVLDMAAAPGGKTTQVSQIMQNKGLVVA 169
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNE 330
V++ +++ + +G + + K D L +RR N+
Sbjct: 170 VEKKRSRIRALLSNVNRLGAENVVLVKTDVLN-LRRINK 207
>gi|291235462|ref|XP_002737664.1| PREDICTED: NOP2 protein-like [Saccoglossus kowalevskii]
Length = 628
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
L G +Q S + AL PQ+ ERILDMCAAPGGKT+ IASL+++ G + A D + +
Sbjct: 365 LAGHYMMQGASSFLPVMALAPQENERILDMCAAPGGKTSYIASLMKNTGMLFANDANKER 424
Query: 299 VMDIQKLAAEMGL 311
V I MG+
Sbjct: 425 VKSIVGNIHRMGI 437
>gi|406910295|gb|EKD50348.1| hypothetical protein ACD_62C00567G0011 [uncultured bacterium]
Length = 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 10/100 (10%)
Query: 194 YFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVT 253
+F++ + Q + S I + S+ V + R++Q EGEI+LQN S +
Sbjct: 55 FFKKENILFEQDKYLPSCLYIKKLSQKKLVGL--RLYQ--------EGEIYLQNPSSQIP 104
Query: 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
L P+ GER+LD+CA+PG KTT +A+L+ G+++A++
Sbjct: 105 PLVLAPKPGERVLDLCASPGSKTTQMAALMSGRGKIIALE 144
>gi|220906120|ref|YP_002481431.1| sun protein [Cyanothece sp. PCC 7425]
gi|219862731|gb|ACL43070.1| sun protein [Cyanothece sp. PCC 7425]
Length = 443
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I QLP F +G +Q+ + + +H L+PQ GE I+D CAAPGGK+T IA L+ D+G
Sbjct: 224 IEQLPGFA---QGWWSVQDASAQLVSHLLNPQPGEVIIDACAAPGGKSTHIAELIGDKGI 280
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCI 314
V A DR+ +++ +++ + L I
Sbjct: 281 VWACDRTPSRLKKLEQNRQRLKLNSI 306
>gi|421894377|ref|ZP_16324866.1| ribosomal RNA small subunit methyltransferase B [Pediococcus
pentosaceus IE-3]
gi|385272681|emb|CCG90238.1| ribosomal RNA small subunit methyltransferase B [Pediococcus
pentosaceus IE-3]
Length = 444
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 56/95 (58%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
++G++ +Q+ +++ A + +KG+++LD CAAPGGKTT IA+++ + GEV D +
Sbjct: 230 IDGDLTVQDESAMLVAETMHLEKGQKVLDACAAPGGKTTQIAAMIGETGEVTGWDIYQKR 289
Query: 299 VMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
V IQ A M L + T DA+ +ES D
Sbjct: 290 VQLIQDNAQRMHLDNVKTEVQDAIAFREDLDESFD 324
>gi|317133047|ref|YP_004092361.1| sun protein [Ethanoligenens harbinense YUAN-3]
gi|315471026|gb|ADU27630.1| sun protein [Ethanoligenens harbinense YUAN-3]
Length = 436
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
LP+F EG F+Q++ S + ALDPQ GE + D+CAAPGGK+ +A +R +G V A
Sbjct: 227 LPAFT---EGCFFVQDIASQMACAALDPQPGETVYDLCAAPGGKSFTLALHMRGQGMVRA 283
Query: 292 VDRSHNKVMDIQKLAAEMGLKCIT 315
D ++V I++ A +GL I
Sbjct: 284 FDLHAHRVRLIEEGAGWLGLSGIV 307
>gi|433462308|ref|ZP_20419895.1| Sun protein [Halobacillus sp. BAB-2008]
gi|432188996|gb|ELK46138.1| Sun protein [Halobacillus sp. BAB-2008]
Length = 448
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I + P F EG + +Q+ S++ A +D G +LD C+APGGKTT IA + DEGE
Sbjct: 222 ILKHPLFA---EGYVTVQDQSSMLVAEMMDLASGMTVLDACSAPGGKTTHIAEKMADEGE 278
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
++A D K ++K A ++ L IT + D+ K
Sbjct: 279 ILAYDLHEKKAKLVEKKAKQLQLTSITAGQADSRK 313
>gi|397489213|ref|XP_003815627.1| PREDICTED: LOW QUALITY PROTEIN: putative methyltransferase NSUN5
[Pan paniscus]
Length = 468
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEG---IAVDMHNRIFQLPSFYDVLE------GEI 243
YF++ G Y G+ +++ RA +G + + + P+ D+ E G +
Sbjct: 151 YFKKQGFSYQGRASSLDD----LRALKGKHFLLDSLMPELLVFPAQTDLREHPLYRAGHL 206
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
LQ+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 207 ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 266
Query: 304 KLAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 267 TLLARAGVSCCELAEEDFL 285
>gi|260437316|ref|ZP_05791132.1| ribosomal RNA small subunit methyltransferase B [Butyrivibrio
crossotus DSM 2876]
gi|292810228|gb|EFF69433.1| ribosomal RNA small subunit methyltransferase B [Butyrivibrio
crossotus DSM 2876]
Length = 443
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G+ F+Q+L S++ +A++P+K ++D+CAAPGGK+ IA + + G V A D S NKVM
Sbjct: 230 GDFFVQDLSSMMVCYAINPEKDSYVIDLCAAPGGKSLHIAEFMDNTGFVEARDVSDNKVM 289
Query: 301 DIQKLAAEMGLKCITTYKLDA 321
I + + L I DA
Sbjct: 290 MINENIDRLNLCNIKAVVKDA 310
>gi|317052704|ref|YP_004113820.1| RNA methylase, NOL1/NOP2/sun family [Desulfurispirillum indicum S5]
gi|316947788|gb|ADU67264.1| RNA methylase, NOL1/NOP2/sun family [Desulfurispirillum indicum S5]
Length = 316
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG I++QNL S+ L+P+ GE++LD+ AAPGGKT +A+L+ + G + AV+ ++
Sbjct: 90 EGRIYIQNLSSMAPVLLLNPRPGEQVLDLAAAPGGKTLHLAALMENRGWISAVEAVKDRF 149
Query: 300 MDIQKLAAEMGLKCITTYKLD 320
++ G + TY D
Sbjct: 150 FRLKANVEAFGASIVHTYLRD 170
>gi|390934823|ref|YP_006392328.1| sun protein [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389570324|gb|AFK86729.1| sun protein [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 447
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 53/84 (63%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ +++ + AL P G+ I+D+C+APGGKTT I+ L+ +EG+V+A D +K+
Sbjct: 230 DGFVQIQDEGAMIISKALSPNLGDLIIDVCSAPGGKTTHISQLMNNEGKVIAFDIHEHKI 289
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I+ +G+ + Y D+ K
Sbjct: 290 DLIKMNCKRLGVNNVDAYVFDSTK 313
>gi|448307526|ref|ZP_21497421.1| RNA methylase, NOL1/NOP2/sun family protein [Natronorubrum bangense
JCM 10635]
gi|445595698|gb|ELY49802.1| RNA methylase, NOL1/NOP2/sun family protein [Natronorubrum bangense
JCM 10635]
Length = 303
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
SF+ + G+ + +P +V LDPQ GER+ D CAAPGGK T +A+L+ D G VVA D
Sbjct: 75 SFHGLTHGQEEVSAVPPVV----LDPQPGERVWDSCAAPGGKATQLAALMDDRGTVVAND 130
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ ++ ++ A +G + DA
Sbjct: 131 NNLGRISALRFNAERLGATSLAVTNADA 158
>gi|328874823|gb|EGG23188.1| NOL1/NOP2/Sun family protein [Dictyostelium fasciculatum]
Length = 713
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G Q+ S + AL+PQ GERILD+CA+PGGKTT +A+L+++ G +VA D +
Sbjct: 369 EYLAGHYIQQSASSFLPVVALEPQPGERILDLCASPGGKTTYVAALMKNTGTLVANDINE 428
Query: 297 NKVMDIQKLAAEMGLKCITTYKLD 320
++ + +G+K LD
Sbjct: 429 ERMRSLVANIHRLGVKNTIVSNLD 452
>gi|313233299|emb|CBY24414.1| unnamed protein product [Oikopleura dioica]
Length = 306
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 20/184 (10%)
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSV-AVEQPTLDGGWGLGITRG 182
+ +IV A+LRGA ++ PG++ C+ GD+ ++ + P G G
Sbjct: 75 QNIIVDSSGGAALLRGADLFAPGIVTCTETFV-GDIASLWCDSSNDPQSRSGKG---KSK 130
Query: 183 TVLQGSQTD-PYYFERSGLYIGQGTAMMSRAGIF---RASEGIAVDMHNRIFQLP----S 234
+L+G++ F +++G G ++ R+ IF GIAV M+ +F P
Sbjct: 131 FILKGARFPIEECFRDQLVFLGLGKVLIPRSDIFCENPVKSGIAVQMYRPVFDCPPISNH 190
Query: 235 FYDVLEGEIFLQNLPSIVTAHALDPQ-------KGERILDMCAAPGGKTTAIASLLRDEG 287
F + E LQN SI + +LDMCAAPGGKT + + L ++
Sbjct: 191 FLESCSSEAMLQNYASIKICETFAKNLPKAYSSEYRELLDMCAAPGGKTAYLLNRLSNDK 250
Query: 288 EVVA 291
A
Sbjct: 251 WYAA 254
>gi|311029974|ref|ZP_07708064.1| sun protein [Bacillus sp. m3-13]
Length = 275
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ A AL +K + + D CAAPGGKTT IA LL+D G V++ D +KV
Sbjct: 59 GYMTIQDESSMLVARALGVEKDDFVYDCCAAPGGKTTHIAELLKDSGRVISTDLHEHKVK 118
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I+ A + L I LD+ KA
Sbjct: 119 LIKDQAERLQLSNIEAQALDSRKA 142
>gi|325294320|ref|YP_004280834.1| sun protein [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325064768|gb|ADY72775.1| sun protein [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 442
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 50/72 (69%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG ++Q+ S ++A+ LDP++GE ILD+ AAPGGKTTA++SL D+ ++AVD + ++
Sbjct: 229 EGFFYIQDPASFLSAYLLDPKQGEIILDVGAAPGGKTTALSSLTIDKARIIAVDINKERM 288
Query: 300 MDIQKLAAEMGL 311
++ +G+
Sbjct: 289 KLLKNNLKRLGI 300
>gi|156383674|ref|XP_001632958.1| predicted protein [Nematostella vectensis]
gi|156220021|gb|EDO40895.1| predicted protein [Nematostella vectensis]
Length = 415
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G +Q S++ AL PQ+ ER+LDMCAAPGGKTT +A+L+++ G VVA D
Sbjct: 178 EYLAGHYMIQGSSSMLPVMALAPQEKERVLDMCAAPGGKTTYLAALMKNTGIVVANDAKK 237
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R+ V +I +L + C
Sbjct: 238 ERTKALVANIHRLGVTNTVVC 258
>gi|189499780|ref|YP_001959250.1| sun protein [Chlorobium phaeobacteroides BS1]
gi|189495221|gb|ACE03769.1| sun protein [Chlorobium phaeobacteroides BS1]
Length = 447
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +QN + LDP E ILD+C+APGGK T +A L++++G ++AVDR NK
Sbjct: 229 GLVTVQNPTQALPCLLLDPMPDETILDLCSAPGGKATFMAELMKNKGSILAVDRYRNKCE 288
Query: 301 DIQKLAAEMGLKCITT 316
+ + A +G+ I T
Sbjct: 289 KVMRRAQALGISIIET 304
>gi|448525808|ref|XP_003869206.1| Nop2 protein [Candida orthopsilosis Co 90-125]
gi|380353559|emb|CCG23070.1| Nop2 protein [Candida orthopsilosis]
Length = 626
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G+ LQ S + ALDPQ+ ERILDM AAPGGKTT I++L+++ G V A D
Sbjct: 333 EYLAGQYILQAASSFLPVIALDPQENERILDMAAAPGGKTTYISALMKNTGCVFANDANK 392
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R+ + + +I +L + + C
Sbjct: 393 ARTKSLIANIHRLGCKNTIVC 413
>gi|291527116|emb|CBK92702.1| ribosomal RNA small subunit methyltransferase RsmB [Eubacterium
rectale M104/1]
Length = 469
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L SF D G ++Q++ S++ A P+KG+ ++D+CAAPGGK+T IA LL+ G V+A
Sbjct: 257 LQSFRD---GLFYVQDISSMLVAQTAAPKKGDYVIDVCAAPGGKSTHIAELLKGSGHVLA 313
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
D + KV I++ GL ++ DA
Sbjct: 314 RDLTDTKVGMIEENIDRHGLNNMSAEVWDA 343
>gi|336255572|ref|YP_004598679.1| RNA methylase, NOL1/NOP2/sun family [Halopiger xanaduensis SH-6]
gi|335339561|gb|AEH38800.1| RNA methylase, NOL1/NOP2/sun family [Halopiger xanaduensis SH-6]
Length = 302
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
SF+ G+ + +P +V LDP+ GER+ D CAAPGGK T IA+L+ DEG VVA D
Sbjct: 75 SFHGFTHGQEEVSAVPPVV----LDPRPGERVWDCCAAPGGKATQIAALMDDEGTVVAND 130
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ ++ ++ A +G + DA
Sbjct: 131 SNLGRISALRFNAERLGATSLAVTNEDA 158
>gi|440751105|ref|ZP_20930342.1| TRNA and rRNA cytosine-C5-methylase [Mariniradius saccharolyticus
AK6]
gi|436480310|gb|ELP36554.1| TRNA and rRNA cytosine-C5-methylase [Mariniradius saccharolyticus
AK6]
Length = 398
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
IFQ P+F EG +Q+ S A ALD + G R++D CA GGK+ +A+L+ D+G
Sbjct: 187 IFQHPAFK---EGLFEVQDASSQKVATALDAEPGMRVIDACAGAGGKSLHLAALMEDKGR 243
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
V+++D K+ + A G+ I ++ K ++R ES D
Sbjct: 244 VISMDTEAWKLQQTKLRARRNGISIIEPRPIEGTKTIKRLRESAD 288
>gi|324513565|gb|ADY45571.1| Methyltransferase [Ascaris suum]
Length = 438
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 57/92 (61%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L S++ V++G + LQ+ S ++A L P+ G + D+CAAPG KT+ IA+LL G+V A
Sbjct: 202 LHSYWMVVDGYVLLQDKASCLSALLLKPKPGCEVFDVCAAPGMKTSHIAALLSGRGKVWA 261
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
+D+S +V ++ + G+ ++ + D L+
Sbjct: 262 MDKSAERVETLRAMLQNAGVSNVSIFCGDFLR 293
>gi|408673320|ref|YP_006873068.1| Fmu (Sun) domain protein [Emticicia oligotrophica DSM 17448]
gi|387854944|gb|AFK03041.1| Fmu (Sun) domain protein [Emticicia oligotrophica DSM 17448]
Length = 401
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 7/108 (6%)
Query: 232 LPSFYDVLEGEIF------LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD 285
LP +V E+F +Q+ S + A LD Q G R++D CA GGKT +A+L+ +
Sbjct: 190 LPKRANVFSTELFKKGFFEVQDAGSQLIAEYLDVQAGMRVIDACAGAGGKTLHLATLMEN 249
Query: 286 EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
+G ++A+D K+ ++Q+ A G+ + T ++A K ++R+ E+ D
Sbjct: 250 KGRIIAMDVEDYKLQELQRRAKRNGIGNVETRLIEA-KTIKRQRETAD 296
>gi|50425343|ref|XP_461265.1| DEHA2F21054p [Debaryomyces hansenii CBS767]
gi|49656934|emb|CAG89654.1| DEHA2F21054p [Debaryomyces hansenii CBS767]
Length = 611
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G+ LQ S + ALDPQ+ ERILDM AAPGGKTT I++++++ G V A D
Sbjct: 319 EYLAGQYILQAASSFLPVMALDPQENERILDMAAAPGGKTTYISAMMKNTGCVFANDANK 378
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R+ + + +I +L + + C
Sbjct: 379 ARTKSLIANIHRLGCKNTIVC 399
>gi|342218721|ref|ZP_08711327.1| ribosomal RNA small subunit methyltransferase B [Megasphaera sp.
UPII 135-E]
gi|341589097|gb|EGS32463.1| ribosomal RNA small subunit methyltransferase B [Megasphaera sp.
UPII 135-E]
Length = 445
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 8/125 (6%)
Query: 202 IGQGTAMMSRAGI-FR----ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHA 256
I +G ++ +AGI +R E I + I +P EG+ +Q+ S + AH
Sbjct: 191 IVEGMQILDQAGISYRKGKVVPECIYITTSQAIESIPLLR---EGKALIQDEASQLVAHI 247
Query: 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
+DPQ GE I+D CAAPGGKTT +A+L V D +K+ I++ A+ +GL I T
Sbjct: 248 VDPQPGEIIVDACAAPGGKTTHLATLGGKTAIVYGCDIYTHKLKLIEENASRLGLANIRT 307
Query: 317 YKLDA 321
+ DA
Sbjct: 308 IQQDA 312
>gi|328767857|gb|EGF77905.1| hypothetical protein BATDEDRAFT_1711 [Batrachochytrium
dendrobatidis JAM81]
Length = 445
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S + +L PQ ERILDMCAAPGGKTT IA+L+++ G + A D S
Sbjct: 218 EYLAGHYMLQAAASFLPVMSLAPQSNERILDMCAAPGGKTTYIAALMKNTGCLFANDISK 277
Query: 297 NKVMDIQKLAAEMGLK 312
+++ + MG++
Sbjct: 278 DRLKSLNANCHRMGVR 293
>gi|355560554|gb|EHH17240.1| hypothetical protein EGK_13590, partial [Macaca mulatta]
Length = 399
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLE------GEIFLQ 246
YF+R G Y G+ +++ + + + + + P+ D+ E G + LQ
Sbjct: 82 YFKRQGFSYQGRASSLDDLRAL-KGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQ 140
Query: 247 NLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA 306
+ S + A L+P G ++D CAAPG KT+ +A+LL+++G++ A D ++ + L
Sbjct: 141 DRASCLPAMLLNPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 200
Query: 307 AEMGLKCITTYKLDAL 322
A G+ C + D L
Sbjct: 201 ARAGISCCELAEEDFL 216
>gi|255656560|ref|ZP_05401969.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile QCD-23m63]
gi|296449988|ref|ZP_06891752.1| ribosomal RNA small subunit methyltransferase B [Clostridium
difficile NAP08]
gi|296878369|ref|ZP_06902377.1| ribosomal RNA small subunit methyltransferase B [Clostridium
difficile NAP07]
gi|296261258|gb|EFH08089.1| ribosomal RNA small subunit methyltransferase B [Clostridium
difficile NAP08]
gi|296430667|gb|EFH16506.1| ribosomal RNA small subunit methyltransferase B [Clostridium
difficile NAP07]
Length = 441
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 74/137 (54%), Gaps = 11/137 (8%)
Query: 196 ERSGLYIGQGTAMMSRAGIF-RASE-GIA---VDMHNRIFQLPSFYDVLEGEIF------ 244
E+ +YI +SR + + SE GI V M ++ ++ + E+F
Sbjct: 174 EKPSIYIRTNMLKISREELIEKLSEMGIVCLKVPMVEEAIKVEKMKNIEKNELFKAGLFT 233
Query: 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304
+Q++ S++ ++P++ +LD+C+APGGK+T +A+L+ + G+VVA D +K+ I+
Sbjct: 234 IQDISSMIVGKVINPKEDSFVLDVCSAPGGKSTHLATLMNNTGQVVARDIFEHKLKLIKS 293
Query: 305 LAAEMGLKCITTYKLDA 321
+GLK + + DA
Sbjct: 294 TVNRLGLKNVCVERFDA 310
>gi|255550109|ref|XP_002516105.1| williams-beuren syndrome critical region protein, putative [Ricinus
communis]
gi|223544591|gb|EEF46107.1| williams-beuren syndrome critical region protein, putative [Ricinus
communis]
Length = 497
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 224 DMHNRIFQLPSFYD------VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
DM +F LP D VL+G IF+Q S + A ALDP+ G +LD C+APG KT
Sbjct: 200 DMVPNLFVLPPNSDLHNHPLVLDGSIFVQGKASSMVAVALDPKPGWEVLDACSAPGNKTV 259
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQ 303
+A+L+R +G ++A + + +++ ++
Sbjct: 260 HVAALMRGKGRIIACELNKDRIKRLE 285
>gi|373495906|ref|ZP_09586459.1| ribosomal RNA small subunit methyltransferase B [Fusobacterium sp.
12_1B]
gi|371967035|gb|EHO84513.1| ribosomal RNA small subunit methyltransferase B [Fusobacterium sp.
12_1B]
Length = 348
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 55/84 (65%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+I +Q+ S ++A L+P + + +LD C+APGGKT + L+ ++GE++A+D +K+
Sbjct: 135 EGKIIVQDASSYLSAKNLNPSEKDLVLDTCSAPGGKTAVLGELMENKGELLALDIYPHKL 194
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ ++G+ + K+DA K
Sbjct: 195 KLIEENCKKLGIDIVKPVKMDARK 218
>gi|340374457|ref|XP_003385754.1| PREDICTED: putative methyltransferase NSUN5-like [Amphimedon
queenslandica]
Length = 396
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G+I LQ+ S + ++ L P G ++D CAAPG KT+ IA+ +++ G + A DR +
Sbjct: 181 GKIILQDKSSCIASYVLSPPPGASVIDACAAPGSKTSHIAAAMKNTGSIHAFDRDKKRCD 240
Query: 301 DIQKLAAEMGLKCITTYKLDALK 323
++ L + + C+T +D LK
Sbjct: 241 AMKALLRKYNVTCVTVSNMDFLK 263
>gi|383419865|gb|AFH33146.1| putative methyltransferase NSUN5 isoform 1 [Macaca mulatta]
gi|384948132|gb|AFI37671.1| putative methyltransferase NSUN5 isoform 1 [Macaca mulatta]
Length = 466
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEG---IAVDMHNRIFQLPSFYDVLE------GEI 243
YF+R G Y G+ +++ RA +G + + + P+ D+ E G +
Sbjct: 153 YFKRQGFSYQGRASSLDD----LRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHL 208
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
LQ+ S + A L+P G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 209 ILQDRASCLPAMLLNPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 268
Query: 304 KLAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 269 TLLARAGISCCELAEEDFL 287
>gi|78186474|ref|YP_374517.1| Fmu, rRNA SAM-dependent methyltransferase [Chlorobium luteolum DSM
273]
gi|78166376|gb|ABB23474.1| Fmu, rRNA SAM-dependent methyltransferase [Chlorobium luteolum DSM
273]
Length = 442
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +QN + LDPQ ++LD+CAAPGGK A L+ + GE++A+DR K
Sbjct: 226 QGLASVQNPTQALAVLLLDPQPDWKVLDLCAAPGGKAAHAAELMGNRGEIIALDRYPQKT 285
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
+ IQ LA +G+ I DA
Sbjct: 286 LRIQALADTLGISIIEARTGDA 307
>gi|159480252|ref|XP_001698198.1| hypothetical protein CHLREDRAFT_41764 [Chlamydomonas reinhardtii]
gi|158273696|gb|EDO99483.1| predicted protein [Chlamydomonas reinhardtii]
Length = 221
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 243 IFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDI 302
+ LQ+ S + AHAL P G ++D CAAPG KTT +A+++R++G V+A D+ ++ +
Sbjct: 1 VVLQSKASCMPAHALSPAPGWTVVDCCAAPGNKTTHLAAIMRNKGRVIAFDKDPKRLARL 60
Query: 303 QKLAAEMGLKCITTYKLDAL 322
+ A G C+ D L
Sbjct: 61 KANAERTGASCVQARLQDFL 80
>gi|328786980|ref|XP_393743.4| PREDICTED: putative methyltransferase NSUN5-like [Apis mellifera]
Length = 607
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 235 FYD---VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
FYD GEI LQ+ S + ++ L+P+ G +LDMCAAPG KT+ +A++L + G++ A
Sbjct: 201 FYDHPGYQNGEIILQDKASCLPSYLLNPEPGSIVLDMCAAPGMKTSHLAAILTNTGKIYA 260
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322
V++ ++ + K C+ T D+L
Sbjct: 261 VEKDEHRYKTLCKQIKLTNASCVETINKDSL 291
>gi|304437063|ref|ZP_07397026.1| ribosomal RNA small subunit methyltransferase B [Selenomonas sp.
oral taxon 149 str. 67H29BP]
gi|304370014|gb|EFM23676.1| ribosomal RNA small subunit methyltransferase B [Selenomonas sp.
oral taxon 149 str. 67H29BP]
Length = 449
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 206 TAMMSR---AGI-----FRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHAL 257
TA+M R AG+ R EGI + H L + + EG +Q+ S++ A+ L
Sbjct: 199 TALMERLTAAGVRADASLRVPEGILLRTHG---ALDALAPLREGLAQVQDESSMLVAYIL 255
Query: 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTY 317
+ G ++D CAAPGGKTT IA + + G ++A D K+ I + A +G+ I T
Sbjct: 256 GAEPGMTVIDACAAPGGKTTHIAQRMENRGRILAFDIYEEKLGRIMRNAERLGISIIETQ 315
Query: 318 KLDA 321
LDA
Sbjct: 316 LLDA 319
>gi|432329310|ref|YP_007247454.1| NOL1/NOP2/sun family putative RNA methylase [Aciduliprofundum sp.
MAR08-339]
gi|432136019|gb|AGB05288.1| NOL1/NOP2/sun family putative RNA methylase [Aciduliprofundum sp.
MAR08-339]
Length = 303
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G ++Q+L S+ ALDP+K + ILDM AAPG KTT IA ++ +EG +VA D S +++
Sbjct: 85 GYYYVQDLSSMAPVFALDPRKDDVILDMAAAPGSKTTMIAEIMENEGTIVANDISLSRIK 144
Query: 301 DIQKLAAEMGLKCITTYKLDA 321
+ +G+ +LDA
Sbjct: 145 SLGGNLERLGITNTIMTRLDA 165
>gi|380795877|gb|AFE69814.1| putative methyltransferase NSUN5 isoform 1, partial [Macaca
mulatta]
Length = 451
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEG---IAVDMHNRIFQLPSFYDVLE------GEI 243
YF+R G Y G+ +++ RA +G + + + P+ D+ E G +
Sbjct: 138 YFKRQGFSYQGRASSLDD----LRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHL 193
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
LQ+ S + A L+P G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 194 ILQDRASCLPAMLLNPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 253
Query: 304 KLAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 254 TLLARAGISCCELAEEDFL 272
>gi|304404144|ref|ZP_07385806.1| sun protein [Paenibacillus curdlanolyticus YK9]
gi|304347122|gb|EFM12954.1| sun protein [Paenibacillus curdlanolyticus YK9]
Length = 521
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +Q+ S++ A A P G +LD CAAPGGKTT +A L+ +EG V+A D +K
Sbjct: 298 DGRWTIQDESSMLVAQAARPAAGMTVLDCCAAPGGKTTHLAELMGNEGRVIANDVHPHKQ 357
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
I++ A +GL C+ DA
Sbjct: 358 ALIEQQAERLGLTCVEAVTGDA 379
>gi|289580347|ref|YP_003478813.1| RNA methylase [Natrialba magadii ATCC 43099]
gi|448284017|ref|ZP_21475282.1| RNA methylase [Natrialba magadii ATCC 43099]
gi|289529900|gb|ADD04251.1| RNA methylase, NOL1/NOP2/sun family [Natrialba magadii ATCC 43099]
gi|445572112|gb|ELY26654.1| RNA methylase [Natrialba magadii ATCC 43099]
Length = 302
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
SF+ G+ + +P +V LDPQ GER+ D CAAPGGK T IA+L+ D G VVA D
Sbjct: 75 SFHGFTHGQEEVSAVPPVV----LDPQPGERVWDCCAAPGGKATQIAALMDDRGTVVAND 130
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ ++ ++ A +G + DA
Sbjct: 131 NNLGRISALRFNAERLGATSLAVTNDDA 158
>gi|71664344|ref|XP_819153.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70884443|gb|EAN97302.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 561
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 82/194 (42%), Gaps = 43/194 (22%)
Query: 132 CAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTD 191
CAEAVLRG+ V+ PGV++ G V V V ++ + G G R T+L
Sbjct: 131 CAEAVLRGSDVFAPGVVSFVGSFVAGQEVFVGVYLQPASASTSAGGGTDRRTLL------ 184
Query: 192 PYYFERSGLYIGQGTAMMSRAGIFRASE-GIAVDMHNRIFQLPS---FYDVLEGEI---- 243
L +G GTA+M R I R + G+AV + PS +L+ +
Sbjct: 185 --------LCVGAGTALMDRREIIRGRQNGVAVRTNWTPMAQPSKSILSSMLDAAVATLL 236
Query: 244 ----------FLQNLPSIVTAHALDPQKGE---------RILDMCAAPGGKTTAIASLLR 284
FLQN S+V L Q LD CAAPGGK + + SLL
Sbjct: 237 KAGATETSSFFLQNYSSMVAVDVLVQQFSSIDIQREGPLAFLDACAAPGGKASLLLSLLH 296
Query: 285 DEGEVVAVDRSHNK 298
+ +V +D S K
Sbjct: 297 E--KVQGLDSSLGK 308
>gi|336113760|ref|YP_004568527.1| sun protein [Bacillus coagulans 2-6]
gi|335367190|gb|AEH53141.1| sun protein [Bacillus coagulans 2-6]
Length = 447
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ S+ A+AL Q+G+RILD CAAPGGKTT IA L GEV+A+D +K
Sbjct: 230 EGLFTIQDESSMAVAYALCIQEGQRILDACAAPGGKTTHIAEKLEGTGEVIALDLHPHKA 289
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
+++ A +G + +D+ A
Sbjct: 290 KLVRENAERLGTGQVEAVAMDSRDA 314
>gi|305664185|ref|YP_003860473.1| RNA methylase [Ignisphaera aggregans DSM 17230]
gi|304378754|gb|ADM28593.1| RNA methylase, NOL1/NOP2/sun family [Ignisphaera aggregans DSM
17230]
Length = 455
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 230 FQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEV 289
F S Y EG+I +Q+ S + + LDP+ GE ++D+CAAPGGKT + L+ + G +
Sbjct: 236 FDRSSLYR--EGKIVIQDEASALASILLDPKPGEVVIDLCAAPGGKTEHMGELMNNTGII 293
Query: 290 VAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324
A D ++ +Q++ G+ + + DA KA
Sbjct: 294 YAFDIDKTRIKRMQEILNRCGISIVKIFNEDARKA 328
>gi|254478823|ref|ZP_05092189.1| NOL1/NOP2/sun family putative RNA methylase protein
[Carboxydibrachium pacificum DSM 12653]
gi|214035230|gb|EEB75938.1| NOL1/NOP2/sun family putative RNA methylase protein
[Carboxydibrachium pacificum DSM 12653]
Length = 460
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 235 FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDR 294
Y VL G ++Q ++ LDP+ GE+ILD+ AAPGGKTT IAS + DEG +VA +
Sbjct: 78 LYHVL-GLYYIQEPTAMAVVEVLDPKPGEKILDVSAAPGGKTTHIASKIGDEGLIVANEI 136
Query: 295 SHNKVMDIQKLAAEMGLKCIT 315
++ +++ A MG++ I
Sbjct: 137 DRKRIRALEENVARMGIRNIV 157
>gi|156937691|ref|YP_001435487.1| Fmu (Sun) domain-containing protein [Ignicoccus hospitalis KIN4/I]
gi|156566675|gb|ABU82080.1| Fmu (Sun) domain protein [Ignicoccus hospitalis KIN4/I]
Length = 385
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 116/278 (41%), Gaps = 71/278 (25%)
Query: 35 ISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISES 94
+ +AL P C RVN L+ + ++V+++L + G E+
Sbjct: 39 LFEALRTPGKRLCARVNLLRGSPEEVLEELE---------------------RTGYEPET 77
Query: 95 QIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHV 154
P E +V V+ GP + V+ ++ AE+VL GA +Y PG++ V
Sbjct: 78 PYP-YEELVCVRVEGPFEVPLT------DAVVVADKRAAESVLMGADLYAPGLLEAKG-V 129
Query: 155 EKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGI 214
+ G+ V TVL +P F R+ L+ G+
Sbjct: 130 KAGEPV----------------------TVLAEKTLEPVGFGRA-LFEGEP--------- 157
Query: 215 FRASEGIAVDMHNRIFQLPSFYDVL---EGEIFLQNLPSIVTAHALDPQKGERILDMCAA 271
G V+ F+ P F ++ +G I+ Q+ P++ AL+P+ ++DM AA
Sbjct: 158 --PRRGKVVETVVTKFKAPKFRELKSFEKGLIYPQSAPAVAAVRALEPEG--LVVDMNAA 213
Query: 272 PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM 309
PGGK LLR +G+V+A D S + I K+ EM
Sbjct: 214 PGGKAFHAYELLRGKGKVIAFDISKKR---ISKMMEEM 248
>gi|440790310|gb|ELR11593.1| NOL1/NOP2/sun domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 542
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Query: 217 ASEGIAVDMH-NRIFQLPSFYD-------VLEGEIFLQNLPSIVTAHALDPQKGERILDM 268
A+E I VD H + LP V +G + LQ+ S +AHAL P + ++D
Sbjct: 219 AAEEIKVDEHLADLLVLPPTVKMNGRHPLVQDGTLVLQDKASCFSAHALSPPEHAHVIDC 278
Query: 269 CAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
CAAPG KT+ +A+L+++ G++ A D ++ +++L A G IT D LK
Sbjct: 279 CAAPGNKTSHLAALMKNTGKIFAFDMDLYRLNTLKRLTARAGATNITAVCSDFLK 333
>gi|297288127|ref|XP_001110343.2| PREDICTED: putative methyltransferase NSUN5-like isoform 1 [Macaca
mulatta]
Length = 470
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEG---IAVDMHNRIFQLPSFYDVLE------GEI 243
YF+R G Y G+ +++ RA +G + + + P+ D+ E G +
Sbjct: 153 YFKRQGFSYQGRASSLDD----LRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHL 208
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
LQ+ S + A L+P G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 209 ILQDRASCLPAMLLNPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 268
Query: 304 KLAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 269 TLLARAGISCCELAEEDFL 287
>gi|428773859|ref|YP_007165647.1| sun protein [Cyanobacterium stanieri PCC 7202]
gi|428688138|gb|AFZ47998.1| sun protein [Cyanobacterium stanieri PCC 7202]
Length = 464
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +Q+ + + H L P +GE + D CAAPGGKTT IA L+ DEG ++A D +++
Sbjct: 236 DGLFSVQDSSAQLVGHFLAPVRGETVFDACAAPGGKTTHIAELMGDEGTIIACDNISSRL 295
Query: 300 MDIQKLAAEMGLKCITTYKLDA--LKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLH 357
I + +GLK + + D+ + K++ + E +C D I + S LH
Sbjct: 296 EKITENVQRLGLKSVQVREGDSSEWEFCEEKDKCDHEMALC---DRILIDAPCSGLGTLH 352
Query: 358 K 358
K
Sbjct: 353 K 353
>gi|268534138|ref|XP_002632199.1| C. briggsae CBR-NOL-1 protein [Caenorhabditis briggsae]
Length = 664
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G +Q L S++ AL PQ G+R+LDMC+APGGKT+ IA+L+++ G + A D S
Sbjct: 280 EYLAGHYMIQGLNSLLPVMALAPQPGDRVLDMCSAPGGKTSHIAALMKNSGTLFANDASF 339
Query: 297 NKVMDI 302
++ I
Sbjct: 340 DRCRAI 345
>gi|120435407|ref|YP_861093.1| ribosomal RNA small subunit methyltransferase B [Gramella forsetii
KT0803]
gi|117577557|emb|CAL66026.1| ribosomal RNA small subunit methyltransferase B [Gramella forsetii
KT0803]
Length = 403
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Query: 212 AGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAA 271
+G+ E + + +F+ +F D G +Q+ S A LD + G R++D CA
Sbjct: 178 SGVRNYPEALELKERANVFKTKAFQD---GLFEVQDANSQRVAELLDVKPGMRVVDTCAG 234
Query: 272 PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNES 331
GGKT +A+L+ ++G+++A+D NK+ ++++ A G + T +D+ K +++ S
Sbjct: 235 AGGKTLHLAALMENKGQIIALDIYGNKLKELKRRAKRAGAHNVETRSIDSTKVIKKLYNS 294
Query: 332 ND 333
D
Sbjct: 295 AD 296
>gi|20808537|ref|NP_623708.1| tRNA and rRNA cytosine-C5-methylase [Thermoanaerobacter
tengcongensis MB4]
gi|20517161|gb|AAM25312.1| tRNA and rRNA cytosine-C5-methylases [Thermoanaerobacter
tengcongensis MB4]
Length = 460
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 235 FYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDR 294
Y VL G ++Q ++ LDP+ GE+ILD+ AAPGGKTT IAS + DEG +VA +
Sbjct: 78 LYHVL-GLYYIQEPTAMAVVEVLDPKPGEKILDVSAAPGGKTTHIASKIGDEGLIVANEI 136
Query: 295 SHNKVMDIQKLAAEMGLKCIT 315
++ +++ A MG++ I
Sbjct: 137 DRKRIRALEENVARMGIRNIV 157
>gi|302691038|ref|XP_003035198.1| hypothetical protein SCHCODRAFT_84537 [Schizophyllum commune H4-8]
gi|300108894|gb|EFJ00296.1| hypothetical protein SCHCODRAFT_84537 [Schizophyllum commune H4-8]
Length = 422
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S + ALDPQ ER+LDM +APGGKTT IA+LL++ G V A D +
Sbjct: 118 EYLAGHYMLQAASSFLPVIALDPQPHERVLDMASAPGGKTTHIAALLQNTGVVFANDANK 177
Query: 297 NKVMDIQKLAAEMGLKCITTYKLD 320
+ + MG K + D
Sbjct: 178 QRTKSLTANVHRMGCKNVVVCSYD 201
>gi|448330992|ref|ZP_21520266.1| RNA methylase, NOL1/NOP2/sun family protein [Natrinema versiforme
JCM 10478]
gi|445610116|gb|ELY63891.1| RNA methylase, NOL1/NOP2/sun family protein [Natrinema versiforme
JCM 10478]
Length = 302
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 16/115 (13%)
Query: 219 EGIA---VDMHNRIFQLP---------SFYDVLEGEIFLQNLPSIVTAHALDPQKGERIL 266
EGI D ++R+ L SF+ G+ + +P +V LDP+ GER+
Sbjct: 48 EGIGYEQADWNSRVLDLETDSPGSTWTSFHGFTHGQEEVSAVPPVV----LDPEPGERVW 103
Query: 267 DMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
D CAAPGGK T IA+L+ D G VVA D + ++ ++ A +G + DA
Sbjct: 104 DCCAAPGGKATQIAALMDDRGTVVANDNNLGRISALRFNAERLGATSLAVTNADA 158
>gi|194476557|ref|YP_002048736.1| Sun protein (Fmu protein) [Paulinella chromatophora]
gi|171191564|gb|ACB42526.1| Sun protein (Fmu protein) [Paulinella chromatophora]
Length = 451
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 17/121 (14%)
Query: 202 IGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQK 261
+ QG A++ R G + G F+L G +Q+ + + LDP
Sbjct: 230 LSQGIAILGRLGNLQILPG---------FKL--------GHWCIQDRAAQWISPLLDPHP 272
Query: 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
G R+LD+C+APGGK+T IA L+ D GE+ A+D S ++ + A +GL+ I T D
Sbjct: 273 GHRVLDVCSAPGGKSTHIAELMGDVGEIWALDSSKVRLQKVVLNAKRLGLQTIHTLVADG 332
Query: 322 L 322
+
Sbjct: 333 I 333
>gi|308456988|ref|XP_003090900.1| CRE-NOL-1 protein [Caenorhabditis remanei]
gi|308260037|gb|EFP03990.1| CRE-NOL-1 protein [Caenorhabditis remanei]
Length = 677
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
L G +Q L S++ AL PQ G+R+LDMC+APGGKT+ IA+L+++ G + A D S ++
Sbjct: 294 LAGHYMIQGLNSLLPVMALAPQPGDRVLDMCSAPGGKTSHIAALMKNSGTLFANDASFDR 353
Query: 299 ----VMDIQKLAAEMGLKC 313
+ ++ +L + C
Sbjct: 354 CRAIIGNLHRLGVNNAVVC 372
>gi|281412717|ref|YP_003346796.1| sun protein [Thermotoga naphthophila RKU-10]
gi|281373820|gb|ADA67382.1| sun protein [Thermotoga naphthophila RKU-10]
Length = 431
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
G R+LD CAAPGGKTTAIA L++D+G+++AVD S K ++K A + L I T
Sbjct: 238 GLRVLDTCAAPGGKTTAIAELMKDQGKILAVDISREKTQLVEKHAKRLKLSSIET 292
>gi|407474135|ref|YP_006788535.1| ribosomal RNA small subunit methyltransferase B [Clostridium
acidurici 9a]
gi|407050643|gb|AFS78688.1| ribosomal RNA small subunit methyltransferase B [Clostridium
acidurici 9a]
Length = 446
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
+++GI V+ I +L F +G +Q+ S++ + +DP++G ++D+C+APGGKT
Sbjct: 212 STDGIIVENPINITELDEFK---KGLFQIQDESSMLVSQIMDPKEGSLVIDICSAPGGKT 268
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322
T IA + ++G+++A D +K+ +++ + +G+ I + +AL
Sbjct: 269 THIAQKMNNKGKIIARDIYEHKIKLVKENSERLGINIIQYEQFNAL 314
>gi|380796409|gb|AFE70080.1| putative methyltransferase NSUN5 isoform 3, partial [Macaca
mulatta]
Length = 414
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEG---IAVDMHNRIFQLPSFYDVLE------GEI 243
YF+R G Y G+ +++ RA +G + + + P+ D+ E G +
Sbjct: 138 YFKRQGFSYQGRASSLDD----LRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHL 193
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
LQ+ S + A L+P G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 194 ILQDRASCLPAMLLNPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 253
Query: 304 KLAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 254 TLLARAGISCCELAEEDFL 272
>gi|313215201|emb|CBY42870.1| unnamed protein product [Oikopleura dioica]
Length = 448
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSV-AVEQPTLDGGWGLGITRG 182
+ +IV A+LRGA ++ PG++ C+ GD+ ++ + P G G
Sbjct: 89 QNIIVDSSGGAALLRGADLFAPGIVTCTETF-VGDIASLWCDSSNDPQSRSGKG---KSK 144
Query: 183 TVLQGSQTDPYY--FERSGLYIGQGTAMMSRAGIF---RASEGIAVDMHNRIFQLP---- 233
+L+G++ P F +++G G ++ R+ IF GIAV M+ +F P
Sbjct: 145 FILKGARF-PIEEGFRDQLVFLGLGKVLIPRSDIFCENPVKSGIAVQMYRPVFDCPPISN 203
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQ-------KGERILDMCAAPGGKTTAIASLLRDE 286
F + E LQN SI + +LDMCAAPGGKT + + L ++
Sbjct: 204 HFLESCSSEAMLQNYASIKICETFAKNLPKAYSSEYRELLDMCAAPGGKTAYLLNRLSND 263
>gi|303273764|ref|XP_003056234.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462318|gb|EEH59610.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 353
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ + G LQ+ S + AL PQ GER+LDM AAPGGKTT +A+L+R+ G++ A +
Sbjct: 128 EYMAGHYMLQSASSFLPCMALAPQDGERVLDMAAAPGGKTTYVAALMRNTGQIFANEFQK 187
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R + V ++Q++ + C
Sbjct: 188 KRLSSLVANLQRMGCTNAVVC 208
>gi|448323288|ref|ZP_21512751.1| RNA methylase [Natronococcus amylolyticus DSM 10524]
gi|445600099|gb|ELY54118.1| RNA methylase [Natronococcus amylolyticus DSM 10524]
Length = 302
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 207 AMMSRAGIFRASEGIA---VDMHNRIFQLP-----SFYDVLEGEIFLQNLPSIVTAHALD 258
A + RA EG+ VD + R+ +L S + G Q S V A L+
Sbjct: 36 ASVDRATTVLEEEGVGYEGVDWNPRVLRLETDSPGSTWSSFHGFTHGQEEVSAVPATVLE 95
Query: 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318
P+ GER+ D CAAPGGK T +A+L+ D G VVA D + ++ ++ A +G +
Sbjct: 96 PEPGERVWDCCAAPGGKATQLAALMDDRGTVVANDSNLGRISALRFNAERLGATSLAVTN 155
Query: 319 LDA 321
DA
Sbjct: 156 DDA 158
>gi|402863192|ref|XP_003895915.1| PREDICTED: putative methyltransferase NSUN5 [Papio anubis]
Length = 470
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEG---IAVDMHNRIFQLPSFYDVLE------GEI 243
YF+R G Y G+ +++ RA +G + + + P+ D+ E G +
Sbjct: 153 YFKRQGFSYQGRASSLDD----LRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHL 208
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
LQ+ S + A L+P G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 209 ILQDRASCLPAMLLNPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 268
Query: 304 KLAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 269 TLLARAGISCCELAEEDFL 287
>gi|386827119|ref|ZP_10114226.1| tRNA/rRNA cytosine-C5-methylase [Beggiatoa alba B18LD]
gi|386428003|gb|EIJ41831.1| tRNA/rRNA cytosine-C5-methylase [Beggiatoa alba B18LD]
Length = 403
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
A++G+ + +F+ +F D G LQ+ S A AL G R++D CA GGKT
Sbjct: 183 ATDGLILQKRQNLFKTQAFQD---GLFELQDTSSQQVAPALTVSAGMRVIDACAGGGGKT 239
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
+A+L++++G+++A+D K+ ++Q A G I + +D K ++R +S D
Sbjct: 240 LHLAALMQNKGKIIALDVEAWKLKNLQTRAKRAGAHIIESRLIDNRKVIKRLYDSAD 296
>gi|66812796|ref|XP_640577.1| NOL1/NOP2/Sun family protein [Dictyostelium discoideum AX4]
gi|60468601|gb|EAL66604.1| NOL1/NOP2/Sun family protein [Dictyostelium discoideum AX4]
Length = 647
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G+ Q+ S + AL PQ ER+LDMCA+PGGKTT IA+++++ G +VA D +
Sbjct: 334 EYLAGQYIQQSASSFLPVLALAPQPNERVLDMCASPGGKTTYIAAMMKNTGTLVANDVNK 393
Query: 297 NKVMDIQKLAAEMGLKCITTYKLD 320
+++ + +G+K LD
Sbjct: 394 DRIKSLVANIHRLGVKNCMVSNLD 417
>gi|414076371|ref|YP_006995689.1| ribosomal RNA small subunit methyltransferase B [Anabaena sp. 90]
gi|413969787|gb|AFW93876.1| ribosomal RNA small subunit methyltransferase B [Anabaena sp. 90]
Length = 446
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Query: 226 HNRIFQ-LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLR 284
HN Q LP F EG +Q+ + + H LDP G ++D+CAAPGGKTT IA L+
Sbjct: 221 HNGAIQNLPGFN---EGWWTVQDSSAQLVGHLLDPLPGNVVIDVCAAPGGKTTHIAELMG 277
Query: 285 DEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
D+G++ A D++ +++ +++ A + L+ I
Sbjct: 278 DKGKIWACDQTASRLRKLKENAHRLNLQSI 307
>gi|355747584|gb|EHH52081.1| hypothetical protein EGM_12451 [Macaca fascicularis]
Length = 470
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEG---IAVDMHNRIFQLPSFYDVLE------GEI 243
YF+R G Y G+ +++ RA +G + + + P+ D+ E G +
Sbjct: 153 YFKRQGFSYQGRASSLDD----LRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHL 208
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
LQ+ S + A L+P G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 209 ILQDRASCLPAMLLNPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 268
Query: 304 KLAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 269 TLLARAGISCCELAEEDFL 287
>gi|448339368|ref|ZP_21528396.1| RNA methylase, NOL1/NOP2/sun family protein [Natrinema pallidum DSM
3751]
gi|445620597|gb|ELY74093.1| RNA methylase, NOL1/NOP2/sun family protein [Natrinema pallidum DSM
3751]
Length = 302
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
SF+ G+ + +P +V LDPQ G+R+ D CAAPGGK T IA+L+ D G VVA D
Sbjct: 75 SFHGFTHGQEEVSAVPPVV----LDPQPGDRVWDCCAAPGGKATQIAALMDDRGTVVAND 130
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ ++ ++ A +G + DA
Sbjct: 131 NNLGRISALRFNAERLGATSLAVTNADA 158
>gi|414152954|ref|ZP_11409281.1| Sun protein [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411455336|emb|CCO07183.1| Sun protein [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 453
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ S++ AH L+P G R++D+ AAPGGKTT +A L+ D G+++A D +K+
Sbjct: 234 EGLFQVQDESSMLVAHVLNPASGARVIDVAAAPGGKTTHLAQLMGDSGQILAFDLYAHKL 293
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
I +G+ I T DA
Sbjct: 294 DLINDNCRRLGINSIQTKVADA 315
>gi|383419863|gb|AFH33145.1| putative methyltransferase NSUN5 isoform 3 [Macaca mulatta]
gi|384948130|gb|AFI37670.1| putative methyltransferase NSUN5 isoform 3 [Macaca mulatta]
Length = 429
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEG---IAVDMHNRIFQLPSFYDVLE------GEI 243
YF+R G Y G+ +++ RA +G + + + P+ D+ E G +
Sbjct: 153 YFKRQGFSYQGRASSLDD----LRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHL 208
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
LQ+ S + A L+P G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 209 ILQDRASCLPAMLLNPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 268
Query: 304 KLAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 269 TLLARAGISCCELAEEDFL 287
>gi|428178413|gb|EKX47288.1| hypothetical protein GUITHDRAFT_157619 [Guillardia theta CCMP2712]
Length = 367
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 53/85 (62%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G ++Q+ ++++ LDPQ GE ILD+C+APGGK+ IA + D+G+++A D ++
Sbjct: 194 GLFYVQDPSTLLSVKVLDPQPGESILDLCSAPGGKSCYIAQRMEDKGKLIASDIDELRLN 253
Query: 301 DIQKLAAEMGLKCITTYKLDALKAV 325
+++ + +G+ C+ T A+ +
Sbjct: 254 VVRENSERLGITCLETQPASAIDHI 278
>gi|385806067|ref|YP_005842465.1| Proliferating-cell nucleolar antigen p120-like protein
[Fervidicoccus fontis Kam940]
gi|383795930|gb|AFH43013.1| Proliferating-cell nucleolar antigen p120-like protein
[Fervidicoccus fontis Kam940]
Length = 331
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 59/94 (62%)
Query: 230 FQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEV 289
F + S + L G+I++Q + S++ + L P + ++++DM AAPGGKTT +A L++++G +
Sbjct: 98 FSIGSTVEHLSGKIYVQGVGSMLASEVLSPVEDDKVVDMAAAPGGKTTHMAQLMKNKGII 157
Query: 290 VAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
+++D + ++ ++ + K + + DALK
Sbjct: 158 LSIDINRERIWKLRVNIERLNAKNVYVLRTDALK 191
>gi|428315935|ref|YP_007113817.1| sun protein [Oscillatoria nigro-viridis PCC 7112]
gi|428239615|gb|AFZ05401.1| sun protein [Oscillatoria nigro-viridis PCC 7112]
Length = 446
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ + + H L PQ GE I+D CAAPGGKTT A L++D G + A D++ +++
Sbjct: 236 EGWWTIQDSSAQLVTHLLAPQPGETIIDACAAPGGKTTHSAELMQDTGTIYACDKTASRL 295
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
+++ A + +K I + D+
Sbjct: 296 KKLKENADRLQMKSIKIHTGDS 317
>gi|226313315|ref|YP_002773209.1| ribosomal RNA small subunit methyltransferase [Brevibacillus brevis
NBRC 100599]
gi|226096263|dbj|BAH44705.1| probable ribosomal RNA small subunit methyltransferase
[Brevibacillus brevis NBRC 100599]
Length = 448
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ S++ A AL Q G R+LD CAAPGGKTT IA ++ + GE++A D +K
Sbjct: 230 EGYFTIQDESSMLVAPALAAQPGMRVLDACAAPGGKTTHIAEMMENRGEIIASDVHPHKR 289
Query: 300 MDIQKLAAEMGLKCITTYKLDAL 322
I A +G+ I DAL
Sbjct: 290 DLIANAAKRLGITIIQPIVSDAL 312
>gi|154505951|ref|ZP_02042689.1| hypothetical protein RUMGNA_03493 [Ruminococcus gnavus ATCC 29149]
gi|336432654|ref|ZP_08612485.1| ribosomal RNA small subunit methyltransferase B [Lachnospiraceae
bacterium 2_1_58FAA]
gi|153793969|gb|EDN76389.1| ribosomal RNA small subunit methyltransferase B [Ruminococcus
gnavus ATCC 29149]
gi|336017936|gb|EGN47689.1| ribosomal RNA small subunit methyltransferase B [Lachnospiraceae
bacterium 2_1_58FAA]
Length = 448
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 218 SEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
S + ++ + +L SF +GE ++Q++ S++ DP+KG+R++D+CAAPGGK
Sbjct: 214 SYAFWIQDYDHLSELESFQ---KGEFYVQDISSMLVGELADPKKGDRVIDVCAAPGGKAL 270
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+A LR G V A D S KV I + GL I + DA
Sbjct: 271 HVAEKLRGTGSVEARDLSLYKVGLITENIERSGLTNIHAVQKDA 314
>gi|257388869|ref|YP_003178642.1| RNA methylase [Halomicrobium mukohataei DSM 12286]
gi|257171176|gb|ACV48935.1| RNA methylase, NOL1/NOP2/sun family [Halomicrobium mukohataei DSM
12286]
Length = 305
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 219 EGIAV---DMHNRIFQLP-----SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCA 270
EGI V D H + +LP + + G I+ Q S V L P+ GERI D CA
Sbjct: 48 EGITVERTDWHEGLLELPDDQPGANWPYFHGWIYGQEEVSAVPVRVLGPEPGERIWDACA 107
Query: 271 APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
APG KT+ IA+ D+G VVA D + ++ ++ ++G+ + DA
Sbjct: 108 APGSKTSQIAARQGDDGVVVATDSNLGRLSALRTNTEQLGITSVAVTHEDA 158
>gi|168704061|ref|ZP_02736338.1| Fmu, rRNA SAM-dependent methyltransferase:Nop2p [Gemmata
obscuriglobus UQM 2246]
Length = 465
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
+ + H+ I LP + EG+ +Q+ S++ A AL Q G RILD CAAPGGKTT
Sbjct: 250 QALRFSQHHSIRDLPGY---AEGDFAVQDHSSMLVASALGVQPGMRILDACAAPGGKTTH 306
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKL 319
+ L+ G + A D ++ + LA M L I T L
Sbjct: 307 LMELMDGRGHITACDIDPKRLETVAALAQRMRLTGIETVLL 347
>gi|410584639|ref|ZP_11321741.1| ribosomal RNA small subunit methyltransferase RsmB [Thermaerobacter
subterraneus DSM 13965]
gi|410504225|gb|EKP93737.1| ribosomal RNA small subunit methyltransferase RsmB [Thermaerobacter
subterraneus DSM 13965]
Length = 488
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + Q+ S++ H LDP+ G+ +LD+ AAPGGK+T +A + D G VVA D ++
Sbjct: 270 QGALTWQDESSMLAVHVLDPRPGQLVLDVAAAPGGKSTHMAERMGDRGRVVACDVDPGRL 329
Query: 300 MDIQKLAAEMGLKCITTYKLD 320
++ A +GL+ + LD
Sbjct: 330 EKVRAAARRLGLRSVEPLALD 350
>gi|448346480|ref|ZP_21535365.1| RNA methylase, NOL1/NOP2/sun family protein [Natrinema altunense
JCM 12890]
gi|445632683|gb|ELY85894.1| RNA methylase, NOL1/NOP2/sun family protein [Natrinema altunense
JCM 12890]
Length = 302
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
SF+ G+ + +P +V LDPQ G+R+ D CAAPGGK T IA+L+ D G VVA D
Sbjct: 75 SFHGFTHGQEEVSAVPPVV----LDPQPGDRVWDCCAAPGGKATQIAALMDDRGTVVAND 130
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ ++ ++ A +G + DA
Sbjct: 131 NNLGRISALRFNAERLGATSLAVTNADA 158
>gi|384134997|ref|YP_005517711.1| sun protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|339289082|gb|AEJ43192.1| sun protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
Length = 450
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 202 IGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQK 261
+ Q AM A + A +G+ V + +L ++ D G + LQ+ +++ A L +
Sbjct: 202 LAQEGAMAVPAAL--AEDGLRVRGQVDVTRLRAYQD---GYVTLQDEGAMLVAPLLRSEP 256
Query: 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
G R++D+CAAPGGKTT +A L+ D GE+ A D + KV +++ A +GL+ I
Sbjct: 257 GMRVVDLCAAPGGKTTHLAELMGDRGEIDAYDVTVAKVRAVRQQAERLGLRSI 309
>gi|292670256|ref|ZP_06603682.1| RNA methyltransferase Sun [Selenomonas noxia ATCC 43541]
gi|292648208|gb|EFF66180.1| RNA methyltransferase Sun [Selenomonas noxia ATCC 43541]
Length = 448
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
EG+ + H + L + EG +Q+ S++ H L P+ G ++D CAAPGGKTT
Sbjct: 219 EGVILRAHGALNVLAPLH---EGLAQVQDESSMLVTHVLAPEPGMTVIDACAAPGGKTTH 275
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
IA + + G ++A D K+ I++ A +G+ I LDA
Sbjct: 276 IAQRMENCGRILAFDIYEEKIRRIERNAKRLGISIIEAAVLDA 318
>gi|154277144|ref|XP_001539413.1| nucleolar protein NOP2 [Ajellomyces capsulatus NAm1]
gi|150412998|gb|EDN08381.1| nucleolar protein NOP2 [Ajellomyces capsulatus NAm1]
Length = 1980
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S + AL PQ ER+LDM AAPGGKTT I++L+R+ G V+A D S
Sbjct: 1706 EYLAGHYILQAASSFLPVMALAPQPNERVLDMAAAPGGKTTYISALMRNTGCVIANDASK 1765
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDALKAV 325
+ + +G K LDA +A
Sbjct: 1766 PRAKGLIGNIHRLGCKNTIISNLDARQAF 1794
>gi|147678123|ref|YP_001212338.1| tRNA and rRNA cytosine-C5-methylases [Pelotomaculum
thermopropionicum SI]
gi|146274220|dbj|BAF59969.1| tRNA and rRNA cytosine-C5-methylases [Pelotomaculum
thermopropionicum SI]
Length = 456
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
A EG+ +D I L SF EG +Q+ S++ AL P G ++D C+APGGKT
Sbjct: 217 APEGLKIDGFFSIGSLQSFK---EGLFQIQDESSMLAGRALMPAPGAFVIDACSAPGGKT 273
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
T +A L+ + G ++AVD +K++ I++ + +G+ + DA
Sbjct: 274 THLAQLMENRGRILAVDIHPHKLVLIKENCSRLGINIVEGLAGDA 318
>gi|341896868|gb|EGT52803.1| CBN-NOL-1 protein [Caenorhabditis brenneri]
Length = 687
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G +Q L S++ AL PQ G+R+LDMC+APGGKT+ IA+L+++ G + A D S
Sbjct: 306 EYLAGHYMIQGLNSLLPVMALAPQPGDRVLDMCSAPGGKTSHIAALMKNSGTLFANDASF 365
Query: 297 NKVMDI 302
++ I
Sbjct: 366 DRCRAI 371
>gi|302874750|ref|YP_003843383.1| sun protein [Clostridium cellulovorans 743B]
gi|307690635|ref|ZP_07633081.1| sun protein [Clostridium cellulovorans 743B]
gi|302577607|gb|ADL51619.1| sun protein [Clostridium cellulovorans 743B]
Length = 443
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
A E I + I P F ++G I +Q+ +++ A AL+P K + I DMC+APGGKT
Sbjct: 210 APEAIRILKGKSIENNPLF---IKGSITVQDESAMIVASALEPSKDDVIFDMCSAPGGKT 266
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
T IA L D+ ++ A D +K+ I++ +G+ I T DA
Sbjct: 267 THIAELSEDKSKIKAFDIFDHKLKLIEENIKRLGITSIETEIKDA 311
>gi|374324700|ref|YP_005077829.1| ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Paenibacillus
terrae HPL-003]
gi|357203709|gb|AET61606.1| ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Paenibacillus
terrae HPL-003]
Length = 471
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L ++Y +G + +Q+ S++ A A+ P+ +LD CAAPGGKT +A L++D+G ++A
Sbjct: 248 LTTWY--TDGLLSVQDESSMLVAEAVAPEPDMLVLDCCAAPGGKTAHMAELMKDQGRIIA 305
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR 327
D +K IQ+ A +GL + T DAL+ R
Sbjct: 306 NDLHAHKHRLIQEQADRLGLDAVETVTGDALELKNR 341
>gi|329120994|ref|ZP_08249625.1| RNA methyltransferase Sun [Dialister micraerophilus DSM 19965]
gi|327471156|gb|EGF16610.1| RNA methyltransferase Sun [Dialister micraerophilus DSM 19965]
Length = 448
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%)
Query: 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313
A+ALDP+ E++LDMCAAPG KTT IA L+ ++G + A D +K+ I++ +G+K
Sbjct: 252 AYALDPKPYEKVLDMCAAPGSKTTQIAQLMDNKGSIDAWDLYPHKIKLIEENINRLGVKI 311
Query: 314 ITTYKLDALKAV 325
+T DA K +
Sbjct: 312 VTPKLQDATKLL 323
>gi|327283575|ref|XP_003226516.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
[Anolis carolinensis]
Length = 707
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA----V 292
+ L G+ LQ S++ AL PQ+ ERILDMC APGGKT+ IA L+++ G ++A
Sbjct: 362 EYLAGQYMLQGASSLLPVMALAPQENERILDMCCAPGGKTSYIAQLMKNTGVILANDSNA 421
Query: 293 DRSHNKVMDIQKL 305
DR H+ V ++ +L
Sbjct: 422 DRLHSVVGNLHRL 434
>gi|325108338|ref|YP_004269406.1| Fmu (Sun) domain-containing protein [Planctomyces brasiliensis DSM
5305]
gi|324968606|gb|ADY59384.1| Fmu (Sun) domain protein [Planctomyces brasiliensis DSM 5305]
Length = 495
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 26/190 (13%)
Query: 139 GAQVYVPGVMACS-----SHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPY 193
G +PG +A + SH E VV +++ P L GL I R TDP
Sbjct: 187 GLAFSLPGTLAKAWASRYSHDELWPVVWSTLS--PPPL----GLRINR------VATDPQ 234
Query: 194 YFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVT 253
++ + A G E + R+ +P F EGE+ +Q+L ++
Sbjct: 235 E------WLARCEAAGVEIGTTEFPEAFQLLSKTRLHDIPGF---TEGEVVVQDLTAMHA 285
Query: 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313
L+P + +LD+CA PG KTT +A L+ D+G + A D + ++ I + A + C
Sbjct: 286 VRLLNPYPKDDVLDLCAGPGTKTTQMAELMLDQGSITATDVTQARLDQISENAERLSFSC 345
Query: 314 ITTYKLDALK 323
I ++ K
Sbjct: 346 IHPMWIERTK 355
>gi|380016032|ref|XP_003691997.1| PREDICTED: putative methyltransferase NSUN5-like [Apis florea]
Length = 553
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 235 FYD---VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
FYD GEI LQ+ S + ++ L+P+ G +LDMCAAPG KT+ +A+LL + G++ A
Sbjct: 201 FYDHPGYQNGEIILQDKASCLPSYLLNPEPGSIVLDMCAAPGMKTSHLAALLTNTGKIYA 260
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322
V++ ++ + + C+ T D+L
Sbjct: 261 VEKDEHRYKTLCEQIKLTNASCVETINKDSL 291
>gi|297631959|emb|CBM41787.1| hypothetical protein [Simulium squamosum]
Length = 87
Score = 62.4 bits (150), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G +Q S++ LDPQ+ ERILDMCAAPGGK++ IA+L+R+ G + + D
Sbjct: 16 EYLSGYYMIQGASSMLPVMTLDPQENERILDMCAAPGGKSSHIAALMRNTGTLFSNDLKR 75
Query: 297 NKVMDI 302
+++ I
Sbjct: 76 DRIHGI 81
>gi|399889943|ref|ZP_10775820.1| 16S rRNA methyltransferase B [Clostridium arbusti SL206]
Length = 443
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 226 HNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD 285
HN++F EG I +Q+ +++ A ++D ++ ILD+C+APGGKTT I +L +
Sbjct: 224 HNKLFS--------EGFITVQDESAMLVAPSMDIKENMTILDLCSAPGGKTTHICEILSN 275
Query: 286 EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
G V A D NK+ I+K A +G++ + ++D+ K
Sbjct: 276 TGVVRAFDLHANKLKLIEKNAKRLGIENLVCSEMDSRK 313
>gi|71656502|ref|XP_816797.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70881949|gb|EAN94946.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 561
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 84/200 (42%), Gaps = 43/200 (21%)
Query: 126 VIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVL 185
V+V+ CAEAVLRG+ V+ PGV++ G V V + ++ G G R T+L
Sbjct: 125 VVVNVGCAEAVLRGSDVFAPGVVSFVGSFVAGQEVFVGMYLQPAGASTSAGGGTDRRTLL 184
Query: 186 QGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASE-GIAVDMHNRIFQLPS---FYDVLE- 240
L +G GTA+M R I R + G+AV + PS +L+
Sbjct: 185 --------------LCVGAGTALMDRREIIRGRQNGVAVRTNWTPMAQPSKSLLSSMLDE 230
Query: 241 -------------GEIFLQNLPSIVTAHALDPQKGE---------RILDMCAAPGGKTTA 278
FLQN S+V L Q LD CAAPGGK +
Sbjct: 231 AVATLLKAGAPETSSFFLQNYSSMVAVDVLVQQFSSIDIQREGPLAFLDACAAPGGKASL 290
Query: 279 IASLLRDEGEVVAVDRSHNK 298
+ SLL + +V +D S K
Sbjct: 291 LLSLLHE--KVQGLDSSLGK 308
>gi|389852209|ref|YP_006354443.1| nol1-nop2-sun family nucleolar protein IV [Pyrococcus sp. ST04]
gi|388249515|gb|AFK22368.1| nol1-nop2-sun family nucleolar protein IV [Pyrococcus sp. ST04]
Length = 451
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G+I +Q S V + LDP+ GE ++D+ AAPGGKTT +A L+ ++G++ A D ++
Sbjct: 239 KGKIIVQEEASAVASLILDPKPGEIVVDLAAAPGGKTTHMAELMNNKGKIYAFDIDKARM 298
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
+++ A+ MG+K I DA KA
Sbjct: 299 KRLKEFASRMGIKIIKPIIKDARKA 323
>gi|194466505|ref|ZP_03072492.1| sun protein [Lactobacillus reuteri 100-23]
gi|194453541|gb|EDX42438.1| sun protein [Lactobacillus reuteri 100-23]
Length = 449
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 12/130 (9%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKV 299
GEI +Q+ +++ ++ + G+++LD CAAPGGKT IA L DE G V A+D +KV
Sbjct: 234 GEITIQDESAMLAVESMHIEPGDKVLDACAAPGGKTVQIAEALADEDGHVDALDIHQHKV 293
Query: 300 MDIQKLAAEMGL-KCITTYKLDALKAVRRKNESN------DEP----NMCNSKDNNYITS 348
I+K A +G+ K +T + L+A + + ++ N D P + K T
Sbjct: 294 RLIEKNARRLGVEKRVTAHALNAREVDQLFDDENFDKILVDAPCSGIGLLRRKPEIRYTK 353
Query: 349 QTSDSMKLHK 358
SDS +LHK
Sbjct: 354 TLSDSKQLHK 363
>gi|313246455|emb|CBY35362.1| unnamed protein product [Oikopleura dioica]
Length = 300
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 80/188 (42%), Gaps = 28/188 (14%)
Query: 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSV-AVEQPTLDGGWG-----L 177
+ +IV A+LRGA ++ PG++ C+ GD+ ++ + P G G L
Sbjct: 54 QNIIVDSSGGAALLRGADLFAPGIVTCTETF-VGDIASLWCDSSNDPQSRSGKGKSKFIL 112
Query: 178 GITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIF---RASEGIAVDMHNRIFQLP- 233
R + +G F +++G G ++ R+ IF GIAV M+ +F P
Sbjct: 113 KGARFPIEEG-------FRDQLVFLGLGKVLIPRSDIFCENPVKSGIAVQMYRPVFDCPP 165
Query: 234 ---SFYDVLEGEIFLQNLPSIVTAHALDPQ-------KGERILDMCAAPGGKTTAIASLL 283
F + E LQN SI + +LDMCAAPGGKT + + L
Sbjct: 166 ISNHFLENCSSEAMLQNYASIKICETFAKNLPKAYSSEYRELLDMCAAPGGKTAYLLNRL 225
Query: 284 RDEGEVVA 291
++ A
Sbjct: 226 SNDKWYAA 233
>gi|440780883|ref|ZP_20959354.1| 16S rRNA methyltransferase B [Clostridium pasteurianum DSM 525]
gi|440221471|gb|ELP60676.1| 16S rRNA methyltransferase B [Clostridium pasteurianum DSM 525]
Length = 443
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G I +Q+ +++ A +++ ILD+C+APGGKTT I +L + GEV A D NK+
Sbjct: 230 DGFITVQDESAMLVASSMEISNNMTILDLCSAPGGKTTHICEILNNTGEVKAFDLHANKL 289
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I+K A +G+K + ++DA K
Sbjct: 290 RLIKKSAERLGIKNLICSEMDARK 313
>gi|262193849|ref|YP_003265058.1| tRNA (cytosine-5-)-methyltransferase [Haliangium ochraceum DSM
14365]
gi|262077196|gb|ACY13165.1| tRNA (cytosine-5-)-methyltransferase [Haliangium ochraceum DSM
14365]
Length = 499
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 48/90 (53%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G +Q S+V L P+ GERILD+CAAPG KT IA L + G VVA DRS ++
Sbjct: 91 GLYHVQEEASMVPVALLAPEPGERILDLCAAPGNKTAQIALALGNRGTVVANDRSGGRLA 150
Query: 301 DIQKLAAEMGLKCITTYKLDALKAVRRKNE 330
IQ +GL ++ D + R++
Sbjct: 151 AIQNAVTRLGLCNVSMTGCDGTRYPRQRRR 180
>gi|148270410|ref|YP_001244870.1| sun protein [Thermotoga petrophila RKU-1]
gi|147735954|gb|ABQ47294.1| sun protein [Thermotoga petrophila RKU-1]
Length = 431
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT 316
G R+LD CAAPGGKTTAIA L++D+G+++AVD S K ++K A + L I T
Sbjct: 238 GLRVLDTCAAPGGKTTAIAELVKDQGKILAVDISREKTQLVEKHAKRLKLSSIET 292
>gi|403069237|ref|ZP_10910569.1| hypothetical protein ONdio_06550 [Oceanobacillus sp. Ndiop]
Length = 451
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 211 RAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCA 270
R IF + +GI VD N I F EG + +Q+ S++ A LDPQ G +LD C+
Sbjct: 208 RKSIF-SPQGIIVDKGN-ILNTMLFK---EGYVTIQDQSSMLVAEMLDPQPGMHVLDGCS 262
Query: 271 APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
APGGK T IA + +EG + A D KV I AA + L I DA K
Sbjct: 263 APGGKVTHIAEKMENEGVIHAYDLHKKKVKLIDDKAALLHLSIIDAKPGDARK 315
>gi|70606519|ref|YP_255389.1| NOL1/NOP2/sun family protein [Sulfolobus acidocaldarius DSM 639]
gi|68567167|gb|AAY80096.1| NOL1/NOP2/sun family protein [Sulfolobus acidocaldarius DSM 639]
Length = 334
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G ++Q L S+V A+ L+P + + +LDM AAPGGKTT +A L++++G ++A ++S
Sbjct: 111 EYLNGYYYIQGLASMVPAYVLNPHEEDTVLDMAAAPGGKTTQLAQLMKNKGLIIATEKSR 170
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDA 321
+ + M + I + DA
Sbjct: 171 RRARSLISNINRMHARNIILIRSDA 195
>gi|448298241|ref|ZP_21488271.1| RNA methylase [Natronorubrum tibetense GA33]
gi|445591782|gb|ELY45979.1| RNA methylase [Natronorubrum tibetense GA33]
Length = 303
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
SF+ G+ + +P +V LDPQ GER+ D CAAPGGK T IA+L+ D G VVA D
Sbjct: 75 SFHGFTHGQEEVSAVPPVV----LDPQPGERVWDCCAAPGGKATQIAALMDDRGTVVAND 130
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ ++ ++ A +G + DA
Sbjct: 131 NNLGRISALRFNAERLGATSLAVTVDDA 158
>gi|410083445|ref|XP_003959300.1| hypothetical protein KAFR_0J00970 [Kazachstania africana CBS 2517]
gi|372465891|emb|CCF60165.1| hypothetical protein KAFR_0J00970 [Kazachstania africana CBS 2517]
Length = 610
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G+ LQ S + ALDPQ+ ERILDM +APGGKTT I++L+++ G V A D +
Sbjct: 316 EYLAGQYILQAASSFLPVIALDPQENERILDMASAPGGKTTYISALMKNTGCVFANDANK 375
Query: 297 NK----VMDIQKLAAEMGLKC 313
N+ + +I +L + C
Sbjct: 376 NRTKSLIANIHRLGCTNTIVC 396
>gi|253580147|ref|ZP_04857414.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848666|gb|EES76629.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 450
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 226 HNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD 285
+N I L +F ++G+I +Q++ S++ A DPQKG+ ++DMCAAPGGK+ +A + D
Sbjct: 225 YNHILALDAF---IQGKIQVQDVSSMLVAEIADPQKGDYVIDMCAAPGGKSLHVADKMGD 281
Query: 286 EGEVVAVDRSHNKV 299
G V A D S KV
Sbjct: 282 YGTVDARDISQYKV 295
>gi|449066731|ref|YP_007433813.1| NOL1/NOP2/sun family protein [Sulfolobus acidocaldarius N8]
gi|449069005|ref|YP_007436086.1| NOL1/NOP2/sun family protein [Sulfolobus acidocaldarius Ron12/I]
gi|449035239|gb|AGE70665.1| NOL1/NOP2/sun family protein [Sulfolobus acidocaldarius N8]
gi|449037513|gb|AGE72938.1| NOL1/NOP2/sun family protein [Sulfolobus acidocaldarius Ron12/I]
Length = 338
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G ++Q L S+V A+ L+P + + +LDM AAPGGKTT +A L++++G ++A ++S
Sbjct: 115 EYLNGYYYIQGLASMVPAYVLNPHEEDTVLDMAAAPGGKTTQLAQLMKNKGLIIATEKSR 174
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDA 321
+ + M + I + DA
Sbjct: 175 RRARSLISNINRMHARNIILIRSDA 199
>gi|448706048|ref|ZP_21700892.1| RNA methylase, NOL1/NOP2/sun family protein [Halobiforma
nitratireducens JCM 10879]
gi|445794990|gb|EMA45527.1| RNA methylase, NOL1/NOP2/sun family protein [Halobiforma
nitratireducens JCM 10879]
Length = 302
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
SF+ G+ + +P +V LDP+ GER+ D CAAPGGK T +++L+ DEG VVA D
Sbjct: 75 SFHGFTHGQEEVSAVPPVV----LDPEPGERVWDACAAPGGKATQLSALMNDEGTVVAND 130
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ ++ ++ A +G + DA
Sbjct: 131 SNLGRISALRFNAERLGATNLAVTNADA 158
>gi|448079709|ref|XP_004194444.1| Piso0_004938 [Millerozyma farinosa CBS 7064]
gi|359375866|emb|CCE86448.1| Piso0_004938 [Millerozyma farinosa CBS 7064]
Length = 609
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD----R 294
L G LQ S + ALDPQ+ ER+LDM AAPGGKTT I++L+++ G V A D R
Sbjct: 318 LAGHYILQAASSFLPVMALDPQENERVLDMAAAPGGKTTYISALMKNTGCVFANDANKSR 377
Query: 295 SHNKVMDIQKLAAEMGLKC 313
+ + + +I +L + + C
Sbjct: 378 TKSLIANIHRLGCKNTIVC 396
>gi|295397805|ref|ZP_06807870.1| ribosomal RNA small subunit methyltransferase B [Aerococcus
viridans ATCC 11563]
gi|294973940|gb|EFG49702.1| ribosomal RNA small subunit methyltransferase B [Aerococcus
viridans ATCC 11563]
Length = 482
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
+ GEI +Q+ +++ AL+P+ GE +LD CAAPGGKT IA + G V+A D + NK
Sbjct: 260 MNGEITIQDESALLAVEALNPKPGETVLDACAAPGGKTVQIAEAVGRTGHVIACDIAENK 319
Query: 299 VMDIQKLAAEMGL-KCITTYKLDALKAVRRKNESNDEP 335
+ IQ+ M + + DA + R E+ EP
Sbjct: 320 LPLIQENVDRMQVADHVEILHQDATALLDRFGENGSEP 357
>gi|134025020|gb|AAI35007.1| Si:dkey-91i17.1 protein [Danio rerio]
Length = 676
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA----V 292
+ L G LQ S + AL PQ+GE +LDM AAPGGKTT +A L+R+ G +VA V
Sbjct: 358 EYLAGHYMLQGASSFLPVMALSPQEGESVLDMSAAPGGKTTYMAQLMRNTGMIVANDANV 417
Query: 293 DRSHNKVMDIQKLAAEMGLKC 313
DR + V +I +L + C
Sbjct: 418 DRLKSVVGNIHRLGVTNAVIC 438
>gi|389815939|ref|ZP_10207176.1| ribosomal RNA small subunit methyltransferase B [Planococcus
antarcticus DSM 14505]
gi|388465433|gb|EIM07750.1| ribosomal RNA small subunit methyltransferase B [Planococcus
antarcticus DSM 14505]
Length = 450
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G I +Q+ S++ A+AL + G +LDMCAAPGGKTT IA + + G + A+D +KV
Sbjct: 232 KGFITIQDESSMLPAYALQVKPGMTVLDMCAAPGGKTTHIAEKMNNNGTLYALDLHQHKV 291
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRKNE 330
I + A +G I T D ++V R E
Sbjct: 292 KLIDENAVRLGHSVIETIVGDGKQSVERFGE 322
>gi|347522234|ref|YP_004779805.1| rRNA methylase [Lactococcus garvieae ATCC 49156]
gi|385833619|ref|YP_005871394.1| rRNA methylase [Lactococcus garvieae Lg2]
gi|343180802|dbj|BAK59141.1| rRNA methylase [Lactococcus garvieae ATCC 49156]
gi|343182772|dbj|BAK61110.1| rRNA methylase [Lactococcus garvieae Lg2]
Length = 423
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
+EG+I +Q+ S + A LD ERILD CAAPGGKTT IA L D G V A D +K
Sbjct: 210 IEGKITIQDETSQLVAPQLDLTGSERILDACAAPGGKTTHIAQYL-DTGHVTACDLYDHK 268
Query: 299 VMDIQKLAAEMGL-KCITTYKLDALKAVRRKNESND 333
+ I+ A G+ + ITT K DA + R + D
Sbjct: 269 LKLIEDNAERQGVWEKITTVKADATQLAERFADEED 304
>gi|404368281|ref|ZP_10973638.1| ribosomal RNA small subunit methyltransferase B [Fusobacterium
ulcerans ATCC 49185]
gi|313690073|gb|EFS26908.1| ribosomal RNA small subunit methyltransferase B [Fusobacterium
ulcerans ATCC 49185]
Length = 432
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 55/84 (65%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+I +Q+ S ++A L+P + + +LD C+APGGKT + L+ ++GE++A+D +K+
Sbjct: 219 EGKIIVQDASSYLSAKNLNPSEKDLVLDTCSAPGGKTAVLGELMGNKGELLALDIYPHKL 278
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ ++G+ + K+DA K
Sbjct: 279 KLIEENCKKLGIDIVKPVKMDARK 302
>gi|189529666|ref|XP_001922354.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2 [Danio
rerio]
Length = 739
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA----V 292
+ L G LQ S + AL PQ+GE +LDM AAPGGKTT +A L+R+ G +VA V
Sbjct: 358 EYLAGHYMLQGASSFLPVMALSPQEGESVLDMSAAPGGKTTYMAQLMRNTGMIVANDANV 417
Query: 293 DRSHNKVMDIQKLAAEMGLKC 313
DR + V +I +L + C
Sbjct: 418 DRLKSVVGNIHRLGVTNAVIC 438
>gi|448353013|ref|ZP_21541791.1| RNA methylase [Natrialba hulunbeirensis JCM 10989]
gi|445641080|gb|ELY94163.1| RNA methylase [Natrialba hulunbeirensis JCM 10989]
Length = 302
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
SF+ G+ + +P +V LDPQ GER+ D CAAPGGK T +A+L+ D G VVA D
Sbjct: 75 SFHGFTHGQEEVSAVPPVV----LDPQPGERVWDCCAAPGGKATQLAALMDDRGTVVAND 130
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ ++ ++ A +G + DA
Sbjct: 131 NNLGRISALRFNAERLGATSLAVTNDDA 158
>gi|428223826|ref|YP_007107923.1| sun protein [Geitlerinema sp. PCC 7407]
gi|427983727|gb|AFY64871.1| sun protein [Geitlerinema sp. PCC 7407]
Length = 446
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I +LP F EG +Q+ + + + LDP+ GE ++D CAAPGGKTT +A L+ D G
Sbjct: 225 ISELPGFK---EGWWTVQDSSAQLVSQVLDPRPGETVIDACAAPGGKTTHLAELMGDRGT 281
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCI 314
+ A DR +++ + + +GL+ +
Sbjct: 282 IWACDRYPSRLRKVTQNLQRLGLQSV 307
>gi|404329182|ref|ZP_10969630.1| RNA-binding protein Sun [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 448
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ A A+ P+KG +LD CA PGGKTT + +++ G+++A+D +K
Sbjct: 230 GLMTIQDESSMLVADAVAPEKGMTVLDACAGPGGKTTHLGERMQNSGQIIALDLHEHKTK 289
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
I + A +G+ I T +DA +A
Sbjct: 290 LIDQSAKRLGVTNIRTKAMDAREA 313
>gi|119590099|gb|EAW69693.1| hCG39703, isoform CRA_b [Homo sapiens]
Length = 308
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + LQ+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++
Sbjct: 48 GHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLA 107
Query: 301 DIQKLAAEMGLKCITTYKLDAL 322
+ L A G+ C + D L
Sbjct: 108 SMATLLARAGVSCCELAEEDFL 129
>gi|390445339|ref|ZP_10233089.1| Fmu (Sun) domain-containing protein [Nitritalea halalkaliphila LW7]
gi|389662458|gb|EIM74023.1| Fmu (Sun) domain-containing protein [Nitritalea halalkaliphila LW7]
Length = 394
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
+ + ++ IF+ P+F EG +Q+ S + A ALD + G R++D CA GGK
Sbjct: 177 DALVLEQRQNIFKHPAFK---EGAFEIQDASSQLVAAALDVEPGMRVIDACAGAGGKALH 233
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
IA+L++++G V+A+D K+ + A G+ + T +++A K V+R +S D
Sbjct: 234 IAALMQNKGRVLAMDIEGWKLKQAKLRARRGGVSILETREIEA-KTVKRLRDSAD 287
>gi|302035777|ref|YP_003796099.1| ribosomal RNA small subunit methyltransferase B [Candidatus
Nitrospira defluvii]
gi|300603841|emb|CBK40173.1| Ribosomal RNA small subunit methyltransferase B [Candidatus
Nitrospira defluvii]
Length = 449
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 220 GIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
G+ + + LP + EG ++++ + LD Q G+R LD CAAPGGK T +
Sbjct: 209 GLQLSRSCAVIDLPGYA---EGRFYVEDEAGQLIPLLLDVQPGQRALDACAAPGGKATHL 265
Query: 280 ASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCIT 315
A+L+ ++GE+VAVDR +++ + +G+K +T
Sbjct: 266 AALMENQGEIVAVDRVSSRLDLVMANCRRLGVKILT 301
>gi|241958522|ref|XP_002421980.1| RNA m(5)C methyltransferase, putative [Candida dubliniensis CD36]
gi|223645325|emb|CAX39981.1| RNA m(5)C methyltransferase, putative [Candida dubliniensis CD36]
Length = 620
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G+ LQ S + AL+PQ+ ERILDM AAPGGKTT I++L+++ G V A D
Sbjct: 327 EYLAGQYILQAASSFLPVMALEPQENERILDMAAAPGGKTTYISALMKNTGCVFANDANK 386
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R+ + + +I +L + + C
Sbjct: 387 ARTKSLIANIHRLGCKNTIVC 407
>gi|160331223|ref|XP_001712319.1| nop2 [Hemiselmis andersenii]
gi|159765766|gb|ABW97994.1| nop2 [Hemiselmis andersenii]
Length = 366
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ L S + ALDPQKGERIL++ AAPGGK T I+ ++ + G +A D++
Sbjct: 138 EFLAGYFTLQGLSSFFSVIALDPQKGERILEIAAAPGGKATFISQIMENTGICIANDKNK 197
Query: 297 NKVMDIQKLAAEMGLK 312
+++ + +G++
Sbjct: 198 SRLNSLVSTIHRLGIE 213
>gi|433544430|ref|ZP_20500814.1| ribosomal RNA small subunit methyltransferase [Brevibacillus agri
BAB-2500]
gi|432184285|gb|ELK41802.1| ribosomal RNA small subunit methyltransferase [Brevibacillus agri
BAB-2500]
Length = 448
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ S++ A AL + G R+LD CAAPGGKTT IA L+ + G +VA D +K
Sbjct: 230 EGYFTIQDESSMLVAPALAAKPGMRVLDACAAPGGKTTHIAELMENRGHIVACDLHPHKR 289
Query: 300 MDIQKLAAEMGLKCITTYKLDAL 322
I + A +G+ I DAL
Sbjct: 290 DLIAQTAKRLGISIIEPITSDAL 312
>gi|389696115|ref|ZP_10183757.1| ribosomal RNA small subunit methyltransferase RsmB [Microvirga sp.
WSM3557]
gi|388584921|gb|EIM25216.1| ribosomal RNA small subunit methyltransferase RsmB [Microvirga sp.
WSM3557]
Length = 437
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 213 GIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAP 272
G+ + I + I +LP F D GE ++Q+ + + A L Q GERI D+CAAP
Sbjct: 192 GVLLPTGSIRLKERTAIRELPGFED---GEWWVQDAAAALPARLLQAQPGERIADLCAAP 248
Query: 273 GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
GGKT +A+ EV+AVDRS ++ +++ A +GLK T LDA K
Sbjct: 249 GGKTAQLAAA---GAEVLAVDRSAKRLERLEENLARLGLKA-ETRALDAEK 295
>gi|238879878|gb|EEQ43516.1| nucleolar protein NOP2 [Candida albicans WO-1]
Length = 618
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G+ LQ S + AL+PQ+ ERILDM AAPGGKTT I++L+++ G V A D
Sbjct: 325 EYLAGQYILQAASSFLPVMALEPQENERILDMAAAPGGKTTYISALMKNTGCVFANDANK 384
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R+ + + +I +L + + C
Sbjct: 385 ARTKSLIANIHRLGCKNTIVC 405
>gi|448357897|ref|ZP_21546592.1| RNA methylase [Natrialba chahannaoensis JCM 10990]
gi|445648205|gb|ELZ01167.1| RNA methylase [Natrialba chahannaoensis JCM 10990]
Length = 302
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
SF+ G+ + +P +V LDPQ GER+ D CAAPGGK T +A+L+ D G VVA D
Sbjct: 75 SFHGFTHGQEEVSAVPPVV----LDPQPGERVWDCCAAPGGKATQLAALMDDRGTVVAND 130
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ ++ ++ A +G + DA
Sbjct: 131 NNLGRISALRFNAERLGATSLAVTNDDA 158
>gi|68476951|ref|XP_717453.1| hypothetical protein CaO19.8131 [Candida albicans SC5314]
gi|68477142|ref|XP_717364.1| hypothetical protein CaO19.501 [Candida albicans SC5314]
gi|46439073|gb|EAK98395.1| hypothetical protein CaO19.501 [Candida albicans SC5314]
gi|46439166|gb|EAK98487.1| hypothetical protein CaO19.8131 [Candida albicans SC5314]
Length = 618
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G+ LQ S + AL+PQ+ ERILDM AAPGGKTT I++L+++ G V A D
Sbjct: 325 EYLAGQYILQAASSFLPVMALEPQENERILDMAAAPGGKTTYISALMKNTGCVFANDANK 384
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R+ + + +I +L + + C
Sbjct: 385 ARTKSLIANIHRLGCKNTIVC 405
>gi|448084192|ref|XP_004195543.1| Piso0_004938 [Millerozyma farinosa CBS 7064]
gi|359376965|emb|CCE85348.1| Piso0_004938 [Millerozyma farinosa CBS 7064]
Length = 615
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD----R 294
L G LQ S + ALDPQ+ ER+LDM AAPGGKTT I++L+++ G V A D R
Sbjct: 324 LAGHYILQAASSFLPVMALDPQENERVLDMAAAPGGKTTYISALMKNTGCVFANDANKSR 383
Query: 295 SHNKVMDIQKLAAEMGLKC 313
+ + + +I +L + + C
Sbjct: 384 TKSLIANIHRLGCKNTIVC 402
>gi|448414552|ref|ZP_21577621.1| nol1/nop2/sun family RNA methylase [Halosarcina pallida JCM 14848]
gi|445682118|gb|ELZ34542.1| nol1/nop2/sun family RNA methylase [Halosarcina pallida JCM 14848]
Length = 312
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 204 QGTAMMSRAGIFRASEGIAV-DMHNRIFQL---------PSFYDVLEGEIFLQNLPSIVT 253
+ TA +R+ + G V D H I +L P F+ L G+ + LP++
Sbjct: 35 KATAERARSALDAEGVGYEVTDWHPGILKLDERGPGTTWPYFHGWLHGQEEVSALPAL-- 92
Query: 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313
ALDP+ GE + D CAAPG KTT +A L+ D G ++ D + ++ ++ A +G+
Sbjct: 93 --ALDPEPGEVVWDACAAPGSKTTQLADLMDDTGILIGNDNNLGRLSALRHNAERLGVSN 150
Query: 314 ITTYKLDALK-AVRRKNESNDEPNMCNSKDNNYITSQTS 351
+ DA +++ E D+P + D + + S
Sbjct: 151 LVVTNQDARNYSLKPFGEDTDDPQTVGAFDRALVDAPCS 189
>gi|149923973|ref|ZP_01912358.1| Fmu (Sun) domain protein [Plesiocystis pacifica SIR-1]
gi|149815151|gb|EDM74702.1| Fmu (Sun) domain protein [Plesiocystis pacifica SIR-1]
Length = 467
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 212 AGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAA 271
AG +R +EG++ H + L G + +Q S++ A L Q GER+LD+CAA
Sbjct: 59 AGGYRVAEGVSAGHH---------WAYLAGLLHIQEEVSMLPAQLLGVQPGERVLDLCAA 109
Query: 272 PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
PG K+ +A+ L + G V+A DRS ++ +++ +GL + T LDA
Sbjct: 110 PGNKSAQLAAALANAGRVIANDRSMGRMRACRQVLERLGLVNVATTVLDA 159
>gi|399048081|ref|ZP_10739811.1| ribosomal RNA small subunit methyltransferase RsmB [Brevibacillus
sp. CF112]
gi|398053995|gb|EJL46141.1| ribosomal RNA small subunit methyltransferase RsmB [Brevibacillus
sp. CF112]
Length = 448
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ S++ A AL + G R+LD CAAPGGKTT IA L+ + G +VA D +K
Sbjct: 230 EGYFTIQDESSMLVAPALAAKPGMRVLDACAAPGGKTTHIAELMENRGHIVACDLHPHKR 289
Query: 300 MDIQKLAAEMGLKCITTYKLDAL 322
I + A +G+ I DAL
Sbjct: 290 DLIAQTAKRLGISIIEPITSDAL 312
>gi|417940054|ref|ZP_12583342.1| ribosomal RNA small subunit methyltransferase B [Streptococcus
oralis SK313]
gi|343388935|gb|EGV01520.1| ribosomal RNA small subunit methyltransferase B [Streptococcus
oralis SK313]
Length = 437
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG I +Q+ S + A LDPQ E++LD CAAPGGKT IAS L G+V A+D +K+
Sbjct: 224 EGVITIQDESSQLVAPTLDPQGDEQVLDACAAPGGKTAHIASYLT-SGKVTALDLYDHKL 282
Query: 300 MDIQKLAAEMGL-KCITTYKLDALK 323
IQ+ A +G+ + T KLDA K
Sbjct: 283 DLIQENAERLGVADRVQTQKLDARK 307
>gi|15897196|ref|NP_341801.1| proliferating cell nuclear antigen [Sulfolobus solfataricus P2]
gi|284174441|ref|ZP_06388410.1| proliferating cell nuclear antigen [Sulfolobus solfataricus 98/2]
gi|384433709|ref|YP_005643067.1| RNA methylase [Sulfolobus solfataricus 98/2]
gi|13813389|gb|AAK40591.1| Proliferating-cell nucleolar antigen p120 homolog [Sulfolobus
solfataricus P2]
gi|261601863|gb|ACX91466.1| RNA methylase, NOL1/NOP2/sun family [Sulfolobus solfataricus 98/2]
Length = 339
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 56/94 (59%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L S + L G +Q L S+V A+ L+P + +LDM AAPGGKTT ++ +++++G V+A
Sbjct: 110 LGSTLEYLMGYYHIQGLASMVPAYVLNPSYDDFVLDMAAAPGGKTTQLSQIMQNKGLVIA 169
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325
V++ +++ + +G + + K DAL +
Sbjct: 170 VEKKRSRIRALLSNVNRLGAENVVLIKTDALNLI 203
>gi|226290863|gb|EEH46291.1| Nop16-like protein NOP2 [Paracoccidioides brasiliensis Pb18]
Length = 660
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 49/88 (55%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S + AL PQ ERILDM AAPGGKTT I++L+R+ G V+A D S
Sbjct: 350 EYLAGHYILQAASSFLPVMALAPQPNERILDMAAAPGGKTTYISALMRNTGCVLANDASK 409
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDALKA 324
++ + +G K LDA +A
Sbjct: 410 HRAKGLIGNIHRLGCKNTIVSHLDAGEA 437
>gi|441649568|ref|XP_003282123.2| PREDICTED: putative methyltransferase NSUN5-like [Nomascus
leucogenys]
Length = 273
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + LQ+ S + A LDP G ++D CAAPG KT+ +A+LL+++G++ A D ++
Sbjct: 50 GHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLA 109
Query: 301 DIQKLAAEMGLKCITTYKLDAL 322
+ L A G+ C + D L
Sbjct: 110 SMATLLARAGVSCCELAEEDFL 131
>gi|406968986|gb|EKD93724.1| Fmu (Sun) protein [uncultured bacterium]
Length = 308
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + QN S++ ALDPQ GE ILD CAAPGGKT IA ++++G ++A D S ++
Sbjct: 98 QGWFYRQNASSLIPVLALDPQPGEVILDACAAPGGKTVFIAERMKNKGTLIANDLSLSRR 157
Query: 300 MDIQKLAAEMGLKCITT 316
++++ L+ T
Sbjct: 158 QRLKQVLKTYQLEDFAT 174
>gi|429193501|ref|YP_007179179.1| NOL1/NOP2/sun family RNA methylase [Natronobacterium gregoryi SP2]
gi|448323950|ref|ZP_21513393.1| RNA methylase, NOL1/NOP2/sun family protein [Natronobacterium
gregoryi SP2]
gi|429137719|gb|AFZ74730.1| NOL1/NOP2/sun family putative RNA methylase [Natronobacterium
gregoryi SP2]
gi|445619952|gb|ELY73463.1| RNA methylase, NOL1/NOP2/sun family protein [Natronobacterium
gregoryi SP2]
Length = 302
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
SF+ G+ + +P +V LDP+ GER+ D CAAPGGK T +++L+ DEG VVA D
Sbjct: 75 SFHGFTHGQEEVSAVPPVV----LDPEPGERVWDACAAPGGKATQLSALMDDEGTVVAND 130
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ ++ ++ A +G + DA
Sbjct: 131 SNLGRISALRFNAERLGATNLAVTNADA 158
>gi|149239082|ref|XP_001525417.1| nucleolar protein NOP2 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450910|gb|EDK45166.1| nucleolar protein NOP2 [Lodderomyces elongisporus NRRL YB-4239]
Length = 637
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD----R 294
L G+ LQ S + ALDPQ+ ERILDM AAPGGKTT I++++++ G + A D R
Sbjct: 340 LAGQYILQAASSFLPVMALDPQENERILDMAAAPGGKTTYISAMMKNTGCIFANDANKAR 399
Query: 295 SHNKVMDIQKLAAEMGLKC 313
+ + + +I +L + C
Sbjct: 400 TKSLIANIHRLGCRNTIVC 418
>gi|366166732|ref|ZP_09466487.1| 16S rRNA methyltransferase B [Acetivibrio cellulolyticus CD2]
Length = 450
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
++G +Q+ S++ DP+ GE I+D+C+APGGKTT IA L+ + G+++A D +K
Sbjct: 233 VKGFFQVQDESSMMVGRIFDPKPGEFIVDVCSAPGGKTTHIAELMGNRGQIIARDIHEHK 292
Query: 299 VMDIQKLAAEMGLKCITTYKLDA 321
+ I + ++ +G+ I DA
Sbjct: 293 IRLINEASSRLGIDIIKAEIFDA 315
>gi|188588047|ref|YP_001920563.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum E3 str. Alaska E43]
gi|251779411|ref|ZP_04822331.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum E1 str. 'BoNT E Beluga']
gi|188498328|gb|ACD51464.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum E3 str. Alaska E43]
gi|243083726|gb|EES49616.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum E1 str. 'BoNT E Beluga']
Length = 438
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 215 FRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGG 274
F E I + + I + P F D GEI +Q+ +++ A L+ + ++LD+C+APGG
Sbjct: 204 FMCPEAILIKGGSSIQENPLFKD---GEITVQDESAMLVAPLLELENDMKVLDLCSAPGG 260
Query: 275 KTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
KTT IA LL++ GEV A D +K+ I++ +GL + DA K
Sbjct: 261 KTTHIAELLQNTGEVRAFDLHESKLGLIKENCERLGLNNVKIEVGDATK 309
>gi|156121251|ref|NP_001095773.1| putative methyltransferase NSUN5 [Bos taurus]
gi|151556204|gb|AAI49961.1| NSUN5 protein [Bos taurus]
gi|296472990|tpg|DAA15105.1| TPA: NOL1/NOP2/Sun domain family, member 5 [Bos taurus]
Length = 462
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 223 VDMHNR-IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIAS 281
D+HN ++Q G + LQ+ S + A L P G ++D CAAPG KT+ +A+
Sbjct: 195 TDLHNHPLYQ--------AGHLILQDKASCLPAMLLAPPPGSHVIDACAAPGNKTSHLAA 246
Query: 282 LLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322
LL+++G++ A D+ ++ + L A G+ C + D L
Sbjct: 247 LLKNQGKIFAFDQDAKRLASMATLLARAGVSCCELAEQDFL 287
>gi|196230011|ref|ZP_03128874.1| sun protein [Chthoniobacter flavus Ellin428]
gi|196225608|gb|EDY20115.1| sun protein [Chthoniobacter flavus Ellin428]
Length = 410
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 51/84 (60%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G ++Q+ ++++ L PQ GE +LD CAAPGGKTT +A L+ D+G ++A D ++V
Sbjct: 211 GLCYVQDPSTLLSCDLLAPQPGETVLDACAAPGGKTTYLAQLMHDQGRIIACDLYDSRVA 270
Query: 301 DIQKLAAEMGLKCITTYKLDALKA 324
+++ +G+ + D ++A
Sbjct: 271 RLRENLKRLGVTIARAIRHDCMQA 294
>gi|295706330|ref|YP_003599405.1| ribosomal RNA small subunit methyltransferase B [Bacillus
megaterium DSM 319]
gi|294803989|gb|ADF41055.1| ribosomal RNA small subunit methyltransferase B [Bacillus
megaterium DSM 319]
Length = 446
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 25/139 (17%)
Query: 186 QGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFL 245
+G +P +F L + +G A ++A FR EG +
Sbjct: 201 EGIVVEPGHFVEEALEVQKGNAAHTQA--FR-----------------------EGMFTV 235
Query: 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKL 305
Q+ S++ AHAL + E ILD CAAPGGK+T IA LR+ G+V+++D +KV I +
Sbjct: 236 QDESSMLVAHALGAEAEELILDSCAAPGGKSTHIAEQLRNSGKVISLDIHDHKVKLIAQQ 295
Query: 306 AAEMGLKCITTYKLDALKA 324
A + L I D+ KA
Sbjct: 296 AERLHLTNIEPTVQDSRKA 314
>gi|410456987|ref|ZP_11310834.1| 16S rRNA methyltransferase B [Bacillus bataviensis LMG 21833]
gi|409926961|gb|EKN64112.1| 16S rRNA methyltransferase B [Bacillus bataviensis LMG 21833]
Length = 449
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + +Q+ S++ A+AL + E +LD CAAPGGK+T IA L + GEV++VD +KV
Sbjct: 233 GMLTIQDESSMLAAYALGAMENEFVLDACAAPGGKSTHIAEKLENTGEVISVDLHQHKVK 292
Query: 301 DIQKLAAEMGLKCITT 316
I A +GL I T
Sbjct: 293 LINDNARRLGLSNIKT 308
>gi|404450411|ref|ZP_11015394.1| tRNA/rRNA cytosine-C5-methylase [Indibacter alkaliphilus LW1]
gi|403763959|gb|EJZ24877.1| tRNA/rRNA cytosine-C5-methylase [Indibacter alkaliphilus LW1]
Length = 397
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
+ + + IF+ F D G +Q+ S + A ALD + G R++D CA GGK+
Sbjct: 177 DALVLAKRQNIFRTQEFKD---GLFEVQDASSQLVATALDVEPGMRVIDACAGAGGKSLH 233
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
IA+L+ D+G V+++D K+ + + A G+ I T ++ K ++R ES D
Sbjct: 234 IATLMEDKGRVLSMDIEDWKLKNTKLRARRNGISIIETRTIEGNKTIKRLKESAD 288
>gi|387592440|gb|EIJ87464.1| nucleolar protein [Nematocida parisii ERTm3]
gi|387596924|gb|EIJ94544.1| nucleolar protein [Nematocida parisii ERTm1]
Length = 415
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 196 ERSGLYIGQGTAMMSRAGIFR--ASEGIAVD----------MHNRIFQLPSFYDVLEGEI 243
++ L I T RA I + + G+ +D ++N + + + L G
Sbjct: 68 QKRPLTIRVNTLFDKRAAIMKKLVNRGVNIDGIQWNDCSAVVYNSDVPIGATPEYLAGLY 127
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
LQ+ S + ALDPQ+ E I+DMCAAPGGKTT IA+L+ + G + A D S + + +
Sbjct: 128 ILQSPSSSLAVIALDPQENEVIVDMCAAPGGKTTHIAALMNNTGTIYANDVSEERALSLA 187
Query: 304 KLAAEMGL 311
MG+
Sbjct: 188 ANLQRMGV 195
>gi|284161464|ref|YP_003400087.1| Fmu (Sun) domain-containing protein [Archaeoglobus profundus DSM
5631]
gi|284011461|gb|ADB57414.1| Fmu (Sun) domain protein [Archaeoglobus profundus DSM 5631]
Length = 443
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+ +Q+L S +H LDPQ E ILD+ +APG K + IAS++ ++G ++AVD S ++
Sbjct: 228 EGKYVVQDLASCFVSHVLDPQPDEIILDLASAPGLKASHIASMMENKGVIIAVDNSAERL 287
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
++ ++G+K + D K
Sbjct: 288 ERMKAKMKQLGVKNVVCRLADGCK 311
>gi|416110042|ref|ZP_11591841.1| ribosomal RNA small subunit methyltransferase B [Riemerella
anatipestifer RA-YM]
gi|315023501|gb|EFT36507.1| ribosomal RNA small subunit methyltransferase B [Riemerella
anatipestifer RA-YM]
Length = 402
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
E I + +F +F D G +Q+ S AH L+ ++G R++D CA GGKT
Sbjct: 185 EAIELKEKKNVFLTSAFKD---GLFEVQDAGSQKIAHFLEVKEGMRVVDACAGAGGKTLH 241
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
IA+L++++G+++A+D K+ ++++ A G I T ++ K ++R +E D
Sbjct: 242 IAALMKNKGQIIALDIFEWKLAELKRRAKRAGAHNIETRFIEDNKVIKRLHEKAD 296
>gi|149182346|ref|ZP_01860824.1| sun protein [Bacillus sp. SG-1]
gi|148849965|gb|EDL64137.1| sun protein [Bacillus sp. SG-1]
Length = 445
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ H+LD + +LD CAAPGGKTT IA L+ +G+V A+D +K+
Sbjct: 230 DGLLTIQDESSMLVGHSLDVHEDFTVLDSCAAPGGKTTHIAQLMEGKGKVFALDLHKHKI 289
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
I + A+ +GL I + D+ +A
Sbjct: 290 KLINENASRLGLGNIESKAHDSRRA 314
>gi|423335551|ref|ZP_17313326.1| rRNA methylase [Lactobacillus reuteri ATCC 53608]
gi|337728781|emb|CCC03900.1| rRNA methylase [Lactobacillus reuteri ATCC 53608]
Length = 449
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 18/164 (10%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKV 299
GEI +Q+ +++ ++ + G+++LD CAAPGGKT IA L DE G V A+D +KV
Sbjct: 234 GEITIQDESAMLVVESMHIEPGDKVLDACAAPGGKTVQIAEALADEDGHVDALDIHQHKV 293
Query: 300 MDIQKLAAEMGL-KCITTYKLDALKAVRRKNESN------DEP----NMCNSKDNNYITS 348
I+K A +G+ K +T + LDA + + ++ + D P + K T
Sbjct: 294 RLIEKNARRLGVEKRVTAHALDAREVDQLFDDESFNKILVDAPCSGIGLLRRKPEIRYTK 353
Query: 349 QTSDSMKLHKEVPSIAAEGLNGDKSCKEKGR--TCGECGMAQEE 390
+DS +LHK I LN + +KG T C + Q+E
Sbjct: 354 TLNDSKQLHK----IQLAILNAVAAKVKKGGIITYSTCTILQQE 393
>gi|313207277|ref|YP_004046454.1| fmu (sun) domain-containing protein [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|383486592|ref|YP_005395504.1| fmu (sun) domain protein [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|312446593|gb|ADQ82948.1| Fmu (Sun) domain protein [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|380461277|gb|AFD56961.1| fmu (sun) domain protein [Riemerella anatipestifer ATCC 11845 = DSM
15868]
Length = 402
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
E I + +F +F D G +Q+ S AH L+ ++G R++D CA GGKT
Sbjct: 185 EAIELKEKKNVFLTSAFKD---GLFEVQDAGSQKIAHFLEVKEGMRVVDACAGAGGKTLH 241
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
IA+L++++G+++A+D K+ ++++ A G I T ++ K ++R +E D
Sbjct: 242 IAALMKNKGQIIALDIFEWKLAELKRRAKRAGAHNIETRFIEDNKVIKRLHEKAD 296
>gi|435853625|ref|YP_007314944.1| ribosomal RNA small subunit methyltransferase RsmB/transcription
antitermination factor NusB [Halobacteroides halobius
DSM 5150]
gi|433670036|gb|AGB40851.1| ribosomal RNA small subunit methyltransferase RsmB/transcription
antitermination factor NusB [Halobacteroides halobius
DSM 5150]
Length = 445
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G +Q L S++ AH L PQ+ + ++D+C+APGGKTT +A ++ + G++ AV+ KV
Sbjct: 233 GNFIVQGLSSMLVAHLLKPQEDDLVVDLCSAPGGKTTHLAQVMENRGQINAVELHKAKVN 292
Query: 301 DIQKLAAEMGLKCITTY 317
I++ +G+ + Y
Sbjct: 293 LIKENCQRLGINNVEFY 309
>gi|406876046|gb|EKD25732.1| hypothetical protein ACD_79C01534G0001, partial [uncultured
bacterium]
Length = 247
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 53/82 (64%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G ++Q+L S++ L P+KG++ILD+ AAPG KTT +A+++ D GE+VA D S ++
Sbjct: 15 QGCFYIQSLSSMIPPLLLAPKKGDKILDITAAPGSKTTQMAAMMGDSGEIVANDLSQIRL 74
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
+ ++ G+ ++ + DA
Sbjct: 75 LRLKNNLKIQGVTSVSVKQADA 96
>gi|240277116|gb|EER40626.1| nucleolar protein NOP2 [Ajellomyces capsulatus H143]
gi|325096756|gb|EGC50066.1| nucleolar protein NOP2 [Ajellomyces capsulatus H88]
Length = 670
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S + AL PQ ER+LDM AAPGGKTT I++L+R+ G V+A D S
Sbjct: 344 EYLAGHYILQAASSFLPVMALAPQPNERVLDMAAAPGGKTTYISALMRNTGCVLANDASK 403
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDALKAV 325
+ + +G K LDA +A
Sbjct: 404 PRAKGLIGNIHRLGCKNTIISNLDARQAF 432
>gi|121719340|ref|XP_001276369.1| S-adenosylmethionine-dependent methyltransferase superfamily
domain-containing protein [Aspergillus clavatus NRRL 1]
gi|119404567|gb|EAW14943.1| nucleolar RNA methyltransferase (Nop2), putative [Aspergillus
clavatus NRRL 1]
Length = 755
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 46/86 (53%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
L G LQ S + AL PQ ER+LDM AAPGGKTT I++L+R+ G VVA D S +
Sbjct: 360 LAGHYILQAASSFLPVMALAPQPNERVLDMAAAPGGKTTYISALMRNTGCVVANDASKPR 419
Query: 299 VMDIQKLAAEMGLKCITTYKLDALKA 324
+ +G K LDA A
Sbjct: 420 AKGLIGNIHRLGCKNTIVTNLDARTA 445
>gi|402589287|gb|EJW83219.1| hypothetical protein WUBG_05868 [Wuchereria bancrofti]
Length = 434
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 59/101 (58%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L + V G + LQ+ S + L+P+ G I D+CAAPG KTT +A+L++++G++ A
Sbjct: 201 LHQHWMVTSGYLLLQDKASCLPGLVLNPKAGTCIFDICAAPGMKTTHLAALVQNKGKIWA 260
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESN 332
+D++ +++ + + + G ++TY D L+ N+ N
Sbjct: 261 IDKASDRIKTLHAMIEKAGAINVSTYCGDFLRTDVTNNKFN 301
>gi|376261164|ref|YP_005147884.1| ribosomal RNA small subunit methyltransferase RsmB/transcription
antitermination factor NusB [Clostridium sp. BNL1100]
gi|373945158|gb|AEY66079.1| ribosomal RNA small subunit methyltransferase RsmB/transcription
antitermination factor NusB [Clostridium sp. BNL1100]
Length = 449
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
E + + + I L SF +G +Q+ S++ A LDP++GE ++D+C+APGGK T
Sbjct: 215 EAVILKNPSSISNLDSFK---KGYFQVQDESSMLAAKILDPKEGETVIDVCSAPGGKATH 271
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+A L+ ++G V+A D +K+ I++ +G+ I T DA
Sbjct: 272 MAQLMNNKGTVIARDIYQHKLNLIEQSCCRLGIDIIKTEIHDA 314
>gi|256071287|ref|XP_002571972.1| nucleolar protein nol1/nop2 [Schistosoma mansoni]
gi|353229499|emb|CCD75670.1| putative nucleolar protein nol1/nop2 [Schistosoma mansoni]
Length = 479
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L G LQ S++ AL PQ GERILD+CAAPGGKTT IA L+++ G + A
Sbjct: 248 LAGHYILQGASSMLPVMALSPQLGERILDLCAAPGGKTTYIAQLMKNTGTIFA 300
>gi|198431505|ref|XP_002123666.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 693
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 36/57 (63%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
+ L G +Q S V AL PQ GER+LDMCAAPGGKTT IA L+++ G + D
Sbjct: 320 EYLAGHYMIQGASSFVPVMALAPQPGERVLDMCAAPGGKTTYIAQLMKNSGFIFVND 376
>gi|225554205|gb|EEH02543.1| nucleolar protein NOP2 [Ajellomyces capsulatus G186AR]
Length = 704
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S + AL PQ ER+LDM AAPGGKTT I++L+R+ G V+A D S
Sbjct: 343 EYLAGHYILQAASSFLPVMALAPQPNERVLDMAAAPGGKTTYISALMRNTGCVLANDASK 402
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDALKAV 325
+ + +G K LDA +A
Sbjct: 403 PRAKGLIGNIHRLGCKNTIISNLDARQAF 431
>gi|139439007|ref|ZP_01772467.1| Hypothetical protein COLAER_01473 [Collinsella aerofaciens ATCC
25986]
gi|133775718|gb|EBA39538.1| NOL1/NOP2/sun family protein [Collinsella aerofaciens ATCC 25986]
Length = 367
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G+I+LQ+L S++ L Q GE ILDMCAAPGGKTT IA+L + + + A + S +
Sbjct: 125 DGKIYLQSLSSMMPPLVLGAQAGEDILDMCAAPGGKTTQIAALTQSQAHLTACEMSIPRA 184
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
++ G K + ++DA
Sbjct: 185 EKLESNLHRQGAKNVPVMRIDA 206
>gi|256071289|ref|XP_002571973.1| nucleolar protein nol1/nop2 [Schistosoma mansoni]
gi|353229500|emb|CCD75671.1| putative nucleolar protein nol1/nop2 [Schistosoma mansoni]
Length = 490
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L G LQ S++ AL PQ GERILD+CAAPGGKTT IA L+++ G + A
Sbjct: 259 LAGHYILQGASSMLPVMALSPQLGERILDLCAAPGGKTTYIAQLMKNTGTIFA 311
>gi|359457510|ref|ZP_09246073.1| 16S rRNA methyltransferase B [Acaryochloris sp. CCMEE 5410]
Length = 443
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I QLP F EG +Q + + H L+PQ G LD+CAAPGGKTT +A L+ + GE
Sbjct: 225 IPQLPGFQ---EGLWTVQEASAQLVGHLLNPQPGAIALDVCAAPGGKTTHMAELMENRGE 281
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ A DR+ +++ +++ + + + + D+
Sbjct: 282 IWACDRTPSRLRKLKQNLQRLEIDAVQIWTGDS 314
>gi|240147074|ref|ZP_04745675.1| ribosomal RNA small subunit methyltransferase B [Roseburia
intestinalis L1-82]
gi|257200759|gb|EEU99043.1| ribosomal RNA small subunit methyltransferase B [Roseburia
intestinalis L1-82]
Length = 446
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 220 GIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
A+ + + LPSF D G ++Q++ S++ A A P+KG ++D+CAAPGGK+ +
Sbjct: 230 AFAISGFDHLMALPSFQD---GLFYVQDISSMMVAEAAAPEKGAHVIDVCAAPGGKSIHL 286
Query: 280 ASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
A +L G V + D + K I++ + +K +TT DA
Sbjct: 287 AEMLDGTGSVESRDLTGYKTGLIEENISRYQIKNMTTKVWDA 328
>gi|30109258|gb|AAH51209.1| Nsun5 protein, partial [Mus musculus]
Length = 286
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + LQ+ S + A L P G ++D CAAPG KT+ IA+LL+++G++ A D+ ++
Sbjct: 27 GHLILQDKASCLPAMLLSPPPGSHVIDACAAPGNKTSYIAALLKNQGKIFAFDQDAKRLA 86
Query: 301 DIQKLAAEMGLKCITTYKLDAL 322
+ L A G+ C + D L
Sbjct: 87 AMATLVARAGVSCCELAEKDFL 108
>gi|330790279|ref|XP_003283225.1| hypothetical protein DICPUDRAFT_146818 [Dictyostelium purpureum]
gi|325086906|gb|EGC40289.1| hypothetical protein DICPUDRAFT_146818 [Dictyostelium purpureum]
Length = 672
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
L G+ Q+ S + AL PQ ER+LDMCA+PGGKTT IA+++++ G +VA D + +
Sbjct: 336 LAGQYIQQSASSFLPVLALAPQPNERVLDMCASPGGKTTYIAAMMKNTGTLVANDVNKER 395
Query: 299 VMDIQKLAAEMGLKCITTYKLD 320
+ + +G+K +D
Sbjct: 396 IKSLVANIHRLGVKNCVVSNMD 417
>gi|95928560|ref|ZP_01311307.1| sun protein [Desulfuromonas acetoxidans DSM 684]
gi|95135350|gb|EAT17002.1| sun protein [Desulfuromonas acetoxidans DSM 684]
Length = 479
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 217 ASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
A EG+ + + +LP EG +Q+ S++ AH L + G+R+LD CAAPGGKT
Sbjct: 237 APEGVVLPHAGDLQRLPGRE---EGWYQVQDEASMLIAHLLSVEPGQRLLDGCAAPGGKT 293
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
T +A+L + E++A+D ++ +Q+ A +G + I T D
Sbjct: 294 THLAALTDNRSEILALDLHSQRLEILQQGAKRLGCQQIRTLACD 337
>gi|340758953|ref|ZP_08695531.1| ribosomal RNA small subunit methyltransferase B [Fusobacterium
varium ATCC 27725]
gi|251835901|gb|EES64439.1| ribosomal RNA small subunit methyltransferase B [Fusobacterium
varium ATCC 27725]
Length = 432
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 55/84 (65%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G+I +Q+ S ++A L+P + + +LD C+APGGKT + L+ ++GE++A+D +K+
Sbjct: 219 DGKIIVQDASSYLSAKNLNPNEQDLVLDTCSAPGGKTAVLGELMGNKGEILALDIYPHKL 278
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ ++G+ + K+DA K
Sbjct: 279 KLIEENCKKLGIDIVKPIKMDARK 302
>gi|354545845|emb|CCE42574.1| hypothetical protein CPAR2_202170 [Candida parapsilosis]
Length = 629
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G+ LQ S + ALDP++ ERILDM AAPGGKTT I++L+++ G V A D
Sbjct: 336 EYLAGQYILQAASSFLPVIALDPKENERILDMAAAPGGKTTYISALMKNTGCVFANDANK 395
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R+ + + +I +L + + C
Sbjct: 396 ARTKSLIANIHRLGCKNTIVC 416
>gi|323489537|ref|ZP_08094764.1| ribosomal RNA small subunit methyltransferase B [Planococcus
donghaensis MPA1U2]
gi|323396668|gb|EGA89487.1| ribosomal RNA small subunit methyltransferase B [Planococcus
donghaensis MPA1U2]
Length = 450
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G I +Q+ S++ A+AL + G +LDMCAAPGGKTT IA + + G + A+D +KV
Sbjct: 232 KGFITIQDESSMLPAYALQVEPGMTVLDMCAAPGGKTTHIAEKMNNSGTLYALDLHQHKV 291
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRKNE 330
I + A +G I T D ++V R E
Sbjct: 292 KLIDENAERLGHTVIETTVGDGKQSVERFGE 322
>gi|291536615|emb|CBL09727.1| ribosomal RNA small subunit methyltransferase RsmB [Roseburia
intestinalis M50/1]
gi|291541043|emb|CBL14154.1| ribosomal RNA small subunit methyltransferase RsmB [Roseburia
intestinalis XB6B4]
Length = 446
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 220 GIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
A+ + + LPSF D G ++Q++ S++ A A P+KG ++D+CAAPGGK+ +
Sbjct: 230 AFAISGFDHLMALPSFQD---GLFYVQDISSMMVAEAAAPEKGAHVIDVCAAPGGKSIHL 286
Query: 280 ASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
A +L G V + D + K I++ + +K +TT DA
Sbjct: 287 AEMLDGTGSVESRDLTGYKTGLIEENISRYQIKNMTTKVWDA 328
>gi|145512139|ref|XP_001441986.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409258|emb|CAK74589.1| unnamed protein product [Paramecium tetraurelia]
Length = 554
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ+ S + AL PQ ERILDM AAPGGKTT IA L+++ G + A D S
Sbjct: 283 EYLSGHYMLQSASSFLPVLALAPQMNERILDMAAAPGGKTTYIAQLMKNSGVIFANDTSK 342
Query: 297 NKVMDIQKLAAEMGL-KCITT 316
++ + MG+ CI T
Sbjct: 343 DREKALFYNLQRMGVTNCIVT 363
>gi|397905926|ref|ZP_10506759.1| Ribosomal RNA small subunit methyltransferase B [Caloramator
australicus RC3]
gi|397161029|emb|CCJ34094.1| Ribosomal RNA small subunit methyltransferase B [Caloramator
australicus RC3]
Length = 314
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 42/52 (80%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
EG+I+LQNL S++ LDP++GE++LD+ AAPG KTT +A+++++ G ++A
Sbjct: 94 EGQIYLQNLSSMIPPIILDPKEGEKVLDVAAAPGSKTTQMAAMMKNMGFILA 145
>gi|60416136|gb|AAH90742.1| Si:dkey-91i17.1 protein [Danio rerio]
Length = 658
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA----V 292
+ L G LQ S + AL PQ+GE +LDM AAPGGKTT +A L+R+ G +VA V
Sbjct: 353 EYLAGHYMLQGASSFLPVMALSPQEGESMLDMSAAPGGKTTYMAQLMRNTGMIVANDANV 412
Query: 293 DRSHNKVMDIQKLAAEMGLKC 313
DR + V +I +L + C
Sbjct: 413 DRLKSVVGNIHRLGVTNAVIC 433
>gi|442315483|ref|YP_007356786.1| hypothetical protein G148_1788 [Riemerella anatipestifer RA-CH-2]
gi|441484406|gb|AGC41092.1| hypothetical protein G148_1788 [Riemerella anatipestifer RA-CH-2]
Length = 420
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
E I + +F +F D G +Q+ S AH L+ ++G R++D CA GGKT
Sbjct: 203 EAIELKEKKNVFLTSAFKD---GLFEVQDAGSQKIAHFLEVKEGMRVVDACAGAGGKTLH 259
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
IA+L++++G+++A+D K+ ++++ A G I T ++ K ++R +E D
Sbjct: 260 IAALMKNKGQIIALDIFEWKLAELKRRAKRAGAHNIETRFIEDNKVIKRLHEKAD 314
>gi|400596163|gb|EJP63947.1| NOL1/NOP2/sun family protein [Beauveria bassiana ARSEF 2860]
Length = 631
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G LQ S + AL PQ GER+LDM AAPGGKTT A+++++ G VVA D
Sbjct: 320 EYLAGHYILQAASSFLPVMALSPQPGERVLDMAAAPGGKTTHCAAMMKNTGVVVANDPNK 379
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R+ + +I +L A+ + C
Sbjct: 380 ARAKGLIGNIHRLGAKNVIVC 400
>gi|218245524|ref|YP_002370895.1| sun protein [Cyanothece sp. PCC 8801]
gi|218166002|gb|ACK64739.1| sun protein [Cyanothece sp. PCC 8801]
Length = 451
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I LP F EG +Q+ + + +H LDPQ E I+D CAAPGGKTT IA L+ D+G
Sbjct: 231 IQDLPGFK---EGWWTVQDSSAQLVSHLLDPQPSEVIIDACAAPGGKTTHIAELMGDQGT 287
Query: 289 VVAVDRSHNKVMDIQKLAA 307
+ A DR ++ ++KL+A
Sbjct: 288 IWACDRYASR---LKKLSA 303
>gi|300797713|ref|NP_001178522.1| NOP2/Sun domain family, member 5 [Rattus norvegicus]
gi|149063048|gb|EDM13371.1| NOL1/NOP2/Sun domain family, member 5 (predicted) [Rattus
norvegicus]
Length = 451
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + LQ+ S + A L P G ++D CAAPG KT+ IA+LL+++G++ A D+ ++
Sbjct: 204 GHLILQDKASCLPAMLLSPPPGSHVIDACAAPGNKTSYIAALLKNQGKIFAFDQDAKRLA 263
Query: 301 DIQKLAAEMGLKCITTYKLDAL 322
+ L A G+ C + D L
Sbjct: 264 AMATLLARAGVSCCEVAEKDFL 285
>gi|407450826|ref|YP_006722550.1| hypothetical protein B739_0041 [Riemerella anatipestifer RA-CH-1]
gi|403311809|gb|AFR34650.1| hypothetical protein B739_0041 [Riemerella anatipestifer RA-CH-1]
Length = 420
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
E I + +F +F D G +Q+ S AH L+ ++G R++D CA GGKT
Sbjct: 203 EAIELKEKKNVFLTSAFKD---GLFEVQDAGSQKIAHFLEVKEGMRVVDACAGAGGKTLH 259
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
IA+L++++G+++A+D K+ ++++ A G I T ++ K ++R +E D
Sbjct: 260 IAALMKNKGQIIALDIFEWKLAELKRRAKRAGAHNIETRFIEDNKVIKRLHEKAD 314
>gi|334118913|ref|ZP_08493001.1| sun protein [Microcoleus vaginatus FGP-2]
gi|333459143|gb|EGK87758.1| sun protein [Microcoleus vaginatus FGP-2]
Length = 449
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ + + H L Q GE I+D CAAPGGKTT A L++DEG + A D++ +++
Sbjct: 236 EGWWTIQDSSAQLVTHILGAQPGETIIDACAAPGGKTTHSAELMQDEGTIYACDKTASRL 295
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
+++ A + +K I + D+
Sbjct: 296 KKLKENADRLQMKSIKIHTGDS 317
>gi|310778567|ref|YP_003966900.1| sun protein [Ilyobacter polytropus DSM 2926]
gi|309747890|gb|ADO82552.1| sun protein [Ilyobacter polytropus DSM 2926]
Length = 434
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+I +Q+ S + A L + G+ +LD C+APG K +A L+ ++GE+ A+D +K+
Sbjct: 220 EGKITVQDGSSYLAAKMLGARPGDIVLDTCSAPGSKAVVLAELMENKGEITALDIHQHKI 279
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
+ A +G K IT KLDA K
Sbjct: 280 KLLDANAKNLGAKIITGVKLDARK 303
>gi|257058561|ref|YP_003136449.1| sun protein [Cyanothece sp. PCC 8802]
gi|256588727|gb|ACU99613.1| sun protein [Cyanothece sp. PCC 8802]
Length = 451
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I LP F EG +Q+ + + +H LDPQ E I+D CAAPGGKTT IA L+ D+G
Sbjct: 231 IQDLPGFK---EGWWTVQDSSAQLVSHLLDPQPSEVIIDACAAPGGKTTHIAELMGDQGT 287
Query: 289 VVAVDRSHNKVMDIQKLAA 307
+ A DR ++ ++KL+A
Sbjct: 288 IWACDRYASR---LKKLSA 303
>gi|418008220|ref|ZP_12648088.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei UW4]
gi|410547164|gb|EKQ21402.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei UW4]
Length = 446
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLL--RDEGEVVAVDRSH 296
++GE +Q+ S++ A +LD Q G+ +LD CAAPGGKTT IA L + G+V A+D
Sbjct: 228 VKGEYTMQDESSMLVAPSLDIQPGDAVLDACAAPGGKTTHIAQYLDPKQGGQVTALDLHA 287
Query: 297 NKVMDIQKLAAEMGL 311
NKV I K A +GL
Sbjct: 288 NKVRLINKNAKRLGL 302
>gi|254576911|ref|XP_002494442.1| ZYRO0A01562p [Zygosaccharomyces rouxii]
gi|238937331|emb|CAR25509.1| ZYRO0A01562p [Zygosaccharomyces rouxii]
Length = 617
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G LQ S + ALDPQ+ ERILDM AAPGGKTT I++L+++ G V A D
Sbjct: 322 EYLAGNYILQAASSFLPVIALDPQENERILDMAAAPGGKTTYISALMKNTGCVFANDANK 381
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R+ + V +I +L + C
Sbjct: 382 SRTKSLVANIHRLGCTNTIVC 402
>gi|449669945|ref|XP_002159649.2| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
[Hydra magnipapillata]
Length = 715
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
L G +Q S++ AL PQ+ ERILDMC+APGGKTT I SL+++ G +VA D
Sbjct: 318 LAGHYMIQGASSMLPVIALSPQENERILDMCSAPGGKTTYIGSLMKNTGVIVAND 372
>gi|424843171|ref|ZP_18267796.1| tRNA/rRNA cytosine-C5-methylase [Saprospira grandis DSM 2844]
gi|395321369|gb|EJF54290.1| tRNA/rRNA cytosine-C5-methylase [Saprospira grandis DSM 2844]
Length = 405
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 226 HNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD 285
NR F Y+ G +Q+ S AH L PQ G ++D CA GGK+ +A+L+++
Sbjct: 191 QNRKFTHLKSYEA--GWFEVQDYASQQLAHFLKPQAGRYLVDACAGAGGKSLHLAALMKN 248
Query: 286 EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
GE++++D S K+ +++K A G+ I T K+ A
Sbjct: 249 RGEILSMDLSEYKLKELRKRAKRAGVSIIKTEKIPA 284
>gi|238926271|ref|ZP_04658031.1| rRNA SAM-dependent methyltransferase RmsB [Selenomonas flueggei
ATCC 43531]
gi|238885951|gb|EEQ49589.1| rRNA SAM-dependent methyltransferase RmsB [Selenomonas flueggei
ATCC 43531]
Length = 449
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 215 FRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGG 274
R E + + H L + + EG +Q+ S++ AH L + G ++D CAAPGG
Sbjct: 216 LRVPESVLLHAHG---ALDALAPLREGLAQVQDESSMLVAHVLGAEPGMTVIDACAAPGG 272
Query: 275 KTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
KTT IA + + G + A D K+ I + A +G+ I T LDA
Sbjct: 273 KTTHIAQRMENRGRIWAFDIHEEKLRRIMRNAERLGISIIETQLLDA 319
>gi|74140144|dbj|BAE33793.1| unnamed protein product [Mus musculus]
Length = 465
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + LQ+ S + A L P G ++D CAAPG KT+ IA+LL+++G++ A D+ ++
Sbjct: 206 GHLILQDKASCLPAMLLSPPPGSHVIDACAAPGNKTSYIAALLKNQGKIFAFDQDAKRLA 265
Query: 301 DIQKLAAEMGLKCITTYKLDAL 322
+ L A G+ C + D L
Sbjct: 266 AMATLVARAGVSCCELAEKDFL 287
>gi|154146245|ref|NP_663389.2| putative methyltransferase NSUN5 [Mus musculus]
gi|118573086|sp|Q8K4F6.2|NSUN5_MOUSE RecName: Full=Putative methyltransferase NSUN5; AltName:
Full=NOL1/NOP2/Sun domain family member 5; AltName:
Full=Williams-Beuren syndrome chromosomal region 20A
protein homolog
gi|26347971|dbj|BAC37634.1| unnamed protein product [Mus musculus]
gi|74146333|dbj|BAE28935.1| unnamed protein product [Mus musculus]
gi|148687420|gb|EDL19367.1| NOL1/NOP2/Sun domain family, member 5 [Mus musculus]
gi|183396899|gb|AAI65967.1| NOL1/NOP2/Sun domain family, member 5 [synthetic construct]
Length = 465
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + LQ+ S + A L P G ++D CAAPG KT+ IA+LL+++G++ A D+ ++
Sbjct: 206 GHLILQDKASCLPAMLLSPPPGSHVIDACAAPGNKTSYIAALLKNQGKIFAFDQDAKRLA 265
Query: 301 DIQKLAAEMGLKCITTYKLDAL 322
+ L A G+ C + D L
Sbjct: 266 AMATLVARAGVSCCELAEKDFL 287
>gi|403217478|emb|CCK71972.1| hypothetical protein KNAG_0I01870 [Kazachstania naganishii CBS
8797]
Length = 629
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S + ALDPQ+ ERILDM AAPGGKTT I++++++ G V A D +
Sbjct: 333 EYLAGHYILQAASSFLPVIALDPQENERILDMAAAPGGKTTYISAMMKNTGCVFANDANK 392
Query: 297 NK----VMDIQKLAAEMGLKC 313
N+ + +I +L + C
Sbjct: 393 NRTKSLIANIHRLGCTNTIVC 413
>gi|421873665|ref|ZP_16305277.1| ribosomal RNA small subunit methyltransferase B [Brevibacillus
laterosporus GI-9]
gi|372457452|emb|CCF14826.1| ribosomal RNA small subunit methyltransferase B [Brevibacillus
laterosporus GI-9]
Length = 436
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ S++ A AL R+LD CAAPGGKTT IA L+ ++GE++A D +K
Sbjct: 217 EGFCTIQDESSMLVAPALHLTPNLRVLDACAAPGGKTTHIAELMGNQGEILACDVHPHKR 276
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR 327
I++ A +G+ ITT DA + R
Sbjct: 277 ELIEQNAKRLGITIITTMVADAADLLDR 304
>gi|363750754|ref|XP_003645594.1| hypothetical protein Ecym_3284 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889228|gb|AET38777.1| Hypothetical protein Ecym_3284 [Eremothecium cymbalariae
DBVPG#7215]
Length = 606
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G LQ S + ALDPQ+ ERILDM AAPGGKTT I++L+++ G V A D
Sbjct: 310 EYLAGHYILQAASSFLPVIALDPQENERILDMAAAPGGKTTYISALMKNTGCVFANDANK 369
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R+ + + +I +L + C
Sbjct: 370 ARTKSLIANIHRLGCTNTIVC 390
>gi|225569232|ref|ZP_03778257.1| hypothetical protein CLOHYLEM_05314 [Clostridium hylemonae DSM
15053]
gi|225162031|gb|EEG74650.1| hypothetical protein CLOHYLEM_05314 [Clostridium hylemonae DSM
15053]
Length = 434
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 226 HNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD 285
+N + L SF G ++Q++ S+ T H P+KG+ ++D+CAAPGGK +A L
Sbjct: 222 YNYLGGLESF---RRGYYYVQDINSMRTVHWAAPRKGDTVIDVCAAPGGKALHMAERLHG 278
Query: 286 EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333
G V A D + KV I++ GLK I K DA R ES D
Sbjct: 279 TGHVEARDLTGYKVRLIEENIERSGLKNIEAVKWDATVPDRSAAESAD 326
>gi|21552756|gb|AAM62311.1|AF412029_1 Williams-Beuren syndrome critical region protein 20 [Mus musculus]
Length = 465
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + LQ+ S + A L P G ++D CAAPG KT+ IA+LL+++G++ A D+ ++
Sbjct: 206 GHLILQDKASCLPAMLLSPPPGSHVIDACAAPGNKTSYIAALLKNQGKIFAFDQDAKRLA 265
Query: 301 DIQKLAAEMGLKCITTYKLDAL 322
+ L A G+ C + D L
Sbjct: 266 AMATLVARAGVSCCELAEKDFL 287
>gi|417788134|ref|ZP_12435817.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
salivarius NIAS840]
gi|417810422|ref|ZP_12457101.1| 16S rRNA m(5)C methyltransferase [Lactobacillus salivarius GJ-24]
gi|418961222|ref|ZP_13513109.1| 16S rRNA m(5)C 967 methyltransferase [Lactobacillus salivarius
SMXD51]
gi|334308311|gb|EGL99297.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
salivarius NIAS840]
gi|335349218|gb|EGM50718.1| 16S rRNA m(5)C methyltransferase [Lactobacillus salivarius GJ-24]
gi|380344889|gb|EIA33235.1| 16S rRNA m(5)C 967 methyltransferase [Lactobacillus salivarius
SMXD51]
Length = 445
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIA-SLLRDEGEVV 290
LP + G++ +Q+ +++ ++D Q+ + +LD CAAPGGKTT IA L+ EG+V
Sbjct: 222 LPKSSEFRNGKMIIQDESAMLAVESMDIQEDDIVLDACAAPGGKTTQIAEKLMTGEGKVW 281
Query: 291 AVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAV 325
A+D +KV I++ A ++GL ++ +LDA KA+
Sbjct: 282 ALDIHKHKVKLIEENANKLGLISKVSAKQLDARKAI 317
>gi|293374996|ref|ZP_06621291.1| ribosomal RNA small subunit methyltransferase B [Turicibacter
sanguinis PC909]
gi|325843368|ref|ZP_08167951.1| ribosomal RNA small subunit methyltransferase B [Turicibacter sp.
HGF1]
gi|292646406|gb|EFF64421.1| ribosomal RNA small subunit methyltransferase B [Turicibacter
sanguinis PC909]
gi|325489397|gb|EGC91770.1| ribosomal RNA small subunit methyltransferase B [Turicibacter sp.
HGF1]
Length = 444
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G ++Q+ S++ A AL P+ ++LD C+APGGKTT +A ++R G V A D +K+
Sbjct: 226 QGWFYVQDESSMLVARALKPKHHTKVLDTCSAPGGKTTHVAEMMRQTGMVYAHDIYPHKI 285
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I+ +GLK + DA K
Sbjct: 286 KLIEDNVKRLGLKNVVVNLQDATK 309
>gi|156842997|ref|XP_001644568.1| hypothetical protein Kpol_1003p15 [Vanderwaltozyma polyspora DSM
70294]
gi|156115214|gb|EDO16710.1| hypothetical protein Kpol_1003p15 [Vanderwaltozyma polyspora DSM
70294]
Length = 633
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G+ LQ S + ALDPQ+ ER+LDM AAPGGKTT I++L+++ G V A D
Sbjct: 336 EYLAGQYILQAASSFLPVVALDPQENERVLDMAAAPGGKTTYISALMKNTGCVFANDANK 395
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R+ + + +I +L + C
Sbjct: 396 ARTKSLIANIHRLGCTNTIVC 416
>gi|417989898|ref|ZP_12630395.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei A2-362]
gi|417999358|ref|ZP_12639568.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei T71499]
gi|410536893|gb|EKQ11479.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei A2-362]
gi|410539378|gb|EKQ13911.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei T71499]
Length = 446
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLL--RDEGEVVAVDRSH 296
++GE +Q+ S++ A +LD Q G+ +LD CAAPGGKTT IA L + G+V A+D
Sbjct: 228 VKGEYTMQDESSMLVAPSLDIQPGDAVLDACAAPGGKTTHIAQYLDPKQGGQVTALDLHA 287
Query: 297 NKVMDIQKLAAEMGL 311
NKV I K A +GL
Sbjct: 288 NKVRLINKNAKRLGL 302
>gi|408789792|ref|ZP_11201435.1| tRNA and rRNA cytosine-C5-methylase [Lactobacillus florum 2F]
gi|408520941|gb|EKK20955.1| tRNA and rRNA cytosine-C5-methylase [Lactobacillus florum 2F]
Length = 447
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 11/101 (10%)
Query: 211 RAGIFRASEGIAVDMHNRIFQLPSFY---------DVLEGEIFLQNLPSIVTAHALDPQK 261
R + + +D+ + I +P+ Y + G ++ Q ++ A ++PQ
Sbjct: 35 RINPLKPPANLTIDLSHPIPTVPNGYYGKVAGKTPEHQSGYVYSQEPSAMQVAQVVNPQA 94
Query: 262 GERILDMCAAPGGKTTAIASLLRDEGEVVA--VDRSHNKVM 300
GER+LD+CAAPGGK+T +A +L + G +VA +DRS KV+
Sbjct: 95 GERVLDLCAAPGGKSTQLAGMLNNSGLLVANEIDRSRAKVL 135
>gi|420143339|ref|ZP_14650840.1| rRNA methylase [Lactococcus garvieae IPLA 31405]
gi|391856858|gb|EIT67394.1| rRNA methylase [Lactococcus garvieae IPLA 31405]
Length = 423
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
+EG+I +Q+ S + A LD ER+LD CAAPGGKTT IA L D G V A D +K
Sbjct: 210 IEGKITIQDETSQLVAPQLDLTGSERVLDACAAPGGKTTHIAQYL-DTGHVTACDLYDHK 268
Query: 299 VMDIQKLAAEMGL-KCITTYKLDALKAVRRKNESND 333
+ I+ A G+ + ITT K DA + R + D
Sbjct: 269 LKLIEDNAERQGVWEKITTVKADATQLAERFADEED 304
>gi|418011058|ref|ZP_12650826.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei Lc-10]
gi|410553050|gb|EKQ27060.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei Lc-10]
Length = 446
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLL--RDEGEVVAVDRSH 296
++GE +Q+ S++ A +LD Q G+ +LD CAAPGGKTT IA L + G+V A+D
Sbjct: 228 VKGEYTMQDESSMLVAPSLDIQPGDAVLDACAAPGGKTTHIAQYLDPKQGGQVTALDLHA 287
Query: 297 NKVMDIQKLAAEMGL 311
NKV I K A +GL
Sbjct: 288 NKVRLINKNAKRLGL 302
>gi|354477569|ref|XP_003500992.1| PREDICTED: putative methyltransferase NSUN5 [Cricetulus griseus]
Length = 415
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + LQ+ S + A L P G ++D CAAPG KT+ IA+LL+++G++ A D+ ++
Sbjct: 156 GHLILQDKASCLPAMLLSPPPGSHVIDACAAPGNKTSYIAALLKNQGKIFAFDQDAKRLA 215
Query: 301 DIQKLAAEMGLKCITTYKLDAL 322
+ L A G+ C + D L
Sbjct: 216 AMATLLARAGVSCCELAEKDFL 237
>gi|220928955|ref|YP_002505864.1| sun protein [Clostridium cellulolyticum H10]
gi|219999283|gb|ACL75884.1| sun protein [Clostridium cellulolyticum H10]
Length = 449
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 229 IFQLPSFYDVLE----GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLR 284
I + PS LE G +Q+ S++ A LDP++GE ++D+C+APGGK T +A L+
Sbjct: 218 ILKSPSSITNLEVFKNGYFQVQDESSMLAAKILDPKEGETVIDVCSAPGGKATHMAQLMN 277
Query: 285 DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
++G ++A D +K+ I++ +G+ I T DA
Sbjct: 278 NKGTIIARDVYQHKLKLIEQSCCRLGIDIIKTEIHDA 314
>gi|405952994|gb|EKC20735.1| Putative methyltransferase NSUN5 [Crassostrea gigas]
Length = 599
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 235 FYD---VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
F+D V +G + LQ+ S + AH L P +G ++D CAAPG KT+ +ASL+ ++G + A
Sbjct: 204 FHDSRLVQDGRVILQDKASCLPAHILSPPEGAVVVDSCAAPGNKTSHMASLMGNKGTIYA 263
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323
D +++ +Q+ G+ C +D L+
Sbjct: 264 FDHKEDRIEVLQERMEGAGVSCKVARCMDFLR 295
>gi|334134798|ref|ZP_08508300.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus sp.
HGF7]
gi|333607642|gb|EGL18954.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus sp.
HGF7]
Length = 489
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 220 GIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
GI V + P F +G+ +Q+ S++ A AL P+ G +LD CAAPGGKT I
Sbjct: 254 GIVVSSGGNMALTPGFG---QGDYSIQDESSMLVAEALRPEAGMTVLDCCAAPGGKTAHI 310
Query: 280 ASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
A + D G V A D +K I + A +GLK + T DA
Sbjct: 311 AEKMDDTGTVWACDLHPHKKRLIDEQAQRLGLKSVHTLVKDA 352
>gi|397772673|ref|YP_006540219.1| RNA methylase, NOL1/NOP2/sun family [Natrinema sp. J7-2]
gi|397681766|gb|AFO56143.1| RNA methylase, NOL1/NOP2/sun family [Natrinema sp. J7-2]
Length = 302
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD 293
SF+ G+ + +P IV L+PQ G+R+ D CAAPGGK T IA+L+ D G VVA D
Sbjct: 75 SFHGFTHGQEEVSAVPPIV----LEPQPGDRVWDCCAAPGGKATQIAALMDDRGTVVAND 130
Query: 294 RSHNKVMDIQKLAAEMGLKCITTYKLDA 321
+ ++ ++ A +G + DA
Sbjct: 131 NNLGRISALRFNAERLGATSLAVTNADA 158
>gi|342320777|gb|EGU12716.1| Nucleolar protein NOP2 [Rhodotorula glutinis ATCC 204091]
Length = 749
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S + ALDPQ ER LDM AAPGGKTT +++L+ + GEV A D S
Sbjct: 441 EYLAGHYILQAASSFLPVMALDPQPHERCLDMSAAPGGKTTYMSALMGNTGEVWANDSSR 500
Query: 297 NKVMDIQKLAAEMGLKCITTYKLD 320
++ + A +G + + +D
Sbjct: 501 GRIKGLGGNVARLGCRNVVITNVD 524
>gi|256071291|ref|XP_002571974.1| nucleolar protein nol1/nop2 [Schistosoma mansoni]
gi|353229498|emb|CCD75669.1| putative nucleolar protein nol1/nop2 [Schistosoma mansoni]
Length = 434
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
L G LQ S++ AL PQ GERILD+CAAPGGKTT IA L+++ G + A
Sbjct: 248 LAGHYILQGASSMLPVMALSPQLGERILDLCAAPGGKTTYIAQLMKNTGTIFA 300
>gi|14591177|ref|NP_143253.1| proliferating-cell nucleolar protein p120 [Pyrococcus horikoshii
OT3]
gi|3257797|dbj|BAA30480.1| 315aa long hypothetical proliferating-cell nucleolar protein p120
[Pyrococcus horikoshii OT3]
Length = 315
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%)
Query: 230 FQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEV 289
F + S + L G I++Q S+ ALDP+ GE + DM AAPGGKT+ +A L+R++G +
Sbjct: 87 FSITSTPEFLTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVI 146
Query: 290 VAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322
A D N++ + + + +G+ + + +L
Sbjct: 147 YAFDVDENRLRETRLNLSRLGVLNVILFHSSSL 179
>gi|256544908|ref|ZP_05472279.1| sun protein [Anaerococcus vaginalis ATCC 51170]
gi|256399407|gb|EEU13013.1| sun protein [Anaerococcus vaginalis ATCC 51170]
Length = 426
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +Q+ SI L+P+K ILD+CAAPG KT+ IA L + +++A D S NK+
Sbjct: 224 KGFFTIQSEASIKVCEILNPKKNSNILDICAAPGTKTSFIAELCENSSKIIANDISFNKL 283
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
I + +GLK I DA
Sbjct: 284 SKINENIKRLGLKNIEITNFDA 305
>gi|374597460|ref|ZP_09670464.1| Fmu (Sun) domain protein [Gillisia limnaea DSM 15749]
gi|373872099|gb|EHQ04097.1| Fmu (Sun) domain protein [Gillisia limnaea DSM 15749]
Length = 405
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
+ + ++ +F+ +F +G +Q+ S + AH L+ + G R++D CA GGKT
Sbjct: 185 DALQLEERTNVFKTEAFK---KGYFEVQDANSQLVAHFLEVEPGMRVVDTCAGAGGKTLH 241
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR 327
IA+++ ++G+++A D NK+ ++++ A G+ I +D K V++
Sbjct: 242 IAAIMENKGQIIATDIYENKLKELKRRAKRAGVHNIDPRAIDTTKVVKK 290
>gi|448314911|ref|ZP_21504566.1| RNA methylase, NOL1/NOP2/sun family protein [Natronococcus jeotgali
DSM 18795]
gi|445612718|gb|ELY66437.1| RNA methylase, NOL1/NOP2/sun family protein [Natronococcus jeotgali
DSM 18795]
Length = 302
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 207 AMMSRAGIFRASEGIA---VDMHNRIFQLP-----SFYDVLEGEIFLQNLPSIVTAHALD 258
A + RA +EG+ D + R+ +L S + G Q S V A L+
Sbjct: 36 ATVDRATAALEAEGVGYERADWNPRVLRLETDSPGSTWSSFHGFTHGQEEVSAVPATVLE 95
Query: 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318
P+ GER+ D CAAPGGK T +A+L+ D G VVA D + ++ ++ A +G +
Sbjct: 96 PEPGERVWDSCAAPGGKATQLAALMDDRGTVVANDSNLGRISALRFNAERLGATSLAVTN 155
Query: 319 LDA 321
DA
Sbjct: 156 DDA 158
>gi|373857268|ref|ZP_09600010.1| sun protein [Bacillus sp. 1NLA3E]
gi|372452918|gb|EHP26387.1| sun protein [Bacillus sp. 1NLA3E]
Length = 449
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +Q+ S++ A+AL +R+LD CAAPGGK+T IA L G VV++D +KV
Sbjct: 232 DGLFTIQDESSMLVAYALGISLNDRVLDACAAPGGKSTHIAERLDHTGAVVSLDLHEHKV 291
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I + A +GL I T LD+ K
Sbjct: 292 KLISESAKRLGLNNIETKALDSRK 315
>gi|339009262|ref|ZP_08641834.1| ribosomal RNA small subunit methyltransferase B [Brevibacillus
laterosporus LMG 15441]
gi|338773740|gb|EGP33271.1| ribosomal RNA small subunit methyltransferase B [Brevibacillus
laterosporus LMG 15441]
Length = 453
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG +Q+ S++ A AL R+LD CAAPGGKTT +A L+ ++GE++A D +K
Sbjct: 234 EGFCTIQDESSMLVAPALHLTPNLRVLDACAAPGGKTTHMAELMGNQGEILACDVHPHKR 293
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRR 327
I++ A +G+ ITT DA V R
Sbjct: 294 ELIEQNAKRLGITIITTMVADAADLVDR 321
>gi|449447153|ref|XP_004141333.1| PREDICTED: putative methyltransferase NSUN5-like [Cucumis sativus]
gi|449529369|ref|XP_004171672.1| PREDICTED: putative methyltransferase NSUN5-like [Cucumis sativus]
Length = 509
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 224 DMHNRIFQLPSFYD------VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTT 277
DM + + LP D V +G IFLQ S + A ALDP+ G +LD C+APG KT
Sbjct: 199 DMVSDLLILPPGSDLHDHPLVADGSIFLQGKASSMVAVALDPKPGWEVLDACSAPGNKTV 258
Query: 278 AIASLLRDEGEVVAVDRSHNKVMDIQ 303
+ASL+ +G V+A + + N+V ++
Sbjct: 259 HLASLMHGKGRVIACELNENRVKRLR 284
>gi|189347315|ref|YP_001943844.1| sun protein [Chlorobium limicola DSM 245]
gi|189341462|gb|ACD90865.1| sun protein [Chlorobium limicola DSM 245]
Length = 451
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%)
Query: 238 VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297
+ +G + +QN + DPQ G +LD+CAAPGGK+T L+++ G + AVD
Sbjct: 233 IKQGLLTVQNPTQGLACLLCDPQPGSTLLDLCAAPGGKSTFCGELMQNTGNITAVDLYSQ 292
Query: 298 KVMDIQKLAAEMGLKCITTYKLDA 321
K+ + + A E+G+ I+T + DA
Sbjct: 293 KLQKLSEHAGELGITIISTAEADA 316
>gi|448362080|ref|ZP_21550693.1| RNA methylase [Natrialba asiatica DSM 12278]
gi|445649760|gb|ELZ02697.1| RNA methylase [Natrialba asiatica DSM 12278]
Length = 302
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 207 AMMSRAGIFRASEGIA---VDMHNRIFQLP---------SFYDVLEGEIFLQNLPSIVTA 254
A + RA +G+A D + R+ +L SF+ G+ + +P IV
Sbjct: 36 ASVERATTALDEDGVAYDQADWNPRVLRLETNSPGSTWTSFHGFTHGQEEVSAVPPIV-- 93
Query: 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314
LDP+ G+R+ D CAAPGGK T IA+L+ D G VVA D + ++ ++ A +G +
Sbjct: 94 --LDPRPGDRVWDCCAAPGGKATQIAALMDDRGTVVANDSNLGRISALRFNAERLGATSL 151
Query: 315 TTYKLDA 321
DA
Sbjct: 152 AVTNDDA 158
>gi|289192431|ref|YP_003458372.1| RNA methylase, NOL1/NOP2/sun family [Methanocaldococcus sp.
FS406-22]
gi|288938881|gb|ADC69636.1| RNA methylase, NOL1/NOP2/sun family [Methanocaldococcus sp.
FS406-22]
Length = 266
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 52/82 (63%)
Query: 230 FQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEV 289
F + S + L G Q++ S++ L+P++ ILDMCAAPGGKTT +A L++++G +
Sbjct: 43 FSIGSTPEYLFGYYMPQSISSMIPPVVLNPEENSFILDMCAAPGGKTTHLAQLMKNKGTI 102
Query: 290 VAVDRSHNKVMDIQKLAAEMGL 311
VAV+ S ++V ++ MG+
Sbjct: 103 VAVEISRSRVKALKSNINRMGV 124
>gi|67902172|ref|XP_681342.1| hypothetical protein AN8073.2 [Aspergillus nidulans FGSC A4]
gi|40740505|gb|EAA59695.1| hypothetical protein AN8073.2 [Aspergillus nidulans FGSC A4]
gi|259480830|tpe|CBF73828.1| TPA: nucleolar RNA methyltransferase (Nop2), putative
(AFU_orthologue; AFUA_5G01760) [Aspergillus nidulans
FGSC A4]
Length = 788
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S + AL PQ+ ERILDM +APGGKTT I++L+R+ G V+A D S
Sbjct: 365 EYLAGHYILQAASSFLPVMALAPQENERILDMASAPGGKTTYISALMRNTGCVIANDASK 424
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDALKA 324
+ + +G K LDA A
Sbjct: 425 PRAKGLIGNIHRLGCKNTIVTNLDARTA 452
>gi|113474586|ref|YP_720647.1| sun protein [Trichodesmium erythraeum IMS101]
gi|110165634|gb|ABG50174.1| sun protein [Trichodesmium erythraeum IMS101]
Length = 443
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 228 RIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEG 287
+I +LP + EG +Q+ + + + L+PQ GE I+D CAAPGGKTT I L+ D G
Sbjct: 222 QIQKLPGYN---EGWWSIQDSSAQLVCYLLNPQPGEIIIDACAAPGGKTTHIGELMGDNG 278
Query: 288 EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
++ A+D + +++ ++ + LK I+ + D+
Sbjct: 279 KIFAIDMTASRLKKLESNTERLQLKSISISRGDS 312
>gi|365985658|ref|XP_003669661.1| hypothetical protein NDAI_0D01050 [Naumovozyma dairenensis CBS 421]
gi|343768430|emb|CCD24418.1| hypothetical protein NDAI_0D01050 [Naumovozyma dairenensis CBS 421]
Length = 625
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S + ALDP + ERILDM AAPGGKTT I++L+++ G V A D +
Sbjct: 328 EYLAGNYILQAASSFLPVIALDPHENERILDMAAAPGGKTTYISALMKNTGTVFANDANK 387
Query: 297 NK----VMDIQKLAAEMGLKC 313
N+ + +I +L + C
Sbjct: 388 NRTKSLIANIHRLGCTNTIVC 408
>gi|456012702|gb|EMF46390.1| Ribosomal RNA small subunit methyltransferase B [Planococcus
halocryophilus Or1]
Length = 403
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G I +Q+ S++ A+AL + G +LDMCAAPGGKTT IA +++ G + A+D +KV
Sbjct: 185 KGFITIQDESSMLPAYALQVEPGMTVLDMCAAPGGKTTHIAEKMKNSGTLYALDLHQHKV 244
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAVRRKNESN 332
I + A +G I + D ++V R E
Sbjct: 245 KLIDENAERLGHTVIESTVGDGKQSVERFGEEK 277
>gi|429765805|ref|ZP_19298085.1| ribosomal RNA small subunit methyltransferase B [Clostridium
celatum DSM 1785]
gi|429185658|gb|EKY26632.1| ribosomal RNA small subunit methyltransferase B [Clostridium
celatum DSM 1785]
Length = 438
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG I +Q+ +++ A LD +G+ +LD+C+APGGKTT A LL G+V A D NK+
Sbjct: 226 EGYITVQDESAMLVAPLLDINEGDVVLDLCSAPGGKTTHAAELLEGTGKVYAFDLHENKL 285
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I + +GL + +DA K
Sbjct: 286 SLITENVERLGLNNVEVDAMDATK 309
>gi|50546513|ref|XP_500726.1| YALI0B10560p [Yarrowia lipolytica]
gi|49646592|emb|CAG82971.1| YALI0B10560p [Yarrowia lipolytica CLIB122]
Length = 609
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G LQ S + A+DPQ+GER+LDM A+PGGKTT I++L+++ G V A D S ++
Sbjct: 310 GHYILQAASSFLPVMAMDPQEGERVLDMAASPGGKTTYISALMKNTGMVFANDVSKPRIK 369
Query: 301 DIQKLAAEMGLKCITTYKLDA 321
+ +G K DA
Sbjct: 370 SLIANIHRLGCKNTVVCNYDA 390
>gi|50365012|ref|YP_053437.1| tRNA and rRNA cytosine-C5-methylase [Mesoplasma florum L1]
gi|50363568|gb|AAT75553.1| tRNA and rRNA cytosine-C5-methylases [Mesoplasma florum L1]
Length = 425
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G+I +Q+ SI+ + L+P KG ++LDMC+APGGK T ++ ++ + G+V + S NK+
Sbjct: 229 GQITIQDPASILVGNVLNPTKGSKVLDMCSAPGGKLTHLSMIMENTGQVTGFEISENKIK 288
Query: 301 ----DIQKL-AAEMGLKC 313
+I++L + LKC
Sbjct: 289 LIEENIKRLDCKNISLKC 306
>gi|295133869|ref|YP_003584545.1| ribosomal RNA small subunit methyltransferase B [Zunongwangia
profunda SM-A87]
gi|294981884|gb|ADF52349.1| ribosomal RNA small subunit methyltransferase B [Zunongwangia
profunda SM-A87]
Length = 411
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
IF+ SF + G +Q+ S + A LD + G+R++D CA GGK+ +A+L+ ++G+
Sbjct: 195 IFKTESFQN---GLFEVQDASSQLVADFLDVKPGDRVVDTCAGAGGKSLHLAALMENKGQ 251
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR 327
V+A+D NK+ ++++ A G I T +D KA+++
Sbjct: 252 VIALDIYGNKLKELKRRAKRAGAHNIETRVIDNNKAIKK 290
>gi|407796647|ref|ZP_11143600.1| Sun protein [Salimicrobium sp. MJ3]
gi|407019163|gb|EKE31882.1| Sun protein [Salimicrobium sp. MJ3]
Length = 450
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG + +Q+ S++ A ++P+ G+ +LD CAAPGGKTT I+ +++EG V A D K
Sbjct: 232 EGLVTIQDQSSMLVAELMNPEPGQTVLDACAAPGGKTTHISEKMKNEGTVYAYDLHKKKA 291
Query: 300 MDIQKLAAEMGLKCITTYKLDALKAV-RRKNESND 333
I++ A + L I DA K + +NE+ D
Sbjct: 292 ALIREKANILRLTNIHAENYDARKLQDKHENETFD 326
>gi|418005334|ref|ZP_12645329.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei UW1]
gi|410547263|gb|EKQ21500.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei UW1]
Length = 446
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLL--RDEGEVVAVDRSH 296
++GE +Q+ S++ A +LD Q G+ +LD CAAPGGKTT IA L + G+V A+D
Sbjct: 228 VKGEYTMQDESSMLVAPSLDIQPGDVVLDACAAPGGKTTHIAQYLDPKQGGQVTALDLHA 287
Query: 297 NKVMDIQKLAAEMGL 311
NKV I K A +GL
Sbjct: 288 NKVRLINKNAKRLGL 302
>gi|325290449|ref|YP_004266630.1| sun protein [Syntrophobotulus glycolicus DSM 8271]
gi|324965850|gb|ADY56629.1| sun protein [Syntrophobotulus glycolicus DSM 8271]
Length = 461
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 216 RASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGK 275
+ EG+ ++ + +L S+ EG +Q+ S + AH L + GER+LD+C APGGK
Sbjct: 221 KTPEGLFIEDFGALDELLSYQ---EGLFTVQDESSQLVAHILGVKPGERVLDVCCAPGGK 277
Query: 276 TTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
TT +A L+ ++G ++ D K+ + +L +G+ I T DA
Sbjct: 278 TTHLAQLMNNQGTIIGNDLYPAKLSLVNELVERLGIGIIQTQAGDA 323
>gi|372210296|ref|ZP_09498098.1| Fmu (Sun) domain-containing protein [Flavobacteriaceae bacterium
S85]
Length = 402
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 220 GIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAI 279
+ +D +F +F G +Q+ S + A L+ G R++D CA GGKT I
Sbjct: 186 ALELDERKNVFTTAAFKS---GLFEMQDASSQLVAEFLEVAPGMRVVDTCAGAGGKTLHI 242
Query: 280 ASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR 327
A+L+ ++G ++A D K+M+++K A G ITT K+++ K +++
Sbjct: 243 AALMENKGSIIATDIYGGKLMELKKRAKRAGAFNITTKKIESTKTIKK 290
>gi|47221584|emb|CAF97849.1| unnamed protein product [Tetraodon nigroviridis]
Length = 448
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G+ LQ S + AL PQ+GE +LDM +APGGKTT IA L+R+ G +VA D
Sbjct: 98 EYLSGQYMLQGASSFLPVMALSPQEGELVLDMSSAPGGKTTYIAQLMRNTGVIVANDANA 157
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R + V +I +L + C
Sbjct: 158 ERLKSVVGNIHRLGVTNTVVC 178
>gi|449485255|ref|XP_002193312.2| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
[Taeniopygia guttata]
Length = 695
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S++ AL PQ+ ERILDMC APGGKT+ IA L+++ G ++A D S
Sbjct: 373 EYLAGHYMLQGASSLLPVMALAPQENERILDMCCAPGGKTSYIAQLMKNTGMILANDSSA 432
Query: 297 NKVMDI 302
++ +
Sbjct: 433 ERLRSV 438
>gi|406986579|gb|EKE07138.1| hypothetical protein ACD_18C00175G0001 [uncultured bacterium]
Length = 320
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNK 298
L G+I+LQ+L S+V LDP+ G+++LD+ +APG KT+ IA +++ +GE+VA +
Sbjct: 87 LNGKIYLQSLASMVPVVVLDPKVGDKVLDLTSAPGSKTSQIAMMMKKDGELVANELDK-- 144
Query: 299 VMDIQKLAAEMGL 311
+ +KLA M L
Sbjct: 145 -IRFEKLAHNMKL 156
>gi|212695669|ref|ZP_03303797.1| hypothetical protein ANHYDRO_00186 [Anaerococcus hydrogenalis DSM
7454]
gi|212677342|gb|EEB36949.1| hypothetical protein ANHYDRO_00186 [Anaerococcus hydrogenalis DSM
7454]
Length = 426
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +Q+ SI L P+K +ILD+CAAPG KT+ +A L + +VA D S NK+
Sbjct: 224 KGLFTIQSEASIKVCEVLSPEKNSQILDLCAAPGTKTSFLAELCENSSRIVANDISFNKL 283
Query: 300 MDIQKLAAEMGLKCITTYKLDA 321
I + +GLK I DA
Sbjct: 284 SKINENIKRLGLKNIEITNFDA 305
>gi|417996491|ref|ZP_12636770.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei M36]
gi|418013111|ref|ZP_12652764.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei Lpc-37]
gi|410535337|gb|EKQ09962.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei M36]
gi|410556058|gb|EKQ29980.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei Lpc-37]
Length = 446
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLL--RDEGEVVAVDRSH 296
++GE +Q+ S++ A +LD Q G+ +LD CAAPGGKTT IA L + G+V A+D
Sbjct: 228 VKGEYTMQDESSMLVAPSLDIQPGDVVLDACAAPGGKTTHIAQYLDPKQGGQVTALDLHA 287
Query: 297 NKVMDIQKLAAEMGL 311
NKV I K A +GL
Sbjct: 288 NKVRLINKNAKRLGL 302
>gi|393768844|ref|ZP_10357375.1| Fmu (Sun) domain-containing protein [Methylobacterium sp. GXF4]
gi|392725672|gb|EIZ83006.1| Fmu (Sun) domain-containing protein [Methylobacterium sp. GXF4]
Length = 459
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 229 IFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGE 288
I LP F EG ++Q+ + + A L PQ G R+LD+CAAPGGKT +A+ +
Sbjct: 234 IPDLPGFQ---EGAWWVQDAAAAIPARLLAPQPGTRVLDLCAAPGGKTMQLAAT---GAQ 287
Query: 289 VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322
V AVDRS ++ +++ A +GL +T DAL
Sbjct: 288 VTAVDRSAPRLERLRENVARLGLD-VTVAVADAL 320
>gi|346322970|gb|EGX92568.1| tRNA (cytosine-5-)-methyltransferase NCL1 [Cordyceps militaris
CM01]
Length = 633
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G LQ S + AL PQ GER+LDM AAPGGKTT A+++++ G +VA D
Sbjct: 320 EYLAGHYILQAASSFLPVMALSPQPGERVLDMAAAPGGKTTHCAAMMKNTGVIVANDPNK 379
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R+ + +I +L A+ + C
Sbjct: 380 ARAKGLIGNIHRLGAKNVIVC 400
>gi|239631985|ref|ZP_04675016.1| tRNA and rRNA cytosine-C5-methylase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301066670|ref|YP_003788693.1| tRNA and rRNA cytosine-C5-methylase [Lactobacillus casei str.
Zhang]
gi|417980353|ref|ZP_12621033.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei 12A]
gi|417983642|ref|ZP_12624278.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei 21/1]
gi|239526450|gb|EEQ65451.1| tRNA and rRNA cytosine-C5-methylase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300439077|gb|ADK18843.1| tRNA and rRNA cytosine-C5-methylase [Lactobacillus casei str.
Zhang]
gi|410524676|gb|EKP99583.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei 12A]
gi|410527911|gb|EKQ02773.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei 21/1]
Length = 446
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLL--RDEGEVVAVDRSH 296
++GE +Q+ S++ A +LD Q G+ +LD CAAPGGKTT IA L + G+V A+D
Sbjct: 228 VKGEYTMQDESSMLVAPSLDIQPGDVVLDACAAPGGKTTHIAQYLDPKQGGQVTALDLHA 287
Query: 297 NKVMDIQKLAAEMGL 311
NKV I K A +GL
Sbjct: 288 NKVRLINKNAKRLGL 302
>gi|148544395|ref|YP_001271765.1| sun protein [Lactobacillus reuteri DSM 20016]
gi|184153759|ref|YP_001842100.1| rRNA methylase [Lactobacillus reuteri JCM 1112]
gi|227363180|ref|ZP_03847314.1| rRNA SAM-dependent methyltransferase RmsB [Lactobacillus reuteri
MM2-3]
gi|325682715|ref|ZP_08162231.1| RNA methyltransferase Sun [Lactobacillus reuteri MM4-1A]
gi|148531429|gb|ABQ83428.1| sun protein [Lactobacillus reuteri DSM 20016]
gi|183225103|dbj|BAG25620.1| rRNA methylase [Lactobacillus reuteri JCM 1112]
gi|227071786|gb|EEI10075.1| rRNA SAM-dependent methyltransferase RmsB [Lactobacillus reuteri
MM2-3]
gi|324977065|gb|EGC14016.1| RNA methyltransferase Sun [Lactobacillus reuteri MM4-1A]
Length = 449
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKV 299
GEI +Q+ +++ ++ + G+++LD CAAPGGKT IA L DE G V A+D +KV
Sbjct: 234 GEITIQDESAMLAVESMHIEPGDKVLDACAAPGGKTVQIAETLADEDGHVDALDIHQHKV 293
Query: 300 MDIQKLAAEMGL-KCITTYKLDA 321
I+K A +G+ K +T + LDA
Sbjct: 294 RLIEKNARRLGVEKRVTAHALDA 316
>gi|417987003|ref|ZP_12627565.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei 32G]
gi|410524067|gb|EKP98984.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei 32G]
Length = 446
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLL--RDEGEVVAVDRSH 296
++GE +Q+ S++ A +LD Q G+ +LD CAAPGGKTT IA L + G+V A+D
Sbjct: 228 VKGEYTMQDESSMLVAPSLDIQPGDVVLDACAAPGGKTTHIAQYLDPKQGGQVTALDLHA 287
Query: 297 NKVMDIQKLAAEMGL 311
NKV I K A +GL
Sbjct: 288 NKVRLINKNAKRLGL 302
>gi|254415201|ref|ZP_05028963.1| ribosomal RNA small subunit methyltransferase B [Coleofasciculus
chthonoplastes PCC 7420]
gi|196178007|gb|EDX73009.1| ribosomal RNA small subunit methyltransferase B [Coleofasciculus
chthonoplastes PCC 7420]
Length = 448
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 232 LPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVA 291
LP F EG +Q+ + + +H L+PQ + I+D CAAPGGKTT +A L+RD G + A
Sbjct: 231 LPGFN---EGWWTIQDSSAQLVSHLLNPQPHDVIIDACAAPGGKTTHLAELMRDRGTIWA 287
Query: 292 VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTS 351
D++ +++ ++ + L+ I D S D P D + + S
Sbjct: 288 CDKAASRLKKVKANTQRLQLQSIQICPGD----------SRDFPQFTQKADTVLLDAPCS 337
Query: 352 DSMKLHKE 359
LH+
Sbjct: 338 GLGTLHRR 345
>gi|116495106|ref|YP_806840.1| tRNA and rRNA cytosine-C5-methylase [Lactobacillus casei ATCC 334]
gi|116105256|gb|ABJ70398.1| tRNA and rRNA cytosine-C5-methylase [Lactobacillus casei ATCC 334]
Length = 446
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLL--RDEGEVVAVDRSH 296
++GE +Q+ S++ A +LD Q G+ +LD CAAPGGKTT IA L + G+V A+D
Sbjct: 228 VKGEYTMQDESSMLVAPSLDIQPGDVVLDACAAPGGKTTHIAQYLDPKQGGQVTALDLHA 287
Query: 297 NKVMDIQKLAAEMGL 311
NKV I K A +GL
Sbjct: 288 NKVRLINKNAKRLGL 302
>gi|403386878|ref|ZP_10928935.1| 16S rRNA methyltransferase B [Clostridium sp. JC122]
Length = 442
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 227 NRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDE 286
NR+F+ EG + +Q+ +++ A +++ R+LD+C+APGGKTT I+ ++ +
Sbjct: 224 NRLFK--------EGYVTVQDESAMLVAPSMELNSDSRVLDLCSAPGGKTTHISEIMDNT 275
Query: 287 GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
GEV+A D NK+ I+ A + + I LDA
Sbjct: 276 GEVLAFDIHENKLSLIKDNAKRLNINNIKCETLDA 310
>gi|255721331|ref|XP_002545600.1| nucleolar protein NOP2 [Candida tropicalis MYA-3404]
gi|240136089|gb|EER35642.1| nucleolar protein NOP2 [Candida tropicalis MYA-3404]
Length = 623
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G LQ S + AL+PQ+ ERILDM AAPGGKTT I++L+++ G V A D
Sbjct: 330 EYLAGHYILQAASSFLPVMALEPQENERILDMAAAPGGKTTYISALMKNTGCVFANDANK 389
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R+ + + +I +L + + C
Sbjct: 390 ARTKSLIANIHRLGCKNTIVC 410
>gi|227534879|ref|ZP_03964928.1| rRNA SAM-dependent methyltransferase RmsB [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
gi|227187635|gb|EEI67702.1| rRNA SAM-dependent methyltransferase RmsB [Lactobacillus paracasei
subsp. paracasei ATCC 25302]
Length = 446
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLL--RDEGEVVAVDRSH 296
++GE +Q+ S++ A +LD Q G+ +LD CAAPGGKTT IA L + G+V A+D
Sbjct: 228 VKGEYTMQDESSMLVAPSLDIQPGDVVLDACAAPGGKTTHIAQYLDPKQGGQVTALDLHA 287
Query: 297 NKVMDIQKLAAEMGL 311
NKV I K A +GL
Sbjct: 288 NKVRLINKNAKRLGL 302
>gi|145344001|ref|XP_001416528.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576754|gb|ABO94821.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 485
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ + G LQ+ S + AL PQ+GER+LDM AAPGGKTT +A+L+R+ G + A +
Sbjct: 248 EYMAGHYILQSASSFLPCMALAPQEGERVLDMAAAPGGKTTYLAALMRNTGMIFANEYQK 307
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R ++ V ++Q+L C
Sbjct: 308 KRLNSLVANLQRLGCTNSTVC 328
>gi|70985320|ref|XP_748166.1| nucleolar RNA methyltransferase (Nop2) [Aspergillus fumigatus
Af293]
gi|66845794|gb|EAL86128.1| nucleolar RNA methyltransferase (Nop2), putative [Aspergillus
fumigatus Af293]
gi|159125911|gb|EDP51027.1| nucleolar RNA methyltransferase (Nop2), putative [Aspergillus
fumigatus A1163]
Length = 751
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 47/88 (53%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S + AL PQ ER+LDM AAPGGKTT I++L+R+ G V+A D S
Sbjct: 356 EYLAGHYILQAASSFLPVMALAPQPNERVLDMAAAPGGKTTYISALMRNTGCVIANDASK 415
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDALKA 324
+ + +G K LDA A
Sbjct: 416 PRAKGLIGNIHRLGCKNTIVTNLDARTA 443
>gi|418002299|ref|ZP_12642420.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei UCD174]
gi|410544461|gb|EKQ18787.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei UCD174]
Length = 446
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLL--RDEGEVVAVDRSH 296
++GE +Q+ S++ A +LD Q G+ +LD CAAPGGKTT IA L + G+V A+D
Sbjct: 228 VKGEYTMQDESSMLVAPSLDIQPGDVVLDACAAPGGKTTHIAQYLDPKQGGQVTALDLHA 287
Query: 297 NKVMDIQKLAAEMGL 311
NKV I K A +GL
Sbjct: 288 NKVRLINKNAKRLGL 302
>gi|365157094|ref|ZP_09353375.1| ribosomal RNA small subunit methyltransferase B [Bacillus smithii
7_3_47FAA]
gi|363625828|gb|EHL76839.1| ribosomal RNA small subunit methyltransferase B [Bacillus smithii
7_3_47FAA]
Length = 446
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 54/84 (64%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S++ AHA+ + G +LD CAAPGGKTT +A ++ G+V A+D +K+
Sbjct: 230 KGLMTIQDESSMLVAHAMKLEPGMVVLDACAAPGGKTTHMAEKMQGTGKVYALDLHPHKI 289
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I+ A +GL+ I++ LD+ K
Sbjct: 290 KLIEDNAVRLGLENISSLPLDSRK 313
>gi|351705362|gb|EHB08281.1| Putative methyltransferase NSUN5 [Heterocephalus glaber]
Length = 496
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 194 YFERSGL-YIGQGTAMMSRAGIFRASEGIAVDMHNRIFQL---PSFYDVLE------GEI 243
YF+R G Y G+ +++ RA +G + + +L P+ D+ E G +
Sbjct: 187 YFKRKGFSYQGRASSLED----LRALKGKHFFLDPLLPELLVFPAQTDLHEHPLYQAGHL 242
Query: 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQ 303
LQ+ S + A L P G ++D CAAPG KT+ +A+LL+++G++ A D ++ +
Sbjct: 243 ILQDKASCLPAMLLAPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 302
Query: 304 KLAAEMGLKCITTYKLDAL 322
L A G+ C + D L
Sbjct: 303 TLLARAGVSCCELAEEDFL 321
>gi|417919600|ref|ZP_12563129.1| ribosomal RNA small subunit methyltransferase B [Streptococcus
australis ATCC 700641]
gi|342832367|gb|EGU66663.1| ribosomal RNA small subunit methyltransferase B [Streptococcus
australis ATCC 700641]
Length = 433
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G++ +Q+ S + A AL+ Q +++LD CAAPGGKTT +AS L D G+V A+D +K+
Sbjct: 221 QGKLTIQDETSQLVAPALEVQPSDQVLDACAAPGGKTTHLASYLVD-GQVTALDLYDHKL 279
Query: 300 MDIQKLAAEMGL-KCITTYKLDALK 323
IQ+ A +G+ I T KLDA K
Sbjct: 280 QLIQENAERLGVADKIQTKKLDASK 304
>gi|223984315|ref|ZP_03634458.1| hypothetical protein HOLDEFILI_01752 [Holdemania filiformis DSM
12042]
gi|223963715|gb|EEF68084.1| hypothetical protein HOLDEFILI_01752 [Holdemania filiformis DSM
12042]
Length = 412
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
EG+I +Q+ S A LDP+ + + D C+APG KTT +A+++ +EG ++A D +++
Sbjct: 212 EGKIVIQDRSSQQVALMLDPKPNDTVFDACSAPGTKTTQLAAMMNNEGSILACDLHAHRL 271
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
+++ A G I T LDA +A
Sbjct: 272 ALVEEAAQRCGATIIQTRTLDAAQA 296
>gi|191638611|ref|YP_001987777.1| RRNA methylase () [Lactobacillus casei BL23]
gi|385820326|ref|YP_005856713.1| Ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei LC2W]
gi|385823520|ref|YP_005859862.1| Ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei BD-II]
gi|190712913|emb|CAQ66919.1| RRNA methylase (Putative) [Lactobacillus casei BL23]
gi|327382653|gb|AEA54129.1| Ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei LC2W]
gi|327385847|gb|AEA57321.1| Ribosomal RNA small subunit methyltransferase B [Lactobacillus
casei BD-II]
Length = 446
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLL--RDEGEVVAVDRSH 296
++GE +Q+ S++ A +LD Q G+ +LD CAAPGGKTT IA L + G+V A+D
Sbjct: 228 VKGEYTMQDESSMLVAPSLDIQPGDVVLDACAAPGGKTTHIAQYLDPKQGGQVTALDLHA 287
Query: 297 NKVMDIQKLAAEMGL 311
NKV I K A +GL
Sbjct: 288 NKVRLINKNAKRLGL 302
>gi|123446653|ref|XP_001312075.1| NOL1/NOP2/sun family RNA methylase containing protein [Trichomonas
vaginalis G3]
gi|121893909|gb|EAX99145.1| NOL1/NOP2/sun family putative RNA methylase containing protein
[Trichomonas vaginalis G3]
Length = 476
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G +Q+ S + AL+PQ G R LDMCAAPGGKTT +A L++++G ++A D
Sbjct: 198 EYLSGHYMIQSPSSFLPVMALNPQPGMRTLDMCAAPGGKTTHMAQLMKNQGVIIANDINR 257
Query: 294 -RSHNKVMDIQKLA 306
R+ + +I +L
Sbjct: 258 TRAQALIANIHRLG 271
>gi|116747600|ref|YP_844287.1| sun protein [Syntrophobacter fumaroxidans MPOB]
gi|116696664|gb|ABK15852.1| sun protein [Syntrophobacter fumaroxidans MPOB]
Length = 449
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G + +Q+ S + + + P+ GER+LD+CA GGK+T + L+ D GEVVAVD S K+
Sbjct: 234 DGLVQVQDEASQIVSTLVAPRAGERVLDLCAGFGGKSTHLGILMGDRGEVVAVDNSAWKL 293
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
+++K A GL+ I D +
Sbjct: 294 EELRKNARRQGLRIIKPRTADLFE 317
>gi|294500982|ref|YP_003564682.1| ribosomal RNA small subunit methyltransferase B [Bacillus
megaterium QM B1551]
gi|294350919|gb|ADE71248.1| ribosomal RNA small subunit methyltransferase B [Bacillus
megaterium QM B1551]
Length = 446
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 25/139 (17%)
Query: 186 QGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFL 245
+G +P +F L + +G A ++A FR EG +
Sbjct: 201 EGIVVEPGHFVEEALEVQKGNAAHTQA--FR-----------------------EGMFTV 235
Query: 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKL 305
Q+ S++ AHAL + E ILD CAAPGGK+T IA L++ G+V+++D +KV I +
Sbjct: 236 QDESSMLVAHALSAEAEELILDSCAAPGGKSTHIAEQLKNSGKVISLDIHDHKVKLIAQQ 295
Query: 306 AAEMGLKCITTYKLDALKA 324
A + L I D+ KA
Sbjct: 296 AERLHLTNIEPTVQDSRKA 314
>gi|406931867|gb|EKD67059.1| hypothetical protein ACD_48C00618G0001 [uncultured bacterium]
Length = 300
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+G ++Q+L S++ ALDP+ E+ILD+ AAPG KTT IA+L+ + G++VA D S
Sbjct: 90 DGLFYIQSLSSMLPVIALDPKPNEKILDIAAAPGSKTTQIAALMNNTGQIVANDNSR 146
>gi|327355493|gb|EGE84350.1| nucleolar RNA methyltransferase [Ajellomyces dermatitidis ATCC
18188]
Length = 692
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S + AL PQ ER+LDM AAPGGKTT I++L+R+ G V+A D S
Sbjct: 336 EYLAGHYILQAASSFLPVMALAPQPNERVLDMAAAPGGKTTYISALMRNTGCVLANDASK 395
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDALKA 324
+ + +G K LDA +A
Sbjct: 396 PRAKGLIGNIHRLGCKNTIVSNLDAREA 423
>gi|291236130|ref|XP_002738014.1| PREDICTED: NOL1/NOP2/Sun domain family, member 5-like [Saccoglossus
kowalevskii]
Length = 697
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G+I LQ+ S + AH L P G ++D CAAPG KT+ +AS++ + G++ A D ++
Sbjct: 392 QGDIILQDKASCIPAHVLCPPLGSHVIDTCAAPGNKTSHLASIINNTGKIYAFDLDTKRI 451
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
+ L A+ G+ + D LK
Sbjct: 452 GTMGNLTAKAGVMNTQLFNQDFLKT 476
>gi|452206544|ref|YP_007486666.1| tRNA/rRNA cytosine-C5-methylase [Natronomonas moolapensis 8.8.11]
gi|452082644|emb|CCQ35909.1| tRNA/rRNA cytosine-C5-methylase [Natronomonas moolapensis 8.8.11]
Length = 303
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 223 VDMHNRIFQLP------SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKT 276
V H+ +F+L + + + G ++ Q S V A ALDP GER+LD CAAPG KT
Sbjct: 55 VGWHDGLFRLGGDESPGNSWPFVHGWVYGQEEVSAVPALALDPDPGERVLDCCAAPGSKT 114
Query: 277 TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321
T +A+ + D G +V D + ++ ++ A G+ + + DA
Sbjct: 115 TQLAARMDDRGLLVGNDNNLGRLSALRSNAERCGVTNLVVTRADA 159
>gi|406863282|gb|EKD16330.1| tRNA (cytosine-5-)-methyltransferase NCL1 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 1016
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVD--- 293
+ L G LQ S + AL PQ+ ER+LDM AAPGGKTT IA+L+++ G + A D
Sbjct: 352 EYLAGHYILQAASSFLPVMALAPQENERVLDMAAAPGGKTTHIAALMKNTGCIFANDSNK 411
Query: 294 -RSHNKVMDIQKLAAEMGLKC 313
R+ + +I +L A+ + C
Sbjct: 412 SRAKGLIGNIHRLGAKNTIVC 432
>gi|319947546|ref|ZP_08021776.1| RNA methyltransferase Sun [Streptococcus australis ATCC 700641]
gi|319746234|gb|EFV98497.1| RNA methyltransferase Sun [Streptococcus australis ATCC 700641]
Length = 440
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G++ +Q+ S + A AL+ Q +++LD CAAPGGKTT +AS L D G+V A+D +K+
Sbjct: 228 QGKLTIQDETSQLVAPALEVQPSDQVLDACAAPGGKTTHLASYLVD-GQVTALDLYDHKL 286
Query: 300 MDIQKLAAEMGL-KCITTYKLDALK 323
IQ+ A +G+ I T KLDA K
Sbjct: 287 QLIQENAERLGVADKIQTKKLDASK 311
>gi|295658139|ref|XP_002789632.1| S-adenosylmethionine-dependent methyltransferase superfamily
domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226283185|gb|EEH38751.1| Nop16-like protein NOP2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 677
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 48/89 (53%)
Query: 237 DVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296
+ L G LQ S + AL PQ ERILDM AAPGGKTT I++L+R+ G V+A D S
Sbjct: 350 EYLAGHYILQAASSFLPVMALAPQPNERILDMAAAPGGKTTYISALMRNTGCVLANDASK 409
Query: 297 NKVMDIQKLAAEMGLKCITTYKLDALKAV 325
+ + +G K LDA +A
Sbjct: 410 LRAKGLIGNIHRLGCKNTIVSHLDAREAF 438
>gi|169333678|ref|ZP_02860871.1| hypothetical protein ANASTE_00062 [Anaerofustis stercorihominis DSM
17244]
gi|169259672|gb|EDS73638.1| ribosomal RNA small subunit methyltransferase B [Anaerofustis
stercorihominis DSM 17244]
Length = 450
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 219 EGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTA 278
EGI V H + L + +G +Q+ +V AH+LD ++ ++LDMCAAPGGK+
Sbjct: 217 EGIEVLSHLNVTLLEEYK---KGLFSIQDCAGMVVAHSLDVKEDMKVLDMCAAPGGKSMH 273
Query: 279 IASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320
+ L+ + G++V+ D K+ + ++G+ I T KLD
Sbjct: 274 TSELMNNSGDIVSCDIYTKKLEIMNFRMKQLGINNIMTKKLD 315
>gi|396081661|gb|AFN83276.1| Nop2-like nucleolar protein [Encephalitozoon romaleae SJ-2008]
Length = 365
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 52/85 (61%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G+ +QN+ S + A+ L+P++ R++D C+APG KT+ ++ ++++ G + A +RS +
Sbjct: 155 DGKFVIQNISSCLPAYILNPKECSRVIDTCSAPGNKTSQLSMIMKNTGRIYAFERSETRA 214
Query: 300 MDIQKLAAEMGLKCITTYKLDALKA 324
+Q +G+ + + D +KA
Sbjct: 215 KTLQDQLERLGVSNVEVIENDFMKA 239
>gi|374296871|ref|YP_005047062.1| ribosomal RNA small subunit methyltransferase RsmB/transcription
antitermination factor NusB [Clostridium clariflavum DSM
19732]
gi|359826365|gb|AEV69138.1| ribosomal RNA small subunit methyltransferase RsmB/transcription
antitermination factor NusB [Clostridium clariflavum DSM
19732]
Length = 450
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%)
Query: 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKV 299
+G +Q+ S++ A L+P+ + ++D+C+APGGK T IA L+++ G+V+A D +K+
Sbjct: 234 QGLFQVQDESSMIVAQVLNPKPKDLVIDVCSAPGGKATHIAELMQNTGQVIARDVHEHKI 293
Query: 300 MDIQKLAAEMGLKCITTYKLDALK 323
I++ A +G+ I DA K
Sbjct: 294 KLIEEAAIRLGIGIIKAEVFDAQK 317
>gi|358419347|ref|XP_593209.4| PREDICTED: putative methyltransferase NSUN5 [Bos taurus]
gi|359080487|ref|XP_002698734.2| PREDICTED: putative methyltransferase NSUN5 [Bos taurus]
Length = 395
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVM 300
G + LQ+ S + A L P G ++D CAAPG KT+ +A+LL+++G++ A D+ ++
Sbjct: 139 GHLILQDKASCLPAMLLAPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDQDAKRLA 198
Query: 301 DIQKLAAEMGLKCITTYKLDAL 322
+ L A G+ C + D L
Sbjct: 199 SMATLLARAGVSCCELAEQDFL 220
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,392,858,095
Number of Sequences: 23463169
Number of extensions: 261861751
Number of successful extensions: 758321
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5515
Number of HSP's successfully gapped in prelim test: 981
Number of HSP's that attempted gapping in prelim test: 750653
Number of HSP's gapped (non-prelim): 8111
length of query: 422
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 277
effective length of database: 8,957,035,862
effective search space: 2481098933774
effective search space used: 2481098933774
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)