Query 014571
Match_columns 422
No_of_seqs 413 out of 2219
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 13:58:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014571.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014571hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fzv_A Putative methyltransfer 100.0 1.4E-36 4.9E-41 306.9 17.1 159 228-406 113-282 (359)
2 2frx_A Hypothetical protein YE 100.0 8.6E-35 2.9E-39 304.3 12.9 217 169-407 5-245 (479)
3 3m6w_A RRNA methylase; rRNA me 100.0 8.4E-35 2.9E-39 302.9 11.9 212 172-406 2-227 (464)
4 2yxl_A PH0851 protein, 450AA l 100.0 4.5E-33 1.5E-37 288.8 21.3 231 13-406 155-387 (450)
5 3m4x_A NOL1/NOP2/SUN family pr 100.0 7.3E-35 2.5E-39 302.8 7.1 210 170-406 6-232 (456)
6 2b9e_A NOL1/NOP2/SUN domain fa 100.0 1.4E-33 4.9E-38 279.8 15.5 194 196-407 8-233 (309)
7 1ixk_A Methyltransferase; open 100.0 3.6E-34 1.2E-38 284.0 11.0 219 166-407 10-245 (315)
8 1sqg_A SUN protein, FMU protei 100.0 3.4E-32 1.2E-36 280.4 21.0 230 13-407 143-373 (429)
9 3ajd_A Putative methyltransfer 100.0 6.6E-29 2.3E-33 241.0 12.8 192 193-407 4-210 (274)
10 3id6_C Fibrillarin-like rRNA/T 99.4 1.1E-12 3.8E-17 124.8 11.1 83 258-354 73-155 (232)
11 4dmg_A Putative uncharacterize 99.4 2.5E-12 8.4E-17 131.2 11.5 131 238-406 193-324 (393)
12 3lpm_A Putative methyltransfer 99.3 1.9E-11 6.6E-16 116.4 15.1 144 240-406 20-174 (259)
13 2b3t_A Protein methyltransfera 99.3 2.4E-11 8.1E-16 116.9 12.3 146 240-406 86-236 (276)
14 1wxx_A TT1595, hypothetical pr 99.3 6.5E-12 2.2E-16 127.1 8.1 133 239-407 191-324 (382)
15 3v97_A Ribosomal RNA large sub 99.2 1.8E-11 6.2E-16 133.4 11.1 135 239-408 520-657 (703)
16 2igt_A SAM dependent methyltra 99.2 2.1E-11 7E-16 121.6 10.6 137 239-406 130-270 (332)
17 3c0k_A UPF0064 protein YCCW; P 99.2 1.7E-11 5.8E-16 124.5 9.8 135 238-406 200-337 (396)
18 2as0_A Hypothetical protein PH 99.2 3.4E-11 1.2E-15 122.2 10.4 135 239-406 197-333 (396)
19 3u81_A Catechol O-methyltransf 99.2 1.2E-10 4.2E-15 108.0 13.2 103 244-355 41-144 (221)
20 1uwv_A 23S rRNA (uracil-5-)-me 99.2 4.9E-11 1.7E-15 122.8 10.8 140 254-415 279-428 (433)
21 3bt7_A TRNA (uracil-5-)-methyl 99.2 6E-11 2.1E-15 119.5 10.2 149 255-415 208-365 (369)
22 3tma_A Methyltransferase; thum 99.2 1.9E-10 6.5E-15 114.8 13.3 122 251-406 193-315 (354)
23 2b78_A Hypothetical protein SM 99.2 6.9E-11 2.3E-15 119.9 10.0 135 239-406 192-329 (385)
24 3gdh_A Trimethylguanosine synt 99.2 1.1E-10 3.7E-15 109.2 10.4 93 249-360 66-159 (241)
25 2dul_A N(2),N(2)-dimethylguano 99.1 8.4E-11 2.9E-15 119.3 9.7 82 261-357 47-143 (378)
26 3duw_A OMT, O-methyltransferas 99.1 1.3E-10 4.3E-15 107.5 10.1 102 245-356 42-144 (223)
27 2gpy_A O-methyltransferase; st 99.1 9.9E-11 3.4E-15 109.2 9.0 104 240-356 33-137 (233)
28 3eey_A Putative rRNA methylase 99.1 5.8E-10 2E-14 100.9 12.1 119 257-407 18-138 (197)
29 3evz_A Methyltransferase; NYSG 99.1 7.7E-10 2.6E-14 102.5 12.9 125 257-406 51-177 (230)
30 3axs_A Probable N(2),N(2)-dime 99.1 1.5E-10 5E-15 118.1 8.6 83 260-356 51-136 (392)
31 1o54_A SAM-dependent O-methylt 99.1 9.8E-10 3.3E-14 105.5 13.8 96 243-356 96-192 (277)
32 4df3_A Fibrillarin-like rRNA/T 99.1 2.3E-10 7.8E-15 108.9 9.1 88 257-358 73-160 (233)
33 2jjq_A Uncharacterized RNA met 99.1 2E-10 7E-15 118.2 9.2 134 252-415 281-423 (425)
34 1m6y_A S-adenosyl-methyltransf 99.1 1.7E-10 5.7E-15 113.7 7.4 95 252-358 17-111 (301)
35 3tr6_A O-methyltransferase; ce 99.1 3.9E-10 1.3E-14 104.2 9.4 101 245-354 48-149 (225)
36 1yb2_A Hypothetical protein TA 99.1 3E-10 1E-14 109.2 9.0 100 239-354 88-188 (275)
37 3mti_A RRNA methylase; SAM-dep 99.1 1E-09 3.5E-14 98.2 11.6 115 258-407 19-134 (185)
38 1i1n_A Protein-L-isoaspartate 99.0 8.1E-10 2.8E-14 102.2 11.2 98 243-355 56-161 (226)
39 3tfw_A Putative O-methyltransf 99.0 5.2E-10 1.8E-14 106.1 10.1 101 245-357 47-148 (248)
40 3ntv_A MW1564 protein; rossman 99.0 6E-10 2E-14 104.5 10.4 121 241-406 51-174 (232)
41 3dou_A Ribosomal RNA large sub 99.0 4.1E-10 1.4E-14 103.2 8.6 114 259-406 23-137 (191)
42 4dzr_A Protein-(glutamine-N5) 99.0 5.6E-11 1.9E-15 107.8 2.6 131 260-406 29-163 (215)
43 3c3y_A Pfomt, O-methyltransfer 99.0 8.6E-10 2.9E-14 104.0 10.6 125 245-407 54-180 (237)
44 3k6r_A Putative transferase PH 99.0 4.9E-10 1.7E-14 109.2 8.7 85 259-361 123-208 (278)
45 3mb5_A SAM-dependent methyltra 99.0 1E-09 3.4E-14 103.4 10.0 94 247-356 79-173 (255)
46 2pwy_A TRNA (adenine-N(1)-)-me 99.0 2.4E-09 8.2E-14 100.6 11.9 91 251-356 86-177 (258)
47 1nv8_A HEMK protein; class I a 99.0 9E-10 3.1E-14 107.2 9.2 139 241-406 100-247 (284)
48 1i9g_A Hypothetical protein RV 99.0 3.8E-09 1.3E-13 100.8 13.3 91 249-354 87-180 (280)
49 3p9n_A Possible methyltransfer 99.0 2.3E-09 7.9E-14 96.7 10.8 82 260-356 43-124 (189)
50 3lbf_A Protein-L-isoaspartate 99.0 2.8E-09 9.4E-14 97.3 11.4 98 240-355 56-153 (210)
51 3e05_A Precorrin-6Y C5,15-meth 99.0 3E-09 1E-13 96.9 11.2 99 240-355 20-118 (204)
52 2b25_A Hypothetical protein; s 99.0 2.7E-09 9.1E-14 105.5 11.2 94 250-356 94-198 (336)
53 3dr5_A Putative O-methyltransf 98.9 2.6E-09 9E-14 100.0 10.4 86 256-354 51-138 (221)
54 2ozv_A Hypothetical protein AT 98.9 1.9E-09 6.3E-14 103.2 9.1 141 248-406 23-168 (260)
55 3c3p_A Methyltransferase; NP_9 98.9 2.5E-09 8.4E-14 98.1 9.4 95 245-354 40-135 (210)
56 2frn_A Hypothetical protein PH 98.9 2.3E-09 7.8E-14 103.7 9.4 85 259-361 123-208 (278)
57 1dus_A MJ0882; hypothetical pr 98.9 1.4E-08 4.9E-13 90.1 13.6 89 248-355 39-129 (194)
58 1yzh_A TRNA (guanine-N(7)-)-me 98.9 1.1E-08 3.8E-13 94.1 12.8 115 259-406 39-154 (214)
59 3a27_A TYW2, uncharacterized p 98.9 3.6E-09 1.2E-13 102.0 9.9 83 256-355 114-196 (272)
60 2h1r_A Dimethyladenosine trans 98.9 3.4E-09 1.2E-13 103.8 9.6 98 243-360 24-121 (299)
61 3r3h_A O-methyltransferase, SA 98.9 4E-10 1.4E-14 106.9 2.6 104 243-355 42-146 (242)
62 3njr_A Precorrin-6Y methylase; 98.9 9.8E-09 3.4E-13 94.6 11.7 87 249-353 43-130 (204)
63 1dl5_A Protein-L-isoaspartate 98.9 8.2E-09 2.8E-13 101.4 11.7 98 246-358 60-157 (317)
64 1wy7_A Hypothetical protein PH 98.9 7.5E-09 2.6E-13 94.2 10.2 79 258-357 46-124 (207)
65 2fca_A TRNA (guanine-N(7)-)-me 98.9 1.3E-08 4.5E-13 94.2 11.9 115 260-407 37-152 (213)
66 3tm4_A TRNA (guanine N2-)-meth 98.9 1.3E-08 4.3E-13 102.7 12.7 119 259-412 215-334 (373)
67 2ift_A Putative methylase HI07 98.9 4.4E-09 1.5E-13 96.5 8.5 80 261-355 53-135 (201)
68 2qm3_A Predicted methyltransfe 98.8 7.7E-09 2.6E-13 104.1 10.3 105 239-358 149-254 (373)
69 2fpo_A Methylase YHHF; structu 98.8 6.5E-09 2.2E-13 95.4 8.8 79 261-355 54-132 (202)
70 3grz_A L11 mtase, ribosomal pr 98.8 1.2E-08 4.1E-13 92.9 10.3 87 250-355 47-135 (205)
71 4dcm_A Ribosomal RNA large sub 98.8 1.8E-08 6E-13 102.0 12.4 122 246-406 207-332 (375)
72 2avd_A Catechol-O-methyltransf 98.8 4.1E-09 1.4E-13 97.5 7.1 97 249-354 57-154 (229)
73 3dxy_A TRNA (guanine-N(7)-)-me 98.8 1.6E-08 5.3E-13 94.5 11.1 116 260-407 33-149 (218)
74 2pbf_A Protein-L-isoaspartate 98.8 1.7E-08 5.8E-13 93.3 10.7 93 253-356 70-173 (227)
75 3fpf_A Mtnas, putative unchara 98.8 1.7E-08 5.8E-13 99.2 11.1 81 255-353 116-196 (298)
76 1sui_A Caffeoyl-COA O-methyltr 98.8 8.5E-09 2.9E-13 98.0 8.7 105 244-356 62-167 (247)
77 4gek_A TRNA (CMO5U34)-methyltr 98.8 1.9E-08 6.6E-13 96.6 11.3 78 245-324 56-135 (261)
78 2plw_A Ribosomal RNA methyltra 98.8 1E-08 3.6E-13 92.7 8.7 121 259-406 20-152 (201)
79 3ll7_A Putative methyltransfer 98.8 9.8E-09 3.4E-13 105.1 9.4 83 260-358 92-176 (410)
80 1nt2_A Fibrillarin-like PRE-rR 98.8 1.6E-08 5.4E-13 93.9 9.9 81 257-352 53-133 (210)
81 2esr_A Methyltransferase; stru 98.8 1.8E-08 6.2E-13 89.4 9.9 81 259-355 29-110 (177)
82 2yxd_A Probable cobalt-precorr 98.8 2.7E-08 9.2E-13 87.7 10.9 90 246-354 20-109 (183)
83 3hm2_A Precorrin-6Y C5,15-meth 98.8 4.1E-08 1.4E-12 86.6 11.9 99 240-355 5-104 (178)
84 2vdv_E TRNA (guanine-N(7)-)-me 98.8 2.1E-08 7.2E-13 94.5 10.6 117 259-407 47-172 (246)
85 1xxl_A YCGJ protein; structura 98.8 1.9E-08 6.5E-13 94.1 10.0 90 245-352 5-94 (239)
86 2yxe_A Protein-L-isoaspartate 98.8 3.3E-08 1.1E-12 90.4 11.3 101 240-355 56-156 (215)
87 1r18_A Protein-L-isoaspartate( 98.8 1.3E-08 4.5E-13 94.4 8.4 100 241-355 62-173 (227)
88 1o9g_A RRNA methyltransferase; 98.8 1.2E-08 4E-13 96.3 8.0 124 258-409 48-215 (250)
89 2f8l_A Hypothetical protein LM 98.8 5.7E-09 1.9E-13 103.7 5.8 123 258-406 127-254 (344)
90 1nkv_A Hypothetical protein YJ 98.7 6.6E-08 2.2E-12 90.5 12.5 111 252-407 27-139 (256)
91 3g89_A Ribosomal RNA small sub 98.7 2.5E-08 8.4E-13 95.1 9.4 81 259-352 78-158 (249)
92 3r90_A Malignant T cell-amplif 98.7 6E-09 2E-13 96.0 4.6 74 122-226 91-167 (188)
93 2h00_A Methyltransferase 10 do 98.7 3.4E-08 1.2E-12 93.1 9.6 88 261-359 65-154 (254)
94 1ws6_A Methyltransferase; stru 98.7 4.6E-08 1.6E-12 85.5 9.7 81 261-356 41-121 (171)
95 3d79_A PUA domain, putative un 98.7 1.9E-08 6.6E-13 91.8 7.5 72 124-226 95-166 (179)
96 1ej0_A FTSJ; methyltransferase 98.7 1.8E-08 6.1E-13 87.7 7.0 116 258-407 19-135 (180)
97 1jg1_A PIMT;, protein-L-isoasp 98.7 5.2E-08 1.8E-12 91.0 10.5 100 239-355 69-168 (235)
98 1q7h_A Conserved hypothetical 98.7 1.3E-08 4.3E-13 90.6 5.9 73 122-226 69-141 (153)
99 2nyu_A Putative ribosomal RNA 98.7 2.6E-08 8.8E-13 89.5 8.0 115 259-407 20-144 (196)
100 3dmg_A Probable ribosomal RNA 98.7 7.1E-08 2.4E-12 97.8 12.1 120 247-407 213-339 (381)
101 1g8a_A Fibrillarin-like PRE-rR 98.7 3.7E-08 1.3E-12 91.2 9.0 82 259-354 71-152 (227)
102 2fhp_A Methylase, putative; al 98.7 4.6E-08 1.6E-12 86.9 9.1 83 259-354 42-125 (187)
103 3orh_A Guanidinoacetate N-meth 98.7 5E-08 1.7E-12 91.8 9.8 112 259-408 58-170 (236)
104 2r6z_A UPF0341 protein in RSP 98.7 1.2E-08 4E-13 98.2 5.5 94 250-357 72-173 (258)
105 1xdz_A Methyltransferase GIDB; 98.7 5.4E-08 1.9E-12 91.3 9.6 83 258-353 67-149 (240)
106 2p41_A Type II methyltransfera 98.7 3.4E-09 1.2E-13 104.4 1.3 104 259-406 80-189 (305)
107 2ipx_A RRNA 2'-O-methyltransfe 98.7 5.4E-08 1.9E-12 90.6 9.5 85 256-354 72-156 (233)
108 3kkz_A Uncharacterized protein 98.7 1.4E-07 4.9E-12 89.3 12.5 110 254-408 38-150 (267)
109 1vl5_A Unknown conserved prote 98.7 6.7E-08 2.3E-12 91.1 9.9 95 239-351 15-109 (260)
110 3dh0_A SAM dependent methyltra 98.7 6.4E-08 2.2E-12 88.5 9.5 87 251-352 27-113 (219)
111 1inl_A Spermidine synthase; be 98.6 5.1E-08 1.7E-12 95.3 8.8 110 261-407 90-204 (296)
112 1zx0_A Guanidinoacetate N-meth 98.6 1.1E-07 3.9E-12 88.6 10.8 112 259-408 58-170 (236)
113 2okc_A Type I restriction enzy 98.6 4.4E-08 1.5E-12 100.9 8.7 141 240-406 150-305 (445)
114 3zv0_C H/ACA ribonucleoprotein 98.6 3.3E-08 1.1E-12 91.0 6.8 74 122-227 74-147 (195)
115 2yvl_A TRMI protein, hypotheti 98.6 1.3E-07 4.5E-12 88.0 10.9 87 250-354 80-167 (248)
116 1zq9_A Probable dimethyladenos 98.6 1E-07 3.6E-12 92.5 10.5 95 246-360 13-108 (285)
117 2yx1_A Hypothetical protein MJ 98.6 7.2E-08 2.5E-12 95.8 9.4 80 260-361 194-274 (336)
118 1vbf_A 231AA long hypothetical 98.6 1.2E-07 4.1E-12 87.7 10.0 96 240-355 49-144 (231)
119 3cbg_A O-methyltransferase; cy 98.6 6.3E-08 2.1E-12 90.7 8.2 99 247-354 58-157 (232)
120 2pjd_A Ribosomal RNA small sub 98.6 2.8E-07 9.7E-12 91.4 13.0 120 247-407 182-302 (343)
121 1l3i_A Precorrin-6Y methyltran 98.6 2E-07 6.8E-12 82.5 10.4 91 246-354 18-109 (192)
122 2oyr_A UPF0341 protein YHIQ; a 98.6 8.5E-08 2.9E-12 92.4 8.2 92 249-357 74-176 (258)
123 3vc1_A Geranyl diphosphate 2-C 98.6 1E-07 3.5E-12 92.9 8.7 84 251-351 106-191 (312)
124 2hnk_A SAM-dependent O-methylt 98.6 8.8E-08 3E-12 89.6 7.8 79 246-324 45-124 (239)
125 1fbn_A MJ fibrillarin homologu 98.6 9.6E-08 3.3E-12 89.0 8.0 85 257-356 70-154 (230)
126 3ocj_A Putative exported prote 98.6 1.2E-07 4E-12 92.1 8.8 111 258-408 115-227 (305)
127 2ar0_A M.ecoki, type I restric 98.6 1.1E-07 3.9E-12 100.5 9.4 107 240-360 148-276 (541)
128 3ldu_A Putative methylase; str 98.6 1.9E-07 6.5E-12 94.7 10.3 86 254-355 188-311 (385)
129 3ckk_A TRNA (guanine-N(7)-)-me 98.5 2.1E-07 7.3E-12 87.8 9.6 116 259-407 44-167 (235)
130 1ne2_A Hypothetical protein TA 98.5 1.3E-07 4.4E-12 85.8 7.7 73 258-355 48-120 (200)
131 3dtn_A Putative methyltransfer 98.5 2.8E-07 9.7E-12 85.1 10.0 113 252-408 34-148 (234)
132 2xvm_A Tellurite resistance pr 98.5 3.7E-07 1.3E-11 81.7 10.1 85 249-352 20-104 (199)
133 3gru_A Dimethyladenosine trans 98.5 3E-07 1E-11 90.2 10.2 88 250-357 39-126 (295)
134 3k0b_A Predicted N6-adenine-sp 98.5 2.8E-07 9.4E-12 93.9 10.3 87 253-355 193-317 (393)
135 3hem_A Cyclopropane-fatty-acyl 98.5 3.8E-07 1.3E-11 88.1 10.8 81 252-352 63-144 (302)
136 2xyq_A Putative 2'-O-methyl tr 98.5 8.4E-08 2.9E-12 94.0 6.1 103 257-406 59-169 (290)
137 3ldg_A Putative uncharacterize 98.5 3.2E-07 1.1E-11 93.1 10.6 87 254-356 187-311 (384)
138 3gnl_A Uncharacterized protein 98.5 3.3E-07 1.1E-11 87.7 9.5 66 259-325 19-85 (244)
139 3lec_A NADB-rossmann superfami 98.5 3.6E-07 1.2E-11 86.6 9.6 66 259-325 19-85 (230)
140 3f4k_A Putative methyltransfer 98.5 3.6E-07 1.2E-11 85.5 9.3 78 258-352 43-121 (257)
141 3kr9_A SAM-dependent methyltra 98.5 4.1E-07 1.4E-11 86.0 9.6 65 259-324 13-78 (225)
142 1jsx_A Glucose-inhibited divis 98.5 3.7E-07 1.3E-11 82.7 8.9 74 261-351 65-138 (207)
143 3ujc_A Phosphoethanolamine N-m 98.5 3E-07 1E-11 86.1 8.1 113 252-408 46-159 (266)
144 1ve3_A Hypothetical protein PH 98.5 6.6E-07 2.3E-11 81.8 10.2 76 260-354 37-112 (227)
145 2ih2_A Modification methylase 98.5 4.7E-08 1.6E-12 98.7 2.7 142 240-406 18-162 (421)
146 2pxx_A Uncharacterized protein 98.5 4.4E-07 1.5E-11 82.0 8.8 119 259-408 40-159 (215)
147 3mgg_A Methyltransferase; NYSG 98.5 6.2E-07 2.1E-11 85.0 10.2 84 253-352 29-112 (276)
148 3gu3_A Methyltransferase; alph 98.4 2.3E-07 8E-12 89.1 7.3 90 246-352 7-96 (284)
149 4fsd_A Arsenic methyltransfera 98.4 8.4E-07 2.9E-11 89.4 11.2 113 259-407 81-202 (383)
150 3bkx_A SAM-dependent methyltra 98.4 4.8E-07 1.6E-11 85.6 8.8 72 249-320 31-109 (275)
151 3dlc_A Putative S-adenosyl-L-m 98.4 5.8E-07 2E-11 81.3 8.9 83 252-352 35-118 (219)
152 3jwh_A HEN1; methyltransferase 98.4 5.1E-07 1.7E-11 82.7 8.6 118 252-410 20-143 (217)
153 2cx0_A Hypothetical protein AP 98.4 1.4E-07 4.8E-12 86.7 4.6 73 123-226 92-168 (187)
154 3bus_A REBM, methyltransferase 98.4 9.2E-07 3.1E-11 83.6 9.9 84 251-351 51-135 (273)
155 3tka_A Ribosomal RNA small sub 98.4 4.9E-07 1.7E-11 90.0 7.7 93 253-358 49-141 (347)
156 3jwg_A HEN1, methyltransferase 98.4 7.7E-07 2.6E-11 81.5 8.3 84 252-351 20-108 (219)
157 3tqs_A Ribosomal RNA small sub 98.4 1.1E-06 3.6E-11 84.5 9.6 100 241-357 8-108 (255)
158 1wg8_A Predicted S-adenosylmet 98.4 3.4E-07 1.2E-11 89.2 6.1 89 252-357 13-101 (285)
159 2vdw_A Vaccinia virus capping 98.4 2.3E-06 8E-11 83.7 12.0 117 260-409 47-170 (302)
160 3d2l_A SAM-dependent methyltra 98.4 2.3E-06 7.9E-11 79.0 11.2 104 260-407 32-136 (243)
161 3sm3_A SAM-dependent methyltra 98.3 1.4E-06 4.8E-11 79.8 9.6 108 259-408 28-141 (235)
162 3q87_B N6 adenine specific DNA 98.3 3.6E-07 1.2E-11 81.4 5.4 81 248-357 8-90 (170)
163 1iq8_A Archaeosine tRNA-guanin 98.3 5.4E-07 1.9E-11 96.0 7.7 74 122-227 506-579 (582)
164 2bm8_A Cephalosporin hydroxyla 98.3 2.2E-07 7.7E-12 87.6 3.8 87 252-354 72-161 (236)
165 3m70_A Tellurite resistance pr 98.3 1.1E-06 3.7E-11 84.0 8.7 79 255-353 114-192 (286)
166 3g5t_A Trans-aconitate 3-methy 98.3 1.7E-06 5.9E-11 83.4 10.0 84 259-351 34-119 (299)
167 3hnr_A Probable methyltransfer 98.3 1.1E-06 3.7E-11 80.3 8.1 105 255-407 39-144 (220)
168 3ofk_A Nodulation protein S; N 98.3 8.1E-07 2.8E-11 81.0 7.1 118 246-408 36-154 (216)
169 2o57_A Putative sarcosine dime 98.3 1.6E-06 5.4E-11 83.2 9.4 83 252-351 69-156 (297)
170 2fk8_A Methoxy mycolic acid sy 98.3 2.1E-06 7.3E-11 83.4 9.8 71 252-324 81-152 (318)
171 1kpg_A CFA synthase;, cyclopro 98.3 2.4E-06 8.1E-11 81.6 9.9 69 253-323 56-125 (287)
172 1wzn_A SAM-dependent methyltra 98.3 2.4E-06 8.2E-11 79.7 9.7 63 258-324 38-100 (252)
173 3uwp_A Histone-lysine N-methyl 98.3 1.7E-06 5.9E-11 88.6 9.2 73 253-326 165-246 (438)
174 2wa2_A Non-structural protein 98.3 1.5E-07 5.1E-12 91.4 1.3 73 259-354 80-157 (276)
175 2oxt_A Nucleoside-2'-O-methylt 98.3 1.3E-07 4.5E-12 91.2 0.7 74 258-354 71-149 (265)
176 1qam_A ERMC' methyltransferase 98.3 1.9E-06 6.5E-11 81.6 8.3 94 245-358 14-107 (244)
177 2nxc_A L11 mtase, ribosomal pr 98.3 2.6E-06 8.7E-11 81.0 9.2 83 251-353 108-192 (254)
178 1mjf_A Spermidine synthase; sp 98.2 1.7E-06 5.7E-11 83.7 7.9 78 260-355 74-162 (281)
179 3lkd_A Type I restriction-modi 98.2 2E-06 6.7E-11 91.1 9.0 108 240-359 196-311 (542)
180 1pjz_A Thiopurine S-methyltran 98.2 6.2E-07 2.1E-11 82.1 4.5 66 257-325 18-95 (203)
181 3v97_A Ribosomal RNA large sub 98.2 2.8E-06 9.7E-11 92.5 10.2 89 254-355 183-313 (703)
182 3bgv_A MRNA CAP guanine-N7 met 98.2 7.5E-06 2.6E-10 79.5 12.2 115 260-408 33-155 (313)
183 2kw5_A SLR1183 protein; struct 98.2 3.1E-06 1.1E-10 76.3 8.5 103 259-408 28-131 (202)
184 3mq2_A 16S rRNA methyltransfer 98.2 1.5E-06 5.2E-11 79.5 6.4 72 253-325 19-94 (218)
185 1yub_A Ermam, rRNA methyltrans 98.2 1.9E-07 6.4E-12 88.2 -0.1 97 243-359 11-107 (245)
186 4htf_A S-adenosylmethionine-de 98.2 4.8E-06 1.6E-10 79.5 9.7 75 261-352 68-143 (285)
187 2fyt_A Protein arginine N-meth 98.2 4E-06 1.4E-10 83.3 9.4 82 254-353 57-139 (340)
188 2yqz_A Hypothetical protein TT 98.2 3.4E-06 1.1E-10 78.8 8.4 75 258-351 36-110 (263)
189 3p2e_A 16S rRNA methylase; met 98.2 1.3E-06 4.5E-11 81.8 5.5 65 259-324 22-90 (225)
190 3fzg_A 16S rRNA methylase; met 98.2 3.2E-06 1.1E-10 78.2 7.9 60 260-322 48-108 (200)
191 2p35_A Trans-aconitate 2-methy 98.2 3.1E-06 1E-10 79.1 7.9 84 246-351 18-101 (259)
192 2ex4_A Adrenal gland protein A 98.2 1.9E-06 6.6E-11 80.2 6.5 76 260-352 78-153 (241)
193 3adn_A Spermidine synthase; am 98.2 2.3E-06 7.9E-11 83.6 7.3 81 260-355 82-167 (294)
194 2y1w_A Histone-arginine methyl 98.2 4.9E-06 1.7E-10 82.8 9.7 83 253-354 42-125 (348)
195 3iv6_A Putative Zn-dependent a 98.2 3.4E-06 1.2E-10 81.3 8.1 56 251-309 35-90 (261)
196 3ou2_A SAM-dependent methyltra 98.2 5.5E-06 1.9E-10 75.0 9.1 109 252-408 37-146 (218)
197 3g2m_A PCZA361.24; SAM-depende 98.2 3E-06 1E-10 81.7 7.7 111 254-408 76-190 (299)
198 1xj5_A Spermidine synthase 1; 98.2 4.8E-06 1.6E-10 82.9 9.2 82 259-354 118-203 (334)
199 1ri5_A MRNA capping enzyme; me 98.2 4.2E-06 1.4E-10 79.7 8.4 78 259-352 62-140 (298)
200 1y8c_A S-adenosylmethionine-de 98.1 5.9E-06 2E-10 76.1 9.0 71 261-351 37-107 (246)
201 3uzu_A Ribosomal RNA small sub 98.1 5.5E-06 1.9E-10 80.5 9.1 73 250-326 31-104 (279)
202 3htx_A HEN1; HEN1, small RNA m 98.1 4.9E-06 1.7E-10 91.5 9.4 73 253-325 713-791 (950)
203 3fut_A Dimethyladenosine trans 98.1 4.4E-06 1.5E-10 80.9 8.1 97 241-358 26-123 (271)
204 3r0q_C Probable protein argini 98.1 6.2E-06 2.1E-10 83.0 9.3 79 256-353 58-137 (376)
205 1u2z_A Histone-lysine N-methyl 98.1 5.2E-06 1.8E-10 85.5 8.9 68 254-322 235-311 (433)
206 3g07_A 7SK snRNA methylphospha 98.1 2.7E-06 9.1E-11 82.4 6.2 49 261-310 46-94 (292)
207 1iy9_A Spermidine synthase; ro 98.1 5.5E-06 1.9E-10 79.9 8.3 80 261-355 75-158 (275)
208 2o07_A Spermidine synthase; st 98.1 6E-06 2E-10 81.0 8.7 82 259-355 93-178 (304)
209 3q7e_A Protein arginine N-meth 98.1 6.3E-06 2.2E-10 82.1 8.9 78 259-354 64-142 (349)
210 3ccf_A Cyclopropane-fatty-acyl 98.1 3.4E-06 1.2E-10 80.3 6.5 65 252-324 48-112 (279)
211 2i7c_A Spermidine synthase; tr 98.1 6.1E-06 2.1E-10 79.9 8.3 82 259-355 76-161 (283)
212 3b3j_A Histone-arginine methyl 98.1 6.3E-06 2.1E-10 85.9 8.9 81 255-354 152-233 (480)
213 3m33_A Uncharacterized protein 98.1 7.5E-06 2.6E-10 75.7 8.4 73 259-352 46-118 (226)
214 3g5l_A Putative S-adenosylmeth 98.1 7.4E-06 2.5E-10 76.5 8.3 79 253-351 36-114 (253)
215 2gb4_A Thiopurine S-methyltran 98.1 6.6E-06 2.3E-10 78.4 8.0 78 257-351 64-158 (252)
216 1xtp_A LMAJ004091AAA; SGPP, st 98.1 6.4E-06 2.2E-10 76.6 7.8 79 254-351 86-164 (254)
217 3ftd_A Dimethyladenosine trans 98.1 6.2E-06 2.1E-10 78.7 7.4 90 249-358 19-108 (249)
218 2pt6_A Spermidine synthase; tr 98.1 5.3E-06 1.8E-10 82.0 7.1 80 260-354 115-198 (321)
219 3bwc_A Spermidine synthase; SA 98.1 1.2E-05 4.1E-10 78.6 9.6 83 259-355 93-179 (304)
220 1uir_A Polyamine aminopropyltr 98.0 9E-06 3.1E-10 79.9 8.4 81 260-355 76-161 (314)
221 3ege_A Putative methyltransfer 98.0 4.2E-06 1.4E-10 79.2 5.8 78 251-352 24-101 (261)
222 3bxo_A N,N-dimethyltransferase 98.0 1.8E-05 6.2E-10 72.7 9.9 102 260-408 39-141 (239)
223 2p8j_A S-adenosylmethionine-de 98.0 9.2E-06 3.2E-10 73.3 7.8 109 258-409 20-129 (209)
224 1g6q_1 HnRNP arginine N-methyl 98.0 8.7E-06 3E-10 80.3 8.2 80 257-354 34-114 (328)
225 3khk_A Type I restriction-modi 98.0 3.2E-06 1.1E-10 89.5 5.2 104 240-358 224-342 (544)
226 3bzb_A Uncharacterized protein 98.0 1.3E-05 4.4E-10 77.2 9.1 62 259-322 77-149 (281)
227 3bkw_A MLL3908 protein, S-aden 98.0 8.9E-06 3E-10 75.0 7.6 80 252-351 34-113 (243)
228 4azs_A Methyltransferase WBDD; 98.0 1.4E-05 4.7E-10 84.8 9.4 76 260-351 65-140 (569)
229 2b2c_A Spermidine synthase; be 98.0 8E-06 2.7E-10 80.6 6.8 80 260-354 107-190 (314)
230 3thr_A Glycine N-methyltransfe 98.0 5E-06 1.7E-10 79.4 5.2 122 252-407 48-174 (293)
231 3cgg_A SAM-dependent methyltra 98.0 1.4E-05 4.8E-10 70.6 7.6 72 259-353 44-115 (195)
232 3lcc_A Putative methyl chlorid 98.0 7.6E-06 2.6E-10 75.7 5.9 72 261-351 66-138 (235)
233 1x19_A CRTF-related protein; m 97.9 7.8E-05 2.7E-09 73.9 13.3 114 250-407 179-294 (359)
234 3h2b_A SAM-dependent methyltra 97.9 1.5E-05 5E-10 71.8 7.4 67 262-351 42-108 (203)
235 3i9f_A Putative type 11 methyl 97.9 1.1E-05 3.9E-10 70.5 6.3 58 255-320 11-68 (170)
236 3l8d_A Methyltransferase; stru 97.9 1.5E-05 5.1E-10 73.5 6.9 72 259-351 51-122 (242)
237 3e23_A Uncharacterized protein 97.9 2.1E-05 7.1E-10 71.4 7.8 69 258-351 40-108 (211)
238 3sso_A Methyltransferase; macr 97.9 1.7E-05 5.9E-10 81.0 7.8 108 261-414 216-330 (419)
239 2q07_A Uncharacterized protein 97.9 6.7E-06 2.3E-10 81.0 4.4 68 123-229 230-297 (306)
240 3ufb_A Type I restriction-modi 97.9 2.1E-05 7.2E-10 83.0 8.3 110 240-360 196-317 (530)
241 1qyr_A KSGA, high level kasuga 97.9 1.7E-05 5.8E-10 75.8 6.5 92 252-358 12-103 (252)
242 2p7i_A Hypothetical protein; p 97.9 1.6E-05 5.6E-10 73.0 6.1 59 259-324 40-98 (250)
243 3gjy_A Spermidine synthase; AP 97.8 1.5E-05 5.2E-10 78.9 6.1 80 263-356 91-170 (317)
244 3i53_A O-methyltransferase; CO 97.8 3.8E-05 1.3E-09 75.2 8.8 106 258-407 166-273 (332)
245 3gwz_A MMCR; methyltransferase 97.8 0.00013 4.6E-09 72.7 12.8 110 253-406 194-305 (369)
246 3pfg_A N-methyltransferase; N, 97.8 2.2E-05 7.4E-10 73.9 6.5 101 260-407 49-150 (263)
247 1qzz_A RDMB, aclacinomycin-10- 97.8 6.7E-05 2.3E-09 74.3 10.1 70 252-323 173-243 (374)
248 2r3s_A Uncharacterized protein 97.8 5.2E-05 1.8E-09 73.8 9.1 69 253-323 155-226 (335)
249 3e8s_A Putative SAM dependent 97.8 3.1E-05 1.1E-09 70.1 6.9 80 253-352 44-123 (227)
250 1p91_A Ribosomal RNA large sub 97.8 3.6E-05 1.2E-09 72.6 7.4 71 260-351 84-154 (269)
251 3dli_A Methyltransferase; PSI- 97.8 2.8E-05 9.5E-10 72.2 6.4 69 259-351 39-107 (240)
252 4hc4_A Protein arginine N-meth 97.8 4.3E-05 1.5E-09 77.3 8.1 62 260-324 82-144 (376)
253 4auk_A Ribosomal RNA large sub 97.8 1.9E-05 6.5E-10 79.7 5.5 78 259-361 209-286 (375)
254 2g72_A Phenylethanolamine N-me 97.8 4.4E-05 1.5E-09 73.1 7.9 46 260-307 70-115 (289)
255 1ixk_A Methyltransferase; open 97.8 4.1E-05 1.4E-09 75.2 7.5 71 13-107 14-84 (315)
256 1af7_A Chemotaxis receptor met 97.7 7.1E-05 2.4E-09 72.4 8.7 114 261-414 105-257 (274)
257 1tw3_A COMT, carminomycin 4-O- 97.7 9.7E-05 3.3E-09 72.9 9.6 70 252-323 174-244 (360)
258 4hg2_A Methyltransferase type 97.7 2E-05 6.7E-10 75.5 4.3 67 261-351 39-105 (257)
259 3frh_A 16S rRNA methylase; met 97.7 0.00011 3.9E-09 70.1 9.5 59 260-323 104-162 (253)
260 2gs9_A Hypothetical protein TT 97.7 4.9E-05 1.7E-09 68.8 6.6 66 261-351 36-101 (211)
261 3ggd_A SAM-dependent methyltra 97.7 9E-05 3.1E-09 68.7 8.5 64 257-326 52-115 (245)
262 2aot_A HMT, histamine N-methyl 97.7 4.7E-05 1.6E-09 73.2 6.8 65 259-323 50-122 (292)
263 2qfm_A Spermine synthase; sper 97.7 3.2E-05 1.1E-09 77.8 5.5 82 261-355 188-277 (364)
264 2qe6_A Uncharacterized protein 97.7 0.00037 1.3E-08 66.9 12.4 62 260-324 76-140 (274)
265 2avn_A Ubiquinone/menaquinone 97.6 0.00014 4.6E-09 68.5 7.8 67 261-351 54-120 (260)
266 2a14_A Indolethylamine N-methy 97.6 4.4E-05 1.5E-09 72.4 4.4 49 258-308 52-100 (263)
267 2px2_A Genome polyprotein [con 97.5 1.8E-05 6E-10 76.0 1.3 75 259-357 71-152 (269)
268 3cc8_A Putative methyltransfer 97.5 0.00012 4.2E-09 66.3 6.2 58 255-323 27-84 (230)
269 2cmg_A Spermidine synthase; tr 97.5 0.00011 3.7E-09 70.5 6.0 72 261-353 72-147 (262)
270 3lcv_B Sisomicin-gentamicin re 97.5 0.00014 4.8E-09 70.3 6.4 74 260-351 131-204 (281)
271 3mcz_A O-methyltransferase; ad 97.5 0.00027 9.2E-09 69.5 8.6 112 254-406 171-285 (352)
272 2i62_A Nicotinamide N-methyltr 97.4 7.2E-05 2.5E-09 69.8 4.0 50 258-309 53-102 (265)
273 2ip2_A Probable phenazine-spec 97.4 0.00023 7.8E-09 69.5 7.3 67 254-323 161-228 (334)
274 3cvo_A Methyltransferase-like 97.4 0.00079 2.7E-08 62.4 10.1 60 260-323 29-91 (202)
275 3giw_A Protein of unknown func 97.3 0.00015 5.1E-09 70.4 4.8 65 261-325 78-144 (277)
276 3s1s_A Restriction endonucleas 97.3 0.00019 6.6E-09 78.8 5.8 85 260-358 320-412 (878)
277 3dp7_A SAM-dependent methyltra 97.3 0.00055 1.9E-08 68.1 8.3 62 260-323 178-240 (363)
278 2frx_A Hypothetical protein YE 97.3 0.00014 4.9E-09 75.7 4.0 72 13-107 6-78 (479)
279 2oo3_A Protein involved in cat 97.2 8.8E-05 3E-09 72.2 1.6 81 261-357 91-171 (283)
280 3hp7_A Hemolysin, putative; st 97.2 0.00054 1.8E-08 66.9 7.3 79 261-358 85-164 (291)
281 2p38_A Protein involved in rib 97.1 0.00057 2E-08 61.4 6.1 62 123-225 95-156 (166)
282 3g7u_A Cytosine-specific methy 97.1 0.0011 3.7E-08 66.9 8.5 84 263-360 3-86 (376)
283 1vlm_A SAM-dependent methyltra 97.1 0.00053 1.8E-08 62.6 5.6 62 262-352 48-109 (219)
284 3u28_A H/ACA ribonucleoprotein 97.1 0.00068 2.3E-08 68.7 6.8 74 122-227 265-338 (400)
285 2qy6_A UPF0209 protein YFCK; s 97.1 0.0014 4.8E-08 62.7 8.5 85 259-353 58-181 (257)
286 3eld_A Methyltransferase; flav 97.1 0.00017 5.7E-09 70.5 2.0 37 259-296 79-115 (300)
287 4a6d_A Hydroxyindole O-methylt 97.0 0.0014 4.7E-08 65.1 8.5 110 253-406 171-281 (353)
288 1g55_A DNA cytosine methyltran 97.0 0.00072 2.5E-08 67.3 6.0 81 263-360 3-83 (343)
289 4e2x_A TCAB9; kijanose, tetron 97.0 0.00055 1.9E-08 69.0 5.0 50 253-305 99-148 (416)
290 3p8z_A Mtase, non-structural p 96.9 0.0002 6.7E-09 68.0 1.2 84 258-360 75-160 (267)
291 2zig_A TTHA0409, putative modi 96.9 0.0023 8E-08 62.0 8.4 60 260-322 234-293 (297)
292 3gcz_A Polyprotein; flavivirus 96.8 0.00027 9.3E-09 68.5 1.4 38 259-297 88-125 (282)
293 2c7p_A Modification methylase 96.8 0.0023 7.8E-08 63.3 8.1 76 262-360 11-86 (327)
294 3m6w_A RRNA methylase; rRNA me 96.8 0.001 3.6E-08 68.9 5.8 67 15-107 2-68 (464)
295 3evf_A RNA-directed RNA polyme 96.8 0.00035 1.2E-08 67.6 1.4 38 258-296 71-108 (277)
296 3opn_A Putative hemolysin; str 96.7 0.00093 3.2E-08 62.7 4.2 43 261-305 37-79 (232)
297 2zfu_A Nucleomethylin, cerebra 96.7 0.0009 3.1E-08 60.6 3.5 65 251-351 57-121 (215)
298 2j5v_A Glutamate 5-kinase; pro 96.6 0.0026 8.9E-08 64.0 6.5 63 122-216 274-337 (367)
299 2wk1_A NOVP; transferase, O-me 96.5 0.0044 1.5E-07 60.2 7.1 81 260-353 105-217 (282)
300 2py6_A Methyltransferase FKBM; 96.4 0.0084 2.9E-07 60.9 8.8 63 257-319 222-289 (409)
301 3lst_A CALO1 methyltransferase 96.3 0.0026 8.9E-08 62.6 4.6 66 253-322 176-242 (348)
302 3m4x_A NOL1/NOP2/SUN family pr 96.2 0.0059 2E-07 63.2 6.7 48 13-63 6-53 (456)
303 3lkz_A Non-structural protein 96.1 0.0051 1.7E-07 60.1 5.3 80 258-356 91-171 (321)
304 2qrv_A DNA (cytosine-5)-methyl 96.0 0.013 4.3E-07 57.2 7.6 84 260-360 14-98 (295)
305 1fp2_A Isoflavone O-methyltran 95.8 0.0089 3E-07 58.8 5.4 57 259-323 186-242 (352)
306 1i4w_A Mitochondrial replicati 95.7 0.015 5.2E-07 58.1 7.0 82 240-325 30-118 (353)
307 1sqw_A Saccharomyces cerevisia 95.7 0.015 5.2E-07 53.1 6.3 73 122-226 93-166 (188)
308 1fp1_D Isoliquiritigenin 2'-O- 95.7 0.012 4E-07 58.5 6.1 57 259-323 207-263 (372)
309 3c6k_A Spermine synthase; sper 95.7 0.02 6.7E-07 57.9 7.7 117 260-406 204-329 (381)
310 4h0n_A DNMT2; SAH binding, tra 95.7 0.014 4.8E-07 57.8 6.4 80 264-360 5-84 (333)
311 1g60_A Adenine-specific methyl 95.6 0.014 4.8E-07 55.3 5.9 50 259-311 210-259 (260)
312 3o4f_A Spermidine synthase; am 95.5 0.047 1.6E-06 53.3 9.3 85 255-355 78-167 (294)
313 4gqb_A Protein arginine N-meth 95.4 0.028 9.7E-07 60.3 8.0 62 262-324 358-423 (637)
314 2ld4_A Anamorsin; methyltransf 95.3 0.0054 1.9E-07 53.7 1.9 62 257-351 8-69 (176)
315 3ubt_Y Modification methylase 95.2 0.046 1.6E-06 53.0 8.4 76 263-360 1-76 (331)
316 2aus_C Pseudouridine synthase; 95.1 0.034 1.1E-06 55.2 6.9 74 122-227 249-322 (334)
317 3qv2_A 5-cytosine DNA methyltr 95.0 0.018 6.3E-07 56.9 4.8 79 262-358 10-89 (327)
318 3reo_A (ISO)eugenol O-methyltr 94.6 0.026 8.8E-07 56.1 4.5 57 259-323 201-257 (368)
319 1zg3_A Isoflavanone 4'-O-methy 94.6 0.034 1.2E-06 54.7 5.4 57 259-323 191-247 (358)
320 3p9c_A Caffeic acid O-methyltr 94.5 0.031 1.1E-06 55.4 4.9 61 255-323 194-255 (364)
321 2apo_A Probable tRNA pseudouri 94.5 0.06 2.1E-06 53.9 6.9 73 122-226 268-340 (357)
322 3r24_A NSP16, 2'-O-methyl tran 94.4 0.085 2.9E-06 51.6 7.5 103 258-406 106-215 (344)
323 3me5_A Cytosine-specific methy 93.8 0.11 3.8E-06 53.9 7.6 95 262-360 88-184 (482)
324 2b9e_A NOL1/NOP2/SUN domain fa 92.8 0.094 3.2E-06 51.2 4.9 26 42-67 8-33 (309)
325 3ua3_A Protein arginine N-meth 92.7 0.12 4E-06 56.2 5.8 64 262-326 410-486 (745)
326 2k4m_A TR8_protein, UPF0146 pr 92.3 0.078 2.7E-06 46.7 3.1 39 260-300 34-73 (153)
327 3ajd_A Putative methyltransfer 91.5 0.14 4.8E-06 48.5 4.2 38 45-105 10-47 (274)
328 4ft4_B DNA (cytosine-5)-methyl 90.9 1.5 5.3E-05 47.6 12.4 46 260-305 210-259 (784)
329 3swr_A DNA (cytosine-5)-methyl 90.9 0.75 2.6E-05 51.9 10.0 91 261-360 539-633 (1002)
330 1eg2_A Modification methylase 88.7 0.42 1.4E-05 46.7 5.1 49 259-310 240-291 (319)
331 1boo_A Protein (N-4 cytosine-s 88.1 0.35 1.2E-05 47.2 4.1 63 259-325 250-312 (323)
332 4dkj_A Cytosine-specific methy 87.6 0.4 1.4E-05 48.6 4.3 45 263-307 11-59 (403)
333 3av4_A DNA (cytosine-5)-methyl 87.5 1.2 4.2E-05 51.5 8.7 93 261-360 850-944 (1330)
334 2dph_A Formaldehyde dismutase; 85.1 1 3.5E-05 44.8 5.7 52 255-311 179-231 (398)
335 3s2e_A Zinc-containing alcohol 83.6 2.3 7.9E-05 41.0 7.4 53 255-313 160-213 (340)
336 1sqg_A SUN protein, FMU protei 82.9 0.3 1E-05 49.5 0.7 57 169-225 142-201 (429)
337 1kol_A Formaldehyde dehydrogen 81.8 2.2 7.6E-05 42.2 6.6 53 255-312 179-232 (398)
338 1pl8_A Human sorbitol dehydrog 80.5 2.4 8.3E-05 41.2 6.3 54 255-313 165-219 (356)
339 2yxl_A PH0851 protein, 450AA l 80.2 0.27 9.3E-06 50.2 -0.8 60 166-225 151-214 (450)
340 1f8f_A Benzyl alcohol dehydrog 79.4 2.6 9E-05 41.2 6.1 54 255-313 184-238 (371)
341 3fpc_A NADP-dependent alcohol 77.2 3.5 0.00012 40.0 6.2 54 254-312 159-213 (352)
342 1uuf_A YAHK, zinc-type alcohol 77.1 3.2 0.00011 40.8 6.0 51 257-313 190-241 (369)
343 1e3j_A NADP(H)-dependent ketos 76.5 3.4 0.00012 40.0 6.0 52 255-312 162-214 (352)
344 3two_A Mannitol dehydrogenase; 76.4 3.2 0.00011 40.2 5.7 54 255-314 170-224 (348)
345 4eez_A Alcohol dehydrogenase 1 76.2 3.9 0.00013 39.3 6.3 54 255-313 157-211 (348)
346 3jv7_A ADH-A; dehydrogenase, n 74.4 4.3 0.00015 39.1 6.1 51 258-313 168-219 (345)
347 1cdo_A Alcohol dehydrogenase; 72.9 4.4 0.00015 39.6 5.7 54 255-313 186-240 (374)
348 1xu9_A Corticosteroid 11-beta- 72.9 6.8 0.00023 36.5 6.9 62 262-324 28-90 (286)
349 3m6i_A L-arabinitol 4-dehydrog 72.1 4.9 0.00017 39.0 5.8 50 255-305 173-223 (363)
350 2jhf_A Alcohol dehydrogenase E 72.1 4.7 0.00016 39.4 5.7 54 255-313 185-239 (374)
351 2h6e_A ADH-4, D-arabinose 1-de 71.2 5.9 0.0002 38.2 6.2 51 258-313 168-219 (344)
352 1p0f_A NADP-dependent alcohol 71.0 4.6 0.00016 39.5 5.3 54 255-313 185-239 (373)
353 4ej6_A Putative zinc-binding d 70.9 7.2 0.00024 38.2 6.8 54 255-313 176-230 (370)
354 1e3i_A Alcohol dehydrogenase, 70.9 5.4 0.00018 39.0 5.8 54 255-313 189-243 (376)
355 2fzw_A Alcohol dehydrogenase c 70.7 4.9 0.00017 39.2 5.5 54 255-313 184-238 (373)
356 3rih_A Short chain dehydrogena 68.6 4.5 0.00015 38.4 4.5 80 244-324 15-103 (293)
357 1piw_A Hypothetical zinc-type 68.5 5.2 0.00018 38.9 5.1 52 256-313 174-226 (360)
358 3uog_A Alcohol dehydrogenase; 68.0 6.4 0.00022 38.3 5.7 52 256-313 184-236 (363)
359 1rjw_A ADH-HT, alcohol dehydro 67.8 11 0.00038 36.1 7.3 51 256-312 159-210 (339)
360 3uko_A Alcohol dehydrogenase c 67.3 4.5 0.00016 39.6 4.4 54 255-313 187-241 (378)
361 4a2c_A Galactitol-1-phosphate 65.8 10 0.00034 36.3 6.5 57 252-313 151-208 (346)
362 3gms_A Putative NADPH:quinone 63.0 6.3 0.00021 37.9 4.4 52 255-312 138-191 (340)
363 3goh_A Alcohol dehydrogenase, 59.4 8 0.00027 36.7 4.4 52 255-313 136-188 (315)
364 1wma_A Carbonyl reductase [NAD 59.1 18 0.00061 32.6 6.6 62 261-324 3-66 (276)
365 3ip1_A Alcohol dehydrogenase, 58.8 12 0.00041 36.9 5.8 50 258-312 210-260 (404)
366 1vj0_A Alcohol dehydrogenase, 57.9 13 0.00045 36.4 5.8 54 255-313 188-243 (380)
367 3i1j_A Oxidoreductase, short c 57.4 25 0.00085 31.5 7.3 60 261-321 13-73 (247)
368 2eih_A Alcohol dehydrogenase; 56.5 16 0.00056 35.0 6.1 50 257-312 162-213 (343)
369 1y1p_A ARII, aldehyde reductas 55.9 41 0.0014 31.2 8.8 62 261-323 10-73 (342)
370 1jvb_A NAD(H)-dependent alcoho 55.6 18 0.00061 34.8 6.3 53 255-312 164-218 (347)
371 2d8a_A PH0655, probable L-thre 55.6 13 0.00044 35.8 5.3 52 255-312 162-214 (348)
372 3o26_A Salutaridine reductase; 54.9 24 0.00082 32.5 6.9 63 261-324 11-74 (311)
373 1h2b_A Alcohol dehydrogenase; 54.5 19 0.00064 34.9 6.2 52 257-313 182-234 (359)
374 1pqw_A Polyketide synthase; ro 53.5 11 0.00039 32.7 4.1 50 256-312 33-85 (198)
375 1ja9_A 4HNR, 1,3,6,8-tetrahydr 53.1 27 0.00091 31.7 6.8 62 261-324 20-83 (274)
376 2hcy_A Alcohol dehydrogenase 1 52.8 16 0.00053 35.2 5.3 51 256-312 164-216 (347)
377 3awd_A GOX2181, putative polyo 52.5 34 0.0012 30.7 7.4 62 261-324 12-74 (260)
378 2zig_A TTHA0409, putative modi 51.5 9.6 0.00033 36.2 3.5 76 311-406 19-95 (297)
379 2dq4_A L-threonine 3-dehydroge 51.3 9 0.00031 36.8 3.3 47 256-304 160-207 (343)
380 3tjr_A Short chain dehydrogena 50.9 29 0.00099 32.6 6.8 62 261-324 30-92 (301)
381 4b7c_A Probable oxidoreductase 50.7 17 0.00057 34.7 5.1 53 255-312 143-197 (336)
382 3t8y_A CHEB, chemotaxis respon 50.5 22 0.00076 29.6 5.4 86 270-368 9-97 (164)
383 4fs3_A Enoyl-[acyl-carrier-pro 50.3 25 0.00084 32.3 6.0 64 261-324 5-70 (256)
384 3afn_B Carbonyl reductase; alp 50.0 22 0.00075 31.9 5.6 62 261-324 6-69 (258)
385 3nzo_A UDP-N-acetylglucosamine 49.7 33 0.0011 33.7 7.2 62 262-324 35-101 (399)
386 3b5i_A S-adenosyl-L-methionine 49.4 33 0.0011 34.0 7.2 44 262-305 53-110 (374)
387 2j3h_A NADP-dependent oxidored 49.4 17 0.00059 34.6 5.0 53 255-312 149-203 (345)
388 2c0c_A Zinc binding alcohol de 48.7 32 0.0011 33.3 6.9 52 255-312 157-210 (362)
389 3to5_A CHEY homolog; alpha(5)b 48.4 19 0.00065 30.1 4.5 74 282-369 8-84 (134)
390 2ph3_A 3-oxoacyl-[acyl carrier 48.1 49 0.0017 29.3 7.6 59 264-324 3-64 (245)
391 3pvc_A TRNA 5-methylaminomethy 47.7 12 0.0004 40.0 3.7 85 260-354 57-180 (689)
392 2ae2_A Protein (tropinone redu 47.6 44 0.0015 30.3 7.3 62 261-324 8-70 (260)
393 2uvd_A 3-oxoacyl-(acyl-carrier 47.5 37 0.0013 30.5 6.7 61 262-324 4-66 (246)
394 3e9n_A Putative short-chain de 47.3 50 0.0017 29.5 7.6 80 262-354 5-84 (245)
395 2bd0_A Sepiapterin reductase; 46.5 23 0.00078 31.6 5.1 59 264-324 4-70 (244)
396 3ai3_A NADPH-sorbose reductase 46.1 33 0.0011 31.2 6.2 61 262-324 7-69 (263)
397 3jyn_A Quinone oxidoreductase; 46.0 21 0.00073 33.9 5.0 51 256-312 135-187 (325)
398 1v3u_A Leukotriene B4 12- hydr 46.0 24 0.00084 33.4 5.4 52 255-312 139-192 (333)
399 3heb_A Response regulator rece 45.4 36 0.0012 27.5 5.8 79 286-368 4-85 (152)
400 3snk_A Response regulator CHEY 45.3 62 0.0021 25.4 7.1 68 286-368 14-85 (135)
401 3pk0_A Short-chain dehydrogena 45.2 42 0.0014 30.7 6.8 64 261-325 9-73 (262)
402 1zem_A Xylitol dehydrogenase; 45.1 35 0.0012 31.1 6.2 62 261-324 6-68 (262)
403 3qwb_A Probable quinone oxidor 45.0 24 0.00081 33.6 5.2 50 257-312 144-195 (334)
404 3ioy_A Short-chain dehydrogena 44.9 29 0.00099 33.0 5.8 63 261-324 7-71 (319)
405 1fmc_A 7 alpha-hydroxysteroid 44.7 50 0.0017 29.4 7.1 62 261-324 10-72 (255)
406 4fn4_A Short chain dehydrogena 44.1 50 0.0017 30.7 7.2 62 262-325 7-69 (254)
407 1yb1_A 17-beta-hydroxysteroid 44.0 31 0.0011 31.7 5.7 62 261-324 30-92 (272)
408 3ic5_A Putative saccharopine d 44.0 39 0.0013 26.0 5.6 54 261-323 4-59 (118)
409 2pd6_A Estradiol 17-beta-dehyd 43.8 21 0.00073 32.2 4.5 62 262-324 7-75 (264)
410 4dvj_A Putative zinc-dependent 43.7 24 0.00083 34.2 5.1 53 256-313 161-220 (363)
411 2qvg_A Two component response 43.4 31 0.0011 27.4 5.0 75 285-367 6-84 (143)
412 3llv_A Exopolyphosphatase-rela 42.7 28 0.00095 28.4 4.6 54 262-324 6-60 (141)
413 4eye_A Probable oxidoreductase 42.6 24 0.00081 33.9 4.8 53 255-313 153-207 (342)
414 1xg5_A ARPG836; short chain de 42.5 46 0.0016 30.5 6.6 62 262-324 32-95 (279)
415 2cf5_A Atccad5, CAD, cinnamyl 42.5 30 0.001 33.4 5.5 53 256-313 174-228 (357)
416 1mxh_A Pteridine reductase 2; 42.3 58 0.002 29.7 7.3 61 262-324 11-74 (276)
417 2jah_A Clavulanic acid dehydro 42.3 35 0.0012 30.8 5.7 61 262-324 7-68 (247)
418 1wly_A CAAR, 2-haloacrylate re 41.8 42 0.0015 31.8 6.4 51 256-312 140-192 (333)
419 4dup_A Quinone oxidoreductase; 41.8 24 0.00082 34.0 4.7 50 256-312 162-214 (353)
420 3lyl_A 3-oxoacyl-(acyl-carrier 41.7 48 0.0016 29.6 6.5 61 262-324 5-66 (247)
421 3oj0_A Glutr, glutamyl-tRNA re 41.5 40 0.0014 27.8 5.5 51 252-304 11-62 (144)
422 3gl9_A Response regulator; bet 41.5 54 0.0019 25.4 6.1 67 287-368 3-72 (122)
423 2rhc_B Actinorhodin polyketide 41.3 36 0.0012 31.4 5.7 62 261-324 21-83 (277)
424 1iz0_A Quinone oxidoreductase; 41.2 22 0.00075 33.3 4.2 49 259-313 123-173 (302)
425 1xq1_A Putative tropinone redu 41.2 66 0.0023 28.9 7.4 61 262-324 14-75 (266)
426 3eul_A Possible nitrate/nitrit 41.1 31 0.001 28.0 4.7 70 285-367 14-86 (152)
427 3o38_A Short chain dehydrogena 41.1 55 0.0019 29.6 6.9 63 261-324 21-85 (266)
428 3h2s_A Putative NADH-flavin re 40.8 58 0.002 28.2 6.8 98 268-406 5-103 (224)
429 4dry_A 3-oxoacyl-[acyl-carrier 40.5 48 0.0016 30.7 6.5 64 261-325 32-96 (281)
430 3eod_A Protein HNR; response r 40.4 62 0.0021 25.1 6.3 67 286-367 7-76 (130)
431 1geg_A Acetoin reductase; SDR 40.3 39 0.0013 30.6 5.7 59 264-324 4-63 (256)
432 1vl8_A Gluconate 5-dehydrogena 40.2 52 0.0018 30.1 6.6 62 261-324 20-83 (267)
433 3fwz_A Inner membrane protein 39.8 22 0.00075 29.3 3.6 53 263-324 8-61 (140)
434 3lf2_A Short chain oxidoreduct 39.5 66 0.0023 29.3 7.2 62 262-324 8-71 (265)
435 1yb5_A Quinone oxidoreductase; 39.3 36 0.0012 32.8 5.5 51 256-312 165-217 (351)
436 3pgx_A Carveol dehydrogenase; 39.2 69 0.0024 29.3 7.3 62 261-324 14-89 (280)
437 4g65_A TRK system potassium up 39.2 32 0.0011 34.9 5.3 55 263-325 4-59 (461)
438 2gn4_A FLAA1 protein, UDP-GLCN 39.1 25 0.00087 33.7 4.3 60 261-324 20-82 (344)
439 3tfo_A Putative 3-oxoacyl-(acy 39.0 51 0.0017 30.4 6.3 61 262-324 4-65 (264)
440 2pnf_A 3-oxoacyl-[acyl-carrier 38.8 64 0.0022 28.5 6.8 61 262-324 7-69 (248)
441 3qiv_A Short-chain dehydrogena 38.7 70 0.0024 28.6 7.1 62 261-324 8-70 (253)
442 3h7a_A Short chain dehydrogena 38.7 48 0.0017 30.1 6.1 61 262-324 7-68 (252)
443 1yqd_A Sinapyl alcohol dehydro 38.4 42 0.0014 32.4 5.9 52 256-312 181-234 (366)
444 1k68_A Phytochrome response re 38.2 72 0.0025 24.7 6.4 76 287-368 3-81 (140)
445 3rkr_A Short chain oxidoreduct 38.2 71 0.0024 28.9 7.1 62 261-324 28-90 (262)
446 3l77_A Short-chain alcohol deh 38.1 50 0.0017 29.2 5.9 61 263-325 3-65 (235)
447 1edo_A Beta-keto acyl carrier 38.1 81 0.0028 27.8 7.4 59 264-324 3-63 (244)
448 1yxm_A Pecra, peroxisomal tran 37.8 80 0.0027 29.1 7.5 63 261-324 17-84 (303)
449 3kht_A Response regulator; PSI 37.7 1.1E+02 0.0037 24.1 7.5 69 286-367 5-76 (144)
450 2yut_A Putative short-chain ox 37.4 38 0.0013 29.1 4.9 50 268-324 5-54 (207)
451 3ps9_A TRNA 5-methylaminomethy 37.3 31 0.0011 36.4 5.0 93 260-370 65-196 (676)
452 2qq5_A DHRS1, dehydrogenase/re 36.7 60 0.0021 29.3 6.4 61 262-324 5-66 (260)
453 3pxx_A Carveol dehydrogenase; 36.6 84 0.0029 28.6 7.4 62 261-324 9-83 (287)
454 1xkq_A Short-chain reductase f 36.6 54 0.0018 30.1 6.1 62 262-324 6-70 (280)
455 2zat_A Dehydrogenase/reductase 36.5 49 0.0017 29.9 5.7 62 261-324 13-75 (260)
456 1w6u_A 2,4-dienoyl-COA reducta 36.1 39 0.0013 31.2 5.1 61 262-324 26-88 (302)
457 3lua_A Response regulator rece 35.4 86 0.0029 24.6 6.5 66 286-366 4-75 (140)
458 2cdc_A Glucose dehydrogenase g 35.2 30 0.001 33.4 4.2 49 256-312 166-229 (366)
459 3svt_A Short-chain type dehydr 35.2 73 0.0025 29.2 6.8 63 261-324 10-75 (281)
460 1lnq_A MTHK channels, potassiu 35.1 36 0.0012 32.4 4.7 53 263-325 116-168 (336)
461 2hq1_A Glucose/ribitol dehydro 35.0 63 0.0021 28.6 6.1 61 262-324 5-67 (247)
462 1xhl_A Short-chain dehydrogena 34.9 69 0.0024 29.9 6.6 63 261-324 25-90 (297)
463 3sju_A Keto reductase; short-c 34.8 55 0.0019 30.2 5.8 61 262-324 24-85 (279)
464 2c07_A 3-oxoacyl-(acyl-carrier 34.3 70 0.0024 29.4 6.5 61 262-324 44-105 (285)
465 3nyw_A Putative oxidoreductase 34.0 75 0.0026 28.7 6.6 62 262-324 7-71 (250)
466 1qor_A Quinone oxidoreductase; 33.9 39 0.0013 31.9 4.7 50 256-312 135-187 (327)
467 3gaf_A 7-alpha-hydroxysteroid 33.8 61 0.0021 29.4 5.9 62 261-324 11-73 (256)
468 2j8z_A Quinone oxidoreductase; 33.8 39 0.0013 32.5 4.7 50 256-312 157-209 (354)
469 2qhx_A Pteridine reductase 1; 33.7 88 0.003 29.7 7.2 62 261-324 45-109 (328)
470 4fc7_A Peroxisomal 2,4-dienoyl 33.7 75 0.0026 29.2 6.5 63 261-324 26-89 (277)
471 3dqp_A Oxidoreductase YLBE; al 33.2 74 0.0025 27.7 6.2 50 264-323 2-52 (219)
472 1k66_A Phytochrome response re 32.9 74 0.0025 25.0 5.7 78 286-368 6-88 (149)
473 1yo6_A Putative carbonyl reduc 32.7 42 0.0014 29.7 4.4 58 262-324 3-63 (250)
474 3iup_A Putative NADPH:quinone 32.6 22 0.00076 34.7 2.8 48 260-313 169-219 (379)
475 3rku_A Oxidoreductase YMR226C; 32.5 54 0.0018 30.6 5.4 87 261-353 32-123 (287)
476 1i3c_A Response regulator RCP1 32.3 94 0.0032 24.9 6.3 77 286-368 8-87 (149)
477 3f1l_A Uncharacterized oxidore 32.3 75 0.0025 28.7 6.2 60 261-321 11-71 (252)
478 3fbg_A Putative arginate lyase 32.2 59 0.002 31.0 5.8 52 256-313 139-198 (346)
479 1boo_A Protein (N-4 cytosine-s 32.2 54 0.0019 31.4 5.5 69 312-406 13-82 (323)
480 1ae1_A Tropinone reductase-I; 32.2 77 0.0026 28.9 6.4 62 261-324 20-82 (273)
481 3f9i_A 3-oxoacyl-[acyl-carrier 31.9 94 0.0032 27.6 6.8 82 261-356 13-95 (249)
482 3vyw_A MNMC2; tRNA wobble urid 31.6 70 0.0024 31.0 6.1 81 260-353 95-194 (308)
483 3e8x_A Putative NAD-dependent 31.6 44 0.0015 29.6 4.4 54 261-322 20-75 (236)
484 2aef_A Calcium-gated potassium 31.5 60 0.002 29.0 5.3 53 262-324 9-61 (234)
485 3gt7_A Sensor protein; structu 31.4 76 0.0026 25.7 5.6 68 286-368 7-77 (154)
486 1oaa_A Sepiapterin reductase; 31.3 1.2E+02 0.0042 27.1 7.6 62 262-324 6-72 (259)
487 2bgk_A Rhizome secoisolaricire 31.2 68 0.0023 29.0 5.7 61 261-324 15-76 (278)
488 3ucx_A Short chain dehydrogena 31.2 1.3E+02 0.0043 27.3 7.6 62 261-324 10-72 (264)
489 2b5w_A Glucose dehydrogenase; 30.6 45 0.0015 32.0 4.6 54 255-313 160-225 (357)
490 1gu7_A Enoyl-[acyl-carrier-pro 30.6 49 0.0017 31.7 4.9 55 257-313 162-219 (364)
491 2ehd_A Oxidoreductase, oxidore 30.6 51 0.0018 29.1 4.7 57 262-324 5-62 (234)
492 3cxt_A Dehydrogenase with diff 30.6 76 0.0026 29.5 6.1 62 261-324 33-95 (291)
493 3krt_A Crotonyl COA reductase; 30.6 39 0.0013 33.9 4.2 51 257-313 224-276 (456)
494 2wsb_A Galactitol dehydrogenas 30.6 78 0.0027 28.1 6.0 59 261-324 10-70 (254)
495 4g65_A TRK system potassium up 30.5 61 0.0021 32.8 5.7 58 261-325 234-291 (461)
496 4iin_A 3-ketoacyl-acyl carrier 30.5 1.3E+02 0.0043 27.4 7.5 62 261-324 28-91 (271)
497 3n0r_A Response regulator; sig 30.4 76 0.0026 29.6 6.0 69 286-368 160-232 (286)
498 2b4q_A Rhamnolipids biosynthes 30.3 47 0.0016 30.7 4.5 61 261-324 28-89 (276)
499 4g81_D Putative hexonate dehyd 30.3 77 0.0026 29.4 6.0 61 262-324 9-70 (255)
500 1gee_A Glucose 1-dehydrogenase 30.2 90 0.0031 27.9 6.4 61 262-324 7-69 (261)
No 1
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=1.4e-36 Score=306.87 Aligned_cols=159 Identities=23% Similarity=0.187 Sum_probs=138.5
Q ss_pred cccCCCCccc--cccceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHH
Q 014571 228 RIFQLPSFYD--VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKL 305 (422)
Q Consensus 228 ~~~~~p~~~~--~~~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~ 305 (422)
++.++|.|.. +.-+.||+||.+||+++.+|+|+||++||||||||||||+|||+++. .+.|+|+|++++|++.+++|
T Consensus 113 ~~~~~p~~~~g~~~vqd~~iQd~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~ 191 (359)
T 4fzv_A 113 DISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKI 191 (359)
T ss_dssp CCCCCCCCCBCTTSSBSEEEECGGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHH
T ss_pred ChhcCCCcccCceeccchhhhCHHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHH
Confidence 4456666642 24567999999999999999999999999999999999999999864 58999999999999999999
Q ss_pred HHHhCC------cceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCcccc--CchhhhhhCCCCCcccccc
Q 014571 306 AAEMGL------KCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK--EVPSIAAEGLNGDKSCKEK 377 (422)
Q Consensus 306 l~r~g~------~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~--G~l~~lrr~p~~~~~w~~~ 377 (422)
++++|. .++.+...|++++... ..+.||+||+||||||+ |+ +|++|+.+++|++.
T Consensus 192 l~r~~~~~~~~~~~v~v~~~D~~~~~~~--------------~~~~fD~VLlDaPCSg~g~g~---~r~~~~~~~~~~~~ 254 (359)
T 4fzv_A 192 LHSYVPEEIRDGNQVRVTSWDGRKWGEL--------------EGDTYDRVLVDVPCTTDRHSL---HEEENNIFKRSRKK 254 (359)
T ss_dssp HHHHSCTTTTTSSSEEEECCCGGGHHHH--------------STTCEEEEEEECCCCCHHHHT---TCCTTCTTSGGGHH
T ss_pred HHHhhhhhhccCCceEEEeCchhhcchh--------------ccccCCEEEECCccCCCCCcc---cccChhhhhhCCHH
Confidence 999986 4689999999987532 13579999999999998 66 89999999999887
Q ss_pred CcccchhHHHHHHHHHHhcc-ceeccEEEe
Q 014571 378 GRTCGECGMAQEEINALVVG-LRIQKVLVL 406 (422)
Q Consensus 378 ~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~ 406 (422)
.. ..++.+|++||++|+. +|.||.|||
T Consensus 255 ~~--~~l~~lQ~~iL~~a~~~lkpGG~LVY 282 (359)
T 4fzv_A 255 ER--QILPVLQVQLLAAGLLATKPGGHVVY 282 (359)
T ss_dssp HH--HTHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred HH--HHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 65 5899999999999987 799999999
No 2
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=8.6e-35 Score=304.32 Aligned_cols=217 Identities=19% Similarity=0.155 Sum_probs=182.6
Q ss_pred ccCCCCchhhhhhhcccCC---CCCCCcccCCCceEEEEccCccCHHHHhc--ccCcceeeccc----------------
Q 014571 169 PTLDGGWGLGITRGTVLQG---SQTDPYYFERSGLYIGQGTAMMSRAGIFR--ASEGIAVDMHN---------------- 227 (422)
Q Consensus 169 ~~~~p~W~~~~~r~~~~~~---~~~~~~~~~~~~v~Vrvg~a~msreel~~--~~~GiaV~~~~---------------- 227 (422)
.+++|.|+++.++..+... ..+.+++++++++++|+|+.+++++++.+ ...|+.++...
T Consensus 5 ~~~~P~~~~~~~~~~~g~~~~~~~~~~a~~~~~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (479)
T 2frx_A 5 TVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPYGWTLTPIPWCEEGFWIERDNEDAL 84 (479)
T ss_dssp --CCCHHHHHHHGGGCC----CHHHHHHHTSCCCCCEEECTTTCCHHHHHHHHGGGCCCCCEETTEEEEEC---------
T ss_pred cccCcHHHHHHHHHHcCccHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHcCCceeecCCCCceEEEecCccccc
Confidence 4689999999998877533 23567788999999999999999998875 23444332211
Q ss_pred cccCCCCccccccceEEEeChhHHHHHHhcCCC--CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHH
Q 014571 228 RIFQLPSFYDVLEGEIFLQNLPSIVTAHALDPQ--KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKL 305 (422)
Q Consensus 228 ~~~~~p~~~~~~~G~~~~Qd~~S~lv~~~L~p~--pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~ 305 (422)
++..+|. |.+|.+|+||.+||+++.+|+++ +|++|||+|||||+||+++|+++++.|.|+|+|+++.|++.+++|
T Consensus 85 ~~~~~~~---~~~G~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n 161 (479)
T 2frx_A 85 PLGSTAE---HLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHAN 161 (479)
T ss_dssp CGGGSHH---HHTTSEEECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHH
T ss_pred CcccChH---HhCcEEEEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH
Confidence 2333444 47999999999999999999999 999999999999999999999998889999999999999999999
Q ss_pred HHHhCCcceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhH
Q 014571 306 AAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECG 385 (422)
Q Consensus 306 l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~ 385 (422)
++++|+.||.++++|++.+... ..+.||+|++||||||.|+ +|++|+..+.|++... ..++
T Consensus 162 ~~r~g~~nv~~~~~D~~~~~~~--------------~~~~fD~Il~D~PcSg~G~---~~~~pd~~~~~~~~~~--~~l~ 222 (479)
T 2frx_A 162 ISRCGISNVALTHFDGRVFGAA--------------VPEMFDAILLDAPCSGEGV---VRKDPDALKNWSPESN--QEIA 222 (479)
T ss_dssp HHHHTCCSEEEECCCSTTHHHH--------------STTCEEEEEEECCCCCGGG---GGTCTTSSSSCCHHHH--HHHH
T ss_pred HHHcCCCcEEEEeCCHHHhhhh--------------ccccCCEEEECCCcCCccc---ccCCHHHHhhcCHhHH--HHHH
Confidence 9999999999999999876421 1346999999999999999 9999999999998765 5899
Q ss_pred HHHHHHHHHhcc-ceeccEEEeh
Q 014571 386 MAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 386 ~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
.+|++||+++.. |+.+|.||++
T Consensus 223 ~~q~~iL~~a~~~LkpGG~Lvys 245 (479)
T 2frx_A 223 ATQRELIDSAFHALRPGGTLVYS 245 (479)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCEEEEe
Confidence 999999999977 8999999993
No 3
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=8.4e-35 Score=302.88 Aligned_cols=212 Identities=19% Similarity=0.164 Sum_probs=182.9
Q ss_pred CCCchhhhhhhcccCC-CCCCCcccCC-CceEEEEccCccCHHHHhc-----------ccCcceeeccccccCCCCcccc
Q 014571 172 DGGWGLGITRGTVLQG-SQTDPYYFER-SGLYIGQGTAMMSRAGIFR-----------ASEGIAVDMHNRIFQLPSFYDV 238 (422)
Q Consensus 172 ~p~W~~~~~r~~~~~~-~~~~~~~~~~-~~v~Vrvg~a~msreel~~-----------~~~GiaV~~~~~~~~~p~~~~~ 238 (422)
+|.|+++.++..+... ..+.+++|++ ++++||+|+.+++++++.+ .+.|+.+.....+..+|.|
T Consensus 2 lP~w~~~~~~~~~g~e~~~~l~a~~~~~~~~~lRvN~lk~~~~~~~~~l~~~~~~~~~~~~g~~l~~~~~~~~~~~~--- 78 (464)
T 3m6w_A 2 LPKAFLSRMAELLGEEFPAFLKALTEGKRTYGLRVNTLKLPPEAFQRISPWPLRPIPWCQEGFYYPEEARPGPHPFF--- 78 (464)
T ss_dssp CCHHHHHHHHHHHGGGHHHHHHHHHTSCCCCEEEECTTTCCHHHHHHHCSSCCEEETTEEEEEECCTTCCCSSSHHH---
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCCCHHHHHHHcCCCceecCCCCceEEECCCCCcccChHH---
Confidence 6899999888877533 3466788898 9999999999999998754 2345544433334455555
Q ss_pred ccceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEe
Q 014571 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318 (422)
Q Consensus 239 ~~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~ 318 (422)
.+|.+++||.+||+++.+|++++|++|||+|||||+||+++|+++++.|+|+|+|+++.|++.+++|++++|+. |.+++
T Consensus 79 ~~G~~~vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~ 157 (464)
T 3m6w_A 79 YAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQ 157 (464)
T ss_dssp HTTSEEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEEC
T ss_pred hCCeEEEECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEE
Confidence 79999999999999999999999999999999999999999999988899999999999999999999999998 99999
Q ss_pred cchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-
Q 014571 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG- 397 (422)
Q Consensus 319 ~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~- 397 (422)
+|++.+.... .+.||+|++||||||.|+ +|++|+..+.|++... ..++.+|++||+++..
T Consensus 158 ~Da~~l~~~~--------------~~~FD~Il~D~PcSg~G~---~rr~pd~~~~~~~~~~--~~l~~~Q~~iL~~a~~~ 218 (464)
T 3m6w_A 158 APPRALAEAF--------------GTYFHRVLLDAPCSGEGM---FRKDREAARHWGPSAP--KRMAEVQKALLAQASRL 218 (464)
T ss_dssp SCHHHHHHHH--------------CSCEEEEEEECCCCCGGG---TTTCTTSGGGCCTTHH--HHHHHHHHHHHHHHHTT
T ss_pred CCHHHhhhhc--------------cccCCEEEECCCcCCccc---cccChHHhhhcCHHHH--HHHHHHHHHHHHHHHHh
Confidence 9998865211 356999999999999999 9999999999988765 6899999999999987
Q ss_pred ceeccEEEe
Q 014571 398 LRIQKVLVL 406 (422)
Q Consensus 398 lr~~~~~~~ 406 (422)
|+.+|.||+
T Consensus 219 LkpGG~Lvy 227 (464)
T 3m6w_A 219 LGPGGVLVY 227 (464)
T ss_dssp EEEEEEEEE
T ss_pred cCCCcEEEE
Confidence 799999998
No 4
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=4.5e-33 Score=288.83 Aligned_cols=231 Identities=24% Similarity=0.298 Sum_probs=190.6
Q ss_pred cccCHHHHHHHHHHhchhhHHHHHHHhc-CCCCccEEEeecCCCCHHHHHHHHHHHHHhcCCCCcccccccccccCCCcc
Q 014571 13 LRWNPQVEEYFIRAYGADHFSRISKALT-RPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTI 91 (422)
Q Consensus 13 ~~~~~~v~~~l~~~~~~~~~~~~~~~l~-~pp~~~~~Rvnt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (422)
.++++.+.+.+.+.|| +.++++++++. .||. .++||||+|++++++++.|.+. | +
T Consensus 155 ~~~P~w~~~~~~~~~g-~~~~~~~~a~~~~~~~-~~~Rvn~~k~~~~~~~~~L~~~---------g-------------~ 210 (450)
T 2yxl_A 155 YLAPSWLIERVKGILG-DETEDFFRSVNKRHEW-ISIRVNTLKANVEEVIGELEED---------G-------------V 210 (450)
T ss_dssp HTSCHHHHHHHHHHHG-GGHHHHHHHHHCCCCE-EEEEECTTTCCHHHHHHHHHHT---------T-------------C
T ss_pred hcCcHHHHHHHHHHhh-HHHHHHHHhcCCCCCC-EEEEEcCCCCCHHHHHHHHHhC---------C-------------c
Confidence 3578889999999999 77999999999 7775 5999999999999999988754 3 2
Q ss_pred ccccCCCCCcEEEEeCCCCcccCCCCCCCCCCCEEEEccccHHHHHcCCccccCceeeccCCccCCCEEEEeeccccccC
Q 014571 92 SESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTL 171 (422)
Q Consensus 92 ~~~~~~~l~~~l~~~~~gp~~~~~~~~~~~~~k~ViVd~~~~eaVlrGA~v~~PGil~~~~~~~~gd~V~v~~~l~~~~~ 171 (422)
...++|.+++.+.++..
T Consensus 211 ~~~~~~~~~~~~~~~~~--------------------------------------------------------------- 227 (450)
T 2yxl_A 211 EVVRSERVPTILKIKGP--------------------------------------------------------------- 227 (450)
T ss_dssp CEEECSSCTTEEEEESC---------------------------------------------------------------
T ss_pred cceecCccCceEEeCCC---------------------------------------------------------------
Confidence 22334444444333200
Q ss_pred CCCchhhhhhhcccCCCCCCCcccCCCceEEEEccCccCHHHHhcccCcceeeccccccCCCCccccccceEEEeChhHH
Q 014571 172 DGGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSI 251 (422)
Q Consensus 172 ~p~W~~~~~r~~~~~~~~~~~~~~~~~~v~Vrvg~a~msreel~~~~~GiaV~~~~~~~~~p~~~~~~~G~~~~Qd~~S~ 251 (422)
.++..+|.| .+|.+++||.+||
T Consensus 228 -------------------------------------------------------~~~~~~~~~---~~G~~~~qd~~s~ 249 (450)
T 2yxl_A 228 -------------------------------------------------------YNFDTSSAF---NEGKIIVQEEASA 249 (450)
T ss_dssp -------------------------------------------------------CCTTSCHHH---HTTSEEECCHHHH
T ss_pred -------------------------------------------------------CCcccCchh---hCceEEecCchhH
Confidence 011123333 5899999999999
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCC
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNES 331 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~ 331 (422)
+++.++++++|++|||+|||||+||+++++.+++.++|+|+|+++.+++.+++|++++|++++.++++|+.......
T Consensus 250 l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~--- 326 (450)
T 2yxl_A 250 VASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEII--- 326 (450)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSS---
T ss_pred HHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhh---
Confidence 99999999999999999999999999999999777999999999999999999999999999999999987643110
Q ss_pred CCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEe
Q 014571 332 NDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVL 406 (422)
Q Consensus 332 ~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~ 406 (422)
..+.||.|++||||||.|+ ++++|+..|.|++... ..++.+|.+||+++.. ++.+|.+++
T Consensus 327 ----------~~~~fD~Vl~D~Pcsg~g~---~~~~pd~~~~~~~~~~--~~l~~~q~~iL~~a~~~LkpGG~lvy 387 (450)
T 2yxl_A 327 ----------GEEVADKVLLDAPCTSSGT---IGKNPELRWRLREDKI--NEMSQLQRELLESAARLVKPGGRLLY 387 (450)
T ss_dssp ----------CSSCEEEEEEECCCCCGGG---TTTSTTHHHHCCTTSH--HHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ----------ccCCCCEEEEcCCCCCCee---eccChhhhhhCCHHHH--HHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 1256999999999999999 9999999888887655 6899999999999987 799999998
No 5
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=7.3e-35 Score=302.84 Aligned_cols=210 Identities=18% Similarity=0.139 Sum_probs=178.0
Q ss_pred cCCCCchhhhhhhcccCC-CCCCCcccCCCc-eEEEEccCccCHHHHhc--------------ccCcceeeccccccCCC
Q 014571 170 TLDGGWGLGITRGTVLQG-SQTDPYYFERSG-LYIGQGTAMMSRAGIFR--------------ASEGIAVDMHNRIFQLP 233 (422)
Q Consensus 170 ~~~p~W~~~~~r~~~~~~-~~~~~~~~~~~~-v~Vrvg~a~msreel~~--------------~~~GiaV~~~~~~~~~p 233 (422)
.++|.|+++.++..+... ..+.+++|++++ ++||+|+.++ +++.+ .+.|+. ...+..+|
T Consensus 6 ~~~P~w~~~~~~~~~g~e~~~~~~a~~~~~~~~~lRvN~lk~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 80 (456)
T 3m4x_A 6 TTLPQQFIKKYRLLLGEEASDFFSALEQGSVKKGFRWNPLKP--AGLDMVQTYHSEELQPAPYSNEGFL---GTVNGKSF 80 (456)
T ss_dssp -CCCHHHHHHHHHHHGGGHHHHHHHHHHCCCCCEEECCTTST--THHHHHHHHTCSSCCBCTTCTTEEE---SCCCTTSH
T ss_pred hhChHHHHHHHHHHhCHHHHHHHHHcCCCCCCcEEEEcCccH--HHHHHhcCCcccccCCCCCCcceEE---cCCCCCCh
Confidence 578999999888877533 346678889999 9999999998 44432 122332 11233444
Q ss_pred CccccccceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 234 SFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 234 ~~~~~~~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
.| .+|++++||.+||+++.+|++++|++|||+|||||+||+++|+++++.|+|+|+|+++.|++.+++|++++|+.|
T Consensus 81 ~~---~~G~~~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~n 157 (456)
T 3m4x_A 81 LH---QAGYEYSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSN 157 (456)
T ss_dssp HH---HTTSCEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSS
T ss_pred HH---hCCcEEEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCc
Confidence 44 799999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred eEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHH
Q 014571 314 ITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINA 393 (422)
Q Consensus 314 v~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~ 393 (422)
|.++++|+..+.... .+.||+||+||||||+|+ +|++|+..++|++... ..++.+|++||+
T Consensus 158 v~v~~~Da~~l~~~~--------------~~~FD~Il~DaPCSg~G~---~rr~p~~~~~~~~~~~--~~l~~~Q~~iL~ 218 (456)
T 3m4x_A 158 AIVTNHAPAELVPHF--------------SGFFDRIVVDAPCSGEGM---FRKDPNAIKEWTEESP--LYCQKRQQEILS 218 (456)
T ss_dssp EEEECCCHHHHHHHH--------------TTCEEEEEEECCCCCGGG---TTTCHHHHHHCCTTHH--HHHHHHHHHHHH
T ss_pred eEEEeCCHHHhhhhc--------------cccCCEEEECCCCCCccc---cccCHHHhhhcCHHHH--HHHHHHHHHHHH
Confidence 999999998865311 356999999999999999 9999999988988765 689999999999
Q ss_pred Hhcc-ceeccEEEe
Q 014571 394 LVVG-LRIQKVLVL 406 (422)
Q Consensus 394 ~a~~-lr~~~~~~~ 406 (422)
++.. |+.+|.||+
T Consensus 219 ~a~~~LkpGG~LvY 232 (456)
T 3m4x_A 219 SAIKMLKNKGQLIY 232 (456)
T ss_dssp HHHHTEEEEEEEEE
T ss_pred HHHHhcCCCcEEEE
Confidence 9976 799999998
No 6
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=1.4e-33 Score=279.78 Aligned_cols=194 Identities=19% Similarity=0.274 Sum_probs=145.7
Q ss_pred CCCceEEEEccCccCHHHHhc--ccCcceeecc------------------------------ccccCCCCccccccceE
Q 014571 196 ERSGLYIGQGTAMMSRAGIFR--ASEGIAVDMH------------------------------NRIFQLPSFYDVLEGEI 243 (422)
Q Consensus 196 ~~~~v~Vrvg~a~msreel~~--~~~GiaV~~~------------------------------~~~~~~p~~~~~~~G~~ 243 (422)
..+++++|+|+.+++++++.+ ...|+.++.. .++..+|. |++|.+
T Consensus 8 ~~~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~---~~~G~~ 84 (309)
T 2b9e_A 8 SQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPL---YRAGHL 84 (309)
T ss_dssp -CCCEEEEECTTTCCHHHHHHHHHHTTCEEEEECSSHHHHHTCCTTEEEECSSSTTEEEECTTCCCTTSHH---HHTTSE
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHhCCCeeeeccccccccccccccccccccCCCceEEeCCCCCcccChH---HHCCeE
Confidence 567899999999999998775 3456554332 12223333 479999
Q ss_pred EEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhh
Q 014571 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (422)
Q Consensus 244 ~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~ 323 (422)
++||.+||+++.+|++++|++|||+|||||+||+++|+++++.|+|+|+|+++.|++.+++|++++|+.||+++++|+..
T Consensus 85 ~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~ 164 (309)
T 2b9e_A 85 ILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLA 164 (309)
T ss_dssp EECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGG
T ss_pred EEECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHh
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999987
Q ss_pred hhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhccceeccE
Q 014571 324 AVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVGLRIQKV 403 (422)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~lr~~~~ 403 (422)
+.... .....||+||+||||||+|+ +|++|+..+.+.....++..++.+|++||++|+.+..+|.
T Consensus 165 ~~~~~------------~~~~~fD~Vl~D~PcSg~G~---~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~gG~ 229 (309)
T 2b9e_A 165 VSPSD------------PRYHEVHYILLDPSCSGSGM---PSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQR 229 (309)
T ss_dssp SCTTC------------GGGTTEEEEEECCCCCC---------------------CCHHHHHHHHHHHHHHHTTCTTCCE
T ss_pred cCccc------------cccCCCCEEEEcCCcCCCCC---CccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccCCCE
Confidence 53210 00146999999999999999 9999998754322223346899999999999987534899
Q ss_pred EEeh
Q 014571 404 LVLT 407 (422)
Q Consensus 404 ~~~t 407 (422)
||++
T Consensus 230 lvYs 233 (309)
T 2b9e_A 230 LVYS 233 (309)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9983
No 7
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=3.6e-34 Score=284.02 Aligned_cols=219 Identities=19% Similarity=0.159 Sum_probs=178.2
Q ss_pred cccccCCCCchhhhhhhcccCC-CCCCCcccCCCceEEEEccCccCHHHHhc--ccCcceeecc-------------ccc
Q 014571 166 VEQPTLDGGWGLGITRGTVLQG-SQTDPYYFERSGLYIGQGTAMMSRAGIFR--ASEGIAVDMH-------------NRI 229 (422)
Q Consensus 166 l~~~~~~p~W~~~~~r~~~~~~-~~~~~~~~~~~~v~Vrvg~a~msreel~~--~~~GiaV~~~-------------~~~ 229 (422)
+.-.+++|.|+++.++..+... ..+.+++++++++++|+|+.+.+++++.+ ...|+.++.. .++
T Consensus 10 l~~~~~~P~w~~~~~~~~~g~~~~~~~~~~~~~~p~~~RvN~~k~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 89 (315)
T 1ixk_A 10 KLLRLGYSKLFADRYFQLWGERAIRIAEAMEKPLPRCFRVNTLKISVQDLVKRLNKKGFQFKRVPWAKEGFCLTREPFSI 89 (315)
T ss_dssp HHHHTTCCHHHHHHHHHHHTTHHHHHHHHTTSCCCCEEEECTTTSCHHHHHHHHHHTTCEEEEETTEEEEEEEEECSSCG
T ss_pred HHHHhCCcHHHHHHHHHHccHHHHHHHHHcCCCCCeEEEEeCCCCCHHHHHHHHHhCCCeeeECCCCCceEEEeCCCCCc
Confidence 4556899999999988776511 24567788999999999999999998875 2345443322 123
Q ss_pred cCCCCccccccceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh
Q 014571 230 FQLPSFYDVLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM 309 (422)
Q Consensus 230 ~~~p~~~~~~~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~ 309 (422)
..+|. |.+|.+++||.+||+++.++++++|++|||+|||||+||+++++.+++.++|+|+|+++.+++.+++|++++
T Consensus 90 ~~~~~---~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~ 166 (315)
T 1ixk_A 90 TSTPE---FLTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRL 166 (315)
T ss_dssp GGSHH---HHTTSEEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH
T ss_pred ccChh---HhcceEEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHh
Confidence 33444 479999999999999999999999999999999999999999999887899999999999999999999999
Q ss_pred CCcceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHH
Q 014571 310 GLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQE 389 (422)
Q Consensus 310 g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~ 389 (422)
|+.|++++++|+..+... .+.||.|++|+||||.|+ ++++|+..++|++... .+++..|+
T Consensus 167 g~~~v~~~~~D~~~~~~~---------------~~~fD~Il~d~Pcsg~g~---~~~~p~~~~~~~~~~~--~~~~~~q~ 226 (315)
T 1ixk_A 167 GVLNVILFHSSSLHIGEL---------------NVEFDKILLDAPCTGSGT---IHKNPERKWNRTMDDI--KFCQGLQM 226 (315)
T ss_dssp TCCSEEEESSCGGGGGGG---------------CCCEEEEEEECCTTSTTT---CC--------CCHHHH--HHHHHHHH
T ss_pred CCCeEEEEECChhhcccc---------------cccCCEEEEeCCCCCccc---ccCChhHhhcCCHHHH--HHHHHHHH
Confidence 999999999999876421 246999999999999999 9999999988988765 58999999
Q ss_pred HHHHHhcc-ceeccEEEeh
Q 014571 390 EINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 390 ~IL~~a~~-lr~~~~~~~t 407 (422)
++|+++.. |+.+|.++++
T Consensus 227 ~~L~~~~~~LkpGG~lv~s 245 (315)
T 1ixk_A 227 RLLEKGLEVLKPGGILVYS 245 (315)
T ss_dssp HHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEE
Confidence 99999977 8999999994
No 8
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=100.00 E-value=3.4e-32 Score=280.43 Aligned_cols=230 Identities=22% Similarity=0.244 Sum_probs=187.5
Q ss_pred cccCHHHHHHHHHHhchhhHHHHHHHhcCCCCccEEEeecCCCCHHHHHHHHHHHHHhcCCCCcccccccccccCCCccc
Q 014571 13 LRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTIS 92 (422)
Q Consensus 13 ~~~~~~v~~~l~~~~~~~~~~~~~~~l~~pp~~~~~Rvnt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (422)
.+++..+.+.+.+.|| +.++++++++..||. .++||||+|++++++++.|.+. | +.
T Consensus 143 ~~~p~w~~~~~~~~~g-~~~~~~~~~~~~~~~-~~~Rvn~~~~~~~~~~~~l~~~---------g-------------~~ 198 (429)
T 1sqg_A 143 YLHPSWLLKRLQKAYP-EQWQSIVEANNQRPP-MWLRINRTHHSRDSWLALLDEA---------G-------------MK 198 (429)
T ss_dssp GCSCHHHHHHHHHHCT-TTHHHHHHHHTSCCC-EEEEECTTTCCHHHHHHHHHHT---------T-------------CC
T ss_pred hcCcHHHHHHHHHHhh-HHHHHHHHhCCCCCC-eEEEEcCCCCCHHHHHHHHHhC---------C-------------Cc
Confidence 4577889999999999 679999999998876 8999999999999999887643 3 22
Q ss_pred cccCCCCCcEEEEeCCCCcccCCCCCCCCCCCEEEEccccHHHHHcCCccccCceeeccCCccCCCEEEEeeccccccCC
Q 014571 93 ESQIPGLEYVVFVKGSGPHTIDYGYEPDKPPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLD 172 (422)
Q Consensus 93 ~~~~~~l~~~l~~~~~gp~~~~~~~~~~~~~k~ViVd~~~~eaVlrGA~v~~PGil~~~~~~~~gd~V~v~~~l~~~~~~ 172 (422)
..+.|+.++.+.++..
T Consensus 199 ~~~~~~~~~~~~~~~~---------------------------------------------------------------- 214 (429)
T 1sqg_A 199 GFPHADYPDAVRLETP---------------------------------------------------------------- 214 (429)
T ss_dssp EECCTTCTTEEEESSC----------------------------------------------------------------
T ss_pred eeecCCCCCEEEECCC----------------------------------------------------------------
Confidence 2233333333222100
Q ss_pred CCchhhhhhhcccCCCCCCCcccCCCceEEEEccCccCHHHHhcccCcceeeccccccCCCCccccccceEEEeChhHHH
Q 014571 173 GGWGLGITRGTVLQGSQTDPYYFERSGLYIGQGTAMMSRAGIFRASEGIAVDMHNRIFQLPSFYDVLEGEIFLQNLPSIV 252 (422)
Q Consensus 173 p~W~~~~~r~~~~~~~~~~~~~~~~~~v~Vrvg~a~msreel~~~~~GiaV~~~~~~~~~p~~~~~~~G~~~~Qd~~S~l 252 (422)
.++..+|.| .+|.+++||.+||+
T Consensus 215 ------------------------------------------------------~~~~~~~~~---~~G~~~~qd~~s~~ 237 (429)
T 1sqg_A 215 ------------------------------------------------------APVHALPGF---EDGWVTVQDASAQG 237 (429)
T ss_dssp ------------------------------------------------------CCGGGSTTG---GGTSEEECCHHHHT
T ss_pred ------------------------------------------------------CCcccChHH---hCCCeEeeCHHHHH
Confidence 011234444 58999999999999
Q ss_pred HHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCC
Q 014571 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESN 332 (422)
Q Consensus 253 v~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~ 332 (422)
++.++++++|++|||+|||||+||+++++.+++ ++|+|+|+++.+++.+++|++++|+. +.++++|+.......
T Consensus 238 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~~-~~~~~~D~~~~~~~~---- 311 (429)
T 1sqg_A 238 CMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRYPSQWC---- 311 (429)
T ss_dssp HHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTCC-CEEEECCTTCTHHHH----
T ss_pred HHHHcCCCCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCCC-eEEEeCchhhchhhc----
Confidence 999999999999999999999999999999865 89999999999999999999999984 789999988654211
Q ss_pred CCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEeh
Q 014571 333 DEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 333 ~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
..+.||.|++|+||||.|+ ++++|+..|.|++... ..++.+|+++|+++.. ++.+|.++++
T Consensus 312 ---------~~~~fD~Vl~D~Pcsg~g~---~~~~p~~~~~~~~~~~--~~l~~~q~~~L~~a~~~LkpGG~lvys 373 (429)
T 1sqg_A 312 ---------GEQQFDRILLDAPCSATGV---IRRHPDIKWLRRDRDI--PELAQLQSEILDAIWPHLKTGGTLVYA 373 (429)
T ss_dssp ---------TTCCEEEEEEECCCCCGGG---TTTCTTHHHHCCTTHH--HHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred ---------ccCCCCEEEEeCCCCcccc---cCCCcchhhcCCHHHH--HHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 0246999999999999999 9999999877776554 6899999999999987 8999999993
No 9
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.96 E-value=6.6e-29 Score=240.96 Aligned_cols=192 Identities=23% Similarity=0.337 Sum_probs=146.1
Q ss_pred cccCCCceEEEEccCccCHHHHhc--ccCcceeec------------cccccCCCCccccccceEEEeChhHHHHHHhcC
Q 014571 193 YYFERSGLYIGQGTAMMSRAGIFR--ASEGIAVDM------------HNRIFQLPSFYDVLEGEIFLQNLPSIVTAHALD 258 (422)
Q Consensus 193 ~~~~~~~v~Vrvg~a~msreel~~--~~~GiaV~~------------~~~~~~~p~~~~~~~G~~~~Qd~~S~lv~~~L~ 258 (422)
.+++++++++|+|..+.+++++.+ ...|+.++. ..++..+|. |.+|.+++||.+|++++.+++
T Consensus 4 ~~~~~~~~~~rvn~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~G~~~~qd~~s~l~~~~l~ 80 (274)
T 3ajd_A 4 VYKGEKMQFIRVNTLKINPEVLKKRLENKGVVLEKTFLDYAFEVKKSPFSIGSTPE---YLFGYYMPQSISSMIPPIVLN 80 (274)
T ss_dssp -----CCEEEEECTTTCCHHHHHHHHHTTTCEEEECSSTTEEEEEECSSCTTSSHH---HHTTSEEECCSGGGHHHHHHC
T ss_pred hhCCCCCeEEEEeCCCCCHHHHHHHHHHCCCeecCCCCCceEEEecCCCCcccChh---hhCCeEEEeCHHHHHHHHHhC
Confidence 345778999999999999998875 344554432 112223333 479999999999999999999
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~ 338 (422)
+++|++|||+|||||+||+++++++++.++|+|+|+++.+++.+++|+++.|+++++++++|+..+.....
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~--------- 151 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLL--------- 151 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH---------
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhh---------
Confidence 99999999999999999999999987779999999999999999999999999999999999987653210
Q ss_pred CCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEeh
Q 014571 339 NSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 339 ~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
...+.||.|++|+||||.|+ ++++| +|++... .++...|.++|+++.. |+.+|.++++
T Consensus 152 --~~~~~fD~Vl~d~Pcs~~g~---~~~~p----~~~~~~~--~~~~~~~~~~l~~~~~~LkpgG~lv~s 210 (274)
T 3ajd_A 152 --KNEIFFDKILLDAPCSGNII---KDKNR----NVSEEDI--KYCSLRQKELIDIGIDLLKKDGELVYS 210 (274)
T ss_dssp --HTTCCEEEEEEEECCC-------------------HHHH--TGGGTCHHHHHHHHHHHEEEEEEEEEE
T ss_pred --hccccCCEEEEcCCCCCCcc---cccCC----CCCHHHH--HHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 00246999999999999999 99997 5777654 5788899999999977 8999999993
No 10
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.39 E-value=1.1e-12 Score=124.76 Aligned_cols=83 Identities=19% Similarity=0.172 Sum_probs=68.9
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccc
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNM 337 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~ 337 (422)
.++||++|||+|||||++|.++|+.++++|+|+|+|+++.+++.+.+.+++. .|+.++.+|++......
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~--------- 141 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYK--------- 141 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTT---------
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhh---------
Confidence 3889999999999999999999999988999999999999998877766653 68999999998643210
Q ss_pred cCCCCCCCCCceeecCC
Q 014571 338 CNSKDNNYITSQTSDSM 354 (422)
Q Consensus 338 ~~~~~~~~FD~VLvDaP 354 (422)
...+.||.|++|++
T Consensus 142 ---~~~~~~D~I~~d~a 155 (232)
T 3id6_C 142 ---SVVENVDVLYVDIA 155 (232)
T ss_dssp ---TTCCCEEEEEECCC
T ss_pred ---ccccceEEEEecCC
Confidence 11356999999865
No 11
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.35 E-value=2.5e-12 Score=131.23 Aligned_cols=131 Identities=19% Similarity=0.156 Sum_probs=104.4
Q ss_pred cccceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEE
Q 014571 238 VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTY 317 (422)
Q Consensus 238 ~~~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~ 317 (422)
++.|.|+.|....+++...+ ++|++|||+|||+|++|.++|.. ...|+|+|+|+.+++.+++|++..|+.+ .+.
T Consensus 193 ~~tG~f~dqr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~---ga~V~avDis~~al~~a~~n~~~ng~~~-~~~ 266 (393)
T 4dmg_A 193 QKTGYYLDQRENRRLFEAMV--RPGERVLDVYSYVGGFALRAARK---GAYALAVDKDLEALGVLDQAALRLGLRV-DIR 266 (393)
T ss_dssp CTTSSCGGGHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCCC-EEE
T ss_pred cccCcCCCHHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHhCCCC-cEE
Confidence 46889999999988877664 47999999999999999999986 2449999999999999999999999873 566
Q ss_pred ecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc
Q 014571 318 KLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG 397 (422)
Q Consensus 318 ~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~ 397 (422)
++|+....... .+.||.|++|+||-..+. . .+....+.+.++++.+..
T Consensus 267 ~~D~~~~l~~~--------------~~~fD~Ii~dpP~f~~~~----------------~--~~~~~~~~~~~ll~~a~~ 314 (393)
T 4dmg_A 267 HGEALPTLRGL--------------EGPFHHVLLDPPTLVKRP----------------E--ELPAMKRHLVDLVREALR 314 (393)
T ss_dssp ESCHHHHHHTC--------------CCCEEEEEECCCCCCSSG----------------G--GHHHHHHHHHHHHHHHHH
T ss_pred EccHHHHHHHh--------------cCCCCEEEECCCcCCCCH----------------H--HHHHHHHHHHHHHHHHHH
Confidence 99998765321 123999999999943322 1 123566788899998866
Q ss_pred -ceeccEEEe
Q 014571 398 -LRIQKVLVL 406 (422)
Q Consensus 398 -lr~~~~~~~ 406 (422)
|+.+|.|++
T Consensus 315 ~LkpGG~Lv~ 324 (393)
T 4dmg_A 315 LLAEEGFLWL 324 (393)
T ss_dssp TEEEEEEEEE
T ss_pred hcCCCCEEEE
Confidence 799999985
No 12
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.32 E-value=1.9e-11 Score=116.44 Aligned_cols=144 Identities=13% Similarity=0.104 Sum_probs=101.0
Q ss_pred cceEEEeChh-------HHHHHHhcCCC-CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC
Q 014571 240 EGEIFLQNLP-------SIVTAHALDPQ-KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311 (422)
Q Consensus 240 ~G~~~~Qd~~-------S~lv~~~L~p~-pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~ 311 (422)
.+..+.|+.. |.+.+.++.++ ++.+|||+|||+|..+..+++.. .++|+|+|+++.+++.+++|++..|+
T Consensus 20 ~~~~i~q~~~~~~~~~d~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~--~~~v~gvDi~~~~~~~a~~n~~~~~~ 97 (259)
T 3lpm_A 20 ENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRT--KAKIVGVEIQERLADMAKRSVAYNQL 97 (259)
T ss_dssp TTEEEEEBTTTBCCCHHHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTC--CCEEEEECCSHHHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCCccCcHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhc--CCcEEEEECCHHHHHHHHHHHHHCCC
Confidence 4455567666 89999999999 99999999999999999999884 34999999999999999999999998
Q ss_pred c-ceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCcccc-CchhhhhhCCCCCccccccCcccchhHHHHH
Q 014571 312 K-CITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK-EVPSIAAEGLNGDKSCKEKGRTCGECGMAQE 389 (422)
Q Consensus 312 ~-nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~-G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~ 389 (422)
. +++++++|+....... ..+.||.|++|+|+... +. -..+++........ .....-.
T Consensus 98 ~~~v~~~~~D~~~~~~~~-------------~~~~fD~Ii~npPy~~~~~~---~~~~~~~~~~~a~~-----~~~~~~~ 156 (259)
T 3lpm_A 98 EDQIEIIEYDLKKITDLI-------------PKERADIVTCNPPYFATPDT---SLKNTNEHFRIARH-----EVMCTLE 156 (259)
T ss_dssp TTTEEEECSCGGGGGGTS-------------CTTCEEEEEECCCC-------------------------------HHHH
T ss_pred cccEEEEECcHHHhhhhh-------------ccCCccEEEECCCCCCCccc---cCCCCchHHHhhhc-----cccCCHH
Confidence 6 5999999998764311 13579999999999776 22 22333322111110 1112334
Q ss_pred HHHHHhcc-ceeccEEEe
Q 014571 390 EINALVVG-LRIQKVLVL 406 (422)
Q Consensus 390 ~IL~~a~~-lr~~~~~~~ 406 (422)
++++.+.. |+.+|.+++
T Consensus 157 ~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 157 DTIRVAASLLKQGGKANF 174 (259)
T ss_dssp HHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHccCCcEEEE
Confidence 67777755 899999988
No 13
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.27 E-value=2.4e-11 Score=116.87 Aligned_cols=146 Identities=18% Similarity=0.137 Sum_probs=104.6
Q ss_pred cceEEEeChhHHHHHHhcCC--CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEE
Q 014571 240 EGEIFLQNLPSIVTAHALDP--QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTY 317 (422)
Q Consensus 240 ~G~~~~Qd~~S~lv~~~L~p--~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~ 317 (422)
.|.+..+.....++..+++. .++.+|||+|||+|..+..++... +..+|+|+|+|+.+++.+++|+++.|++++.++
T Consensus 86 ~~~~ipr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~ 164 (276)
T 2b3t_A 86 PATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHIL 164 (276)
T ss_dssp TTSCCCCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEE
T ss_pred CCCcccCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEE
Confidence 44445555556666555542 678899999999999999999876 457999999999999999999999999899999
Q ss_pred ecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCccc--chhHHHHHHHHHHh
Q 014571 318 KLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTC--GECGMAQEEINALV 395 (422)
Q Consensus 318 ~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~--~~l~~~Q~~IL~~a 395 (422)
++|...... .+.||.|++++||.+.+. .++ .++.. .+.|...-. ..-....+++++.+
T Consensus 165 ~~d~~~~~~----------------~~~fD~Iv~npPy~~~~~-~~l--~~~v~-~~~p~~al~~~~~g~~~~~~~l~~~ 224 (276)
T 2b3t_A 165 QSDWFSALA----------------GQQFAMIVSNPPYIDEQD-PHL--QQGDV-RFEPLTALVAADSGMADIVHIIEQS 224 (276)
T ss_dssp CCSTTGGGT----------------TCCEEEEEECCCCBCTTC-HHH--HSSGG-GSSCSTTTBCHHHHTHHHHHHHHHH
T ss_pred Ecchhhhcc----------------cCCccEEEECCCCCCccc-ccc--Chhhh-hcCcHHHHcCCCcHHHHHHHHHHHH
Confidence 999875321 245999999999998754 111 22221 122211100 01123567888888
Q ss_pred cc-ceeccEEEe
Q 014571 396 VG-LRIQKVLVL 406 (422)
Q Consensus 396 ~~-lr~~~~~~~ 406 (422)
.. |+.+|.+++
T Consensus 225 ~~~LkpgG~l~~ 236 (276)
T 2b3t_A 225 RNALVSGGFLLL 236 (276)
T ss_dssp GGGEEEEEEEEE
T ss_pred HHhcCCCCEEEE
Confidence 66 899999998
No 14
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.26 E-value=6.5e-12 Score=127.09 Aligned_cols=133 Identities=24% Similarity=0.239 Sum_probs=104.8
Q ss_pred ccceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEe
Q 014571 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318 (422)
Q Consensus 239 ~~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~ 318 (422)
+.|.|+.|....++++.+ +|++|||+|||+|+.+.++|.. ..+|+++|+++..++.+++|++..|+.++++++
T Consensus 191 ~~g~f~~~~~~~~~~~~~----~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~ 263 (382)
T 1wxx_A 191 KTGAYLDQRENRLYMERF----RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLE 263 (382)
T ss_dssp CCCCCGGGHHHHHHGGGC----CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEE
T ss_pred cCccccchHHHHHHHHhc----CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEE
Confidence 568777777766655443 7899999999999999999987 479999999999999999999999998899999
Q ss_pred cchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-
Q 014571 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG- 397 (422)
Q Consensus 319 ~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~- 397 (422)
+|+........ .....||.|++|||+.+... .. +......+.+++..+..
T Consensus 264 ~d~~~~~~~~~-----------~~~~~fD~Ii~dpP~~~~~~----------------~~--~~~~~~~~~~~l~~~~~~ 314 (382)
T 1wxx_A 264 ANAFDLLRRLE-----------KEGERFDLVVLDPPAFAKGK----------------KD--VERAYRAYKEVNLRAIKL 314 (382)
T ss_dssp SCHHHHHHHHH-----------HTTCCEEEEEECCCCSCCST----------------TS--HHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHH-----------hcCCCeeEEEECCCCCCCCh----------------hH--HHHHHHHHHHHHHHHHHh
Confidence 99987643210 01346999999999865433 01 13456678888888865
Q ss_pred ceeccEEEeh
Q 014571 398 LRIQKVLVLT 407 (422)
Q Consensus 398 lr~~~~~~~t 407 (422)
|+.+|.++++
T Consensus 315 LkpgG~l~~~ 324 (382)
T 1wxx_A 315 LKEGGILATA 324 (382)
T ss_dssp EEEEEEEEEE
T ss_pred cCCCCEEEEE
Confidence 8999999883
No 15
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.24 E-value=1.8e-11 Score=133.40 Aligned_cols=135 Identities=13% Similarity=0.082 Sum_probs=105.9
Q ss_pred ccceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc--ceEE
Q 014571 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK--CITT 316 (422)
Q Consensus 239 ~~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~--nv~~ 316 (422)
+.|.|+-|....+++.... +|.+|||+|||+|+.|.+++.. +..+|+++|+|+.+++.+++|++..|+. ++++
T Consensus 520 ~tG~f~d~r~~r~~l~~~~---~g~~VLDlg~GtG~~sl~aa~~--ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~ 594 (703)
T 3v97_A 520 DTGLFLDHRIARRMLGQMS---KGKDFLNLFSYTGSATVHAGLG--GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRL 594 (703)
T ss_dssp SCSCCGGGHHHHHHHHHHC---TTCEEEEESCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEE
T ss_pred cCCCcccHHHHHHHHHHhc---CCCcEEEeeechhHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEE
Confidence 6788888888877777654 6899999999999999999874 4468999999999999999999999986 7999
Q ss_pred EecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhc
Q 014571 317 YKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVV 396 (422)
Q Consensus 317 ~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~ 396 (422)
+++|+.++.... .+.||.|++||||.+.+. +..+ . ....+.+.+|++.+.
T Consensus 595 i~~D~~~~l~~~--------------~~~fD~Ii~DPP~f~~~~-----~~~~---------~--~~~~~~~~~ll~~a~ 644 (703)
T 3v97_A 595 IQADCLAWLREA--------------NEQFDLIFIDPPTFSNSK-----RMED---------A--FDVQRDHLALMKDLK 644 (703)
T ss_dssp EESCHHHHHHHC--------------CCCEEEEEECCCSBC---------------------C--CBHHHHHHHHHHHHH
T ss_pred EecCHHHHHHhc--------------CCCccEEEECCccccCCc-----cchh---------H--HHHHHHHHHHHHHHH
Confidence 999998864321 356999999999977554 0111 1 135567888998886
Q ss_pred c-ceeccEEEehh
Q 014571 397 G-LRIQKVLVLTA 408 (422)
Q Consensus 397 ~-lr~~~~~~~t~ 408 (422)
. |+.+|.|+++.
T Consensus 645 ~~LkpgG~L~~s~ 657 (703)
T 3v97_A 645 RLLRAGGTIMFSN 657 (703)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HhcCCCcEEEEEE
Confidence 6 89999999844
No 16
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.24 E-value=2.1e-11 Score=121.61 Aligned_cols=137 Identities=15% Similarity=0.068 Sum_probs=102.8
Q ss_pred ccceEEEeChhHHHHHHhcC-CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc--eE
Q 014571 239 LEGEIFLQNLPSIVTAHALD-PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC--IT 315 (422)
Q Consensus 239 ~~G~~~~Qd~~S~lv~~~L~-p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n--v~ 315 (422)
+.|.+.-|......+...+. ..+|.+|||+|||+|+.+..++.. + .+|+++|+|+.+++.+++|++..|+.+ ++
T Consensus 130 ~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~--g-a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~ 206 (332)
T 2igt_A 130 HVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAA--G-AEVTHVDASKKAIGWAKENQVLAGLEQAPIR 206 (332)
T ss_dssp CCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT--T-CEEEEECSCHHHHHHHHHHHHHHTCTTSCEE
T ss_pred cceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc--C-CEEEEEECCHHHHHHHHHHHHHcCCCccceE
Confidence 56777777766666666654 567889999999999999999985 2 399999999999999999999999875 99
Q ss_pred EEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHh
Q 014571 316 TYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALV 395 (422)
Q Consensus 316 ~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a 395 (422)
++++|+.++..... .....||.|++|+||.+.+. ..+ . ......+.++++.+
T Consensus 207 ~i~~D~~~~l~~~~-----------~~~~~fD~Ii~dPP~~~~~~------~~~---------~--~~~~~~~~~ll~~~ 258 (332)
T 2igt_A 207 WICEDAMKFIQREE-----------RRGSTYDIILTDPPKFGRGT------HGE---------V--WQLFDHLPLMLDIC 258 (332)
T ss_dssp EECSCHHHHHHHHH-----------HHTCCBSEEEECCCSEEECT------TCC---------E--EEHHHHHHHHHHHH
T ss_pred EEECcHHHHHHHHH-----------hcCCCceEEEECCccccCCc------hHH---------H--HHHHHHHHHHHHHH
Confidence 99999987643210 00246999999999987664 000 0 12344556778777
Q ss_pred cc-ceeccEEEe
Q 014571 396 VG-LRIQKVLVL 406 (422)
Q Consensus 396 ~~-lr~~~~~~~ 406 (422)
.. |+.+|.+++
T Consensus 259 ~~~LkpgG~lli 270 (332)
T 2igt_A 259 REILSPKALGLV 270 (332)
T ss_dssp HHTBCTTCCEEE
T ss_pred HHhcCcCcEEEE
Confidence 54 788888666
No 17
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.23 E-value=1.7e-11 Score=124.51 Aligned_cols=135 Identities=17% Similarity=0.116 Sum_probs=103.2
Q ss_pred cccceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-c-ceE
Q 014571 238 VLEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-K-CIT 315 (422)
Q Consensus 238 ~~~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~-nv~ 315 (422)
.+.|.|..|....+++... .+|++|||+|||+|+.+.++|.. +..+|+++|+++..++.+++|++..|+ + +++
T Consensus 200 ~~tgff~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~ 274 (396)
T 3c0k_A 200 HKTGYYLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMG--GCSQVVSVDTSQEALDIARQNVELNKLDLSKAE 274 (396)
T ss_dssp STTSSCGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEE
T ss_pred ccCCcCcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCccceE
Confidence 3568887888777777766 58899999999999999999986 246999999999999999999999999 7 899
Q ss_pred EEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHh
Q 014571 316 TYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALV 395 (422)
Q Consensus 316 ~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a 395 (422)
++++|+........ .....||.|++|+|+.+... .. + ......+.+++..+
T Consensus 275 ~~~~D~~~~~~~~~-----------~~~~~fD~Ii~dpP~~~~~~--------~~---~-------~~~~~~~~~~l~~~ 325 (396)
T 3c0k_A 275 FVRDDVFKLLRTYR-----------DRGEKFDVIVMDPPKFVENK--------SQ---L-------MGACRGYKDINMLA 325 (396)
T ss_dssp EEESCHHHHHHHHH-----------HTTCCEEEEEECCSSTTTCS--------SS---S-------SCCCTHHHHHHHHH
T ss_pred EEECCHHHHHHHHH-----------hcCCCCCEEEECCCCCCCCh--------hH---H-------HHHHHHHHHHHHHH
Confidence 99999987643210 00246999999999866433 11 1 11223466777766
Q ss_pred cc-ceeccEEEe
Q 014571 396 VG-LRIQKVLVL 406 (422)
Q Consensus 396 ~~-lr~~~~~~~ 406 (422)
.. ++.+|++++
T Consensus 326 ~~~LkpgG~l~~ 337 (396)
T 3c0k_A 326 IQLLNEGGILLT 337 (396)
T ss_dssp HHTEEEEEEEEE
T ss_pred HHhcCCCcEEEE
Confidence 54 799999887
No 18
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.21 E-value=3.4e-11 Score=122.16 Aligned_cols=135 Identities=18% Similarity=0.162 Sum_probs=103.7
Q ss_pred ccceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEE
Q 014571 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTY 317 (422)
Q Consensus 239 ~~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~ 317 (422)
+.|.|+-|....+++..++ ++|++|||+|||+|+.|.++|.. +.++|+++|+++..++.+++|++..|+. +++++
T Consensus 197 ~tg~f~~~~~~~~~~~~~~--~~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~ 272 (396)
T 2as0_A 197 KTGFFLDQRENRLALEKWV--QPGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFI 272 (396)
T ss_dssp SSCCCSTTHHHHHHHGGGC--CTTCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE
T ss_pred ccCccCCHHHHHHHHHHHh--hCCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEE
Confidence 5677766766666666553 58999999999999999999986 3469999999999999999999999997 89999
Q ss_pred ecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc
Q 014571 318 KLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG 397 (422)
Q Consensus 318 ~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~ 397 (422)
++|+........ .....||.|++|+|+.+... .. +......+.+++..+..
T Consensus 273 ~~d~~~~~~~~~-----------~~~~~fD~Vi~dpP~~~~~~----------------~~--~~~~~~~~~~~l~~~~~ 323 (396)
T 2as0_A 273 VGSAFEEMEKLQ-----------KKGEKFDIVVLDPPAFVQHE----------------KD--LKAGLRAYFNVNFAGLN 323 (396)
T ss_dssp ESCHHHHHHHHH-----------HTTCCEEEEEECCCCSCSSG----------------GG--HHHHHHHHHHHHHHHHT
T ss_pred ECCHHHHHHHHH-----------hhCCCCCEEEECCCCCCCCH----------------HH--HHHHHHHHHHHHHHHHH
Confidence 999987643210 01246999999999765432 01 12444567788888765
Q ss_pred -ceeccEEEe
Q 014571 398 -LRIQKVLVL 406 (422)
Q Consensus 398 -lr~~~~~~~ 406 (422)
++.+|.+++
T Consensus 324 ~LkpgG~lv~ 333 (396)
T 2as0_A 324 LVKDGGILVT 333 (396)
T ss_dssp TEEEEEEEEE
T ss_pred hcCCCcEEEE
Confidence 899998887
No 19
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.20 E-value=1.2e-10 Score=108.02 Aligned_cols=103 Identities=13% Similarity=0.119 Sum_probs=84.0
Q ss_pred EEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchh
Q 014571 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (422)
Q Consensus 244 ~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~ 322 (422)
.+++..+++...++...++.+|||+|||+|..|.++|+.+++.++|+++|+++.+++.+++++++.|+. +|+++.+|+.
T Consensus 41 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 120 (221)
T 3u81_A 41 NVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQ 120 (221)
T ss_dssp GCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred ccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHH
Confidence 456667778888887788999999999999999999998876789999999999999999999999986 5999999998
Q ss_pred hhhhccCCCCCCccccCCCCCCCCCceeecCCc
Q 014571 323 KAVRRKNESNDEPNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPC 355 (422)
......... ...+.||.|++|+++
T Consensus 121 ~~l~~~~~~---------~~~~~fD~V~~d~~~ 144 (221)
T 3u81_A 121 DLIPQLKKK---------YDVDTLDMVFLDHWK 144 (221)
T ss_dssp HHGGGTTTT---------SCCCCCSEEEECSCG
T ss_pred HHHHHHHHh---------cCCCceEEEEEcCCc
Confidence 754322100 012579999998644
No 20
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.19 E-value=4.9e-11 Score=122.79 Aligned_cols=140 Identities=21% Similarity=0.200 Sum_probs=100.2
Q ss_pred HHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCC
Q 014571 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333 (422)
Q Consensus 254 ~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~ 333 (422)
...+++.++++|||+|||+|..+..+|+. .++|+|+|+++..++.+++|++..|++|++++++|+....... +
T Consensus 279 ~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~---~- 351 (433)
T 1uwv_A 279 LEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQ---P- 351 (433)
T ss_dssp HHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSS---G-
T ss_pred HHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhh---h-
Confidence 34567788999999999999999999987 4799999999999999999999999999999999987642110 0
Q ss_pred CccccCCCCCCCCCceeecCCccccCch-hhhhhCCCCCccccccCcccchhHH--HHH--HHHHHhccceeccEEEe--
Q 014571 334 EPNMCNSKDNNYITSQTSDSMKLHKEVP-SIAAEGLNGDKSCKEKGRTCGECGM--AQE--EINALVVGLRIQKVLVL-- 406 (422)
Q Consensus 334 ~~~~~~~~~~~~FD~VLvDaPCSg~G~l-~~lrr~p~~~~~w~~~~~~~~~l~~--~Q~--~IL~~a~~lr~~~~~~~-- 406 (422)
...+.||.|++|+|++|...+ ..+.+ ..+....+.+|.+ +.+ .+|. ..|+++..+-.+
T Consensus 352 -------~~~~~fD~Vv~dPPr~g~~~~~~~l~~-------~~p~~ivyvsc~p~tlard~~~l~-~~Gy~~~~~~~~d~ 416 (433)
T 1uwv_A 352 -------WAKNGFDKVLLDPARAGAAGVMQQIIK-------LEPIRIVYVSCNPATLARDSEALL-KAGYTIARLAMLDM 416 (433)
T ss_dssp -------GGTTCCSEEEECCCTTCCHHHHHHHHH-------HCCSEEEEEESCHHHHHHHHHHHH-HTTCEEEEEEEECC
T ss_pred -------hhcCCCCEEEECCCCccHHHHHHHHHh-------cCCCeEEEEECChHHHHhhHHHHH-HCCcEEEEEEEecc
Confidence 013469999999999987652 33332 1222221112221 222 2332 247888887766
Q ss_pred ---hhhHHHHHh
Q 014571 407 ---TALIESFLM 415 (422)
Q Consensus 407 ---t~~~~~~~~ 415 (422)
|.|+|++..
T Consensus 417 Fp~t~HvE~v~l 428 (433)
T 1uwv_A 417 FPHTGHLESMVL 428 (433)
T ss_dssp STTSSCCEEEEE
T ss_pred CCCCCeEEEEEE
Confidence 999998643
No 21
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.17 E-value=6e-11 Score=119.49 Aligned_cols=149 Identities=9% Similarity=0.037 Sum_probs=96.7
Q ss_pred HhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCC-
Q 014571 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND- 333 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~- 333 (422)
..+++. |++|||+|||+|+.|+.+|.. ..+|+|+|+++..++.+++|++..|++|++++.+|+.+..........
T Consensus 208 ~~~~~~-~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~ 283 (369)
T 3bt7_A 208 DVTKGS-KGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREF 283 (369)
T ss_dssp HHTTTC-CSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCC
T ss_pred HHhhcC-CCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccc
Confidence 334444 689999999999999999875 368999999999999999999999999999999999876432211000
Q ss_pred C-ccccCCCCCCCCCceeecCCccccCc--hhhhhhCCCCCccccccCcccchhHHHHHHHHHHhccceeccEEEe----
Q 014571 334 E-PNMCNSKDNNYITSQTSDSMKLHKEV--PSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVGLRIQKVLVL---- 406 (422)
Q Consensus 334 ~-~~~~~~~~~~~FD~VLvDaPCSg~G~--l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~lr~~~~~~~---- 406 (422)
. +. ........||.|++|||+.|... +..++ .+.....-+-+.. .++ .-.+.|. .++++..+-.+
T Consensus 284 ~~l~-~~~~~~~~fD~Vv~dPPr~g~~~~~~~~l~-~~g~ivyvsc~p~---t~a-rd~~~l~--~~y~~~~~~~~D~FP 355 (369)
T 3bt7_A 284 NRLQ-GIDLKSYQCETIFVDPPRSGLDSETEKMVQ-AYPRILYISCNPE---TLC-KNLETLS--QTHKVERLALFDQFP 355 (369)
T ss_dssp TTGG-GSCGGGCCEEEEEECCCTTCCCHHHHHHHT-TSSEEEEEESCHH---HHH-HHHHHHH--HHEEEEEEEEECCST
T ss_pred cccc-ccccccCCCCEEEECcCccccHHHHHHHHh-CCCEEEEEECCHH---HHH-HHHHHHh--hCcEEEEEEeeccCC
Confidence 0 00 00000136999999999997643 33333 3322111111100 111 1223333 36888777777
Q ss_pred -hhhHHHHHh
Q 014571 407 -TALIESFLM 415 (422)
Q Consensus 407 -t~~~~~~~~ 415 (422)
|.|+|++..
T Consensus 356 ~T~HvE~v~l 365 (369)
T 3bt7_A 356 YTHHMQCGVL 365 (369)
T ss_dssp TSSCCEEEEE
T ss_pred CCCcEEEEEE
Confidence 999998643
No 22
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.16 E-value=1.9e-10 Score=114.76 Aligned_cols=122 Identities=17% Similarity=0.052 Sum_probs=98.0
Q ss_pred HHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCC
Q 014571 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNE 330 (422)
Q Consensus 251 ~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~ 330 (422)
......+.++++.+|||+|||+|+.+..+|...++...|+++|+++.+++.+++|+++.|+.++++.++|+..++..
T Consensus 193 ~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~--- 269 (354)
T 3tma_A 193 QALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRF--- 269 (354)
T ss_dssp HHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGT---
T ss_pred HHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccc---
Confidence 34456678889999999999999999999998645689999999999999999999999998999999999886432
Q ss_pred CCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEe
Q 014571 331 SNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVL 406 (422)
Q Consensus 331 ~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~ 406 (422)
...||.|++|+|+.- . +. .. ..+..++.++++.+.. |+.+|.+++
T Consensus 270 ------------~~~~D~Ii~npPyg~-r--------------~~--~~--~~~~~~~~~~~~~~~~~LkpgG~l~i 315 (354)
T 3tma_A 270 ------------FPEVDRILANPPHGL-R--------------LG--RK--EGLFHLYWDFLRGALALLPPGGRVAL 315 (354)
T ss_dssp ------------CCCCSEEEECCCSCC---------------------C--HHHHHHHHHHHHHHHHTSCTTCEEEE
T ss_pred ------------cCCCCEEEECCCCcC-c--------------cC--Cc--ccHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 234899999999831 0 11 11 2567788899988865 788888877
No 23
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.16 E-value=6.9e-11 Score=119.94 Aligned_cols=135 Identities=9% Similarity=-0.008 Sum_probs=100.0
Q ss_pred ccceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc--ceEE
Q 014571 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK--CITT 316 (422)
Q Consensus 239 ~~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~--nv~~ 316 (422)
+.|.|.-|.....+....+ .+|++|||+|||+|+.+.++|.. +..+|+++|+++.+++.+++|++..|+. ++++
T Consensus 192 ~t~ff~~~~~~~~~~~~~~--~~~~~VLDl~cGtG~~sl~la~~--ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~ 267 (385)
T 2b78_A 192 MTGIFLDQRQVRNELINGS--AAGKTVLNLFSYTAAFSVAAAMG--GAMATTSVDLAKRSRALSLAHFEANHLDMANHQL 267 (385)
T ss_dssp CCSSCGGGHHHHHHHHHTT--TBTCEEEEETCTTTHHHHHHHHT--TBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEE
T ss_pred cCCcCCcHHHHHHHHHHHh--cCCCeEEEEeeccCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEE
Confidence 4566645555555665554 67899999999999999999985 2358999999999999999999999997 8999
Q ss_pred EecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhc
Q 014571 317 YKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVV 396 (422)
Q Consensus 317 ~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~ 396 (422)
+++|+.+...... .....||.|++|||+.+.+. . + ..+..+...++++.+.
T Consensus 268 ~~~D~~~~l~~~~-----------~~~~~fD~Ii~DPP~~~~~~------~------~------~~~~~~~~~~ll~~~~ 318 (385)
T 2b78_A 268 VVMDVFDYFKYAR-----------RHHLTYDIIIIDPPSFARNK------K------E------VFSVSKDYHKLIRQGL 318 (385)
T ss_dssp EESCHHHHHHHHH-----------HTTCCEEEEEECCCCC-----------------C------CCCHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHH-----------HhCCCccEEEECCCCCCCCh------h------h------HHHHHHHHHHHHHHHH
Confidence 9999987543211 01246999999999975432 0 0 1234456677888775
Q ss_pred c-ceeccEEEe
Q 014571 397 G-LRIQKVLVL 406 (422)
Q Consensus 397 ~-lr~~~~~~~ 406 (422)
. ++.+|.+++
T Consensus 319 ~~L~pgG~l~~ 329 (385)
T 2b78_A 319 EILSENGLIIA 329 (385)
T ss_dssp HTEEEEEEEEE
T ss_pred HhcCCCcEEEE
Confidence 4 899999888
No 24
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.16 E-value=1.1e-10 Score=109.23 Aligned_cols=93 Identities=16% Similarity=0.042 Sum_probs=80.7
Q ss_pred hHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhhhhc
Q 014571 249 PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVRR 327 (422)
Q Consensus 249 ~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~~~~ 327 (422)
...++..+....+|.+|||+|||+|+.+..+++. .++|+|+|+++.+++.+++++++.|+ .++.++++|+.....
T Consensus 66 ~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~- 141 (241)
T 3gdh_A 66 AEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS- 141 (241)
T ss_dssp HHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG-
T ss_pred HHHHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc-
Confidence 5555666666668999999999999999999986 37999999999999999999999998 689999999987641
Q ss_pred cCCCCCCccccCCCCCCCCCceeecCCccccCc
Q 014571 328 KNESNDEPNMCNSKDNNYITSQTSDSMKLHKEV 360 (422)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~ 360 (422)
.+.||.|++|+||.+.+.
T Consensus 142 ---------------~~~~D~v~~~~~~~~~~~ 159 (241)
T 3gdh_A 142 ---------------FLKADVVFLSPPWGGPDY 159 (241)
T ss_dssp ---------------GCCCSEEEECCCCSSGGG
T ss_pred ---------------cCCCCEEEECCCcCCcch
Confidence 246999999999999777
No 25
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.14 E-value=8.4e-11 Score=119.32 Aligned_cols=82 Identities=20% Similarity=0.117 Sum_probs=71.8
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh---------------CCcceEEEecchhhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM---------------GLKCITTYKLDALKAV 325 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~---------------g~~nv~~~~~Da~~~~ 325 (422)
+|.+|||+|||+|.+++++|..++ ..+|+++|+++..++.+++|+++. |+.+++++++|+..+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHH
Confidence 789999999999999999999865 357999999999999999999999 8888999999998865
Q ss_pred hccCCCCCCccccCCCCCCCCCceeecCCccc
Q 014571 326 RRKNESNDEPNMCNSKDNNYITSQTSDSMKLH 357 (422)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg 357 (422)
... ...||.|++||||+.
T Consensus 126 ~~~--------------~~~fD~I~lDP~~~~ 143 (378)
T 2dul_A 126 AER--------------HRYFHFIDLDPFGSP 143 (378)
T ss_dssp HHS--------------TTCEEEEEECCSSCC
T ss_pred Hhc--------------cCCCCEEEeCCCCCH
Confidence 321 246999999999863
No 26
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.14 E-value=1.3e-10 Score=107.46 Aligned_cols=102 Identities=16% Similarity=0.084 Sum_probs=82.5
Q ss_pred EeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEEEecchhh
Q 014571 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (422)
Q Consensus 245 ~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~ 323 (422)
++...+++...++...++.+|||+|||+|..|.++++.+++.++|+++|+++.+++.+++++++.|+.+ ++++.+|+..
T Consensus 42 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (223)
T 3duw_A 42 VSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALD 121 (223)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 345666677777677789999999999999999999998767899999999999999999999999965 9999999987
Q ss_pred hhhccCCCCCCccccCCCCCCCCCceeecCCcc
Q 014571 324 AVRRKNESNDEPNMCNSKDNNYITSQTSDSMKL 356 (422)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCS 356 (422)
....... ...+.||.|++|+++.
T Consensus 122 ~~~~~~~----------~~~~~fD~v~~d~~~~ 144 (223)
T 3duw_A 122 SLQQIEN----------EKYEPFDFIFIDADKQ 144 (223)
T ss_dssp HHHHHHH----------TTCCCCSEEEECSCGG
T ss_pred HHHHHHh----------cCCCCcCEEEEcCCcH
Confidence 5432110 0014699999998744
No 27
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.13 E-value=9.9e-11 Score=109.22 Aligned_cols=104 Identities=21% Similarity=0.191 Sum_probs=87.1
Q ss_pred cceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEe
Q 014571 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYK 318 (422)
Q Consensus 240 ~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~ 318 (422)
.|..++|...+.++..++.+.++.+|||+|||+|..+..+++.++ .++|+++|+++.+++.+++++++.|+. ++.++.
T Consensus 33 ~~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~ 111 (233)
T 2gpy_A 33 QQVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLF 111 (233)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEEC
T ss_pred cCCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 456677888888888888888999999999999999999999874 589999999999999999999999985 599999
Q ss_pred cchhhhhhccCCCCCCccccCCCCCCCCCceeecCCcc
Q 014571 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKL 356 (422)
Q Consensus 319 ~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCS 356 (422)
+|+........ ..+.||.|++|++|+
T Consensus 112 ~d~~~~~~~~~------------~~~~fD~I~~~~~~~ 137 (233)
T 2gpy_A 112 GDALQLGEKLE------------LYPLFDVLFIDAAKG 137 (233)
T ss_dssp SCGGGSHHHHT------------TSCCEEEEEEEGGGS
T ss_pred CCHHHHHHhcc------------cCCCccEEEECCCHH
Confidence 99876432110 024699999988864
No 28
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.10 E-value=5.8e-10 Score=100.88 Aligned_cols=119 Identities=13% Similarity=0.139 Sum_probs=91.0
Q ss_pred cCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhhhhccCCCCCCc
Q 014571 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVRRKNESNDEP 335 (422)
Q Consensus 257 L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~~~~~~~~~~~~ 335 (422)
..+++|.+|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++..|+ .+++++++|+..+...
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-------- 89 (197)
T 3eey_A 18 MFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKY-------- 89 (197)
T ss_dssp HHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGT--------
T ss_pred hcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhh--------
Confidence 3567899999999999999999999887678999999999999999999999998 7899999998775421
Q ss_pred cccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEeh
Q 014571 336 NMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 336 ~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
..+.||.|++|.|---.+. . +.. .....+.++++.+.. |+.+|.++++
T Consensus 90 ------~~~~fD~v~~~~~~~~~~~-----------~-~~~------~~~~~~~~~l~~~~~~Lk~gG~l~~~ 138 (197)
T 3eey_A 90 ------IDCPVKAVMFNLGYLPSGD-----------H-SIS------TRPETTIQALSKAMELLVTGGIITVV 138 (197)
T ss_dssp ------CCSCEEEEEEEESBCTTSC-----------T-TCB------CCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------ccCCceEEEEcCCcccCcc-----------c-ccc------cCcccHHHHHHHHHHhCcCCCEEEEE
Confidence 1356999999876611111 0 110 112244557777765 8999999874
No 29
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.09 E-value=7.7e-10 Score=102.48 Aligned_cols=125 Identities=8% Similarity=-0.085 Sum_probs=87.6
Q ss_pred cCCCCCCeEEEecCC-CChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCc
Q 014571 257 LDPQKGERILDMCAA-PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEP 335 (422)
Q Consensus 257 L~p~pg~~VLD~CAg-pGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~ 335 (422)
..+++|.+|||+||| +|..+..+++.. .++|+++|+++.+++.+++++++.|+ +++++++|+..... .
T Consensus 51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~------~-- 119 (230)
T 3evz_A 51 TFLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKG------V-- 119 (230)
T ss_dssp TTCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTT------T--
T ss_pred hhcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhh------c--
Confidence 346789999999999 999999999875 57999999999999999999999998 89999999753211 0
Q ss_pred cccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEe
Q 014571 336 NMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVL 406 (422)
Q Consensus 336 ~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~ 406 (422)
..+.||.|++|+|+...+. -..... ...|...... . ..-.++++.+.. |+.+|.+++
T Consensus 120 ------~~~~fD~I~~npp~~~~~~---~~~~~~-~~~~~~~~~~---~-~~~~~~l~~~~~~LkpgG~l~~ 177 (230)
T 3evz_A 120 ------VEGTFDVIFSAPPYYDKPL---GRVLTE-REAIGGGKYG---E-EFSVKLLEEAFDHLNPGGKVAL 177 (230)
T ss_dssp ------CCSCEEEEEECCCCC-------------------CCSSS---C-HHHHHHHHHHGGGEEEEEEEEE
T ss_pred ------ccCceeEEEECCCCcCCcc---ccccCh-hhhhccCccc---h-HHHHHHHHHHHHHhCCCeEEEE
Confidence 1357999999999988766 222111 1234332221 1 122567777766 899999987
No 30
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.09 E-value=1.5e-10 Score=118.12 Aligned_cols=83 Identities=11% Similarity=-0.050 Sum_probs=72.8
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc--eEEEecchhhhhh-ccCCCCCCcc
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC--ITTYKLDALKAVR-RKNESNDEPN 336 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n--v~~~~~Da~~~~~-~~~~~~~~~~ 336 (422)
++|++|||+|||+|++++++|..+++.++|+++|+++..++.+++|++..|+.+ ++++++|+..+.. ..
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~-------- 122 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEW-------- 122 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCC--------
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhh--------
Confidence 679999999999999999999986555799999999999999999999999976 9999999988653 21
Q ss_pred ccCCCCCCCCCceeecCCcc
Q 014571 337 MCNSKDNNYITSQTSDSMKL 356 (422)
Q Consensus 337 ~~~~~~~~~FD~VLvDaPCS 356 (422)
...||.|++||+|+
T Consensus 123 ------~~~fD~V~lDP~g~ 136 (392)
T 3axs_A 123 ------GFGFDYVDLDPFGT 136 (392)
T ss_dssp ------SSCEEEEEECCSSC
T ss_pred ------CCCCcEEEECCCcC
Confidence 24699999999765
No 31
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.08 E-value=9.8e-10 Score=105.46 Aligned_cols=96 Identities=18% Similarity=0.243 Sum_probs=80.3
Q ss_pred EEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecch
Q 014571 243 IFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDA 321 (422)
Q Consensus 243 ~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da 321 (422)
++.++. ..++..+++.+|.+|||+|||+|..+..+++.+++.++|+++|+++.+++.+++++++.|+ .++.++.+|.
T Consensus 96 ~~~~~~--~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 173 (277)
T 1o54_A 96 VYPKDS--SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDI 173 (277)
T ss_dssp CCHHHH--HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCG
T ss_pred cCHHHH--HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCH
Confidence 344444 3556678899999999999999999999999877678999999999999999999999998 6899999998
Q ss_pred hhhhhccCCCCCCccccCCCCCCCCCceeecCCcc
Q 014571 322 LKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKL 356 (422)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCS 356 (422)
.... + .+.||.|++|+|+.
T Consensus 174 ~~~~------~----------~~~~D~V~~~~~~~ 192 (277)
T 1o54_A 174 SEGF------D----------EKDVDALFLDVPDP 192 (277)
T ss_dssp GGCC------S----------CCSEEEEEECCSCG
T ss_pred HHcc------c----------CCccCEEEECCcCH
Confidence 7541 0 24589999998865
No 32
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.08 E-value=2.3e-10 Score=108.90 Aligned_cols=88 Identities=16% Similarity=0.215 Sum_probs=74.6
Q ss_pred cCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcc
Q 014571 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPN 336 (422)
Q Consensus 257 L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~ 336 (422)
|.++||++|||++||+|..|.++|+.++++|+|+|+|+++.+++.+++++++. .|+..+.+|++.+....
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~~~p~~~~-------- 142 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPILGDARFPEKYR-------- 142 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEESCTTCGGGGT--------
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEEEeccCccccc--------
Confidence 56899999999999999999999999999999999999999999999988764 58999999987653211
Q ss_pred ccCCCCCCCCCceeecCCcccc
Q 014571 337 MCNSKDNNYITSQTSDSMKLHK 358 (422)
Q Consensus 337 ~~~~~~~~~FD~VLvDaPCSg~ 358 (422)
...+.||.|++|.+....
T Consensus 143 ----~~~~~vDvVf~d~~~~~~ 160 (233)
T 4df3_A 143 ----HLVEGVDGLYADVAQPEQ 160 (233)
T ss_dssp ----TTCCCEEEEEECCCCTTH
T ss_pred ----cccceEEEEEEeccCChh
Confidence 123568999999887764
No 33
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.08 E-value=2e-10 Score=118.17 Aligned_cols=134 Identities=13% Similarity=0.080 Sum_probs=97.1
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCC
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNES 331 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~ 331 (422)
+...++++.++++|||+|||+|..+..+|+. ..+|+|+|+++.+++.+++|++..|++ ++++++|+.....
T Consensus 281 l~~~~~~~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~----- 351 (425)
T 2jjq_A 281 LVRKVSELVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSV----- 351 (425)
T ss_dssp HHHHHHHHCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCC-----
T ss_pred HHHHhhccCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCc-----
Confidence 3333434678999999999999999999986 358999999999999999999999998 9999999876421
Q ss_pred CCCccccCCCCCCCCCceeecCCccccCc--hhhhhhCCCCCccccccCcccchhH-H-HHHHHHHHhccceeccEEEe-
Q 014571 332 NDEPNMCNSKDNNYITSQTSDSMKLHKEV--PSIAAEGLNGDKSCKEKGRTCGECG-M-AQEEINALVVGLRIQKVLVL- 406 (422)
Q Consensus 332 ~~~~~~~~~~~~~~FD~VLvDaPCSg~G~--l~~lrr~p~~~~~w~~~~~~~~~l~-~-~Q~~IL~~a~~lr~~~~~~~- 406 (422)
..||.|++|+|++|... ++.+++ ..+.+.-+-+|. . +.+++ +... +++..+-.+
T Consensus 352 ------------~~fD~Vv~dPPr~g~~~~~~~~l~~-------l~p~givyvsc~p~tlarDl-~~l~-y~l~~~~~~D 410 (425)
T 2jjq_A 352 ------------KGFDTVIVDPPRAGLHPRLVKRLNR-------EKPGVIVYVSCNPETFARDV-KMLD-YRIDEIVALD 410 (425)
T ss_dssp ------------TTCSEEEECCCTTCSCHHHHHHHHH-------HCCSEEEEEESCHHHHHHHH-HHSS-CCEEEEEEEC
T ss_pred ------------cCCCEEEEcCCccchHHHHHHHHHh-------cCCCcEEEEECChHHHHhHH-hhCe-EEEEEEEEEC
Confidence 15899999999988753 333433 223332222222 2 33332 2223 888887777
Q ss_pred ----hhhHHHHHh
Q 014571 407 ----TALIESFLM 415 (422)
Q Consensus 407 ----t~~~~~~~~ 415 (422)
|.|+|++..
T Consensus 411 mFP~T~HvE~v~l 423 (425)
T 2jjq_A 411 MFPHTPHVELVAK 423 (425)
T ss_dssp CSTTSSCCEEEEE
T ss_pred cCCCCceEEEEEE
Confidence 999998654
No 34
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.06 E-value=1.7e-10 Score=113.73 Aligned_cols=95 Identities=15% Similarity=0.117 Sum_probs=78.8
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCC
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNES 331 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~ 331 (422)
.+...|++++|.+|||+|||+|+.|..+++..+ .++|+|+|+++.+++.++++++.+| .++.++++|...++......
T Consensus 17 e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~l~~~ 94 (301)
T 1m6y_A 17 EVIEFLKPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFLLKTL 94 (301)
T ss_dssp HHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHHHHHT
T ss_pred HHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHHHHhc
Confidence 355678899999999999999999999999875 6899999999999999999999988 78999999988764211100
Q ss_pred CCCccccCCCCCCCCCceeecCCcccc
Q 014571 332 NDEPNMCNSKDNNYITSQTSDSMKLHK 358 (422)
Q Consensus 332 ~~~~~~~~~~~~~~FD~VLvDaPCSg~ 358 (422)
....||.|++|+|||+.
T Consensus 95 ----------g~~~~D~Vl~D~gvSs~ 111 (301)
T 1m6y_A 95 ----------GIEKVDGILMDLGVSTY 111 (301)
T ss_dssp ----------TCSCEEEEEEECSCCHH
T ss_pred ----------CCCCCCEEEEcCccchh
Confidence 01468999999999864
No 35
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.06 E-value=3.9e-10 Score=104.17 Aligned_cols=101 Identities=12% Similarity=0.074 Sum_probs=81.1
Q ss_pred EeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEEEecchhh
Q 014571 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALK 323 (422)
Q Consensus 245 ~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~ 323 (422)
++...+.+...++...++.+|||+|||+|..|.++++.+++.++|+++|+++.+++.+++++++.|+.+ ++++++|+..
T Consensus 48 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 127 (225)
T 3tr6_A 48 TAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKD 127 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHH
Confidence 445556666667777788999999999999999999988767999999999999999999999999965 9999999976
Q ss_pred hhhccCCCCCCccccCCCCCCCCCceeecCC
Q 014571 324 AVRRKNESNDEPNMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaP 354 (422)
......... ..+.||.|++|++
T Consensus 128 ~~~~~~~~~---------~~~~fD~v~~~~~ 149 (225)
T 3tr6_A 128 TLAELIHAG---------QAWQYDLIYIDAD 149 (225)
T ss_dssp HHHHHHTTT---------CTTCEEEEEECSC
T ss_pred HHHHhhhcc---------CCCCccEEEECCC
Confidence 543211000 0256999999886
No 36
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.06 E-value=3e-10 Score=109.18 Aligned_cols=100 Identities=13% Similarity=0.199 Sum_probs=72.6
Q ss_pred ccceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh-CCcceEEE
Q 014571 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM-GLKCITTY 317 (422)
Q Consensus 239 ~~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~-g~~nv~~~ 317 (422)
..+...+++..++.++..+++++|.+|||+|||+|..+.++++.+.+.++|+++|+++.+++.+++++++. |..++++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~ 167 (275)
T 1yb2_A 88 RRNTQIISEIDASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTS 167 (275)
T ss_dssp ------------------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEE
T ss_pred cccccccChhhHHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEE
Confidence 44566677777788888999999999999999999999999998666789999999999999999999998 98899999
Q ss_pred ecchhhhhhccCCCCCCccccCCCCCCCCCceeecCC
Q 014571 318 KLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 318 ~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaP 354 (422)
.+|+.... ..+.||.|++|.|
T Consensus 168 ~~d~~~~~----------------~~~~fD~Vi~~~~ 188 (275)
T 1yb2_A 168 RSDIADFI----------------SDQMYDAVIADIP 188 (275)
T ss_dssp CSCTTTCC----------------CSCCEEEEEECCS
T ss_pred ECchhccC----------------cCCCccEEEEcCc
Confidence 99986521 1246999999876
No 37
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.05 E-value=1e-09 Score=98.22 Aligned_cols=115 Identities=13% Similarity=0.046 Sum_probs=83.9
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccc
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNM 337 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~ 337 (422)
.+++|.+|||+|||+|..|..+++. .++|+|+|+++.+++.+++++++.|+.++++++.|...+...
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~---------- 85 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHY---------- 85 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGT----------
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhh----------
Confidence 3568999999999999999999987 589999999999999999999999998999999776653211
Q ss_pred cCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEeh
Q 014571 338 CNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 338 ~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
..+.||.|+++.+.--.+. ... ......+.+.|+.+.. |+.+|.++++
T Consensus 86 ----~~~~fD~v~~~~~~~~~~~----------------~~~--~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 86 ----VREPIRAAIFNLGYLPSAD----------------KSV--ITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp ----CCSCEEEEEEEEC-----------------------------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----ccCCcCEEEEeCCCCCCcc----------------hhc--ccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 1356999987642211111 001 1233456677777755 8999998873
No 38
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.05 E-value=8.1e-10 Score=102.21 Aligned_cols=98 Identities=13% Similarity=0.078 Sum_probs=77.7
Q ss_pred EEEeChhH-HHHHHhcC--CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhC-----Ccce
Q 014571 243 IFLQNLPS-IVTAHALD--PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG-----LKCI 314 (422)
Q Consensus 243 ~~~Qd~~S-~lv~~~L~--p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g-----~~nv 314 (422)
..+|++.. ......+. ++++.+|||+|||+|.+|.++++.+++.++|+++|+++.+++.+++++++.| ..++
T Consensus 56 ~~~~~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v 135 (226)
T 1i1n_A 56 ATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRV 135 (226)
T ss_dssp EEECCHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSE
T ss_pred ceecCHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcE
Confidence 34455441 12334454 7899999999999999999999988767899999999999999999999976 4689
Q ss_pred EEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCc
Q 014571 315 TTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 315 ~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPC 355 (422)
.++.+|+..... ..+.||.|+++++|
T Consensus 136 ~~~~~d~~~~~~---------------~~~~fD~i~~~~~~ 161 (226)
T 1i1n_A 136 QLVVGDGRMGYA---------------EEAPYDAIHVGAAA 161 (226)
T ss_dssp EEEESCGGGCCG---------------GGCCEEEEEECSBB
T ss_pred EEEECCcccCcc---------------cCCCcCEEEECCch
Confidence 999999874321 12469999999988
No 39
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.05 E-value=5.2e-10 Score=106.11 Aligned_cols=101 Identities=15% Similarity=0.126 Sum_probs=84.3
Q ss_pred EeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhh
Q 014571 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (422)
Q Consensus 245 ~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~ 323 (422)
++...+++...++...++.+|||+|||+|..|..+|+.+++.++|+++|+++.+++.+++++++.|+. +|+++.+|+..
T Consensus 47 ~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 47 VAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQ 126 (248)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 34666677777767788999999999999999999999876799999999999999999999999986 79999999987
Q ss_pred hhhccCCCCCCccccCCCCCCCCCceeecCCccc
Q 014571 324 AVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLH 357 (422)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg 357 (422)
...... ..+.||.|++|+++..
T Consensus 127 ~l~~~~------------~~~~fD~V~~d~~~~~ 148 (248)
T 3tfw_A 127 SLESLG------------ECPAFDLIFIDADKPN 148 (248)
T ss_dssp HHHTCC------------SCCCCSEEEECSCGGG
T ss_pred HHHhcC------------CCCCeEEEEECCchHH
Confidence 543210 1246999999997655
No 40
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.05 E-value=6e-10 Score=104.45 Aligned_cols=121 Identities=14% Similarity=0.160 Sum_probs=94.6
Q ss_pred ceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEec
Q 014571 241 GEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKL 319 (422)
Q Consensus 241 G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~ 319 (422)
+...+|.....+...++...++.+|||+|||+|..|..+|+.. +.++|+++|+++.+++.+++++++.|+. +++++.+
T Consensus 51 ~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 129 (232)
T 3ntv_A 51 EVPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEG 129 (232)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred CCCCcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC
Confidence 3334566666777777777889999999999999999999954 4689999999999999999999999985 7999999
Q ss_pred chhhhhh-ccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-
Q 014571 320 DALKAVR-RKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG- 397 (422)
Q Consensus 320 Da~~~~~-~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~- 397 (422)
|+..... .. .+.||.|++|+++.. +.++++.+..
T Consensus 130 d~~~~~~~~~--------------~~~fD~V~~~~~~~~------------------------------~~~~l~~~~~~ 165 (232)
T 3ntv_A 130 NALEQFENVN--------------DKVYDMIFIDAAKAQ------------------------------SKKFFEIYTPL 165 (232)
T ss_dssp CGGGCHHHHT--------------TSCEEEEEEETTSSS------------------------------HHHHHHHHGGG
T ss_pred CHHHHHHhhc--------------cCCccEEEEcCcHHH------------------------------HHHHHHHHHHh
Confidence 9976532 11 246999998854222 2345666654
Q ss_pred ceeccEEEe
Q 014571 398 LRIQKVLVL 406 (422)
Q Consensus 398 lr~~~~~~~ 406 (422)
|+.+|++++
T Consensus 166 LkpgG~lv~ 174 (232)
T 3ntv_A 166 LKHQGLVIT 174 (232)
T ss_dssp EEEEEEEEE
T ss_pred cCCCeEEEE
Confidence 799999988
No 41
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.04 E-value=4.1e-10 Score=103.24 Aligned_cols=114 Identities=16% Similarity=0.243 Sum_probs=80.8
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~ 338 (422)
+++|.+|||+|||||++|..+++. .++|+|+|+++.+ ...++.++++|.+........... .
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~~~~~----~ 84 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDDIDRA----L 84 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHHHHHH----H
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHHHHHH----h
Confidence 578999999999999999999987 6899999999752 346899999998764211000000 0
Q ss_pred CCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEe
Q 014571 339 NSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVL 406 (422)
Q Consensus 339 ~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~ 406 (422)
.....+.||.|++|+++..+|. |..... ....++..+|+.+.. ||.+|.+++
T Consensus 85 ~~~~~~~~D~Vlsd~~~~~~g~-------------~~~d~~---~~~~l~~~~l~~a~~~LkpGG~lv~ 137 (191)
T 3dou_A 85 REEGIEKVDDVVSDAMAKVSGI-------------PSRDHA---VSYQIGQRVMEIAVRYLRNGGNVLL 137 (191)
T ss_dssp HHHTCSSEEEEEECCCCCCCSC-------------HHHHHH---HHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hcccCCcceEEecCCCcCCCCC-------------cccCHH---HHHHHHHHHHHHHHHHccCCCEEEE
Confidence 0000136999999999887777 222211 344577888888866 899999997
No 42
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.03 E-value=5.6e-11 Score=107.85 Aligned_cols=131 Identities=15% Similarity=0.086 Sum_probs=68.8
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccC
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCN 339 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~ 339 (422)
.++.+|||+|||+|..+..+++.. +.++|+++|+++.+++.++++++..|. +++++++|+........
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~---------- 96 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLIERA---------- 96 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC--------------------CCHHHHHHHHHHHH----------
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhhhhh----------
Confidence 789999999999999999999985 457999999999999999999999988 89999999987432100
Q ss_pred CCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCccc--chhHHHHHHHHHHhcc-ceeccE-EEe
Q 014571 340 SKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTC--GECGMAQEEINALVVG-LRIQKV-LVL 406 (422)
Q Consensus 340 ~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~--~~l~~~Q~~IL~~a~~-lr~~~~-~~~ 406 (422)
...+.||.|++|+|+...+. +..-+.....+.+..... ..-.....++++.+.. |+.+|. +++
T Consensus 97 -~~~~~fD~i~~npp~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 163 (215)
T 4dzr_A 97 -ERGRPWHAIVSNPPYIPTGE---IDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFL 163 (215)
T ss_dssp -HTTCCBSEEEECCCCCC---------------------------CTTHHHHHHHTCCGGGBCSSSEEEEE
T ss_pred -hccCcccEEEECCCCCCCcc---ccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 01256999999999988776 222222222222211100 0011223677877765 899999 665
No 43
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.03 E-value=8.6e-10 Score=104.03 Aligned_cols=125 Identities=12% Similarity=0.129 Sum_probs=93.8
Q ss_pred EeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhh
Q 014571 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (422)
Q Consensus 245 ~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~ 323 (422)
++...+++...++...++.+|||+|||+|..|..+|+.+++.++|+++|+++.+++.+++++++.|+. +|+++.+|+..
T Consensus 54 ~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 133 (237)
T 3c3y_A 54 TSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAML 133 (237)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 34455566666666677889999999999999999999876799999999999999999999999985 59999999987
Q ss_pred hhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceecc
Q 014571 324 AVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQK 402 (422)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~ 402 (422)
......... ...+.||.|++|+++.. ..++++.+.. ||.+|
T Consensus 134 ~l~~l~~~~--------~~~~~fD~I~~d~~~~~------------------------------~~~~l~~~~~~L~pGG 175 (237)
T 3c3y_A 134 ALDNLLQGQ--------ESEGSYDFGFVDADKPN------------------------------YIKYHERLMKLVKVGG 175 (237)
T ss_dssp HHHHHHHST--------TCTTCEEEEEECSCGGG------------------------------HHHHHHHHHHHEEEEE
T ss_pred HHHHHHhcc--------CCCCCcCEEEECCchHH------------------------------HHHHHHHHHHhcCCCe
Confidence 543211000 00256999999965421 1234555544 79999
Q ss_pred EEEeh
Q 014571 403 VLVLT 407 (422)
Q Consensus 403 ~~~~t 407 (422)
++++.
T Consensus 176 ~lv~d 180 (237)
T 3c3y_A 176 IVAYD 180 (237)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99884
No 44
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.02 E-value=4.9e-10 Score=109.24 Aligned_cols=85 Identities=15% Similarity=0.154 Sum_probs=74.5
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEEEecchhhhhhccCCCCCCccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKAVRRKNESNDEPNM 337 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~~~~~~~~~~~~~~~ 337 (422)
.++|++|||||||+|+.|+++|.. +..+|+|+|+++..++.+++|++..|+.+ ++++++|++.+..
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~----------- 189 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG----------- 189 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-----------
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-----------
Confidence 578999999999999999999986 34689999999999999999999999965 9999999987531
Q ss_pred cCCCCCCCCCceeecCCccccCch
Q 014571 338 CNSKDNNYITSQTSDSMKLHKEVP 361 (422)
Q Consensus 338 ~~~~~~~~FD~VLvDaPCSg~G~l 361 (422)
.+.||+|+.|.|.++...+
T Consensus 190 -----~~~~D~Vi~~~p~~~~~~l 208 (278)
T 3k6r_A 190 -----ENIADRILMGYVVRTHEFI 208 (278)
T ss_dssp -----CSCEEEEEECCCSSGGGGH
T ss_pred -----ccCCCEEEECCCCcHHHHH
Confidence 3568999999999887663
No 45
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.00 E-value=1e-09 Score=103.44 Aligned_cols=94 Identities=14% Similarity=0.106 Sum_probs=80.3
Q ss_pred ChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEEEecchhhhh
Q 014571 247 NLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKAV 325 (422)
Q Consensus 247 d~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~~~ 325 (422)
...+..+...+++++|.+|||+|||+|..+.++++.+++.++|+++|+++.+++.++++++..|+.+ ++++.+|+....
T Consensus 79 ~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 158 (255)
T 3mb5_A 79 PKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGI 158 (255)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCC
T ss_pred HhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhcc
Confidence 3344567778899999999999999999999999997778999999999999999999999999977 999999987431
Q ss_pred hccCCCCCCccccCCCCCCCCCceeecCCcc
Q 014571 326 RRKNESNDEPNMCNSKDNNYITSQTSDSMKL 356 (422)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCS 356 (422)
+ .+.||.|++|+|+.
T Consensus 159 ------~----------~~~~D~v~~~~~~~ 173 (255)
T 3mb5_A 159 ------E----------EENVDHVILDLPQP 173 (255)
T ss_dssp ------C----------CCSEEEEEECSSCG
T ss_pred ------C----------CCCcCEEEECCCCH
Confidence 1 24589999988754
No 46
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.99 E-value=2.4e-09 Score=100.56 Aligned_cols=91 Identities=15% Similarity=0.155 Sum_probs=77.6
Q ss_pred HHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh-CCcceEEEecchhhhhhccC
Q 014571 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM-GLKCITTYKLDALKAVRRKN 329 (422)
Q Consensus 251 ~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~-g~~nv~~~~~Da~~~~~~~~ 329 (422)
..+...+++.+|.+|||++||+|..+..+++.+++.++|+++|+++.+++.++++++.. |..++.+..+|+...+.
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~--- 162 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAEL--- 162 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCC---
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC---
Confidence 45667788999999999999999999999998776789999999999999999999998 87889999999876411
Q ss_pred CCCCCccccCCCCCCCCCceeecCCcc
Q 014571 330 ESNDEPNMCNSKDNNYITSQTSDSMKL 356 (422)
Q Consensus 330 ~~~~~~~~~~~~~~~~FD~VLvDaPCS 356 (422)
..+.||.|++|.|+.
T Consensus 163 ------------~~~~~D~v~~~~~~~ 177 (258)
T 2pwy_A 163 ------------EEAAYDGVALDLMEP 177 (258)
T ss_dssp ------------CTTCEEEEEEESSCG
T ss_pred ------------CCCCcCEEEECCcCH
Confidence 024689999987744
No 47
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.99 E-value=9e-10 Score=107.17 Aligned_cols=139 Identities=14% Similarity=0.063 Sum_probs=95.9
Q ss_pred ceEEEeChhHHHHHHhcC---CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEE
Q 014571 241 GEIFLQNLPSIVTAHALD---PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITT 316 (422)
Q Consensus 241 G~~~~Qd~~S~lv~~~L~---p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~ 316 (422)
|.+..+.....++-.+++ ..++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.+++|+++.|+.+ +++
T Consensus 100 ~~lipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~ 177 (284)
T 1nv8_A 100 GVFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFFV 177 (284)
T ss_dssp TSCCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEE
T ss_pred CceecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEE
Confidence 444444444444444433 347789999999999999999998 56899999999999999999999999976 999
Q ss_pred EecchhhhhhccCCCCCCccccCCCCCCCC---CceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHH
Q 014571 317 YKLDALKAVRRKNESNDEPNMCNSKDNNYI---TSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINA 393 (422)
Q Consensus 317 ~~~Da~~~~~~~~~~~~~~~~~~~~~~~~F---D~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~ 393 (422)
+++|...... +.| |.|+++|||.+.+. .-.++.. |.+........ -..++++
T Consensus 178 ~~~D~~~~~~-----------------~~f~~~D~IvsnPPyi~~~~----~l~~~v~--~ep~~al~~~~--dgl~~~~ 232 (284)
T 1nv8_A 178 RKGEFLEPFK-----------------EKFASIEMILSNPPYVKSSA----HLPKDVL--FEPPEALFGGE--DGLDFYR 232 (284)
T ss_dssp EESSTTGGGG-----------------GGTTTCCEEEECCCCBCGGG----SCTTSCC--CSCHHHHBCTT--TSCHHHH
T ss_pred EECcchhhcc-----------------cccCCCCEEEEcCCCCCccc----ccChhhc--cCcHHHhcCCC--cHHHHHH
Confidence 9999876321 236 99999999998765 1123332 33321100000 0113444
Q ss_pred Hhc--cceeccEEEe
Q 014571 394 LVV--GLRIQKVLVL 406 (422)
Q Consensus 394 ~a~--~lr~~~~~~~ 406 (422)
.+. .++.+|.+++
T Consensus 233 ~i~~~~l~pgG~l~~ 247 (284)
T 1nv8_A 233 EFFGRYDTSGKIVLM 247 (284)
T ss_dssp HHHHHCCCTTCEEEE
T ss_pred HHHHhcCCCCCEEEE
Confidence 444 3678999888
No 48
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.98 E-value=3.8e-09 Score=100.82 Aligned_cols=91 Identities=14% Similarity=0.177 Sum_probs=77.1
Q ss_pred hHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh-C--CcceEEEecchhhhh
Q 014571 249 PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM-G--LKCITTYKLDALKAV 325 (422)
Q Consensus 249 ~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~-g--~~nv~~~~~Da~~~~ 325 (422)
....+...+++++|.+|||+|||+|..+.++++.+++.++|+++|+++.+++.++++++.. | ..++.+..+|+....
T Consensus 87 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 87 DAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 4455667788999999999999999999999998776789999999999999999999998 7 678999999987642
Q ss_pred hccCCCCCCccccCCCCCCCCCceeecCC
Q 014571 326 RRKNESNDEPNMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~FD~VLvDaP 354 (422)
. ..+.||.|++|.|
T Consensus 167 ~---------------~~~~~D~v~~~~~ 180 (280)
T 1i9g_A 167 L---------------PDGSVDRAVLDML 180 (280)
T ss_dssp C---------------CTTCEEEEEEESS
T ss_pred C---------------CCCceeEEEECCc
Confidence 1 0245899999766
No 49
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.97 E-value=2.3e-09 Score=96.68 Aligned_cols=82 Identities=17% Similarity=0.141 Sum_probs=70.3
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccC
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCN 339 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~ 339 (422)
.+|.+|||+|||+|..+..+++. +..+|+++|+++.+++.+++|++..|+.+++++++|+........
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~---------- 110 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGT---------- 110 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCC----------
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhcc----------
Confidence 58899999999999999988874 356899999999999999999999999899999999988753211
Q ss_pred CCCCCCCCceeecCCcc
Q 014571 340 SKDNNYITSQTSDSMKL 356 (422)
Q Consensus 340 ~~~~~~FD~VLvDaPCS 356 (422)
.+.||.|++|+|..
T Consensus 111 ---~~~fD~i~~~~p~~ 124 (189)
T 3p9n_A 111 ---TSPVDLVLADPPYN 124 (189)
T ss_dssp ---SSCCSEEEECCCTT
T ss_pred ---CCCccEEEECCCCC
Confidence 35699999998854
No 50
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.97 E-value=2.8e-09 Score=97.34 Aligned_cols=98 Identities=15% Similarity=0.186 Sum_probs=82.8
Q ss_pred cceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEec
Q 014571 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKL 319 (422)
Q Consensus 240 ~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~ 319 (422)
.|.+..|..........++++++.+|||+|||+|..+.++++. .++|+++|+++.+++.+++++++.|+++++++.+
T Consensus 56 ~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 132 (210)
T 3lbf_A 56 QGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHG 132 (210)
T ss_dssp TSCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCCEeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEEC
Confidence 4556666666667778889999999999999999999999998 4799999999999999999999999999999999
Q ss_pred chhhhhhccCCCCCCccccCCCCCCCCCceeecCCc
Q 014571 320 DALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 320 Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPC 355 (422)
|+...... .+.||.|+++..+
T Consensus 133 d~~~~~~~---------------~~~~D~i~~~~~~ 153 (210)
T 3lbf_A 133 DGWQGWQA---------------RAPFDAIIVTAAP 153 (210)
T ss_dssp CGGGCCGG---------------GCCEEEEEESSBC
T ss_pred CcccCCcc---------------CCCccEEEEccch
Confidence 98764321 3569999997543
No 51
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.96 E-value=3e-09 Score=96.90 Aligned_cols=99 Identities=15% Similarity=0.078 Sum_probs=80.6
Q ss_pred cceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEec
Q 014571 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKL 319 (422)
Q Consensus 240 ~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~ 319 (422)
.|.+. ++.....+...+++++|.+|||+|||+|..+..+++.. +.++|+++|+++.+++.+++++++.|+.+++++.+
T Consensus 20 ~g~~~-~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~ 97 (204)
T 3e05_A 20 KKLIT-KQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEA 97 (204)
T ss_dssp TTTSC-CHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEEC
T ss_pred CCcCC-hHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 46663 44444556677889999999999999999999999984 46899999999999999999999999989999999
Q ss_pred chhhhhhccCCCCCCccccCCCCCCCCCceeecCCc
Q 014571 320 DALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 320 Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPC 355 (422)
|+..... ....||.|+++.+.
T Consensus 98 d~~~~~~---------------~~~~~D~i~~~~~~ 118 (204)
T 3e05_A 98 FAPEGLD---------------DLPDPDRVFIGGSG 118 (204)
T ss_dssp CTTTTCT---------------TSCCCSEEEESCCT
T ss_pred Chhhhhh---------------cCCCCCEEEECCCC
Confidence 9864321 12458999998654
No 52
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.95 E-value=2.7e-09 Score=105.46 Aligned_cols=94 Identities=12% Similarity=0.129 Sum_probs=75.2
Q ss_pred HHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhC-----------CcceEEEe
Q 014571 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG-----------LKCITTYK 318 (422)
Q Consensus 250 S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g-----------~~nv~~~~ 318 (422)
+..+...+++.+|.+|||+|||+|..+..++...++.++|+++|+++.+++.++++++++| ..++++..
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 4556677789999999999999999999999987777899999999999999999999865 36799999
Q ss_pred cchhhhhhccCCCCCCccccCCCCCCCCCceeecCCcc
Q 014571 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKL 356 (422)
Q Consensus 319 ~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCS 356 (422)
+|+....... ..+.||.|++|.|..
T Consensus 174 ~d~~~~~~~~-------------~~~~fD~V~~~~~~~ 198 (336)
T 2b25_A 174 KDISGATEDI-------------KSLTFDAVALDMLNP 198 (336)
T ss_dssp SCTTCCC--------------------EEEEEECSSST
T ss_pred CChHHccccc-------------CCCCeeEEEECCCCH
Confidence 9987642110 124589999987643
No 53
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.95 E-value=2.6e-09 Score=100.00 Aligned_cols=86 Identities=14% Similarity=0.107 Sum_probs=73.1
Q ss_pred hcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc--ceEEEecchhhhhhccCCCCC
Q 014571 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK--CITTYKLDALKAVRRKNESND 333 (422)
Q Consensus 256 ~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~--nv~~~~~Da~~~~~~~~~~~~ 333 (422)
...++++.+|||+|||+|..|..+|+.+++.++|+++|+++.+++.+++++++.|+. +|+++.+|+.......
T Consensus 51 ~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~----- 125 (221)
T 3dr5_A 51 TTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRL----- 125 (221)
T ss_dssp HSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGS-----
T ss_pred hhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHh-----
Confidence 344556669999999999999999998877799999999999999999999999986 7999999998764321
Q ss_pred CccccCCCCCCCCCceeecCC
Q 014571 334 EPNMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 334 ~~~~~~~~~~~~FD~VLvDaP 354 (422)
..+.||.|++|++
T Consensus 126 --------~~~~fD~V~~d~~ 138 (221)
T 3dr5_A 126 --------ANDSYQLVFGQVS 138 (221)
T ss_dssp --------CTTCEEEEEECCC
T ss_pred --------cCCCcCeEEEcCc
Confidence 0356999999874
No 54
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.94 E-value=1.9e-09 Score=103.22 Aligned_cols=141 Identities=14% Similarity=0.082 Sum_probs=95.2
Q ss_pred hhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHH---hCCc-ceEEEecchhh
Q 014571 248 LPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAE---MGLK-CITTYKLDALK 323 (422)
Q Consensus 248 ~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r---~g~~-nv~~~~~Da~~ 323 (422)
.-+.+.+.++...++.+|||+|||+|..+..+++... ..+|+++|+++.+++.+++|++. .|+. +++++++|...
T Consensus 23 ~D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~ 101 (260)
T 2ozv_A 23 MDAMLLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTL 101 (260)
T ss_dssp CHHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTC
T ss_pred cHHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHH
Confidence 4578888889989999999999999999999999853 57999999999999999999998 8886 59999999876
Q ss_pred hhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceecc
Q 014571 324 AVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQK 402 (422)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~ 402 (422)
......... ...+.||.|++++|....+. ...++......... ......++++.+.. |+.+|
T Consensus 102 ~~~~~~~~~--------~~~~~fD~Vv~nPPy~~~~~----~~~~~~~~~~a~~~-----~~~~~~~~l~~~~~~LkpgG 164 (260)
T 2ozv_A 102 RAKARVEAG--------LPDEHFHHVIMNPPYNDAGD----RRTPDALKAEAHAM-----TEGLFEDWIRTASAIMVSGG 164 (260)
T ss_dssp CHHHHHHTT--------CCTTCEEEEEECCCC------------------------------CCHHHHHHHHHHHEEEEE
T ss_pred Hhhhhhhhc--------cCCCCcCEEEECCCCcCCCC----CCCcCHHHHHHhhc-----CcCCHHHHHHHHHHHcCCCC
Confidence 532100000 01356999999999987642 12233211110000 00124567777755 89999
Q ss_pred EEEe
Q 014571 403 VLVL 406 (422)
Q Consensus 403 ~~~~ 406 (422)
.+++
T Consensus 165 ~l~~ 168 (260)
T 2ozv_A 165 QLSL 168 (260)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9887
No 55
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.93 E-value=2.5e-09 Score=98.10 Aligned_cols=95 Identities=13% Similarity=0.069 Sum_probs=76.4
Q ss_pred EeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhh
Q 014571 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (422)
Q Consensus 245 ~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~ 323 (422)
++.....+...++...++.+|||+|||+|..|..+++.+++.++|+++|+++.+++.+++++++.|+. +++++.+|+..
T Consensus 40 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 119 (210)
T 3c3p_A 40 VDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLG 119 (210)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHH
Confidence 34445555555555567889999999999999999998865789999999999999999999999985 59999999976
Q ss_pred hhhccCCCCCCccccCCCCCCCCCceeecCC
Q 014571 324 AVRRKNESNDEPNMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaP 354 (422)
.... ..+ ||.|++|++
T Consensus 120 ~~~~--------------~~~-fD~v~~~~~ 135 (210)
T 3c3p_A 120 IAAG--------------QRD-IDILFMDCD 135 (210)
T ss_dssp HHTT--------------CCS-EEEEEEETT
T ss_pred Hhcc--------------CCC-CCEEEEcCC
Confidence 5311 124 999999843
No 56
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.92 E-value=2.3e-09 Score=103.68 Aligned_cols=85 Identities=15% Similarity=0.142 Sum_probs=72.6
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEEEecchhhhhhccCCCCCCccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKAVRRKNESNDEPNM 337 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~~~~~~~~~~~~~~~ 337 (422)
.++|++|||+|||+|+.+..+|+... .+|+|+|+++.+++.+++|++..|+.+ ++++++|+..+..
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~--~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~----------- 189 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG----------- 189 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-----------
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-----------
Confidence 56899999999999999999998742 279999999999999999999999876 9999999876532
Q ss_pred cCCCCCCCCCceeecCCccccCch
Q 014571 338 CNSKDNNYITSQTSDSMKLHKEVP 361 (422)
Q Consensus 338 ~~~~~~~~FD~VLvDaPCSg~G~l 361 (422)
.+.||.|++|+|++....+
T Consensus 190 -----~~~fD~Vi~~~p~~~~~~l 208 (278)
T 2frn_A 190 -----ENIADRILMGYVVRTHEFI 208 (278)
T ss_dssp -----CSCEEEEEECCCSSGGGGH
T ss_pred -----cCCccEEEECCchhHHHHH
Confidence 3569999999997665543
No 57
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.92 E-value=1.4e-08 Score=90.15 Aligned_cols=89 Identities=13% Similarity=0.079 Sum_probs=75.8
Q ss_pred hhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc--eEEEecchhhhh
Q 014571 248 LPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC--ITTYKLDALKAV 325 (422)
Q Consensus 248 ~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n--v~~~~~Da~~~~ 325 (422)
..+......+.++++.+|||+|||+|..+..+++. ..+|+++|+++.+++.++++++..|+.+ +.++..|.....
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 115 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV 115 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc
Confidence 56667778888889999999999999999999887 5799999999999999999999999987 999999986532
Q ss_pred hccCCCCCCccccCCCCCCCCCceeecCCc
Q 014571 326 RRKNESNDEPNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~FD~VLvDaPC 355 (422)
. .+.||.|++++|-
T Consensus 116 ~----------------~~~~D~v~~~~~~ 129 (194)
T 1dus_A 116 K----------------DRKYNKIITNPPI 129 (194)
T ss_dssp T----------------TSCEEEEEECCCS
T ss_pred c----------------cCCceEEEECCCc
Confidence 1 3468999987653
No 58
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.91 E-value=1.1e-08 Score=94.13 Aligned_cols=115 Identities=9% Similarity=0.048 Sum_probs=85.2
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~ 338 (422)
+.++.+|||+|||+|..+..+|+... .+.|+|+|+++.+++.+++++++.|+.|+.++++|+..+....
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~---------- 107 (214)
T 1yzh_A 39 GNDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYF---------- 107 (214)
T ss_dssp TSCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTS----------
T ss_pred CCCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhc----------
Confidence 35788999999999999999999853 5799999999999999999999999999999999987643111
Q ss_pred CCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEe
Q 014571 339 NSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVL 406 (422)
Q Consensus 339 ~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~ 406 (422)
..+.||.|+++.|..-.. .+-.+. . ..+.++|+.+.. |+.+|++++
T Consensus 108 ---~~~~~D~i~~~~~~~~~~------------~~~~~~-----~--~~~~~~l~~~~~~LkpgG~l~~ 154 (214)
T 1yzh_A 108 ---EDGEIDRLYLNFSDPWPK------------KRHEKR-----R--LTYKTFLDTFKRILPENGEIHF 154 (214)
T ss_dssp ---CTTCCSEEEEESCCCCCS------------GGGGGG-----S--TTSHHHHHHHHHHSCTTCEEEE
T ss_pred ---CCCCCCEEEEECCCCccc------------cchhhh-----c--cCCHHHHHHHHHHcCCCcEEEE
Confidence 134699999986521100 000000 0 125667777655 788888887
No 59
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.90 E-value=3.6e-09 Score=102.02 Aligned_cols=83 Identities=14% Similarity=0.086 Sum_probs=72.8
Q ss_pred hcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCc
Q 014571 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEP 335 (422)
Q Consensus 256 ~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~ 335 (422)
+..+.+|++|||+|||+|..|..+|...+ .++|+|+|+++..++.+++|++..|++|+.++++|+... ..
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~-------- 183 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL-------- 183 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC--------
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc--------
Confidence 44578999999999999999999999853 579999999999999999999999999999999999865 11
Q ss_pred cccCCCCCCCCCceeecCCc
Q 014571 336 NMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 336 ~~~~~~~~~~FD~VLvDaPC 355 (422)
...||.|++|+|.
T Consensus 184 -------~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 184 -------KDVADRVIMGYVH 196 (272)
T ss_dssp -------TTCEEEEEECCCS
T ss_pred -------cCCceEEEECCcc
Confidence 2458999999997
No 60
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.90 E-value=3.4e-09 Score=103.78 Aligned_cols=98 Identities=15% Similarity=0.144 Sum_probs=79.3
Q ss_pred EEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchh
Q 014571 243 IFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (422)
Q Consensus 243 ~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~ 322 (422)
|..+..-...++..+++.++++|||+|||+|..|..+++. .++|+|+|+++.+++.++++++..|..+++++.+|+.
T Consensus 24 fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~ 100 (299)
T 2h1r_A 24 LLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAI 100 (299)
T ss_dssp EECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CC
T ss_pred eecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchh
Confidence 4445556667778889999999999999999999999986 4699999999999999999999888889999999987
Q ss_pred hhhhccCCCCCCccccCCCCCCCCCceeecCCccccCc
Q 014571 323 KAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEV 360 (422)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~ 360 (422)
+.+ ...||.|++|+|+.....
T Consensus 101 ~~~-----------------~~~~D~Vv~n~py~~~~~ 121 (299)
T 2h1r_A 101 KTV-----------------FPKFDVCTANIPYKISSP 121 (299)
T ss_dssp SSC-----------------CCCCSEEEEECCGGGHHH
T ss_pred hCC-----------------cccCCEEEEcCCcccccH
Confidence 542 125899999999987654
No 61
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.89 E-value=4e-10 Score=106.95 Aligned_cols=104 Identities=13% Similarity=0.103 Sum_probs=84.6
Q ss_pred EEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecch
Q 014571 243 IFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDA 321 (422)
Q Consensus 243 ~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da 321 (422)
+.++...+++...++...++.+|||+|||+|..|..+|+.+++.++|+++|+++.+++.+++++++.|+. +|+++.+|+
T Consensus 42 ~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 121 (242)
T 3r3h_A 42 MQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA 121 (242)
T ss_dssp TSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 4456677777777777778899999999999999999999876799999999999999999999999985 799999999
Q ss_pred hhhhhccCCCCCCccccCCCCCCCCCceeecCCc
Q 014571 322 LKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPC 355 (422)
.......... ...+.||.|++|++.
T Consensus 122 ~~~l~~~~~~---------~~~~~fD~V~~d~~~ 146 (242)
T 3r3h_A 122 LDTLHSLLNE---------GGEHQFDFIFIDADK 146 (242)
T ss_dssp HHHHHHHHHH---------HCSSCEEEEEEESCG
T ss_pred HHHHHHHhhc---------cCCCCEeEEEEcCCh
Confidence 8764321000 002569999999763
No 62
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.89 E-value=9.8e-09 Score=94.55 Aligned_cols=87 Identities=18% Similarity=0.244 Sum_probs=73.8
Q ss_pred hHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhhhhhc
Q 014571 249 PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKAVRR 327 (422)
Q Consensus 249 ~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~~~~~ 327 (422)
-...+...+++.+|++|||+|||+|..+..+++. .++|+++|+++.+++.+++++++.|+. ++.++.+|+......
T Consensus 43 ~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~ 119 (204)
T 3njr_A 43 MRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD 119 (204)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT
T ss_pred HHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc
Confidence 3345667788999999999999999999999987 579999999999999999999999998 899999998763211
Q ss_pred cCCCCCCccccCCCCCCCCCceeecC
Q 014571 328 KNESNDEPNMCNSKDNNYITSQTSDS 353 (422)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~FD~VLvDa 353 (422)
...||.|+++.
T Consensus 120 ---------------~~~~D~v~~~~ 130 (204)
T 3njr_A 120 ---------------LPLPEAVFIGG 130 (204)
T ss_dssp ---------------SCCCSEEEECS
T ss_pred ---------------CCCCCEEEECC
Confidence 23589999765
No 63
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.88 E-value=8.2e-09 Score=101.41 Aligned_cols=98 Identities=14% Similarity=0.101 Sum_probs=81.0
Q ss_pred eChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhh
Q 014571 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325 (422)
Q Consensus 246 Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 325 (422)
|..-...+...+++++|++|||+|||+|..+..+++.....++|+++|+++.+++.++++++..|+.++.+..+|+....
T Consensus 60 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~ 139 (317)
T 1dl5_A 60 QPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV 139 (317)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcc
Confidence 33444556677889999999999999999999999986545889999999999999999999999989999999987642
Q ss_pred hccCCCCCCccccCCCCCCCCCceeecCCcccc
Q 014571 326 RRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK 358 (422)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~ 358 (422)
.. .+.||.|+++.++...
T Consensus 140 ~~---------------~~~fD~Iv~~~~~~~~ 157 (317)
T 1dl5_A 140 PE---------------FSPYDVIFVTVGVDEV 157 (317)
T ss_dssp GG---------------GCCEEEEEECSBBSCC
T ss_pred cc---------------CCCeEEEEEcCCHHHH
Confidence 11 2458999999877543
No 64
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.87 E-value=7.5e-09 Score=94.20 Aligned_cols=79 Identities=14% Similarity=0.055 Sum_probs=68.5
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccc
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNM 337 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~ 337 (422)
.+.+|.+|||+|||+|..+..+++. +..+|+++|+++.+++.++++++..|+ +++++++|+..++
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~------------ 110 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL--GAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN------------ 110 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC------------
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC------------
Confidence 5678999999999999999999986 335899999999999999999999888 8999999987631
Q ss_pred cCCCCCCCCCceeecCCccc
Q 014571 338 CNSKDNNYITSQTSDSMKLH 357 (422)
Q Consensus 338 ~~~~~~~~FD~VLvDaPCSg 357 (422)
..||.|++|+|+..
T Consensus 111 ------~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 111 ------SRVDIVIMNPPFGS 124 (207)
T ss_dssp ------CCCSEEEECCCCSS
T ss_pred ------CCCCEEEEcCCCcc
Confidence 25899999999744
No 65
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.87 E-value=1.3e-08 Score=94.23 Aligned_cols=115 Identities=4% Similarity=-0.022 Sum_probs=85.1
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccC
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCN 339 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~ 339 (422)
.++.+|||+|||+|..+..+|+.. +...|+|+|+++.+++.+++++++.|+.|+.++++|+..+....
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~----------- 104 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVF----------- 104 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHC-----------
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhc-----------
Confidence 468899999999999999999985 45799999999999999999999999999999999998754211
Q ss_pred CCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEeh
Q 014571 340 SKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 340 ~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
..+.||.|++..|+. |....-.-.++ .|.++|+.+.. |+.+|.++++
T Consensus 105 --~~~~~d~v~~~~~~p-----------------~~~~~~~~~rl--~~~~~l~~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 105 --EPGEVKRVYLNFSDP-----------------WPKKRHEKRRL--TYSHFLKKYEEVMGKGGSIHFK 152 (213)
T ss_dssp --CTTSCCEEEEESCCC-----------------CCSGGGGGGST--TSHHHHHHHHHHHTTSCEEEEE
T ss_pred --CcCCcCEEEEECCCC-----------------CcCcccccccc--CcHHHHHHHHHHcCCCCEEEEE
Confidence 124589998754431 11100000011 25667777755 7899999884
No 66
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.86 E-value=1.3e-08 Score=102.70 Aligned_cols=119 Identities=13% Similarity=0.077 Sum_probs=87.5
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhhhhccCCCCCCccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVRRKNESNDEPNM 337 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~~~~~~~~~~~~~~ 337 (422)
+++|.+|||+|||+|+.+..+|... ..++|+|+|+++.+++.+++|+++.|+ .++++.++|+...+..
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~---------- 283 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQY---------- 283 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGT----------
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcc----------
Confidence 7899999999999999999999874 346899999999999999999999998 6799999999886421
Q ss_pred cCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhccceeccEEEehhhHHH
Q 014571 338 CNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVGLRIQKVLVLTALIES 412 (422)
Q Consensus 338 ~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~lr~~~~~~~t~~~~~ 412 (422)
.+.||.|++|+|..- ++... ..+..++.++++.+..+--++.+++|..-+.
T Consensus 284 -----~~~fD~Ii~npPyg~---------------r~~~~----~~~~~ly~~~~~~l~r~l~g~~~~i~~~~~~ 334 (373)
T 3tm4_A 284 -----VDSVDFAISNLPYGL---------------KIGKK----SMIPDLYMKFFNELAKVLEKRGVFITTEKKA 334 (373)
T ss_dssp -----CSCEEEEEEECCCC-------------------------CCHHHHHHHHHHHHHHHEEEEEEEEESCHHH
T ss_pred -----cCCcCEEEECCCCCc---------------ccCcc----hhHHHHHHHHHHHHHHHcCCeEEEEECCHHH
Confidence 246899999999632 01111 1355567777777655223444444444333
No 67
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.86 E-value=4.4e-09 Score=96.50 Aligned_cols=80 Identities=13% Similarity=0.062 Sum_probs=67.7
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC--cceEEEecchhhhhhccCCCCCCcccc
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL--KCITTYKLDALKAVRRKNESNDEPNMC 338 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~--~nv~~~~~Da~~~~~~~~~~~~~~~~~ 338 (422)
+|.+|||+|||+|..+..+++. ..++|+++|+|+.+++.+++|++..|+ .+++++++|+.......
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~---------- 120 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR--QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQP---------- 120 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSC----------
T ss_pred CCCeEEEcCCccCHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhh----------
Confidence 7889999999999999987765 236899999999999999999999998 68999999998753210
Q ss_pred CCCCCCC-CCceeecCCc
Q 014571 339 NSKDNNY-ITSQTSDSMK 355 (422)
Q Consensus 339 ~~~~~~~-FD~VLvDaPC 355 (422)
..+. ||.|++|+|.
T Consensus 121 ---~~~~~fD~I~~~~~~ 135 (201)
T 2ift_A 121 ---QNQPHFDVVFLDPPF 135 (201)
T ss_dssp ---CSSCCEEEEEECCCS
T ss_pred ---ccCCCCCEEEECCCC
Confidence 1356 9999999984
No 68
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.85 E-value=7.7e-09 Score=104.14 Aligned_cols=105 Identities=13% Similarity=0.074 Sum_probs=82.3
Q ss_pred ccceEEEeChhHHHHHHhc-CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEE
Q 014571 239 LEGEIFLQNLPSIVTAHAL-DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTY 317 (422)
Q Consensus 239 ~~G~~~~Qd~~S~lv~~~L-~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~ 317 (422)
.++....|+..+.++.... ...+|.+|||+| |+|..+..++.. ++.++|+++|+++.+++.+++|+++.|+.+|+++
T Consensus 149 ~~~~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~ 226 (373)
T 2qm3_A 149 DQAYVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIF 226 (373)
T ss_dssp TCCCBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CCeecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEE
Confidence 4556667777776664432 345789999999 999999998875 4457999999999999999999999998889999
Q ss_pred ecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCcccc
Q 014571 318 KLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK 358 (422)
Q Consensus 318 ~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~ 358 (422)
++|+..... . ...+.||.|++|+||+..
T Consensus 227 ~~D~~~~l~------~-------~~~~~fD~Vi~~~p~~~~ 254 (373)
T 2qm3_A 227 TFDLRKPLP------D-------YALHKFDTFITDPPETLE 254 (373)
T ss_dssp CCCTTSCCC------T-------TTSSCBSEEEECCCSSHH
T ss_pred EChhhhhch------h-------hccCCccEEEECCCCchH
Confidence 999876211 0 013469999999999754
No 69
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.84 E-value=6.5e-09 Score=95.40 Aligned_cols=79 Identities=11% Similarity=0.020 Sum_probs=67.5
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCC
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNS 340 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~ 340 (422)
++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++|++..|+.+++++++|+......
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~------------- 118 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQ------------- 118 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSS-------------
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhh-------------
Confidence 78899999999999999877752 358999999999999999999999998999999999875321
Q ss_pred CCCCCCCceeecCCc
Q 014571 341 KDNNYITSQTSDSMK 355 (422)
Q Consensus 341 ~~~~~FD~VLvDaPC 355 (422)
..+.||.|++|+|.
T Consensus 119 -~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 119 -KGTPHNIVFVDPPF 132 (202)
T ss_dssp -CCCCEEEEEECCSS
T ss_pred -cCCCCCEEEECCCC
Confidence 13469999999983
No 70
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.84 E-value=1.2e-08 Score=92.86 Aligned_cols=87 Identities=18% Similarity=0.155 Sum_probs=71.1
Q ss_pred HHHHHHhcC--CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhc
Q 014571 250 SIVTAHALD--PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR 327 (422)
Q Consensus 250 S~lv~~~L~--p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~ 327 (422)
+..+...+. ++++.+|||+|||+|..+..+++. +.++|+++|+++.+++.++++++..|+.++++..+|.....
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-- 122 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV-- 122 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC--
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC--
Confidence 344444554 678999999999999999998875 34699999999999999999999999988999999976421
Q ss_pred cCCCCCCccccCCCCCCCCCceeecCCc
Q 014571 328 KNESNDEPNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~FD~VLvDaPC 355 (422)
.+.||.|+++.+.
T Consensus 123 ---------------~~~fD~i~~~~~~ 135 (205)
T 3grz_A 123 ---------------DGKFDLIVANILA 135 (205)
T ss_dssp ---------------CSCEEEEEEESCH
T ss_pred ---------------CCCceEEEECCcH
Confidence 2568999997643
No 71
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.83 E-value=1.8e-08 Score=101.99 Aligned_cols=122 Identities=14% Similarity=0.040 Sum_probs=94.4
Q ss_pred eChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc---ceEEEecchh
Q 014571 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK---CITTYKLDAL 322 (422)
Q Consensus 246 Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~---nv~~~~~Da~ 322 (422)
.|..+.+....+.+.++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.+++|++..|+. +++++..|..
T Consensus 207 ~d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~ 285 (375)
T 4dcm_A 207 LDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 285 (375)
T ss_dssp CCHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTT
T ss_pred ccHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhh
Confidence 36677888888988899999999999999999999984 4579999999999999999999999975 5888999986
Q ss_pred hhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceec
Q 014571 323 KAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQ 401 (422)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~ 401 (422)
... ..+.||.|++|+|...... .... ...++++.+.. |+.+
T Consensus 286 ~~~----------------~~~~fD~Ii~nppfh~~~~--------------~~~~--------~~~~~l~~~~~~Lkpg 327 (375)
T 4dcm_A 286 SGV----------------EPFRFNAVLCNPPFHQQHA--------------LTDN--------VAWEMFHHARRCLKIN 327 (375)
T ss_dssp TTC----------------CTTCEEEEEECCCC---------------------CC--------HHHHHHHHHHHHEEEE
T ss_pred ccC----------------CCCCeeEEEECCCcccCcc--------------cCHH--------HHHHHHHHHHHhCCCC
Confidence 521 1356999999999743222 1111 22357777765 8999
Q ss_pred cEEEe
Q 014571 402 KVLVL 406 (422)
Q Consensus 402 ~~~~~ 406 (422)
|.+++
T Consensus 328 G~l~i 332 (375)
T 4dcm_A 328 GELYI 332 (375)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99888
No 72
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.83 E-value=4.1e-09 Score=97.47 Aligned_cols=97 Identities=15% Similarity=0.087 Sum_probs=76.5
Q ss_pred hHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhhhhc
Q 014571 249 PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVRR 327 (422)
Q Consensus 249 ~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~~~~ 327 (422)
...+...++...++.+|||+|||+|..|..+++.+++.++|+++|+++.+++.+++++++.|+ .+++++.+|+......
T Consensus 57 ~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~ 136 (229)
T 2avd_A 57 QAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDE 136 (229)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHH
Confidence 334455555567889999999999999999999886678999999999999999999999998 5799999999765322
Q ss_pred cCCCCCCccccCCCCCCCCCceeecCC
Q 014571 328 KNESNDEPNMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~FD~VLvDaP 354 (422)
.... ...+.||.|++|++
T Consensus 137 ~~~~---------~~~~~~D~v~~d~~ 154 (229)
T 2avd_A 137 LLAA---------GEAGTFDVAVVDAD 154 (229)
T ss_dssp HHHT---------TCTTCEEEEEECSC
T ss_pred HHhc---------CCCCCccEEEECCC
Confidence 1100 00146999999876
No 73
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.83 E-value=1.6e-08 Score=94.50 Aligned_cols=116 Identities=16% Similarity=0.124 Sum_probs=85.9
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccC
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCN 339 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~ 339 (422)
.++.+|||+|||+|..+..+|+.. +...|+|+|+++.+++.+++++++.|++|++++++|+.......-
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~---------- 101 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMI---------- 101 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHS----------
T ss_pred CCCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHc----------
Confidence 478899999999999999999875 457999999999999999999999999999999999988532110
Q ss_pred CCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEeh
Q 014571 340 SKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 340 ~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
..+.||.|++..|..-.-. ++ + .... .|.++++.+.. |+.+|++++.
T Consensus 102 --~~~~~d~v~~~~~~p~~~~-----~~------~-~rr~-------~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 102 --PDNSLRMVQLFFPDPWHKA-----RH------N-KRRI-------VQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp --CTTCEEEEEEESCCCCCSG-----GG------G-GGSS-------CSHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCCChheEEEeCCCCccch-----hh------h-hhhh-------hhHHHHHHHHHHcCCCcEEEEE
Confidence 1356899988644321111 00 0 0001 23567777765 8999999883
No 74
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.81 E-value=1.7e-08 Score=93.28 Aligned_cols=93 Identities=12% Similarity=0.117 Sum_probs=74.4
Q ss_pred HHHhc--CCCCCCeEEEecCCCChhHHHHHhccC----CCcEEEEEcCChHHHHHHHHHHHHhC-----CcceEEEecch
Q 014571 253 TAHAL--DPQKGERILDMCAAPGGKTTAIASLLR----DEGEVVAVDRSHNKVMDIQKLAAEMG-----LKCITTYKLDA 321 (422)
Q Consensus 253 v~~~L--~p~pg~~VLD~CAgpGgKT~~la~l~~----~~g~V~A~D~s~~rl~~l~~~l~r~g-----~~nv~~~~~Da 321 (422)
....+ .++++.+|||+|||+|..+.++++..+ +.++|+++|+++.+++.+++++++.| ..++.++.+|+
T Consensus 70 ~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 149 (227)
T 2pbf_A 70 SLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI 149 (227)
T ss_dssp HHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG
T ss_pred HHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh
Confidence 34445 578999999999999999999999875 56799999999999999999999998 67899999998
Q ss_pred hhhhhccCCCCCCccccCCCCCCCCCceeecCCcc
Q 014571 322 LKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKL 356 (422)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCS 356 (422)
........ ...+.||.|++++++.
T Consensus 150 ~~~~~~~~-----------~~~~~fD~I~~~~~~~ 173 (227)
T 2pbf_A 150 YQVNEEEK-----------KELGLFDAIHVGASAS 173 (227)
T ss_dssp GGCCHHHH-----------HHHCCEEEEEECSBBS
T ss_pred HhcccccC-----------ccCCCcCEEEECCchH
Confidence 76320000 0024589999987764
No 75
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.81 E-value=1.7e-08 Score=99.21 Aligned_cols=81 Identities=14% Similarity=0.018 Sum_probs=67.8
Q ss_pred HhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCC
Q 014571 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDE 334 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~ 334 (422)
.++++++|++|||++||||+.|..++... ..++|+++|+++.+++.+++++++.|+.+|+++++|+..++
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--------- 185 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--------- 185 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG---------
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC---------
Confidence 36789999999999999999886554432 25799999999999999999999999988999999998753
Q ss_pred ccccCCCCCCCCCceeecC
Q 014571 335 PNMCNSKDNNYITSQTSDS 353 (422)
Q Consensus 335 ~~~~~~~~~~~FD~VLvDa 353 (422)
.+.||.|++++
T Consensus 186 --------d~~FDvV~~~a 196 (298)
T 3fpf_A 186 --------GLEFDVLMVAA 196 (298)
T ss_dssp --------GCCCSEEEECT
T ss_pred --------CCCcCEEEECC
Confidence 24589999743
No 76
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.81 E-value=8.5e-09 Score=98.03 Aligned_cols=105 Identities=13% Similarity=0.063 Sum_probs=82.0
Q ss_pred EEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchh
Q 014571 244 FLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDAL 322 (422)
Q Consensus 244 ~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~ 322 (422)
.++....++...++...++.+|||+|||+|..|..+|+.+.+.++|+++|+++.+++.+++++++.|+ .+|+++.+|+.
T Consensus 62 ~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~ 141 (247)
T 1sui_A 62 TTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPAL 141 (247)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHH
Confidence 34555566666666667788999999999999999999987678999999999999999999999998 46999999998
Q ss_pred hhhhccCCCCCCccccCCCCCCCCCceeecCCcc
Q 014571 323 KAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKL 356 (422)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCS 356 (422)
.......... ...+.||.|++|+++.
T Consensus 142 ~~l~~l~~~~--------~~~~~fD~V~~d~~~~ 167 (247)
T 1sui_A 142 PVLDEMIKDE--------KNHGSYDFIFVDADKD 167 (247)
T ss_dssp HHHHHHHHSG--------GGTTCBSEEEECSCST
T ss_pred HHHHHHHhcc--------CCCCCEEEEEEcCchH
Confidence 7532110000 0025699999998754
No 77
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.81 E-value=1.9e-08 Score=96.61 Aligned_cols=78 Identities=12% Similarity=0.199 Sum_probs=65.1
Q ss_pred EeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCC-CcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchh
Q 014571 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDAL 322 (422)
Q Consensus 245 ~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~-~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~ 322 (422)
+++....++... ++||.+|||++||+|..|..+++.... ..+|+|+|+|+.+++.++++++..+. .+|+++++|..
T Consensus 56 ~~~~i~~l~~~~--~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~ 133 (261)
T 4gek_A 56 IISMIGMLAERF--VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIR 133 (261)
T ss_dssp HHHHHHHHHHHH--CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTT
T ss_pred HHHHHHHHHHHh--CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccc
Confidence 345555555555 478999999999999999999998754 45999999999999999999999886 47999999987
Q ss_pred hh
Q 014571 323 KA 324 (422)
Q Consensus 323 ~~ 324 (422)
.+
T Consensus 134 ~~ 135 (261)
T 4gek_A 134 DI 135 (261)
T ss_dssp TC
T ss_pred cc
Confidence 64
No 78
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.80 E-value=1e-08 Score=92.67 Aligned_cols=121 Identities=14% Similarity=0.095 Sum_probs=79.3
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCC-CcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhc-cCCCCCCcc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRR-KNESNDEPN 336 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~-~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~-~~~~~~~~~ 336 (422)
+++|.+|||+|||||+.|..+++.+++ .++|+|+|+++.. ...+++++++|....... ....++...
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC--------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhcccccccc
Confidence 578999999999999999999998754 6899999999831 246789999998764310 000000000
Q ss_pred cc--------CC-CCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEe
Q 014571 337 MC--------NS-KDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVL 406 (422)
Q Consensus 337 ~~--------~~-~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~ 406 (422)
.. .. ...+.||.|++|.++...|. |.... .....+|.++|+.+.. |+.+|.+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~-------------~~~d~---~~~~~~~~~~l~~~~~~LkpgG~lv~ 152 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDAAVPCIGN-------------KIDDH---LNSCELTLSITHFMEQYINIGGTYIV 152 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECCCCCCCSC-------------HHHHH---HHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCCCcCCCCC-------------cccCH---HHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 00 00 01357999999876554444 11111 1334567788888865 899999998
No 79
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.80 E-value=9.8e-09 Score=105.14 Aligned_cols=83 Identities=11% Similarity=0.075 Sum_probs=70.0
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh--CCcceEEEecchhhhhhccCCCCCCccc
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GLKCITTYKLDALKAVRRKNESNDEPNM 337 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~--g~~nv~~~~~Da~~~~~~~~~~~~~~~~ 337 (422)
++|.+|||+|||+|..+..+++. .++|+++|+++.+++.+++|++.+ |+.+++++++|+..+....
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~--------- 159 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLI--------- 159 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHH---------
T ss_pred CCCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhc---------
Confidence 35999999999999999999886 369999999999999999999999 9989999999998753211
Q ss_pred cCCCCCCCCCceeecCCcccc
Q 014571 338 CNSKDNNYITSQTSDSMKLHK 358 (422)
Q Consensus 338 ~~~~~~~~FD~VLvDaPCSg~ 358 (422)
....||.|++|||..+.
T Consensus 160 ----~~~~fDvV~lDPPrr~~ 176 (410)
T 3ll7_A 160 ----KTFHPDYIYVDPARRSG 176 (410)
T ss_dssp ----HHHCCSEEEECCEEC--
T ss_pred ----cCCCceEEEECCCCcCC
Confidence 02358999999999885
No 80
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.80 E-value=1.6e-08 Score=93.88 Aligned_cols=81 Identities=26% Similarity=0.277 Sum_probs=65.1
Q ss_pred cCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcc
Q 014571 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPN 336 (422)
Q Consensus 257 L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~ 336 (422)
+.+++|++|||+|||+|..|.++++..+ .++|+|+|+|+.+++.+.+++++. .|+.++.+|+...... .
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~---~----- 121 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKY---S----- 121 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGT---T-----
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhh---c-----
Confidence 4578999999999999999999999876 689999999999998888877764 5788888888753210 0
Q ss_pred ccCCCCCCCCCceeec
Q 014571 337 MCNSKDNNYITSQTSD 352 (422)
Q Consensus 337 ~~~~~~~~~FD~VLvD 352 (422)
...+.||.|++|
T Consensus 122 ----~~~~~fD~V~~~ 133 (210)
T 1nt2_A 122 ----GIVEKVDLIYQD 133 (210)
T ss_dssp ----TTCCCEEEEEEC
T ss_pred ----ccccceeEEEEe
Confidence 012569999987
No 81
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.79 E-value=1.8e-08 Score=89.36 Aligned_cols=81 Identities=21% Similarity=0.176 Sum_probs=69.3
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhhhhhccCCCCCCccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKAVRRKNESNDEPNM 337 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~~~~~~~~~~~~~~~ 337 (422)
..++.+|||+|||+|..+..+++. +..+|+++|+++.+++.++++++..|+. ++.++.+|+.......
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~--------- 97 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL--------- 97 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB---------
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh---------
Confidence 568899999999999999999986 3479999999999999999999999985 7999999998753211
Q ss_pred cCCCCCCCCCceeecCCc
Q 014571 338 CNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 338 ~~~~~~~~FD~VLvDaPC 355 (422)
.+.||.|++|+|.
T Consensus 98 -----~~~fD~i~~~~~~ 110 (177)
T 2esr_A 98 -----TGRFDLVFLDPPY 110 (177)
T ss_dssp -----CSCEEEEEECCSS
T ss_pred -----cCCCCEEEECCCC
Confidence 2358999999886
No 82
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.79 E-value=2.7e-08 Score=87.66 Aligned_cols=90 Identities=18% Similarity=0.133 Sum_probs=75.5
Q ss_pred eChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhh
Q 014571 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325 (422)
Q Consensus 246 Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 325 (422)
++.-...+...+.+.++.+|||+|||+|..+..+++ +..+|+++|+++.+++.++++++..|+++++++++|.....
T Consensus 20 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~ 96 (183)
T 2yxd_A 20 KEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVL 96 (183)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHG
T ss_pred HHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccc
Confidence 333344556667888999999999999999999998 46799999999999999999999999988999999988632
Q ss_pred hccCCCCCCccccCCCCCCCCCceeecCC
Q 014571 326 RRKNESNDEPNMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~FD~VLvDaP 354 (422)
. .+.||.|+++.+
T Consensus 97 ~----------------~~~~D~i~~~~~ 109 (183)
T 2yxd_A 97 D----------------KLEFNKAFIGGT 109 (183)
T ss_dssp G----------------GCCCSEEEECSC
T ss_pred c----------------CCCCcEEEECCc
Confidence 1 135899999988
No 83
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.79 E-value=4.1e-08 Score=86.57 Aligned_cols=99 Identities=16% Similarity=0.164 Sum_probs=75.2
Q ss_pred cceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEe
Q 014571 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYK 318 (422)
Q Consensus 240 ~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~ 318 (422)
+|.+..++... .+...+.++++.+|||+|||+|..+.++++.. +.++|+++|+++.+++.+++++++.|+. ++ ++.
T Consensus 5 ~g~~t~~~~~~-~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~ 81 (178)
T 3hm2_A 5 DGQLTKQHVRA-LAISALAPKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQ 81 (178)
T ss_dssp -CCSHHHHHHH-HHHHHHCCCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEE
T ss_pred CCcccHHHHHH-HHHHHhcccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEe
Confidence 34444444443 34556688999999999999999999999886 4589999999999999999999999987 88 888
Q ss_pred cchhhhhhccCCCCCCccccCCCCCCCCCceeecCCc
Q 014571 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 319 ~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPC 355 (422)
.|+...... ..+.||.|+++.+.
T Consensus 82 ~d~~~~~~~--------------~~~~~D~i~~~~~~ 104 (178)
T 3hm2_A 82 QGAPRAFDD--------------VPDNPDVIFIGGGL 104 (178)
T ss_dssp CCTTGGGGG--------------CCSCCSEEEECC-T
T ss_pred cchHhhhhc--------------cCCCCCEEEECCcc
Confidence 887542210 12569999975444
No 84
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.79 E-value=2.1e-08 Score=94.54 Aligned_cols=117 Identities=11% Similarity=0.068 Sum_probs=84.1
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh--------CCcceEEEecchhhhhhccCC
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--------GLKCITTYKLDALKAVRRKNE 330 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~--------g~~nv~~~~~Da~~~~~~~~~ 330 (422)
+.++.+|||+|||+|+.+..+|+.. +.+.|+|+|+|+.+++.++++++.. |+.|+.++.+|+.......
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~-- 123 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNF-- 123 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGT--
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHh--
Confidence 4578899999999999999999985 4579999999999999999999987 8889999999998632210
Q ss_pred CCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEeh
Q 014571 331 SNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 331 ~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
. ..+.||.|++..|..-... ++ ..... .|.++|+.+.. |+.+|.++++
T Consensus 124 ~----------~~~~~d~v~~~~p~p~~k~-----~~-------~~~r~-------~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 124 F----------EKGQLSKMFFCFPDPHFKQ-----RK-------HKARI-------ITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp S----------CTTCEEEEEEESCCCC------------------CSSC-------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred c----------cccccCEEEEECCCccccc-----ch-------hHHhh-------ccHHHHHHHHHHcCCCCEEEEE
Confidence 0 1345788876554422111 00 00111 24677777755 8999999884
No 85
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.78 E-value=1.9e-08 Score=94.09 Aligned_cols=90 Identities=17% Similarity=0.162 Sum_probs=78.3
Q ss_pred EeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 245 ~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
-|++.+...+..++++++.+|||++||+|..+..+++.. .+|+++|+++.+++.++++++..|++++.++++|+...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 81 (239)
T 1xxl_A 5 HHHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL 81 (239)
T ss_dssp -CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC
T ss_pred ccCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccC
Confidence 478899999999999999999999999999999999873 58999999999999999999999999999999998654
Q ss_pred hhccCCCCCCccccCCCCCCCCCceeec
Q 014571 325 VRRKNESNDEPNMCNSKDNNYITSQTSD 352 (422)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~FD~VLvD 352 (422)
+. ..+.||.|++.
T Consensus 82 ~~---------------~~~~fD~v~~~ 94 (239)
T 1xxl_A 82 PF---------------PDDSFDIITCR 94 (239)
T ss_dssp CS---------------CTTCEEEEEEE
T ss_pred CC---------------CCCcEEEEEEC
Confidence 21 13568999873
No 86
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.78 E-value=3.3e-08 Score=90.41 Aligned_cols=101 Identities=13% Similarity=0.144 Sum_probs=79.7
Q ss_pred cceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEec
Q 014571 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKL 319 (422)
Q Consensus 240 ~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~ 319 (422)
.|....+..-.......+.+.++.+|||++||+|..+..+++..++.++|+++|+++.+++.++++++..|+.++.+..+
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 135 (215)
T 2yxe_A 56 YGQTISAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVG 135 (215)
T ss_dssp TTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEES
T ss_pred CCcEeCcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 34444443334455667788999999999999999999999987656899999999999999999999999989999999
Q ss_pred chhhhhhccCCCCCCccccCCCCCCCCCceeecCCc
Q 014571 320 DALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 320 Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPC 355 (422)
|+..... ..+.||.|+++.+.
T Consensus 136 d~~~~~~---------------~~~~fD~v~~~~~~ 156 (215)
T 2yxe_A 136 DGTLGYE---------------PLAPYDRIYTTAAG 156 (215)
T ss_dssp CGGGCCG---------------GGCCEEEEEESSBB
T ss_pred CcccCCC---------------CCCCeeEEEECCch
Confidence 9853211 12468999986544
No 87
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.77 E-value=1.3e-08 Score=94.43 Aligned_cols=100 Identities=14% Similarity=0.105 Sum_probs=77.6
Q ss_pred ceEEEeChhHHHHHHhc--CCCCCCeEEEecCCCChhHHHHHhccCC-----CcEEEEEcCChHHHHHHHHHHHHhC---
Q 014571 241 GEIFLQNLPSIVTAHAL--DPQKGERILDMCAAPGGKTTAIASLLRD-----EGEVVAVDRSHNKVMDIQKLAAEMG--- 310 (422)
Q Consensus 241 G~~~~Qd~~S~lv~~~L--~p~pg~~VLD~CAgpGgKT~~la~l~~~-----~g~V~A~D~s~~rl~~l~~~l~r~g--- 310 (422)
|....|..-.......+ .+++|.+|||+|||+|..|.++++.++. .++|+++|+++.+++.+++++++.|
T Consensus 62 ~~~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~ 141 (227)
T 1r18_A 62 GVTISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSM 141 (227)
T ss_dssp TEEECCHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred CCccCChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccc
Confidence 33333444334455666 4789999999999999999999997643 3699999999999999999999887
Q ss_pred --CcceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCc
Q 014571 311 --LKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 311 --~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPC 355 (422)
..++.++.+|+..... ..+.||.|++++++
T Consensus 142 ~~~~~v~~~~~d~~~~~~---------------~~~~fD~I~~~~~~ 173 (227)
T 1r18_A 142 LDSGQLLIVEGDGRKGYP---------------PNAPYNAIHVGAAA 173 (227)
T ss_dssp HHHTSEEEEESCGGGCCG---------------GGCSEEEEEECSCB
T ss_pred cCCCceEEEECCcccCCC---------------cCCCccEEEECCch
Confidence 6789999999875211 12468999998776
No 88
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.76 E-value=1.2e-08 Score=96.33 Aligned_cols=124 Identities=15% Similarity=0.082 Sum_probs=87.7
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHh---CCcc--------------------
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEM---GLKC-------------------- 313 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~---g~~n-------------------- 313 (422)
...++.+|||+|||+|..+..+++.+ .+..+|+|+|+++.+++.+++++... |+.+
T Consensus 48 ~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (250)
T 1o9g_A 48 PGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEA 127 (250)
T ss_dssp SCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred ccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhh
Confidence 33467899999999999999999873 23478999999999999999998877 5533
Q ss_pred ------eE-------------EEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccc
Q 014571 314 ------IT-------------TYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSC 374 (422)
Q Consensus 314 ------v~-------------~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w 374 (422)
+. +.++|.......... .....||.|++++|...... +
T Consensus 128 ~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~----------~~~~~fD~Iv~npp~~~~~~---~---------- 184 (250)
T 1o9g_A 128 AQAARRLRERLTAEGGALPCAIRTADVFDPRALSAV----------LAGSAPDVVLTDLPYGERTH---W---------- 184 (250)
T ss_dssp HHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHH----------HTTCCCSEEEEECCGGGSSS---S----------
T ss_pred hhhhhhhhhhccccccccccceeecccccccccccc----------cCCCCceEEEeCCCeecccc---c----------
Confidence 66 888887653210000 01236999999999876544 1
Q ss_pred cccCcccchhHHHHHHHHHHhcc-ceeccEEEehhh
Q 014571 375 KEKGRTCGECGMAQEEINALVVG-LRIQKVLVLTAL 409 (422)
Q Consensus 375 ~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t~~ 409 (422)
... .-...+..+++++.. |+.+|.++++..
T Consensus 185 ~~~-----~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 185 EGQ-----VPGQPVAGLLRSLASALPAHAVIAVTDR 215 (250)
T ss_dssp SSC-----CCHHHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred ccc-----ccccHHHHHHHHHHHhcCCCcEEEEeCc
Confidence 111 123456677777755 899999998544
No 89
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.76 E-value=5.7e-09 Score=103.73 Aligned_cols=123 Identities=14% Similarity=-0.042 Sum_probs=89.5
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCC----cEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCC
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDE----GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~----g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~ 333 (422)
++.++.+|||.|||+|+.+..+++.+... ..|+|+|+++..++.++.|+...|+ ++.++++|+....
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~-------- 197 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANL-------- 197 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCC--------
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCcc--------
Confidence 67788999999999999999999887533 7999999999999999999999888 6889999976421
Q ss_pred CccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEe
Q 014571 334 EPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVL 406 (422)
Q Consensus 334 ~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~ 406 (422)
....||.|+.++|......-. . ..+|.+... ......+..++.++.. |+.+|.+++
T Consensus 198 --------~~~~fD~Ii~NPPfg~~~~~~-~------~~~~~~~~~--~g~~~~~~~~l~~~~~~Lk~gG~~~~ 254 (344)
T 2f8l_A 198 --------LVDPVDVVISDLPVGYYPDDE-N------AKTFELCRE--EGHSFAHFLFIEQGMRYTKPGGYLFF 254 (344)
T ss_dssp --------CCCCEEEEEEECCCSEESCHH-H------HTTSTTCCS--SSCEEHHHHHHHHHHHTEEEEEEEEE
T ss_pred --------ccCCccEEEECCCCCCcCchh-h------hhhccccCC--CCcchHHHHHHHHHHHHhCCCCEEEE
Confidence 134699999999974322201 1 122333211 1223366777777754 788887776
No 90
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.74 E-value=6.6e-08 Score=90.54 Aligned_cols=111 Identities=17% Similarity=0.136 Sum_probs=85.0
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhhhhhccCC
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKAVRRKNE 330 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~~~~~~~~ 330 (422)
.+...+.+.+|.+|||++||+|..+..+++.. ..+|+++|+++.+++.++++++..|+. ++.++++|+...+.
T Consensus 27 ~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~---- 100 (256)
T 1nkv_A 27 TLGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA---- 100 (256)
T ss_dssp HHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC----
T ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc----
Confidence 34556778999999999999999999999886 358999999999999999999999985 79999999876421
Q ss_pred CCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEeh
Q 014571 331 SNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 331 ~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
.+.||.|++ .+.+. +.+. ..++|+++.. |+.+|.++++
T Consensus 101 ------------~~~fD~V~~------~~~~~-----------~~~~----------~~~~l~~~~r~LkpgG~l~~~ 139 (256)
T 1nkv_A 101 ------------NEKCDVAAC------VGATW-----------IAGG----------FAGAEELLAQSLKPGGIMLIG 139 (256)
T ss_dssp ------------SSCEEEEEE------ESCGG-----------GTSS----------SHHHHHHHTTSEEEEEEEEEE
T ss_pred ------------CCCCCEEEE------CCChH-----------hcCC----------HHHHHHHHHHHcCCCeEEEEe
Confidence 246899987 22211 1111 1345666655 7999999985
No 91
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.74 E-value=2.5e-08 Score=95.11 Aligned_cols=81 Identities=21% Similarity=0.156 Sum_probs=68.8
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~ 338 (422)
+.++.+|||+|||+|..+..+|... +.++|+++|+++++++.++++++++|+.||+++++|+..+....
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~---------- 146 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREA---------- 146 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTST----------
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhccc----------
Confidence 3678999999999999999999875 46899999999999999999999999999999999998764210
Q ss_pred CCCCCCCCCceeec
Q 014571 339 NSKDNNYITSQTSD 352 (422)
Q Consensus 339 ~~~~~~~FD~VLvD 352 (422)
...+.||.|++.
T Consensus 147 --~~~~~fD~I~s~ 158 (249)
T 3g89_A 147 --GHREAYARAVAR 158 (249)
T ss_dssp --TTTTCEEEEEEE
T ss_pred --ccCCCceEEEEC
Confidence 013579999974
No 92
>3r90_A Malignant T cell-amplified sequence 1; structural genomics consortium, surface entropy reduction, S binding protein; 1.70A {Homo sapiens}
Probab=98.73 E-value=6e-09 Score=96.00 Aligned_cols=74 Identities=20% Similarity=0.282 Sum_probs=66.4
Q ss_pred CCCEEEEccccHHHHHcCCccccCceeeccC---CccCCCEEEEeeccccccCCCCchhhhhhhcccCCCCCCCcccCCC
Q 014571 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSS---HVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERS 198 (422)
Q Consensus 122 ~~k~ViVd~~~~eaVlrGA~v~~PGil~~~~---~~~~gd~V~v~~~l~~~~~~p~W~~~~~r~~~~~~~~~~~~~~~~~ 198 (422)
..+.|+||+++.+++++||++|+|||+.+.. ++++||.|+|.. +.+
T Consensus 91 ~lp~v~Vd~~av~~v~~GA~Lm~PGv~~~~~~~~~i~~Gd~V~V~~-------------------------------~~~ 139 (188)
T 3r90_A 91 ILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKLYPAAVDTIVAIMA-------------------------------AGA 139 (188)
T ss_dssp GSCEEEECGGGHHHHTTTCCEETHHHHSTTCBCCCCCTTCEEEEEE-------------------------------TTC
T ss_pred cCCEEEEChhHHHHhhcCCccccCeEEccCCCcccccCCCEEEEEE-------------------------------CCC
Confidence 3578999999999999999999999999986 799999999993 335
Q ss_pred ceEEEEccCccCHHHHhcccCcceeecc
Q 014571 199 GLYIGQGTAMMSRAGIFRASEGIAVDMH 226 (422)
Q Consensus 199 ~v~Vrvg~a~msreel~~~~~GiaV~~~ 226 (422)
+..+++|++.||.+++.+..+|++++..
T Consensus 140 ~~~vAVG~a~mss~e~~~~~kG~aV~v~ 167 (188)
T 3r90_A 140 AHALCVGVMKMSAEDIEKVNKGIGIENI 167 (188)
T ss_dssp SSCSEEEEESSCHHHHHHHCCSEEEEEE
T ss_pred CcEEEEEEEEeCHHHHhhcCCcEEEEEE
Confidence 6789999999999999988999999865
No 93
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.72 E-value=3.4e-08 Score=93.09 Aligned_cols=88 Identities=9% Similarity=-0.013 Sum_probs=68.8
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEEEecchhhh-hhccCCCCCCcccc
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKA-VRRKNESNDEPNMC 338 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~~-~~~~~~~~~~~~~~ 338 (422)
++.+|||+|||+|..+..+++... .++|+++|+++.+++.++++++..|+.+ ++++++|+... .... +.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~---~~----- 135 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDAL---KE----- 135 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTS---TT-----
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhh---hc-----
Confidence 578999999999999999998753 4799999999999999999999999875 99999997652 1100 00
Q ss_pred CCCCCCCCCceeecCCccccC
Q 014571 339 NSKDNNYITSQTSDSMKLHKE 359 (422)
Q Consensus 339 ~~~~~~~FD~VLvDaPCSg~G 359 (422)
...+.||.|++++|+...+
T Consensus 136 --~~~~~fD~i~~npp~~~~~ 154 (254)
T 2h00_A 136 --ESEIIYDFCMCNPPFFANQ 154 (254)
T ss_dssp --CCSCCBSEEEECCCCC---
T ss_pred --ccCCcccEEEECCCCccCc
Confidence 0014699999999998765
No 94
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.71 E-value=4.6e-08 Score=85.54 Aligned_cols=81 Identities=19% Similarity=0.097 Sum_probs=67.1
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCC
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNS 340 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~ 340 (422)
++.+|||+|||+|..+..+++.. ..|+++|+++.+++.++++++..++ +++++++|+.........
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~---------- 106 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG---WEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAKA---------- 106 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT---CEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHHH----------
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhhc----------
Confidence 78899999999999999999873 2499999999999999999999998 899999999875321110
Q ss_pred CCCCCCCceeecCCcc
Q 014571 341 KDNNYITSQTSDSMKL 356 (422)
Q Consensus 341 ~~~~~FD~VLvDaPCS 356 (422)
....||.|++|+|..
T Consensus 107 -~~~~~D~i~~~~~~~ 121 (171)
T 1ws6_A 107 -QGERFTVAFMAPPYA 121 (171)
T ss_dssp -TTCCEEEEEECCCTT
T ss_pred -cCCceEEEEECCCCc
Confidence 023689999999865
No 95
>3d79_A PUA domain, putative uncharacterized protein PH0734; unknown function; 1.73A {Pyrococcus horikoshii}
Probab=98.71 E-value=1.9e-08 Score=91.83 Aligned_cols=72 Identities=29% Similarity=0.466 Sum_probs=66.2
Q ss_pred CEEEEccccHHHHHcCCccccCceeeccCCccCCCEEEEeeccccccCCCCchhhhhhhcccCCCCCCCcccCCCceEEE
Q 014571 124 KEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYIG 203 (422)
Q Consensus 124 k~ViVd~~~~eaVlrGA~v~~PGil~~~~~~~~gd~V~v~~~l~~~~~~p~W~~~~~r~~~~~~~~~~~~~~~~~~v~Vr 203 (422)
..|+||++|++++++||++++|||+.++.++++||.|.|.. +.++..++
T Consensus 95 ~~v~vd~gA~~~l~~GasL~~~GV~~~~g~f~~Gd~V~v~~-------------------------------~~~g~~ia 143 (179)
T 3d79_A 95 RRVVVDEGAVPHILNGADVMAPGIVDADEGIKEGDFVFVVE-------------------------------EKYGRPLA 143 (179)
T ss_dssp TEEEECGGGHHHHHTTCCEEGGGEEEECTTCCTTCEEEEEE-------------------------------TTTCCEEE
T ss_pred CEEEECccHHHHHhCCCCcCCCcEEEccCCccCCCEEEEEE-------------------------------CCCCeEEE
Confidence 79999999999999999999999999999999999999993 33578999
Q ss_pred EccCccCHHHHhcccCcceeecc
Q 014571 204 QGTAMMSRAGIFRASEGIAVDMH 226 (422)
Q Consensus 204 vg~a~msreel~~~~~GiaV~~~ 226 (422)
+|.+.++.+|+.+..+|.+++..
T Consensus 144 vG~~~~ss~e~~~~~kG~av~~~ 166 (179)
T 3d79_A 144 IGIALMSGKVMKEKNRGKAVKVI 166 (179)
T ss_dssp EEEESSCHHHHHHCSSSEEEEEE
T ss_pred EEEEEcCHHHHHhcCCceEEEEE
Confidence 99999999999988999998865
No 96
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.71 E-value=1.8e-08 Score=87.70 Aligned_cols=116 Identities=15% Similarity=0.069 Sum_probs=82.2
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccc
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNM 337 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~ 337 (422)
.++++.+|||+|||+|..+..+++.+++.++++++|+++ +++ ..++.+..+|.............
T Consensus 19 ~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~----------~~~~~~~~~d~~~~~~~~~~~~~---- 83 (180)
T 1ej0_A 19 LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP----------IVGVDFLQGDFRDELVMKALLER---- 83 (180)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC----------CTTEEEEESCTTSHHHHHHHHHH----
T ss_pred CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc----------cCcEEEEEcccccchhhhhhhcc----
Confidence 368899999999999999999999876668999999998 543 26789999998765310000000
Q ss_pred cCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEeh
Q 014571 338 CNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 338 ~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
...+.||.|++|.|+...+. +.... ......+.++++.+.. ++.+|.++++
T Consensus 84 ---~~~~~~D~i~~~~~~~~~~~-------------~~~~~---~~~~~~~~~~l~~~~~~L~~gG~l~~~ 135 (180)
T 1ej0_A 84 ---VGDSKVQVVMSDMAPNMSGT-------------PAVDI---PRAMYLVELALEMCRDVLAPGGSFVVK 135 (180)
T ss_dssp ---HTTCCEEEEEECCCCCCCSC-------------HHHHH---HHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CCCCceeEEEECCCccccCC-------------Cccch---HHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 01246999999999887766 11111 1234456788888765 8999999883
No 97
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.71 E-value=5.2e-08 Score=90.96 Aligned_cols=100 Identities=13% Similarity=0.123 Sum_probs=80.6
Q ss_pred ccceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEe
Q 014571 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318 (422)
Q Consensus 239 ~~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~ 318 (422)
..|....|..-...+...++++++.+|||++||+|..+..+++..+ ++|+++|+++.+++.++++++..|+.++.+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~ 146 (235)
T 1jg1_A 69 PAGQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVIL 146 (235)
T ss_dssp STTCEECCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCceeccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3566666655556667778899999999999999999999999864 78999999999999999999999998899999
Q ss_pred cchhhhhhccCCCCCCccccCCCCCCCCCceeecCCc
Q 014571 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 319 ~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPC 355 (422)
+|+..... ....||.|+++.+.
T Consensus 147 ~d~~~~~~---------------~~~~fD~Ii~~~~~ 168 (235)
T 1jg1_A 147 GDGSKGFP---------------PKAPYDVIIVTAGA 168 (235)
T ss_dssp SCGGGCCG---------------GGCCEEEEEECSBB
T ss_pred CCcccCCC---------------CCCCccEEEECCcH
Confidence 99732110 12348999987554
No 98
>1q7h_A Conserved hypothetical protein; structural genomics, MCSG, PSI, PR structure initiative; 2.10A {Thermoplasma acidophilum dsm 1728} SCOP: b.122.1.1 d.17.6.2
Probab=98.71 E-value=1.3e-08 Score=90.59 Aligned_cols=73 Identities=23% Similarity=0.484 Sum_probs=66.8
Q ss_pred CCCEEEEccccHHHHHcCCccccCceeeccCCccCCCEEEEeeccccccCCCCchhhhhhhcccCCCCCCCcccCCCceE
Q 014571 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (422)
Q Consensus 122 ~~k~ViVd~~~~eaVlrGA~v~~PGil~~~~~~~~gd~V~v~~~l~~~~~~p~W~~~~~r~~~~~~~~~~~~~~~~~~v~ 201 (422)
....|+||.+|.+++++||++++|||+.++.++++||.|.|+. .++..
T Consensus 69 ~~~~v~vd~ga~~~l~~Ga~ll~~GV~~~~~~~~~gd~V~V~~--------------------------------~~g~~ 116 (153)
T 1q7h_A 69 SRNIVTVDEGAEPHILNGSDLFAPGIVSMDDSIRKGDMIFVKS--------------------------------SKGYF 116 (153)
T ss_dssp SSSEEEECTTTHHHHTTTCCEEGGGEEEECTTCCTTCEEEEEE--------------------------------TTSCE
T ss_pred cCCEEEECHhHHHHHHcCCCcCccccCcccCceeCCCEEEEEE--------------------------------CCCCE
Confidence 5679999999999999999999999999999999999999993 36789
Q ss_pred EEEccCccCHHHHhcccCcceeecc
Q 014571 202 IGQGTAMMSRAGIFRASEGIAVDMH 226 (422)
Q Consensus 202 Vrvg~a~msreel~~~~~GiaV~~~ 226 (422)
+++|.+.+|.+|+.+..+|.+++..
T Consensus 117 ia~G~~~~ss~e~~~~~~G~~v~v~ 141 (153)
T 1q7h_A 117 IAVGMAEMDAGEVMATKRGKAARII 141 (153)
T ss_dssp EEEEEESSCHHHHHHHCCSEEEEEE
T ss_pred EEEEEEecCHHHHHhcCCCeEEEEE
Confidence 9999999999999888899888865
No 99
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.70 E-value=2.6e-08 Score=89.55 Aligned_cols=115 Identities=17% Similarity=0.052 Sum_probs=79.1
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCC--------cEEEEEcCChHHHHHHHHHHHHhCCcceEEE-ecchhhhhhccC
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDE--------GEVVAVDRSHNKVMDIQKLAAEMGLKCITTY-KLDALKAVRRKN 329 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~--------g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~-~~Da~~~~~~~~ 329 (422)
+++|.+|||+|||+|..+..+++.++.. ++|+++|+++.+ ...+++++ .+|.........
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHH
Confidence 6789999999999999999999987653 899999999842 34678888 888765421100
Q ss_pred CCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEeh
Q 014571 330 ESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 330 ~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
.... ...+.||.|++|.++...|. |..... ....++..+++.+.. |+.+|.++++
T Consensus 89 ~~~~-------~~~~~fD~V~~~~~~~~~~~-------------~~~~~~---~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (196)
T 2nyu_A 89 ILEV-------LPGRRADVILSDMAPNATGF-------------RDLDHD---RLISLCLTLLSVTPDILQPGGTFLCK 144 (196)
T ss_dssp HHHH-------SGGGCEEEEEECCCCCCCSC-------------HHHHHH---HHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHh-------cCCCCCcEEEeCCCCCCCCC-------------cccCHH---HHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 0000 01246999999986665555 222111 233456678887765 8999999984
No 100
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.70 E-value=7.1e-08 Score=97.82 Aligned_cols=120 Identities=21% Similarity=0.231 Sum_probs=90.8
Q ss_pred ChhHHHHHHhc------CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecc
Q 014571 247 NLPSIVTAHAL------DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320 (422)
Q Consensus 247 d~~S~lv~~~L------~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~D 320 (422)
|..+.+....+ ...+|.+|||+|||+|..+..+++. ..+|+++|+++..++.+++|++..|+. ++++.+|
T Consensus 213 d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~-v~~~~~D 288 (381)
T 3dmg_A 213 DPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK-AQALHSD 288 (381)
T ss_dssp CHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC-CEEEECS
T ss_pred CHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC-eEEEEcc
Confidence 34455544444 2347899999999999999999987 369999999999999999999999876 8999999
Q ss_pred hhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ce
Q 014571 321 ALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LR 399 (422)
Q Consensus 321 a~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr 399 (422)
+..... ..+.||.|++++|....+. . ......++++.+.. |+
T Consensus 289 ~~~~~~---------------~~~~fD~Ii~npp~~~~~~---~-------------------~~~~~~~~l~~~~~~Lk 331 (381)
T 3dmg_A 289 VDEALT---------------EEARFDIIVTNPPFHVGGA---V-------------------ILDVAQAFVNVAAARLR 331 (381)
T ss_dssp TTTTSC---------------TTCCEEEEEECCCCCTTCS---S-------------------CCHHHHHHHHHHHHHEE
T ss_pred hhhccc---------------cCCCeEEEEECCchhhccc---c-------------------cHHHHHHHHHHHHHhcC
Confidence 876431 1256999999999864333 0 01234566776654 89
Q ss_pred eccEEEeh
Q 014571 400 IQKVLVLT 407 (422)
Q Consensus 400 ~~~~~~~t 407 (422)
.+|.+++.
T Consensus 332 pGG~l~iv 339 (381)
T 3dmg_A 332 PGGVFFLV 339 (381)
T ss_dssp EEEEEEEE
T ss_pred cCcEEEEE
Confidence 99999883
No 101
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.70 E-value=3.7e-08 Score=91.17 Aligned_cols=82 Identities=16% Similarity=0.192 Sum_probs=68.2
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~ 338 (422)
+.+|++|||++||+|..+..+++.+++.++|+++|.++.+++.+++++++. .+++++++|+.......
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~---------- 138 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYR---------- 138 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGT----------
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhh----------
Confidence 778999999999999999999998766789999999999999999998765 68999999987632100
Q ss_pred CCCCCCCCCceeecCC
Q 014571 339 NSKDNNYITSQTSDSM 354 (422)
Q Consensus 339 ~~~~~~~FD~VLvDaP 354 (422)
...+.||.|++|.|
T Consensus 139 --~~~~~~D~v~~~~~ 152 (227)
T 1g8a_A 139 --ALVPKVDVIFEDVA 152 (227)
T ss_dssp --TTCCCEEEEEECCC
T ss_pred --cccCCceEEEECCC
Confidence 01246999999877
No 102
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.69 E-value=4.6e-08 Score=86.94 Aligned_cols=83 Identities=16% Similarity=0.147 Sum_probs=68.3
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhhhhccCCCCCCccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVRRKNESNDEPNM 337 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~~~~~~~~~~~~~~ 337 (422)
..++.+|||+|||+|..+..+++. +..+|+++|+++.+++.++++++..|+ .+++++++|+........
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~-------- 111 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFY-------- 111 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHH--------
T ss_pred hcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHH--------
Confidence 458899999999999999998874 347999999999999999999999998 579999999987542110
Q ss_pred cCCCCCCCCCceeecCC
Q 014571 338 CNSKDNNYITSQTSDSM 354 (422)
Q Consensus 338 ~~~~~~~~FD~VLvDaP 354 (422)
...+.||.|++|+|
T Consensus 112 ---~~~~~fD~i~~~~~ 125 (187)
T 2fhp_A 112 ---EEKLQFDLVLLDPP 125 (187)
T ss_dssp ---HTTCCEEEEEECCC
T ss_pred ---hcCCCCCEEEECCC
Confidence 00246899999988
No 103
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.69 E-value=5e-08 Score=91.78 Aligned_cols=112 Identities=13% Similarity=0.042 Sum_probs=84.2
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~ 338 (422)
..+|.+|||++||+|.-+.++++.. ..+|+++|+|+.+++.++++.+..+. +++++.+|+.......
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~~-~~~~~~~~a~~~~~~~---------- 124 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTH-KVIPLKGLWEDVAPTL---------- 124 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCSS-EEEEEESCHHHHGGGS----------
T ss_pred ccCCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCCC-ceEEEeehHHhhcccc----------
Confidence 5689999999999999999998863 35899999999999999999887764 6888999988764322
Q ss_pred CCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEehh
Q 014571 339 NSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLTA 408 (422)
Q Consensus 339 ~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t~ 408 (422)
..+.||.|+.|+.-+.... + ....+..+++++.+ ||.||+++.-+
T Consensus 125 ---~~~~FD~i~~D~~~~~~~~-------------~---------~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 125 ---PDGHFDGILYDTYPLSEET-------------W---------HTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp ---CTTCEEEEEECCCCCBGGG-------------T---------TTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ---cccCCceEEEeeeecccch-------------h---------hhcchhhhhhhhhheeCCCCEEEEEe
Confidence 1356999999976544433 0 11123456666655 89999998743
No 104
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.69 E-value=1.2e-08 Score=98.21 Aligned_cols=94 Identities=15% Similarity=0.051 Sum_probs=73.6
Q ss_pred HHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCCh-------HHHHHHHHHHHHhCCcc-eEEEecch
Q 014571 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH-------NKVMDIQKLAAEMGLKC-ITTYKLDA 321 (422)
Q Consensus 250 S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~-------~rl~~l~~~l~r~g~~n-v~~~~~Da 321 (422)
..+...++.+.+|.+|||+|||+|.-|..+|.. .++|+++|+++ ..++.+++|++..|+.+ |+++++|+
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~ 148 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNA 148 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCH
T ss_pred hHHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCH
Confidence 345556667778899999999999999999986 36899999999 99999999999888866 99999999
Q ss_pred hhhhhccCCCCCCccccCCCCCCCCCceeecCCccc
Q 014571 322 LKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLH 357 (422)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg 357 (422)
..+...... ..+.||.|++|||-..
T Consensus 149 ~~~l~~~~~-----------~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 149 AEQMPALVK-----------TQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHHHH-----------HHCCCSEEEECCCC--
T ss_pred HHHHHhhhc-----------cCCCccEEEECCCCCC
Confidence 875421100 0145899999997643
No 105
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.68 E-value=5.4e-08 Score=91.26 Aligned_cols=83 Identities=20% Similarity=0.143 Sum_probs=68.9
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccc
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNM 337 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~ 337 (422)
.+.++.+|||+|||+|..+..++... +.++|+++|+++.+++.+++++++.|+++++++++|+..+....
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~--------- 136 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRK--------- 136 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCT---------
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccc---------
Confidence 44678999999999999999999853 45799999999999999999999999989999999998754210
Q ss_pred cCCCCCCCCCceeecC
Q 014571 338 CNSKDNNYITSQTSDS 353 (422)
Q Consensus 338 ~~~~~~~~FD~VLvDa 353 (422)
...+.||.|++++
T Consensus 137 ---~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 137 ---DVRESYDIVTARA 149 (240)
T ss_dssp ---TTTTCEEEEEEEC
T ss_pred ---cccCCccEEEEec
Confidence 0135699999855
No 106
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.67 E-value=3.4e-09 Score=104.40 Aligned_cols=104 Identities=13% Similarity=0.051 Sum_probs=72.5
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcC----ChHHHHHHHHHHHHhCCcceEEEec-chhhhhhccCCCCC
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDR----SHNKVMDIQKLAAEMGLKCITTYKL-DALKAVRRKNESND 333 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~----s~~rl~~l~~~l~r~g~~nv~~~~~-Da~~~~~~~~~~~~ 333 (422)
+++|.+|||+|||||+.|..+++. ++|+|+|+ ++.++..+ ..++.|.++|.++++ |.+.++
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l~-------- 145 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFIP-------- 145 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTSC--------
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccCC--------
Confidence 578999999999999999999987 58999999 55544211 122344467899888 876532
Q ss_pred CccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEe
Q 014571 334 EPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVL 406 (422)
Q Consensus 334 ~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~ 406 (422)
...||.|++|.+|+ .|. |.... ..+...|..+.. |+.+|.+++
T Consensus 146 ---------~~~fD~V~sd~~~~-~g~-------------~~~d~-------~~~l~~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 146 ---------PERCDTLLCDIGES-SPN-------------PTVEA-------GRTLRVLNLVENWLSNNTQFCV 189 (305)
T ss_dssp ---------CCCCSEEEECCCCC-CSS-------------HHHHH-------HHHHHHHHHHHHHCCTTCEEEE
T ss_pred ---------cCCCCEEEECCccc-cCc-------------chhhH-------HHHHHHHHHHHHHhCCCCEEEE
Confidence 23689999999997 666 21111 112246666644 899998887
No 107
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.67 E-value=5.4e-08 Score=90.61 Aligned_cols=85 Identities=21% Similarity=0.241 Sum_probs=69.5
Q ss_pred hcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCc
Q 014571 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEP 335 (422)
Q Consensus 256 ~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~ 335 (422)
.+.+++|++|||++||+|..+.++++..++.++|+++|+++.+++.+.+++++. .++.++.+|+.......
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~~~------- 142 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHKYR------- 142 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGGGG-------
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhhhc-------
Confidence 345788999999999999999999998766689999999999999998888875 68999999987642100
Q ss_pred cccCCCCCCCCCceeecCC
Q 014571 336 NMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 336 ~~~~~~~~~~FD~VLvDaP 354 (422)
...+.||.|++|+|
T Consensus 143 -----~~~~~~D~V~~~~~ 156 (233)
T 2ipx_A 143 -----MLIAMVDVIFADVA 156 (233)
T ss_dssp -----GGCCCEEEEEECCC
T ss_pred -----ccCCcEEEEEEcCC
Confidence 01346999999887
No 108
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.67 E-value=1.4e-07 Score=89.29 Aligned_cols=110 Identities=17% Similarity=0.071 Sum_probs=83.2
Q ss_pred HHhcC-CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhhhhhccCCC
Q 014571 254 AHALD-PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKAVRRKNES 331 (422)
Q Consensus 254 ~~~L~-p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~~~~~~~~~ 331 (422)
...+. +++|.+|||+|||+|..+..+++. +.++|+++|+++.+++.++++++..|+. +++++++|....+.
T Consensus 38 l~~l~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----- 110 (267)
T 3kkz_A 38 LSFIDNLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPF----- 110 (267)
T ss_dssp HTTCCCCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC-----
T ss_pred HHhcccCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCC-----
Confidence 34444 678999999999999999999987 4579999999999999999999999985 59999999876431
Q ss_pred CCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEehh
Q 014571 332 NDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLTA 408 (422)
Q Consensus 332 ~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t~ 408 (422)
..+.||.|++.. .+.++ + ..++|+.+.. |+.+|.++++.
T Consensus 111 ----------~~~~fD~i~~~~------~~~~~----~------------------~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 111 ----------RNEELDLIWSEG------AIYNI----G------------------FERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp ----------CTTCEEEEEESS------CGGGT----C------------------HHHHHHHHGGGEEEEEEEEEEE
T ss_pred ----------CCCCEEEEEEcC------Cceec----C------------------HHHHHHHHHHHcCCCCEEEEEE
Confidence 135699998632 21111 0 1235666654 89999999854
No 109
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.67 E-value=6.7e-08 Score=91.13 Aligned_cols=95 Identities=16% Similarity=0.145 Sum_probs=74.2
Q ss_pred ccceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEe
Q 014571 239 LEGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYK 318 (422)
Q Consensus 239 ~~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~ 318 (422)
.....+.|..........+.+.++.+|||++||+|..+..+++.. ++|+++|+|+.+++.++++++..|+.++.+++
T Consensus 15 ~~s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~ 91 (260)
T 1vl5_A 15 VTSQIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQ 91 (260)
T ss_dssp --------CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred ecCccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEE
Confidence 455556667677777888889999999999999999999999874 49999999999999999999999998999999
Q ss_pred cchhhhhhccCCCCCCccccCCCCCCCCCceee
Q 014571 319 LDALKAVRRKNESNDEPNMCNSKDNNYITSQTS 351 (422)
Q Consensus 319 ~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLv 351 (422)
+|+...+. ..+.||.|++
T Consensus 92 ~d~~~l~~---------------~~~~fD~V~~ 109 (260)
T 1vl5_A 92 GDAEQMPF---------------TDERFHIVTC 109 (260)
T ss_dssp CCC-CCCS---------------CTTCEEEEEE
T ss_pred ecHHhCCC---------------CCCCEEEEEE
Confidence 99876431 1356899886
No 110
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.67 E-value=6.4e-08 Score=88.46 Aligned_cols=87 Identities=17% Similarity=0.195 Sum_probs=74.0
Q ss_pred HHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCC
Q 014571 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNE 330 (422)
Q Consensus 251 ~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~ 330 (422)
......+.+.++.+|||+|||+|..+..+++..++.++|+++|+++.+++.++++++..|+.++.++.+|+...+.
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~---- 102 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPL---- 102 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSS----
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCC----
Confidence 3455666888999999999999999999999876678999999999999999999999999899999999875431
Q ss_pred CCCCccccCCCCCCCCCceeec
Q 014571 331 SNDEPNMCNSKDNNYITSQTSD 352 (422)
Q Consensus 331 ~~~~~~~~~~~~~~~FD~VLvD 352 (422)
..+.||.|++.
T Consensus 103 -----------~~~~fD~v~~~ 113 (219)
T 3dh0_A 103 -----------PDNTVDFIFMA 113 (219)
T ss_dssp -----------CSSCEEEEEEE
T ss_pred -----------CCCCeeEEEee
Confidence 13568999873
No 111
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.65 E-value=5.1e-08 Score=95.29 Aligned_cols=110 Identities=13% Similarity=0.053 Sum_probs=78.3
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh--C--CcceEEEecchhhhhhccCCCCCCcc
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--G--LKCITTYKLDALKAVRRKNESNDEPN 336 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~--g--~~nv~~~~~Da~~~~~~~~~~~~~~~ 336 (422)
.+.+|||+|||+|+.+..+++.. +.++|+++|+++..++.+++++..+ + .++++++.+|+......
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~--------- 159 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRK--------- 159 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG---------
T ss_pred CCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh---------
Confidence 45899999999999999999874 3579999999999999999998662 2 36799999999875421
Q ss_pred ccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEeh
Q 014571 337 MCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 337 ~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
..+.||.|++|+|+.+.+. +. .. .+.++++++.. |+.+|++++.
T Consensus 160 -----~~~~fD~Ii~d~~~~~~~~-------~~--------~l-------~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 160 -----FKNEFDVIIIDSTDPTAGQ-------GG--------HL-------FTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp -----CSSCEEEEEEEC-------------------------C-------CSHHHHHHHHHHEEEEEEEEEE
T ss_pred -----CCCCceEEEEcCCCcccCc-------hh--------hh-------hHHHHHHHHHHhcCCCcEEEEE
Confidence 1356999999998752222 00 00 23456666644 7888888883
No 112
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.65 E-value=1.1e-07 Score=88.60 Aligned_cols=112 Identities=12% Similarity=0.046 Sum_probs=81.5
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~ 338 (422)
++++.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.+++++++.+ .++.++++|+.......
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~---------- 124 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPTL---------- 124 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGGS----------
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhhccc----------
Confidence 6789999999999999999997752 3489999999999999999988877 67999999998763211
Q ss_pred CCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEehh
Q 014571 339 NSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLTA 408 (422)
Q Consensus 339 ~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t~ 408 (422)
..+.||.|++|.-.- . . ..+. ......+++++.. ||.+|++++..
T Consensus 125 ---~~~~fD~V~~d~~~~---~---~-------~~~~---------~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 125 ---PDGHFDGILYDTYPL---S---E-------ETWH---------THQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp ---CTTCEEEEEECCCCC---B---G-------GGTT---------THHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ---CCCceEEEEECCccc---c---h-------hhhh---------hhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 135699999971111 1 0 0011 1122456776655 89999999744
No 113
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.65 E-value=4.4e-08 Score=100.92 Aligned_cols=141 Identities=12% Similarity=0.072 Sum_probs=99.1
Q ss_pred cceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccC------------CCcEEEEEcCChHHHHHHHHHHH
Q 014571 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLR------------DEGEVVAVDRSHNKVMDIQKLAA 307 (422)
Q Consensus 240 ~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~------------~~g~V~A~D~s~~rl~~l~~~l~ 307 (422)
.|.+|--..-+.+.+..+.|+++.+|||.|||+|+....+++.+. ....++|+|+++..++.++.|+.
T Consensus 150 ~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 150 AGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp CGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 455554334456777888999999999999999999999988652 13579999999999999999999
Q ss_pred HhCCc--ceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhH
Q 014571 308 EMGLK--CITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECG 385 (422)
Q Consensus 308 r~g~~--nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~ 385 (422)
..|+. ++.+.++|+...+. ...||.|+.+||.++... ..+. -....+.....
T Consensus 230 l~g~~~~~~~i~~gD~l~~~~----------------~~~fD~Iv~NPPf~~~~~---~~~~-~~~~~~~~~~~------ 283 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKEP----------------STLVDVILANPPFGTRPA---GSVD-INRPDFYVETK------ 283 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSCC----------------SSCEEEEEECCCSSCCCT---TCCC-CCCTTSSSCCS------
T ss_pred HhCCCcCCCCEeeCCCCCCcc----------------cCCcCEEEECCCCCCccc---ccch-hhHhhcCCCCc------
Confidence 88885 67888888765321 236999999999998765 2111 01111111111
Q ss_pred HHHHHHHHHhcc-ceeccEEEe
Q 014571 386 MAQEEINALVVG-LRIQKVLVL 406 (422)
Q Consensus 386 ~~Q~~IL~~a~~-lr~~~~~~~ 406 (422)
..|...+.++.. |+.+|.+++
T Consensus 284 ~~~~~fl~~~~~~Lk~gG~~a~ 305 (445)
T 2okc_A 284 NNQLNFLQHMMLMLKTGGRAAV 305 (445)
T ss_dssp CHHHHHHHHHHHHEEEEEEEEE
T ss_pred chHHHHHHHHHHHhccCCEEEE
Confidence 135666776654 788876654
No 114
>3zv0_C H/ACA ribonucleoprotein complex subunit 4; cell cycle, RNP assembly, X-linked dyskeratosis congenita; 2.80A {Saccharomyces cerevisiae}
Probab=98.64 E-value=3.3e-08 Score=90.97 Aligned_cols=74 Identities=22% Similarity=0.351 Sum_probs=67.7
Q ss_pred CCCEEEEccccHHHHHcCCccccCceeeccCCccCCCEEEEeeccccccCCCCchhhhhhhcccCCCCCCCcccCCCceE
Q 014571 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (422)
Q Consensus 122 ~~k~ViVd~~~~eaVlrGA~v~~PGil~~~~~~~~gd~V~v~~~l~~~~~~p~W~~~~~r~~~~~~~~~~~~~~~~~~v~ 201 (422)
..+.|+||.+|++|+++||++++|||+..+.+|+.||.|.|+ ...+..
T Consensus 74 ~~g~VvVD~GAv~Al~~GaSLl~pGV~~v~g~F~~GD~V~V~--------------------------------~~~G~~ 121 (195)
T 3zv0_C 74 GYKRIVVKDSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLI--------------------------------TTKGEA 121 (195)
T ss_dssp TSEEEEECHHHHHHHHTTCCEEGGGEEEEETTCCTTCEEEEE--------------------------------CTTCCE
T ss_pred cCCeEEECHHHHHHHhcCCCccCCCcEecCCCcCCCCEEEEE--------------------------------cCCCCE
Confidence 568899999999999999999999999999999999999999 234668
Q ss_pred EEEccCccCHHHHhcccCcceeeccc
Q 014571 202 IGQGTAMMSRAGIFRASEGIAVDMHN 227 (422)
Q Consensus 202 Vrvg~a~msreel~~~~~GiaV~~~~ 227 (422)
|++|.+.++.+++....+|++++...
T Consensus 122 IAvG~a~~sS~Ei~~~~kG~aVkv~r 147 (195)
T 3zv0_C 122 IAVAIAQMSTVDLASCDHGVVASVKR 147 (195)
T ss_dssp EEEEEESSCHHHHHHCSSSEEEEEEE
T ss_pred EEEEEEcCCHHHHhhcCCcEEEEEEE
Confidence 99999999999999999999998663
No 115
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.64 E-value=1.3e-07 Score=88.04 Aligned_cols=87 Identities=20% Similarity=0.237 Sum_probs=73.5
Q ss_pred HHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhhhhcc
Q 014571 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVRRK 328 (422)
Q Consensus 250 S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~~~~~ 328 (422)
...+...+++.+|.+|||++||+|..+..+++. .++|+++|+++.+++.++++++..|+ .++.+...|......
T Consensus 80 ~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-- 154 (248)
T 2yvl_A 80 SFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV-- 154 (248)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC--
T ss_pred HHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc--
Confidence 346667788899999999999999999999988 47999999999999999999999998 679999998765320
Q ss_pred CCCCCCccccCCCCCCCCCceeecCC
Q 014571 329 NESNDEPNMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 329 ~~~~~~~~~~~~~~~~~FD~VLvDaP 354 (422)
..+.||.|++|+|
T Consensus 155 -------------~~~~~D~v~~~~~ 167 (248)
T 2yvl_A 155 -------------PEGIFHAAFVDVR 167 (248)
T ss_dssp -------------CTTCBSEEEECSS
T ss_pred -------------CCCcccEEEECCc
Confidence 1245899999876
No 116
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.63 E-value=1e-07 Score=92.51 Aligned_cols=95 Identities=13% Similarity=0.081 Sum_probs=79.1
Q ss_pred eChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhh
Q 014571 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKA 324 (422)
Q Consensus 246 Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~ 324 (422)
+..-...++..+++.++++|||+|||+|..|..+++. .++|+|+|+++.+++.++++++..|. .+++++++|+.+.
T Consensus 13 d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 13 NPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp CHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc
Confidence 4444556677788899999999999999999999987 35899999999999999999988776 6899999998764
Q ss_pred hhccCCCCCCccccCCCCCCCCCceeecCCccccCc
Q 014571 325 VRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEV 360 (422)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~ 360 (422)
.. ..||.|+++.|+..+..
T Consensus 90 ~~-----------------~~fD~vv~nlpy~~~~~ 108 (285)
T 1zq9_A 90 DL-----------------PFFDTCVANLPYQISSP 108 (285)
T ss_dssp CC-----------------CCCSEEEEECCGGGHHH
T ss_pred cc-----------------hhhcEEEEecCcccchH
Confidence 21 24899999999987643
No 117
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.63 E-value=7.2e-08 Score=95.79 Aligned_cols=80 Identities=15% Similarity=0.072 Sum_probs=70.2
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhhhhccCCCCCCcccc
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVRRKNESNDEPNMC 338 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~~~~~~~~~~~~~~~ 338 (422)
.+|++|||+|||+|+.+.+ |. +..+|+|+|+++..++.+++|++..|+ .+++++++|+..+.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~------------- 256 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD------------- 256 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC-------------
T ss_pred CCCCEEEEccCccCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc-------------
Confidence 5899999999999999999 76 257999999999999999999999998 57999999987642
Q ss_pred CCCCCCCCCceeecCCccccCch
Q 014571 339 NSKDNNYITSQTSDSMKLHKEVP 361 (422)
Q Consensus 339 ~~~~~~~FD~VLvDaPCSg~G~l 361 (422)
..||.|++|+|..+...+
T Consensus 257 -----~~fD~Vi~dpP~~~~~~l 274 (336)
T 2yx1_A 257 -----VKGNRVIMNLPKFAHKFI 274 (336)
T ss_dssp -----CCEEEEEECCTTTGGGGH
T ss_pred -----CCCcEEEECCcHhHHHHH
Confidence 348999999998876554
No 118
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.62 E-value=1.2e-07 Score=87.67 Aligned_cols=96 Identities=19% Similarity=0.126 Sum_probs=76.9
Q ss_pred cceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEec
Q 014571 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKL 319 (422)
Q Consensus 240 ~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~ 319 (422)
.|....+..-...+...+.+.++.+|||+|||+|..+..+++.. ++|+++|+++.+++.+++++...| ++.++.+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~ 123 (231)
T 1vbf_A 49 PGINTTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN--NIKLILG 123 (231)
T ss_dssp TTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS--SEEEEES
T ss_pred CCCccCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC--CeEEEEC
Confidence 45555554445566677788999999999999999999999874 799999999999999999998877 8999999
Q ss_pred chhhhhhccCCCCCCccccCCCCCCCCCceeecCCc
Q 014571 320 DALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 320 Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPC 355 (422)
|+..... ..+.||.|+++.++
T Consensus 124 d~~~~~~---------------~~~~fD~v~~~~~~ 144 (231)
T 1vbf_A 124 DGTLGYE---------------EEKPYDRVVVWATA 144 (231)
T ss_dssp CGGGCCG---------------GGCCEEEEEESSBB
T ss_pred Ccccccc---------------cCCCccEEEECCcH
Confidence 9875211 12468999987654
No 119
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.62 E-value=6.3e-08 Score=90.70 Aligned_cols=99 Identities=16% Similarity=0.128 Sum_probs=76.8
Q ss_pred ChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhhhh
Q 014571 247 NLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKAV 325 (422)
Q Consensus 247 d~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~~~ 325 (422)
.....+...++...++.+|||+|||+|..|..+++.+++.++|+++|+++.+++.+++++++.|+. +|+++.+|+....
T Consensus 58 ~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l 137 (232)
T 3cbg_A 58 PEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATL 137 (232)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence 334445555555567889999999999999999998876789999999999999999999999985 5999999987643
Q ss_pred hccCCCCCCccccCCCCCCCCCceeecCC
Q 014571 326 RRKNESNDEPNMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~FD~VLvDaP 354 (422)
...... ...+.||.|++|++
T Consensus 138 ~~l~~~---------~~~~~fD~V~~d~~ 157 (232)
T 3cbg_A 138 EQLTQG---------KPLPEFDLIFIDAD 157 (232)
T ss_dssp HHHHTS---------SSCCCEEEEEECSC
T ss_pred HHHHhc---------CCCCCcCEEEECCC
Confidence 221100 00156999999976
No 120
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.61 E-value=2.8e-07 Score=91.44 Aligned_cols=120 Identities=16% Similarity=0.106 Sum_probs=92.4
Q ss_pred ChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhh
Q 014571 247 NLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326 (422)
Q Consensus 247 d~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~ 326 (422)
|..+.+....+.+.++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.++++++..++. ++++..|.....
T Consensus 182 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~~~~~d~~~~~- 258 (343)
T 2pjd_A 182 DVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGVE-GEVFASNVFSEV- 258 (343)
T ss_dssp CHHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTC-
T ss_pred cHHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCC-CEEEEccccccc-
Confidence 5667888888888888999999999999999999874 4569999999999999999999998875 567777765321
Q ss_pred ccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEE
Q 014571 327 RKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLV 405 (422)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~ 405 (422)
.+.||.|++++|... |. ........++++.+.. |+.+|.++
T Consensus 259 ----------------~~~fD~Iv~~~~~~~-g~---------------------~~~~~~~~~~l~~~~~~LkpgG~l~ 300 (343)
T 2pjd_A 259 ----------------KGRFDMIISNPPFHD-GM---------------------QTSLDAAQTLIRGAVRHLNSGGELR 300 (343)
T ss_dssp ----------------CSCEEEEEECCCCCS-SS---------------------HHHHHHHHHHHHHHGGGEEEEEEEE
T ss_pred ----------------cCCeeEEEECCCccc-Cc---------------------cCCHHHHHHHHHHHHHhCCCCcEEE
Confidence 246999999887542 11 0011234567777755 89999998
Q ss_pred eh
Q 014571 406 LT 407 (422)
Q Consensus 406 ~t 407 (422)
++
T Consensus 301 i~ 302 (343)
T 2pjd_A 301 IV 302 (343)
T ss_dssp EE
T ss_pred EE
Confidence 84
No 121
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.60 E-value=2e-07 Score=82.49 Aligned_cols=91 Identities=20% Similarity=0.199 Sum_probs=74.4
Q ss_pred eChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhh
Q 014571 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKA 324 (422)
Q Consensus 246 Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~ 324 (422)
++.-...+...+.+.++.+|||+|||+|..+..+++.. .+|+++|.++.+++.++++++..|+ .++.+..+|....
T Consensus 18 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 94 (192)
T 1l3i_A 18 AMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA 94 (192)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh
Confidence 34444556666788999999999999999999999874 7999999999999999999999998 7899999998763
Q ss_pred hhccCCCCCCccccCCCCCCCCCceeecCC
Q 014571 325 VRRKNESNDEPNMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~FD~VLvDaP 354 (422)
... ...||.|+++.+
T Consensus 95 ~~~---------------~~~~D~v~~~~~ 109 (192)
T 1l3i_A 95 LCK---------------IPDIDIAVVGGS 109 (192)
T ss_dssp HTT---------------SCCEEEEEESCC
T ss_pred ccc---------------CCCCCEEEECCc
Confidence 210 135899998654
No 122
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.58 E-value=8.5e-08 Score=92.39 Aligned_cols=92 Identities=17% Similarity=0.096 Sum_probs=74.2
Q ss_pred hHHHHHHhcCCCCC--CeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhC--------C-cceEEE
Q 014571 249 PSIVTAHALDPQKG--ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG--------L-KCITTY 317 (422)
Q Consensus 249 ~S~lv~~~L~p~pg--~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g--------~-~nv~~~ 317 (422)
....+..++.+++| .+|||++||.|.-++.+|+. .++|+++|+++..++.+++++++.+ + .+++++
T Consensus 74 ~~e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~ 150 (258)
T 2oyr_A 74 RGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLI 150 (258)
T ss_dssp GGSHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEE
T ss_pred hHHHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEE
Confidence 34556677888888 99999999999999999997 3589999999999888888887653 4 579999
Q ss_pred ecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccc
Q 014571 318 KLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLH 357 (422)
Q Consensus 318 ~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg 357 (422)
++|+..+.... ...||.|++|||-..
T Consensus 151 ~~D~~~~L~~~--------------~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 151 HASSLTALTDI--------------TPRPQVVYLDPMFPH 176 (258)
T ss_dssp ESCHHHHSTTC--------------SSCCSEEEECCCCCC
T ss_pred ECCHHHHHHhC--------------cccCCEEEEcCCCCC
Confidence 99998764211 235999999998754
No 123
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.58 E-value=1e-07 Score=92.85 Aligned_cols=84 Identities=14% Similarity=0.123 Sum_probs=70.4
Q ss_pred HHHHHhcC-CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhhhhhcc
Q 014571 251 IVTAHALD-PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKAVRRK 328 (422)
Q Consensus 251 ~lv~~~L~-p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~~~~~~ 328 (422)
..+...+. +++|.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++++.|+. ++.++++|+...+.
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-- 181 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPF-- 181 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC--
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCC--
Confidence 34556666 7899999999999999999999875 368999999999999999999999986 79999999875431
Q ss_pred CCCCCCccccCCCCCCCCCceee
Q 014571 329 NESNDEPNMCNSKDNNYITSQTS 351 (422)
Q Consensus 329 ~~~~~~~~~~~~~~~~~FD~VLv 351 (422)
..+.||.|++
T Consensus 182 -------------~~~~fD~V~~ 191 (312)
T 3vc1_A 182 -------------DKGAVTASWN 191 (312)
T ss_dssp -------------CTTCEEEEEE
T ss_pred -------------CCCCEeEEEE
Confidence 1356898886
No 124
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.57 E-value=8.8e-08 Score=89.65 Aligned_cols=79 Identities=20% Similarity=0.167 Sum_probs=67.6
Q ss_pred eChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEEEecchhhh
Q 014571 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKA 324 (422)
Q Consensus 246 Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~~ 324 (422)
+.....+...++...++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.+++++++.|+.+ +.++.+|+...
T Consensus 45 ~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 124 (239)
T 2hnk_A 45 SPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALET 124 (239)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHH
Confidence 33444555566667789999999999999999999988656899999999999999999999999866 99999998764
No 125
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.57 E-value=9.6e-08 Score=88.99 Aligned_cols=85 Identities=18% Similarity=0.176 Sum_probs=67.8
Q ss_pred cCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcc
Q 014571 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPN 336 (422)
Q Consensus 257 L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~ 336 (422)
+.++++.+|||++||+|..+.++++..+ .++|+++|+++.+++.++++++.. +|+.++.+|+.......
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~-------- 138 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEYA-------- 138 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGGT--------
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCccccc--------
Confidence 4567899999999999999999999875 689999999999999999987765 78999999987632100
Q ss_pred ccCCCCCCCCCceeecCCcc
Q 014571 337 MCNSKDNNYITSQTSDSMKL 356 (422)
Q Consensus 337 ~~~~~~~~~FD~VLvDaPCS 356 (422)
...+.||.|+.|.|..
T Consensus 139 ----~~~~~~D~v~~~~~~~ 154 (230)
T 1fbn_A 139 ----NIVEKVDVIYEDVAQP 154 (230)
T ss_dssp ----TTSCCEEEEEECCCST
T ss_pred ----ccCccEEEEEEecCCh
Confidence 0124689999776543
No 126
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.57 E-value=1.2e-07 Score=92.13 Aligned_cols=111 Identities=17% Similarity=0.089 Sum_probs=84.6
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEEEecchhhhhhccCCCCCCcc
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKAVRRKNESNDEPN 336 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~~~~~~~~~~~~~~ 336 (422)
.++++.+|||+|||+|..+..+|....+.++|+++|+++.+++.++++++..|+.+ ++++++|+...+.
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------- 184 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT---------- 184 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC----------
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc----------
Confidence 46789999999999999999987444567899999999999999999999999865 9999999886431
Q ss_pred ccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEehh
Q 014571 337 MCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLTA 408 (422)
Q Consensus 337 ~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t~ 408 (422)
.+.||.|++..+- . +.+.. ..+.++|+.+.. |+.+|.++++.
T Consensus 185 ------~~~fD~v~~~~~~----~-------------~~~~~-------~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 185 ------REGYDLLTSNGLN----I-------------YEPDD-------ARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp ------CSCEEEEECCSSG----G-------------GCCCH-------HHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ------cCCeEEEEECChh----h-------------hcCCH-------HHHHHHHHHHHHhcCCCeEEEEEe
Confidence 2568999963211 1 11111 234567777765 89999999855
No 127
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.57 E-value=1.1e-07 Score=100.50 Aligned_cols=107 Identities=10% Similarity=-0.007 Sum_probs=83.9
Q ss_pred cceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCC-----------------cEEEEEcCChHHHHHH
Q 014571 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDE-----------------GEVVAVDRSHNKVMDI 302 (422)
Q Consensus 240 ~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~-----------------g~V~A~D~s~~rl~~l 302 (422)
.|.+|--..-+.+.+.+++|++|.+|+|.|||+|+....++..+... ..++|+|+++..++.+
T Consensus 148 ~G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 148 AGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp --CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred CCeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 45555444455667788899999999999999999999998765322 3799999999999999
Q ss_pred HHHHHHhCCcc-----eEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCc
Q 014571 303 QKLAAEMGLKC-----ITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEV 360 (422)
Q Consensus 303 ~~~l~r~g~~n-----v~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~ 360 (422)
+.|+...|+.+ +.+.++|+...+.. ....||.|+.+||.++...
T Consensus 228 ~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~--------------~~~~fD~Vv~NPPf~~~~~ 276 (541)
T 2ar0_A 228 LMNCLLHDIEGNLDHGGAIRLGNTLGSDGE--------------NLPKAHIVATNPPFGSAAG 276 (541)
T ss_dssp HHHHHTTTCCCBGGGTBSEEESCTTSHHHH--------------TSCCEEEEEECCCCTTCSS
T ss_pred HHHHHHhCCCccccccCCeEeCCCcccccc--------------cccCCeEEEECCCcccccc
Confidence 99999888875 78888987654311 1246999999999998765
No 128
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.56 E-value=1.9e-07 Score=94.74 Aligned_cols=86 Identities=12% Similarity=0.001 Sum_probs=72.2
Q ss_pred HHhcCCCCCCeEEEecCCCChhHHHHHhccCC-------------------------------------CcEEEEEcCCh
Q 014571 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRD-------------------------------------EGEVVAVDRSH 296 (422)
Q Consensus 254 ~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~-------------------------------------~g~V~A~D~s~ 296 (422)
......+++.+|||.|||+|+.+..+|....+ ...|+++|+++
T Consensus 188 l~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~ 267 (385)
T 3ldu_A 188 IYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDE 267 (385)
T ss_dssp HHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCH
T ss_pred HHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCH
Confidence 34667789999999999999999988876432 25799999999
Q ss_pred HHHHHHHHHHHHhCCc-ceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCc
Q 014571 297 NKVMDIQKLAAEMGLK-CITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 297 ~rl~~l~~~l~r~g~~-nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPC 355 (422)
..++.+++|++..|+. +|++.++|+..... ...||.|++|||-
T Consensus 268 ~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~----------------~~~~D~Iv~NPPy 311 (385)
T 3ldu_A 268 ESIDIARENAEIAGVDEYIEFNVGDATQFKS----------------EDEFGFIITNPPY 311 (385)
T ss_dssp HHHHHHHHHHHHHTCGGGEEEEECCGGGCCC----------------SCBSCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEEECChhhcCc----------------CCCCcEEEECCCC
Confidence 9999999999999986 69999999886531 2358999999995
No 129
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.54 E-value=2.1e-07 Score=87.79 Aligned_cols=116 Identities=12% Similarity=0.055 Sum_probs=79.6
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHH------hCCcceEEEecchhh-hhhccCCC
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAE------MGLKCITTYKLDALK-AVRRKNES 331 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r------~g~~nv~~~~~Da~~-~~~~~~~~ 331 (422)
..++.+|||+|||.|..+..+|+.. +...|+|+|+++.+++.++++++. .+..||.++++|+.. ++...
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~--- 119 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFF--- 119 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHC---
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhC---
Confidence 4567899999999999999999875 457999999999999999998875 467899999999986 32111
Q ss_pred CCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEeh
Q 014571 332 NDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 332 ~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
..+.||.|++..|. . |....-.-++ -.|..+|+.+.. |+.+|.++++
T Consensus 120 ----------~~~~~D~v~~~~~d--------------p---~~k~~h~krr--~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 120 ----------YKGQLTKMFFLFPD--------------P---HFKRTKHKWR--IISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp ----------CTTCEEEEEEESCC------------------------------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred ----------CCcCeeEEEEeCCC--------------c---hhhhhhhhhh--hhhHHHHHHHHHHCCCCCEEEEE
Confidence 13458988874332 1 1110000000 024567777755 8999999884
No 130
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.54 E-value=1.3e-07 Score=85.77 Aligned_cols=73 Identities=11% Similarity=0.051 Sum_probs=62.3
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccc
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNM 337 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~ 337 (422)
.+.++.+|||+|||+|..+..+++. +..+|+++|+++.+++.++++++ +++++++|+..++
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~------------ 108 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS------------ 108 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC------------
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC------------
Confidence 4668899999999999999999986 34689999999999999999875 6889999987531
Q ss_pred cCCCCCCCCCceeecCCc
Q 014571 338 CNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 338 ~~~~~~~~FD~VLvDaPC 355 (422)
+.||.|++|+|-
T Consensus 109 ------~~~D~v~~~~p~ 120 (200)
T 1ne2_A 109 ------GKYDTWIMNPPF 120 (200)
T ss_dssp ------CCEEEEEECCCC
T ss_pred ------CCeeEEEECCCc
Confidence 358999999885
No 131
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.53 E-value=2.8e-07 Score=85.12 Aligned_cols=113 Identities=14% Similarity=0.036 Sum_probs=83.0
Q ss_pred HHHHhcC-CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCC
Q 014571 252 VTAHALD-PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNE 330 (422)
Q Consensus 252 lv~~~L~-p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~ 330 (422)
.+...+. +.++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.+++++...+ ++.++++|+...+.
T Consensus 34 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~---- 106 (234)
T 3dtn_A 34 VSVSIASVDTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDF---- 106 (234)
T ss_dssp HHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCC----
T ss_pred HHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCC----
Confidence 3444444 6788999999999999999999986 45799999999999999999877665 89999999876431
Q ss_pred CCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEehh
Q 014571 331 SNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLTA 408 (422)
Q Consensus 331 ~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t~ 408 (422)
.+.||.|++.. .+. +.+. ....++|+++.. |+.+|.++++.
T Consensus 107 ------------~~~fD~v~~~~------~l~-----------~~~~--------~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 107 ------------EEKYDMVVSAL------SIH-----------HLED--------EDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp ------------CSCEEEEEEES------CGG-----------GSCH--------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------CCCceEEEEeC------ccc-----------cCCH--------HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 25689999732 210 1110 022456777755 89999999844
No 132
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.52 E-value=3.7e-07 Score=81.69 Aligned_cols=85 Identities=15% Similarity=0.124 Sum_probs=71.2
Q ss_pred hHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhcc
Q 014571 249 PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRK 328 (422)
Q Consensus 249 ~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~ 328 (422)
.+..+...+...++.+|||++||+|..+..+++. ..+|+++|+++.+++.++++++..+++++.+..+|....+.
T Consensus 20 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-- 94 (199)
T 2xvm_A 20 THSEVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-- 94 (199)
T ss_dssp CCHHHHHHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC--
T ss_pred ccHHHHHHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC--
Confidence 3445666777788899999999999999999987 46999999999999999999999998889999999876421
Q ss_pred CCCCCCccccCCCCCCCCCceeec
Q 014571 329 NESNDEPNMCNSKDNNYITSQTSD 352 (422)
Q Consensus 329 ~~~~~~~~~~~~~~~~~FD~VLvD 352 (422)
.+.||.|++.
T Consensus 95 --------------~~~~D~v~~~ 104 (199)
T 2xvm_A 95 --------------DRQYDFILST 104 (199)
T ss_dssp --------------CCCEEEEEEE
T ss_pred --------------CCCceEEEEc
Confidence 2458999863
No 133
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.52 E-value=3e-07 Score=90.19 Aligned_cols=88 Identities=15% Similarity=0.023 Sum_probs=73.3
Q ss_pred HHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccC
Q 014571 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKN 329 (422)
Q Consensus 250 S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~ 329 (422)
...++..++++++++|||++||+|..|..+++. .++|+|+|+++.+++.++++++ +..+++++++|+.+....
T Consensus 39 ~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~~~~~-- 111 (295)
T 3gru_A 39 VNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALKVDLN-- 111 (295)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTTSCGG--
T ss_pred HHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchhhCCcc--
Confidence 344566778999999999999999999999997 4699999999999999999987 456899999999875321
Q ss_pred CCCCCccccCCCCCCCCCceeecCCccc
Q 014571 330 ESNDEPNMCNSKDNNYITSQTSDSMKLH 357 (422)
Q Consensus 330 ~~~~~~~~~~~~~~~~FD~VLvDaPCSg 357 (422)
...||.|+.+.|-.-
T Consensus 112 -------------~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 112 -------------KLDFNKVVANLPYQI 126 (295)
T ss_dssp -------------GSCCSEEEEECCGGG
T ss_pred -------------cCCccEEEEeCcccc
Confidence 234899999988643
No 134
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.52 E-value=2.8e-07 Score=93.86 Aligned_cols=87 Identities=13% Similarity=0.028 Sum_probs=72.6
Q ss_pred HHHhcCCCCCCeEEEecCCCChhHHHHHhccCC-------------------------------------CcEEEEEcCC
Q 014571 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRD-------------------------------------EGEVVAVDRS 295 (422)
Q Consensus 253 v~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~-------------------------------------~g~V~A~D~s 295 (422)
.......+++..|||.+||+|+.+..+|....+ ..+|+++|++
T Consensus 193 ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid 272 (393)
T 3k0b_A 193 LVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDID 272 (393)
T ss_dssp HHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESC
T ss_pred HHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECC
Confidence 345667889999999999999998888876432 2569999999
Q ss_pred hHHHHHHHHHHHHhCCcc-eEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCc
Q 014571 296 HNKVMDIQKLAAEMGLKC-ITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 296 ~~rl~~l~~~l~r~g~~n-v~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPC 355 (422)
+.+++.+++|+++.|+.+ |.+.++|+..... ...||.|++|||-
T Consensus 273 ~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~----------------~~~fD~Iv~NPPY 317 (393)
T 3k0b_A 273 ARLIEIAKQNAVEAGLGDLITFRQLQVADFQT----------------EDEYGVVVANPPY 317 (393)
T ss_dssp HHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC----------------CCCSCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCceEEEECChHhCCC----------------CCCCCEEEECCCC
Confidence 999999999999999964 9999999987531 2358999999997
No 135
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.52 E-value=3.8e-07 Score=88.13 Aligned_cols=81 Identities=12% Similarity=0.060 Sum_probs=70.0
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhhhhhccCC
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKAVRRKNE 330 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~~~~~~~~ 330 (422)
.+...+.+++|.+|||+|||+|..+..+++..+ .+|+++|+|+.+++.++++++..|+. ++.+..+|...+
T Consensus 63 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------ 134 (302)
T 3hem_A 63 LALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF------ 134 (302)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC------
T ss_pred HHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc------
Confidence 356677889999999999999999999999864 68999999999999999999999986 799999998653
Q ss_pred CCCCccccCCCCCCCCCceeec
Q 014571 331 SNDEPNMCNSKDNNYITSQTSD 352 (422)
Q Consensus 331 ~~~~~~~~~~~~~~~FD~VLvD 352 (422)
.+.||.|++.
T Consensus 135 ------------~~~fD~v~~~ 144 (302)
T 3hem_A 135 ------------DEPVDRIVSL 144 (302)
T ss_dssp ------------CCCCSEEEEE
T ss_pred ------------CCCccEEEEc
Confidence 2458999863
No 136
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.51 E-value=8.4e-08 Score=93.95 Aligned_cols=103 Identities=14% Similarity=0.086 Sum_probs=72.9
Q ss_pred cCCCCCCeEEEecC------CCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEE-EecchhhhhhccC
Q 014571 257 LDPQKGERILDMCA------APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITT-YKLDALKAVRRKN 329 (422)
Q Consensus 257 L~p~pg~~VLD~CA------gpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~-~~~Da~~~~~~~~ 329 (422)
+.+++|++|||+|| |||+ ..++++++..++|+|+|+++. +.++++ +++|.+....
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~~~--- 120 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCATVHT--- 120 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGGGCCC---
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccccCCc---
Confidence 46789999999999 7788 566777766789999999987 246888 9999876421
Q ss_pred CCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEe
Q 014571 330 ESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVL 406 (422)
Q Consensus 330 ~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~ 406 (422)
.+.||.|++|.++...|. . ..+. .... ....++|+.+.. |+.+|.+++
T Consensus 121 -------------~~~fD~Vvsn~~~~~~g~---~--~~d~-----~~~~------~l~~~~l~~a~r~LkpGG~~v~ 169 (290)
T 2xyq_A 121 -------------ANKWDLIISDMYDPRTKH---V--TKEN-----DSKE------GFFTYLCGFIKQKLALGGSIAV 169 (290)
T ss_dssp -------------SSCEEEEEECCCCCC------C--CSCC-----CCCC------THHHHHHHHHHHHEEEEEEEEE
T ss_pred -------------cCcccEEEEcCCcccccc---c--cccc-----cchH------HHHHHHHHHHHHhcCCCcEEEE
Confidence 246999999987766665 1 1110 1111 134578887765 899999998
No 137
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.51 E-value=3.2e-07 Score=93.12 Aligned_cols=87 Identities=14% Similarity=0.006 Sum_probs=72.5
Q ss_pred HHhcCCCCCCeEEEecCCCChhHHHHHhccCC-------------------------------------CcEEEEEcCCh
Q 014571 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRD-------------------------------------EGEVVAVDRSH 296 (422)
Q Consensus 254 ~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~-------------------------------------~g~V~A~D~s~ 296 (422)
......++++.+||.+||+|+.....|....+ ..+|+++|+++
T Consensus 187 l~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~ 266 (384)
T 3ldg_A 187 ILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDG 266 (384)
T ss_dssp HHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCH
T ss_pred HHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCH
Confidence 35567789999999999999998888865432 25699999999
Q ss_pred HHHHHHHHHHHHhCCcc-eEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCcc
Q 014571 297 NKVMDIQKLAAEMGLKC-ITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKL 356 (422)
Q Consensus 297 ~rl~~l~~~l~r~g~~n-v~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCS 356 (422)
.+++.+++|+++.|+.+ |++.++|+..... ...||.|++|||.-
T Consensus 267 ~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~----------------~~~fD~Iv~NPPYG 311 (384)
T 3ldg_A 267 RMVEIARKNAREVGLEDVVKLKQMRLQDFKT----------------NKINGVLISNPPYG 311 (384)
T ss_dssp HHHHHHHHHHHHTTCTTTEEEEECCGGGCCC----------------CCCSCEEEECCCCT
T ss_pred HHHHHHHHHHHHcCCCCceEEEECChHHCCc----------------cCCcCEEEECCchh
Confidence 99999999999999965 9999999987531 23589999999973
No 138
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.50 E-value=3.3e-07 Score=87.67 Aligned_cols=66 Identities=20% Similarity=0.128 Sum_probs=59.1
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEEEecchhhhh
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKAV 325 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~~~ 325 (422)
+++|++|||+|||+|-.+..++.. ++.++|+|+|+++..++.+++|+++.|+.+ |++..+|+....
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~ 85 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVI 85 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC
T ss_pred CCCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhcc
Confidence 568899999999999999999987 445799999999999999999999999965 999999987643
No 139
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.49 E-value=3.6e-07 Score=86.63 Aligned_cols=66 Identities=20% Similarity=0.157 Sum_probs=59.2
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEEEecchhhhh
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKAV 325 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~~~ 325 (422)
+++|++|||+|||+|-.+..++.. ++.++|+|+|+++..++.+++|+++.|+.+ |++..+|+....
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~ 85 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAF 85 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC
T ss_pred CCCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcc
Confidence 568899999999999999999987 446799999999999999999999999965 999999987653
No 140
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.48 E-value=3.6e-07 Score=85.53 Aligned_cols=78 Identities=14% Similarity=0.153 Sum_probs=66.8
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEEEecchhhhhhccCCCCCCcc
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKAVRRKNESNDEPN 336 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~~~~~~~~~~~~~~ 336 (422)
.+.++.+|||++||+|..+..+++..+ ++|+++|+++.+++.++++++..|+.+ ++++++|+...+.
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---------- 110 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPF---------- 110 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSS----------
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCC----------
Confidence 567899999999999999999999863 499999999999999999999999866 9999999865431
Q ss_pred ccCCCCCCCCCceeec
Q 014571 337 MCNSKDNNYITSQTSD 352 (422)
Q Consensus 337 ~~~~~~~~~FD~VLvD 352 (422)
..+.||.|++.
T Consensus 111 -----~~~~fD~v~~~ 121 (257)
T 3f4k_A 111 -----QNEELDLIWSE 121 (257)
T ss_dssp -----CTTCEEEEEEE
T ss_pred -----CCCCEEEEEec
Confidence 13568999874
No 141
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.48 E-value=4.1e-07 Score=85.97 Aligned_cols=65 Identities=17% Similarity=0.113 Sum_probs=58.3
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEEEecchhhh
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKA 324 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~~ 324 (422)
+++|++|||+|||+|--+..+|.. ++.++|+|+|+++..++.+++|+++.|+.+ |++..+|+...
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~ 78 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAA 78 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhh
Confidence 468899999999999999999986 456799999999999999999999999964 99999998653
No 142
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.47 E-value=3.7e-07 Score=82.73 Aligned_cols=74 Identities=18% Similarity=0.232 Sum_probs=64.3
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCC
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNS 340 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~ 340 (422)
++.+|||+|||+|..+..++... +.++|+++|+++.+++.++++++..|++++.+..+|+.....
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-------------- 129 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPS-------------- 129 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCC--------------
T ss_pred CCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCc--------------
Confidence 58899999999999999999875 457999999999999999999999999889999999875420
Q ss_pred CCCCCCCceee
Q 014571 341 KDNNYITSQTS 351 (422)
Q Consensus 341 ~~~~~FD~VLv 351 (422)
.+.||.|++
T Consensus 130 --~~~~D~i~~ 138 (207)
T 1jsx_A 130 --EPPFDGVIS 138 (207)
T ss_dssp --CSCEEEEEC
T ss_pred --cCCcCEEEE
Confidence 245899987
No 143
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.46 E-value=3e-07 Score=86.09 Aligned_cols=113 Identities=14% Similarity=0.080 Sum_probs=82.7
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCC
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNES 331 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~ 331 (422)
.....+.+++|.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++... .+++++++|....+.
T Consensus 46 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~----- 116 (266)
T 3ujc_A 46 KILSDIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKEF----- 116 (266)
T ss_dssp HHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCCC-----
T ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCCC-----
Confidence 34455567899999999999999999999975 469999999999999999876655 689999999876421
Q ss_pred CCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEehh
Q 014571 332 NDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLTA 408 (422)
Q Consensus 332 ~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t~ 408 (422)
..+.||.|++. ..+.++ .+ .-..++|+++.. |+.+|.++++.
T Consensus 117 ----------~~~~fD~v~~~------~~l~~~----------~~---------~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 117 ----------PENNFDLIYSR------DAILAL----------SL---------ENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp ----------CTTCEEEEEEE------SCGGGS----------CH---------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----------CCCcEEEEeHH------HHHHhc----------Ch---------HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 13569999862 121111 00 123456666654 79999999853
No 144
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.46 E-value=6.6e-07 Score=81.83 Aligned_cols=76 Identities=20% Similarity=0.149 Sum_probs=62.8
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccC
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCN 339 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~ 339 (422)
.++.+|||+|||+|..+..+++.. .+|+++|+++.+++.++++++..+ .+++++++|....+.
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~------------- 99 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLSF------------- 99 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCCS-------------
T ss_pred CCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCCC-------------
Confidence 458899999999999999998873 289999999999999999999887 679999999875321
Q ss_pred CCCCCCCCceeecCC
Q 014571 340 SKDNNYITSQTSDSM 354 (422)
Q Consensus 340 ~~~~~~FD~VLvDaP 354 (422)
..+.||.|++..+
T Consensus 100 --~~~~~D~v~~~~~ 112 (227)
T 1ve3_A 100 --EDKTFDYVIFIDS 112 (227)
T ss_dssp --CTTCEEEEEEESC
T ss_pred --CCCcEEEEEEcCc
Confidence 1346899997543
No 145
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.46 E-value=4.7e-08 Score=98.73 Aligned_cols=142 Identities=13% Similarity=-0.072 Sum_probs=91.1
Q ss_pred cceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEec
Q 014571 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKL 319 (422)
Q Consensus 240 ~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~ 319 (422)
.|.+|--..-....+..+.+.++.+|||+|||+|+.+..+++.++....|+|+|+++..++.+ .++.++++
T Consensus 18 ~g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~ 88 (421)
T 2ih2_A 18 LGRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILA 88 (421)
T ss_dssp ---CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEES
T ss_pred CceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeC
Confidence 455555444556666777776778999999999999999998765567999999999988665 46889999
Q ss_pred chhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhC--CCCCccccccCcccchhHHHHHHHHHHhcc
Q 014571 320 DALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEG--LNGDKSCKEKGRTCGECGMAQEEINALVVG 397 (422)
Q Consensus 320 Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~--p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~ 397 (422)
|..... ..+.||.|+++||....+...++..| .+....+............++..+++.+..
T Consensus 89 D~~~~~----------------~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 152 (421)
T 2ih2_A 89 DFLLWE----------------PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVR 152 (421)
T ss_dssp CGGGCC----------------CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHH
T ss_pred ChhhcC----------------ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHH
Confidence 987532 12469999999999877651100000 000000000000000112356677877755
Q ss_pred -ceeccEEEe
Q 014571 398 -LRIQKVLVL 406 (422)
Q Consensus 398 -lr~~~~~~~ 406 (422)
|+.+|.+++
T Consensus 153 ~Lk~~G~~~~ 162 (421)
T 2ih2_A 153 LLKPGGVLVF 162 (421)
T ss_dssp HEEEEEEEEE
T ss_pred HhCCCCEEEE
Confidence 788888777
No 146
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.45 E-value=4.4e-07 Score=82.02 Aligned_cols=119 Identities=13% Similarity=-0.033 Sum_probs=84.3
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~ 338 (422)
..++.+|||+|||+|..+..+++.. . .+|+++|+++.+++.+++++.. ..++.++++|+...+.
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~-~-~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~~------------ 103 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGG-F-PNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLDF------------ 103 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTT-C-CCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCCS------------
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcC-C-CcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCCC------------
Confidence 3788999999999999999999872 2 3899999999999999998764 4578999999876421
Q ss_pred CCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEehh
Q 014571 339 NSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLTA 408 (422)
Q Consensus 339 ~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t~ 408 (422)
..+.||.|++..+-.... ..++. .|.... +......++|+++.. |+.+|.++++.
T Consensus 104 ---~~~~fD~v~~~~~~~~~~-----~~~~~---~~~~~~----~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 104 ---PSASFDVVLEKGTLDALL-----AGERD---PWTVSS----EGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp ---CSSCEEEEEEESHHHHHT-----TTCSC---TTSCCH----HHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---CCCcccEEEECcchhhhc-----ccccc---cccccc----chhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 135699999765432211 11222 355432 233455677777755 89999998843
No 147
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.45 E-value=6.2e-07 Score=85.04 Aligned_cols=84 Identities=13% Similarity=0.170 Sum_probs=70.3
Q ss_pred HHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCC
Q 014571 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESN 332 (422)
Q Consensus 253 v~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~ 332 (422)
........++.+|||+|||+|..+..+++.. +.++|+++|+++.+++.+++++...|++++.++..|....+.
T Consensus 29 l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~------ 101 (276)
T 3mgg_A 29 LHHDTVYPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPF------ 101 (276)
T ss_dssp HHTTCCCCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCS------
T ss_pred HhhcccCCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCC------
Confidence 3344456789999999999999999999984 457999999999999999999999999999999999886431
Q ss_pred CCccccCCCCCCCCCceeec
Q 014571 333 DEPNMCNSKDNNYITSQTSD 352 (422)
Q Consensus 333 ~~~~~~~~~~~~~FD~VLvD 352 (422)
..+.||.|++.
T Consensus 102 ---------~~~~fD~v~~~ 112 (276)
T 3mgg_A 102 ---------EDSSFDHIFVC 112 (276)
T ss_dssp ---------CTTCEEEEEEE
T ss_pred ---------CCCCeeEEEEe
Confidence 13568999873
No 148
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.45 E-value=2.3e-07 Score=89.07 Aligned_cols=90 Identities=13% Similarity=0.094 Sum_probs=74.0
Q ss_pred eChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhh
Q 014571 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325 (422)
Q Consensus 246 Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 325 (422)
++..+.+.-.++...++.+|||+|||+|..+..+++..++..+|+++|+++.+++.+++++...+. +++++++|+...+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~ 85 (284)
T 3gu3_A 7 DDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIE 85 (284)
T ss_dssp HHHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCC
T ss_pred hHHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcC
Confidence 344555555666788999999999999999999999876568999999999999999999988776 8999999987542
Q ss_pred hccCCCCCCccccCCCCCCCCCceeec
Q 014571 326 RRKNESNDEPNMCNSKDNNYITSQTSD 352 (422)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~FD~VLvD 352 (422)
. .+.||.|++.
T Consensus 86 ~----------------~~~fD~v~~~ 96 (284)
T 3gu3_A 86 L----------------NDKYDIAICH 96 (284)
T ss_dssp C----------------SSCEEEEEEE
T ss_pred c----------------CCCeeEEEEC
Confidence 1 2468999974
No 149
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.43 E-value=8.4e-07 Score=89.36 Aligned_cols=113 Identities=16% Similarity=0.148 Sum_probs=83.3
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh-----C-C--cceEEEecchhhhhhccCC
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM-----G-L--KCITTYKLDALKAVRRKNE 330 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~-----g-~--~nv~~~~~Da~~~~~~~~~ 330 (422)
+.+|.+|||+|||+|..+..+++..++.++|+++|+++.+++.+++++++. | . .+++++++|+........
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~- 159 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEP- 159 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBS-
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhccc-
Confidence 568999999999999999999998866789999999999999999998876 4 3 689999999876532100
Q ss_pred CCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEeh
Q 014571 331 SNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 331 ~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
.+ ...+.||.|++. ..+. |.+. ..++|+++.. |+.+|.++++
T Consensus 160 ~~--------~~~~~fD~V~~~------~~l~-----------~~~d----------~~~~l~~~~r~LkpgG~l~i~ 202 (383)
T 4fsd_A 160 EG--------VPDSSVDIVISN------CVCN-----------LSTN----------KLALFKEIHRVLRDGGELYFS 202 (383)
T ss_dssp CC--------CCTTCEEEEEEE------SCGG-----------GCSC----------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CC--------CCCCCEEEEEEc------cchh-----------cCCC----------HHHHHHHHHHHcCCCCEEEEE
Confidence 01 013579999974 2211 1111 1356666654 8999999985
No 150
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.43 E-value=4.8e-07 Score=85.63 Aligned_cols=72 Identities=18% Similarity=0.212 Sum_probs=62.6
Q ss_pred hHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChH------HHHHHHHHHHHhCC-cceEEEecc
Q 014571 249 PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN------KVMDIQKLAAEMGL-KCITTYKLD 320 (422)
Q Consensus 249 ~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~------rl~~l~~~l~r~g~-~nv~~~~~D 320 (422)
.-......+.+++|.+|||++||+|..+..+++..++.++|+++|+++. +++.++++++..|+ .++.+..+|
T Consensus 31 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d 109 (275)
T 3bkx_A 31 HRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT 109 (275)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC
T ss_pred HHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 3344556678899999999999999999999998766689999999997 99999999998887 579999998
No 151
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.43 E-value=5.8e-07 Score=81.29 Aligned_cols=83 Identities=20% Similarity=0.188 Sum_probs=68.4
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhhhhhccCC
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKAVRRKNE 330 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~~~~~~~~ 330 (422)
.....+.++++ +|||+|||+|..+..+++. +..+|+++|+++.+++.++++++..|+. ++.++++|....+.
T Consensus 35 ~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---- 107 (219)
T 3dlc_A 35 NIINRFGITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPI---- 107 (219)
T ss_dssp HHHHHHCCCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSS----
T ss_pred HHHHhcCCCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCC----
Confidence 34455566777 9999999999999999987 4579999999999999999999999974 79999999876431
Q ss_pred CCCCccccCCCCCCCCCceeec
Q 014571 331 SNDEPNMCNSKDNNYITSQTSD 352 (422)
Q Consensus 331 ~~~~~~~~~~~~~~~FD~VLvD 352 (422)
..+.||.|++.
T Consensus 108 -----------~~~~~D~v~~~ 118 (219)
T 3dlc_A 108 -----------EDNYADLIVSR 118 (219)
T ss_dssp -----------CTTCEEEEEEE
T ss_pred -----------CcccccEEEEC
Confidence 13568999973
No 152
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.42 E-value=5.1e-07 Score=82.68 Aligned_cols=118 Identities=14% Similarity=0.049 Sum_probs=84.2
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-----ceEEEecchhhhhh
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-----CITTYKLDALKAVR 326 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-----nv~~~~~Da~~~~~ 326 (422)
.+...+...++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.++++++..|+. ++.++++|......
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 98 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK 98 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG
T ss_pred HHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc
Confidence 44555666788999999999999999999863 3469999999999999999999888875 79999999743221
Q ss_pred ccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEE
Q 014571 327 RKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLV 405 (422)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~ 405 (422)
..+.||.|++. ..+. +.+. +...++|+.+.. |+.+|+++
T Consensus 99 ---------------~~~~fD~v~~~------~~l~-----------~~~~--------~~~~~~l~~~~~~LkpgG~li 138 (217)
T 3jwh_A 99 ---------------RFHGYDAATVI------EVIE-----------HLDL--------SRLGAFERVLFEFAQPKIVIV 138 (217)
T ss_dssp ---------------GGCSCSEEEEE------SCGG-----------GCCH--------HHHHHHHHHHHTTTCCSEEEE
T ss_pred ---------------cCCCcCEEeeH------HHHH-----------cCCH--------HHHHHHHHHHHHHcCCCEEEE
Confidence 13568999852 1211 1110 122456666654 78888877
Q ss_pred ehhhH
Q 014571 406 LTALI 410 (422)
Q Consensus 406 ~t~~~ 410 (422)
.|...
T Consensus 139 ~~~~~ 143 (217)
T 3jwh_A 139 TTPNI 143 (217)
T ss_dssp EEEBH
T ss_pred EccCc
Confidence 76543
No 153
>2cx0_A Hypothetical protein APE0525; PUA domain, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix} SCOP: b.122.1.1 d.17.6.4 PDB: 2cx1_A* 1zs7_A
Probab=98.42 E-value=1.4e-07 Score=86.72 Aligned_cols=73 Identities=26% Similarity=0.374 Sum_probs=64.8
Q ss_pred CCEEEEccccHHHHHcCCccccCceeeccCCccCCCEEEEeeccccccCCCCchhhhhhhcccCCCCCCCcccCCCceEE
Q 014571 123 PKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYI 202 (422)
Q Consensus 123 ~k~ViVd~~~~eaVlrGA~v~~PGil~~~~~~~~gd~V~v~~~l~~~~~~p~W~~~~~r~~~~~~~~~~~~~~~~~~v~V 202 (422)
+..|+||.++.+++++||++++|||+..+.+|++||.|.|.. +.++..+
T Consensus 92 ~g~v~vd~gA~~al~~GasLl~~GV~~~~g~f~~Gd~V~I~~-------------------------------~~~g~~i 140 (187)
T 2cx0_A 92 KGVVLVDKGAAIALAKGAHLMIPGVVGVEGSFTRGDVVAALY-------------------------------HETRTPV 140 (187)
T ss_dssp SEEEEECHHHHHHHHHTCCEEGGGEEEEEECCCTTCEEEEEE-------------------------------TTTTEEE
T ss_pred CcEEEECccHHHHHhCCCCcCCCccEeCCCCcCCCCEEEEEE-------------------------------CCCCeEE
Confidence 449999999999999999999999999999999999999993 3357899
Q ss_pred EEccCccCHHHH----hcccCcceeecc
Q 014571 203 GQGTAMMSRAGI----FRASEGIAVDMH 226 (422)
Q Consensus 203 rvg~a~msreel----~~~~~GiaV~~~ 226 (422)
++|.+.+|.+|+ .+..+|.+++..
T Consensus 141 A~G~~~~ss~ei~~~~~~~~kG~av~v~ 168 (187)
T 2cx0_A 141 MVGVAEVDSSALEKLYREKARGRAVRRV 168 (187)
T ss_dssp EEEEESSCHHHHHHHHHHTCCSEEEEEE
T ss_pred EEEEEecCHHHHhHHHhccCCceEEEEE
Confidence 999999999999 667889887754
No 154
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.40 E-value=9.2e-07 Score=83.59 Aligned_cols=84 Identities=20% Similarity=0.211 Sum_probs=69.9
Q ss_pred HHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhhhhhccC
Q 014571 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKAVRRKN 329 (422)
Q Consensus 251 ~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~~~~~~~ 329 (422)
......+.+.++.+|||++||+|..+..+++.. ..+|+++|+|+.+++.++++++..|+. ++.++.+|+...+.
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--- 125 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPF--- 125 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS---
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCC---
Confidence 345566778899999999999999999999875 479999999999999999999999975 69999999876431
Q ss_pred CCCCCccccCCCCCCCCCceee
Q 014571 330 ESNDEPNMCNSKDNNYITSQTS 351 (422)
Q Consensus 330 ~~~~~~~~~~~~~~~~FD~VLv 351 (422)
..+.||.|++
T Consensus 126 ------------~~~~fD~v~~ 135 (273)
T 3bus_A 126 ------------EDASFDAVWA 135 (273)
T ss_dssp ------------CTTCEEEEEE
T ss_pred ------------CCCCccEEEE
Confidence 1346898886
No 155
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.38 E-value=4.9e-07 Score=90.04 Aligned_cols=93 Identities=16% Similarity=0.074 Sum_probs=74.8
Q ss_pred HHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCC
Q 014571 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESN 332 (422)
Q Consensus 253 v~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~ 332 (422)
++..|.++||..++|+|+|.||.|..|++.+++.|+|+|+|+++..++.++ ++ .-.+++++.++...+.......
T Consensus 49 vl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL---~~~Rv~lv~~nF~~l~~~L~~~- 123 (347)
T 3tka_A 49 AVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI---DDPRFSIIHGPFSALGEYVAER- 123 (347)
T ss_dssp HHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC---CCTTEEEEESCGGGHHHHHHHT-
T ss_pred HHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh---cCCcEEEEeCCHHHHHHHHHhc-
Confidence 667888999999999999999999999999988999999999999999874 33 3467999998887764321100
Q ss_pred CCccccCCCCCCCCCceeecCCcccc
Q 014571 333 DEPNMCNSKDNNYITSQTSDSMKLHK 358 (422)
Q Consensus 333 ~~~~~~~~~~~~~FD~VLvDaPCSg~ 358 (422)
...+.+|.||.|-.||+.
T Consensus 124 --------g~~~~vDgILfDLGVSS~ 141 (347)
T 3tka_A 124 --------DLIGKIDGILLDLGVSSP 141 (347)
T ss_dssp --------TCTTCEEEEEEECSCCHH
T ss_pred --------CCCCcccEEEECCccCHH
Confidence 012358999999999986
No 156
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.37 E-value=7.7e-07 Score=81.46 Aligned_cols=84 Identities=11% Similarity=0.079 Sum_probs=67.1
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-----ceEEEecchhhhhh
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-----CITTYKLDALKAVR 326 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-----nv~~~~~Da~~~~~ 326 (422)
.+...+...++.+|||++||+|..+..+++.. +..+|+++|+++.+++.+++++...++. +++++++|......
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 98 (219)
T 3jwg_A 20 TVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDK 98 (219)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCG
T ss_pred HHHHHHhhcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccccc
Confidence 44455566788999999999999999999864 3479999999999999999999887765 79999999743321
Q ss_pred ccCCCCCCccccCCCCCCCCCceee
Q 014571 327 RKNESNDEPNMCNSKDNNYITSQTS 351 (422)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~FD~VLv 351 (422)
..+.||.|++
T Consensus 99 ---------------~~~~fD~V~~ 108 (219)
T 3jwg_A 99 ---------------RFSGYDAATV 108 (219)
T ss_dssp ---------------GGTTCSEEEE
T ss_pred ---------------ccCCCCEEEE
Confidence 1356898885
No 157
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.37 E-value=1.1e-06 Score=84.46 Aligned_cols=100 Identities=20% Similarity=0.197 Sum_probs=75.5
Q ss_pred ceEEEeCh-hHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEec
Q 014571 241 GEIFLQNL-PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKL 319 (422)
Q Consensus 241 G~~~~Qd~-~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~ 319 (422)
|.-++.|. -....+..+++.+|++|||+|||+|..|..+++. .++|+|+|+++.+++.++++++. ..+++++++
T Consensus 8 GQnFL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~ 82 (255)
T 3tqs_A 8 GQHFLHDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQN 82 (255)
T ss_dssp -CCEECCHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT--CTTEEEEES
T ss_pred CcccccCHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEc
Confidence 44344443 3344667788999999999999999999999987 26999999999999999998865 468999999
Q ss_pred chhhhhhccCCCCCCccccCCCCCCCCCceeecCCccc
Q 014571 320 DALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLH 357 (422)
Q Consensus 320 Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg 357 (422)
|+.+.+..... ....|| |+.+.|-.-
T Consensus 83 D~~~~~~~~~~-----------~~~~~~-vv~NlPY~i 108 (255)
T 3tqs_A 83 DALQFDFSSVK-----------TDKPLR-VVGNLPYNI 108 (255)
T ss_dssp CTTTCCGGGSC-----------CSSCEE-EEEECCHHH
T ss_pred chHhCCHHHhc-----------cCCCeE-EEecCCccc
Confidence 99886532210 023467 888888754
No 158
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.37 E-value=3.4e-07 Score=89.17 Aligned_cols=89 Identities=13% Similarity=0.084 Sum_probs=73.1
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCC
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNES 331 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~ 331 (422)
-+...|++++|..++|+++|.||.|..|++. .|+|+|+|.++..++.+++ ++. .++.++++|...+..-....
T Consensus 13 e~le~L~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L~~~ 85 (285)
T 1wg8_A 13 EALDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHLAAL 85 (285)
T ss_dssp HHHHHHTCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHHHHT
T ss_pred HHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHHHHc
Confidence 3567788999999999999999999999997 5899999999999999888 644 57999999998764321110
Q ss_pred CCCccccCCCCCCCCCceeecCCccc
Q 014571 332 NDEPNMCNSKDNNYITSQTSDSMKLH 357 (422)
Q Consensus 332 ~~~~~~~~~~~~~~FD~VLvDaPCSg 357 (422)
....||.||.|-+.|+
T Consensus 86 ----------g~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 86 ----------GVERVDGILADLGVSS 101 (285)
T ss_dssp ----------TCSCEEEEEEECSCCH
T ss_pred ----------CCCCcCEEEeCCcccc
Confidence 1246899999999998
No 159
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.36 E-value=2.3e-06 Score=83.71 Aligned_cols=117 Identities=6% Similarity=-0.047 Sum_probs=74.2
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc------ceEEEecchhhhhhccCCCCC
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK------CITTYKLDALKAVRRKNESND 333 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~------nv~~~~~Da~~~~~~~~~~~~ 333 (422)
.+|.+|||+|||+|+-+..++.. +.+.|+|+|+|+.+++.+++++...+.. ++.+.+.|...-..... .+.
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~-l~~ 123 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSS-VRE 123 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHH-HHT
T ss_pred CCCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhh-hhc
Confidence 35889999999999877766653 3468999999999999999998887753 35666766621000000 000
Q ss_pred CccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEehhh
Q 014571 334 EPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLTAL 409 (422)
Q Consensus 334 ~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t~~ 409 (422)
....+.||.|+| .. .. .|.-... + +..+|+++.. |+.||+++.|..
T Consensus 124 ------~~~~~~FD~V~~----~~-~l------------hy~~~~~---~----~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 124 ------VFYFGKFNIIDW----QF-AI------------HYSFHPR---H----YATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp ------TCCSSCEEEEEE----ES-CG------------GGTCSTT---T----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ------cccCCCeeEEEE----Cc-hH------------HHhCCHH---H----HHHHHHHHHHHcCCCCEEEEEeC
Confidence 001357998875 22 22 1211111 1 2477887765 899999998543
No 160
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.35 E-value=2.3e-06 Score=79.00 Aligned_cols=104 Identities=18% Similarity=0.106 Sum_probs=76.3
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccC
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCN 339 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~ 339 (422)
.++.+|||++||+|..+..+++. .+|+++|+++.+++.+++++...+ .++.++++|....+.
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~------------- 93 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMRELEL------------- 93 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGGGCCC-------------
T ss_pred CCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChhhcCC-------------
Confidence 46789999999999999988876 689999999999999999998877 568999999876421
Q ss_pred CCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEeh
Q 014571 340 SKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 340 ~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
.+.||.|++... .+. +... .....++|+++.. |+.+|.++++
T Consensus 94 ---~~~fD~v~~~~~-----~~~-----------~~~~-------~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 94 ---PEPVDAITILCD-----SLN-----------YLQT-------EADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp ---SSCEEEEEECTT-----GGG-----------GCCS-------HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CCCcCEEEEeCC-----chh-----------hcCC-------HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 246899987321 111 1100 1123456666654 7999999983
No 161
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.35 E-value=1.4e-06 Score=79.77 Aligned_cols=108 Identities=17% Similarity=0.102 Sum_probs=79.3
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-----ceEEEecchhhhhhccCCCCC
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-----CITTYKLDALKAVRRKNESND 333 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-----nv~~~~~Da~~~~~~~~~~~~ 333 (422)
++++.+|||+|||+|..+..+++. ..+|+++|+++.+++.++++++..++. ++.++..|....+.
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------- 97 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSF------- 97 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCS-------
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCC-------
Confidence 357899999999999999999987 469999999999999999999888763 68899998865421
Q ss_pred CccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEehh
Q 014571 334 EPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLTA 408 (422)
Q Consensus 334 ~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t~ 408 (422)
..+.||.|++. .. +. +.+.. ....++|+.+.. |+.+|.++++.
T Consensus 98 --------~~~~~D~v~~~------~~---l~--------~~~~~-------~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 98 --------HDSSFDFAVMQ------AF---LT--------SVPDP-------KERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp --------CTTCEEEEEEE------SC---GG--------GCCCH-------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------CCCceeEEEEc------ch---hh--------cCCCH-------HHHHHHHHHHHHHcCCCeEEEEEE
Confidence 13568999973 12 10 11110 122356666654 89999999854
No 162
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.35 E-value=3.6e-07 Score=81.40 Aligned_cols=81 Identities=14% Similarity=0.094 Sum_probs=63.1
Q ss_pred hhHHHHHHhcCC--CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhh
Q 014571 248 LPSIVTAHALDP--QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325 (422)
Q Consensus 248 ~~S~lv~~~L~p--~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 325 (422)
..+...+..++. .++.+|||+|||+|..+..+++.. +|+|+|+++.+++. ..+++++++|+....
T Consensus 8 ~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~~ 74 (170)
T 3q87_B 8 EDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES---------HRGGNLVRADLLCSI 74 (170)
T ss_dssp HHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT---------CSSSCEEECSTTTTB
T ss_pred ccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc---------ccCCeEEECChhhhc
Confidence 344445555665 778899999999999999998863 99999999999987 457889999987521
Q ss_pred hccCCCCCCccccCCCCCCCCCceeecCCccc
Q 014571 326 RRKNESNDEPNMCNSKDNNYITSQTSDSMKLH 357 (422)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg 357 (422)
. .+.||.|++++|-..
T Consensus 75 ~----------------~~~fD~i~~n~~~~~ 90 (170)
T 3q87_B 75 N----------------QESVDVVVFNPPYVP 90 (170)
T ss_dssp C----------------GGGCSEEEECCCCBT
T ss_pred c----------------cCCCCEEEECCCCcc
Confidence 1 256999999888654
No 163
>1iq8_A Archaeosine tRNA-guanine transglycosylase; (alpha/beta)8 barrel, riken structural genomics/proteomics initiative, RSGI; 2.20A {Pyrococcus horikoshii} SCOP: b.122.1.1 c.1.20.1 d.17.6.1 PDB: 1it7_A* 1it8_A* 1j2b_A
Probab=98.35 E-value=5.4e-07 Score=96.04 Aligned_cols=74 Identities=20% Similarity=0.298 Sum_probs=67.6
Q ss_pred CCCEEEEccccHHHHHcCCccccCceeeccCCccCCCEEEEeeccccccCCCCchhhhhhhcccCCCCCCCcccCCCceE
Q 014571 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (422)
Q Consensus 122 ~~k~ViVd~~~~eaVlrGA~v~~PGil~~~~~~~~gd~V~v~~~l~~~~~~p~W~~~~~r~~~~~~~~~~~~~~~~~~v~ 201 (422)
....|+||++|++||++||++++|||++++.+|++||.|.|. ..++..
T Consensus 506 ~~g~v~VD~gA~~av~~GasLl~~GV~~~~g~f~~Gd~V~V~--------------------------------~~~g~~ 553 (582)
T 1iq8_A 506 PRMRVVVNKEAEPFARKGKDVFAKFVIFADPGIRPYDEVLVV--------------------------------NENDEL 553 (582)
T ss_dssp TTTEEEECTTTHHHHHTTCCEEGGGEEEECTTCCTTCEEEEE--------------------------------CTTCCE
T ss_pred CCCEEEECchHHHHHhcCCCcCCCceEecCCCcCCCCEEEEE--------------------------------eCCCCE
Confidence 346999999999999999999999999999999999999999 336789
Q ss_pred EEEccCccCHHHHhcccCcceeeccc
Q 014571 202 IGQGTAMMSRAGIFRASEGIAVDMHN 227 (422)
Q Consensus 202 Vrvg~a~msreel~~~~~GiaV~~~~ 227 (422)
|++|.+.+|.+|+.+..+|++|+...
T Consensus 554 ia~G~a~~ss~ei~~~~kG~aV~v~~ 579 (582)
T 1iq8_A 554 LATGQALLSGREMIVFQYGRAVKVRK 579 (582)
T ss_dssp EEEEEESSCHHHHHHCCSSEEEEEEE
T ss_pred EEEEEEeeCHHHHHhcCCceEEEEEe
Confidence 99999999999999999999998653
No 164
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.33 E-value=2.2e-07 Score=87.55 Aligned_cols=87 Identities=15% Similarity=0.062 Sum_probs=64.2
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhc---cCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhcc
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASL---LRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRK 328 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l---~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~ 328 (422)
+...++...++.+|||+|||+|..|..+|+. +.+.++|+++|+++.+++.++ .++ .+|+++++|+......
T Consensus 72 ~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~-~~v~~~~gD~~~~~~l- 145 (236)
T 2bm8_A 72 VYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDM-ENITLHQGDCSDLTTF- 145 (236)
T ss_dssp HHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGC-TTEEEEECCSSCSGGG-
T ss_pred HHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccC-CceEEEECcchhHHHH-
Confidence 3344455556789999999999999999997 566789999999999988776 222 6799999998764100
Q ss_pred CCCCCCccccCCCCCCCCCceeecCC
Q 014571 329 NESNDEPNMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 329 ~~~~~~~~~~~~~~~~~FD~VLvDaP 354 (422)
+. .....||.|++|+.
T Consensus 146 ---~~-------~~~~~fD~I~~d~~ 161 (236)
T 2bm8_A 146 ---EH-------LREMAHPLIFIDNA 161 (236)
T ss_dssp ---GG-------GSSSCSSEEEEESS
T ss_pred ---Hh-------hccCCCCEEEECCc
Confidence 00 00235999999764
No 165
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.33 E-value=1.1e-06 Score=84.02 Aligned_cols=79 Identities=18% Similarity=0.130 Sum_probs=66.9
Q ss_pred HhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCC
Q 014571 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDE 334 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~ 334 (422)
..+...++.+|||+|||+|..+..+++. ..+|+++|+++.+++.+++++...|+ +++++++|......
T Consensus 114 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~-------- 181 (286)
T 3m70_A 114 DAAKIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANI-------- 181 (286)
T ss_dssp HHHHHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCC--------
T ss_pred HHhhccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccc--------
Confidence 4444558999999999999999999987 35999999999999999999999998 89999999876431
Q ss_pred ccccCCCCCCCCCceeecC
Q 014571 335 PNMCNSKDNNYITSQTSDS 353 (422)
Q Consensus 335 ~~~~~~~~~~~FD~VLvDa 353 (422)
.+.||.|++..
T Consensus 182 --------~~~fD~i~~~~ 192 (286)
T 3m70_A 182 --------QENYDFIVSTV 192 (286)
T ss_dssp --------CSCEEEEEECS
T ss_pred --------cCCccEEEEcc
Confidence 35689999854
No 166
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.32 E-value=1.7e-06 Score=83.39 Aligned_cols=84 Identities=14% Similarity=0.120 Sum_probs=67.5
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh--CCcceEEEecchhhhhhccCCCCCCcc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GLKCITTYKLDALKAVRRKNESNDEPN 336 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~--g~~nv~~~~~Da~~~~~~~~~~~~~~~ 336 (422)
..++.+|||++||+|..+..+++.+.+..+|+++|+|+.+++.++++++.. +..++.++++|+...+..... .
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~--~--- 108 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGAD--S--- 108 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTT--T---
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccc--c---
Confidence 368999999999999999999987645789999999999999999999987 347899999999875432100 0
Q ss_pred ccCCCCCCCCCceee
Q 014571 337 MCNSKDNNYITSQTS 351 (422)
Q Consensus 337 ~~~~~~~~~FD~VLv 351 (422)
...+.||.|++
T Consensus 109 ----~~~~~fD~V~~ 119 (299)
T 3g5t_A 109 ----VDKQKIDMITA 119 (299)
T ss_dssp ----TTSSCEEEEEE
T ss_pred ----ccCCCeeEEeH
Confidence 01257999987
No 167
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.32 E-value=1.1e-06 Score=80.26 Aligned_cols=105 Identities=13% Similarity=0.018 Sum_probs=76.4
Q ss_pred HhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCC
Q 014571 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDE 334 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~ 334 (422)
..+.++++.+|||+|||+|..+..+++. ..+|+++|+++.+++.+++++. .++.++++|+...+.
T Consensus 39 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~-------- 103 (220)
T 3hnr_A 39 EDVVNKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEV-------- 103 (220)
T ss_dssp HHHHHTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCC--------
T ss_pred HHhhccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCC--------
Confidence 3444568999999999999999999987 4699999999999999988755 578899988875421
Q ss_pred ccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEeh
Q 014571 335 PNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 335 ~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
.+.||.|++. ..+. +.+. ..+.++|+.+.. |+.+|.++++
T Consensus 104 --------~~~fD~v~~~------~~l~-----------~~~~--------~~~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 104 --------PTSIDTIVST------YAFH-----------HLTD--------DEKNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp --------CSCCSEEEEE------SCGG-----------GSCH--------HHHHHHHHHHHHHSCTTCEEEEE
T ss_pred --------CCCeEEEEEC------cchh-----------cCCh--------HHHHHHHHHHHHhcCCCCEEEEE
Confidence 1569999973 2211 1111 012456666654 7999999985
No 168
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.32 E-value=8.1e-07 Score=81.03 Aligned_cols=118 Identities=14% Similarity=0.045 Sum_probs=85.6
Q ss_pred eChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhh
Q 014571 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325 (422)
Q Consensus 246 Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 325 (422)
|..-..+....+...++.+|||+|||+|..+..+++. ..+|+++|+++.+++.+++++...+ +++++++|+....
T Consensus 36 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~ 110 (216)
T 3ofk_A 36 RERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRWS--HISWAATDILQFS 110 (216)
T ss_dssp HHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTCS--SEEEEECCTTTCC
T ss_pred HHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccCC--CeEEEEcchhhCC
Confidence 3334455666777889999999999999999999987 3699999999999999999887654 7999999987643
Q ss_pred hccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEE
Q 014571 326 RRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVL 404 (422)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~ 404 (422)
..+.||.|++. ..+. +.+. . ....++|+++.. |+.+|.+
T Consensus 111 ----------------~~~~fD~v~~~------~~l~-----------~~~~------~-~~~~~~l~~~~~~L~pgG~l 150 (216)
T 3ofk_A 111 ----------------TAELFDLIVVA------EVLY-----------YLED------M-TQMRTAIDNMVKMLAPGGHL 150 (216)
T ss_dssp ----------------CSCCEEEEEEE------SCGG-----------GSSS------H-HHHHHHHHHHHHTEEEEEEE
T ss_pred ----------------CCCCccEEEEc------cHHH-----------hCCC------H-HHHHHHHHHHHHHcCCCCEE
Confidence 13568999973 2211 1111 0 122355666644 8999999
Q ss_pred Eehh
Q 014571 405 VLTA 408 (422)
Q Consensus 405 ~~t~ 408 (422)
+++.
T Consensus 151 ~~~~ 154 (216)
T 3ofk_A 151 VFGS 154 (216)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9843
No 169
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.31 E-value=1.6e-06 Score=83.20 Aligned_cols=83 Identities=18% Similarity=0.084 Sum_probs=68.7
Q ss_pred HHHHhc----CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhhhh
Q 014571 252 VTAHAL----DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVR 326 (422)
Q Consensus 252 lv~~~L----~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~~~ 326 (422)
.+...+ .+.++.+|||++||+|..+..+++.. ..+|+++|+++.+++.++++++..|+ .++.++.+|+...+.
T Consensus 69 ~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 146 (297)
T 2o57_A 69 WLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC 146 (297)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS
T ss_pred HHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCC
Confidence 344455 77899999999999999999999875 35999999999999999999999998 479999999876431
Q ss_pred ccCCCCCCccccCCCCCCCCCceee
Q 014571 327 RKNESNDEPNMCNSKDNNYITSQTS 351 (422)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~FD~VLv 351 (422)
. .+.||.|++
T Consensus 147 ~---------------~~~fD~v~~ 156 (297)
T 2o57_A 147 E---------------DNSYDFIWS 156 (297)
T ss_dssp C---------------TTCEEEEEE
T ss_pred C---------------CCCEeEEEe
Confidence 1 246888886
No 170
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.29 E-value=2.1e-06 Score=83.36 Aligned_cols=71 Identities=14% Similarity=0.141 Sum_probs=61.3
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhhh
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKA 324 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~~ 324 (422)
.+...+.+++|.+|||++||+|..+..+++.. ..+|+++|+++.+++.++++++..|+. ++.+..+|...+
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 152 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF 152 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC
T ss_pred HHHHhcCCCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC
Confidence 34556678899999999999999999999876 359999999999999999999998885 599999997653
No 171
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.29 E-value=2.4e-06 Score=81.56 Aligned_cols=69 Identities=19% Similarity=0.139 Sum_probs=59.9
Q ss_pred HHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhh
Q 014571 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALK 323 (422)
Q Consensus 253 v~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~ 323 (422)
+...+.+.+|.+|||++||+|..+..+++..+ .+|+++|+|+.+++.+++++++.|+ .++.+..+|...
T Consensus 56 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 125 (287)
T 1kpg_A 56 ALGKLGLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ 125 (287)
T ss_dssp HHTTTTCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG
T ss_pred HHHHcCCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh
Confidence 44556778999999999999999999996653 4999999999999999999999887 479999999864
No 172
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.28 E-value=2.4e-06 Score=79.73 Aligned_cols=63 Identities=25% Similarity=0.255 Sum_probs=56.0
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
...++.+|||+|||+|..+..+++. ..+|+++|+|+.+++.++++++..|. ++.++++|....
T Consensus 38 ~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~ 100 (252)
T 1wzn_A 38 AKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEI 100 (252)
T ss_dssp CSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGC
T ss_pred cccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhc
Confidence 4567889999999999999999986 36899999999999999999998886 689999998764
No 173
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.28 E-value=1.7e-06 Score=88.60 Aligned_cols=73 Identities=11% Similarity=0.054 Sum_probs=60.5
Q ss_pred HHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHH-------HHhCC--cceEEEecchhh
Q 014571 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA-------AEMGL--KCITTYKLDALK 323 (422)
Q Consensus 253 v~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l-------~r~g~--~nv~~~~~Da~~ 323 (422)
+...+.+++|++|||+|||+|.-+..+|...+ ..+|+|+|+++.+++.+++++ +.+|+ .+|+++++|+..
T Consensus 165 il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~ 243 (438)
T 3uwp_A 165 MIDEIKMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS 243 (438)
T ss_dssp HHHHHCCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTS
T ss_pred HHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccC
Confidence 44566899999999999999999999998753 457999999999988888764 45676 689999999987
Q ss_pred hhh
Q 014571 324 AVR 326 (422)
Q Consensus 324 ~~~ 326 (422)
.+.
T Consensus 244 lp~ 246 (438)
T 3uwp_A 244 EEW 246 (438)
T ss_dssp HHH
T ss_pred Ccc
Confidence 654
No 174
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.28 E-value=1.5e-07 Score=91.38 Aligned_cols=73 Identities=16% Similarity=0.071 Sum_probs=53.3
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHH---HHhCCcceEEE--ecchhhhhhccCCCCC
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA---AEMGLKCITTY--KLDALKAVRRKNESND 333 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l---~r~g~~nv~~~--~~Da~~~~~~~~~~~~ 333 (422)
+++|.+|||+|||||+.|..+++. ++|+|+|+++ ++..++++. +.+| .++.++ ++|++.++
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~-~~v~~~~~~~D~~~l~-------- 145 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFG-WNLITFKSKVDVTKME-------- 145 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTT-GGGEEEECSCCGGGCC--------
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcC-CCeEEEeccCcHhhCC--------
Confidence 578999999999999999999987 6899999998 432221110 0111 178888 88887632
Q ss_pred CccccCCCCCCCCCceeecCC
Q 014571 334 EPNMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 334 ~~~~~~~~~~~~FD~VLvDaP 354 (422)
.+.||.|++|..
T Consensus 146 ---------~~~fD~Vvsd~~ 157 (276)
T 2wa2_A 146 ---------PFQADTVLCDIG 157 (276)
T ss_dssp ---------CCCCSEEEECCC
T ss_pred ---------CCCcCEEEECCC
Confidence 245899999866
No 175
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.27 E-value=1.3e-07 Score=91.17 Aligned_cols=74 Identities=16% Similarity=0.113 Sum_probs=53.2
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHH---HHHhCCcceEEE--ecchhhhhhccCCCC
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKL---AAEMGLKCITTY--KLDALKAVRRKNESN 332 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~---l~r~g~~nv~~~--~~Da~~~~~~~~~~~ 332 (422)
.+++|.+|||+|||||+.|..+++. ++|+|+|+++ ++..++++ .+.+| .++.++ ++|++.++
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~-~~v~~~~~~~D~~~l~------- 137 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYG-WNIVKFKSRVDIHTLP------- 137 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTT-GGGEEEECSCCTTTSC-------
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccC-CCeEEEecccCHhHCC-------
Confidence 3678999999999999999999886 6899999998 43221111 01111 168888 88887632
Q ss_pred CCccccCCCCCCCCCceeecCC
Q 014571 333 DEPNMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 333 ~~~~~~~~~~~~~FD~VLvDaP 354 (422)
.+.||.|++|..
T Consensus 138 ----------~~~fD~V~sd~~ 149 (265)
T 2oxt_A 138 ----------VERTDVIMCDVG 149 (265)
T ss_dssp ----------CCCCSEEEECCC
T ss_pred ----------CCCCcEEEEeCc
Confidence 246899999866
No 176
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.25 E-value=1.9e-06 Score=81.60 Aligned_cols=94 Identities=11% Similarity=0.021 Sum_probs=72.8
Q ss_pred EeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 245 LQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 245 ~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.+..-...++..+++.++++|||+|||+|..|..+++.. ++|+|+|+++.+++.++++++. ..+++++++|+.+.
T Consensus 14 ~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 14 TSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQF 88 (244)
T ss_dssp CCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGGC
T ss_pred CCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHhC
Confidence 333344456667788899999999999999999999873 7999999999999999998764 36899999999875
Q ss_pred hhccCCCCCCccccCCCCCCCCCceeecCCcccc
Q 014571 325 VRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK 358 (422)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~ 358 (422)
+... ...| .|+.+.|-.-+
T Consensus 89 ~~~~--------------~~~~-~vv~nlPy~~~ 107 (244)
T 1qam_A 89 KFPK--------------NQSY-KIFGNIPYNIS 107 (244)
T ss_dssp CCCS--------------SCCC-EEEEECCGGGH
T ss_pred Cccc--------------CCCe-EEEEeCCcccC
Confidence 4210 1234 58888887643
No 177
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.25 E-value=2.6e-06 Score=80.99 Aligned_cols=83 Identities=17% Similarity=0.165 Sum_probs=66.6
Q ss_pred HHHHHhcC--CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhcc
Q 014571 251 IVTAHALD--PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRK 328 (422)
Q Consensus 251 ~lv~~~L~--p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~ 328 (422)
.++...+. +++|.+|||++||+|..+..++.+ + .+|+++|+++.+++.+++|+++.|+. +.+..+|......
T Consensus 108 ~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~-g--~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~~~-- 181 (254)
T 2nxc_A 108 RLALKALARHLRPGDKVLDLGTGSGVLAIAAEKL-G--GKALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAALP-- 181 (254)
T ss_dssp HHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHT-T--CEEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHHGG--
T ss_pred HHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHh-C--CeEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhcCc--
Confidence 34444443 578999999999999999988875 2 29999999999999999999999987 8999999876311
Q ss_pred CCCCCCccccCCCCCCCCCceeecC
Q 014571 329 NESNDEPNMCNSKDNNYITSQTSDS 353 (422)
Q Consensus 329 ~~~~~~~~~~~~~~~~~FD~VLvDa 353 (422)
.+.||.|+++.
T Consensus 182 --------------~~~fD~Vv~n~ 192 (254)
T 2nxc_A 182 --------------FGPFDLLVANL 192 (254)
T ss_dssp --------------GCCEEEEEEEC
T ss_pred --------------CCCCCEEEECC
Confidence 23589999864
No 178
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.24 E-value=1.7e-06 Score=83.70 Aligned_cols=78 Identities=21% Similarity=0.279 Sum_probs=65.0
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh--C---------CcceEEEecchhhhhhcc
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--G---------LKCITTYKLDALKAVRRK 328 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~--g---------~~nv~~~~~Da~~~~~~~ 328 (422)
.++.+|||+|||+|+.+..+++. +.++|+++|+++..++.+++++ ++ + -++++++.+|+......
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~- 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN- 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-
Confidence 45689999999999999999987 4579999999999999999988 54 3 35799999999875432
Q ss_pred CCCCCCccccCCCCCCCCCceeecCCc
Q 014571 329 NESNDEPNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 329 ~~~~~~~~~~~~~~~~~FD~VLvDaPC 355 (422)
.+.||.|++|+|+
T Consensus 150 --------------~~~fD~Ii~d~~~ 162 (281)
T 1mjf_A 150 --------------NRGFDVIIADSTD 162 (281)
T ss_dssp --------------CCCEEEEEEECCC
T ss_pred --------------cCCeeEEEECCCC
Confidence 1358999999986
No 179
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.24 E-value=2e-06 Score=91.10 Aligned_cols=108 Identities=9% Similarity=0.002 Sum_probs=83.5
Q ss_pred cceEEEeChhHHHHHHhcC----CCCCCeEEEecCCCChhHHHHHhccC--CCcEEEEEcCChHHHHHHHHHHHHhCC--
Q 014571 240 EGEIFLQNLPSIVTAHALD----PQKGERILDMCAAPGGKTTAIASLLR--DEGEVVAVDRSHNKVMDIQKLAAEMGL-- 311 (422)
Q Consensus 240 ~G~~~~Qd~~S~lv~~~L~----p~pg~~VLD~CAgpGgKT~~la~l~~--~~g~V~A~D~s~~rl~~l~~~l~r~g~-- 311 (422)
.|.||-=..-+.+.+.++. ++++.+|+|.|||+|+....+++.+. +...++|+|+++..+..++.|+...|+
T Consensus 196 ~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~ 275 (542)
T 3lkd_A 196 AGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPI 275 (542)
T ss_dssp CSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCG
T ss_pred CCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCc
Confidence 4555443444566666666 67899999999999999999988864 356899999999999999999999998
Q ss_pred cceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccC
Q 014571 312 KCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKE 359 (422)
Q Consensus 312 ~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G 359 (422)
.++.+.++|+...... ......||.|+.+||-++..
T Consensus 276 ~~~~I~~gDtL~~d~p------------~~~~~~fD~IvaNPPf~~~~ 311 (542)
T 3lkd_A 276 ENQFLHNADTLDEDWP------------TQEPTNFDGVLMNPPYSAKW 311 (542)
T ss_dssp GGEEEEESCTTTSCSC------------CSSCCCBSEEEECCCTTCCC
T ss_pred CccceEecceeccccc------------ccccccccEEEecCCcCCcc
Confidence 5789999997653110 01135799999999999643
No 180
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.24 E-value=6.2e-07 Score=82.14 Aligned_cols=66 Identities=17% Similarity=0.092 Sum_probs=54.9
Q ss_pred cCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHH------------hCCcceEEEecchhhh
Q 014571 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAE------------MGLKCITTYKLDALKA 324 (422)
Q Consensus 257 L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r------------~g~~nv~~~~~Da~~~ 324 (422)
+.+.++.+|||++||+|.-+..+++. ..+|+|+|+|+.+++.++++++. .+..+++++++|+..+
T Consensus 18 l~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l 94 (203)
T 1pjz_A 18 LNVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL 94 (203)
T ss_dssp HCCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred cccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence 45678999999999999999999987 35899999999999999987643 1235799999998765
Q ss_pred h
Q 014571 325 V 325 (422)
Q Consensus 325 ~ 325 (422)
+
T Consensus 95 ~ 95 (203)
T 1pjz_A 95 T 95 (203)
T ss_dssp T
T ss_pred C
Confidence 4
No 181
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.23 E-value=2.8e-06 Score=92.51 Aligned_cols=89 Identities=16% Similarity=0.029 Sum_probs=72.1
Q ss_pred HHhcCCCCCCeEEEecCCCChhHHHHHhccC-----------------------------------------CCcEEEEE
Q 014571 254 AHALDPQKGERILDMCAAPGGKTTAIASLLR-----------------------------------------DEGEVVAV 292 (422)
Q Consensus 254 ~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~-----------------------------------------~~g~V~A~ 292 (422)
+....+++++.|||.|||+|+..+.+|.... ....|+|+
T Consensus 183 l~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~ 262 (703)
T 3v97_A 183 VMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGS 262 (703)
T ss_dssp HHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_pred HHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEE
Confidence 3455778999999999999999888876531 12589999
Q ss_pred cCChHHHHHHHHHHHHhCCcc-eEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCc
Q 014571 293 DRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 293 D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPC 355 (422)
|+++..++.+++|+++.|+.+ |.+.++|+..+... . ..+.||.|+++||-
T Consensus 263 Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~-----~--------~~~~~d~Iv~NPPY 313 (703)
T 3v97_A 263 DSDARVIQRARTNARLAGIGELITFEVKDVAQLTNP-----L--------PKGPYGTVLSNPPY 313 (703)
T ss_dssp ESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCS-----C--------TTCCCCEEEECCCC
T ss_pred ECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccc-----c--------ccCCCCEEEeCCCc
Confidence 999999999999999999976 99999999874211 1 02368999999997
No 182
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.23 E-value=7.5e-06 Score=79.48 Aligned_cols=115 Identities=12% Similarity=0.046 Sum_probs=79.6
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh-------CCcceEEEecchhhhhhccCCCC
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM-------GLKCITTYKLDALKAVRRKNESN 332 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~-------g~~nv~~~~~Da~~~~~~~~~~~ 332 (422)
.++.+|||+|||+|..+..+++. +..+|+++|+++.+++.++++.... +..++.++++|....+.... .+
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~ 109 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDK-FR 109 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTT-CS
T ss_pred CCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhh-cc
Confidence 47889999999999999999884 3579999999999999999998876 44579999999876531100 00
Q ss_pred CCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEehh
Q 014571 333 DEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLTA 408 (422)
Q Consensus 333 ~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t~ 408 (422)
...+.||.|++. . . ..|..... +....+|+++.. |+.+|.+++|.
T Consensus 110 --------~~~~~fD~V~~~----~--~-----------l~~~~~~~------~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 110 --------DPQMCFDICSCQ----F--V-----------CHYSFESY------EQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp --------STTCCEEEEEEE----T--C-----------GGGGGGSH------HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred --------cCCCCEEEEEEe----c--c-----------hhhccCCH------HHHHHHHHHHHHHhCCCcEEEEec
Confidence 013469999861 1 2 12331111 123467777755 89999999853
No 183
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.21 E-value=3.1e-06 Score=76.28 Aligned_cols=103 Identities=24% Similarity=0.203 Sum_probs=77.1
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~ 338 (422)
..++ +|||++||+|..+..+++. ..+|+++|+++.+++.++++++..|. ++.+.++|....+.
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~------------ 90 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFDI------------ 90 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBSC------------
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcCC------------
Confidence 4567 9999999999999999886 35999999999999999999998887 79999999876421
Q ss_pred CCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEehh
Q 014571 339 NSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLTA 408 (422)
Q Consensus 339 ~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t~ 408 (422)
..+.||.|++. ... +. .....++|+.+.. ++.+|.++++.
T Consensus 91 ---~~~~fD~v~~~-----~~~-------------~~---------~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 91 ---VADAWEGIVSI-----FCH-------------LP---------SSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp ---CTTTCSEEEEE-----CCC-------------CC---------HHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred ---CcCCccEEEEE-----hhc-------------CC---------HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 13569999861 112 10 0123456666644 78899888853
No 184
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.21 E-value=1.5e-06 Score=79.54 Aligned_cols=72 Identities=22% Similarity=0.196 Sum_probs=59.2
Q ss_pred HHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHH----HHhCCcceEEEecchhhhh
Q 014571 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLA----AEMGLKCITTYKLDALKAV 325 (422)
Q Consensus 253 v~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l----~r~g~~nv~~~~~Da~~~~ 325 (422)
....+.++++.+|||+|||+|..+..+++.. +.++|+++|+|+.+++.+.+++ ++.+++++.++++|+..++
T Consensus 19 ~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~ 94 (218)
T 3mq2_A 19 EFEQLRSQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP 94 (218)
T ss_dssp HHHHHHTTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC
T ss_pred HHHHhhccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC
Confidence 4455668899999999999999999999974 4689999999999988755444 3467789999999998754
No 185
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.19 E-value=1.9e-07 Score=88.24 Aligned_cols=97 Identities=9% Similarity=0.018 Sum_probs=78.1
Q ss_pred EEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchh
Q 014571 243 IFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (422)
Q Consensus 243 ~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~ 322 (422)
|..+..-...++..+++.+|++|||+|||+|..|..+++.. ++|+|+|+++.+++.++++++ +..+++++++|+.
T Consensus 11 fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~ 85 (245)
T 1yub_A 11 FLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDIL 85 (245)
T ss_dssp BCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCT
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhc--cCCceEEEECChh
Confidence 45566666777888899999999999999999999999872 799999999999999888776 4568999999988
Q ss_pred hhhhccCCCCCCccccCCCCCCCCCceeecCCccccC
Q 014571 323 KAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKE 359 (422)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G 359 (422)
+.+.. ..+.| .|+.++|...+.
T Consensus 86 ~~~~~--------------~~~~f-~vv~n~Py~~~~ 107 (245)
T 1yub_A 86 QFQFP--------------NKQRY-KIVGNIPYHLST 107 (245)
T ss_dssp TTTCC--------------CSSEE-EEEEECCSSSCH
T ss_pred hcCcc--------------cCCCc-EEEEeCCccccH
Confidence 65321 01357 799999987753
No 186
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.19 E-value=4.8e-06 Score=79.49 Aligned_cols=75 Identities=15% Similarity=0.122 Sum_probs=63.4
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhhhhccCCCCCCccccC
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVRRKNESNDEPNMCN 339 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~~~~~~~~~~~~~~~~ 339 (422)
++.+|||++||+|..+..+++. ..+|+++|+++.+++.++++++..|+ .++.++++|+...+..
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------------ 132 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH------------ 132 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG------------
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh------------
Confidence 3789999999999999999987 46999999999999999999999998 6899999999876421
Q ss_pred CCCCCCCCceeec
Q 014571 340 SKDNNYITSQTSD 352 (422)
Q Consensus 340 ~~~~~~FD~VLvD 352 (422)
..+.||.|++.
T Consensus 133 --~~~~fD~v~~~ 143 (285)
T 4htf_A 133 --LETPVDLILFH 143 (285)
T ss_dssp --CSSCEEEEEEE
T ss_pred --cCCCceEEEEC
Confidence 13568999973
No 187
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.19 E-value=4e-06 Score=83.28 Aligned_cols=82 Identities=17% Similarity=0.070 Sum_probs=67.1
Q ss_pred HHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhhhhccCCCC
Q 014571 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVRRKNESN 332 (422)
Q Consensus 254 ~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~~~~~~~~~ 332 (422)
...+...++.+|||++||+|..+..+++. +..+|+|+|.++ +++.++++++..|+ .+++++.+|+.....
T Consensus 57 ~~~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~------ 127 (340)
T 2fyt_A 57 YQNPHIFKDKVVLDVGCGTGILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL------ 127 (340)
T ss_dssp HHCGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC------
T ss_pred HhhhhhcCCCEEEEeeccCcHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC------
Confidence 34455678999999999999999999886 346999999996 99999999999998 689999999876421
Q ss_pred CCccccCCCCCCCCCceeecC
Q 014571 333 DEPNMCNSKDNNYITSQTSDS 353 (422)
Q Consensus 333 ~~~~~~~~~~~~~FD~VLvDa 353 (422)
..+.||.|+++.
T Consensus 128 ---------~~~~~D~Ivs~~ 139 (340)
T 2fyt_A 128 ---------PVEKVDVIISEW 139 (340)
T ss_dssp ---------SCSCEEEEEECC
T ss_pred ---------CCCcEEEEEEcC
Confidence 125689999854
No 188
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.19 E-value=3.4e-06 Score=78.85 Aligned_cols=75 Identities=8% Similarity=0.013 Sum_probs=62.3
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccc
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNM 337 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~ 337 (422)
.+.++.+|||+|||+|..+..+++. .++|+++|+|+.+++.+++++ ..+..++.++.+|+...+.
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~----------- 100 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPL----------- 100 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCS-----------
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCC-----------
Confidence 5678999999999999999999986 479999999999999999988 4455789999999865421
Q ss_pred cCCCCCCCCCceee
Q 014571 338 CNSKDNNYITSQTS 351 (422)
Q Consensus 338 ~~~~~~~~FD~VLv 351 (422)
..+.||.|++
T Consensus 101 ----~~~~fD~v~~ 110 (263)
T 2yqz_A 101 ----PDESVHGVIV 110 (263)
T ss_dssp ----CTTCEEEEEE
T ss_pred ----CCCCeeEEEE
Confidence 1346899887
No 189
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.18 E-value=1.3e-06 Score=81.76 Aligned_cols=65 Identities=15% Similarity=0.020 Sum_probs=55.6
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCC-hHHHHHH---HHHHHHhCCcceEEEecchhhh
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRS-HNKVMDI---QKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s-~~rl~~l---~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.+++++|||+|||+|..+..+|+.. +.+.|+|+|+| +.+++.+ ++++++.|+.|+.++++|+..+
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l 90 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESL 90 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBC
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHh
Confidence 4689999999999999999998753 46899999999 6666655 8888888999999999998875
No 190
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.18 E-value=3.2e-06 Score=78.20 Aligned_cols=60 Identities=10% Similarity=-0.048 Sum_probs=51.7
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchh
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDAL 322 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~ 322 (422)
.+.++|||++||.|..+..++.... ..+++|+|+|+.+++.+++++++.|.. ++++ .|..
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p-~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~ 108 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENE-KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKE 108 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSC-CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccc
Confidence 4577999999999999999988754 459999999999999999999999997 6776 4543
No 191
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.18 E-value=3.1e-06 Score=79.07 Aligned_cols=84 Identities=11% Similarity=0.044 Sum_probs=67.2
Q ss_pred eChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhh
Q 014571 246 QNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325 (422)
Q Consensus 246 Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 325 (422)
|.....-....+.+.++.+|||++||+|..+..+++.. +.++|+++|+++.+++.++++ ..++.++.+|+...+
T Consensus 18 ~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~ 91 (259)
T 2p35_A 18 RTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWK 91 (259)
T ss_dssp GGHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcC
Confidence 44455555666778899999999999999999999886 357999999999999999887 467899999987543
Q ss_pred hccCCCCCCccccCCCCCCCCCceee
Q 014571 326 RRKNESNDEPNMCNSKDNNYITSQTS 351 (422)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~FD~VLv 351 (422)
. .+.||.|++
T Consensus 92 -~---------------~~~fD~v~~ 101 (259)
T 2p35_A 92 -P---------------AQKADLLYA 101 (259)
T ss_dssp -C---------------SSCEEEEEE
T ss_pred -c---------------cCCcCEEEE
Confidence 1 245888887
No 192
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.18 E-value=1.9e-06 Score=80.19 Aligned_cols=76 Identities=16% Similarity=0.054 Sum_probs=62.7
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccC
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCN 339 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~ 339 (422)
.++.+|||+|||+|..+..+++.. ...|+++|+++.+++.+++++...|..++.++.+|+...+.
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~------------- 142 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTP------------- 142 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCC-------------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCC-------------
Confidence 368999999999999999888764 46999999999999999999888766679999999775431
Q ss_pred CCCCCCCCceeec
Q 014571 340 SKDNNYITSQTSD 352 (422)
Q Consensus 340 ~~~~~~FD~VLvD 352 (422)
..+.||.|+++
T Consensus 143 --~~~~fD~v~~~ 153 (241)
T 2ex4_A 143 --EPDSYDVIWIQ 153 (241)
T ss_dssp --CSSCEEEEEEE
T ss_pred --CCCCEEEEEEc
Confidence 13469999974
No 193
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.18 E-value=2.3e-06 Score=83.63 Aligned_cols=81 Identities=10% Similarity=0.056 Sum_probs=63.9
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhC-----CcceEEEecchhhhhhccCCCCCC
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG-----LKCITTYKLDALKAVRRKNESNDE 334 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g-----~~nv~~~~~Da~~~~~~~~~~~~~ 334 (422)
.++.+|||+|||.|+-+..+++.. +..+|+++|+++..++.+++++...+ -++++++.+|+..+...
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~------- 153 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ------- 153 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C-------
T ss_pred CCCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh-------
Confidence 346799999999999999999863 45799999999999999999988752 35799999999875421
Q ss_pred ccccCCCCCCCCCceeecCCc
Q 014571 335 PNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 335 ~~~~~~~~~~~FD~VLvDaPC 355 (422)
..+.||.|++|++.
T Consensus 154 -------~~~~fDvIi~D~~~ 167 (294)
T 3adn_A 154 -------TSQTFDVIISDCTD 167 (294)
T ss_dssp -------CCCCEEEEEECC--
T ss_pred -------cCCCccEEEECCCC
Confidence 13569999999874
No 194
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.17 E-value=4.9e-06 Score=82.77 Aligned_cols=83 Identities=16% Similarity=0.080 Sum_probs=67.5
Q ss_pred HHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhhhhccCCC
Q 014571 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVRRKNES 331 (422)
Q Consensus 253 v~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~~~~~~~~ 331 (422)
+...+...++.+|||+|||+|..+..+++. +.++|+|+|.++ +++.++++++..|+ .+++++.+|.....
T Consensus 42 i~~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~------ 112 (348)
T 2y1w_A 42 ILQNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS------ 112 (348)
T ss_dssp HHHTGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC------
T ss_pred HHhccccCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC------
Confidence 344556678999999999999999999886 346999999996 88999999999998 67999999987542
Q ss_pred CCCccccCCCCCCCCCceeecCC
Q 014571 332 NDEPNMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 332 ~~~~~~~~~~~~~~FD~VLvDaP 354 (422)
..+.||.|+++.+
T Consensus 113 ----------~~~~~D~Ivs~~~ 125 (348)
T 2y1w_A 113 ----------LPEQVDIIISEPM 125 (348)
T ss_dssp ----------CSSCEEEEEECCC
T ss_pred ----------CCCceeEEEEeCc
Confidence 1246899998654
No 195
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.16 E-value=3.4e-06 Score=81.29 Aligned_cols=56 Identities=13% Similarity=-0.010 Sum_probs=48.9
Q ss_pred HHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh
Q 014571 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM 309 (422)
Q Consensus 251 ~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~ 309 (422)
..+...+.+++|.+|||++||+|..|..+++. .++|+|+|+|+.+++.++++++..
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~ 90 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR 90 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS
T ss_pred HHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc
Confidence 44566778899999999999999999999986 368999999999999999987654
No 196
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.16 E-value=5.5e-06 Score=75.01 Aligned_cols=109 Identities=13% Similarity=0.077 Sum_probs=78.7
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCC
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNES 331 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~ 331 (422)
+...+....++.+|||+|||+|..+..+++. ..+|+++|+++.+++.+++ .|..++.++++|+....
T Consensus 37 ~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~~------ 103 (218)
T 3ou2_A 37 ALERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDWT------ 103 (218)
T ss_dssp HHHHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSCC------
T ss_pred HHHHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccCC------
Confidence 3444444778899999999999999999988 4699999999999999887 67788999999986541
Q ss_pred CCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEehh
Q 014571 332 NDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLTA 408 (422)
Q Consensus 332 ~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t~ 408 (422)
..+.||.|++. ..+. +.+. +....+|+++.. |+.+|.++++.
T Consensus 104 ----------~~~~~D~v~~~------~~l~-----------~~~~--------~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 104 ----------PDRQWDAVFFA------HWLA-----------HVPD--------DRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp ----------CSSCEEEEEEE------SCGG-----------GSCH--------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----------CCCceeEEEEe------chhh-----------cCCH--------HHHHHHHHHHHHHcCCCeEEEEEe
Confidence 13568999973 1211 1110 123456666644 78888888853
No 197
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.16 E-value=3e-06 Score=81.67 Aligned_cols=111 Identities=19% Similarity=0.131 Sum_probs=80.2
Q ss_pred HHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC---cceEEEecchhhhhhccCC
Q 014571 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL---KCITTYKLDALKAVRRKNE 330 (422)
Q Consensus 254 ~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~---~nv~~~~~Da~~~~~~~~~ 330 (422)
...+.++++ +|||++||+|..+..+++. ..+|+++|+++.+++.+++++...+. .++.++++|+..++.
T Consensus 76 ~~~~~~~~~-~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~---- 147 (299)
T 3g2m_A 76 ATRTGPVSG-PVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL---- 147 (299)
T ss_dssp HHHHCCCCS-CEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC----
T ss_pred HHhhCCCCC-cEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc----
Confidence 344445455 9999999999999999987 36899999999999999999998875 679999999876421
Q ss_pred CCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEehh
Q 014571 331 SNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLTA 408 (422)
Q Consensus 331 ~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t~ 408 (422)
.+.||.|++. ... + .|.. ...+.++|+++.. |+.+|.++++.
T Consensus 148 ------------~~~fD~v~~~-----~~~---~--------~~~~--------~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 148 ------------DKRFGTVVIS-----SGS---I--------NELD--------EADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp ------------SCCEEEEEEC-----HHH---H--------TTSC--------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------CCCcCEEEEC-----Ccc---c--------ccCC--------HHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 3568988861 122 1 0111 0123456666654 78999988843
No 198
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.15 E-value=4.8e-06 Score=82.91 Aligned_cols=82 Identities=11% Similarity=0.105 Sum_probs=66.7
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh--CC--cceEEEecchhhhhhccCCCCCC
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GL--KCITTYKLDALKAVRRKNESNDE 334 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~--g~--~nv~~~~~Da~~~~~~~~~~~~~ 334 (422)
...+.+|||+|||.|+.+..+++.. +..+|+++|+++.+++.+++++.++ |+ .+++++.+|+..+....
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~------ 190 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNA------ 190 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTS------
T ss_pred CCCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhc------
Confidence 4466899999999999999999863 4579999999999999999998875 44 57999999998764311
Q ss_pred ccccCCCCCCCCCceeecCC
Q 014571 335 PNMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 335 ~~~~~~~~~~~FD~VLvDaP 354 (422)
..+.||.|++|++
T Consensus 191 -------~~~~fDlIi~d~~ 203 (334)
T 1xj5_A 191 -------AEGSYDAVIVDSS 203 (334)
T ss_dssp -------CTTCEEEEEECCC
T ss_pred -------cCCCccEEEECCC
Confidence 0246999999975
No 199
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.15 E-value=4.2e-06 Score=79.65 Aligned_cols=78 Identities=18% Similarity=0.165 Sum_probs=64.6
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhhhhccCCCCCCccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVRRKNESNDEPNM 337 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~~~~~~~~~~~~~~ 337 (422)
+.++.+|||+|||+|..+..+++. +.++|+++|+++.+++.+++++...|. .++.++++|+...+..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---------- 129 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD---------- 129 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC----------
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC----------
Confidence 468899999999999999998876 346999999999999999999998887 5799999998764210
Q ss_pred cCCCCCCCCCceeec
Q 014571 338 CNSKDNNYITSQTSD 352 (422)
Q Consensus 338 ~~~~~~~~FD~VLvD 352 (422)
..+.||.|++.
T Consensus 130 ----~~~~fD~v~~~ 140 (298)
T 1ri5_A 130 ----LGKEFDVISSQ 140 (298)
T ss_dssp ----CSSCEEEEEEE
T ss_pred ----CCCCcCEEEEC
Confidence 13568999875
No 200
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.14 E-value=5.9e-06 Score=76.08 Aligned_cols=71 Identities=18% Similarity=0.075 Sum_probs=61.2
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCC
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNS 340 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~ 340 (422)
++.+|||+|||+|..+..+++. ..+|+++|+++.+++.+++++...+. ++.++++|....+.
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~-------------- 98 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNI-------------- 98 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCC--------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCc--------------
Confidence 7889999999999999999987 35899999999999999999998886 78999999876421
Q ss_pred CCCCCCCceee
Q 014571 341 KDNNYITSQTS 351 (422)
Q Consensus 341 ~~~~~FD~VLv 351 (422)
.+.||.|++
T Consensus 99 --~~~fD~v~~ 107 (246)
T 1y8c_A 99 --NRKFDLITC 107 (246)
T ss_dssp --SCCEEEEEE
T ss_pred --cCCceEEEE
Confidence 245899986
No 201
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.14 E-value=5.5e-06 Score=80.48 Aligned_cols=73 Identities=18% Similarity=0.194 Sum_probs=61.8
Q ss_pred HHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCC-CcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhh
Q 014571 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326 (422)
Q Consensus 250 S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~-~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~ 326 (422)
...++..+++++|++|||+|||+|..|..+++.... .++|+|+|+++.+++.++++. ..+++++++|+.+++.
T Consensus 31 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~~~ 104 (279)
T 3uzu_A 31 IDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTFDF 104 (279)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGCCG
T ss_pred HHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcCCh
Confidence 344566778999999999999999999999987543 366999999999999999983 4689999999998754
No 202
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.13 E-value=4.9e-06 Score=91.48 Aligned_cols=73 Identities=14% Similarity=0.168 Sum_probs=61.6
Q ss_pred HHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh------CCcceEEEecchhhhh
Q 014571 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM------GLKCITTYKLDALKAV 325 (422)
Q Consensus 253 v~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~------g~~nv~~~~~Da~~~~ 325 (422)
+...+...++.+|||+|||+|..+..+++..++..+|+|+|+++.+++.++++++.. |+.+++++++|+..++
T Consensus 713 LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp 791 (950)
T 3htx_A 713 ALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFD 791 (950)
T ss_dssp HHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCC
T ss_pred HHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCC
Confidence 445556678999999999999999999988544579999999999999999987753 6778999999998754
No 203
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.13 E-value=4.4e-06 Score=80.88 Aligned_cols=97 Identities=15% Similarity=0.046 Sum_probs=75.4
Q ss_pred ceEEEeCh-hHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEec
Q 014571 241 GEIFLQNL-PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKL 319 (422)
Q Consensus 241 G~~~~Qd~-~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~ 319 (422)
|.-++.|. -....+..+++.+| +|||+|||+|..|..+++.. ++|+|+|+++.+++.+++++. -.+++++++
T Consensus 26 GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~---~~~v~vi~~ 98 (271)
T 3fut_A 26 GQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLS---GLPVRLVFQ 98 (271)
T ss_dssp SCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTT---TSSEEEEES
T ss_pred CccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcC---CCCEEEEEC
Confidence 44444443 34456677789999 99999999999999999973 689999999999999999875 258999999
Q ss_pred chhhhhhccCCCCCCccccCCCCCCCCCceeecCCcccc
Q 014571 320 DALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK 358 (422)
Q Consensus 320 Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~ 358 (422)
|+.++.... ...||.|+...|-.-+
T Consensus 99 D~l~~~~~~--------------~~~~~~iv~NlPy~is 123 (271)
T 3fut_A 99 DALLYPWEE--------------VPQGSLLVANLPYHIA 123 (271)
T ss_dssp CGGGSCGGG--------------SCTTEEEEEEECSSCC
T ss_pred ChhhCChhh--------------ccCccEEEecCccccc
Confidence 998764321 1137889988887654
No 204
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.12 E-value=6.2e-06 Score=83.04 Aligned_cols=79 Identities=14% Similarity=0.082 Sum_probs=66.6
Q ss_pred hcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEEEecchhhhhhccCCCCCC
Q 014571 256 ALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKAVRRKNESNDE 334 (422)
Q Consensus 256 ~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~~~~~~~~~~~~ 334 (422)
.+...+|.+|||++||+|..+..+++. +..+|+|+|.+ .+++.++++++..|+.+ |+++++|+..+..
T Consensus 58 ~~~~~~~~~VLDlGcGtG~ls~~la~~--g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------- 126 (376)
T 3r0q_C 58 NKHHFEGKTVLDVGTGSGILAIWSAQA--GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL-------- 126 (376)
T ss_dssp TTTTTTTCEEEEESCTTTHHHHHHHHT--TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC--------
T ss_pred ccccCCCCEEEEeccCcCHHHHHHHhc--CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc--------
Confidence 345678999999999999999999987 33599999999 99999999999999865 9999999876531
Q ss_pred ccccCCCCCCCCCceeecC
Q 014571 335 PNMCNSKDNNYITSQTSDS 353 (422)
Q Consensus 335 ~~~~~~~~~~~FD~VLvDa 353 (422)
.+.||.|+++.
T Consensus 127 --------~~~~D~Iv~~~ 137 (376)
T 3r0q_C 127 --------PEKVDVIISEW 137 (376)
T ss_dssp --------SSCEEEEEECC
T ss_pred --------CCcceEEEEcC
Confidence 25689999865
No 205
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.12 E-value=5.2e-06 Score=85.54 Aligned_cols=68 Identities=12% Similarity=0.058 Sum_probs=58.9
Q ss_pred HHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHH-------HHHHHHhC--CcceEEEecchh
Q 014571 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDI-------QKLAAEMG--LKCITTYKLDAL 322 (422)
Q Consensus 254 ~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l-------~~~l~r~g--~~nv~~~~~Da~ 322 (422)
...+++++|++|||+|||+|.-+..+|...+ ..+|+|+|+++..++.+ +++++..| +.+++++++|..
T Consensus 235 l~~l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~ 311 (433)
T 1u2z_A 235 YQQCQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF 311 (433)
T ss_dssp HHHTTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS
T ss_pred HHhcCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcc
Confidence 3556788999999999999999999999764 46899999999988888 99999999 578999988654
No 206
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.11 E-value=2.7e-06 Score=82.35 Aligned_cols=49 Identities=18% Similarity=0.225 Sum_probs=41.8
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhC
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG 310 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g 310 (422)
++.+|||++||+|..+..+++..+ ..+|+++|+++.+++.++++++..+
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~ 94 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYL 94 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC----
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhh
Confidence 789999999999999999999875 3699999999999999999987765
No 207
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.11 E-value=5.5e-06 Score=79.91 Aligned_cols=80 Identities=16% Similarity=0.147 Sum_probs=65.6
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh--CC--cceEEEecchhhhhhccCCCCCCcc
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GL--KCITTYKLDALKAVRRKNESNDEPN 336 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~--g~--~nv~~~~~Da~~~~~~~~~~~~~~~ 336 (422)
.+.+|||+|||.|+-+..+++.. +..+|+++|+++..++.+++++..+ ++ ++++++.+|+.......
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-------- 145 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS-------- 145 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC--------
T ss_pred CCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC--------
Confidence 46799999999999999998763 4579999999999999999998763 33 57999999998764311
Q ss_pred ccCCCCCCCCCceeecCCc
Q 014571 337 MCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 337 ~~~~~~~~~FD~VLvDaPC 355 (422)
.+.||.|++|+|.
T Consensus 146 ------~~~fD~Ii~d~~~ 158 (275)
T 1iy9_A 146 ------ENQYDVIMVDSTE 158 (275)
T ss_dssp ------CSCEEEEEESCSS
T ss_pred ------CCCeeEEEECCCC
Confidence 3569999999875
No 208
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.11 E-value=6e-06 Score=80.98 Aligned_cols=82 Identities=15% Similarity=0.191 Sum_probs=66.3
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh--CC--cceEEEecchhhhhhccCCCCCC
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GL--KCITTYKLDALKAVRRKNESNDE 334 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~--g~--~nv~~~~~Da~~~~~~~~~~~~~ 334 (422)
...+.+|||+|||.|+.+..+++.. +..+|+++|+++..++.+++++... ++ ++++++.+|+......
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~------- 164 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ------- 164 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT-------
T ss_pred CCCCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhh-------
Confidence 3456899999999999999998863 4579999999999999999998763 33 5799999999875431
Q ss_pred ccccCCCCCCCCCceeecCCc
Q 014571 335 PNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 335 ~~~~~~~~~~~FD~VLvDaPC 355 (422)
..+.||.|++|+|.
T Consensus 165 -------~~~~fD~Ii~d~~~ 178 (304)
T 2o07_A 165 -------NQDAFDVIITDSSD 178 (304)
T ss_dssp -------CSSCEEEEEEECC-
T ss_pred -------CCCCceEEEECCCC
Confidence 13569999999874
No 209
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.10 E-value=6.3e-06 Score=82.07 Aligned_cols=78 Identities=17% Similarity=0.066 Sum_probs=65.5
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEEEecchhhhhhccCCCCCCccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKAVRRKNESNDEPNM 337 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~~~~~~~~~~~~~~~ 337 (422)
+.+|.+|||++||+|..+..+++. +..+|+|+|++ .+++.++++++..|+.+ |+++++|+.....
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~----------- 129 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVEL----------- 129 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCC-----------
T ss_pred cCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccC-----------
Confidence 457899999999999999999987 45699999999 59999999999999866 9999999876521
Q ss_pred cCCCCCCCCCceeecCC
Q 014571 338 CNSKDNNYITSQTSDSM 354 (422)
Q Consensus 338 ~~~~~~~~FD~VLvDaP 354 (422)
..+.||.|+++.+
T Consensus 130 ----~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 130 ----PVEKVDIIISEWM 142 (349)
T ss_dssp ----SSSCEEEEEECCC
T ss_pred ----CCCceEEEEEccc
Confidence 1356999998653
No 210
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.09 E-value=3.4e-06 Score=80.33 Aligned_cols=65 Identities=26% Similarity=0.272 Sum_probs=55.0
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.+...+.+.++.+|||++||+|..+..+++ ..++|+++|+|+.+++.+++++ .++.+..+|+..+
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~ 112 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNF 112 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTC
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhC
Confidence 344667788999999999999999999998 3579999999999999988764 5788888888754
No 211
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.09 E-value=6.1e-06 Score=79.86 Aligned_cols=82 Identities=12% Similarity=0.101 Sum_probs=66.4
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhC----CcceEEEecchhhhhhccCCCCCC
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG----LKCITTYKLDALKAVRRKNESNDE 334 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g----~~nv~~~~~Da~~~~~~~~~~~~~ 334 (422)
..++.+|||+|||.|+.+..+++.. +..+|+++|+++..++.+++++..++ -++++++.+|+.......
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 148 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------ 148 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC------
Confidence 3456899999999999999998763 45799999999999999999887653 367999999998764321
Q ss_pred ccccCCCCCCCCCceeecCCc
Q 014571 335 PNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 335 ~~~~~~~~~~~FD~VLvDaPC 355 (422)
.+.||.|++|++.
T Consensus 149 --------~~~fD~Ii~d~~~ 161 (283)
T 2i7c_A 149 --------TNTYDVIIVDSSD 161 (283)
T ss_dssp --------CSCEEEEEEECCC
T ss_pred --------CCCceEEEEcCCC
Confidence 3569999999754
No 212
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.09 E-value=6.3e-06 Score=85.94 Aligned_cols=81 Identities=16% Similarity=0.089 Sum_probs=66.3
Q ss_pred HhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhhhhccCCCCC
Q 014571 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVRRKNESND 333 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~~~~~~~~~~ 333 (422)
..+...++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.+++++++.|+ .+|+++.+|.....
T Consensus 152 ~~l~~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~-------- 220 (480)
T 3b3j_A 152 QNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS-------- 220 (480)
T ss_dssp HTGGGTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--------
T ss_pred HhhhhcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc--------
Confidence 3445567899999999999999988874 456999999998 99999999999998 67999999987531
Q ss_pred CccccCCCCCCCCCceeecCC
Q 014571 334 EPNMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 334 ~~~~~~~~~~~~FD~VLvDaP 354 (422)
..+.||.|+++++
T Consensus 221 --------~~~~fD~Ivs~~~ 233 (480)
T 3b3j_A 221 --------LPEQVDIIISEPM 233 (480)
T ss_dssp --------CSSCEEEEECCCC
T ss_pred --------cCCCeEEEEEeCc
Confidence 1246899998654
No 213
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.08 E-value=7.5e-06 Score=75.72 Aligned_cols=73 Identities=11% Similarity=0.017 Sum_probs=58.8
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~ 338 (422)
+.++.+|||+|||+|..+..+++. ..+|+++|+++.+++.++++ ..+++++++|..... +.
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~------~~----- 106 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN-----APHADVYEWNGKGEL------PA----- 106 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSC------CT-----
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhcc------CC-----
Confidence 468899999999999999999987 46999999999999999987 467999999985321 00
Q ss_pred CCCCCCCCCceeec
Q 014571 339 NSKDNNYITSQTSD 352 (422)
Q Consensus 339 ~~~~~~~FD~VLvD 352 (422)
...+.||.|++.
T Consensus 107 --~~~~~fD~v~~~ 118 (226)
T 3m33_A 107 --GLGAPFGLIVSR 118 (226)
T ss_dssp --TCCCCEEEEEEE
T ss_pred --cCCCCEEEEEeC
Confidence 013569999885
No 214
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.08 E-value=7.4e-06 Score=76.51 Aligned_cols=79 Identities=11% Similarity=0.052 Sum_probs=63.2
Q ss_pred HHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCC
Q 014571 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESN 332 (422)
Q Consensus 253 v~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~ 332 (422)
....+...++.+|||++||+|..+..+++.. ..+|+++|+++.+++.+++++. ..++.++++|+...+.
T Consensus 36 l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~------ 104 (253)
T 3g5l_A 36 LKKMLPDFNQKTVLDLGCGFGWHCIYAAEHG--AKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAI------ 104 (253)
T ss_dssp HHTTCCCCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCC------
T ss_pred HHHhhhccCCCEEEEECCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCC------
Confidence 3445566689999999999999999999872 2399999999999999998765 4679999999876431
Q ss_pred CCccccCCCCCCCCCceee
Q 014571 333 DEPNMCNSKDNNYITSQTS 351 (422)
Q Consensus 333 ~~~~~~~~~~~~~FD~VLv 351 (422)
..+.||.|++
T Consensus 105 ---------~~~~fD~v~~ 114 (253)
T 3g5l_A 105 ---------EPDAYNVVLS 114 (253)
T ss_dssp ---------CTTCEEEEEE
T ss_pred ---------CCCCeEEEEE
Confidence 1356899987
No 215
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.08 E-value=6.6e-06 Score=78.43 Aligned_cols=78 Identities=15% Similarity=0.039 Sum_probs=60.5
Q ss_pred cCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHH-----------------hCCcceEEEec
Q 014571 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAE-----------------MGLKCITTYKL 319 (422)
Q Consensus 257 L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r-----------------~g~~nv~~~~~ 319 (422)
+.+.++.+|||++||+|.-+..||+. ...|+|+|+|+.+++.++++... ....+|.++++
T Consensus 64 ~~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 140 (252)
T 2gb4_A 64 LKGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCC 140 (252)
T ss_dssp HTTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES
T ss_pred ccCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEEC
Confidence 34568899999999999999999986 35899999999999998775431 01257999999
Q ss_pred chhhhhhccCCCCCCccccCCCCCCCCCceee
Q 014571 320 DALKAVRRKNESNDEPNMCNSKDNNYITSQTS 351 (422)
Q Consensus 320 Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLv 351 (422)
|+..++... .+.||.|+.
T Consensus 141 D~~~l~~~~--------------~~~FD~V~~ 158 (252)
T 2gb4_A 141 SIFDLPRAN--------------IGKFDRIWD 158 (252)
T ss_dssp CTTTGGGGC--------------CCCEEEEEE
T ss_pred ccccCCccc--------------CCCEEEEEE
Confidence 998764311 246998884
No 216
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.07 E-value=6.4e-06 Score=76.65 Aligned_cols=79 Identities=15% Similarity=0.026 Sum_probs=63.8
Q ss_pred HHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCC
Q 014571 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESND 333 (422)
Q Consensus 254 ~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~ 333 (422)
...+...++.+|||++||+|..+..+++.. ..+|+++|+++.+++.+++++... .++.++++|....+.
T Consensus 86 l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~------- 154 (254)
T 1xtp_A 86 IASLPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETATL------- 154 (254)
T ss_dssp HHTSTTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCCC-------
T ss_pred HHhhcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCCC-------
Confidence 344566789999999999999999998874 458999999999999999987654 679999999876421
Q ss_pred CccccCCCCCCCCCceee
Q 014571 334 EPNMCNSKDNNYITSQTS 351 (422)
Q Consensus 334 ~~~~~~~~~~~~FD~VLv 351 (422)
..+.||.|++
T Consensus 155 --------~~~~fD~v~~ 164 (254)
T 1xtp_A 155 --------PPNTYDLIVI 164 (254)
T ss_dssp --------CSSCEEEEEE
T ss_pred --------CCCCeEEEEE
Confidence 1356899986
No 217
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.06 E-value=6.2e-06 Score=78.67 Aligned_cols=90 Identities=11% Similarity=0.078 Sum_probs=70.6
Q ss_pred hHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhcc
Q 014571 249 PSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRK 328 (422)
Q Consensus 249 ~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~ 328 (422)
-....+..+++.++++|||+|||+|..|..+++. +.++|+|+|+++.+++.++++ +..+++++++|+.+.+...
T Consensus 19 i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~~~~~~~ 92 (249)
T 3ftd_A 19 VLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH--PLKKLYVIELDREMVENLKSI----GDERLEVINEDASKFPFCS 92 (249)
T ss_dssp HHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTTTCCGGG
T ss_pred HHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchhhCChhH
Confidence 3344567778899999999999999999999986 247999999999999999987 3468999999998765322
Q ss_pred CCCCCCccccCCCCCCCCCceeecCCcccc
Q 014571 329 NESNDEPNMCNSKDNNYITSQTSDSMKLHK 358 (422)
Q Consensus 329 ~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~ 358 (422)
. ... ..|+.+.|-.-+
T Consensus 93 ~-------------~~~-~~vv~NlPy~i~ 108 (249)
T 3ftd_A 93 L-------------GKE-LKVVGNLPYNVA 108 (249)
T ss_dssp S-------------CSS-EEEEEECCTTTH
T ss_pred c-------------cCC-cEEEEECchhcc
Confidence 1 112 378888888543
No 218
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.05 E-value=5.3e-06 Score=81.99 Aligned_cols=80 Identities=14% Similarity=0.126 Sum_probs=65.1
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh--C--CcceEEEecchhhhhhccCCCCCCc
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--G--LKCITTYKLDALKAVRRKNESNDEP 335 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~--g--~~nv~~~~~Da~~~~~~~~~~~~~~ 335 (422)
.++.+|||+|||+|+.+..+++.. +..+|+++|+++..++.+++++..+ + -++++++.+|+.......
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------- 186 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------- 186 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-------
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc-------
Confidence 456899999999999999998763 3579999999999999999998763 2 357999999998754311
Q ss_pred cccCCCCCCCCCceeecCC
Q 014571 336 NMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 336 ~~~~~~~~~~FD~VLvDaP 354 (422)
.+.||.|++|++
T Consensus 187 -------~~~fDvIi~d~~ 198 (321)
T 2pt6_A 187 -------TNTYDVIIVDSS 198 (321)
T ss_dssp -------CSCEEEEEEECC
T ss_pred -------CCCceEEEECCc
Confidence 246999999975
No 219
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.05 E-value=1.2e-05 Score=78.58 Aligned_cols=83 Identities=18% Similarity=0.104 Sum_probs=65.8
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh----CCcceEEEecchhhhhhccCCCCCC
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM----GLKCITTYKLDALKAVRRKNESNDE 334 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~----g~~nv~~~~~Da~~~~~~~~~~~~~ 334 (422)
..++.+|||+|||.|+.+..+++.. +..+|+++|+++..++.+++++..+ .-.+++++.+|+.......
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~------ 165 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQT------ 165 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSS------
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhc------
Confidence 3567899999999999999999763 4579999999999999999987542 2357999999998865321
Q ss_pred ccccCCCCCCCCCceeecCCc
Q 014571 335 PNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 335 ~~~~~~~~~~~FD~VLvDaPC 355 (422)
..+.||.|++|.+.
T Consensus 166 -------~~~~fDvIi~d~~~ 179 (304)
T 3bwc_A 166 -------PDNTYDVVIIDTTD 179 (304)
T ss_dssp -------CTTCEEEEEEECC-
T ss_pred -------cCCceeEEEECCCC
Confidence 13569999998764
No 220
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.04 E-value=9e-06 Score=79.90 Aligned_cols=81 Identities=16% Similarity=0.068 Sum_probs=65.8
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh--C---CcceEEEecchhhhhhccCCCCCC
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--G---LKCITTYKLDALKAVRRKNESNDE 334 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~--g---~~nv~~~~~Da~~~~~~~~~~~~~ 334 (422)
..+.+|||+|||.|+-+..+++.. +..+|+++|+++..++.+++++..+ | -++++++.+|+.......
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 148 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT------ 148 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC------
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc------
Confidence 355799999999999999998863 3579999999999999999998762 2 467999999998764321
Q ss_pred ccccCCCCCCCCCceeecCCc
Q 014571 335 PNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 335 ~~~~~~~~~~~FD~VLvDaPC 355 (422)
.+.||.|++|++.
T Consensus 149 --------~~~fD~Ii~d~~~ 161 (314)
T 1uir_A 149 --------EERYDVVIIDLTD 161 (314)
T ss_dssp --------CCCEEEEEEECCC
T ss_pred --------CCCccEEEECCCC
Confidence 3469999999764
No 221
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.04 E-value=4.2e-06 Score=79.17 Aligned_cols=78 Identities=21% Similarity=0.098 Sum_probs=61.8
Q ss_pred HHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCC
Q 014571 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNE 330 (422)
Q Consensus 251 ~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~ 330 (422)
..+...+.+.++.+|||+|||+|..+..+++ +.++|+++|+|+.+++.++++. ++.++++|+...+.
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~~---- 90 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLAL---- 90 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSCCS----
T ss_pred HHHHHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhCCC----
Confidence 3455666778999999999999999999997 3579999999999888776653 79999999875431
Q ss_pred CCCCccccCCCCCCCCCceeec
Q 014571 331 SNDEPNMCNSKDNNYITSQTSD 352 (422)
Q Consensus 331 ~~~~~~~~~~~~~~~FD~VLvD 352 (422)
..+.||.|++-
T Consensus 91 -----------~~~~fD~v~~~ 101 (261)
T 3ege_A 91 -----------PDKSVDGVISI 101 (261)
T ss_dssp -----------CTTCBSEEEEE
T ss_pred -----------CCCCEeEEEEc
Confidence 13568999873
No 222
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.03 E-value=1.8e-05 Score=72.73 Aligned_cols=102 Identities=13% Similarity=0.089 Sum_probs=73.7
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccC
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCN 339 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~ 339 (422)
.++.+|||+|||+|..+..+++.. .+|+++|+++.+++.+++++ .++.++.+|....+.
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~------------- 97 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFRL------------- 97 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCCC-------------
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHccc-------------
Confidence 578899999999999999999874 38999999999999998863 568899998865321
Q ss_pred CCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEehh
Q 014571 340 SKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLTA 408 (422)
Q Consensus 340 ~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t~ 408 (422)
.+.||.|++ + .+.+. +.+. .....++|+++.. |+.+|.++++.
T Consensus 98 ---~~~~D~v~~----~-~~~~~-----------~~~~-------~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 98 ---GRKFSAVVS----M-FSSVG-----------YLKT-------TEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp ---SSCEEEEEE----C-TTGGG-----------GCCS-------HHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred ---CCCCcEEEE----c-CchHh-----------hcCC-------HHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 346899985 1 12211 1111 1134566776654 89999999963
No 223
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.03 E-value=9.2e-06 Score=73.27 Aligned_cols=109 Identities=12% Similarity=-0.001 Sum_probs=76.5
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccc
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNM 337 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~ 337 (422)
...++.+|||++||+|..+..++... ..+|+++|.|+.+++.++++++..+ .++.+.++|+...+.
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~----------- 85 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENN-FKLNISKGDIRKLPF----------- 85 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHT-CCCCEEECCTTSCCS-----------
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcC-CceEEEECchhhCCC-----------
Confidence 45678999999999999866555442 4699999999999999999998877 468889999875421
Q ss_pred cCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEehhh
Q 014571 338 CNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLTAL 409 (422)
Q Consensus 338 ~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t~~ 409 (422)
..+.||.|++. +.+. .+.+ .-..++|+++.. |+.+|.++++.+
T Consensus 86 ----~~~~fD~v~~~------~~l~----------~~~~---------~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 86 ----KDESMSFVYSY------GTIF----------HMRK---------NDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp ----CTTCEEEEEEC------SCGG----------GSCH---------HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----CCCceeEEEEc------ChHH----------hCCH---------HHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 13568999862 2211 1110 123455666544 899999998543
No 224
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.03 E-value=8.7e-06 Score=80.33 Aligned_cols=80 Identities=20% Similarity=0.101 Sum_probs=65.3
Q ss_pred cCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhhhhhccCCCCCCc
Q 014571 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKAVRRKNESNDEP 335 (422)
Q Consensus 257 L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~~~~~~~~~~~~~ 335 (422)
+...++.+|||++||+|..+..+++. +..+|+|+|.+ .+++.++++++..|+. +|+++.+|+.....
T Consensus 34 ~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--------- 101 (328)
T 1g6q_1 34 KDLFKDKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHL--------- 101 (328)
T ss_dssp HHHHTTCEEEEETCTTSHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCC---------
T ss_pred HhhcCCCEEEEecCccHHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccC---------
Confidence 34567899999999999999988886 34699999999 6999999999999985 59999999876421
Q ss_pred cccCCCCCCCCCceeecCC
Q 014571 336 NMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 336 ~~~~~~~~~~FD~VLvDaP 354 (422)
..+.||.|+++.+
T Consensus 102 ------~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 102 ------PFPKVDIIISEWM 114 (328)
T ss_dssp ------SSSCEEEEEECCC
T ss_pred ------CCCcccEEEEeCc
Confidence 1256899998765
No 225
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.02 E-value=3.2e-06 Score=89.49 Aligned_cols=104 Identities=13% Similarity=0.109 Sum_probs=78.6
Q ss_pred cceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCC--------------CcEEEEEcCChHHHHHHHHH
Q 014571 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD--------------EGEVVAVDRSHNKVMDIQKL 305 (422)
Q Consensus 240 ~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~--------------~g~V~A~D~s~~rl~~l~~~ 305 (422)
.|.||--..-+.+.+.++.|++| +|||.|||+|+....++..+.. ...++|+|+++..++.++.|
T Consensus 224 ~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~N 302 (544)
T 3khk_A 224 GGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMN 302 (544)
T ss_dssp STTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHH
T ss_pred CCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHH
Confidence 45555545556777888899888 9999999999998887665421 35899999999999999999
Q ss_pred HHHhCCc-ceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCcccc
Q 014571 306 AAEMGLK-CITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHK 358 (422)
Q Consensus 306 l~r~g~~-nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~ 358 (422)
+...|+. ++.+.++|+...+. .....||.|+.+||-+..
T Consensus 303 l~l~gi~~~i~i~~gDtL~~~~--------------~~~~~fD~Iv~NPPf~~~ 342 (544)
T 3khk_A 303 MVIRGIDFNFGKKNADSFLDDQ--------------HPDLRADFVMTNPPFNMK 342 (544)
T ss_dssp HHHTTCCCBCCSSSCCTTTSCS--------------CTTCCEEEEEECCCSSCC
T ss_pred HHHhCCCcccceeccchhcCcc--------------cccccccEEEECCCcCCc
Confidence 9988874 34446677653210 113579999999999874
No 226
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.02 E-value=1.3e-05 Score=77.24 Aligned_cols=62 Identities=11% Similarity=0.033 Sum_probs=47.4
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcC-ChHHHHHHHHHH-----HHhCCc-----ceEEEecchh
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDR-SHNKVMDIQKLA-----AEMGLK-----CITTYKLDAL 322 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~-s~~rl~~l~~~l-----~r~g~~-----nv~~~~~Da~ 322 (422)
..+|.+|||+|||+|..+..++.. +.++|+++|+ ++..++.+++|+ +..|+. ++.+...|..
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~--~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~ 149 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLA--GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWG 149 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHT--TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTT
T ss_pred hcCCCeEEEecccccHHHHHHHHc--CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCC
Confidence 457889999999999999988875 2359999999 899999999999 666664 6888766543
No 227
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.02 E-value=8.9e-06 Score=75.01 Aligned_cols=80 Identities=18% Similarity=0.073 Sum_probs=63.4
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCC
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNES 331 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~ 331 (422)
.+...+...++.+|||+|||+|..+..+++. +..+|+++|+++.+++.++++... .++.++++|....+.
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~~----- 103 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLHL----- 103 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCCC-----
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhccC-----
Confidence 4566777788999999999999999999987 234999999999999999876543 468999999876431
Q ss_pred CCCccccCCCCCCCCCceee
Q 014571 332 NDEPNMCNSKDNNYITSQTS 351 (422)
Q Consensus 332 ~~~~~~~~~~~~~~FD~VLv 351 (422)
..+.||.|++
T Consensus 104 ----------~~~~fD~v~~ 113 (243)
T 3bkw_A 104 ----------PQDSFDLAYS 113 (243)
T ss_dssp ----------CTTCEEEEEE
T ss_pred ----------CCCCceEEEE
Confidence 1346898886
No 228
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.99 E-value=1.4e-05 Score=84.84 Aligned_cols=76 Identities=14% Similarity=0.069 Sum_probs=64.6
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccC
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCN 339 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~ 339 (422)
..+-+|||++||.|-.|..||++ .+.|+++|.++..++.++..++..|..+|.+.++|+..+....
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~----------- 130 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAAL----------- 130 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHC-----------
T ss_pred CCCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhc-----------
Confidence 34679999999999999999997 4799999999999999999999888778999999998764321
Q ss_pred CCCCCCCCceee
Q 014571 340 SKDNNYITSQTS 351 (422)
Q Consensus 340 ~~~~~~FD~VLv 351 (422)
..+.||.|++
T Consensus 131 --~~~~fD~v~~ 140 (569)
T 4azs_A 131 --EEGEFDLAIG 140 (569)
T ss_dssp --CTTSCSEEEE
T ss_pred --cCCCccEEEE
Confidence 1356999886
No 229
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.98 E-value=8e-06 Score=80.59 Aligned_cols=80 Identities=15% Similarity=0.179 Sum_probs=65.6
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh--CC--cceEEEecchhhhhhccCCCCCCc
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--GL--KCITTYKLDALKAVRRKNESNDEP 335 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~--g~--~nv~~~~~Da~~~~~~~~~~~~~~ 335 (422)
..+.+|||+|||.|+-+..+++.. +.++|+++|+++..++.+++++... |+ ++++++.+|+......
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~-------- 177 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN-------- 177 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH--------
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHh--------
Confidence 345799999999999999998863 4579999999999999999998765 33 5799999999876432
Q ss_pred cccCCCCCCCCCceeecCC
Q 014571 336 NMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 336 ~~~~~~~~~~FD~VLvDaP 354 (422)
..+.||.|++|++
T Consensus 178 ------~~~~fD~Ii~d~~ 190 (314)
T 2b2c_A 178 ------HKNEFDVIITDSS 190 (314)
T ss_dssp ------CTTCEEEEEECCC
T ss_pred ------cCCCceEEEEcCC
Confidence 1356999999986
No 230
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.98 E-value=5e-06 Score=79.40 Aligned_cols=122 Identities=12% Similarity=0.028 Sum_probs=83.7
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC----cceEEEecchhhhhhc
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL----KCITTYKLDALKAVRR 327 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~----~nv~~~~~Da~~~~~~ 327 (422)
.+...+...++.+|||+|||+|..+..+++. ..+|+++|+|+.+++.+++++...+. .++.+..+|+...+..
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 124 (293)
T 3thr_A 48 WLLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKD 124 (293)
T ss_dssp HHHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHH
T ss_pred HHHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccc
Confidence 4445556678899999999999999999987 34999999999999999998865442 4688888998776421
Q ss_pred cCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEe
Q 014571 328 KNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVL 406 (422)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~ 406 (422)
. . ..+.||.|++ .|... .++ ++.. . -......+|+++.. |+.+|.+++
T Consensus 125 ~--~----------~~~~fD~V~~----~g~~l-~~~---~~~~-------~----~~~~~~~~l~~~~~~LkpgG~l~~ 173 (293)
T 3thr_A 125 V--P----------AGDGFDAVIC----LGNSF-AHL---PDSK-------G----DQSEHRLALKNIASMVRPGGLLVI 173 (293)
T ss_dssp S--C----------CTTCEEEEEE----CTTCG-GGS---CCSS-------S----SSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred c--c----------cCCCeEEEEE----cChHH-hhc---Cccc-------c----CHHHHHHHHHHHHHHcCCCeEEEE
Confidence 1 0 1356999997 11111 101 1110 0 01234567777755 899999998
Q ss_pred h
Q 014571 407 T 407 (422)
Q Consensus 407 t 407 (422)
+
T Consensus 174 ~ 174 (293)
T 3thr_A 174 D 174 (293)
T ss_dssp E
T ss_pred E
Confidence 4
No 231
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.97 E-value=1.4e-05 Score=70.61 Aligned_cols=72 Identities=13% Similarity=-0.000 Sum_probs=58.2
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~ 338 (422)
+.++.+|||+|||+|..+..+++. ..+++++|+++.+++.+++++ .++.++..|....+.
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~~------------ 103 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQI------------ 103 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSCC------------
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCCC------------
Confidence 468899999999999999999987 369999999999999998875 358888888765321
Q ss_pred CCCCCCCCCceeecC
Q 014571 339 NSKDNNYITSQTSDS 353 (422)
Q Consensus 339 ~~~~~~~FD~VLvDa 353 (422)
..+.||.|++..
T Consensus 104 ---~~~~~D~i~~~~ 115 (195)
T 3cgg_A 104 ---SETDFDLIVSAG 115 (195)
T ss_dssp ---CCCCEEEEEECC
T ss_pred ---CCCceeEEEECC
Confidence 134689999853
No 232
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.96 E-value=7.6e-06 Score=75.70 Aligned_cols=72 Identities=18% Similarity=0.060 Sum_probs=59.0
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhhhhccCCCCCCccccC
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVRRKNESNDEPNMCN 339 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~~~~~~~~~~~~~~~~ 339 (422)
++.+|||++||+|..+..+++. ..+|+++|+++.+++.+++++...+. .++.++++|+.....
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~------------- 129 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP------------- 129 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC-------------
T ss_pred CCCCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC-------------
Confidence 3459999999999999988763 57899999999999999999887543 679999999876421
Q ss_pred CCCCCCCCceee
Q 014571 340 SKDNNYITSQTS 351 (422)
Q Consensus 340 ~~~~~~FD~VLv 351 (422)
...||.|++
T Consensus 130 ---~~~fD~v~~ 138 (235)
T 3lcc_A 130 ---TELFDLIFD 138 (235)
T ss_dssp ---SSCEEEEEE
T ss_pred ---CCCeeEEEE
Confidence 246898886
No 233
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=97.94 E-value=7.8e-05 Score=73.85 Aligned_cols=114 Identities=12% Similarity=0.081 Sum_probs=84.6
Q ss_pred HHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEEEecchhhhhhcc
Q 014571 250 SIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKAVRRK 328 (422)
Q Consensus 250 S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~~~~~~ 328 (422)
...+...++..++.+|||++||+|..+..+++.. +..+++++|+ +..++.+++++++.|+.+ ++++.+|....+.
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-- 254 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY-- 254 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC--
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC--
Confidence 3445566677889999999999999999999985 4579999999 999999999999999865 9999999865321
Q ss_pred CCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEeh
Q 014571 329 NESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 329 ~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
.. +|.|++. .. ...|.. +...++|+++.. ++.+|.+++.
T Consensus 255 --------------~~-~D~v~~~------~v----------lh~~~d---------~~~~~~l~~~~~~L~pgG~l~i~ 294 (359)
T 1x19_A 255 --------------PE-ADAVLFC------RI----------LYSANE---------QLSTIMCKKAFDAMRSGGRLLIL 294 (359)
T ss_dssp --------------CC-CSEEEEE------SC----------GGGSCH---------HHHHHHHHHHHTTCCTTCEEEEE
T ss_pred --------------CC-CCEEEEe------ch----------hccCCH---------HHHHHHHHHHHHhcCCCCEEEEE
Confidence 11 3888771 11 112322 234567777755 7999988763
No 234
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.94 E-value=1.5e-05 Score=71.82 Aligned_cols=67 Identities=15% Similarity=0.071 Sum_probs=56.5
Q ss_pred CCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCC
Q 014571 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSK 341 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~ 341 (422)
+.+|||+|||+|..+..+++. ..+|+++|+++.+++.++++ ..++.++++|+...+..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~-------------- 99 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQT-----HPSVTFHHGTITDLSDS-------------- 99 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHH-----CTTSEEECCCGGGGGGS--------------
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHh-----CCCCeEEeCcccccccC--------------
Confidence 889999999999999999987 35899999999999998886 35789999998875421
Q ss_pred CCCCCCceee
Q 014571 342 DNNYITSQTS 351 (422)
Q Consensus 342 ~~~~FD~VLv 351 (422)
.+.||.|++
T Consensus 100 -~~~fD~v~~ 108 (203)
T 3h2b_A 100 -PKRWAGLLA 108 (203)
T ss_dssp -CCCEEEEEE
T ss_pred -CCCeEEEEe
Confidence 356899987
No 235
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=97.94 E-value=1.1e-05 Score=70.51 Aligned_cols=58 Identities=10% Similarity=0.086 Sum_probs=50.9
Q ss_pred HhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecc
Q 014571 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLD 320 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~D 320 (422)
..+.+.++.+|||++||+|..+..+++.. .+|+++|+++.+++.++++ ..++++..+|
T Consensus 11 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d 68 (170)
T 3i9f_A 11 PNIFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK-----FDSVITLSDP 68 (170)
T ss_dssp HHHHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH-----CTTSEEESSG
T ss_pred HhcCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC
Confidence 34567889999999999999999999874 4999999999999999987 5679999888
No 236
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.91 E-value=1.5e-05 Score=73.54 Aligned_cols=72 Identities=17% Similarity=0.073 Sum_probs=59.0
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~ 338 (422)
+.++.+|||+|||+|..+..+++. ..+|+++|+++.+++.++++. ...++.++++|+...+.
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~------------ 112 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLPF------------ 112 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCSS------------
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCCC------------
Confidence 357889999999999999999987 468999999999999998864 34679999999876431
Q ss_pred CCCCCCCCCceee
Q 014571 339 NSKDNNYITSQTS 351 (422)
Q Consensus 339 ~~~~~~~FD~VLv 351 (422)
..+.||.|++
T Consensus 113 ---~~~~fD~v~~ 122 (242)
T 3l8d_A 113 ---ENEQFEAIMA 122 (242)
T ss_dssp ---CTTCEEEEEE
T ss_pred ---CCCCccEEEE
Confidence 1356899986
No 237
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.91 E-value=2.1e-05 Score=71.39 Aligned_cols=69 Identities=13% Similarity=0.068 Sum_probs=56.8
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccc
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNM 337 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~ 337 (422)
...++.+|||++||+|..+..+++. ..+|+++|+++.+++.+++++ ++.+..+|....+
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~------------ 98 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL------GRPVRTMLFHQLD------------ 98 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGCC------------
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc------CCceEEeeeccCC------------
Confidence 4567899999999999999999987 469999999999999999886 4567778876543
Q ss_pred cCCCCCCCCCceee
Q 014571 338 CNSKDNNYITSQTS 351 (422)
Q Consensus 338 ~~~~~~~~FD~VLv 351 (422)
..+.||.|++
T Consensus 99 ----~~~~fD~v~~ 108 (211)
T 3e23_A 99 ----AIDAYDAVWA 108 (211)
T ss_dssp ----CCSCEEEEEE
T ss_pred ----CCCcEEEEEe
Confidence 1356899987
No 238
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.91 E-value=1.7e-05 Score=80.96 Aligned_cols=108 Identities=13% Similarity=0.088 Sum_probs=76.1
Q ss_pred CCCeEEEecCC------CChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCC
Q 014571 261 KGERILDMCAA------PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDE 334 (422)
Q Consensus 261 pg~~VLD~CAg------pGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~ 334 (422)
++.+|||++|| +||-++.+++...+.++|+++|+++.+. ....+|+++++|+...+......
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~--- 283 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIA--- 283 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHH---
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhh---
Confidence 56899999999 8888999987655678999999999862 23468999999998754320000
Q ss_pred ccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEehhhHHHH
Q 014571 335 PNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLTALIESF 413 (422)
Q Consensus 335 ~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t~~~~~~ 413 (422)
...+.||.|++|. . . .| .-|...|+.+.. ||.+|++++.+...|+
T Consensus 284 ------~~d~sFDlVisdg----s-H------------~~-----------~d~~~aL~el~rvLKPGGvlVi~Dl~tsy 329 (419)
T 3sso_A 284 ------RRYGPFDIVIDDG----S-H------------IN-----------AHVRTSFAALFPHVRPGGLYVIEDMWTAY 329 (419)
T ss_dssp ------HHHCCEEEEEECS----C-C------------CH-----------HHHHHHHHHHGGGEEEEEEEEEECGGGGG
T ss_pred ------cccCCccEEEECC----c-c------------cc-----------hhHHHHHHHHHHhcCCCeEEEEEeccccc
Confidence 0025699998752 1 2 01 123345666655 8999999998877776
Q ss_pred H
Q 014571 414 L 414 (422)
Q Consensus 414 ~ 414 (422)
|
T Consensus 330 ~ 330 (419)
T 3sso_A 330 W 330 (419)
T ss_dssp C
T ss_pred C
Confidence 6
No 239
>2q07_A Uncharacterized protein AF0587; monomer, structural genomics, PSI-2, protein structure initiative; 2.04A {Archaeoglobus fulgidus dsm 4304} SCOP: b.122.1.1 c.18.1.4 d.17.6.5
Probab=97.89 E-value=6.7e-06 Score=81.00 Aligned_cols=68 Identities=22% Similarity=0.402 Sum_probs=57.9
Q ss_pred CCEEEEccccHHHHHcCCccccCceeeccCCccCCCEEEEeeccccccCCCCchhhhhhhcccCCCCCCCcccCCCceEE
Q 014571 123 PKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYI 202 (422)
Q Consensus 123 ~k~ViVd~~~~eaVlrGA~v~~PGil~~~~~~~~gd~V~v~~~l~~~~~~p~W~~~~~r~~~~~~~~~~~~~~~~~~v~V 202 (422)
.+.|+||+ +|+.| +||+|||+.++.++++||.|.| . .+..+
T Consensus 230 ~~~V~Vd~----~v~~G-~v~~pGv~~~~~~i~~gd~V~V-~---------------------------------~g~~v 270 (306)
T 2q07_A 230 IYTVEIGD----FEVKG-TIFAGGVLRADEKIRPNDVVVF-H---------------------------------NSRIF 270 (306)
T ss_dssp CSEEEECS----SCCCS-EEEGGGEEEECTTCCTTCEEEE-E---------------------------------CSSCE
T ss_pred CCEEEEcc----cccCC-ceeCCeeEeCCCCcCCCCEEEE-E---------------------------------CCEEE
Confidence 38999998 78899 9999999999999999999998 3 14578
Q ss_pred EEccCccCHHHHhcccCcceeeccccc
Q 014571 203 GQGTAMMSRAGIFRASEGIAVDMHNRI 229 (422)
Q Consensus 203 rvg~a~msreel~~~~~GiaV~~~~~~ 229 (422)
++|++.||.++|.+..+|++++....+
T Consensus 271 avG~a~ms~~em~~~~kG~aV~v~~~~ 297 (306)
T 2q07_A 271 GVGLAAMSGKEMAGSEKGIAINVKRKF 297 (306)
T ss_dssp EEEEESSCHHHHSCC--CEEEEEEEEE
T ss_pred EEEEEeeCHHHHhhcCCceEEEEEEEc
Confidence 999999999999999999999876443
No 240
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.88 E-value=2.1e-05 Score=82.98 Aligned_cols=110 Identities=18% Similarity=0.173 Sum_probs=83.9
Q ss_pred cceEEEeChhHHHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCC------------CcEEEEEcCChHHHHHHHHHHH
Q 014571 240 EGEIFLQNLPSIVTAHALDPQKGERILDMCAAPGGKTTAIASLLRD------------EGEVVAVDRSHNKVMDIQKLAA 307 (422)
Q Consensus 240 ~G~~~~Qd~~S~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~------------~g~V~A~D~s~~rl~~l~~~l~ 307 (422)
.|.||-=..-+.+.+.+++|++|++|+|-|||+||..+.+.+.+.. ...+++.|+++.....++-|+-
T Consensus 196 ~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~ 275 (530)
T 3ufb_A 196 SGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLL 275 (530)
T ss_dssp CCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHH
T ss_pred CceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHH
Confidence 4665544445567788999999999999999999998887765532 2469999999999999999998
Q ss_pred HhCCcceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCc
Q 014571 308 EMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEV 360 (422)
Q Consensus 308 r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~ 360 (422)
-.|...-.+..+|+...+.... .....||.|+..||-++...
T Consensus 276 lhg~~~~~I~~~dtL~~~~~~~-----------~~~~~fD~Il~NPPf~~~~~ 317 (530)
T 3ufb_A 276 LHGLEYPRIDPENSLRFPLREM-----------GDKDRVDVILTNPPFGGEEE 317 (530)
T ss_dssp HHTCSCCEEECSCTTCSCGGGC-----------CGGGCBSEEEECCCSSCBCC
T ss_pred hcCCccccccccccccCchhhh-----------cccccceEEEecCCCCcccc
Confidence 8888766777888764332111 11357999999999987644
No 241
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.86 E-value=1.7e-05 Score=75.84 Aligned_cols=92 Identities=12% Similarity=0.079 Sum_probs=66.3
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCC
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNES 331 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~ 331 (422)
..+..+++++|++|||+|||+|..|. ++. ...++|+|+|+++.+++.++++++.. .+++++++|+.+.+......
T Consensus 12 ~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~--~~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~~~~~~~ 86 (252)
T 1qyr_A 12 SIVSAINPQKGQAMVEIGPGLAALTE-PVG--ERLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFNFGELAE 86 (252)
T ss_dssp HHHHHHCCCTTCCEEEECCTTTTTHH-HHH--TTCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCCHHHHHH
T ss_pred HHHHhcCCCCcCEEEEECCCCcHHHH-hhh--CCCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCCHHHhhc
Confidence 45566788999999999999999999 654 22334999999999999999887543 58999999998764321000
Q ss_pred CCCccccCCCCCCCCCceeecCCcccc
Q 014571 332 NDEPNMCNSKDNNYITSQTSDSMKLHK 358 (422)
Q Consensus 332 ~~~~~~~~~~~~~~FD~VLvDaPCSg~ 358 (422)
..+..|.|+...|-.-+
T Consensus 87 ----------~~~~~~~vvsNlPY~i~ 103 (252)
T 1qyr_A 87 ----------KMGQPLRVFGNLPYNIS 103 (252)
T ss_dssp ----------HHTSCEEEEEECCTTTH
T ss_pred ----------ccCCceEEEECCCCCcc
Confidence 00124677777776543
No 242
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=97.85 E-value=1.6e-05 Score=73.01 Aligned_cols=59 Identities=15% Similarity=0.157 Sum_probs=50.1
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
..++.+|||++||+|..+..+++.. .+|+++|+++.+++.+++++.. ++.++++|+...
T Consensus 40 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~ 98 (250)
T 2p7i_A 40 FFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD----GITYIHSRFEDA 98 (250)
T ss_dssp GCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGC
T ss_pred hcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHc
Confidence 3578899999999999999998863 3799999999999999887543 789999998764
No 243
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.85 E-value=1.5e-05 Score=78.88 Aligned_cols=80 Identities=9% Similarity=-0.092 Sum_probs=64.4
Q ss_pred CeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCCC
Q 014571 263 ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKD 342 (422)
Q Consensus 263 ~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~ 342 (422)
.+|||++||.|+.+..+++... ..+|+++|+++..++.+++++...+-.+++++.+|++.+.... .
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~-------------~ 156 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESF-------------T 156 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTC-------------C
T ss_pred CEEEEEECCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhc-------------c
Confidence 4999999999999999998653 4699999999999999999865443467999999999875321 1
Q ss_pred CCCCCceeecCCcc
Q 014571 343 NNYITSQTSDSMKL 356 (422)
Q Consensus 343 ~~~FD~VLvDaPCS 356 (422)
.+.||.|++|++..
T Consensus 157 ~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 157 PASRDVIIRDVFAG 170 (317)
T ss_dssp TTCEEEEEECCSTT
T ss_pred CCCCCEEEECCCCc
Confidence 35699999997543
No 244
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=97.84 E-value=3.8e-05 Score=75.16 Aligned_cols=106 Identities=10% Similarity=0.043 Sum_probs=79.7
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhhhhccCCCCCCcc
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVRRKNESNDEPN 336 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~~~~~~~~~~~~~ 336 (422)
+..++.+|||++||+|..+..+++.. +..+++++|+ +..++.+++++...|+ .+|++..+|.....
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------- 232 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPL----------- 232 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----------
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCC-----------
Confidence 44567899999999999999999876 4578999999 9999999999999987 57999999975210
Q ss_pred ccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEeh
Q 014571 337 MCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 337 ~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
+..||.|++ +. . ...|.. +.+.++|+++.. |+.+|.++++
T Consensus 233 ------p~~~D~v~~----~~--v----------lh~~~~---------~~~~~~l~~~~~~L~pgG~l~i~ 273 (332)
T 3i53_A 233 ------PAGAGGYVL----SA--V----------LHDWDD---------LSAVAILRRCAEAAGSGGVVLVI 273 (332)
T ss_dssp ------CCSCSEEEE----ES--C----------GGGSCH---------HHHHHHHHHHHHHHTTTCEEEEE
T ss_pred ------CCCCcEEEE----eh--h----------hccCCH---------HHHHHHHHHHHHhcCCCCEEEEE
Confidence 125898886 11 1 112332 135677877755 7999999884
No 245
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=97.83 E-value=0.00013 Score=72.72 Aligned_cols=110 Identities=13% Similarity=0.091 Sum_probs=83.1
Q ss_pred HHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhhhhccCCC
Q 014571 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKAVRRKNES 331 (422)
Q Consensus 253 v~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~~~~~~~~ 331 (422)
+...++..++.+|||++||+|..+..+++.. +..+++++|+ +..++.+++++...|+ .+|++..+|.....
T Consensus 194 l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~------ 265 (369)
T 3gwz_A 194 VAAAYDFSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETI------ 265 (369)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCC------
T ss_pred HHHhCCCccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCC------
Confidence 3445567788999999999999999999985 4579999999 9999999999999987 56999999976210
Q ss_pred CCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEe
Q 014571 332 NDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVL 406 (422)
Q Consensus 332 ~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~ 406 (422)
+..||.|++- .. ...|.. +.+.++|+++.. ++.+|.+++
T Consensus 266 -----------p~~~D~v~~~------~v----------lh~~~d---------~~~~~~L~~~~~~L~pgG~l~i 305 (369)
T 3gwz_A 266 -----------PDGADVYLIK------HV----------LHDWDD---------DDVVRILRRIATAMKPDSRLLV 305 (369)
T ss_dssp -----------CSSCSEEEEE------SC----------GGGSCH---------HHHHHHHHHHHTTCCTTCEEEE
T ss_pred -----------CCCceEEEhh------hh----------hccCCH---------HHHHHHHHHHHHHcCCCCEEEE
Confidence 1258988761 11 112322 134578888855 899999888
No 246
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=97.82 E-value=2.2e-05 Score=73.88 Aligned_cols=101 Identities=12% Similarity=0.028 Sum_probs=72.1
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccC
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCN 339 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~ 339 (422)
.++.+|||+|||+|..+..+++. ..+|+++|+++.+++.+++++. ++.++++|+...+.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~~~~~------------- 107 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP-----DAVLHHGDMRDFSL------------- 107 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTCCC-------------
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC-----CCEEEECChHHCCc-------------
Confidence 46789999999999999999887 3589999999999999988743 68899999876421
Q ss_pred CCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEeh
Q 014571 340 SKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVLT 407 (422)
Q Consensus 340 ~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~t 407 (422)
.+.||.|++.. +.+. +.+. .....++|+++.. |+.+|.++++
T Consensus 108 ---~~~fD~v~~~~-----~~l~-----------~~~~-------~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 108 ---GRRFSAVTCMF-----SSIG-----------HLAG-------QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp ---SCCEEEEEECT-----TGGG-----------GSCH-------HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred ---cCCcCEEEEcC-----chhh-----------hcCC-------HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 35689998621 1211 1110 1123455665644 7899999885
No 247
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=97.81 E-value=6.7e-05 Score=74.34 Aligned_cols=70 Identities=24% Similarity=0.190 Sum_probs=61.0
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhh
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~ 323 (422)
.+...++..++.+|||+|||+|..+..+++.. +..+++++|+ +..++.+++++...|+. +|+++.+|...
T Consensus 173 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 243 (374)
T 1qzz_A 173 APADAYDWSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK 243 (374)
T ss_dssp HHHHTSCCTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred HHHHhCCCCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC
Confidence 34556677889999999999999999999986 4579999999 99999999999999985 79999999754
No 248
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=97.80 E-value=5.2e-05 Score=73.81 Aligned_cols=69 Identities=20% Similarity=0.179 Sum_probs=59.6
Q ss_pred HHHhcCC--CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhh
Q 014571 253 TAHALDP--QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (422)
Q Consensus 253 v~~~L~p--~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~ 323 (422)
+...++. .++.+|||+|||+|..+..+++.. +..+++++|++ ..++.+++++.+.|+. +++++.+|..+
T Consensus 155 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 226 (335)
T 2r3s_A 155 IAQLVNENKIEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFE 226 (335)
T ss_dssp HHHHHTC--CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTT
T ss_pred HHHhcccccCCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEeccccc
Confidence 3344566 788999999999999999999986 45799999999 9999999999999985 59999999865
No 249
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=97.79 E-value=3.1e-05 Score=70.13 Aligned_cols=80 Identities=18% Similarity=0.054 Sum_probs=60.1
Q ss_pred HHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCC
Q 014571 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESN 332 (422)
Q Consensus 253 v~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~ 332 (422)
....+...++.+|||++||+|..+..+++. ..+|+++|+++.+++.++++ .++.+...|.........
T Consensus 44 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~--- 111 (227)
T 3e8s_A 44 ILLAILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKV--- 111 (227)
T ss_dssp HHHHHHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCS---
T ss_pred HHHHhhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhccccc---
Confidence 344445567799999999999999999987 46899999999999999886 456788888876532110
Q ss_pred CCccccCCCCCCCCCceeec
Q 014571 333 DEPNMCNSKDNNYITSQTSD 352 (422)
Q Consensus 333 ~~~~~~~~~~~~~FD~VLvD 352 (422)
.....||.|++.
T Consensus 112 --------~~~~~fD~v~~~ 123 (227)
T 3e8s_A 112 --------PVGKDYDLICAN 123 (227)
T ss_dssp --------CCCCCEEEEEEE
T ss_pred --------ccCCCccEEEEC
Confidence 113458999873
No 250
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=97.78 E-value=3.6e-05 Score=72.56 Aligned_cols=71 Identities=18% Similarity=0.127 Sum_probs=57.2
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccC
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCN 339 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~ 339 (422)
.++.+|||++||+|..+..+++.++ .++|+++|+++.+++.++++. .++.+..+|+...+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~------------- 144 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLPF------------- 144 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCSB-------------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCCC-------------
Confidence 6889999999999999999999863 469999999999999888763 467888888765421
Q ss_pred CCCCCCCCceee
Q 014571 340 SKDNNYITSQTS 351 (422)
Q Consensus 340 ~~~~~~FD~VLv 351 (422)
..+.||.|++
T Consensus 145 --~~~~fD~v~~ 154 (269)
T 1p91_A 145 --SDTSMDAIIR 154 (269)
T ss_dssp --CTTCEEEEEE
T ss_pred --CCCceeEEEE
Confidence 1246898885
No 251
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=97.78 E-value=2.8e-05 Score=72.22 Aligned_cols=69 Identities=16% Similarity=0.162 Sum_probs=56.0
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~ 338 (422)
.+++.+|||++||+|..+..+++. ..+|+++|+|+.+++.++++ +.++.+|........
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~~---------- 97 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKSL---------- 97 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHTS----------
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhhhc----------
Confidence 568899999999999999999887 35799999999999988876 778888987753211
Q ss_pred CCCCCCCCCceee
Q 014571 339 NSKDNNYITSQTS 351 (422)
Q Consensus 339 ~~~~~~~FD~VLv 351 (422)
..+.||.|++
T Consensus 98 ---~~~~fD~i~~ 107 (240)
T 3dli_A 98 ---PDKYLDGVMI 107 (240)
T ss_dssp ---CTTCBSEEEE
T ss_pred ---CCCCeeEEEE
Confidence 1356899987
No 252
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=97.77 E-value=4.3e-05 Score=77.34 Aligned_cols=62 Identities=19% Similarity=0.156 Sum_probs=52.7
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEEEecchhhh
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKA 324 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~~ 324 (422)
.+|.+|||++||+|-.+..+|+. +..+|+|+|.++ +++.++++++..|+.+ |+++.+|++.+
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~a--GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~ 144 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQA--GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETV 144 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTC
T ss_pred cCCCEEEEeCCCccHHHHHHHHh--CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeee
Confidence 37899999999999988777765 245899999995 8999999999999854 99999998764
No 253
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.77 E-value=1.9e-05 Score=79.65 Aligned_cols=78 Identities=21% Similarity=0.191 Sum_probs=59.8
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcccc
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~ 338 (422)
+++|++|||+||+|||.|..+++. .++|+|+|+.+ +...+. ..++|++++.|+.....
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~-----l~~~l~--~~~~V~~~~~d~~~~~~------------ 266 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGP-----MAQSLM--DTGQVTWLREDGFKFRP------------ 266 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSC-----CCHHHH--TTTCEEEECSCTTTCCC------------
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhh-----cChhhc--cCCCeEEEeCccccccC------------
Confidence 679999999999999999999887 58999999763 112222 24679999999876431
Q ss_pred CCCCCCCCCceeecCCccccCch
Q 014571 339 NSKDNNYITSQTSDSMKLHKEVP 361 (422)
Q Consensus 339 ~~~~~~~FD~VLvDaPCSg~G~l 361 (422)
....||.|++|--|.-++.+
T Consensus 267 ---~~~~~D~vvsDm~~~p~~~~ 286 (375)
T 4auk_A 267 ---TRSNISWMVCDMVEKPAKVA 286 (375)
T ss_dssp ---CSSCEEEEEECCSSCHHHHH
T ss_pred ---CCCCcCEEEEcCCCChHHhH
Confidence 12468999999988877764
No 254
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.77 E-value=4.4e-05 Score=73.05 Aligned_cols=46 Identities=9% Similarity=0.151 Sum_probs=36.1
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHH
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAA 307 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~ 307 (422)
.+|.+|||+|||+|. +..++... ...+|+|+|+|+.+++.++++++
T Consensus 70 ~~~~~vLDiGcG~G~-~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 70 VSGRTLIDIGSGPTV-YQLLSACS-HFEDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp SCCSEEEEETCTTCC-GGGTTGGG-GCSEEEEECSCHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcCh-HHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHh
Confidence 378999999999999 44333332 23599999999999999988664
No 255
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.76 E-value=4.1e-05 Score=75.18 Aligned_cols=71 Identities=23% Similarity=0.434 Sum_probs=58.8
Q ss_pred cccCHHHHHHHHHHhchhhHHHHHHHhcCCCCccEEEeecCCCCHHHHHHHHHHHHHhcCCCCcccccccccccCCCccc
Q 014571 13 LRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTIS 92 (422)
Q Consensus 13 ~~~~~~v~~~l~~~~~~~~~~~~~~~l~~pp~~~~~Rvnt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (422)
.++++.+.+.+.+.|| +.++++++++..||. .++||||+|++++++++.|.+. | +.
T Consensus 14 ~~~P~w~~~~~~~~~g-~~~~~~~~~~~~~~p-~~~RvN~~k~~~~~~~~~L~~~---------g-------------~~ 69 (315)
T 1ixk_A 14 LGYSKLFADRYFQLWG-ERAIRIAEAMEKPLP-RCFRVNTLKISVQDLVKRLNKK---------G-------------FQ 69 (315)
T ss_dssp TTCCHHHHHHHHHHHT-THHHHHHHHTTSCCC-CEEEECTTTSCHHHHHHHHHHT---------T-------------CE
T ss_pred hCCcHHHHHHHHHHcc-HHHHHHHHHcCCCCC-eEEEEeCCCCCHHHHHHHHHhC---------C-------------Ce
Confidence 4578899999999999 779999999999877 5699999999999999988754 3 34
Q ss_pred cccCCCCCcEEEEeC
Q 014571 93 ESQIPGLEYVVFVKG 107 (422)
Q Consensus 93 ~~~~~~l~~~l~~~~ 107 (422)
..+.|+.++.++++.
T Consensus 70 ~~~~~~~~~~~~~~~ 84 (315)
T 1ixk_A 70 FKRVPWAKEGFCLTR 84 (315)
T ss_dssp EEEETTEEEEEEEEE
T ss_pred eeECCCCCceEEEeC
Confidence 456778888888753
No 256
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.73 E-value=7.1e-05 Score=72.44 Aligned_cols=114 Identities=18% Similarity=0.121 Sum_probs=75.5
Q ss_pred CCCeEEEecCCCCh----hHHHHHhccCC---CcEEEEEcCChHHHHHHHHHH--------------HHh---------C
Q 014571 261 KGERILDMCAAPGG----KTTAIASLLRD---EGEVVAVDRSHNKVMDIQKLA--------------AEM---------G 310 (422)
Q Consensus 261 pg~~VLD~CAgpGg----KT~~la~l~~~---~g~V~A~D~s~~rl~~l~~~l--------------~r~---------g 310 (422)
++.+|||+|||+|- .+..+++.++. ..+|+|+|+|+.+++.+++++ +++ |
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 45555665442 359999999999999999874 111 1
Q ss_pred ---C-----cceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccc
Q 014571 311 ---L-----KCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCG 382 (422)
Q Consensus 311 ---~-----~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~ 382 (422)
+ .+|.+.++|....+. + ..+.||.|+| .. . ...+.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~-----~---------~~~~fDlI~c----rn--v----------liyf~------- 227 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQY-----N---------VPGPFDAIFC----RN--V----------MIYFD------- 227 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSC-----C---------CCCCEEEEEE----CS--S----------GGGSC-------
T ss_pred ceeechhhcccCeEEecccCCCCC-----C---------cCCCeeEEEE----CC--c----------hHhCC-------
Confidence 0 257888888654211 0 1246999998 00 1 00111
Q ss_pred hhHHHHHHHHHHhcc-ceeccEEEehhhHHHHH
Q 014571 383 ECGMAQEEINALVVG-LRIQKVLVLTALIESFL 414 (422)
Q Consensus 383 ~l~~~Q~~IL~~a~~-lr~~~~~~~t~~~~~~~ 414 (422)
.+.|+++++.+.. |+.+|.|++ .|.|++.
T Consensus 228 --~~~~~~vl~~~~~~L~pgG~L~l-g~sE~~~ 257 (274)
T 1af7_A 228 --KTTQEDILRRFVPLLKPDGLLFA-GHSENFS 257 (274)
T ss_dssp --HHHHHHHHHHHGGGEEEEEEEEE-CTTCCCT
T ss_pred --HHHHHHHHHHHHHHhCCCcEEEE-Eeccccc
Confidence 1358899988865 899999987 4556553
No 257
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=97.71 E-value=9.7e-05 Score=72.89 Aligned_cols=70 Identities=20% Similarity=0.207 Sum_probs=60.6
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhh
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALK 323 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~ 323 (422)
.+...++..++.+|||+|||+|..+..+++.. +..+++++|+ +..++.++++++..|+. +++++.+|...
T Consensus 174 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 244 (360)
T 1tw3_A 174 APAAAYDWTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE 244 (360)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred HHHHhCCCccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC
Confidence 34556677889999999999999999999885 4579999999 99999999999999885 79999999753
No 258
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=97.71 E-value=2e-05 Score=75.46 Aligned_cols=67 Identities=15% Similarity=0.079 Sum_probs=54.0
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCC
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNS 340 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~ 340 (422)
.+.+|||++||+|..|..+++. ..+|+|+|+|+.+++.+++ ..+|.+.++|+...+.
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~------~~~v~~~~~~~e~~~~-------------- 95 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR------HPRVTYAVAPAEDTGL-------------- 95 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC------CTTEEEEECCTTCCCC--------------
T ss_pred CCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh------cCCceeehhhhhhhcc--------------
Confidence 4579999999999999999987 3689999999999877653 3679999999876432
Q ss_pred CCCCCCCceee
Q 014571 341 KDNNYITSQTS 351 (422)
Q Consensus 341 ~~~~~FD~VLv 351 (422)
..+.||.|++
T Consensus 96 -~~~sfD~v~~ 105 (257)
T 4hg2_A 96 -PPASVDVAIA 105 (257)
T ss_dssp -CSSCEEEEEE
T ss_pred -cCCcccEEEE
Confidence 1356999986
No 259
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.71 E-value=0.00011 Score=70.12 Aligned_cols=59 Identities=19% Similarity=0.032 Sum_probs=51.2
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhh
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~ 323 (422)
.++.+|||++||.|-.+..++ +..+++|+|+++.+++.+++++.+.| .+..+...|...
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g-~~~~~~v~D~~~ 162 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKD-WDFTFALQDVLC 162 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTT-CEEEEEECCTTT
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcC-CCceEEEeeccc
Confidence 567899999999998877666 57899999999999999999999998 567888888754
No 260
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=97.70 E-value=4.9e-05 Score=68.77 Aligned_cols=66 Identities=15% Similarity=-0.002 Sum_probs=52.7
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCC
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNS 340 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~ 340 (422)
++.+|||++||+|..+..+ +..+|+++|+++.+++.+++++ .++.++++|....+.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~-------------- 91 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALPF-------------- 91 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCCS--------------
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCCC--------------
Confidence 8899999999999988766 2238999999999999998875 568888888765421
Q ss_pred CCCCCCCceee
Q 014571 341 KDNNYITSQTS 351 (422)
Q Consensus 341 ~~~~~FD~VLv 351 (422)
..+.||.|++
T Consensus 92 -~~~~fD~v~~ 101 (211)
T 2gs9_A 92 -PGESFDVVLL 101 (211)
T ss_dssp -CSSCEEEEEE
T ss_pred -CCCcEEEEEE
Confidence 1356899986
No 261
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=97.70 E-value=9e-05 Score=68.71 Aligned_cols=64 Identities=19% Similarity=0.188 Sum_probs=54.4
Q ss_pred cCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhh
Q 014571 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR 326 (422)
Q Consensus 257 L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~ 326 (422)
..+.++.+|||++||+|..+..+++... +|+++|+++.+++.+++++ ...++.++++|......
T Consensus 52 ~~~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~ 115 (245)
T 3ggd_A 52 LLFNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQ 115 (245)
T ss_dssp TTSCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHH
T ss_pred hccCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhC---cccCceEEECccccccc
Confidence 3467899999999999999999998742 8999999999999999876 34579999999887543
No 262
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=97.70 E-value=4.7e-05 Score=73.17 Aligned_cols=65 Identities=17% Similarity=0.193 Sum_probs=48.2
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccC---CCcEE--EEEcCChHHHHHHHHHHHHh-CCcceEEE--ecchhh
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLR---DEGEV--VAVDRSHNKVMDIQKLAAEM-GLKCITTY--KLDALK 323 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~---~~g~V--~A~D~s~~rl~~l~~~l~r~-g~~nv~~~--~~Da~~ 323 (422)
+.++.+|||++||+|..|..++..+. +...| +++|.|+.+++.++++++.. ++.++.+. ..|+..
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~ 122 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSE 122 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhh
Confidence 46788999999999988776554321 34544 99999999999999998764 66776554 445543
No 263
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.68 E-value=3.2e-05 Score=77.82 Aligned_cols=82 Identities=18% Similarity=0.234 Sum_probs=64.6
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhC---Cc-----ceEEEecchhhhhhccCCCC
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMG---LK-----CITTYKLDALKAVRRKNESN 332 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g---~~-----nv~~~~~Da~~~~~~~~~~~ 332 (422)
.+.+|||+++|.|+-+..+++.- ..+|+++|+++..++.+++++..++ +. +++++.+|++.+.....
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~--- 262 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYA--- 262 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHH---
T ss_pred CCCEEEEEECChhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhh---
Confidence 56899999999999999888763 3799999999999999999976432 22 69999999998764310
Q ss_pred CCccccCCCCCCCCCceeecCCc
Q 014571 333 DEPNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 333 ~~~~~~~~~~~~~FD~VLvDaPC 355 (422)
...+.||.|++|+|-
T Consensus 263 --------~~~~~fDvII~D~~d 277 (364)
T 2qfm_A 263 --------KEGREFDYVINDLTA 277 (364)
T ss_dssp --------HHTCCEEEEEEECCS
T ss_pred --------ccCCCceEEEECCCC
Confidence 013569999999975
No 264
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=97.65 E-value=0.00037 Score=66.91 Aligned_cols=62 Identities=16% Similarity=0.123 Sum_probs=49.5
Q ss_pred CCCCeEEEecCCC---ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 260 QKGERILDMCAAP---GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 260 ~pg~~VLD~CAgp---GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.+..+|||++||+ |..+..+++. .+.++|+++|.|+.+++.+++++.. ..++.++.+|.+..
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~-~p~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~~~~ 140 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSV-NPDARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADVRDP 140 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCTTCH
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHh-CCCCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeCCCc
Confidence 3457999999999 9765544444 4568999999999999999998743 35799999998764
No 265
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.57 E-value=0.00014 Score=68.52 Aligned_cols=67 Identities=18% Similarity=0.094 Sum_probs=53.1
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCC
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNS 340 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~ 340 (422)
++.+|||++||+|..+..+++. ..+|+++|+++.+++.++++.. .+ ++++|+...+.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~~~-------------- 110 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV----KN--VVEAKAEDLPF-------------- 110 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC----SC--EEECCTTSCCS--------------
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC----CC--EEECcHHHCCC--------------
Confidence 7889999999999999999886 3689999999999999988754 22 67777765321
Q ss_pred CCCCCCCceee
Q 014571 341 KDNNYITSQTS 351 (422)
Q Consensus 341 ~~~~~FD~VLv 351 (422)
..+.||.|++
T Consensus 111 -~~~~fD~v~~ 120 (260)
T 2avn_A 111 -PSGAFEAVLA 120 (260)
T ss_dssp -CTTCEEEEEE
T ss_pred -CCCCEEEEEE
Confidence 1356899886
No 266
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=97.56 E-value=4.4e-05 Score=72.39 Aligned_cols=49 Identities=12% Similarity=0.174 Sum_probs=40.3
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHH
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAE 308 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r 308 (422)
.+.+|.+|||++||+|..+..++.. +..+|+|+|+|+.+++.++++++.
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~ 100 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKK 100 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhc
Confidence 4678999999999999877766554 224799999999999999988754
No 267
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.55 E-value=1.8e-05 Score=75.98 Aligned_cols=75 Identities=13% Similarity=0.109 Sum_probs=51.6
Q ss_pred CCCCCeEEEecCCCChhHHHHHhc--cCC-CcEEEEEcC--ChHHHHHHHHHHHHhCCcceEEEec-chhhhhhccCCCC
Q 014571 259 PQKGERILDMCAAPGGKTTAIASL--LRD-EGEVVAVDR--SHNKVMDIQKLAAEMGLKCITTYKL-DALKAVRRKNESN 332 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l--~~~-~g~V~A~D~--s~~rl~~l~~~l~r~g~~nv~~~~~-Da~~~~~~~~~~~ 332 (422)
.+||.+|+|++|||||-|...+++ ++. .|.|+|+|. .+-.. ...|..-+.+.++ |.+...
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~-------~~~Gv~~i~~~~G~Df~~~~------- 136 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM-------QSYGWNIVTMKSGVDVFYKP------- 136 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC-------CSTTGGGEEEECSCCGGGSC-------
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc-------cCCCceEEEeeccCCccCCC-------
Confidence 578999999999999999999887 533 578888883 21100 0034444566667 887521
Q ss_pred CCccccCCCCCCCCCceeecC-Cccc
Q 014571 333 DEPNMCNSKDNNYITSQTSDS-MKLH 357 (422)
Q Consensus 333 ~~~~~~~~~~~~~FD~VLvDa-PCSg 357 (422)
...+|.||+|. |.||
T Consensus 137 ----------~~~~DvVLSDMAPnSG 152 (269)
T 2px2_A 137 ----------SEISDTLLCDIGESSP 152 (269)
T ss_dssp ----------CCCCSEEEECCCCCCS
T ss_pred ----------CCCCCEEEeCCCCCCC
Confidence 23589999996 7433
No 268
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.50 E-value=0.00012 Score=66.29 Aligned_cols=58 Identities=12% Similarity=0.098 Sum_probs=47.3
Q ss_pred HhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhh
Q 014571 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~ 323 (422)
..+. .++.+|||++||+|..+..+++. + .+++++|+++..++.++++. ..+..+|...
T Consensus 27 ~~~~-~~~~~vLdiG~G~G~~~~~l~~~--~-~~~~~~D~~~~~~~~~~~~~-------~~~~~~d~~~ 84 (230)
T 3cc8_A 27 KHIK-KEWKEVLDIGCSSGALGAAIKEN--G-TRVSGIEAFPEAAEQAKEKL-------DHVVLGDIET 84 (230)
T ss_dssp TTCC-TTCSEEEEETCTTSHHHHHHHTT--T-CEEEEEESSHHHHHHHHTTS-------SEEEESCTTT
T ss_pred HHhc-cCCCcEEEeCCCCCHHHHHHHhc--C-CeEEEEeCCHHHHHHHHHhC-------CcEEEcchhh
Confidence 3444 78899999999999999999987 3 79999999999998888653 2567777764
No 269
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=97.49 E-value=0.00011 Score=70.49 Aligned_cols=72 Identities=8% Similarity=-0.114 Sum_probs=59.2
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHH----hCCcceEEEecchhhhhhccCCCCCCcc
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAE----MGLKCITTYKLDALKAVRRKNESNDEPN 336 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r----~g~~nv~~~~~Da~~~~~~~~~~~~~~~ 336 (422)
.+.+|||++||.|+-+..++.. + ++|+++|+++..++.+++++.. +.-++++++.+|+..+.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----------- 137 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----------- 137 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-----------
T ss_pred CCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-----------
Confidence 4579999999999999999887 4 7999999999999999887643 22357999999987542
Q ss_pred ccCCCCCCCCCceeecC
Q 014571 337 MCNSKDNNYITSQTSDS 353 (422)
Q Consensus 337 ~~~~~~~~~FD~VLvDa 353 (422)
+.||.|++|+
T Consensus 138 -------~~fD~Ii~d~ 147 (262)
T 2cmg_A 138 -------KKYDLIFCLQ 147 (262)
T ss_dssp -------CCEEEEEESS
T ss_pred -------hhCCEEEECC
Confidence 3589999995
No 270
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.46 E-value=0.00014 Score=70.27 Aligned_cols=74 Identities=12% Similarity=0.035 Sum_probs=60.4
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccC
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCN 339 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~ 339 (422)
.+..+|||++||.|-.+..++... +..+++|+|+++.+++.+++|+.++|+. ..+...|.....
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~~~~~-------------- 194 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNVP-HRTNVADLLEDR-------------- 194 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTCC-EEEEECCTTTSC--------------
T ss_pred CCCceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeeecccC--------------
Confidence 346699999999999998888763 5789999999999999999999999987 677777754321
Q ss_pred CCCCCCCCceee
Q 014571 340 SKDNNYITSQTS 351 (422)
Q Consensus 340 ~~~~~~FD~VLv 351 (422)
..+.||.||+
T Consensus 195 --p~~~~DvaL~ 204 (281)
T 3lcv_B 195 --LDEPADVTLL 204 (281)
T ss_dssp --CCSCCSEEEE
T ss_pred --CCCCcchHHH
Confidence 2456898876
No 271
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=97.46 E-value=0.00027 Score=69.48 Aligned_cols=112 Identities=10% Similarity=0.054 Sum_probs=81.6
Q ss_pred HHhcCCCC-CCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhhhhhccCCC
Q 014571 254 AHALDPQK-GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKAVRRKNES 331 (422)
Q Consensus 254 ~~~L~p~p-g~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~~~~~~~~~ 331 (422)
...++..+ +.+|||++||+|..+..+++... ..+++++|+ +..++.+++++.+.++. +++++.+|.......
T Consensus 171 l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---- 244 (352)
T 3mcz_A 171 VSELGVFARARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNF---- 244 (352)
T ss_dssp HHTCGGGTTCCEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGG----
T ss_pred HHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCccc----
Confidence 34455556 88999999999999999998854 579999999 88999999999999885 599999998754310
Q ss_pred CCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEe
Q 014571 332 NDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVL 406 (422)
Q Consensus 332 ~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~ 406 (422)
....||.|++ + .. .+.|... ...++|+++.. ++.+|.+++
T Consensus 245 ----------~~~~~D~v~~----~--~v----------lh~~~~~---------~~~~~l~~~~~~L~pgG~l~i 285 (352)
T 3mcz_A 245 ----------EGGAADVVML----N--DC----------LHYFDAR---------EAREVIGHAAGLVKPGGALLI 285 (352)
T ss_dssp ----------TTCCEEEEEE----E--SC----------GGGSCHH---------HHHHHHHHHHHTEEEEEEEEE
T ss_pred ----------CCCCccEEEE----e--cc----------cccCCHH---------HHHHHHHHHHHHcCCCCEEEE
Confidence 1234898887 1 11 1123221 23567777754 788888877
No 272
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=97.44 E-value=7.2e-05 Score=69.76 Aligned_cols=50 Identities=20% Similarity=0.235 Sum_probs=42.0
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM 309 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~ 309 (422)
...+|.+|||++||+|..+..++... ..+|+++|+++.+++.++++++..
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~ 102 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACES--FTEIIVSDYTDQNLWELQKWLKKE 102 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHTTC
T ss_pred cccCCCEEEEECCCccHHHHHHhhcc--cCeEEEecCCHHHHHHHHHHHhcC
Confidence 34678999999999999988887652 258999999999999999887654
No 273
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=97.41 E-value=0.00023 Score=69.49 Aligned_cols=67 Identities=18% Similarity=0.148 Sum_probs=56.7
Q ss_pred HHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhh
Q 014571 254 AHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALK 323 (422)
Q Consensus 254 ~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~ 323 (422)
...++..+ .+|||+|||+|..+..+++.. +..+++++|+ +..++.+++++.+.|+ .+|+++.+|...
T Consensus 161 ~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 228 (334)
T 2ip2_A 161 PRLLDFRG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ 228 (334)
T ss_dssp HHHSCCTT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT
T ss_pred HHhCCCCC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC
Confidence 34445556 899999999999999999886 4579999999 9999999999988876 569999998764
No 274
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.37 E-value=0.00079 Score=62.38 Aligned_cols=60 Identities=20% Similarity=0.158 Sum_probs=50.5
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC---cceEEEecchhh
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL---KCITTYKLDALK 323 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~---~nv~~~~~Da~~ 323 (422)
++..+||++++ |.-|+.+|++ . .|+|+++|.++...+.+++++++.|+ ++|+++.+|+..
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~ 91 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGP 91 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSS
T ss_pred hCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchh
Confidence 46789999997 6666667764 3 68999999999999999999999995 579999999754
No 275
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.33 E-value=0.00015 Score=70.40 Aligned_cols=65 Identities=22% Similarity=0.106 Sum_probs=54.9
Q ss_pred CCCeEEEecCCC--ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhh
Q 014571 261 KGERILDMCAAP--GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325 (422)
Q Consensus 261 pg~~VLD~CAgp--GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 325 (422)
...+|||++||+ ++.+..+++...+.++|+++|.|+.+++.+++++...+..++.++++|.+.+.
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~ 144 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPA 144 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHH
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChh
Confidence 347899999997 67788888877778999999999999999999876554457999999998763
No 276
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.30 E-value=0.00019 Score=78.75 Aligned_cols=85 Identities=12% Similarity=-0.035 Sum_probs=61.7
Q ss_pred CCCCeEEEecCCCChhHHHHHhccC--CCcEEEEEcCChHHHHHH--HHHHHH----hCCcceEEEecchhhhhhccCCC
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLR--DEGEVVAVDRSHNKVMDI--QKLAAE----MGLKCITTYKLDALKAVRRKNES 331 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~--~~g~V~A~D~s~~rl~~l--~~~l~r----~g~~nv~~~~~Da~~~~~~~~~~ 331 (422)
.++.+|||.|||+|+....+++.++ +...++|+|+++..++.+ +.++.. .|..+..+...|......
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~----- 394 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNP----- 394 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCG-----
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccc-----
Confidence 4689999999999999999998764 246899999999999888 555443 344444555555543210
Q ss_pred CCCccccCCCCCCCCCceeecCCcccc
Q 014571 332 NDEPNMCNSKDNNYITSQTSDSMKLHK 358 (422)
Q Consensus 332 ~~~~~~~~~~~~~~FD~VLvDaPCSg~ 358 (422)
.....||.|+.+||-.+.
T Consensus 395 ---------~~~~kFDVVIgNPPYg~~ 412 (878)
T 3s1s_A 395 ---------EDFANVSVVVMNPPYVSG 412 (878)
T ss_dssp ---------GGGTTEEEEEECCBCCSS
T ss_pred ---------cccCCCCEEEECCCcccc
Confidence 113569999999999764
No 277
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=97.27 E-value=0.00055 Score=68.06 Aligned_cols=62 Identities=23% Similarity=0.214 Sum_probs=54.7
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhh
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALK 323 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~ 323 (422)
..+.+|||++||+|..+..+++.. +..+++++|+ +..++.++++++..|+ .+|+++.+|...
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 240 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLD 240 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCS
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccc
Confidence 466899999999999999999885 4579999999 9999999999998887 579999999764
No 278
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.25 E-value=0.00014 Score=75.66 Aligned_cols=72 Identities=24% Similarity=0.241 Sum_probs=53.6
Q ss_pred cccCHHHHHHHHHHhchh-hHHHHHHHhcCCCCccEEEeecCCCCHHHHHHHHHHHHHhcCCCCcccccccccccCCCcc
Q 014571 13 LRWNPQVEEYFIRAYGAD-HFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTI 91 (422)
Q Consensus 13 ~~~~~~v~~~l~~~~~~~-~~~~~~~~l~~pp~~~~~Rvnt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (422)
.++++.+.+++++.||.+ .++++++++.+||.. ++||||+|++++++++.|.+. | +
T Consensus 6 ~~~P~~~~~~~~~~~g~~~~~~~~~~a~~~~~p~-~lRvN~lk~~~~~~~~~L~~~---------g-------------~ 62 (479)
T 2frx_A 6 VYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRR-SIRVNTLKISVADFLQLTAPY---------G-------------W 62 (479)
T ss_dssp -CCCHHHHHHHGGGCC----CHHHHHHHTSCCCC-CEEECTTTCCHHHHHHHHGGG---------C-------------C
T ss_pred ccCcHHHHHHHHHHcCccHHHHHHHHhcCCCCCE-EEEEeCCCCCHHHHHHHHHHc---------C-------------C
Confidence 457888999999999976 579999999998875 599999999999998887643 3 3
Q ss_pred ccccCCCCCcEEEEeC
Q 014571 92 SESQIPGLEYVVFVKG 107 (422)
Q Consensus 92 ~~~~~~~l~~~l~~~~ 107 (422)
...+.|+.++.+++..
T Consensus 63 ~~~~~~~~~~~~~~~~ 78 (479)
T 2frx_A 63 TLTPIPWCEEGFWIER 78 (479)
T ss_dssp CCCEETTEEEEEC---
T ss_pred ceeecCCCCceEEEec
Confidence 3456777888887753
No 279
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.20 E-value=8.8e-05 Score=72.17 Aligned_cols=81 Identities=7% Similarity=-0.106 Sum_probs=65.1
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCC
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNS 340 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~ 340 (422)
.+..+||++||+|..+..+.+ +..+++.+|.++.-++.+++|++. ..++++++.|+.........+
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS---~~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~~~--------- 156 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR---SQDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALLPP--------- 156 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC---TTSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHCSC---------
T ss_pred cCCCceeEeCCcHHHHHHHcC---CCCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhcCC---------
Confidence 356789999999999888776 247999999999999999999976 367999999987765432211
Q ss_pred CCCCCCCceeecCCccc
Q 014571 341 KDNNYITSQTSDSMKLH 357 (422)
Q Consensus 341 ~~~~~FD~VLvDaPCSg 357 (422)
..+||.|++|||---
T Consensus 157 --~~~fdLVfiDPPYe~ 171 (283)
T 2oo3_A 157 --PEKRGLIFIDPSYER 171 (283)
T ss_dssp --TTSCEEEEECCCCCS
T ss_pred --CCCccEEEECCCCCC
Confidence 245999999999974
No 280
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.20 E-value=0.00054 Score=66.93 Aligned_cols=79 Identities=15% Similarity=0.064 Sum_probs=52.7
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEE-ecchhhhhhccCCCCCCccccC
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTY-KLDALKAVRRKNESNDEPNMCN 339 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~-~~Da~~~~~~~~~~~~~~~~~~ 339 (422)
+|.+|||++||+|+.|..+++. +.++|+|+|+++.+++...++ -..+... ..|.+...... .+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~~mL~~a~r~-----~~rv~~~~~~ni~~l~~~~--l~------- 148 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGTNQLVWKLRQ-----DDRVRSMEQYNFRYAEPVD--FT------- 148 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSSSCSCHHHHT-----CTTEEEECSCCGGGCCGGG--CT-------
T ss_pred cccEEEecCCCccHHHHHHHhC--CCCEEEEEECCHHHHHHHHHh-----CcccceecccCceecchhh--CC-------
Confidence 6789999999999999999886 357999999999999873321 1223222 23444332110 00
Q ss_pred CCCCCCCCceeecCCcccc
Q 014571 340 SKDNNYITSQTSDSMKLHK 358 (422)
Q Consensus 340 ~~~~~~FD~VLvDaPCSg~ 358 (422)
...||.|.+|......
T Consensus 149 ---~~~fD~v~~d~sf~sl 164 (291)
T 3hp7_A 149 ---EGLPSFASIDVSFISL 164 (291)
T ss_dssp ---TCCCSEEEECCSSSCG
T ss_pred ---CCCCCEEEEEeeHhhH
Confidence 1248999999876653
No 281
>2p38_A Protein involved in ribosomal biogenesis; two alpha/beta domains, PUA domain, biosynthetic protein; 1.80A {Pyrococcus abyssi}
Probab=97.13 E-value=0.00057 Score=61.45 Aligned_cols=62 Identities=19% Similarity=0.104 Sum_probs=54.0
Q ss_pred CCEEEEccccHHHHHcCCccccCceeeccCCccCCCEEEEeeccccccCCCCchhhhhhhcccCCCCCCCcccCCCceEE
Q 014571 123 PKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLYI 202 (422)
Q Consensus 123 ~k~ViVd~~~~eaVlrGA~v~~PGil~~~~~~~~gd~V~v~~~l~~~~~~p~W~~~~~r~~~~~~~~~~~~~~~~~~v~V 202 (422)
...|+||.++...++.|+||+.|||...+ ++.||.|.|+ +.++.++
T Consensus 95 k~kV~V~~~ae~~flyG~dV~k~gI~~~~--~~~~~~VvV~--------------------------------~~~~~pL 140 (166)
T 2p38_A 95 KNYVILGPKASFLFTTGKDAPKEAVREIK--WQGSKRVVVL--------------------------------NDLGDII 140 (166)
T ss_dssp SSEEEECHHHHHHHHTTCCBCGGGEEEEE--CSSCSEEEEE--------------------------------CTTSCEE
T ss_pred ccEEEECCcceEeeecCCCcchhcceEEe--ecCCCEEEEE--------------------------------ECCCcEE
Confidence 45899999999999999999999999999 9999999999 3378899
Q ss_pred EEccCccCHHHHhcccCcceeec
Q 014571 203 GQGTAMMSRAGIFRASEGIAVDM 225 (422)
Q Consensus 203 rvg~a~msreel~~~~~GiaV~~ 225 (422)
|+|.+.+| ++|.++..
T Consensus 141 G~G~a~~s-------~~gkvv~n 156 (166)
T 2p38_A 141 GIGLINPK-------SDRRFIKN 156 (166)
T ss_dssp EEEEECTT-------CSTTSEEE
T ss_pred EEEEEEEC-------CCCEEEEE
Confidence 99999876 66766653
No 282
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.09 E-value=0.0011 Score=66.91 Aligned_cols=84 Identities=11% Similarity=-0.051 Sum_probs=60.6
Q ss_pred CeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCCC
Q 014571 263 ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKD 342 (422)
Q Consensus 263 ~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~ 342 (422)
.+|+|+|||.||.+..+.+. +--.|+|+|+++..++..+.|. .+..+++.|.+++....... . ...
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~~~~~~~~~-~------~~~ 68 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSLLNAEIIKG-F------FKN 68 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGGCCHHHHHH-H------HCS
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhhcCHHHHHh-h------ccc
Confidence 47999999999999988776 2345789999999999998873 45677888888753211000 0 001
Q ss_pred CCCCCceeecCCccccCc
Q 014571 343 NNYITSQTSDSMKLHKEV 360 (422)
Q Consensus 343 ~~~FD~VLvDaPCSg~G~ 360 (422)
...+|.|+.++||.+-..
T Consensus 69 ~~~~D~i~ggpPCQ~fS~ 86 (376)
T 3g7u_A 69 DMPIDGIIGGPPCQGFSS 86 (376)
T ss_dssp CCCCCEEEECCCCCTTC-
T ss_pred CCCeeEEEecCCCCCccc
Confidence 245899999999998665
No 283
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.09 E-value=0.00053 Score=62.63 Aligned_cols=62 Identities=11% Similarity=-0.001 Sum_probs=49.7
Q ss_pred CCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCC
Q 014571 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSK 341 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~ 341 (422)
+.+|||++||+|..+..++.. +++|.++.+++.++++ ++.++.+|....+.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~~--------------- 98 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR-------GVFVLKGTAENLPL--------------- 98 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT-------TCEEEECBTTBCCS---------------
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc-------CCEEEEcccccCCC---------------
Confidence 889999999999999887653 9999999999998886 57888888765321
Q ss_pred CCCCCCceeec
Q 014571 342 DNNYITSQTSD 352 (422)
Q Consensus 342 ~~~~FD~VLvD 352 (422)
..+.||.|++.
T Consensus 99 ~~~~fD~v~~~ 109 (219)
T 1vlm_A 99 KDESFDFALMV 109 (219)
T ss_dssp CTTCEEEEEEE
T ss_pred CCCCeeEEEEc
Confidence 13468999873
No 284
>3u28_A H/ACA ribonucleoprotein complex subunit 4; pseudouridine synthase, pseudouridylation, H/ACA RNA; 1.90A {Saccharomyces cerevisiae} PDB: 3uai_A
Probab=97.09 E-value=0.00068 Score=68.74 Aligned_cols=74 Identities=22% Similarity=0.351 Sum_probs=66.7
Q ss_pred CCCEEEEccccHHHHHcCCccccCceeeccCCccCCCEEEEeeccccccCCCCchhhhhhhcccCCCCCCCcccCCCceE
Q 014571 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (422)
Q Consensus 122 ~~k~ViVd~~~~eaVlrGA~v~~PGil~~~~~~~~gd~V~v~~~l~~~~~~p~W~~~~~r~~~~~~~~~~~~~~~~~~v~ 201 (422)
+.+.|+|+...++++.+|+.+++||++..+.+++.||.|.++ ...+.+
T Consensus 265 ~lp~V~L~deaa~~V~NGq~L~~pgVl~~~~~i~~gd~VvVv--------------------------------t~kGel 312 (400)
T 3u28_A 265 GYKRIVVKDSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLI--------------------------------TTKGEA 312 (400)
T ss_dssp TSCEEEECHHHHHHHHHHSEEEGGGEEEECTTCCTTCEEEEE--------------------------------CTTCCE
T ss_pred hCCccccCHHHHHHHHCcCccccCccccccccCCCCCEEEEE--------------------------------eCCCcE
Confidence 567889999999999999999999999998889999999998 346789
Q ss_pred EEEccCccCHHHHhcccCcceeeccc
Q 014571 202 IGQGTAMMSRAGIFRASEGIAVDMHN 227 (422)
Q Consensus 202 Vrvg~a~msreel~~~~~GiaV~~~~ 227 (422)
|++|++.|+.+++...++|++++...
T Consensus 313 LAIG~A~mss~em~~~~~G~vvk~~r 338 (400)
T 3u28_A 313 IAVAIAQMSTVDLASCDHGVVASVKR 338 (400)
T ss_dssp EEEEEESSCHHHHHHCSSSEEEEEEE
T ss_pred EEEEEEEeCHHHHhhcCCcEEEEEEE
Confidence 99999999999999999999988653
No 285
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.06 E-value=0.0014 Score=62.68 Aligned_cols=85 Identities=11% Similarity=0.081 Sum_probs=58.4
Q ss_pred CCCCCeEEEecCCCChhHHHHHhcc------CC-----CcEEEEEcCCh---HHHH-----------HHHHHHHH-----
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLL------RD-----EGEVVAVDRSH---NKVM-----------DIQKLAAE----- 308 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~------~~-----~g~V~A~D~s~---~rl~-----------~l~~~l~r----- 308 (422)
.+++.+|||+|.|.|--++.+++.. .+ ..+++++|..+ ..+. .++++++.
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 4567899999999999998887754 34 36899999887 4444 34455544
Q ss_pred -------h--CCcceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecC
Q 014571 309 -------M--GLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDS 353 (422)
Q Consensus 309 -------~--g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDa 353 (422)
+ |..+++++.+|++....... . .....||.|++|+
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~---~-------~~~~~~D~iflD~ 181 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELISQLD---D-------SLNQKVDAWFLDG 181 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGGGSC---G-------GGTTCEEEEEECS
T ss_pred cchhheeccCCceEEEEEECcHHHHHhhcc---c-------ccCCeEEEEEECC
Confidence 1 23468899999998643221 0 0013699999996
No 286
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.05 E-value=0.00017 Score=70.48 Aligned_cols=37 Identities=19% Similarity=0.122 Sum_probs=31.3
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCCh
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~ 296 (422)
.++|.+|||+||||||.|-.+++.+ +...|+++|+..
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~ 115 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGI 115 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEecc
Confidence 3589999999999999999999875 345789999875
No 287
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.03 E-value=0.0014 Score=65.07 Aligned_cols=110 Identities=10% Similarity=-0.046 Sum_probs=77.8
Q ss_pred HHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCC
Q 014571 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESN 332 (422)
Q Consensus 253 v~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~ 332 (422)
++..++..+..+|+|++||+|..+..+++.. +..+++..|. +..++.+++++...+.++|+++.+|..+.+
T Consensus 171 ~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~------- 241 (353)
T 4a6d_A 171 VLTAFDLSVFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDP------- 241 (353)
T ss_dssp HHHSSCGGGCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSC-------
T ss_pred HHHhcCcccCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCC-------
Confidence 4445566778899999999999999999986 4578888997 788898888877666788999999975421
Q ss_pred CCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhcc-ceeccEEEe
Q 014571 333 DEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVG-LRIQKVLVL 406 (422)
Q Consensus 333 ~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~-lr~~~~~~~ 406 (422)
...+|.|++ . .+.+.|.... -.+||+++.. ++.+|.+++
T Consensus 242 ----------~~~~D~~~~-----~-----------~vlh~~~d~~---------~~~iL~~~~~al~pgg~lli 281 (353)
T 4a6d_A 242 ----------LPEADLYIL-----A-----------RVLHDWADGK---------CSHLLERIYHTCKPGGGILV 281 (353)
T ss_dssp ----------CCCCSEEEE-----E-----------SSGGGSCHHH---------HHHHHHHHHHHCCTTCEEEE
T ss_pred ----------CCCceEEEe-----e-----------eecccCCHHH---------HHHHHHHHHhhCCCCCEEEE
Confidence 112477765 1 1123465431 2467887754 888887776
No 288
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.00 E-value=0.00072 Score=67.25 Aligned_cols=81 Identities=11% Similarity=-0.062 Sum_probs=55.3
Q ss_pred CeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCCC
Q 014571 263 ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKD 342 (422)
Q Consensus 263 ~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~ 342 (422)
.+|+|++||.||.+..+.+.-.+-..|+|+|+++..++..+.|.. +..++.+|.+++....- .
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~~~------------~ 65 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLEEF------------D 65 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHHHH------------H
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHhHc------------C
Confidence 479999999999999988761111379999999999999999853 34467788876532110 0
Q ss_pred CCCCCceeecCCccccCc
Q 014571 343 NNYITSQTSDSMKLHKEV 360 (422)
Q Consensus 343 ~~~FD~VLvDaPCSg~G~ 360 (422)
...+|.|+.++||.+-..
T Consensus 66 ~~~~D~l~~gpPCq~fS~ 83 (343)
T 1g55_A 66 RLSFDMILMSPPCQPFTR 83 (343)
T ss_dssp HHCCSEEEECCC------
T ss_pred cCCcCEEEEcCCCcchhh
Confidence 114899999999988655
No 289
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=96.97 E-value=0.00055 Score=69.00 Aligned_cols=50 Identities=8% Similarity=-0.034 Sum_probs=42.7
Q ss_pred HHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHH
Q 014571 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKL 305 (422)
Q Consensus 253 v~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~ 305 (422)
+...+.+.++.+|||++||+|..+..+++. ..+|+++|+|+.+++.++++
T Consensus 99 l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~ 148 (416)
T 4e2x_A 99 FLATELTGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK 148 (416)
T ss_dssp HHHTTTCSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT
T ss_pred HHHHhCCCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc
Confidence 344566788999999999999999999986 35999999999999888765
No 290
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.93 E-value=0.0002 Score=68.01 Aligned_cols=84 Identities=13% Similarity=0.067 Sum_probs=59.9
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEec-chhhhhhccCCCCCCcc
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKL-DALKAVRRKNESNDEPN 336 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~-Da~~~~~~~~~~~~~~~ 336 (422)
.++||.+|+|++|||||.|-..+.+.+ ..+|+|+|+-...-+. -...+.+|...|++..+ |.....
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe~-P~~~~s~gwn~v~fk~gvDv~~~~----------- 141 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHEE-PVPMSTYGWNIVKLMSGKDVFYLP----------- 141 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSCC-CCCCCCTTTTSEEEECSCCGGGCC-----------
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCccC-cchhhhcCcCceEEEeccceeecC-----------
Confidence 367999999999999999987877754 4589999987653310 01124578888999988 864332
Q ss_pred ccCCCCCCCCCceeec-CCccccCc
Q 014571 337 MCNSKDNNYITSQTSD-SMKLHKEV 360 (422)
Q Consensus 337 ~~~~~~~~~FD~VLvD-aPCSg~G~ 360 (422)
...+|.|||| +|.|+.-.
T Consensus 142 ------~~~~DtllcDIgeSs~~~~ 160 (267)
T 3p8z_A 142 ------PEKCDTLLCDIGESSPSPT 160 (267)
T ss_dssp ------CCCCSEEEECCCCCCSCHH
T ss_pred ------CccccEEEEecCCCCCChh
Confidence 2448999999 47666533
No 291
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.88 E-value=0.0023 Score=61.95 Aligned_cols=60 Identities=17% Similarity=-0.003 Sum_probs=45.4
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchh
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDAL 322 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~ 322 (422)
.+|+.|||.+||+|.-+..++.+ ..+++++|+++..++.+++++++..-..-....+|++
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~~~~~~~~~~~~~ 293 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREVPGFSLEVLDGAT 293 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEECC--
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhccccchhhCCccc
Confidence 68999999999999877666654 3589999999999999999998864332233344544
No 292
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=96.84 E-value=0.00027 Score=68.52 Aligned_cols=38 Identities=21% Similarity=0.203 Sum_probs=31.9
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChH
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHN 297 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~ 297 (422)
++++.+|||+||||||.+-.+++.+ +...|+++|+...
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d 125 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQ 125 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccC
Confidence 5789999999999999998888765 3568899999764
No 293
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.84 E-value=0.0023 Score=63.30 Aligned_cols=76 Identities=14% Similarity=0.007 Sum_probs=58.4
Q ss_pred CCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCC
Q 014571 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSK 341 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~ 341 (422)
+-+|+|+|||.||.+..+.+. +--.|+|+|+++..++..+.|..... .+|.+++....
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a--G~~~v~~~e~d~~a~~t~~~N~~~~~-------~~Di~~~~~~~------------- 68 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC--GAECVYSNEWDKYAQEVYEMNFGEKP-------EGDITQVNEKT------------- 68 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEECCCHHHHHHHHHHHSCCC-------BSCGGGSCGGG-------------
T ss_pred CCcEEEECCCcCHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCCC-------cCCHHHcCHhh-------------
Confidence 568999999999999988775 23578999999999999999864321 57777653211
Q ss_pred CCCCCCceeecCCccccCc
Q 014571 342 DNNYITSQTSDSMKLHKEV 360 (422)
Q Consensus 342 ~~~~FD~VLvDaPCSg~G~ 360 (422)
...+|.|+.++||.+-..
T Consensus 69 -~~~~D~l~~gpPCQ~fS~ 86 (327)
T 2c7p_A 69 -IPDHDILCAGFPCQAFSI 86 (327)
T ss_dssp -SCCCSEEEEECCCTTTCT
T ss_pred -CCCCCEEEECCCCCCcch
Confidence 124899999999998655
No 294
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=96.83 E-value=0.001 Score=68.93 Aligned_cols=67 Identities=21% Similarity=0.140 Sum_probs=53.7
Q ss_pred cCHHHHHHHHHHhchhhHHHHHHHhcCCCCccEEEeecCCCCHHHHHHHHHHHHHhcCCCCcccccccccccCCCccccc
Q 014571 15 WNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISES 94 (422)
Q Consensus 15 ~~~~v~~~l~~~~~~~~~~~~~~~l~~pp~~~~~Rvnt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (422)
+++.+.+.+++.||. .++++++++..|+...+|||||+|+|++++++.|. ....
T Consensus 2 lP~w~~~~~~~~~g~-e~~~~l~a~~~~~~~~~lRvN~lk~~~~~~~~~l~-------------------------~~~~ 55 (464)
T 3m6w_A 2 LPKAFLSRMAELLGE-EFPAFLKALTEGKRTYGLRVNTLKLPPEAFQRISP-------------------------WPLR 55 (464)
T ss_dssp CCHHHHHHHHHHHGG-GHHHHHHHHHTSCCCCEEEECTTTCCHHHHHHHCS-------------------------SCCE
T ss_pred CcHHHHHHHHHHHHH-HHHHHHHHcCCCCCCeEEEEcCCCCCHHHHHHHcC-------------------------CCce
Confidence 456788899999995 59999999999956789999999999999977651 2234
Q ss_pred cCCCCCcEEEEeC
Q 014571 95 QIPGLEYVVFVKG 107 (422)
Q Consensus 95 ~~~~l~~~l~~~~ 107 (422)
+.|+.++.++++.
T Consensus 56 ~~~~~~~g~~l~~ 68 (464)
T 3m6w_A 56 PIPWCQEGFYYPE 68 (464)
T ss_dssp EETTEEEEEECCT
T ss_pred ecCCCCceEEECC
Confidence 5777888888764
No 295
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=96.76 E-value=0.00035 Score=67.65 Aligned_cols=38 Identities=16% Similarity=0.134 Sum_probs=30.3
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCCh
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH 296 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~ 296 (422)
..+++.+|||+||||||.|..+++.. +.+.|.++|+..
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGv 108 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGR 108 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCC
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhc-CCCcceeEEEec
Confidence 35788999999999999998888764 345777888773
No 296
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=96.74 E-value=0.00093 Score=62.68 Aligned_cols=43 Identities=23% Similarity=0.258 Sum_probs=37.2
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHH
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKL 305 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~ 305 (422)
+|.+|||++||+|+.|..+++. +..+|+|+|+++.+++.++++
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~--g~~~V~gvDis~~ml~~a~~~ 79 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN--GAKLVYALDVGTNQLAWKIRS 79 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSCCCCCHHHHT
T ss_pred CCCEEEEEccCCCHHHHHHHhc--CCCEEEEEcCCHHHHHHHHHh
Confidence 5779999999999999999987 235999999999999876654
No 297
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=96.68 E-value=0.0009 Score=60.61 Aligned_cols=65 Identities=8% Similarity=-0.021 Sum_probs=47.4
Q ss_pred HHHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCC
Q 014571 251 IVTAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNE 330 (422)
Q Consensus 251 ~lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~ 330 (422)
.+...+....++.+|||++||+|..+..++ .+|+++|+++. ++.+..+|....+.
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~---------------~~~~~~~d~~~~~~---- 111 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL---------------DPRVTVCDMAQVPL---- 111 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS---------------STTEEESCTTSCSC----
T ss_pred HHHHHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC---------------CceEEEeccccCCC----
Confidence 344444445688999999999999877663 57999999987 46677788765321
Q ss_pred CCCCccccCCCCCCCCCceee
Q 014571 331 SNDEPNMCNSKDNNYITSQTS 351 (422)
Q Consensus 331 ~~~~~~~~~~~~~~~FD~VLv 351 (422)
..+.||.|++
T Consensus 112 -----------~~~~fD~v~~ 121 (215)
T 2zfu_A 112 -----------EDESVDVAVF 121 (215)
T ss_dssp -----------CTTCEEEEEE
T ss_pred -----------CCCCEeEEEE
Confidence 1356899986
No 298
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=96.60 E-value=0.0026 Score=64.00 Aligned_cols=63 Identities=22% Similarity=0.476 Sum_probs=56.5
Q ss_pred CCCEEEEccccHHHHH-cCCccccCceeeccCCccCCCEEEEeeccccccCCCCchhhhhhhcccCCCCCCCcccCCCce
Q 014571 122 PPKEVIVSRKCAEAVL-RGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGL 200 (422)
Q Consensus 122 ~~k~ViVd~~~~eaVl-rGA~v~~PGil~~~~~~~~gd~V~v~~~l~~~~~~p~W~~~~~r~~~~~~~~~~~~~~~~~~v 200 (422)
....|+||.+|++|+. +|+.+.++||++.+..|+.||.|.+. .+.+.
T Consensus 274 ~~G~v~vD~gA~~al~~~g~sLl~~Gi~~v~g~F~~gd~V~i~--------------------------------~~~g~ 321 (367)
T 2j5v_A 274 PAGEITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRIC--------------------------------NLEGR 321 (367)
T ss_dssp CSCEEEECHHHHHHHHHHCCCBCGGGEEEEESCCCTTCEEEEE--------------------------------ETTCC
T ss_pred CCCEEEECcCHHHHHHhCCCccCCcccEEEECcccCCCEEEEE--------------------------------CCCCC
Confidence 4468999999999998 79999999999999999999999999 33577
Q ss_pred EEEEccCccCHHHHhc
Q 014571 201 YIGQGTAMMSRAGIFR 216 (422)
Q Consensus 201 ~Vrvg~a~msreel~~ 216 (422)
.|+.|.+..+.+|+.+
T Consensus 322 ~ia~G~~~y~s~e~~~ 337 (367)
T 2j5v_A 322 DIAHGVSRYNSDALRR 337 (367)
T ss_dssp EEEEEECSSCHHHHHH
T ss_pred EEEEEEecCCHHHHHH
Confidence 8999999999999864
No 299
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.48 E-value=0.0044 Score=60.17 Aligned_cols=81 Identities=10% Similarity=0.070 Sum_probs=63.8
Q ss_pred CCCCeEEEecCCCChhHHHHHhccC----CCcEEEEEcCCh--------------------------HHHHHHHHHHHHh
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLR----DEGEVVAVDRSH--------------------------NKVMDIQKLAAEM 309 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~----~~g~V~A~D~s~--------------------------~rl~~l~~~l~r~ 309 (422)
.....||+++.+.|+-+..+|+.+. +.++|+++|... .+++.+++++++.
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 3345999999999999999988764 368999999642 1577899999999
Q ss_pred CC--cceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecC
Q 014571 310 GL--KCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDS 353 (422)
Q Consensus 310 g~--~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDa 353 (422)
|+ ++|+++.+|+....... ..+.||.|.+|+
T Consensus 185 gl~~~~I~li~Gda~etL~~~-------------~~~~~d~vfIDa 217 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTA-------------PIDTLAVLRMDG 217 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTC-------------CCCCEEEEEECC
T ss_pred CCCcCceEEEEeCHHHHHhhC-------------CCCCEEEEEEcC
Confidence 98 68999999997654221 135689999997
No 300
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.38 E-value=0.0084 Score=60.92 Aligned_cols=63 Identities=14% Similarity=0.141 Sum_probs=53.2
Q ss_pred cCCCCCCeEEEecCCCChhHHHHH-hccCCCcEEEEEcCChHHHHHHHHHHHHh---CC-cceEEEec
Q 014571 257 LDPQKGERILDMCAAPGGKTTAIA-SLLRDEGEVVAVDRSHNKVMDIQKLAAEM---GL-KCITTYKL 319 (422)
Q Consensus 257 L~p~pg~~VLD~CAgpGgKT~~la-~l~~~~g~V~A~D~s~~rl~~l~~~l~r~---g~-~nv~~~~~ 319 (422)
+.+++|+.|+|++|..|..|..++ ...++.++|+|+|.++.-.+.+++|++.+ +. +|++++..
T Consensus 222 ~~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~ 289 (409)
T 2py6_A 222 LRFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGC 289 (409)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECS
T ss_pred cccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEe
Confidence 346899999999999999999988 45544589999999999999999999983 46 78877664
No 301
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=96.33 E-value=0.0026 Score=62.62 Aligned_cols=66 Identities=18% Similarity=0.067 Sum_probs=50.2
Q ss_pred HHHhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchh
Q 014571 253 TAHALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDAL 322 (422)
Q Consensus 253 v~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~ 322 (422)
+...++..++.+|||++||+|..+..+++... ..+++++|.+ ..+. ++++++.+. .+|+++.+|..
T Consensus 176 ~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~ 242 (348)
T 3lst_A 176 LARAGDFPATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFL 242 (348)
T ss_dssp HHHHSCCCSSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTT
T ss_pred HHHhCCccCCceEEEECCccCHHHHHHHHHCC-CCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCC
Confidence 44556778899999999999999999999864 5789999994 4444 444444454 45999999875
No 302
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.22 E-value=0.0059 Score=63.17 Aligned_cols=48 Identities=21% Similarity=0.115 Sum_probs=41.1
Q ss_pred cccCHHHHHHHHHHhchhhHHHHHHHhcCCCCccEEEeecCCCCHHHHHHH
Q 014571 13 LRWNPQVEEYFIRAYGADHFSRISKALTRPSCYSCIRVNTLKTTTDDVIQK 63 (422)
Q Consensus 13 ~~~~~~v~~~l~~~~~~~~~~~~~~~l~~pp~~~~~Rvnt~~~~~~~~~~~ 63 (422)
+++++.+.+.+++.||.+ ++++++++.+||.+.+|||||+|+ +++++.
T Consensus 6 ~~~P~w~~~~~~~~~g~e-~~~~~~a~~~~~~~~~lRvN~lk~--~~~~~~ 53 (456)
T 3m4x_A 6 TTLPQQFIKKYRLLLGEE-ASDFFSALEQGSVKKGFRWNPLKP--AGLDMV 53 (456)
T ss_dssp -CCCHHHHHHHHHHHGGG-HHHHHHHHHHCCCCCEEECCTTST--THHHHH
T ss_pred hhChHHHHHHHHHHhCHH-HHHHHHHcCCCCCCcEEEEcCccH--HHHHHh
Confidence 457788999999999955 999999999999988999999998 666554
No 303
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.14 E-value=0.0051 Score=60.09 Aligned_cols=80 Identities=15% Similarity=0.110 Sum_probs=53.4
Q ss_pred CCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEec-chhhhhhccCCCCCCcc
Q 014571 258 DPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKL-DALKAVRRKNESNDEPN 336 (422)
Q Consensus 258 ~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~-Da~~~~~~~~~~~~~~~ 336 (422)
.++++.+|||++|||||.|-..+.+-+ ..+|+|+|+-...-+. -...+.+|...|.+... |.+.+.
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he~-P~~~~ql~w~lV~~~~~~Dv~~l~----------- 157 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHEE-PQLVQSYGWNIVTMKSGVDVFYRP----------- 157 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSCC-CCCCCBTTGGGEEEECSCCTTSSC-----------
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCccC-cchhhhcCCcceEEEeccCHhhCC-----------
Confidence 357899999999999999987777643 4589999998652210 00012344445777766 654432
Q ss_pred ccCCCCCCCCCceeecCCcc
Q 014571 337 MCNSKDNNYITSQTSDSMKL 356 (422)
Q Consensus 337 ~~~~~~~~~FD~VLvDaPCS 356 (422)
...+|.|+||.--|
T Consensus 158 ------~~~~D~ivcDigeS 171 (321)
T 3lkz_A 158 ------SECCDTLLCDIGES 171 (321)
T ss_dssp ------CCCCSEEEECCCCC
T ss_pred ------CCCCCEEEEECccC
Confidence 24479999998733
No 304
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.03 E-value=0.013 Score=57.23 Aligned_cols=84 Identities=10% Similarity=0.004 Sum_probs=60.9
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcE-EEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcccc
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGE-VVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMC 338 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~-V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~ 338 (422)
+.+-+|+|+|||.||-+..+.+. +-+.. |+|+|+++..++..+.|. .+..++..|.+++....- +
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~-----~~~~~~~~DI~~i~~~~i--~------ 79 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH-----QGKIMYVGDVRSVTQKHI--Q------ 79 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT-----TTCEEEECCGGGCCHHHH--H------
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC-----CCCceeCCChHHccHHHh--c------
Confidence 45678999999999999888775 22222 699999999998888763 334677888887643210 0
Q ss_pred CCCCCCCCCceeecCCccccCc
Q 014571 339 NSKDNNYITSQTSDSMKLHKEV 360 (422)
Q Consensus 339 ~~~~~~~FD~VLvDaPCSg~G~ 360 (422)
....+|.++..+||.+-..
T Consensus 80 ---~~~~~Dll~ggpPCQ~fS~ 98 (295)
T 2qrv_A 80 ---EWGPFDLVIGGSPCNDLSI 98 (295)
T ss_dssp ---HTCCCSEEEECCCCGGGBT
T ss_pred ---ccCCcCEEEecCCCccccc
Confidence 0135899999999998655
No 305
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=95.78 E-value=0.0089 Score=58.80 Aligned_cols=57 Identities=18% Similarity=0.179 Sum_probs=46.7
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhh
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~ 323 (422)
..++.+|||++||+|..+..+++.. +..+++++|+ +.+++.+++ ..+++++.+|...
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~ 242 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSG------SNNLTYVGGDMFT 242 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------BTTEEEEECCTTT
T ss_pred cccCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhccc------CCCcEEEeccccC
Confidence 4567899999999999999999876 3579999999 888876654 2468999988753
No 306
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=95.74 E-value=0.015 Score=58.10 Aligned_cols=82 Identities=13% Similarity=0.042 Sum_probs=61.7
Q ss_pred cceEEEeChhH-HHHHHhcCCCC------CCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 240 EGEIFLQNLPS-IVTAHALDPQK------GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 240 ~G~~~~Qd~~S-~lv~~~L~p~p------g~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
-|.-++.|..- .-++..+++++ ++.|||++.|+|..|..|++... ..+|+|+|+++..+..+++.. ...
T Consensus 30 lGQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~---~~~ 105 (353)
T 1i4w_A 30 YGFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF---EGS 105 (353)
T ss_dssp GGCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT---TTS
T ss_pred CCcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc---cCC
Confidence 34445555432 23455566664 69999999999999999998632 258999999999999998876 246
Q ss_pred ceEEEecchhhhh
Q 014571 313 CITTYKLDALKAV 325 (422)
Q Consensus 313 nv~~~~~Da~~~~ 325 (422)
+++++.+|+.++.
T Consensus 106 ~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 106 PLQILKRDPYDWS 118 (353)
T ss_dssp SCEEECSCTTCHH
T ss_pred CEEEEECCccchh
Confidence 8999999997664
No 307
>1sqw_A Saccharomyces cerevisiae NIP7P homolog; PUA, unknown function; 1.90A {Homo sapiens} SCOP: b.122.1.1 d.17.6.3 PDB: 1t5y_A
Probab=95.74 E-value=0.015 Score=53.07 Aligned_cols=73 Identities=18% Similarity=0.176 Sum_probs=63.6
Q ss_pred CCCEEEEccccHHHHHcCCccccCceeeccCCccCCCEEEEeeccccccCCCCchhhhhhhcccCCCCCCCcccCCCceE
Q 014571 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (422)
Q Consensus 122 ~~k~ViVd~~~~eaVlrGA~v~~PGil~~~~~~~~gd~V~v~~~l~~~~~~p~W~~~~~r~~~~~~~~~~~~~~~~~~v~ 201 (422)
....|+|...+...++-|-||+..+|..++.+++.||.|.|+ ..+..+
T Consensus 93 ~~~kV~Vk~~~E~~flyG~nVfk~~V~~i~e~i~~~~~VvV~--------------------------------n~~d~p 140 (188)
T 1sqw_A 93 AKYKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVY--------------------------------SMADIP 140 (188)
T ss_dssp CSCEEEECHHHHHHHTTTCCEEGGGEEEECTTCCTTCEEEEE--------------------------------ETTCCE
T ss_pred cCcEEEECCCceeeEEeccchhHHhhhhcCCCCCCCCEEEEE--------------------------------eCCCCE
Confidence 346889999999999999999999999999999999999999 346789
Q ss_pred EEEccCccCHHHHhc-ccCcceeecc
Q 014571 202 IGQGTAMMSRAGIFR-ASEGIAVDMH 226 (422)
Q Consensus 202 Vrvg~a~msreel~~-~~~GiaV~~~ 226 (422)
+|+|++..|.+++.+ .+.|+.+...
T Consensus 141 LG~G~a~~s~~e~~~~~~~~~vv~~q 166 (188)
T 1sqw_A 141 LGFGVAAKSTQDCRKVDPMAIVVFHQ 166 (188)
T ss_dssp EEEEEESSCHHHHHHSCTTSEEEEEE
T ss_pred EEEEEeecCHHHHHhcCCCcEEEEEc
Confidence 999999999999987 5667766533
No 308
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=95.74 E-value=0.012 Score=58.45 Aligned_cols=57 Identities=14% Similarity=0.057 Sum_probs=47.3
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhh
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~ 323 (422)
..++.+|||++||+|..+..+++.. +..+++++|+ +..++.+++ ..+++++.+|...
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~ 263 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPP------LSGIEHVGGDMFA 263 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhh------cCCCEEEeCCccc
Confidence 5678999999999999999999986 4578999999 888876654 2569999998764
No 309
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=95.71 E-value=0.02 Score=57.87 Aligned_cols=117 Identities=15% Similarity=0.116 Sum_probs=78.7
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh-----CC---cceEEEecchhhhhhccCCC
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM-----GL---KCITTYKLDALKAVRRKNES 331 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~-----g~---~nv~~~~~Da~~~~~~~~~~ 331 (422)
.+..+||=++.|-|+-...+.+. . ..+|+.+|+++.-++.+++-+... .. ++++++..|++.+.....
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~-- 279 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYA-- 279 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHH--
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhh--
Confidence 35689999999999988888875 3 479999999999999998865321 11 348999999998764321
Q ss_pred CCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHh-ccceeccEEEe
Q 014571 332 NDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALV-VGLRIQKVLVL 406 (422)
Q Consensus 332 ~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a-~~lr~~~~~~~ 406 (422)
...++||.|++|.+-...+. .|. +. ....-.++.++.+ ..|+.+|+++.
T Consensus 280 ---------~~~~~yDvIIvDl~D~~~s~------~p~--------g~---a~~Lft~eFy~~~~~~L~p~GVlv~ 329 (381)
T 3c6k_A 280 ---------KEGREFDYVINDLTAVPIST------SPE--------ED---STWEFLRLILDLSMKVLKQDGKYFT 329 (381)
T ss_dssp ---------HHTCCEEEEEEECCSSCCCC------C---------------CHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ---------hccCceeEEEECCCCCcccC------ccc--------Cc---chHHHHHHHHHHHHHhcCCCCEEEE
Confidence 01356999999986433222 111 11 0112345666665 34888888885
No 310
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.67 E-value=0.014 Score=57.80 Aligned_cols=80 Identities=13% Similarity=-0.032 Sum_probs=57.1
Q ss_pred eEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCCCC
Q 014571 264 RILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDN 343 (422)
Q Consensus 264 ~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~ 343 (422)
+++|+|||.||.+..+.+.--+--.|.|+|+++...+..+.|.. ...++..|.+++..... ..
T Consensus 5 ~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~~DI~~~~~~~~------------~~ 67 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP-----ETNLLNRNIQQLTPQVI------------KK 67 (333)
T ss_dssp EEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECCCGGGCCHHHH------------HH
T ss_pred EEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC-----CCceeccccccCCHHHh------------cc
Confidence 79999999999998887651111357899999999999988742 33456778776532210 01
Q ss_pred CCCCceeecCCccccCc
Q 014571 344 NYITSQTSDSMKLHKEV 360 (422)
Q Consensus 344 ~~FD~VLvDaPCSg~G~ 360 (422)
..+|.++..+||.+-..
T Consensus 68 ~~~D~l~ggpPCQ~fS~ 84 (333)
T 4h0n_A 68 WNVDTILMSPPCQPFTR 84 (333)
T ss_dssp TTCCEEEECCCCCCSEE
T ss_pred CCCCEEEecCCCcchhh
Confidence 24799999999988544
No 311
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.61 E-value=0.014 Score=55.32 Aligned_cols=50 Identities=12% Similarity=0.205 Sum_probs=39.1
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~ 311 (422)
..+|+.|||.+||.|.-+...+++ ..+.+++|+++.-++.+++|++..++
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 378999999999999755444443 35899999999999999999987654
No 312
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=95.50 E-value=0.047 Score=53.27 Aligned_cols=85 Identities=11% Similarity=0.062 Sum_probs=66.2
Q ss_pred HhcCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHh--C---CcceEEEecchhhhhhccC
Q 014571 255 HALDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEM--G---LKCITTYKLDALKAVRRKN 329 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~--g---~~nv~~~~~Da~~~~~~~~ 329 (422)
..+.|. ..+||=++.|-|+-+..++..- +..+|+.+|+++.-++..++-+... | -++++++.+|++.+...
T Consensus 78 l~~~p~-pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~-- 153 (294)
T 3o4f_A 78 LLAHGH-AKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ-- 153 (294)
T ss_dssp HHHSSC-CCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC--
T ss_pred HhhCCC-CCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhh--
Confidence 334444 4699999999999988888763 3468999999999999999887553 2 25699999999987532
Q ss_pred CCCCCccccCCCCCCCCCceeecCCc
Q 014571 330 ESNDEPNMCNSKDNNYITSQTSDSMK 355 (422)
Q Consensus 330 ~~~~~~~~~~~~~~~~FD~VLvDaPC 355 (422)
..++||.|++|.+-
T Consensus 154 ------------~~~~yDvIi~D~~d 167 (294)
T 3o4f_A 154 ------------TSQTFDVIISDCTD 167 (294)
T ss_dssp ------------SSCCEEEEEESCCC
T ss_pred ------------ccccCCEEEEeCCC
Confidence 24679999999864
No 313
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=95.40 E-value=0.028 Score=60.34 Aligned_cols=62 Identities=11% Similarity=-0.015 Sum_probs=48.5
Q ss_pred CCeEEEecCCCChh---HHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEEEecchhhh
Q 014571 262 GERILDMCAAPGGK---TTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgK---T~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~~ 324 (422)
+..|||++||+|-- ++..++..+...+|+|+|.++ +...+++..+..|+.+ |+++++|.+.+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev 423 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREW 423 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceec
Confidence 45799999999987 555555544445899999996 5667777788888854 99999999875
No 314
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=95.35 E-value=0.0054 Score=53.71 Aligned_cols=62 Identities=10% Similarity=0.028 Sum_probs=46.2
Q ss_pred cCCCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCcc
Q 014571 257 LDPQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPN 336 (422)
Q Consensus 257 L~p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~ 336 (422)
+.+++|++|||+++|. +++|.|+.+++.+++++.. ++.+.++|+...+...
T Consensus 8 ~g~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~----~~~~~~~d~~~~~~~~-------- 58 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN----EGRVSVENIKQLLQSA-------- 58 (176)
T ss_dssp TTCCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT----TSEEEEEEGGGGGGGC--------
T ss_pred cCCCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc----CcEEEEechhcCcccc--------
Confidence 4678999999999875 2399999999999887532 4889999988764210
Q ss_pred ccCCCCCCCCCceee
Q 014571 337 MCNSKDNNYITSQTS 351 (422)
Q Consensus 337 ~~~~~~~~~FD~VLv 351 (422)
...+.||.|++
T Consensus 59 ----~~~~~fD~V~~ 69 (176)
T 2ld4_A 59 ----HKESSFDIILS 69 (176)
T ss_dssp ----CCSSCEEEEEE
T ss_pred ----CCCCCEeEEEE
Confidence 01356899986
No 315
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.24 E-value=0.046 Score=53.04 Aligned_cols=76 Identities=8% Similarity=-0.042 Sum_probs=57.7
Q ss_pred CeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCCC
Q 014571 263 ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKD 342 (422)
Q Consensus 263 ~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~ 342 (422)
.+|+|++||.||.+.-+-+. + --.|.|+|+++..++..+.|. + -.++.+|.+++....
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G-~~~v~a~e~d~~a~~ty~~N~---~---~~~~~~DI~~i~~~~-------------- 58 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-G-FRIICANEYDKSIWKTYESNH---S---AKLIKGDISKISSDE-------------- 58 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-T-CEEEEEEECCTTTHHHHHHHC---C---SEEEESCGGGCCGGG--------------
T ss_pred CeEEEeCcCccHHHHHHHHC-C-CEEEEEEeCCHHHHHHHHHHC---C---CCcccCChhhCCHhh--------------
Confidence 37999999999999888665 2 236789999999999998873 2 256778888754221
Q ss_pred CCCCCceeecCCccccCc
Q 014571 343 NNYITSQTSDSMKLHKEV 360 (422)
Q Consensus 343 ~~~FD~VLvDaPCSg~G~ 360 (422)
-..+|.++--+||.+--.
T Consensus 59 ~~~~D~l~ggpPCQ~fS~ 76 (331)
T 3ubt_Y 59 FPKCDGIIGGPPSQSWSE 76 (331)
T ss_dssp SCCCSEEECCCCGGGTEE
T ss_pred CCcccEEEecCCCCCcCC
Confidence 124799999999998655
No 316
>2aus_C Pseudouridine synthase; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_A 3lwo_A* 3lwq_A* 3lwp_A 3lwv_A 3hax_A* 2hvy_A* 3hay_A* 2ey4_A 2rfk_A 3mqk_A 3hjw_A* 3hjy_A
Probab=95.10 E-value=0.034 Score=55.23 Aligned_cols=74 Identities=31% Similarity=0.507 Sum_probs=62.8
Q ss_pred CCCEEEEccccHHHHHcCCccccCceeeccCCccCCCEEEEeeccccccCCCCchhhhhhhcccCCCCCCCcccCCCceE
Q 014571 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (422)
Q Consensus 122 ~~k~ViVd~~~~eaVlrGA~v~~PGil~~~~~~~~gd~V~v~~~l~~~~~~p~W~~~~~r~~~~~~~~~~~~~~~~~~v~ 201 (422)
+.+.|+|+...+..+.+|+.++.||+...+.+++.|+.|.++ ...+.+
T Consensus 249 ~~p~V~L~de~a~~V~nGq~L~~~gv~~~~~~i~~gd~V~V~--------------------------------~~~G~f 296 (334)
T 2aus_C 249 HLPKIWIKDSAVAAVAHGANLTVPGIVKLNAGIKKGDLVAIM--------------------------------TLKDEL 296 (334)
T ss_dssp TSCEEEECHHHHHHHHTTCCEEGGGEEEEETTCCTTCEEEEE--------------------------------ETTCCE
T ss_pred cccEEEECHHHHHHHHCCCccccCcccccccccCCCCEEEEE--------------------------------ecCCeE
Confidence 567889999999999999999999988777778889988888 234679
Q ss_pred EEEccCccCHHHHhcccCcceeeccc
Q 014571 202 IGQGTAMMSRAGIFRASEGIAVDMHN 227 (422)
Q Consensus 202 Vrvg~a~msreel~~~~~GiaV~~~~ 227 (422)
|+++.+.++.+++....+|..+++..
T Consensus 297 LAIGe~~~s~~e~~~~~~G~~vKp~r 322 (334)
T 2aus_C 297 VALGKAMMSTQEMIERSKGIAVDVEK 322 (334)
T ss_dssp EEEEEESSCHHHHHHCSSSEEEEEEE
T ss_pred EEEEEeccCchhccccCCCeEEEEEE
Confidence 99999999999999888897766543
No 317
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.04 E-value=0.018 Score=56.85 Aligned_cols=79 Identities=6% Similarity=-0.067 Sum_probs=55.8
Q ss_pred CCeEEEecCCCChhHHHHHhccCCCcEE-EEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCC
Q 014571 262 GERILDMCAAPGGKTTAIASLLRDEGEV-VAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNS 340 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~~~g~V-~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~ 340 (422)
.-+++|+|||.||.+..+.+.--+--.| .|+|+++..++..+.|... . ++..|.+++....-
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~---~---~~~~DI~~~~~~~i----------- 72 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE---E---VQVKNLDSISIKQI----------- 72 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC---C---CBCCCTTTCCHHHH-----------
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC---C---cccCChhhcCHHHh-----------
Confidence 4589999999999998887751011246 6999999999999988521 1 45667665432110
Q ss_pred CCCCCCCceeecCCcccc
Q 014571 341 KDNNYITSQTSDSMKLHK 358 (422)
Q Consensus 341 ~~~~~FD~VLvDaPCSg~ 358 (422)
....+|.++..+||.+-
T Consensus 73 -~~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 73 -ESLNCNTWFMSPPCQPY 89 (327)
T ss_dssp -HHTCCCEEEECCCCTTC
T ss_pred -ccCCCCEEEecCCccCc
Confidence 01257999999999987
No 318
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=94.57 E-value=0.026 Score=56.12 Aligned_cols=57 Identities=12% Similarity=0.132 Sum_probs=46.8
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhh
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~ 323 (422)
..++.+|||++||+|..+..+++.. +..+++++|+ +..++.+++ ..+|+++.+|...
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~ 257 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPA------FSGVEHLGGDMFD 257 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhh------cCCCEEEecCCCC
Confidence 5668899999999999999999986 4578999999 777766553 2579999999764
No 319
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=94.56 E-value=0.034 Score=54.65 Aligned_cols=57 Identities=18% Similarity=0.187 Sum_probs=45.7
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhh
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~ 323 (422)
..++.+|||++||+|..+..+++.. +..+++++|. +..++.+++ ..+|+++.+|...
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~ 247 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFK 247 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCC------CSSEEEEECCTTT
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhccc------CCCcEEEeCccCC
Confidence 3467899999999999999999986 4578999999 677765543 3569999988754
No 320
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=94.47 E-value=0.031 Score=55.43 Aligned_cols=61 Identities=16% Similarity=0.132 Sum_probs=48.7
Q ss_pred HhcC-CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhh
Q 014571 255 HALD-PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (422)
Q Consensus 255 ~~L~-p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~ 323 (422)
..++ ..++.+|||++||+|..+..+++.. +..+++++|+ +..++.+++ ..+|+++.+|...
T Consensus 194 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~D~~~ 255 (364)
T 3p9c_A 194 ELYHGFEGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQ------FPGVTHVGGDMFK 255 (364)
T ss_dssp HHCCTTTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT
T ss_pred HhcccccCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhh------cCCeEEEeCCcCC
Confidence 3444 6678999999999999999999986 4578999999 777765543 2579999999764
No 321
>2apo_A Probable tRNA pseudouridine synthase B; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: b.122.1.1 d.265.1.2
Probab=94.47 E-value=0.06 Score=53.85 Aligned_cols=73 Identities=34% Similarity=0.552 Sum_probs=61.6
Q ss_pred CCCEEEEccccHHHHHcCCccccCceeeccCCccCCCEEEEeeccccccCCCCchhhhhhhcccCCCCCCCcccCCCceE
Q 014571 122 PPKEVIVSRKCAEAVLRGAQVYVPGVMACSSHVEKGDVVAVSVAVEQPTLDGGWGLGITRGTVLQGSQTDPYYFERSGLY 201 (422)
Q Consensus 122 ~~k~ViVd~~~~eaVlrGA~v~~PGil~~~~~~~~gd~V~v~~~l~~~~~~p~W~~~~~r~~~~~~~~~~~~~~~~~~v~ 201 (422)
..+.|+|+..++.++..|+.++.||+...+..+..|+.|.++ ...+.+
T Consensus 268 ~lP~v~l~~~~~~~i~nG~~L~~pgi~~~~~~i~~gd~V~v~--------------------------------~~~G~f 315 (357)
T 2apo_A 268 HLKKVVVKDSAVDAICHGADVYVRGIAKLSKGIGKGETVLVE--------------------------------TLKGEA 315 (357)
T ss_dssp TSEEEEECHHHHHHHHTTCCEEGGGEEEEETTCCTTCEEEEE--------------------------------CTTSCE
T ss_pred cCcEEEECHHHHHHHhCcCccCCCcccccccccCCCCeEEEE--------------------------------cCCCEE
Confidence 467889999999999999999999987776678888888887 335679
Q ss_pred EEEccCccCHHHHhcccCcceeecc
Q 014571 202 IGQGTAMMSRAGIFRASEGIAVDMH 226 (422)
Q Consensus 202 Vrvg~a~msreel~~~~~GiaV~~~ 226 (422)
|+++.+.++.+++....+|..+++.
T Consensus 316 lAIGea~~~~~ei~~~~kG~vvKp~ 340 (357)
T 2apo_A 316 VAVGKALMNTKEILNADKGVAVDVE 340 (357)
T ss_dssp EEEEEESSCHHHHHHCSSSEEEEEE
T ss_pred EEEEEeccccccccccCCCeEEEEE
Confidence 9999999999999988889766654
No 322
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=94.40 E-value=0.085 Score=51.61 Aligned_cols=103 Identities=13% Similarity=-0.011 Sum_probs=65.1
Q ss_pred CCCCCCeEEEecC------CCChhHHHHHhccCCC-cEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCC
Q 014571 258 DPQKGERILDMCA------APGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNE 330 (422)
Q Consensus 258 ~p~pg~~VLD~CA------gpGgKT~~la~l~~~~-g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~ 330 (422)
.+.-|++|||++| |||+ ..+.+. .+. +.|+++|+.+-.. ..+ .++++|.+...
T Consensus 106 ~vp~gmrVLDLGA~s~kg~APGS--~VLr~~-~p~g~~VVavDL~~~~s-----------da~-~~IqGD~~~~~----- 165 (344)
T 3r24_A 106 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQW-LPTGTLLVDSDLNDFVS-----------DAD-STLIGDCATVH----- 165 (344)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHH-SCTTCEEEEEESSCCBC-----------SSS-EEEESCGGGEE-----
T ss_pred eecCCCEEEeCCCCCCCCCCCcH--HHHHHh-CCCCcEEEEeeCccccc-----------CCC-eEEEccccccc-----
Confidence 3557999999997 9998 444555 555 5999999986321 122 44889965422
Q ss_pred CCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhccceeccEEEe
Q 014571 331 SNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVGLRIQKVLVL 406 (422)
Q Consensus 331 ~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~lr~~~~~~~ 406 (422)
....||.||.|.-..-+|. +.-+ +... ..|.++-.++..+ -|+.+|.++.
T Consensus 166 -----------~~~k~DLVISDMAPNtTG~-----~D~d-----~~Rs---~~L~ElALdfA~~--~LkpGGsFvV 215 (344)
T 3r24_A 166 -----------TANKWDLIISDMYDPRTKH-----VTKE-----NDSK---EGFFTYLCGFIKQ--KLALGGSIAV 215 (344)
T ss_dssp -----------ESSCEEEEEECCCCTTSCS-----SCSC-----CCCC---CTHHHHHHHHHHH--HEEEEEEEEE
T ss_pred -----------cCCCCCEEEecCCCCcCCc-----cccc-----hhHH---HHHHHHHHHHHHH--hCcCCCEEEE
Confidence 1356899999976655665 1111 1111 2466665555543 3678888887
No 323
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=93.79 E-value=0.11 Score=53.94 Aligned_cols=95 Identities=11% Similarity=0.001 Sum_probs=59.5
Q ss_pred CCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCC-cc-ccC
Q 014571 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDE-PN-MCN 339 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~-~~-~~~ 339 (422)
.-+++|+|||.||.+.-+.+. +--.|+|+|+++..++..+.|... .++..++..|.+++.......... .. ...
T Consensus 88 ~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~--~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i 163 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYC--DPATHHFNEDIRDITLSHQEGVSDEAAAEHI 163 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCC--CTTTCEEESCTHHHHCTTCTTSCHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhccc--CCCcceeccchhhhhhccccccchhhHHhhh
Confidence 458999999999999888765 223589999999999988877411 123456778988765321000000 00 000
Q ss_pred CCCCCCCCceeecCCccccCc
Q 014571 340 SKDNNYITSQTSDSMKLHKEV 360 (422)
Q Consensus 340 ~~~~~~FD~VLvDaPCSg~G~ 360 (422)
......+|.++..+||-+-..
T Consensus 164 ~~~~~~~Dvl~gGpPCQ~FS~ 184 (482)
T 3me5_A 164 RQHIPEHDVLLAGFPCQPFSL 184 (482)
T ss_dssp HHHSCCCSEEEEECCCCCC--
T ss_pred hhcCCCCCEEEecCCCcchhh
Confidence 001134799999999998654
No 324
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=92.84 E-value=0.094 Score=51.19 Aligned_cols=26 Identities=38% Similarity=0.454 Sum_probs=21.3
Q ss_pred CCCccEEEeecCCCCHHHHHHHHHHH
Q 014571 42 PSCYSCIRVNTLKTTTDDVIQKLLAI 67 (422)
Q Consensus 42 pp~~~~~Rvnt~~~~~~~~~~~l~~~ 67 (422)
.+.-.++||||+|+|++++++.|.+.
T Consensus 8 ~~~p~~lRvN~lk~~~~~~~~~L~~~ 33 (309)
T 2b9e_A 8 SQLPRFVRVNTLKTCSDDVVDYFKRQ 33 (309)
T ss_dssp -CCCEEEEECTTTCCHHHHHHHHHHT
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHhC
Confidence 34557899999999999999988754
No 325
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=92.70 E-value=0.12 Score=56.18 Aligned_cols=64 Identities=14% Similarity=0.087 Sum_probs=47.3
Q ss_pred CCeEEEecCCCChhHHHHHhc---cC---------CCcEEEEEcCChHHHHHHHHHHHHhCCcc-eEEEecchhhhhh
Q 014571 262 GERILDMCAAPGGKTTAIASL---LR---------DEGEVVAVDRSHNKVMDIQKLAAEMGLKC-ITTYKLDALKAVR 326 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l---~~---------~~g~V~A~D~s~~rl~~l~~~l~r~g~~n-v~~~~~Da~~~~~ 326 (422)
+..|||++||+|-.+...+.. .+ ...+|+|+|.++.-+..++.+.. .|+.+ |+++.+|.+.+..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccc
Confidence 457999999999986433222 22 23599999999977766666554 67755 9999999998754
No 326
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=92.29 E-value=0.078 Score=46.72 Aligned_cols=39 Identities=15% Similarity=0.065 Sum_probs=31.9
Q ss_pred CCCCeEEEecCCCC-hhHHHHHhccCCCcEEEEEcCChHHHH
Q 014571 260 QKGERILDMCAAPG-GKTTAIASLLRDEGEVVAVDRSHNKVM 300 (422)
Q Consensus 260 ~pg~~VLD~CAgpG-gKT~~la~l~~~~g~V~A~D~s~~rl~ 300 (422)
.++.+|||++||+| .-+..|++.. .-.|+|+|+++..+.
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG 73 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT
T ss_pred CCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc
Confidence 45789999999999 5888888742 357999999987766
No 327
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=91.49 E-value=0.14 Score=48.53 Aligned_cols=38 Identities=29% Similarity=0.330 Sum_probs=29.5
Q ss_pred ccEEEeecCCCCHHHHHHHHHHHHHhcCCCCcccccccccccCCCccccccCCCCCcEEEE
Q 014571 45 YSCIRVNTLKTTTDDVIQKLLAIIQNSGSSEADVASSVKGRLQNGTISESQIPGLEYVVFV 105 (422)
Q Consensus 45 ~~~~Rvnt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 105 (422)
..++||||+|+|++++++.|.+. | +.+.+ ++.++.+.+
T Consensus 10 ~~~~rvn~~~~~~~~~~~~l~~~---------g-------------~~~~~-~~~~~~~~~ 47 (274)
T 3ajd_A 10 MQFIRVNTLKINPEVLKKRLENK---------G-------------VVLEK-TFLDYAFEV 47 (274)
T ss_dssp CEEEEECTTTCCHHHHHHHHHTT---------T-------------CEEEE-CSSTTEEEE
T ss_pred CeEEEEeCCCCCHHHHHHHHHHC---------C-------------CeecC-CCCCceEEE
Confidence 47899999999999998887643 3 33344 778888887
No 328
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=90.94 E-value=1.5 Score=47.64 Aligned_cols=46 Identities=17% Similarity=0.117 Sum_probs=36.0
Q ss_pred CCCCeEEEecCCCChhHHHHHhccCC----CcEEEEEcCChHHHHHHHHH
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLRD----EGEVVAVDRSHNKVMDIQKL 305 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~~----~g~V~A~D~s~~rl~~l~~~ 305 (422)
+.--+|+|++||.||.++-+.+.... --.++|+|+++..++..+.|
T Consensus 210 ~k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~N 259 (784)
T 4ft4_B 210 TRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYN 259 (784)
T ss_dssp CEEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHH
T ss_pred CCCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHH
Confidence 34457999999999999988765210 02688999999999999887
No 329
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=90.92 E-value=0.75 Score=51.86 Aligned_cols=91 Identities=9% Similarity=-0.014 Sum_probs=60.0
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhh----ccCCCCCCcc
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVR----RKNESNDEPN 336 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~----~~~~~~~~~~ 336 (422)
..-+++|+|||.||.+.-+.+. +-.-.|.|+|+++..++..+.| .++..++..|...+.. .+......
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~~ty~~N-----~p~~~~~~~DI~~l~~~~~~~di~~~~~-- 610 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAAQAFRLN-----NPGSTVFTEDCNILLKLVMAGETTNSRG-- 610 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHHHHHHHH-----CTTSEEECSCHHHHHHHHHHTCSBCTTC--
T ss_pred CCCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHh-----CCCCccccccHHHHhhhccchhhhhhhh--
Confidence 3457999999999999988765 1112588999999999988877 3456677788765421 11000000
Q ss_pred ccCCCCCCCCCceeecCCccccCc
Q 014571 337 MCNSKDNNYITSQTSDSMKLHKEV 360 (422)
Q Consensus 337 ~~~~~~~~~FD~VLvDaPCSg~G~ 360 (422)
......+.+|.|+.-+||.+--.
T Consensus 611 -~~lp~~~~vDll~GGpPCQ~FS~ 633 (1002)
T 3swr_A 611 -QRLPQKGDVEMLCGGPPCQGFSG 633 (1002)
T ss_dssp -CBCCCTTTCSEEEECCCCTTCCS
T ss_pred -hhcccCCCeeEEEEcCCCcchhh
Confidence 00011346899999999988544
No 330
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=88.69 E-value=0.42 Score=46.75 Aligned_cols=49 Identities=18% Similarity=0.239 Sum_probs=36.7
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCCh---HHHHHHHHHHHHhC
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSH---NKVMDIQKLAAEMG 310 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~---~rl~~l~~~l~r~g 310 (422)
-.+|+.|||-+||.|. |.+.|..++ -+-+++|+++ .-++.+++++++.|
T Consensus 240 ~~~~~~vlDpF~GsGt-t~~aa~~~~--r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGV-TARVAIQEG--RNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp SCTTCEEEETTCTTCH-HHHHHHHHT--CEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCEEEecCCCCCH-HHHHHHHcC--CcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 4689999999999997 344444443 5799999999 99999999988876
No 331
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=88.11 E-value=0.35 Score=47.21 Aligned_cols=63 Identities=6% Similarity=-0.009 Sum_probs=49.2
Q ss_pred CCCCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhh
Q 014571 259 PQKGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325 (422)
Q Consensus 259 p~pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 325 (422)
-.+|+.|||-+||.|. |.+.|..++ -+.+++|+++.-++.+++++++.+.. ...++.|+++..
T Consensus 250 ~~~~~~VlDpF~GsGt-t~~aa~~~g--r~~ig~e~~~~~~~~~~~r~~~~~~~-~~~~~~~~~~i~ 312 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNT-TGLVAERES--RKWISFEMKPEYVAASAFRFLDNNIS-EEKITDIYNRIL 312 (323)
T ss_dssp CCTTCEEEETTCTTCH-HHHHHHHTT--CEEEEEESCHHHHHHHHGGGSCSCSC-HHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCH-HHHHHHHcC--CCEEEEeCCHHHHHHHHHHHHhcccc-hHHHHHHHHHHH
Confidence 4789999999999997 444555543 58999999999999999998887753 455566777654
No 332
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=87.62 E-value=0.4 Score=48.64 Aligned_cols=45 Identities=11% Similarity=0.187 Sum_probs=35.3
Q ss_pred CeEEEecCCCChhHHHHHhccCCCcE----EEEEcCChHHHHHHHHHHH
Q 014571 263 ERILDMCAAPGGKTTAIASLLRDEGE----VVAVDRSHNKVMDIQKLAA 307 (422)
Q Consensus 263 ~~VLD~CAgpGgKT~~la~l~~~~g~----V~A~D~s~~rl~~l~~~l~ 307 (422)
-+|+|+|||.||-+..+-+.-.+--. |.|+|+++..++..+.|..
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 48999999999999888765110113 8899999999999888764
No 333
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=87.52 E-value=1.2 Score=51.50 Aligned_cols=93 Identities=10% Similarity=-0.015 Sum_probs=59.7
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccC--CCCCCcccc
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKN--ESNDEPNMC 338 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~--~~~~~~~~~ 338 (422)
..-+++|+|||.||.+.-+.+. +-.-.|.|+|+++..++..+.|. ++..++..|...+..... ....... .
T Consensus 850 ~~l~viDLFsG~GGlslGfe~A-G~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~gdi~~~~~-~ 922 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQA-GISETLWAIEMWDPAAQAFRLNN-----PGTTVFTEDCNVLLKLVMAGEVTNSLG-Q 922 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHT-TSEEEEEEECCSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHTTTCSBCSSC-C
T ss_pred CCceEEecccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhC-----CCCcEeeccHHHHhHhhhccchhhhhh-h
Confidence 4568999999999999988765 11125889999999999988872 445677777765432100 0000000 0
Q ss_pred CCCCCCCCCceeecCCccccCc
Q 014571 339 NSKDNNYITSQTSDSMKLHKEV 360 (422)
Q Consensus 339 ~~~~~~~FD~VLvDaPCSg~G~ 360 (422)
.....+.+|.|+--+||-+--.
T Consensus 923 ~lp~~~~vDvl~GGpPCQ~FS~ 944 (1330)
T 3av4_A 923 RLPQKGDVEMLCGGPPCQGFSG 944 (1330)
T ss_dssp BCCCTTTCSEEEECCCCTTTCS
T ss_pred hccccCccceEEecCCCccccc
Confidence 0011246899999999988543
No 334
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=85.15 E-value=1 Score=44.77 Aligned_cols=52 Identities=21% Similarity=0.278 Sum_probs=41.0
Q ss_pred HhcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCC
Q 014571 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGL 311 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~ 311 (422)
...++++|++||-.+||+ |.-+.++|..++ ..+|+++|.++.|++.++ ++|.
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa 231 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLLS----DAGF 231 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----TTTC
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCC
Confidence 456789999999998876 667778887764 248999999999987654 4676
No 335
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=83.63 E-value=2.3 Score=41.00 Aligned_cols=53 Identities=19% Similarity=0.198 Sum_probs=41.8
Q ss_pred HhcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
....+++|++||-.+||+ |.-+.++|..++ .+|+++|.++.|++.++ ++|.+.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~ 213 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLNLAR----RLGAEV 213 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HTTCSE
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHH----HcCCCE
Confidence 455789999999988876 777778888764 49999999999988654 578653
No 336
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=82.95 E-value=0.3 Score=49.48 Aligned_cols=57 Identities=12% Similarity=0.076 Sum_probs=44.2
Q ss_pred ccCCCCchhhhhhhcccCC-CCCCCcccCCCceEEEEccCccCHHHHhc--ccCcceeec
Q 014571 169 PTLDGGWGLGITRGTVLQG-SQTDPYYFERSGLYIGQGTAMMSRAGIFR--ASEGIAVDM 225 (422)
Q Consensus 169 ~~~~p~W~~~~~r~~~~~~-~~~~~~~~~~~~v~Vrvg~a~msreel~~--~~~GiaV~~ 225 (422)
++++|.|+++.++..+... ..+..++++++++++|+|+.+++++++.+ ...|+.++.
T Consensus 142 ~~~~p~w~~~~~~~~~g~~~~~~~~~~~~~~~~~~Rvn~~~~~~~~~~~~l~~~g~~~~~ 201 (429)
T 1sqg_A 142 RYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFP 201 (429)
T ss_dssp GGCSCHHHHHHHHHHCTTTHHHHHHHHTSCCCEEEEECTTTCCHHHHHHHHHHTTCCEEC
T ss_pred hhcCcHHHHHHHHHHhhHHHHHHHHhCCCCCCeEEEEcCCCCCHHHHHHHHHhCCCceee
Confidence 6899999999988876521 23556778899999999999999998876 346766553
No 337
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=81.82 E-value=2.2 Score=42.16 Aligned_cols=53 Identities=21% Similarity=0.248 Sum_probs=40.3
Q ss_pred HhcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
..+.+++|++||-.+||+ |.-+.++|..++ ..+|+++|.++.|++.++ ++|.+
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~----~lGa~ 232 (398)
T 1kol_A 179 VTAGVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAHAK----AQGFE 232 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCE
T ss_pred HHcCCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHH----HcCCc
Confidence 345789999999988765 556677777764 237999999999988774 47874
No 338
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=80.52 E-value=2.4 Score=41.23 Aligned_cols=54 Identities=24% Similarity=0.305 Sum_probs=40.4
Q ss_pred HhcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
....+++|++||-.+||+ |.-+.++|..++ ..+|+++|.++.|++.++ ++|.+.
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 219 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSATRLSKAK----EIGADL 219 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HhCCCE
Confidence 456789999999998765 555667777653 238999999999987664 578753
No 339
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=80.18 E-value=0.27 Score=50.16 Aligned_cols=60 Identities=13% Similarity=0.099 Sum_probs=45.8
Q ss_pred cccccCCCCchhhhhhhcccCC-CCCCCccc-CCCceEEEEccCccCHHHHhc--ccCcceeec
Q 014571 166 VEQPTLDGGWGLGITRGTVLQG-SQTDPYYF-ERSGLYIGQGTAMMSRAGIFR--ASEGIAVDM 225 (422)
Q Consensus 166 l~~~~~~p~W~~~~~r~~~~~~-~~~~~~~~-~~~~v~Vrvg~a~msreel~~--~~~GiaV~~ 225 (422)
+.-.+++|.|+++.++..+... ..+.++++ +++++++|+|+.+.+++++.+ ...|+.++.
T Consensus 151 ~~~~~~~P~w~~~~~~~~~g~~~~~~~~a~~~~~~~~~~Rvn~~k~~~~~~~~~L~~~g~~~~~ 214 (450)
T 2yxl_A 151 LEWKYLAPSWLIERVKGILGDETEDFFRSVNKRHEWISIRVNTLKANVEEVIGELEEDGVEVVR 214 (450)
T ss_dssp HHHHHTSCHHHHHHHHHHHGGGHHHHHHHHHCCCCEEEEEECTTTCCHHHHHHHHHHTTCCEEE
T ss_pred hhhHhcCcHHHHHHHHHHhhHHHHHHHHhcCCCCCCEEEEEcCCCCCHHHHHHHHHhCCcccee
Confidence 4446899999999888776511 23556788 899999999999999998876 356776553
No 340
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=79.40 E-value=2.6 Score=41.20 Aligned_cols=54 Identities=17% Similarity=0.192 Sum_probs=40.2
Q ss_pred HhcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
...++++|++||-.+||+ |--+.++|..++ ..+|+++|.++.|++.++ ++|.+.
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 238 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAK----QLGATH 238 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----HHTCSE
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCCE
Confidence 345789999999998765 556677777653 237999999999988764 467643
No 341
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=77.17 E-value=3.5 Score=40.00 Aligned_cols=54 Identities=22% Similarity=0.212 Sum_probs=40.1
Q ss_pred HHhcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 254 AHALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 254 ~~~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
.....+++|++||=.+||+ |.-+.++|..++ ..+|+++|.+++|++.++ ++|.+
T Consensus 159 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~ 213 (352)
T 3fpc_A 159 AELANIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCCDIAL----EYGAT 213 (352)
T ss_dssp HHHTTCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHHHHHH----HHTCC
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHHHHHH----HhCCc
Confidence 3566789999999987655 555666776653 237999999999987665 47865
No 342
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=77.12 E-value=3.2 Score=40.77 Aligned_cols=51 Identities=18% Similarity=0.184 Sum_probs=39.2
Q ss_pred cCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 257 LDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 257 L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
+.+++|++||-.+||+ |.-+.++|..++ .+|+++|.++.|++.++ ++|...
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~Vi~~~~~~~~~~~a~----~lGa~~ 241 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAMG--AHVVAFTTSEAKREAAK----ALGADE 241 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHH----HHTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----HcCCcE
Confidence 4789999999998765 555667777653 47999999999988765 478653
No 343
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=76.51 E-value=3.4 Score=40.04 Aligned_cols=52 Identities=23% Similarity=0.229 Sum_probs=39.3
Q ss_pred HhcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
...++++|++||-.+||+ |.-+.++|..++ .+|+++|.++.|++.++ .+|.+
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~ 214 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLEVAK----NCGAD 214 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HTTCS
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHHHHH----HhCCC
Confidence 456789999999988754 445666676654 46999999999988764 57875
No 344
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=76.43 E-value=3.2 Score=40.21 Aligned_cols=54 Identities=22% Similarity=0.226 Sum_probs=40.9
Q ss_pred HhcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcce
Q 014571 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv 314 (422)
....+++|++||=.+||+ |.-+.++|..++ .+|+++|.++.|++.++ ++|.+.+
T Consensus 170 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~v 224 (348)
T 3two_A 170 KFSKVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDAL----SMGVKHF 224 (348)
T ss_dssp HHTTCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHHH----HTTCSEE
T ss_pred HhcCCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHH----hcCCCee
Confidence 345789999999987765 555667777664 58999999999988664 5787643
No 345
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=76.21 E-value=3.9 Score=39.29 Aligned_cols=54 Identities=19% Similarity=0.168 Sum_probs=38.8
Q ss_pred HhcCCCCCCeEEEecCCCCh-hHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 255 HALDPQKGERILDMCAAPGG-KTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgpGg-KT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
....+++|++||=.+||++| .+.+++..++ ..+|+++|.+++|++.+ +++|...
T Consensus 157 ~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~----~~~Ga~~ 211 (348)
T 4eez_A 157 KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLA----KKIGADV 211 (348)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHH----HHTTCSE
T ss_pred cccCCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhh----hhcCCeE
Confidence 44578999999999888754 4444455443 47999999999997654 4577653
No 346
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=74.43 E-value=4.3 Score=39.12 Aligned_cols=51 Identities=18% Similarity=0.210 Sum_probs=39.5
Q ss_pred CCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 258 DPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 258 ~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
.+++|++||=.+||+ |.-+.++|..++ ..+|+++|.++.|++.++ ++|.+.
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~----~lGa~~ 219 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALAR----EVGADA 219 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHH----HTTCSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCCCE
Confidence 678999999988765 556667777663 369999999999988764 578754
No 347
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=72.91 E-value=4.4 Score=39.62 Aligned_cols=54 Identities=13% Similarity=0.092 Sum_probs=39.3
Q ss_pred HhcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
...++++|++||-.+||+ |.-+.++|..++ ..+|+++|.++.|++.++ ++|.+.
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~ 240 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPDKFEKAK----VFGATD 240 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTCCE
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HhCCce
Confidence 345788999999987654 445666676653 238999999999988764 578753
No 348
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=72.90 E-value=6.8 Score=36.50 Aligned_cols=62 Identities=18% Similarity=0.231 Sum_probs=48.6
Q ss_pred CCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
|.+|| +..|.||...+++..+ ....+|+++++++.+++.+.+.++..|..++.++..|.+..
T Consensus 28 ~k~vl-ITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 90 (286)
T 1xu9_A 28 GKKVI-VTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM 90 (286)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCH
Confidence 56676 6677888888887754 23468999999999999888888877766788888998753
No 349
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=72.14 E-value=4.9 Score=39.03 Aligned_cols=50 Identities=18% Similarity=0.162 Sum_probs=37.5
Q ss_pred HhcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHH
Q 014571 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKL 305 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~ 305 (422)
....+++|++||=.+||+ |.-+.++|..++ ...|++.|.++.|++.+++.
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAG-ACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEEESCHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHh
Confidence 456789999999887654 555667777653 22499999999999887763
No 350
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=72.13 E-value=4.7 Score=39.40 Aligned_cols=54 Identities=13% Similarity=0.129 Sum_probs=39.3
Q ss_pred HhcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
...++++|++||-.+||+ |.-+.++|..++ ..+|+++|.++.|++.++ ++|.+.
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~ 239 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKDKFAKAK----EVGATE 239 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HhCCce
Confidence 345788999999998654 445666676653 238999999999987764 578753
No 351
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=71.24 E-value=5.9 Score=38.16 Aligned_cols=51 Identities=16% Similarity=0.048 Sum_probs=37.8
Q ss_pred CCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 258 DPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 258 ~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
++ +|++||-.+||+ |.-+.++|..+.+..+|+++|.++.|++.++ ++|.+.
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~ 219 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFAL----ELGADY 219 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH----HHTCSE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH----HhCCCE
Confidence 77 999999998864 4556677776611258999999999987765 467653
No 352
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=71.04 E-value=4.6 Score=39.47 Aligned_cols=54 Identities=11% Similarity=0.081 Sum_probs=39.3
Q ss_pred HhcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
....+++|++||=.+||+ |.-+.++|..++ ..+|+++|.++.|++.++ ++|.+.
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 239 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKAI----ELGATE 239 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCcE
Confidence 345788999999998654 445566666653 238999999999987764 578753
No 353
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=70.94 E-value=7.2 Score=38.19 Aligned_cols=54 Identities=19% Similarity=0.156 Sum_probs=40.2
Q ss_pred HhcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
....+++|++||=.+||+ |.-+.++|..++ ..+|+++|.++.|.+.++ ++|.+.
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 230 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRRLAE----EVGATA 230 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHH----HHTCSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HcCCCE
Confidence 556789999999987755 555666777653 238999999999987655 478753
No 354
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=70.91 E-value=5.4 Score=39.00 Aligned_cols=54 Identities=11% Similarity=0.104 Sum_probs=39.0
Q ss_pred HhcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
....+++|++||=.+||+ |.-+.++|..++ ..+|+++|.++.|++.++ ++|.+.
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 243 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKFPKAK----ALGATD 243 (376)
T ss_dssp TTSCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HhCCcE
Confidence 345788999999998654 445566666653 238999999999987654 578753
No 355
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=70.73 E-value=4.9 Score=39.15 Aligned_cols=54 Identities=13% Similarity=0.129 Sum_probs=39.1
Q ss_pred HhcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
...++++|++||-.+||+ |.-+.++|..++ ..+|+++|.++.|++.++ ++|.+.
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~ 238 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFARAK----EFGATE 238 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHH----HHTCSE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCce
Confidence 345789999999988654 445566666653 237999999999988765 478753
No 356
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=68.60 E-value=4.5 Score=38.43 Aligned_cols=80 Identities=19% Similarity=0.301 Sum_probs=48.5
Q ss_pred EEeChhHHHHHHhcCCC--------CCCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcce
Q 014571 244 FLQNLPSIVTAHALDPQ--------KGERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCI 314 (422)
Q Consensus 244 ~~Qd~~S~lv~~~L~p~--------pg~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv 314 (422)
..||..+|+......|. .|.+|| +..|.||...++++.+ ....+|+.+|++..+++.+.+.++..|..++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~m~~l~~k~vl-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~ 93 (293)
T 3rih_A 15 QTQGPGSMLVVESAEPAERKVMFDLSARSVL-VTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNV 93 (293)
T ss_dssp -------------------CCTTCCTTCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCE
T ss_pred hhcCCceeeeecCCCCcccccccCCCCCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcE
Confidence 45777777766444432 344555 6777888888888765 3345899999999999888888877765678
Q ss_pred EEEecchhhh
Q 014571 315 TTYKLDALKA 324 (422)
Q Consensus 315 ~~~~~Da~~~ 324 (422)
.++..|.+..
T Consensus 94 ~~~~~Dv~d~ 103 (293)
T 3rih_A 94 IGVRLDVSDP 103 (293)
T ss_dssp EEEECCTTCH
T ss_pred EEEEEeCCCH
Confidence 8999998764
No 357
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=68.45 E-value=5.2 Score=38.92 Aligned_cols=52 Identities=23% Similarity=0.220 Sum_probs=38.8
Q ss_pred hcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 256 ~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
.+++++|++||-.+||+ |.-+.++|..++ .+|+++|.++.|++.+++ +|...
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~~~~~~~~----lGa~~ 226 (360)
T 1piw_A 174 RNGCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSRKREDAMK----MGADH 226 (360)
T ss_dssp HTTCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTCSE
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH----cCCCE
Confidence 35789999999998854 445666666653 479999999999877653 77653
No 358
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=67.99 E-value=6.4 Score=38.35 Aligned_cols=52 Identities=17% Similarity=0.134 Sum_probs=39.5
Q ss_pred hcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 256 ~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
...+++|++||=.++|+ |.-+.++|..++ .+|+++|.++.|++.++ ++|.+.
T Consensus 184 ~~~~~~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~ 236 (363)
T 3uog_A 184 KGHLRAGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDRAF----ALGADH 236 (363)
T ss_dssp TTCCCTTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HHTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHHHH----HcCCCE
Confidence 45688999999988665 555667777654 58999999999988754 578753
No 359
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=67.82 E-value=11 Score=36.14 Aligned_cols=51 Identities=24% Similarity=0.225 Sum_probs=38.3
Q ss_pred hcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 256 ~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
...+++|++||-.+||+ |.-+.++|..++ .+|+++|.++.|++.++ ++|..
T Consensus 159 ~~~~~~g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~lGa~ 210 (339)
T 1rjw_A 159 VTGAKPGEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGDEKLELAK----ELGAD 210 (339)
T ss_dssp HHTCCTTCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHH----HTTCS
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH----HCCCC
Confidence 34789999999998854 445566666653 59999999999988764 47764
No 360
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=67.31 E-value=4.5 Score=39.61 Aligned_cols=54 Identities=11% Similarity=0.158 Sum_probs=39.5
Q ss_pred HhcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
....+++|++||=.+||+ |--+.++|..++ ..+|+++|.++.|++.++ ++|.+.
T Consensus 187 ~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 241 (378)
T 3uko_A 187 NTAKVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETAK----KFGVNE 241 (378)
T ss_dssp TTTCCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHHH----TTTCCE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HcCCcE
Confidence 446788999999987754 555666666653 238999999999988654 578754
No 361
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=65.81 E-value=10 Score=36.34 Aligned_cols=57 Identities=19% Similarity=0.148 Sum_probs=40.4
Q ss_pred HHHHhcCCCCCCeEEEecCCCCh-hHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 252 VTAHALDPQKGERILDMCAAPGG-KTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGg-KT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
.......+++|++||=.+||+.| -+.++|..++ ...|+++|.+++|++.++ ++|...
T Consensus 151 ~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a~----~lGa~~ 208 (346)
T 4a2c_A 151 HAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALAK----SFGAMQ 208 (346)
T ss_dssp HHHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred HHHHHhccCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHHH----HcCCeE
Confidence 34456678999999988876644 3445566654 357899999999987654 578653
No 362
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=63.05 E-value=6.3 Score=37.92 Aligned_cols=52 Identities=17% Similarity=0.328 Sum_probs=40.4
Q ss_pred HhcCCCCCCeEEEecCC--CChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 255 HALDPQKGERILDMCAA--PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAg--pGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
....+++|++||=.+|| -|.-+.++|..++ .+|+++|.++.+++.+++ +|..
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----lga~ 191 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQILN--FRLIAVTRNNKHTEELLR----LGAA 191 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTCS
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----CCCc
Confidence 45688999999998776 4666777777654 589999999999887764 6765
No 363
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=59.41 E-value=8 Score=36.68 Aligned_cols=52 Identities=12% Similarity=-0.008 Sum_probs=38.6
Q ss_pred HhcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
....+++|++||=.+||+ |.-+.++|..++ .+|++++ ++.|++.++ ++|.+.
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~~~~~~~~----~lGa~~ 188 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-ASLSQALAA----KRGVRH 188 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SSCCHHHHH----HHTEEE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-ChhhHHHHH----HcCCCE
Confidence 456788999999888754 555667777664 4999999 998887765 477643
No 364
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=59.13 E-value=18 Score=32.63 Aligned_cols=62 Identities=19% Similarity=0.060 Sum_probs=47.5
Q ss_pred CCCeEEEecCCCChhHHHHHhccC--CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR--DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~--~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.+.+|| +..|.||...+++..+. ...+|+.++++..+++.+.+.++..| .++.++.+|.+..
T Consensus 3 ~~k~vl-ITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~ 66 (276)
T 1wma_A 3 GIHVAL-VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-LSPRFHQLDIDDL 66 (276)
T ss_dssp CCCEEE-ESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTCH
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC-CeeEEEECCCCCH
Confidence 355666 77788999998887653 34689999999999988888887766 3578888887754
No 365
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=58.81 E-value=12 Score=36.95 Aligned_cols=50 Identities=18% Similarity=0.253 Sum_probs=36.7
Q ss_pred CCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 258 DPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 258 ~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
.+++|++||=.+||+ |.-+.++|..++ ..+|+++|.++.|++.++ ++|.+
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~----~lGa~ 260 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSEVRRNLAK----ELGAD 260 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHH----HHTCS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HcCCC
Confidence 578999999887644 444556666653 248999999999988765 57865
No 366
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=57.87 E-value=13 Score=36.38 Aligned_cols=54 Identities=22% Similarity=0.262 Sum_probs=38.9
Q ss_pred HhcC-CCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 255 HALD-PQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 255 ~~L~-p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
..++ +++|++||-.+||+ |.-+.++|..++ ..+|+++|.++.|++.++ ++|.+.
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~----~lGa~~ 243 (380)
T 1vj0_A 188 DEYPESFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAE----EIGADL 243 (380)
T ss_dssp HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHH----HcCCcE
Confidence 3456 88999999998554 444556666642 248999999999987765 578753
No 367
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=57.40 E-value=25 Score=31.50 Aligned_cols=60 Identities=22% Similarity=0.254 Sum_probs=46.6
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecch
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da 321 (422)
.|.+|| +..|.||...+++..+. ...+|+.+|++..+++.+.+.++..+..++.++..|.
T Consensus 13 ~~k~vl-ITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~ 73 (247)
T 3i1j_A 13 KGRVIL-VTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNL 73 (247)
T ss_dssp TTCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCT
T ss_pred CCCEEE-EeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEecc
Confidence 355666 66777888888887653 3468999999999999999999888766677777765
No 368
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=56.46 E-value=16 Score=34.96 Aligned_cols=50 Identities=26% Similarity=0.375 Sum_probs=37.8
Q ss_pred cCCCCCCeEEEecC--CCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 257 LDPQKGERILDMCA--APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 257 L~p~pg~~VLD~CA--gpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
.++++|++||-.+| |-|.-+.+++..++ .+|+++|.++.+++.++ ++|..
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~----~~ga~ 213 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFG--ARVIATAGSEDKLRRAK----ALGAD 213 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HHTCS
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----hcCCC
Confidence 46789999999887 44555666666653 58999999999988775 36764
No 369
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=55.94 E-value=41 Score=31.22 Aligned_cols=62 Identities=24% Similarity=0.174 Sum_probs=44.5
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEE-ecchhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTY-KLDALK 323 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~-~~Da~~ 323 (422)
.|.+|| +..|.|+...+++..+. ...+|++++++..+.+.+.+.++...-.++.++ .+|.+.
T Consensus 10 ~~~~vl-VTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d 73 (342)
T 1y1p_A 10 EGSLVL-VTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK 73 (342)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTS
T ss_pred CCCEEE-EECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcC
Confidence 466777 66778999999887553 235899999999888777665544322467877 788765
No 370
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=55.65 E-value=18 Score=34.76 Aligned_cols=53 Identities=17% Similarity=0.212 Sum_probs=37.4
Q ss_pred HhcCCCCCCeEEEecCC--CChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 255 HALDPQKGERILDMCAA--PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAg--pGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
....+++|++||-.+|| -|.-+.+++..+. ..+|+++|.++.+++.++ ++|..
T Consensus 164 ~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~~~~~~~~~~~----~~g~~ 218 (347)
T 1jvb_A 164 RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVEAAK----RAGAD 218 (347)
T ss_dssp HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHHHHH----HHTCS
T ss_pred HhcCCCCCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHH----HhCCC
Confidence 33578899999999886 3344555555541 258999999999987764 35754
No 371
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=55.64 E-value=13 Score=35.78 Aligned_cols=52 Identities=21% Similarity=0.132 Sum_probs=36.4
Q ss_pred HhcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 255 HALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
...++ +|++||-.+||+ |.-+.++|..++ ..+|+++|.++.|++.++ ++|..
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~~~~~~----~~Ga~ 214 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKASG-AYPVIVSEPSDFRRELAK----KVGAD 214 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHHHHHHH----HHTCS
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHH----HhCCC
Confidence 34467 999999988743 444556666543 238999999999887665 46764
No 372
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=54.88 E-value=24 Score=32.54 Aligned_cols=63 Identities=16% Similarity=0.071 Sum_probs=49.4
Q ss_pred CCCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.+.+|| +..|.||...+++..+ ....+|+.++++..+++.+.+.++..+-.++.++..|.+..
T Consensus 11 ~~k~vl-ITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~ 74 (311)
T 3o26_A 11 KRRCAV-VTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDP 74 (311)
T ss_dssp -CCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSC
T ss_pred CCcEEE-EecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCc
Confidence 355566 6777888888888765 33469999999999999888888877766799999998764
No 373
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=54.52 E-value=19 Score=34.89 Aligned_cols=52 Identities=13% Similarity=0.177 Sum_probs=37.0
Q ss_pred cCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 257 LDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 257 L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
.++++|++||=.+||+ |.-+.++|..+. ..+|+++|.++.|++.++ ++|.+.
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~-Ga~Vi~~~~~~~~~~~~~----~lGa~~ 234 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMT-PATVIALDVKEEKLKLAE----RLGADH 234 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESSHHHHHHHH----HTTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEeCCHHHHHHHH----HhCCCE
Confidence 6789999999888742 223445555551 248999999999987765 578653
No 374
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=53.52 E-value=11 Score=32.74 Aligned_cols=50 Identities=24% Similarity=0.348 Sum_probs=33.5
Q ss_pred hcCCCCCCeEEEecCCCChhH---HHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 256 ALDPQKGERILDMCAAPGGKT---TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 256 ~L~p~pg~~VLD~CAgpGgKT---~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
..++++|++||..+|+ ||.. .+++... ..+|+++|.++.+++.++ .+|..
T Consensus 33 ~~~~~~g~~vlV~Ga~-ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~----~~g~~ 85 (198)
T 1pqw_A 33 VGRLSPGERVLIHSAT-GGVGMAAVSIAKMI--GARIYTTAGSDAKREMLS----RLGVE 85 (198)
T ss_dssp TSCCCTTCEEEETTTT-SHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHH----TTCCS
T ss_pred HhCCCCCCEEEEeeCC-ChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----HcCCC
Confidence 3568899999987643 4433 3444433 358999999998887654 35654
No 375
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=53.14 E-value=27 Score=31.68 Aligned_cols=62 Identities=21% Similarity=0.135 Sum_probs=46.7
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcC-ChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~-s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...+++..+. ...+|+++++ +..+++.+.+.++..|. ++.++.+|.+..
T Consensus 20 ~~k~vl-ItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~ 83 (274)
T 1ja9_A 20 AGKVAL-TTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKP 83 (274)
T ss_dssp TTCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSH
T ss_pred CCCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCCH
Confidence 356677 77788999888887653 3358999999 88888888777777663 577888887754
No 376
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=52.81 E-value=16 Score=35.16 Aligned_cols=51 Identities=18% Similarity=0.152 Sum_probs=35.8
Q ss_pred hcCCCCCCeEEEecCC--CChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 256 ALDPQKGERILDMCAA--PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 256 ~L~p~pg~~VLD~CAg--pGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
.+.+++|++||-.+|+ -|.-+.+++... ..+|+++|.++.+++.++ ++|..
T Consensus 164 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~----~~g~~ 216 (347)
T 2hcy_A 164 SANLMAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFR----SIGGE 216 (347)
T ss_dssp TTTCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHH----HTTCC
T ss_pred hcCCCCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHH----HcCCc
Confidence 3478899999999872 344455555554 358999999998886554 46754
No 377
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=52.55 E-value=34 Score=30.70 Aligned_cols=62 Identities=10% Similarity=0.070 Sum_probs=46.6
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.+.+|| +..|.||...+++..+. ...+|+++|++..+++.+.+.++..+. ++.++..|.+..
T Consensus 12 ~~k~vl-ItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~ 74 (260)
T 3awd_A 12 DNRVAI-VTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH-DVSSVVMDVTNT 74 (260)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCH
T ss_pred CCCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCH
Confidence 355666 66778888888887553 346899999999998888777776653 588888888754
No 378
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=51.48 E-value=9.6 Score=36.16 Aligned_cols=76 Identities=8% Similarity=-0.138 Sum_probs=40.7
Q ss_pred CcceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHH
Q 014571 311 LKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEE 390 (422)
Q Consensus 311 ~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~ 390 (422)
+..++++++|+....... ..++||.|+.|||--.... ....+... .. ..........-.+
T Consensus 19 ~~~~~i~~gD~~~~l~~l-------------~~~s~DlIvtdPPY~~~~~---y~~~~~~~---~~-~~~~~~~l~~l~~ 78 (297)
T 2zig_A 19 FGVHRLHVGDAREVLASF-------------PEASVHLVVTSPPYWTLKR---YEDTPGQL---GH-IEDYEAFLDELDR 78 (297)
T ss_dssp --CEEEEESCHHHHHTTS-------------CTTCEEEEEECCCCCCCC----------CC---HH-HHHHHHHHHHHHH
T ss_pred ccCCEEEECcHHHHHhhC-------------CCCceeEEEECCCCCCccc---cCCChhhh---cc-cccHHHHHHHHHH
Confidence 346889999998854211 1357999999999865433 22222211 00 0000112223346
Q ss_pred HHHHhcc-ceeccEEEe
Q 014571 391 INALVVG-LRIQKVLVL 406 (422)
Q Consensus 391 IL~~a~~-lr~~~~~~~ 406 (422)
+++.+.. |+.+|.+++
T Consensus 79 ~~~~~~rvLk~~G~l~i 95 (297)
T 2zig_A 79 VWREVFRLLVPGGRLVI 95 (297)
T ss_dssp HHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEE
Confidence 6776655 789998876
No 379
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=51.33 E-value=9 Score=36.83 Aligned_cols=47 Identities=15% Similarity=0.196 Sum_probs=34.2
Q ss_pred hcCCCCCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHH
Q 014571 256 ALDPQKGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQK 304 (422)
Q Consensus 256 ~L~p~pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~ 304 (422)
..++ +|++||-.+||+ |.-+.++|..++ ..+|+++|.++.|++.+++
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~~~~~~~~ 207 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASG-AGPILVSDPNPYRLAFARP 207 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHHHHGGGTT
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH
Confidence 5567 999999998844 444556666553 2379999999999876654
No 380
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=50.87 E-value=29 Score=32.60 Aligned_cols=62 Identities=15% Similarity=0.112 Sum_probs=47.9
Q ss_pred CCCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...+++..+ ....+|+.+|++..+++.+.+.++..|. ++.++..|.+..
T Consensus 30 ~gk~vl-VTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~ 92 (301)
T 3tjr_A 30 DGRAAV-VTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRHL 92 (301)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCH
T ss_pred CCCEEE-EeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCCH
Confidence 566777 5666788888888765 3346899999999999999888887764 578888888764
No 381
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=50.72 E-value=17 Score=34.68 Aligned_cols=53 Identities=26% Similarity=0.323 Sum_probs=37.0
Q ss_pred HhcCCCCCCeEEEecC--CCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 255 HALDPQKGERILDMCA--APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CA--gpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
....+++|++||-.+| |-|.-+.+++...+ .+|+++|.++.+++.+. +++|..
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~---~~~g~~ 197 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKG--CRVVGIAGGAEKCRFLV---EELGFD 197 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH---HTTCCS
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH---HHcCCC
Confidence 4567899999997766 23444555555543 49999999999887763 346764
No 382
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=50.52 E-value=22 Score=29.61 Aligned_cols=86 Identities=15% Similarity=0.041 Sum_probs=44.0
Q ss_pred CCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCCCCCCCCce
Q 014571 270 AAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQ 349 (422)
Q Consensus 270 AgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~V 349 (422)
.|+++-+......+...-+|.-+|-++...+.+++.+++.|...+.....|+........ ...||.|
T Consensus 9 ~~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~-------------~~~~dlv 75 (164)
T 3t8y_A 9 HHSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQPDMKVVGFAKDGLEAVEKAI-------------ELKPDVI 75 (164)
T ss_dssp ---------------CCEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHH-------------HHCCSEE
T ss_pred cccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHhc-------------cCCCCEE
Confidence 355666666666555557899999999999999999988753222223445544332110 2347999
Q ss_pred eecCCcccc---CchhhhhhCC
Q 014571 350 TSDSMKLHK---EVPSIAAEGL 368 (422)
Q Consensus 350 LvDaPCSg~---G~l~~lrr~p 368 (422)
|+|.--.+. ..+..+|+..
T Consensus 76 ilD~~l~~~~g~~l~~~lr~~~ 97 (164)
T 3t8y_A 76 TMDIEMPNLNGIEALKLIMKKA 97 (164)
T ss_dssp EECSSCSSSCHHHHHHHHHHHS
T ss_pred EEeCCCCCCCHHHHHHHHHhcC
Confidence 999754442 2334455543
No 383
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=50.30 E-value=25 Score=32.35 Aligned_cols=64 Identities=16% Similarity=0.193 Sum_probs=47.0
Q ss_pred CCCeEEEecCCCC-hhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPG-GKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpG-gKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.++|=-+|+.+ |....+|..+ ....+|+.+|+++..++.+.+.++..+-.++.++..|.++.
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 70 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSD 70 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCH
Confidence 4667776665432 5555555543 23569999999999999999998888876788889998764
No 384
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=50.04 E-value=22 Score=31.87 Aligned_cols=62 Identities=19% Similarity=0.214 Sum_probs=46.5
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCC-hHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRS-HNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s-~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...+++..+. ...+|++++++ +.+++.+.+.++..+ .++.++.+|.++.
T Consensus 6 ~~k~vl-VTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~ 69 (258)
T 3afn_B 6 KGKRVL-ITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG-GDAAFFAADLATS 69 (258)
T ss_dssp TTCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT-CEEEEEECCTTSH
T ss_pred CCCEEE-EeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC-CceEEEECCCCCH
Confidence 355666 67778998888887653 34589999998 888888777776665 3588888898764
No 385
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=49.69 E-value=33 Score=33.72 Aligned_cols=62 Identities=18% Similarity=0.178 Sum_probs=47.8
Q ss_pred CCeEEEecCCCChhHHHHHhccCCCc--EEEEEcCChHHHHHHHHHHHHhCC---cceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLRDEG--EVVAVDRSHNKVMDIQKLAAEMGL---KCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~~~g--~V~A~D~s~~rl~~l~~~l~r~g~---~nv~~~~~Da~~~ 324 (422)
|.+|| +..|+|+-..++++.+...| .|+++|+++.++..+.+.+..... .++.++.+|.+..
T Consensus 35 ~k~vL-VTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~ 101 (399)
T 3nzo_A 35 QSRFL-VLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSI 101 (399)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSH
T ss_pred CCEEE-EEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCH
Confidence 56776 66778999999988764444 899999999999888777765421 4688999998764
No 386
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=49.45 E-value=33 Score=34.05 Aligned_cols=44 Identities=18% Similarity=0.192 Sum_probs=29.0
Q ss_pred CCeEEEecCCCChhHHHHHhcc--------------CCCcEEEEEcCChHHHHHHHHH
Q 014571 262 GERILDMCAAPGGKTTAIASLL--------------RDEGEVVAVDRSHNKVMDIQKL 305 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~--------------~~~g~V~A~D~s~~rl~~l~~~ 305 (422)
+.+|+|++||+|.-|+.+.+.+ .+.-.|+.+|.-.+-...+=+.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~ 110 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQL 110 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHH
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhh
Confidence 5899999999999999986542 1234555555555554444443
No 387
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=49.42 E-value=17 Score=34.64 Aligned_cols=53 Identities=25% Similarity=0.342 Sum_probs=36.6
Q ss_pred HhcCCCCCCeEEEecC--CCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 255 HALDPQKGERILDMCA--APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CA--gpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
...++++|++||-.+| |-|.-+.+++...+ .+|+++|.++.+++.+++ ++|..
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--~~V~~~~~~~~~~~~~~~---~~g~~ 203 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMG--CYVVGSAGSKEKVDLLKT---KFGFD 203 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH---TSCCS
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH---HcCCc
Confidence 3457889999998876 23444445555543 589999999998877653 35764
No 388
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=48.74 E-value=32 Score=33.28 Aligned_cols=52 Identities=15% Similarity=0.210 Sum_probs=37.9
Q ss_pred HhcCCCCCCeEEEecC--CCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 255 HALDPQKGERILDMCA--APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CA--gpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
...++++|++||=.+| |-|.-+.++|..++ .+|++.|.++.|++.+++ +|..
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~----~Ga~ 210 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAK--CHVIGTCSSDEKSAFLKS----LGCD 210 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----TTCS
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHH----cCCc
Confidence 3457899999998873 34555666666653 589999999998877654 7765
No 389
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=48.44 E-value=19 Score=30.13 Aligned_cols=74 Identities=12% Similarity=0.064 Sum_probs=51.0
Q ss_pred ccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecC---Ccccc
Q 014571 282 LLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDS---MKLHK 358 (422)
Q Consensus 282 l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDa---PCSg~ 358 (422)
.|+.+-+|.-+|=++.-.+.+++.+++.|+..+. ...|+........ ...||.||+|- --+|.
T Consensus 8 ~m~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~-~a~~g~~al~~~~-------------~~~~DlillD~~MP~mdG~ 73 (134)
T 3to5_A 8 ILNKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQ-EADDGLTALPMLK-------------KGDFDFVVTDWNMPGMQGI 73 (134)
T ss_dssp -CCTTCCEEEECSCHHHHHHHHHHHHHTTCCCEE-EESSHHHHHHHHH-------------HHCCSEEEEESCCSSSCHH
T ss_pred HhCCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEE-EECCHHHHHHHHH-------------hCCCCEEEEcCCCCCCCHH
Confidence 4445568999999999999999999999986543 2346555432211 24589999996 34555
Q ss_pred CchhhhhhCCC
Q 014571 359 EVPSIAAEGLN 369 (422)
Q Consensus 359 G~l~~lrr~p~ 369 (422)
..++.+|+++.
T Consensus 74 el~~~ir~~~~ 84 (134)
T 3to5_A 74 DLLKNIRADEE 84 (134)
T ss_dssp HHHHHHHHSTT
T ss_pred HHHHHHHhCCC
Confidence 55667777664
No 390
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=48.08 E-value=49 Score=29.29 Aligned_cols=59 Identities=20% Similarity=0.231 Sum_probs=42.8
Q ss_pred eEEEecCCCChhHHHHHhccCC-CcEEEEE-cCChHHHHHHHHHHHHhCCcceEE-Eecchhhh
Q 014571 264 RILDMCAAPGGKTTAIASLLRD-EGEVVAV-DRSHNKVMDIQKLAAEMGLKCITT-YKLDALKA 324 (422)
Q Consensus 264 ~VLD~CAgpGgKT~~la~l~~~-~g~V~A~-D~s~~rl~~l~~~l~r~g~~nv~~-~~~Da~~~ 324 (422)
+|| +..|.||...++++.+.. ..+|+++ +++..+++.+.+.++..|.. +.. +..|.+..
T Consensus 3 ~vl-ITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~ 64 (245)
T 2ph3_A 3 KAL-ITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSP-LVAVLGANLLEA 64 (245)
T ss_dssp EEE-ETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCS-CEEEEECCTTSH
T ss_pred EEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc-eEEEEeccCCCH
Confidence 344 567789999998876543 3588888 89999988888777776643 444 77887654
No 391
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=47.73 E-value=12 Score=39.96 Aligned_cols=85 Identities=13% Similarity=0.076 Sum_probs=54.6
Q ss_pred CCCCeEEEecCCCChhHHHHHhccC-----------CCcEEEEEcCChHHHHHHHHHH--------------HHh-----
Q 014571 260 QKGERILDMCAAPGGKTTAIASLLR-----------DEGEVVAVDRSHNKVMDIQKLA--------------AEM----- 309 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~~-----------~~g~V~A~D~s~~rl~~l~~~l--------------~r~----- 309 (422)
++.-+|+|+|-|+|--++.+.+... ..-+++++|..+-..+.+++.+ +.+
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLA 136 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCS
T ss_pred CCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCC
Confidence 4556999999999998888766531 1367999999665555554422 111
Q ss_pred CC-----c----ceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCC
Q 014571 310 GL-----K----CITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSM 354 (422)
Q Consensus 310 g~-----~----nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaP 354 (422)
|+ . .+++..+|++......... ....||.+++|+-
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~----------~~~~~da~flD~f 180 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLDDS----------LNNQVDAWFLDGF 180 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCCGG----------GTTCEEEEEECSS
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhcccc----------cCCceeEEEECCC
Confidence 21 1 3667788988765432100 1256899999983
No 392
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=47.58 E-value=44 Score=30.28 Aligned_cols=62 Identities=16% Similarity=0.132 Sum_probs=46.1
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...+++..+. ...+|+++|+++.+++.+.+.++..|. ++.++..|.+..
T Consensus 8 ~~k~vl-VTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~ 70 (260)
T 2ae2_A 8 EGCTAL-VTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSR 70 (260)
T ss_dssp TTCEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCH
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCH
Confidence 355666 66778888888887553 345899999999998888777766653 578888888754
No 393
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=47.54 E-value=37 Score=30.54 Aligned_cols=61 Identities=23% Similarity=0.223 Sum_probs=45.4
Q ss_pred CCeEEEecCCCChhHHHHHhccC-CCcEEEEEcC-ChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLR-DEGEVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~-s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
|.++| +..|.||...+++..+. ...+|+++++ ++.+++.+.+.++..|. ++.++..|.+..
T Consensus 4 ~k~vl-VTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~ 66 (246)
T 2uvd_A 4 GKVAL-VTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS-DAIAVRADVANA 66 (246)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCH
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCH
Confidence 44555 67778998888887653 3458999999 88888888877777663 577888887754
No 394
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=47.32 E-value=50 Score=29.54 Aligned_cols=80 Identities=16% Similarity=0.222 Sum_probs=52.0
Q ss_pred CCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCC
Q 014571 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSK 341 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~ 341 (422)
|.+|| +..|.||...++++.+...+.|++++++..+++.+.+ ..++.++..|.+..... ...... . .
T Consensus 5 ~k~vl-ITGas~gIG~~~a~~l~~g~~v~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~-~~~~~~----~-~ 71 (245)
T 3e9n_A 5 KKIAV-VTGATGGMGIEIVKDLSRDHIVYALGRNPEHLAALAE------IEGVEPIESDIVKEVLE-EGGVDK----L-K 71 (245)
T ss_dssp -CEEE-EESTTSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHT------STTEEEEECCHHHHHHT-SSSCGG----G-T
T ss_pred CCEEE-EEcCCCHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHh------hcCCcceecccchHHHH-HHHHHH----H-H
Confidence 44555 6677888889998877667899999999988776554 34588888898765431 111110 0 1
Q ss_pred CCCCCCceeecCC
Q 014571 342 DNNYITSQTSDSM 354 (422)
Q Consensus 342 ~~~~FD~VLvDaP 354 (422)
..+.+|.++.-|-
T Consensus 72 ~~~~id~lv~~Ag 84 (245)
T 3e9n_A 72 NLDHVDTLVHAAA 84 (245)
T ss_dssp TCSCCSEEEECC-
T ss_pred hcCCCCEEEECCC
Confidence 1346798888553
No 395
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=46.51 E-value=23 Score=31.63 Aligned_cols=59 Identities=20% Similarity=0.151 Sum_probs=43.8
Q ss_pred eEEEecCCCChhHHHHHhccCCCc--------EEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 264 RILDMCAAPGGKTTAIASLLRDEG--------EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 264 ~VLD~CAgpGgKT~~la~l~~~~g--------~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
+|| +..|.||...+++..+...| .|++++++..+++.+.+.++..+ .++.++.+|.+..
T Consensus 4 ~vl-ITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~ 70 (244)
T 2bd0_A 4 ILL-ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALTDTITADISDM 70 (244)
T ss_dssp EEE-EETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT-CEEEEEECCTTSH
T ss_pred EEE-EECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC-CeeeEEEecCCCH
Confidence 445 66778888888887653333 79999999999888877776554 3578888888754
No 396
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=46.13 E-value=33 Score=31.19 Aligned_cols=61 Identities=18% Similarity=0.277 Sum_probs=44.9
Q ss_pred CCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHh-CCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEM-GLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~-g~~nv~~~~~Da~~~ 324 (422)
|.+|| +..|.||...+++..+. ...+|++++++..+++.+.+.++.. | .++.++..|.+..
T Consensus 7 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~ 69 (263)
T 3ai3_A 7 GKVAV-ITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG-VRVLEVAVDVATP 69 (263)
T ss_dssp TCEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTSH
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcC-CceEEEEcCCCCH
Confidence 55566 66777888888887653 3458999999999988877766654 5 3578888887754
No 397
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=46.03 E-value=21 Score=33.86 Aligned_cols=51 Identities=22% Similarity=0.223 Sum_probs=35.6
Q ss_pred hcCCCCCCeEEEecC--CCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 256 ALDPQKGERILDMCA--APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 256 ~L~p~pg~~VLD~CA--gpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
..++++|++||=.+| |-|--+.++|..++ .+|++.|.++.|++.++ ++|..
T Consensus 135 ~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~~Ga~ 187 (325)
T 3jyn_A 135 TYQVKPGEIILFHAAAGGVGSLACQWAKALG--AKLIGTVSSPEKAAHAK----ALGAW 187 (325)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHH----HHTCS
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----HcCCC
Confidence 357889999997653 22444455555543 58999999999988765 46754
No 398
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=46.00 E-value=24 Score=33.44 Aligned_cols=52 Identities=27% Similarity=0.341 Sum_probs=34.8
Q ss_pred HhcCCCCCCeEEEecC--CCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 255 HALDPQKGERILDMCA--APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CA--gpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
...++++|++||-.+| |-|.-+.+++... ..+|+++|.++.+++.+ +++|..
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~----~~~g~~ 192 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYL----KQIGFD 192 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHH----HHTTCS
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHH----HhcCCc
Confidence 3457889999998876 2333334444443 35899999999888766 345653
No 399
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=45.40 E-value=36 Score=27.50 Aligned_cols=79 Identities=10% Similarity=-0.010 Sum_probs=46.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCcc---ccCchh
Q 014571 286 EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKL---HKEVPS 362 (422)
Q Consensus 286 ~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCS---g~G~l~ 362 (422)
.-+|.-+|-++...+.+++.+++.|.........|+............. .......||.|++|.--. |...+.
T Consensus 4 ~~~ILivddd~~~~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~----~~~~~~~~dliilD~~l~~~~g~~~~~ 79 (152)
T 3heb_A 4 SVTIVMIEDDLGHARLIEKNIRRAGVNNEIIAFTDGTSALNYLFGDDKS----GRVSAGRAQLVLLDLNLPDMTGIDILK 79 (152)
T ss_dssp -CEEEEECCCHHHHHHHHHHHHHTTCCCCEEEESSHHHHHHHHHCTTSS----SGGGTTCBEEEEECSBCSSSBHHHHHH
T ss_pred CceEEEEeCCHHHHHHHHHHHHhCCCcceEEEeCCHHHHHHHHhccccc----cccccCCCCEEEEeCCCCCCcHHHHHH
Confidence 4589999999999999999999999742222334444433221100000 000134689999996433 333456
Q ss_pred hhhhCC
Q 014571 363 IAAEGL 368 (422)
Q Consensus 363 ~lrr~p 368 (422)
.+|+++
T Consensus 80 ~lr~~~ 85 (152)
T 3heb_A 80 LVKENP 85 (152)
T ss_dssp HHHHST
T ss_pred HHHhcc
Confidence 677643
No 400
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=45.31 E-value=62 Score=25.40 Aligned_cols=68 Identities=10% Similarity=-0.118 Sum_probs=44.6
Q ss_pred CcEEEEEcCChHHHHHHHHHHHHhC-CcceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCc---cccCch
Q 014571 286 EGEVVAVDRSHNKVMDIQKLAAEMG-LKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMK---LHKEVP 361 (422)
Q Consensus 286 ~g~V~A~D~s~~rl~~l~~~l~r~g-~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPC---Sg~G~l 361 (422)
..+|.-+|-++...+.+++.++..| +. +. ...|+....... ....||.|++|.-- +|...+
T Consensus 14 ~~~ilivdd~~~~~~~l~~~L~~~g~~~-v~-~~~~~~~a~~~l-------------~~~~~dlvi~D~~l~~~~g~~~~ 78 (135)
T 3snk_A 14 RKQVALFSSDPNFKRDVATRLDALAIYD-VR-VSETDDFLKGPP-------------ADTRPGIVILDLGGGDLLGKPGI 78 (135)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHTSSEE-EE-EECGGGGGGCCC-------------TTCCCSEEEEEEETTGGGGSTTH
T ss_pred CcEEEEEcCCHHHHHHHHHHHhhcCCeE-EE-EeccHHHHHHHH-------------hccCCCEEEEeCCCCCchHHHHH
Confidence 4589999999999999999999988 63 32 333444332111 13458999999643 344445
Q ss_pred hhhhhCC
Q 014571 362 SIAAEGL 368 (422)
Q Consensus 362 ~~lrr~p 368 (422)
..+|+..
T Consensus 79 ~~l~~~~ 85 (135)
T 3snk_A 79 VEARALW 85 (135)
T ss_dssp HHHHGGG
T ss_pred HHHHhhC
Confidence 5566554
No 401
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=45.24 E-value=42 Score=30.67 Aligned_cols=64 Identities=14% Similarity=0.208 Sum_probs=49.2
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 325 (422)
.|.++| +..|.||...+++..+. ...+|+.+|++..+++.+.+.++..+-.++.++..|.+...
T Consensus 9 ~~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~ 73 (262)
T 3pk0_A 9 QGRSVV-VTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRA 73 (262)
T ss_dssp TTCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHH
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHH
Confidence 355555 66777888888887653 34589999999999999888888777567889999987643
No 402
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=45.06 E-value=35 Score=31.11 Aligned_cols=62 Identities=19% Similarity=0.227 Sum_probs=46.0
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.++| +..|.||...+++..+. ...+|+.++++..+++.+.+.++..|. ++.++..|.+..
T Consensus 6 ~~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~ 68 (262)
T 1zem_A 6 NGKVCL-VTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV-EARSYVCDVTSE 68 (262)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS-CEEEEECCTTCH
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCH
Confidence 355666 66778888888887653 345899999999998888777766553 578888887754
No 403
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=45.01 E-value=24 Score=33.61 Aligned_cols=50 Identities=20% Similarity=0.270 Sum_probs=35.3
Q ss_pred cCCCCCCeEEEecC--CCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 257 LDPQKGERILDMCA--APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 257 L~p~pg~~VLD~CA--gpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
..+++|++||=.+| |-|.-+.+++..++ .+|+++|.++.|++.++ ++|..
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~~ga~ 195 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMKG--AHTIAVASTDEKLKIAK----EYGAE 195 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HTTCS
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----HcCCc
Confidence 47889999998763 23444555555543 58999999999988654 46754
No 404
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=44.91 E-value=29 Score=32.98 Aligned_cols=63 Identities=13% Similarity=0.162 Sum_probs=48.5
Q ss_pred CCCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...+++..+ ....+|++.+++..+++.+.+.++..|. .++.++..|.+..
T Consensus 7 ~~k~vl-VTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~ 71 (319)
T 3ioy_A 7 AGRTAF-VTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASR 71 (319)
T ss_dssp TTCEEE-EETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCH
T ss_pred CCCEEE-EcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCH
Confidence 355666 5666788888888765 3346899999999999999888887764 3688899998764
No 405
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=44.73 E-value=50 Score=29.40 Aligned_cols=62 Identities=16% Similarity=0.175 Sum_probs=46.7
Q ss_pred CCCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...++++.+ ....+|+++|++..+++.+.+.++..+. ++.++.+|.+..
T Consensus 10 ~~~~vl-VtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~ 72 (255)
T 1fmc_A 10 DGKCAI-ITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSE 72 (255)
T ss_dssp TTCEEE-ETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCH
T ss_pred CCCEEE-EECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCCH
Confidence 355666 6777899988888765 3346899999999998888887777653 577888887753
No 406
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=44.13 E-value=50 Score=30.74 Aligned_cols=62 Identities=24% Similarity=0.256 Sum_probs=47.1
Q ss_pred CCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 325 (422)
|.++| +..|.+|....+|..+ ...++|+.+|+++.+++.+.+.++..|. ++.++..|.++..
T Consensus 7 gKval-VTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dvt~~~ 69 (254)
T 4fn4_A 7 NKVVI-VTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK-EVLGVKADVSKKK 69 (254)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHH
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHH
Confidence 55555 4556667777777654 3457999999999999999999988884 5788889987643
No 407
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=44.03 E-value=31 Score=31.67 Aligned_cols=62 Identities=18% Similarity=0.230 Sum_probs=47.0
Q ss_pred CCCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...+++..+ ....+|+++|++..+++.+.+.++..|. ++.++..|.+..
T Consensus 30 ~~k~vl-ITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~ 92 (272)
T 1yb1_A 30 TGEIVL-ITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNR 92 (272)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCH
T ss_pred CCCEEE-EECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCCH
Confidence 355666 6677788888888755 2346899999999999888888877663 588888887754
No 408
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=44.00 E-value=39 Score=26.01 Aligned_cols=54 Identities=24% Similarity=0.221 Sum_probs=35.3
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCC--cEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDE--GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~--g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~ 323 (422)
.+.+|+=+++ |+-...+++.+... .+|+++|+++.+++.+. .. .+.++..|...
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~---~~~~~~~d~~~ 59 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RM---GVATKQVDAKD 59 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TT---TCEEEECCTTC
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hC---CCcEEEecCCC
Confidence 3557776655 76666666554222 58999999999887765 22 34566666654
No 409
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=43.80 E-value=21 Score=32.19 Aligned_cols=62 Identities=19% Similarity=0.217 Sum_probs=41.9
Q ss_pred CCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCC------cceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGL------KCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~------~nv~~~~~Da~~~ 324 (422)
+.+|| +..|.||...+++..+. ...+|++++++..+++.+.+.++..|. .++.++.+|.+..
T Consensus 7 ~k~vl-ITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 75 (264)
T 2pd6_A 7 SALAL-VTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEA 75 (264)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSH
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCH
Confidence 45566 67778888888887553 345899999999988877665554441 3577888887754
No 410
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=43.71 E-value=24 Score=34.21 Aligned_cols=53 Identities=21% Similarity=0.180 Sum_probs=36.5
Q ss_pred hcCCC-----CCCeEEEec-CC-CChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 256 ALDPQ-----KGERILDMC-AA-PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 256 ~L~p~-----pg~~VLD~C-Ag-pGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
..+++ +|++||=.+ +| -|--+.++|..++ ..+|+++|.++.|++.++ ++|.+.
T Consensus 161 ~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~----~lGad~ 220 (363)
T 4dvj_A 161 RLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVK----SLGAHH 220 (363)
T ss_dssp TSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHH----HTTCSE
T ss_pred hhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHH----HcCCCE
Confidence 44566 899998765 22 2445556666543 469999999999988765 478653
No 411
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=43.36 E-value=31 Score=27.40 Aligned_cols=75 Identities=8% Similarity=0.018 Sum_probs=45.0
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHHhCCc-ceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccc---cCc
Q 014571 285 DEGEVVAVDRSHNKVMDIQKLAAEMGLK-CITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLH---KEV 360 (422)
Q Consensus 285 ~~g~V~A~D~s~~rl~~l~~~l~r~g~~-nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg---~G~ 360 (422)
+..+|.-+|-++...+.+++.+++.|.. .+. ...+............. .....+|.|++|.-..+ ...
T Consensus 6 ~~~~ILivdd~~~~~~~l~~~L~~~g~~~~v~-~~~~~~~a~~~l~~~~~-------~~~~~~dlii~D~~l~~~~g~~~ 77 (143)
T 2qvg_A 6 DKVDILYLEDDEVDIQSVERVFHKISSLIKIE-IAKSGNQALDMLYGRNK-------ENKIHPKLILLDINIPKMNGIEF 77 (143)
T ss_dssp -CCSEEEECCCHHHHHHHHHHHHHHCTTCCEE-EESSHHHHHHHHHTCTT-------CCCCCCSEEEEETTCTTSCHHHH
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHhCCCceEE-EECCHHHHHHHHHhccc-------ccCCCCCEEEEecCCCCCCHHHH
Confidence 3457999999999999999999999873 233 33444433221110000 00245899999975443 333
Q ss_pred hhhhhhC
Q 014571 361 PSIAAEG 367 (422)
Q Consensus 361 l~~lrr~ 367 (422)
++.+++.
T Consensus 78 ~~~l~~~ 84 (143)
T 2qvg_A 78 LKELRDD 84 (143)
T ss_dssp HHHHTTS
T ss_pred HHHHHcC
Confidence 4556665
No 412
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=42.68 E-value=28 Score=28.40 Aligned_cols=54 Identities=17% Similarity=0.201 Sum_probs=37.3
Q ss_pred CCeEEEecCCCChhHHHHHhccCC-CcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~~-~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
+.+|+=+++ |....++++.+.. ...|+++|.++.+++.+++ .| +.++.+|.+..
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~---~~~~~gd~~~~ 60 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG---FDAVIADPTDE 60 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT---CEEEECCTTCH
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC---CcEEECCCCCH
Confidence 346665555 6677777766532 3589999999998877764 33 56778887754
No 413
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=42.55 E-value=24 Score=33.89 Aligned_cols=53 Identities=21% Similarity=0.217 Sum_probs=37.8
Q ss_pred HhcCCCCCCeEEEecC--CCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 255 HALDPQKGERILDMCA--APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 255 ~~L~p~pg~~VLD~CA--gpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
....+++|++||=.+| |-|.-+.++|..++ .+|+++|.++.+++.+++ +|...
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----~ga~~ 207 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMG--AKVIAVVNRTAATEFVKS----VGADI 207 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHH----HTCSE
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCcE
Confidence 3456889999997765 23555566666653 589999999999876654 67654
No 414
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=42.55 E-value=46 Score=30.50 Aligned_cols=62 Identities=21% Similarity=0.300 Sum_probs=47.2
Q ss_pred CCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCC-cceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGL-KCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~-~nv~~~~~Da~~~ 324 (422)
|.+|| +..|.||...++++.+. ...+|++++++..+++.+.+.++..|. ..+.++.+|.+..
T Consensus 32 ~k~vl-VTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~ 95 (279)
T 1xg5_A 32 DRLAL-VTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE 95 (279)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCH
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCH
Confidence 55565 56778888888887553 345899999999999988888887775 3578888887754
No 415
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=42.49 E-value=30 Score=33.36 Aligned_cols=53 Identities=17% Similarity=0.146 Sum_probs=36.7
Q ss_pred hcCCC-CCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 256 ALDPQ-KGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 256 ~L~p~-pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
...++ +|++||=.+||+ |.-+.++|..++ .+|+++|.++.|++.+++ ++|.+.
T Consensus 174 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~~~~~~~~~~~~---~lGa~~ 228 (357)
T 2cf5_A 174 HFGLKQPGLRGGILGLGGVGHMGVKIAKAMG--HHVTVISSSNKKREEALQ---DLGADD 228 (357)
T ss_dssp HTSTTSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSTTHHHHHHT---TSCCSC
T ss_pred hcCCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHH---HcCCce
Confidence 34677 999999887543 333455566553 589999999988876652 577654
No 416
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=42.27 E-value=58 Score=29.66 Aligned_cols=61 Identities=15% Similarity=0.003 Sum_probs=46.1
Q ss_pred CCeEEEecCCCChhHHHHHhccC-CCcEEEEEcC-ChHHHHHHHHHHHHh-CCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLR-DEGEVVAVDR-SHNKVMDIQKLAAEM-GLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~-s~~rl~~l~~~l~r~-g~~nv~~~~~Da~~~ 324 (422)
|.++| +..|.||...+++..+. ...+|+++|+ +..+++.+.+.++.. | .++.++..|.+..
T Consensus 11 ~k~~l-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~ 74 (276)
T 1mxh_A 11 CPAAV-ITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA-GSAVLCKGDLSLS 74 (276)
T ss_dssp CCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSS
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC-CceEEEeccCCCc
Confidence 55566 77788999888887653 3458999999 999888887777665 5 4578888887654
No 417
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=42.27 E-value=35 Score=30.83 Aligned_cols=61 Identities=21% Similarity=0.263 Sum_probs=45.3
Q ss_pred CCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
|.++| +..|.||...+++..+. ...+|++++++..+++.+.+.++..|. ++.++..|.+..
T Consensus 7 ~k~~l-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~ 68 (247)
T 2jah_A 7 GKVAL-ITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA-KVHVLELDVADR 68 (247)
T ss_dssp TCEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCH
Confidence 44555 55677888888877653 345899999999999888887776653 578888887754
No 418
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=41.80 E-value=42 Score=31.77 Aligned_cols=51 Identities=20% Similarity=0.225 Sum_probs=35.6
Q ss_pred hcCCCCCCeEEEecC--CCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 256 ALDPQKGERILDMCA--APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 256 ~L~p~pg~~VLD~CA--gpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
...+++|++||=.+| |-|.-+.+++... ..+|+++|.++.+++.+++ +|..
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~g~~ 192 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARK----LGCH 192 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCS
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCC
Confidence 456889999997764 3344455555554 3589999999988877654 5654
No 419
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=41.78 E-value=24 Score=34.02 Aligned_cols=50 Identities=22% Similarity=0.266 Sum_probs=35.1
Q ss_pred hcCCCCCCeEEEecCCCC---hhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 256 ALDPQKGERILDMCAAPG---GKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 256 ~L~p~pg~~VLD~CAgpG---gKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
...+++|++||=. +|.| .-+.++|..++ .+|++.|.++.|++.+++ +|..
T Consensus 162 ~~~~~~g~~VlV~-Gg~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----lGa~ 214 (353)
T 4dup_A 162 MAGLTEGESVLIH-GGTSGIGTTAIQLARAFG--AEVYATAGSTGKCEACER----LGAK 214 (353)
T ss_dssp TTCCCTTCEEEES-STTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH----HTCS
T ss_pred hcCCCCCCEEEEE-cCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCC
Confidence 4568899999965 3334 44455555543 589999999999887654 6764
No 420
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=41.67 E-value=48 Score=29.60 Aligned_cols=61 Identities=18% Similarity=0.165 Sum_probs=46.9
Q ss_pred CCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
|.++| +..|.||...+++..+- ...+|+.++++..+++.+.+.++..|. ++.++..|.+..
T Consensus 5 ~k~vl-ITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~ 66 (247)
T 3lyl_A 5 EKVAL-VTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF-KARGLVLNISDI 66 (247)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCH
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCH
Confidence 44555 56677888888877553 346899999999999999988888764 588888888754
No 421
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=41.48 E-value=40 Score=27.76 Aligned_cols=51 Identities=18% Similarity=0.220 Sum_probs=35.5
Q ss_pred HHHHhcCCCCCCeEEEecCCCChhHHHHHhccCCC-cEEEEEcCChHHHHHHHH
Q 014571 252 VTAHALDPQKGERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQK 304 (422)
Q Consensus 252 lv~~~L~p~pg~~VLD~CAgpGgKT~~la~l~~~~-g~V~A~D~s~~rl~~l~~ 304 (422)
.++..+....|.+|+=+++ |+-...+++.+... .+|+.+|+++.+.+.+.+
T Consensus 11 ~a~~~~~~~~~~~v~iiG~--G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~ 62 (144)
T 3oj0_A 11 IVYDIVRKNGGNKILLVGN--GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAE 62 (144)
T ss_dssp HHHHHHHHHCCCEEEEECC--SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHhccCCEEEEECC--CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHH
Confidence 4455555566899998776 66666666665433 369999999998876544
No 422
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=41.46 E-value=54 Score=25.43 Aligned_cols=67 Identities=13% Similarity=-0.090 Sum_probs=43.5
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccc---cCchhh
Q 014571 287 GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLH---KEVPSI 363 (422)
Q Consensus 287 g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg---~G~l~~ 363 (422)
.+|.-+|-++...+.++..+++.|+.. . ...|+........ ...+|.|++|.--.+ ...+..
T Consensus 3 ~~ILivdd~~~~~~~l~~~l~~~g~~v-~-~~~~~~~al~~l~-------------~~~~dlvllD~~~p~~~g~~~~~~ 67 (122)
T 3gl9_A 3 KKVLLVDDSAVLRKIVSFNLKKEGYEV-I-EAENGQIALEKLS-------------EFTPDLIVLXIMMPVMDGFTVLKK 67 (122)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEE-E-EESSHHHHHHHHT-------------TBCCSEEEECSCCSSSCHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHHCCcEE-E-EeCCHHHHHHHHH-------------hcCCCEEEEeccCCCCcHHHHHHH
Confidence 368899999999999999999988743 2 3345554432211 245899999974433 333455
Q ss_pred hhhCC
Q 014571 364 AAEGL 368 (422)
Q Consensus 364 lrr~p 368 (422)
+|+.+
T Consensus 68 l~~~~ 72 (122)
T 3gl9_A 68 LQEKE 72 (122)
T ss_dssp HHTST
T ss_pred HHhcc
Confidence 66543
No 423
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=41.30 E-value=36 Score=31.43 Aligned_cols=62 Identities=21% Similarity=0.154 Sum_probs=45.9
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...+++..+. ...+|+++++++.+++.+.+.++..|. ++.++..|.+..
T Consensus 21 ~~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~ 83 (277)
T 2rhc_B 21 DSEVAL-VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSV 83 (277)
T ss_dssp TSCEEE-EETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCH
T ss_pred CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCH
Confidence 355666 56667888888887653 345899999999998888777777663 578888887754
No 424
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=41.21 E-value=22 Score=33.29 Aligned_cols=49 Identities=22% Similarity=0.253 Sum_probs=35.8
Q ss_pred CCCCCeEEEecC--CCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 259 PQKGERILDMCA--APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 259 p~pg~~VLD~CA--gpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
+++|++||-.+| |-|.-+.++|..++ .+|+++|.++.|++.++ ++|...
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~~ga~~ 173 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG--LRVLAAASRPEKLALPL----ALGAEE 173 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSGGGSHHHH----HTTCSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----hcCCCE
Confidence 889999998876 23445566666653 58999999999887764 467653
No 425
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=41.19 E-value=66 Score=28.94 Aligned_cols=61 Identities=15% Similarity=0.112 Sum_probs=46.1
Q ss_pred CCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
|.+|| +..|.||...+++..+. ....|++++++..+++.+.+.++..|. ++.++..|.+..
T Consensus 14 ~k~vl-ITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~ 75 (266)
T 1xq1_A 14 AKTVL-VTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASLR 75 (266)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eeEEEECCCCCH
Confidence 55666 67788998888887553 345899999999998888777776653 578888887654
No 426
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=41.15 E-value=31 Score=27.96 Aligned_cols=70 Identities=11% Similarity=-0.056 Sum_probs=45.8
Q ss_pred CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccc---cCch
Q 014571 285 DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLH---KEVP 361 (422)
Q Consensus 285 ~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg---~G~l 361 (422)
+..+|.-+|-++...+.+++.+++.|...+.....|......... ...||.|++|.--.+ ...+
T Consensus 14 ~~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~-------------~~~~dlii~d~~l~~~~g~~~~ 80 (152)
T 3eul_A 14 EKVRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAAALELIK-------------AHLPDVALLDYRMPGMDGAQVA 80 (152)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHSSEEEEEEESSHHHHHHHHH-------------HHCCSEEEEETTCSSSCHHHHH
T ss_pred ceEEEEEEcCCHHHHHHHHHHHhhCCCeEEEEEeCCHHHHHHHHH-------------hcCCCEEEEeCCCCCCCHHHHH
Confidence 457899999999999999999999985433334455544432111 234799999965433 3334
Q ss_pred hhhhhC
Q 014571 362 SIAAEG 367 (422)
Q Consensus 362 ~~lrr~ 367 (422)
..+++.
T Consensus 81 ~~l~~~ 86 (152)
T 3eul_A 81 AAVRSY 86 (152)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 556654
No 427
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=41.06 E-value=55 Score=29.63 Aligned_cols=63 Identities=24% Similarity=0.321 Sum_probs=45.9
Q ss_pred CCCeEEEecCCCC-hhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPG-GKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpG-gKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.+||= ..|.| |...+++..+ ....+|+.+|++..+++.+.+.++..+-.++.++..|.+..
T Consensus 21 ~~k~vlI-TGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~ 85 (266)
T 3o38_A 21 KGKVVLV-TAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTST 85 (266)
T ss_dssp TTCEEEE-SSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCH
T ss_pred CCCEEEE-ECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCH
Confidence 3556664 44445 5666666544 33468999999999999988888777666799999998764
No 428
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=40.80 E-value=58 Score=28.24 Aligned_cols=98 Identities=17% Similarity=0.089 Sum_probs=59.8
Q ss_pred ecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCCCCCCC
Q 014571 268 MCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYI 346 (422)
Q Consensus 268 ~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~F 346 (422)
+..|+|+...++++.+ ....+|+++++++.++..+. -.+++++.+|.+.... . ....+
T Consensus 5 VtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~~D~~d~~~------~--------~~~~~ 63 (224)
T 3h2s_A 5 VLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-------GATVATLVKEPLVLTE------A--------DLDSV 63 (224)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-------CTTSEEEECCGGGCCH------H--------HHTTC
T ss_pred EEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-------CCCceEEecccccccH------h--------hcccC
Confidence 4567898888888765 33458999999988765432 1468889999876432 0 01346
Q ss_pred CceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHHHHHhccceeccEEEe
Q 014571 347 TSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEINALVVGLRIQKVLVL 406 (422)
Q Consensus 347 D~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~IL~~a~~lr~~~~~~~ 406 (422)
|.|+. |.|.. |.+... .......+.+++.+.... .+++.+
T Consensus 64 d~vi~---~ag~~--------------~~~~~~--~~n~~~~~~l~~a~~~~~-~~~v~~ 103 (224)
T 3h2s_A 64 DAVVD---ALSVP--------------WGSGRG--YLHLDFATHLVSLLRNSD-TLAVFI 103 (224)
T ss_dssp SEEEE---CCCCC--------------TTSSCT--HHHHHHHHHHHHTCTTCC-CEEEEE
T ss_pred CEEEE---CCccC--------------CCcchh--hHHHHHHHHHHHHHHHcC-CcEEEE
Confidence 88887 33322 222212 234556677887775554 444444
No 429
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=40.55 E-value=48 Score=30.73 Aligned_cols=64 Identities=16% Similarity=0.064 Sum_probs=47.7
Q ss_pred CCCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 325 (422)
.|.++| +..|.||...+++..+ ....+|+.+|++..+++.+.+.+...+-..+.++..|.+...
T Consensus 32 ~gk~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~ 96 (281)
T 4dry_A 32 EGRIAL-VTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPD 96 (281)
T ss_dssp --CEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHH
T ss_pred CCCEEE-EeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHH
Confidence 355666 6777788888888765 334689999999999998888887766555688889987643
No 430
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=40.43 E-value=62 Score=25.07 Aligned_cols=67 Identities=7% Similarity=-0.008 Sum_probs=43.0
Q ss_pred CcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccc---cCchh
Q 014571 286 EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLH---KEVPS 362 (422)
Q Consensus 286 ~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg---~G~l~ 362 (422)
..+|.-+|-++...+.+++.++..|... . ...|+....... ....||.|++|....+ ...++
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~~v-~-~~~~~~~a~~~l-------------~~~~~dlvi~d~~l~~~~g~~~~~ 71 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSLGATT-V-LAADGVDALELL-------------GGFTPDLMICDIAMPRMNGLKLLE 71 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTCEE-E-EESCHHHHHHHH-------------TTCCCSEEEECCC-----CHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCceE-E-EeCCHHHHHHHH-------------hcCCCCEEEEecCCCCCCHHHHHH
Confidence 3589999999999999999999998742 2 234554443221 1245899999975433 33345
Q ss_pred hhhhC
Q 014571 363 IAAEG 367 (422)
Q Consensus 363 ~lrr~ 367 (422)
.+|+.
T Consensus 72 ~l~~~ 76 (130)
T 3eod_A 72 HIRNR 76 (130)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 56654
No 431
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=40.28 E-value=39 Score=30.57 Aligned_cols=59 Identities=22% Similarity=0.137 Sum_probs=43.8
Q ss_pred eEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 264 RILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 264 ~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
++| +..|.||...+++..+. ...+|++++++..+++.+.+.++..|. ++.++..|.+..
T Consensus 4 ~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~ 63 (256)
T 1geg_A 4 VAL-VTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSDR 63 (256)
T ss_dssp EEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSH
T ss_pred EEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCH
Confidence 344 56677888888877553 345899999999998888877776663 577888887754
No 432
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=40.19 E-value=52 Score=30.15 Aligned_cols=62 Identities=18% Similarity=0.228 Sum_probs=44.7
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHH-HHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLA-AEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l-~r~g~~nv~~~~~Da~~~ 324 (422)
.|.++| +..|.||...+++..+. ...+|++++++..+++.+.+.+ +..|. ++.++..|.+..
T Consensus 20 ~~k~~l-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~ 83 (267)
T 1vl8_A 20 RGRVAL-VTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSNY 83 (267)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCH
T ss_pred CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-eEEEEEcCCCCH
Confidence 355565 66677888888887653 3458999999999988877766 44553 477788887754
No 433
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=39.83 E-value=22 Score=29.35 Aligned_cols=53 Identities=15% Similarity=0.215 Sum_probs=36.5
Q ss_pred CeEEEecCCCChhHHHHHhccCC-CcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 263 ERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 263 ~~VLD~CAgpGgKT~~la~l~~~-~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.+|+=+ |-|.....+++.+.. ...|+++|.++.+++.+++ .| +.++.+|++..
T Consensus 8 ~~viIi--G~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g---~~~i~gd~~~~ 61 (140)
T 3fwz_A 8 NHALLV--GYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RG---VRAVLGNAANE 61 (140)
T ss_dssp SCEEEE--CCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT---CEEEESCTTSH
T ss_pred CCEEEE--CcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cC---CCEEECCCCCH
Confidence 345534 457777777766532 3589999999999887764 44 46788888754
No 434
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=39.45 E-value=66 Score=29.27 Aligned_cols=62 Identities=15% Similarity=0.105 Sum_probs=46.5
Q ss_pred CCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHH-hCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAE-MGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r-~g~~nv~~~~~Da~~~ 324 (422)
|.++| +..|.||...+++..+. ...+|+.+|++..+++.+.+.++. .+-.++.++..|.+..
T Consensus 8 ~k~~l-VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~ 71 (265)
T 3lf2_A 8 EAVAV-VTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDA 71 (265)
T ss_dssp TCEEE-EETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCH
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCH
Confidence 44555 56677888888877553 346899999999999998888876 5545588888998764
No 435
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=39.28 E-value=36 Score=32.82 Aligned_cols=51 Identities=16% Similarity=0.115 Sum_probs=35.2
Q ss_pred hcCCCCCCeEEEecC--CCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 256 ALDPQKGERILDMCA--APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 256 ~L~p~pg~~VLD~CA--gpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
..++++|++||-.+| |-|.-+.+++... ..+|+++|.++.+++.+ +++|..
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~----~~~ga~ 217 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIV----LQNGAH 217 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHH----HHTTCS
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHH----HHcCCC
Confidence 457889999998875 2233344555544 35899999999988754 456764
No 436
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=39.23 E-value=69 Score=29.34 Aligned_cols=62 Identities=21% Similarity=0.314 Sum_probs=45.6
Q ss_pred CCCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcC-------------ChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLL-RDEGEVVAVDR-------------SHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~-------------s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.++| +..|.||...+++..+ ....+|+++|+ +..+++.+.+.++..| .++.++..|.+..
T Consensus 14 ~gk~~l-VTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~ 89 (280)
T 3pgx_A 14 QGRVAF-ITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG-RKALTRVLDVRDD 89 (280)
T ss_dssp TTCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT-CCEEEEECCTTCH
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-CeEEEEEcCCCCH
Confidence 465666 5666788888887755 33468999998 7888888888777766 3578888888754
No 437
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=39.17 E-value=32 Score=34.92 Aligned_cols=55 Identities=16% Similarity=0.227 Sum_probs=40.8
Q ss_pred CeEEEecCCCChhHHHHHhccCCC-cEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhh
Q 014571 263 ERILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325 (422)
Q Consensus 263 ~~VLD~CAgpGgKT~~la~l~~~~-g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 325 (422)
++|+= ||-|....++|+.+... -.|+.+|.++.+++.+.+. ++ +.++.+|++...
T Consensus 4 M~iiI--~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~---~~---~~~i~Gd~~~~~ 59 (461)
T 4g65_A 4 MKIII--LGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDK---YD---LRVVNGHASHPD 59 (461)
T ss_dssp EEEEE--ECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHH---SS---CEEEESCTTCHH
T ss_pred CEEEE--ECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh---cC---cEEEEEcCCCHH
Confidence 34443 56688888999877544 4799999999999887654 33 578899998754
No 438
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=39.06 E-value=25 Score=33.66 Aligned_cols=60 Identities=12% Similarity=0.124 Sum_probs=45.1
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCC-c--EEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDE-G--EVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~-g--~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.+|| +..|+|+...++++.+... | +|+++++++.+...+.+.+. -.++.++.+|.+..
T Consensus 20 ~~k~vl-VTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~v~~~~~Dl~d~ 82 (344)
T 2gn4_A 20 DNQTIL-ITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN---DPRMRFFIGDVRDL 82 (344)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC---CTTEEEEECCTTCH
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc---CCCEEEEECCCCCH
Confidence 466777 6778899999998766433 3 89999999988877765442 35688999998764
No 439
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=38.97 E-value=51 Score=30.39 Aligned_cols=61 Identities=21% Similarity=0.242 Sum_probs=46.2
Q ss_pred CCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
|.++| +..|.||...+++..+ ....+|+.+|++..+++.+.+.++..|. ++.++..|.+..
T Consensus 4 ~k~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~ 65 (264)
T 3tfo_A 4 DKVIL-ITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG-TALAQVLDVTDR 65 (264)
T ss_dssp TCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-EEEEEECCTTCH
T ss_pred CCEEE-EeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcCCCCH
Confidence 44455 5667788888888765 3346899999999999999888887764 577888888754
No 440
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=38.78 E-value=64 Score=28.54 Aligned_cols=61 Identities=20% Similarity=0.234 Sum_probs=45.0
Q ss_pred CCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHH-hCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAE-MGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r-~g~~nv~~~~~Da~~~ 324 (422)
|.+|| +..|.||...++++.+. ...+|++++++..+++.+.+.++. .+ .++.++..|.+..
T Consensus 7 ~~~vl-VtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~ 69 (248)
T 2pnf_A 7 GKVSL-VTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG-VKAHGVEMNLLSE 69 (248)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHC-CCEEEEECCTTCH
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcC-CceEEEEccCCCH
Confidence 45555 67778999888887653 346899999999998888777655 45 3578888887653
No 441
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=38.74 E-value=70 Score=28.59 Aligned_cols=62 Identities=18% Similarity=0.198 Sum_probs=47.4
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...++++.+. ...+|+.+|++..+++.+.+.++..+ ..+.++..|.+..
T Consensus 8 ~~k~vl-ITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~ 70 (253)
T 3qiv_A 8 ENKVGI-VTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG-GTAISVAVDVSDP 70 (253)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTSH
T ss_pred CCCEEE-EECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CcEEEEEccCCCH
Confidence 355666 56677888888887653 34689999999999999988888766 3578888898764
No 442
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=38.71 E-value=48 Score=30.06 Aligned_cols=61 Identities=20% Similarity=0.111 Sum_probs=47.1
Q ss_pred CCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
|.++| +..|.||...+++..+. ...+|+.+|++..+++.+.+.++..|. ++.++..|.+..
T Consensus 7 ~k~vl-VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~ 68 (252)
T 3h7a_A 7 NATVA-VIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARNE 68 (252)
T ss_dssp SCEEE-EECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECCTTCH
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECcCCCH
Confidence 44555 56677888888877653 345899999999999999998888763 688889998764
No 443
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=38.44 E-value=42 Score=32.45 Aligned_cols=52 Identities=17% Similarity=0.183 Sum_probs=35.7
Q ss_pred hcCCC-CCCeEEEecCCC-ChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 256 ALDPQ-KGERILDMCAAP-GGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 256 ~L~p~-pg~~VLD~CAgp-GgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
.+.++ +|++||=.+||+ |.-+.++|..++ .+|+++|.++.+++.+++ ++|..
T Consensus 181 ~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~---~lGa~ 234 (366)
T 1yqd_A 181 YFGLDEPGKHIGIVGLGGLGHVAVKFAKAFG--SKVTVISTSPSKKEEALK---NFGAD 234 (366)
T ss_dssp HTTCCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCGGGHHHHHH---TSCCS
T ss_pred hcCcCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH---hcCCc
Confidence 34677 999999887543 333445555543 589999999998876542 56764
No 444
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=38.22 E-value=72 Score=24.71 Aligned_cols=76 Identities=11% Similarity=0.013 Sum_probs=45.0
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccc---cCchhh
Q 014571 287 GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLH---KEVPSI 363 (422)
Q Consensus 287 g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg---~G~l~~ 363 (422)
.+|.-+|-++...+.+++.+++.|.........++............ ......||.|++|.--.+ ...+..
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~------~~~~~~~dlvi~d~~~~~~~g~~~~~~ 76 (140)
T 1k68_A 3 KKIFLVEDNKADIRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGE------YANASRPDLILLXLNLPKKDGREVLAE 76 (140)
T ss_dssp CEEEEECCCHHHHHHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGG------GGSCCCCSEEEECSSCSSSCHHHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHHhcCCCceEEEECCHHHHHHHHHcccc------cccCCCCcEEEEecCCCcccHHHHHHH
Confidence 47899999999999999999998874222233344443322110000 000145899999975433 333466
Q ss_pred hhhCC
Q 014571 364 AAEGL 368 (422)
Q Consensus 364 lrr~p 368 (422)
+++.+
T Consensus 77 l~~~~ 81 (140)
T 1k68_A 77 IKSDP 81 (140)
T ss_dssp HHHST
T ss_pred HHcCc
Confidence 77654
No 445
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=38.19 E-value=71 Score=28.94 Aligned_cols=62 Identities=21% Similarity=0.194 Sum_probs=48.1
Q ss_pred CCCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...+++..+ ....+|+.++++..+++.+.+.+...|. ++.++..|.+..
T Consensus 28 ~~k~vl-ITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~ 90 (262)
T 3rkr_A 28 SGQVAV-VTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG-EAESHACDLSHS 90 (262)
T ss_dssp TTCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCH
T ss_pred CCCEEE-EECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-ceeEEEecCCCH
Confidence 456666 6667788888888765 3346899999999999999988887764 588888888754
No 446
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=38.07 E-value=50 Score=29.24 Aligned_cols=61 Identities=26% Similarity=0.208 Sum_probs=45.2
Q ss_pred CeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHH-HhCCcceEEEecchhhhh
Q 014571 263 ERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAA-EMGLKCITTYKLDALKAV 325 (422)
Q Consensus 263 ~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~-r~g~~nv~~~~~Da~~~~ 325 (422)
.++| +..|.||...++++.+. ....|+.++++..+++.+.+.+. ..| .++.++..|.+...
T Consensus 3 k~vl-ITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~ 65 (235)
T 3l77_A 3 KVAV-ITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-VEVFYHHLDVSKAE 65 (235)
T ss_dssp CEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTCHH
T ss_pred CEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CeEEEEEeccCCHH
Confidence 3444 56677888888887653 34589999999999988887776 444 46888889987653
No 447
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=38.06 E-value=81 Score=27.81 Aligned_cols=59 Identities=24% Similarity=0.211 Sum_probs=44.0
Q ss_pred eEEEecCCCChhHHHHHhccC-CCcEEEE-EcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 264 RILDMCAAPGGKTTAIASLLR-DEGEVVA-VDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 264 ~VLD~CAgpGgKT~~la~l~~-~~g~V~A-~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
+|| +..|.||...++++.+. ...+|++ .+++..+++.+.+.++..+. ++.++.+|.+..
T Consensus 3 ~vl-VTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~ 63 (244)
T 1edo_A 3 VVV-VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDVSKE 63 (244)
T ss_dssp EEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTC-EEEEEECCTTSH
T ss_pred EEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEeCCCCCH
Confidence 444 67788999988887653 3357888 58999999888887777663 578888887754
No 448
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=37.76 E-value=80 Score=29.08 Aligned_cols=63 Identities=13% Similarity=0.110 Sum_probs=46.0
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHh----CCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEM----GLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~----g~~nv~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...+++..+. ...+|++++++..+++.+.+.++.. .-.++.++.+|.+..
T Consensus 17 ~~k~vl-VTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~ 84 (303)
T 1yxm_A 17 QGQVAI-VTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNE 84 (303)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCH
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCH
Confidence 355666 56677888888887653 3468999999999988887777652 124588888998754
No 449
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=37.66 E-value=1.1e+02 Score=24.14 Aligned_cols=69 Identities=14% Similarity=0.114 Sum_probs=46.4
Q ss_pred CcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccc---cCchh
Q 014571 286 EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLH---KEVPS 362 (422)
Q Consensus 286 ~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg---~G~l~ 362 (422)
..+|.-+|-++...+.+++.+++.|.........|......... ...||.|++|.--.+ ...+.
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~-------------~~~~dlii~D~~l~~~~g~~~~~ 71 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQ-------------QAKYDLIILDIGLPIANGFEVMS 71 (144)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHT-------------TCCCSEEEECTTCGGGCHHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhh-------------cCCCCEEEEeCCCCCCCHHHHHH
Confidence 45899999999999999999999987643344445544432211 245899999975544 33345
Q ss_pred hhhhC
Q 014571 363 IAAEG 367 (422)
Q Consensus 363 ~lrr~ 367 (422)
.+|++
T Consensus 72 ~lr~~ 76 (144)
T 3kht_A 72 AVRKP 76 (144)
T ss_dssp HHHSS
T ss_pred HHHhc
Confidence 57763
No 450
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=37.40 E-value=38 Score=29.11 Aligned_cols=50 Identities=16% Similarity=0.283 Sum_probs=38.3
Q ss_pred ecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 268 MCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 268 ~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
+..|.|+-..++++.+... +|+++++++.+++.+.+.+. . .++.+|.+..
T Consensus 5 VtGasg~iG~~la~~l~~~-~V~~~~r~~~~~~~~~~~~~-----~-~~~~~D~~~~ 54 (207)
T 2yut_A 5 ITGATGGLGGAFARALKGH-DLLLSGRRAGALAELAREVG-----A-RALPADLADE 54 (207)
T ss_dssp EETTTSHHHHHHHHHTTTS-EEEEECSCHHHHHHHHHHHT-----C-EECCCCTTSH
T ss_pred EEcCCcHHHHHHHHHHHhC-CEEEEECCHHHHHHHHHhcc-----C-cEEEeeCCCH
Confidence 5667899999999988777 99999999988877665432 1 6677787653
No 451
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=37.33 E-value=31 Score=36.43 Aligned_cols=93 Identities=10% Similarity=0.052 Sum_probs=55.6
Q ss_pred CCCCeEEEecCCCChhHHHHHhcc-----------CCCcEEEEEcC---ChHHHHHHH-----------HHHHHh-----
Q 014571 260 QKGERILDMCAAPGGKTTAIASLL-----------RDEGEVVAVDR---SHNKVMDIQ-----------KLAAEM----- 309 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~l~-----------~~~g~V~A~D~---s~~rl~~l~-----------~~l~r~----- 309 (422)
++.-+|||+|-|+|--++...+.. ..+-+++++|. ++.-+..+- +.++.+
T Consensus 65 ~~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 144 (676)
T 3ps9_A 65 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 144 (676)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCS
T ss_pred CCceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCC
Confidence 345689999999999887776543 12356899999 555554211 222222
Q ss_pred CC---------cceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCC
Q 014571 310 GL---------KCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNG 370 (422)
Q Consensus 310 g~---------~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~ 370 (422)
|+ -.++...+|++......... ....||.|++|+-. -+++|+.
T Consensus 145 ~~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~----------~~~~~d~~~~D~f~--------p~~np~~ 196 (676)
T 3ps9_A 145 GCHRLLLDAGRVTLDLWFGDINELTSQLDDS----------LNQKVDAWFLDGFA--------PAKNPDM 196 (676)
T ss_dssp EEEEEEEGGGTEEEEEEESCHHHHGGGBCGG----------GTTCEEEEEECCSC--------GGGCGGG
T ss_pred CceEEEecCCcEEEEEecCCHHHHHHhcccc----------cCCcccEEEECCCC--------CcCChhh
Confidence 11 12456667887765432110 13568999999832 3467776
No 452
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=36.68 E-value=60 Score=29.34 Aligned_cols=61 Identities=18% Similarity=0.174 Sum_probs=45.8
Q ss_pred CCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
|.++| +..|.||...+++..+. ...+|+.+|++..+++.+.+.++..| .++.++..|.+..
T Consensus 5 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~ 66 (260)
T 2qq5_A 5 GQVCV-VTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG-GQCVPVVCDSSQE 66 (260)
T ss_dssp TCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-SEEEEEECCTTSH
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC-CceEEEECCCCCH
Confidence 44555 66778888888887653 34689999999999988887777766 3578888888754
No 453
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=36.58 E-value=84 Score=28.60 Aligned_cols=62 Identities=13% Similarity=0.201 Sum_probs=45.9
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCC------------hHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRS------------HNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s------------~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...+++..+- ...+|+.+|++ ..+++.+...++..| .++.++..|.+..
T Consensus 9 ~gk~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~ 83 (287)
T 3pxx_A 9 QDKVVL-VTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-RKAYTAEVDVRDR 83 (287)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-SCEEEEECCTTCH
T ss_pred CCCEEE-EeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC-CceEEEEccCCCH
Confidence 355666 66677888888887653 34689999987 788888888777776 4588888888764
No 454
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=36.58 E-value=54 Score=30.11 Aligned_cols=62 Identities=13% Similarity=0.289 Sum_probs=45.8
Q ss_pred CCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCc--ceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLK--CITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~--nv~~~~~Da~~~ 324 (422)
|.++| +..|.||...+++..+. ...+|+++|++..+++.+.+.++..|.. ++.++..|.+..
T Consensus 6 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 70 (280)
T 1xkq_A 6 NKTVI-ITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTE 70 (280)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSH
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCH
Confidence 44555 66778888888887653 3468999999999998887777665542 588888998764
No 455
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=36.54 E-value=49 Score=29.91 Aligned_cols=62 Identities=27% Similarity=0.236 Sum_probs=45.8
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...+++..+. ...+|+++|++..+++.+.+.++..|. .+.++..|.+..
T Consensus 13 ~~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~ 75 (260)
T 2zat_A 13 ENKVAL-VTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL-SVTGTVCHVGKA 75 (260)
T ss_dssp TTCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCH
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCH
Confidence 355666 67778888888887653 345899999999998888777776663 477788887653
No 456
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=36.14 E-value=39 Score=31.18 Aligned_cols=61 Identities=13% Similarity=0.206 Sum_probs=45.3
Q ss_pred CCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHh-CCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEM-GLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~-g~~nv~~~~~Da~~~ 324 (422)
|.+|| +..|.||...+++..+. ...+|++++++..+++.+.+.++.. + .++.++.+|.+..
T Consensus 26 ~k~vl-ITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~ 88 (302)
T 1w6u_A 26 GKVAF-ITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQCDVRDP 88 (302)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCH
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CceEEEEeCCCCH
Confidence 55566 56677888888887653 3458999999999988877776654 4 3588888998754
No 457
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=35.40 E-value=86 Score=24.64 Aligned_cols=66 Identities=15% Similarity=-0.011 Sum_probs=44.6
Q ss_pred CcEEEEEcCChHHHHHHHHHHHH-hCCcceEEEecchhhhhhccCCCCCCccccCCCCC-CCCCceeecCCcc----ccC
Q 014571 286 EGEVVAVDRSHNKVMDIQKLAAE-MGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDN-NYITSQTSDSMKL----HKE 359 (422)
Q Consensus 286 ~g~V~A~D~s~~rl~~l~~~l~r-~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~-~~FD~VLvDaPCS----g~G 359 (422)
..+|.-+|-++.....+++.++. .|+. +. ...|+....... .. ..||.|++|.-.. |..
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~~~~~-v~-~~~~~~~a~~~l-------------~~~~~~dlvi~D~~l~~~~~g~~ 68 (140)
T 3lua_A 4 DGTVLLIDYFEYEREKTKIIFDNIGEYD-FI-EVENLKKFYSIF-------------KDLDSITLIIMDIAFPVEKEGLE 68 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHHCCCE-EE-EECSHHHHHTTT-------------TTCCCCSEEEECSCSSSHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhccCcc-EE-EECCHHHHHHHH-------------hcCCCCcEEEEeCCCCCCCcHHH
Confidence 46899999999999999999999 7774 33 344554443211 12 4689999998665 333
Q ss_pred chhhhhh
Q 014571 360 VPSIAAE 366 (422)
Q Consensus 360 ~l~~lrr 366 (422)
.+..+|+
T Consensus 69 ~~~~l~~ 75 (140)
T 3lua_A 69 VLSAIRN 75 (140)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 3455666
No 458
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=35.22 E-value=30 Score=33.45 Aligned_cols=49 Identities=16% Similarity=0.068 Sum_probs=34.1
Q ss_pred hcCCC--C-------CCeEEEecCCCChhH---HHHHhccCCCcEEEEEcCCh---HHHHHHHHHHHHhCCc
Q 014571 256 ALDPQ--K-------GERILDMCAAPGGKT---TAIASLLRDEGEVVAVDRSH---NKVMDIQKLAAEMGLK 312 (422)
Q Consensus 256 ~L~p~--p-------g~~VLD~CAgpGgKT---~~la~l~~~~g~V~A~D~s~---~rl~~l~~~l~r~g~~ 312 (422)
...++ + |++||-.+| |+-. .++|..++ .+|+++|.++ .|++.++ ++|.+
T Consensus 166 ~~~~~~~~~~~~~~~g~~VlV~Ga--G~vG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~~~----~~ga~ 229 (366)
T 2cdc_A 166 QKRVPVWTCDDGTLNCRKVLVVGT--GPIGVLFTLLFRTYG--LEVWMANRREPTEVEQTVIE----ETKTN 229 (366)
T ss_dssp GGGSSCCSCTTSSSTTCEEEEESC--HHHHHHHHHHHHHHT--CEEEEEESSCCCHHHHHHHH----HHTCE
T ss_pred ccCccccccccccCCCCEEEEECC--CHHHHHHHHHHHhCC--CEEEEEeCCccchHHHHHHH----HhCCc
Confidence 45677 8 999998887 5544 44444443 4899999998 8876554 46764
No 459
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=35.22 E-value=73 Score=29.20 Aligned_cols=63 Identities=17% Similarity=0.210 Sum_probs=47.9
Q ss_pred CCCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCc--ceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLK--CITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~--nv~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...++++.+ ....+|+.+|+++.+++.+.+.++..|.. ++.++..|.+..
T Consensus 10 ~~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~ 75 (281)
T 3svt_A 10 QDRTYL-VTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNE 75 (281)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSH
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCH
Confidence 355565 5667788888888755 33468999999999999998888877653 588888898764
No 460
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=35.13 E-value=36 Score=32.44 Aligned_cols=53 Identities=9% Similarity=0.028 Sum_probs=38.3
Q ss_pred CeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhh
Q 014571 263 ERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325 (422)
Q Consensus 263 ~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 325 (422)
..|+= +|-|..+..+++.+...|.|+++|.++.+++ +++ .++.++.+|++...
T Consensus 116 ~~viI--~G~G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~-------~~~~~i~gd~~~~~ 168 (336)
T 1lnq_A 116 RHVVI--CGWSESTLECLRELRGSEVFVLAEDENVRKK-VLR-------SGANFVHGDPTRVS 168 (336)
T ss_dssp CEEEE--ESCCHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH-------TTCEEEESCTTSHH
T ss_pred CCEEE--ECCcHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh-------CCcEEEEeCCCCHH
Confidence 35553 3458888888887755555999999999988 653 24678889987643
No 461
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=34.98 E-value=63 Score=28.63 Aligned_cols=61 Identities=16% Similarity=0.124 Sum_probs=44.2
Q ss_pred CCeEEEecCCCChhHHHHHhccC-CCcEEEEE-cCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLR-DEGEVVAV-DRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~-D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
|.+|| +..|.||...++++.+. ...+|+++ ++++.+++.+.+.++..+ .++.++..|.++.
T Consensus 5 ~~~vl-ItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~ 67 (247)
T 2hq1_A 5 GKTAI-VTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG-INVVVAKGDVKNP 67 (247)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTT-CCEEEEESCTTSH
T ss_pred CcEEE-EECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcC-CcEEEEECCCCCH
Confidence 45566 66778988888887653 23588888 678788887777777665 3578888888754
No 462
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=34.87 E-value=69 Score=29.90 Aligned_cols=63 Identities=14% Similarity=0.318 Sum_probs=47.3
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCc--ceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLK--CITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~--nv~~~~~Da~~~ 324 (422)
.|.++| +..|.||...+++..+. ...+|++++++..+++.+.+.+...|.. ++.++..|.+..
T Consensus 25 ~~k~vl-VTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~ 90 (297)
T 1xhl_A 25 SGKSVI-ITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEA 90 (297)
T ss_dssp TTCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCH
Confidence 355555 67778888888887653 3468999999999998888877776642 688888898754
No 463
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=34.79 E-value=55 Score=30.17 Aligned_cols=61 Identities=15% Similarity=0.089 Sum_probs=45.7
Q ss_pred CCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
|.++| +..|.||...+++..+ ....+|++++++..+++.+.+.++..|. ++.++..|.+..
T Consensus 24 ~k~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~ 85 (279)
T 3sju_A 24 PQTAF-VTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVTST 85 (279)
T ss_dssp -CEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CEEEEECCTTCH
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCH
Confidence 55666 5667788888887655 3346899999999999998888877663 588888888754
No 464
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=34.29 E-value=70 Score=29.39 Aligned_cols=61 Identities=20% Similarity=0.256 Sum_probs=45.3
Q ss_pred CCeEEEecCCCChhHHHHHhccCC-CcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLRD-EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~~-~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
|.+|| +..|.||...+++..+.. ..+|++++++..+++.+.+.++..|. ++.++..|.+..
T Consensus 44 ~k~vl-ITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~ 105 (285)
T 2c07_A 44 NKVAL-VTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSKK 105 (285)
T ss_dssp SCEEE-EESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTCH
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC-ceeEEECCCCCH
Confidence 45566 667778888888876543 45899999999988888777766553 577888887754
No 465
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=34.00 E-value=75 Score=28.68 Aligned_cols=62 Identities=19% Similarity=0.179 Sum_probs=46.6
Q ss_pred CCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHh--CCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEM--GLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~--g~~nv~~~~~Da~~~ 324 (422)
|.++| +..|.||...++++.+. ...+|+.++++..+++.+.+.++.. +..++.++..|.+..
T Consensus 7 ~k~~l-VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 71 (250)
T 3nyw_A 7 KGLAI-ITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDC 71 (250)
T ss_dssp CCEEE-EESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCH
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCH
Confidence 44555 56677888888877652 2468999999999999998888776 335688888888764
No 466
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=33.88 E-value=39 Score=31.86 Aligned_cols=50 Identities=20% Similarity=0.203 Sum_probs=34.5
Q ss_pred hcCCCCCCeEEEecCCCChhHH---HHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 256 ALDPQKGERILDMCAAPGGKTT---AIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 256 ~L~p~pg~~VLD~CAgpGgKT~---~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
..++++|++||-.+| .|+-.. +++... ..+|+++|.++.+++.+++ +|..
T Consensus 135 ~~~~~~g~~vlV~Ga-~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~----~g~~ 187 (327)
T 1qor_A 135 TYEIKPDEQFLFHAA-AGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALK----AGAW 187 (327)
T ss_dssp TSCCCTTCEEEESST-TBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCS
T ss_pred hhCCCCCCEEEEECC-CCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCC
Confidence 457889999997763 344444 444443 3589999999999877654 5654
No 467
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=33.77 E-value=61 Score=29.41 Aligned_cols=62 Identities=15% Similarity=0.147 Sum_probs=47.2
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.++| +..|.||...++++.+- ...+|+.+|++..+++.+.+.++..| .++.++..|.+..
T Consensus 11 ~~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~ 73 (256)
T 3gaf_A 11 NDAVAI-VTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG-GKAIGLECNVTDE 73 (256)
T ss_dssp TTCEEE-ECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT-CCEEEEECCTTCH
T ss_pred CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEECCCCCH
Confidence 355555 66777888888877552 24589999999999999988888876 3578888888764
No 468
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=33.75 E-value=39 Score=32.52 Aligned_cols=50 Identities=14% Similarity=0.185 Sum_probs=34.2
Q ss_pred hcCCCCCCeEEEecCCCChh---HHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCc
Q 014571 256 ALDPQKGERILDMCAAPGGK---TTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLK 312 (422)
Q Consensus 256 ~L~p~pg~~VLD~CAgpGgK---T~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~ 312 (422)
..++++|++||-.+| .|+. +.+++... ..+|+++|.++.+++.++ ++|..
T Consensus 157 ~~~~~~g~~vlV~Ga-~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~~g~~ 209 (354)
T 2j8z_A 157 VGNVQAGDYVLIHAG-LSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAE----KLGAA 209 (354)
T ss_dssp TSCCCTTCEEEESST-TSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH----HHTCS
T ss_pred hcCCCCCCEEEEECC-ccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----HcCCc
Confidence 456889999997653 3444 44444443 358999999999987763 45754
No 469
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=33.69 E-value=88 Score=29.71 Aligned_cols=62 Identities=16% Similarity=0.020 Sum_probs=46.3
Q ss_pred CCCeEEEecCCCChhHHHHHhcc-CCCcEEEEEc-CChHHHHHHHHHHH-HhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLL-RDEGEVVAVD-RSHNKVMDIQKLAA-EMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D-~s~~rl~~l~~~l~-r~g~~nv~~~~~Da~~~ 324 (422)
.|.++| +..|.||...+++..+ ....+|+.++ ++..+++.+.+.++ ..| .++.++..|.+..
T Consensus 45 ~~k~~l-VTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~d~ 109 (328)
T 2qhx_A 45 TVPVAL-VTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNV 109 (328)
T ss_dssp CCCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSS
T ss_pred CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC-CeEEEEEeeCCCc
Confidence 355555 6778899988888765 3346899999 99999988887776 445 4688888887754
No 470
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=33.66 E-value=75 Score=29.16 Aligned_cols=63 Identities=16% Similarity=0.178 Sum_probs=45.6
Q ss_pred CCCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.++| +..|.||...++++.+ ....+|+.+|++..+++...+.+....-.++.++..|.+..
T Consensus 26 ~~k~~l-VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 89 (277)
T 4fc7_A 26 RDKVAF-ITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAP 89 (277)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCH
T ss_pred CCCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCH
Confidence 355666 5667788888888765 33458999999999988877766543224688888898764
No 471
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=33.16 E-value=74 Score=27.67 Aligned_cols=50 Identities=14% Similarity=0.180 Sum_probs=37.7
Q ss_pred eEEEecCCCChhHHHHHhccCCC-cEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhh
Q 014571 264 RILDMCAAPGGKTTAIASLLRDE-GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALK 323 (422)
Q Consensus 264 ~VLD~CAgpGgKT~~la~l~~~~-g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~ 323 (422)
+|| +..|+|+...++++.+... .+|+++++++.++..+ .++.++.+|.+.
T Consensus 2 ~il-ItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------~~~~~~~~D~~d 52 (219)
T 3dqp_A 2 KIF-IVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---------NNVKAVHFDVDW 52 (219)
T ss_dssp EEE-EESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---------TTEEEEECCTTS
T ss_pred eEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---------CCceEEEecccC
Confidence 344 5667899999998876444 5899999998765432 568899999876
No 472
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=32.90 E-value=74 Score=25.03 Aligned_cols=78 Identities=12% Similarity=0.014 Sum_probs=45.0
Q ss_pred CcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCCCC--CCCCceeecCCccc---cCc
Q 014571 286 EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDN--NYITSQTSDSMKLH---KEV 360 (422)
Q Consensus 286 ~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~--~~FD~VLvDaPCSg---~G~ 360 (422)
..+|.-+|-++...+.+++.+++.|.........++............ ..... ..||.|++|.--.+ ...
T Consensus 6 ~~~iLivdd~~~~~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~-----~~~~~~~~~~dlvi~D~~l~~~~g~~~ 80 (149)
T 1k66_A 6 TQPLLVVEDSDEDFSTFQRLLQREGVVNPIYRCITGDQALDFLYQTGS-----YCNPDIAPRPAVILLDLNLPGTDGREV 80 (149)
T ss_dssp TSCEEEECCCHHHHHHHHHHHHHTTBCSCEEEECSHHHHHHHHHTCCS-----SSCGGGCCCCSEEEECSCCSSSCHHHH
T ss_pred CccEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHHhccc-----ccCcccCCCCcEEEEECCCCCCCHHHH
Confidence 457899999999999999999999873212233344333221110000 00001 46899999975543 333
Q ss_pred hhhhhhCC
Q 014571 361 PSIAAEGL 368 (422)
Q Consensus 361 l~~lrr~p 368 (422)
+..+++++
T Consensus 81 ~~~l~~~~ 88 (149)
T 1k66_A 81 LQEIKQDE 88 (149)
T ss_dssp HHHHTTST
T ss_pred HHHHHhCc
Confidence 45566653
No 473
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=32.67 E-value=42 Score=29.66 Aligned_cols=58 Identities=12% Similarity=0.190 Sum_probs=41.0
Q ss_pred CCeEEEecCCCChhHHHHHhccCCC---cEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLRDE---GEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~~~---g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
+.+|| +..|.||...++++.+... .+|++++++..+++.+++. .-.++.++..|.+..
T Consensus 3 ~k~vl-ItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~----~~~~~~~~~~D~~~~ 63 (250)
T 1yo6_A 3 PGSVV-VTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI----KDSRVHVLPLTVTCD 63 (250)
T ss_dssp CSEEE-ESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC----CCTTEEEEECCTTCH
T ss_pred CCEEE-EecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc----cCCceEEEEeecCCH
Confidence 44555 6677889888888766433 5899999998887655432 224688888887754
No 474
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=32.62 E-value=22 Score=34.71 Aligned_cols=48 Identities=17% Similarity=0.087 Sum_probs=35.6
Q ss_pred CCCCeEEEecCCCChhH---HHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 260 QKGERILDMCAAPGGKT---TAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT---~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
++|++||=.+||.|+-. .++|..++ .+|+++|.++.|++.++ ++|.+.
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~ 219 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDG--IKLVNIVRKQEQADLLK----AQGAVH 219 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHT--CCEEEEESSHHHHHHHH----HTTCSC
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHH----hCCCcE
Confidence 78999998766766654 45555553 48999999999988776 478754
No 475
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=32.50 E-value=54 Score=30.59 Aligned_cols=87 Identities=15% Similarity=0.138 Sum_probs=56.0
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCc----EEEEEcCChHHHHHHHHHHHHhC-CcceEEEecchhhhhhccCCCCCCc
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEG----EVVAVDRSHNKVMDIQKLAAEMG-LKCITTYKLDALKAVRRKNESNDEP 335 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g----~V~A~D~s~~rl~~l~~~l~r~g-~~nv~~~~~Da~~~~~~~~~~~~~~ 335 (422)
.|.++| +..|.||...++|..+-..| .|+..+++..+++.+.+.++..+ -.++.++..|.+...........
T Consensus 32 ~~k~~l-VTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-- 108 (287)
T 3rku_A 32 AKKTVL-ITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN-- 108 (287)
T ss_dssp TTCEEE-EESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT--
T ss_pred CCCEEE-EecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH--
Confidence 355666 56677888888887653223 89999999999999888887653 24588888898764321110000
Q ss_pred cccCCCCCCCCCceeecC
Q 014571 336 NMCNSKDNNYITSQTSDS 353 (422)
Q Consensus 336 ~~~~~~~~~~FD~VLvDa 353 (422)
.....+.+|.++..|
T Consensus 109 ---~~~~~g~iD~lVnnA 123 (287)
T 3rku_A 109 ---LPQEFKDIDILVNNA 123 (287)
T ss_dssp ---SCGGGCSCCEEEECC
T ss_pred ---HHHhcCCCCEEEECC
Confidence 011234679888854
No 476
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=32.31 E-value=94 Score=24.89 Aligned_cols=77 Identities=12% Similarity=0.007 Sum_probs=45.5
Q ss_pred CcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCcc---ccCchh
Q 014571 286 EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKL---HKEVPS 362 (422)
Q Consensus 286 ~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCS---g~G~l~ 362 (422)
..+|.-+|-++...+.++..+++.|.........|+............ ......+|.|++|.--. |...++
T Consensus 8 ~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~------~~~~~~~dlillD~~lp~~~g~~l~~ 81 (149)
T 1i3c_A 8 PKVILLVEDSKADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQQQGE------YENSPRPNLILLDLNLPKKDGREVLA 81 (149)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHSCCSCEEEEEECSHHHHHHHHTTCGG------GTTCCCCSEEEECSCCSSSCHHHHHH
T ss_pred CCeEEEEECCHHHHHHHHHHHHhcCCCccEEEeCCHHHHHHHHHhccc------cccCCCCCEEEEeCCCCCCcHHHHHH
Confidence 457999999999999999999987763222233454443322110000 00013589999997443 333456
Q ss_pred hhhhCC
Q 014571 363 IAAEGL 368 (422)
Q Consensus 363 ~lrr~p 368 (422)
.+++++
T Consensus 82 ~l~~~~ 87 (149)
T 1i3c_A 82 EIKQNP 87 (149)
T ss_dssp HHHHCT
T ss_pred HHHhCc
Confidence 677764
No 477
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=32.30 E-value=75 Score=28.66 Aligned_cols=60 Identities=20% Similarity=0.191 Sum_probs=45.2
Q ss_pred CCCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecch
Q 014571 261 KGERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDA 321 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da 321 (422)
.|.++| +..|.||...+++..+ ....+|+.+|++..+++.+.+.+...+...+.++..|.
T Consensus 11 ~~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~ 71 (252)
T 3f1l_A 11 NDRIIL-VTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDL 71 (252)
T ss_dssp TTCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCT
T ss_pred CCCEEE-EeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 355555 5667788888887755 33468999999999999988888776655677888887
No 478
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=32.22 E-value=59 Score=31.00 Aligned_cols=52 Identities=21% Similarity=0.253 Sum_probs=35.3
Q ss_pred hcCCC------CCCeEEEec-CC-CChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 256 ALDPQ------KGERILDMC-AA-PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 256 ~L~p~------pg~~VLD~C-Ag-pGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
.+.++ +|++||=.+ +| -|.-+.++|..++ .+|+++|.++.|++.+++ +|...
T Consensus 139 ~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~----lGa~~ 198 (346)
T 3fbg_A 139 VFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYG--LRVITTASRNETIEWTKK----MGADI 198 (346)
T ss_dssp TSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEECCSHHHHHHHHH----HTCSE
T ss_pred hcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCcE
Confidence 45566 899999652 22 2444555666543 599999999999887764 67653
No 479
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=32.22 E-value=54 Score=31.38 Aligned_cols=69 Identities=13% Similarity=-0.021 Sum_probs=42.6
Q ss_pred cceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccccCchhhhhhCCCCCccccccCcccchhHHHHHHH
Q 014571 312 KCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLHKEVPSIAAEGLNGDKSCKEKGRTCGECGMAQEEI 391 (422)
Q Consensus 312 ~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg~G~l~~lrr~p~~~~~w~~~~~~~~~l~~~Q~~I 391 (422)
....++++|+....... ..+.||.|++|||--.... ..|.... ..++...-.+.
T Consensus 13 ~~~~ii~gD~~~~l~~l-------------~~~svDlI~tDPPY~~~~~-----------~~y~~~~--~~~~~~~l~~~ 66 (323)
T 1boo_A 13 SNGSMYIGDSLELLESF-------------PEESISLVMTSPPFALQRK-----------KEYGNLE--QHEYVDWFLSF 66 (323)
T ss_dssp SSEEEEESCHHHHGGGS-------------CSSCEEEEEECCCCSSSCS-----------CSSCSCH--HHHHHHHHHHH
T ss_pred CCceEEeCcHHHHHhhC-------------CCCCeeEEEECCCCCCCcc-----------cccCCcC--HHHHHHHHHHH
Confidence 35788999998754321 1356999999999854322 0122111 12444445566
Q ss_pred HHHhcc-ceeccEEEe
Q 014571 392 NALVVG-LRIQKVLVL 406 (422)
Q Consensus 392 L~~a~~-lr~~~~~~~ 406 (422)
|+.+.. |+.+|++++
T Consensus 67 l~~~~rvLk~~G~i~i 82 (323)
T 1boo_A 67 AKVVNKKLKPDGSFVV 82 (323)
T ss_dssp HHHHHHHEEEEEEEEE
T ss_pred HHHHHHHCcCCcEEEE
Confidence 666655 788999888
No 480
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=32.20 E-value=77 Score=28.94 Aligned_cols=62 Identities=23% Similarity=0.237 Sum_probs=45.7
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.++| +..|.||...+++..+. ...+|+++|+++.+++.+.+.++..|. ++.++..|.+..
T Consensus 20 ~~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~ 82 (273)
T 1ae1_A 20 KGTTAL-VTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSR 82 (273)
T ss_dssp TTCEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCH
T ss_pred CCCEEE-EECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCH
Confidence 355666 56677888888887653 345899999999998888777776663 578888887754
No 481
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=31.93 E-value=94 Score=27.64 Aligned_cols=82 Identities=16% Similarity=0.130 Sum_probs=52.3
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccC
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCN 339 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~ 339 (422)
++.+|| +..|.||...+++..+. ...+|+.++++..+++.+.+.+. .++.+...|.+.........
T Consensus 13 ~~k~vl-VTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~-------- 79 (249)
T 3f9i_A 13 TGKTSL-ITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEECSNLI-------- 79 (249)
T ss_dssp TTCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHH--------
T ss_pred CCCEEE-EECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHHHHHHH--------
Confidence 566777 67778888888887653 34689999999998887766542 35778888876543211100
Q ss_pred CCCCCCCCceeecCCcc
Q 014571 340 SKDNNYITSQTSDSMKL 356 (422)
Q Consensus 340 ~~~~~~FD~VLvDaPCS 356 (422)
...+.+|.++.-|--.
T Consensus 80 -~~~~~id~li~~Ag~~ 95 (249)
T 3f9i_A 80 -SKTSNLDILVCNAGIT 95 (249)
T ss_dssp -HTCSCCSEEEECCC--
T ss_pred -HhcCCCCEEEECCCCC
Confidence 0013578888855433
No 482
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=31.64 E-value=70 Score=30.95 Aligned_cols=81 Identities=16% Similarity=0.131 Sum_probs=45.1
Q ss_pred CCCCeEEEecCCCChhHHHHHh---ccCCCc--EEEEEcCChH--------HHHHHHHH-HHHhC---Ccc--eEEEecc
Q 014571 260 QKGERILDMCAAPGGKTTAIAS---LLRDEG--EVVAVDRSHN--------KVMDIQKL-AAEMG---LKC--ITTYKLD 320 (422)
Q Consensus 260 ~pg~~VLD~CAgpGgKT~~la~---l~~~~g--~V~A~D~s~~--------rl~~l~~~-l~r~g---~~n--v~~~~~D 320 (422)
++.-+|||+|-|+|--++...+ ..++.. +.+++|..+- -...+.+. ..... -.+ ..+..+|
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGD 174 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESC
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEech
Confidence 3445899999999986544332 223444 4577775321 12222222 22221 122 4677889
Q ss_pred hhhhhhccCCCCCCccccCCCCCCCCCceeecC
Q 014571 321 ALKAVRRKNESNDEPNMCNSKDNNYITSQTSDS 353 (422)
Q Consensus 321 a~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDa 353 (422)
++....... ...||.|++|+
T Consensus 175 a~~~l~~l~-------------~~~~Da~flDg 194 (308)
T 3vyw_A 175 ARKRIKEVE-------------NFKADAVFHDA 194 (308)
T ss_dssp HHHHGGGCC-------------SCCEEEEEECC
T ss_pred HHHHHhhhc-------------ccceeEEEeCC
Confidence 987654321 23589999996
No 483
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=31.64 E-value=44 Score=29.56 Aligned_cols=54 Identities=20% Similarity=0.223 Sum_probs=40.1
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcce-EEEecchh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCI-TTYKLDAL 322 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv-~~~~~Da~ 322 (422)
.|.+|| +..|+|+...++++.+. ...+|+++++++.+++.+.+ . ++ .++.+|.+
T Consensus 20 ~~~~il-VtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~---~~~~~~~~Dl~ 75 (236)
T 3e8x_A 20 QGMRVL-VVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----R---GASDIVVANLE 75 (236)
T ss_dssp -CCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----T---TCSEEEECCTT
T ss_pred CCCeEE-EECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----C---CCceEEEcccH
Confidence 366777 66778999998887653 33589999999998766543 2 46 78888987
No 484
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=31.48 E-value=60 Score=28.97 Aligned_cols=53 Identities=9% Similarity=0.001 Sum_probs=37.6
Q ss_pred CCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
..+|+=+ |-|.....+++.+...|.|+++|.++.+++.++ . ++.++.+|++..
T Consensus 9 ~~~viI~--G~G~~G~~la~~L~~~g~v~vid~~~~~~~~~~-----~---~~~~i~gd~~~~ 61 (234)
T 2aef_A 9 SRHVVIC--GWSESTLECLRELRGSEVFVLAEDENVRKKVLR-----S---GANFVHGDPTRV 61 (234)
T ss_dssp -CEEEEE--SCCHHHHHHHHHSTTSEEEEEESCGGGHHHHHH-----T---TCEEEESCTTCH
T ss_pred CCEEEEE--CCChHHHHHHHHHHhCCeEEEEECCHHHHHHHh-----c---CCeEEEcCCCCH
Confidence 3456533 447888888888766555999999999876654 2 367888998754
No 485
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=31.39 E-value=76 Score=25.72 Aligned_cols=68 Identities=16% Similarity=0.115 Sum_probs=45.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecCCccc---cCchh
Q 014571 286 EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDSMKLH---KEVPS 362 (422)
Q Consensus 286 ~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDaPCSg---~G~l~ 362 (422)
..+|.-+|-++...+.+++.+++.|+. +. ...|+........ ...||.|++|.--.+ ...+.
T Consensus 7 ~~~ILivdd~~~~~~~l~~~L~~~g~~-v~-~~~~~~~al~~l~-------------~~~~dlii~D~~l~~~~g~~~~~ 71 (154)
T 3gt7_A 7 AGEILIVEDSPTQAEHLKHILEETGYQ-TE-HVRNGREAVRFLS-------------LTRPDLIISDVLMPEMDGYALCR 71 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTCE-EE-EESSHHHHHHHHT-------------TCCCSEEEEESCCSSSCHHHHHH
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHCCCE-EE-EeCCHHHHHHHHH-------------hCCCCEEEEeCCCCCCCHHHHHH
Confidence 468999999999999999999998864 32 2334444332211 245899999975433 33446
Q ss_pred hhhhCC
Q 014571 363 IAAEGL 368 (422)
Q Consensus 363 ~lrr~p 368 (422)
.+|+.+
T Consensus 72 ~lr~~~ 77 (154)
T 3gt7_A 72 WLKGQP 77 (154)
T ss_dssp HHHHST
T ss_pred HHHhCC
Confidence 677664
No 486
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=31.33 E-value=1.2e+02 Score=27.10 Aligned_cols=62 Identities=13% Similarity=0.048 Sum_probs=45.9
Q ss_pred CCeEEEecCCCChhHHHHHhccC----CCcEEEEEcCChHHHHHHHHHHHHhC-CcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLR----DEGEVVAVDRSHNKVMDIQKLAAEMG-LKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~----~~g~V~A~D~s~~rl~~l~~~l~r~g-~~nv~~~~~Da~~~ 324 (422)
|.++| +..|.||...+++..+. ...+|+++|++..+++.+.+.++... -.++.++..|.+..
T Consensus 6 ~k~~l-VTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~ 72 (259)
T 1oaa_A 6 CAVCV-LTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTE 72 (259)
T ss_dssp SEEEE-ESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSH
T ss_pred CcEEE-EeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCH
Confidence 33444 66778888888887653 35699999999999988887776652 24588888898764
No 487
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=31.21 E-value=68 Score=28.99 Aligned_cols=61 Identities=18% Similarity=0.223 Sum_probs=42.3
Q ss_pred CCCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...+++..+ ....+|++++++..+.+.+.+.+.. ..++.++.+|.+..
T Consensus 15 ~~k~vl-ITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~ 76 (278)
T 2bgk_A 15 QDKVAI-ITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS--PDVISFVHCDVTKD 76 (278)
T ss_dssp TTCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCH
T ss_pred cCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC--CCceEEEECCCCCH
Confidence 355666 6677888888888755 2346899999998877665544321 12688888998754
No 488
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=31.21 E-value=1.3e+02 Score=27.30 Aligned_cols=62 Identities=13% Similarity=0.211 Sum_probs=47.2
Q ss_pred CCCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.++| +..|.||...+++..+ ....+|+.+|++..+++.+.+.++..| .++.++..|.+..
T Consensus 10 ~~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~ 72 (264)
T 3ucx_A 10 TDKVVV-ISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG-RRALSVGTDITDD 72 (264)
T ss_dssp TTCEEE-EESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCH
T ss_pred CCcEEE-EECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCH
Confidence 466666 5666777777777655 334689999999999999998888776 3588888898764
No 489
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=30.60 E-value=45 Score=32.01 Aligned_cols=54 Identities=9% Similarity=0.063 Sum_probs=36.3
Q ss_pred HhcCCCCC------CeEEEecCCC-ChhH-HHHH-hccCCCcEEEEEcCChH---HHHHHHHHHHHhCCcc
Q 014571 255 HALDPQKG------ERILDMCAAP-GGKT-TAIA-SLLRDEGEVVAVDRSHN---KVMDIQKLAAEMGLKC 313 (422)
Q Consensus 255 ~~L~p~pg------~~VLD~CAgp-GgKT-~~la-~l~~~~g~V~A~D~s~~---rl~~l~~~l~r~g~~n 313 (422)
..+.+++| ++||=.+||+ |.-+ .++| ..++ ..+|+++|.++. |++.++ ++|.+.
T Consensus 160 ~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~G-a~~Vi~~~~~~~~~~~~~~~~----~lGa~~ 225 (357)
T 2b5w_A 160 EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKG-YENLYCLGRRDRPDPTIDIIE----ELDATY 225 (357)
T ss_dssp HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTC-CCEEEEEECCCSSCHHHHHHH----HTTCEE
T ss_pred HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcC-CcEEEEEeCCcccHHHHHHHH----HcCCcc
Confidence 34457889 9999998743 3334 5555 5442 224999999998 887664 578643
No 490
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=30.57 E-value=49 Score=31.67 Aligned_cols=55 Identities=18% Similarity=0.242 Sum_probs=36.7
Q ss_pred cCCCCC-CeEEEecC--CCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 257 LDPQKG-ERILDMCA--APGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 257 L~p~pg-~~VLD~CA--gpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
.++++| ++||=.+| +-|.-+.++|..++ .+|+++..+..++...++.++++|.+.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~~~~~~~~~~~~lGa~~ 219 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLN--FNSISVIRDRPNLDEVVASLKELGATQ 219 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHT--CEEEEEECCCTTHHHHHHHHHHHTCSE
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCC--CEEEEEecCccccHHHHHHHHhcCCeE
Confidence 478899 99997654 23445666676653 578888777666544445567788754
No 491
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=30.56 E-value=51 Score=29.06 Aligned_cols=57 Identities=18% Similarity=0.136 Sum_probs=40.4
Q ss_pred CCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
+.+|| +..|.||...+++..+. ...+|++++++..+++.+.+.+ + ++.++..|.+..
T Consensus 5 ~k~vl-VtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~D~~~~ 62 (234)
T 2ehd_A 5 KGAVL-ITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL---E--GALPLPGDVREE 62 (234)
T ss_dssp CCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---T--TCEEEECCTTCH
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---h--hceEEEecCCCH
Confidence 34555 67788999988887653 3458999999988877665432 2 577788887753
No 492
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=30.56 E-value=76 Score=29.52 Aligned_cols=62 Identities=24% Similarity=0.168 Sum_probs=45.9
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...+++..+- ...+|+++|+++.+++.+.+.++..|. ++.++..|.+..
T Consensus 33 ~~k~vl-VTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~ 95 (291)
T 3cxt_A 33 KGKIAL-VTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGI-NAHGYVCDVTDE 95 (291)
T ss_dssp TTCEEE-EETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCH
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEecCCCH
Confidence 355666 66677888888887553 345899999999998888877776663 477888887754
No 493
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=30.55 E-value=39 Score=33.86 Aligned_cols=51 Identities=22% Similarity=0.179 Sum_probs=36.7
Q ss_pred cCCCCCCeEEEecC-C-CChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcc
Q 014571 257 LDPQKGERILDMCA-A-PGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKC 313 (422)
Q Consensus 257 L~p~pg~~VLD~CA-g-pGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~n 313 (422)
.++++|++||=.+| | -|.-+.++|..++ .+|++++.++.|++.++ ++|...
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~G--a~vi~~~~~~~~~~~~~----~lGa~~ 276 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGG--ANPICVVSSPQKAEICR----AMGAEA 276 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH----HHTCCE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CeEEEEECCHHHHHHHH----hhCCcE
Confidence 57889999997665 2 3445566666653 58999999999988764 478753
No 494
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=30.55 E-value=78 Score=28.12 Aligned_cols=59 Identities=15% Similarity=0.204 Sum_probs=41.6
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcce-EEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCI-TTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv-~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...+++..+. ...+|++++++..+++.+.+.+ + .++ .++.+|.+..
T Consensus 10 ~~k~vl-ITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~~D~~~~ 70 (254)
T 2wsb_A 10 DGACAA-VTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---G-AAVAARIVADVTDA 70 (254)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G-GGEEEEEECCTTCH
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---c-ccceeEEEEecCCH
Confidence 355666 56777888888887653 3458999999998877665544 3 245 7788887654
No 495
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=30.49 E-value=61 Score=32.81 Aligned_cols=58 Identities=17% Similarity=0.192 Sum_probs=46.2
Q ss_pred CCCeEEEecCCCChhHHHHHhccCCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLRDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAV 325 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 325 (422)
+-.+|+ =+|-|..+..+|+.+.+...|.-+|.++.|++.+.+. +++..++++|++...
T Consensus 234 ~~~~v~--I~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~-----l~~~~Vi~GD~td~~ 291 (461)
T 4g65_A 234 PYRRIM--IVGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEE-----LENTIVFCGDAADQE 291 (461)
T ss_dssp CCCEEE--EECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHH-----CTTSEEEESCTTCHH
T ss_pred cccEEE--EEcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHH-----CCCceEEeccccchh
Confidence 345665 4566777888999888888999999999999998875 356789999998754
No 496
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=30.48 E-value=1.3e+02 Score=27.38 Aligned_cols=62 Identities=23% Similarity=0.208 Sum_probs=45.6
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcC-ChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~-s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...+++..+. ...+|+.+++ +..+.+.+.+.++..|. ++.++..|.+..
T Consensus 28 ~~k~vl-ITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~ 91 (271)
T 4iin_A 28 TGKNVL-ITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGY-KAAVIKFDAASE 91 (271)
T ss_dssp SCCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCH
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCCCCH
Confidence 455666 67777888888887653 3458999998 67777888888877764 578888887754
No 497
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=30.43 E-value=76 Score=29.64 Aligned_cols=69 Identities=14% Similarity=0.090 Sum_probs=48.8
Q ss_pred CcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhhhhccCCCCCCccccCCCCCCCCCceeecC--C--ccccCch
Q 014571 286 EGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKAVRRKNESNDEPNMCNSKDNNYITSQTSDS--M--KLHKEVP 361 (422)
Q Consensus 286 ~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~~~~~~~~~~~~~~~~~~~FD~VLvDa--P--CSg~G~l 361 (422)
..+|..+|-++.-...++..+++.|+. +.....|+........ ...||.||+|. | .+|...+
T Consensus 160 ~~rILvVdD~~~~~~~l~~~L~~~g~~-v~~~a~~g~eAl~~~~-------------~~~~dlvl~D~~MPd~mdG~e~~ 225 (286)
T 3n0r_A 160 ATEVLIIEDEPVIAADIEALVRELGHD-VTDIAATRGEALEAVT-------------RRTPGLVLADIQLADGSSGIDAV 225 (286)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHH-------------HCCCSEEEEESCCTTSCCTTTTT
T ss_pred CCcEEEEcCCHHHHHHHHHHhhccCce-EEEEeCCHHHHHHHHH-------------hCCCCEEEEcCCCCCCCCHHHHH
Confidence 358999999999999999999999974 3224556665543221 23489999997 4 5666666
Q ss_pred hhhhhCC
Q 014571 362 SIAAEGL 368 (422)
Q Consensus 362 ~~lrr~p 368 (422)
..+|+.+
T Consensus 226 ~~ir~~~ 232 (286)
T 3n0r_A 226 KDILGRM 232 (286)
T ss_dssp HHHHHHT
T ss_pred HHHHhcC
Confidence 6666655
No 498
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=30.32 E-value=47 Score=30.69 Aligned_cols=61 Identities=18% Similarity=0.141 Sum_probs=44.2
Q ss_pred CCCeEEEecCCCChhHHHHHhccC-CCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 261 KGERILDMCAAPGGKTTAIASLLR-DEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 261 pg~~VLD~CAgpGgKT~~la~l~~-~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
.|.+|| +..|.||...+++..+. ...+|+++|++..+++.+.+.++..| ++.++..|.++.
T Consensus 28 ~~k~vl-VTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~ 89 (276)
T 2b4q_A 28 AGRIAL-VTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPADLSSE 89 (276)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS--CEEECCCCTTSH
T ss_pred CCCEEE-EeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--ceEEEEeeCCCH
Confidence 355666 56677888888887653 34689999999998887776665444 678888887754
No 499
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=30.28 E-value=77 Score=29.43 Aligned_cols=61 Identities=16% Similarity=0.132 Sum_probs=47.0
Q ss_pred CCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcCChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLL-RDEGEVVAVDRSHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
|.++| +..|.+|....+|..+ ....+|+.+|++..+++...+.++..|. ++.++..|.++.
T Consensus 9 gKval-VTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~ 70 (255)
T 4g81_D 9 GKTAL-VTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDE 70 (255)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCH
Confidence 54555 5667777888887765 3356999999999999999998888874 577888888764
No 500
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=30.20 E-value=90 Score=27.88 Aligned_cols=61 Identities=15% Similarity=0.210 Sum_probs=45.2
Q ss_pred CCeEEEecCCCChhHHHHHhcc-CCCcEEEEEcC-ChHHHHHHHHHHHHhCCcceEEEecchhhh
Q 014571 262 GERILDMCAAPGGKTTAIASLL-RDEGEVVAVDR-SHNKVMDIQKLAAEMGLKCITTYKLDALKA 324 (422)
Q Consensus 262 g~~VLD~CAgpGgKT~~la~l~-~~~g~V~A~D~-s~~rl~~l~~~l~r~g~~nv~~~~~Da~~~ 324 (422)
|.+|| +..|.||...+++..+ ....+|+++++ +..+++.+.+.++..+ .++.++..|.+..
T Consensus 7 ~k~vl-ITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~ 69 (261)
T 1gee_A 7 GKVVV-ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG-GEAIAVKGDVTVE 69 (261)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CEEEEEECCTTSH
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC-CceEEEECCCCCH
Confidence 45565 6677888888888755 23468999999 8888888877777665 3578888887754
Done!