Your job contains 1 sequence.
>014573
MALISFPRFLSRPLESNHRRSLRSRYKCVCCVSPTAAATSKGRSGSAVIWFKQDLRVDDH
LGLVAASKYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVE
NVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKN
LNDLPVSHNEFRKLQRPLTSPILPPTLAGAKLEADWGPLPTFDELKEFVNENPWKLEESW
TLINNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNA
LQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYEAIKFE
KERNAGFLSPFGYSAATIAAAADAVCSMEWYWLMSLRSLRSNEGVYSTRIWRWNGYQIQV
HS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014573
(422 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2122654 - symbol:AT4G25290 species:3702 "Arabi... 1141 9.1e-116 1
TAIR|locus:2061961 - symbol:PHR2 "photolyase/blue-light r... 185 6.0e-12 2
ZFIN|ZDB-GENE-040617-2 - symbol:cry-dash "cryptochrome DA... 150 1.3e-10 2
TIGR_CMR|CBU_1176 - symbol:CBU_1176 "deoxyribodipyrimidin... 136 5.6e-06 1
UNIPROTKB|F1P5X2 - symbol:LOC395100 "Uncharacterized prot... 134 1.2e-05 1
UNIPROTKB|Q2TV23 - symbol:LOC395100 "Cryptochrome-like pr... 130 3.1e-05 1
ZFIN|ZDB-GENE-010426-7 - symbol:cry4 "cryptochrome 4" spe... 125 0.00013 1
TAIR|locus:2093217 - symbol:UVR3 "UV REPAIR DEFECTIVE 3" ... 124 0.00015 1
>TAIR|locus:2122654 [details] [associations]
symbol:AT4G25290 species:3702 "Arabidopsis thaliana"
[GO:0003913 "DNA photolyase activity" evidence=IEA;ISS] [GO:0006281
"DNA repair" evidence=IEA;ISS] InterPro:IPR006050
InterPro:IPR000073 Pfam:PF00875 EMBL:CP002687 GO:GO:0006281
PRINTS:PR00111 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913
SUPFAM:SSF52425 IPI:IPI00518108 RefSeq:NP_194259.4 UniGene:At.44762
ProteinModelPortal:F4JSJ6 SMR:F4JSJ6 PRIDE:F4JSJ6
EnsemblPlants:AT4G25290.1 GeneID:828632 KEGG:ath:AT4G25290
OMA:VHGFGAF Uniprot:F4JSJ6
Length = 692
Score = 1141 (406.7 bits), Expect = 9.1e-116, P = 9.1e-116
Identities = 224/419 (53%), Positives = 292/419 (69%)
Query: 1 MALISFPRFLSRPLESNHRRSLRSRYKCVCCVSPTAAATSKGRSGSAVIWFKQDLRVDDH 60
MA ++ P FL L N R++ +C CC+S +AT++G +AV+WFK DLRVDDH
Sbjct: 1 MAFLALPHFLHLRLRRNDRKN-----RCKCCLS---SATNEG--STAVVWFKHDLRVDDH 50
Query: 61 LGLVAASKYQAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVE 120
GL+AASK++AV+PLYV D RILSRY+ + LEL I ALEDLRK+LK+QGS+LM+R+G E
Sbjct: 51 PGLLAASKHRAVIPLYVLDRRILSRYTTDTLELAIIALEDLRKTLKKQGSNLMLRYGNAE 110
Query: 121 NVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKN 180
NVI +LV+EV+A VF EEEVEYHL +++ V L VSL P+I W+TPFY+ +N
Sbjct: 111 NVIEDLVKEVRAPFVFVEEEVEYHLCEVLDAVKNKLEGVSLSGESPRIVAWRTPFYESQN 170
Query: 181 LNDLPVSHNEFRKLQRPLTSPILPPTLAGAKLEADWGPLPTFDELKEFVNENPWKLEESW 240
L DLP S EF+KL+ PLT P+ + E WG +PT D+LK+++ E+ W++E SW
Sbjct: 171 LTDLPQSWEEFKKLKLPLTLPVPAAKFSSPGSELQWGSVPTLDDLKDYLKESLWEIENSW 230
Query: 241 TLINNMSAETILTDKLSKLGKRSKRNLNNQHSPRKRLDKSFFVTDKGNTVGGGTNAVLNA 300
+ SAE +L ++L L + S + + S K++D S FVT K +TVGGG VLNA
Sbjct: 231 REMAQASAERVLMERLGNLKESSMEPIVDG-SLGKKVDNSVFVTSKRDTVGGGNEVVLNA 289
Query: 301 LQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLGIISRRGVHYEAIKFE 360
L YLRYLEGT RDDWQE+ +LR+AE+R GASF LFGP LCLGI+SRR VHYEAI++E
Sbjct: 290 LAGYLRYLEGTSRDDWQEVHARLRDAETRPGASFFKLFGPVLCLGIVSRRSVHYEAIEYE 349
Query: 361 KERNAGFLSPFGYSXXXXXXXXXXVCSMEWYWLMSLRSLRSNEGVYSTRIWRWNGYQIQ 419
KERNAGF+SPFGYS VCSMEWY+L++L R +E ++ RIWRW GY IQ
Sbjct: 350 KERNAGFISPFGYSAATVSAATDAVCSMEWYYLLALSRERIDEKRHAIRIWRWKGYLIQ 408
>TAIR|locus:2061961 [details] [associations]
symbol:PHR2 "photolyase/blue-light receptor 2"
species:3702 "Arabidopsis thaliana" [GO:0003913 "DNA photolyase
activity" evidence=IEA;NAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006281 "DNA repair" evidence=IEA;ISS] [GO:0000023 "maltose
metabolic process" evidence=RCA] [GO:0006655 "phosphatidylglycerol
biosynthetic process" evidence=RCA] [GO:0016117 "carotenoid
biosynthetic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006281
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:AC002535 eggNOG:COG0415 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 EMBL:AF053366 EMBL:AY087383
IPI:IPI00547753 PIR:T00425 RefSeq:NP_182281.1 UniGene:At.10721
UniGene:At.69338 ProteinModelPortal:Q8LB72 SMR:Q8LB72 STRING:Q8LB72
PaxDb:Q8LB72 PRIDE:Q8LB72 EnsemblPlants:AT2G47590.1 GeneID:819372
KEGG:ath:AT2G47590 GeneFarm:2668 TAIR:At2g47590
HOGENOM:HOG000240044 InParanoid:Q8LB72 OMA:TNWLMFE PhylomeDB:Q8LB72
ProtClustDB:CLSN2683619 Genevestigator:Q8LB72 GermOnline:AT2G47590
Uniprot:Q8LB72
Length = 447
Score = 185 (70.2 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 56/178 (31%), Positives = 100/178 (56%)
Query: 32 VSPTAAATSKGRSGSAVIWFKQDLRVDDHLGLVAAS-KYQAVVPLYVFDHRILSRYSNEM 90
V P++AA + +AV+WF+ DLRV D+ L +A+ + +V+P+Y FD R + S+
Sbjct: 105 VDPSSAAALRR---AAVVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGF 161
Query: 91 -------LELVIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEY 143
+ +I ++ +LRK+L+ +GS+L++R G+ E V+ EL +E+ A +V+A EV +
Sbjct: 162 DKTGPFRAQFLIESVSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSH 221
Query: 144 HLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDIKNL----NDLPVSHNEFR-KLQR 196
+ + ET K V+ K W + Y + +L DLP ++ F+ K+Q+
Sbjct: 222 DEVKAEGKI-ETAMKEEGVEVK---YFWGSTLYHLDDLPFKIEDLPSNYGAFKDKVQK 275
Score = 45 (20.9 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 286 KGNTVGGGTNAVLNALQAYLRYLEGTVRDDWQELQEKLRNAESRDGASFATLFGPALCLG 345
K VGG T A L L+++ + + +K N S GA+F+ P L +G
Sbjct: 321 KPTMVGGETEA-LTRLKSFAADCQARLSKG----NQKGGN-NSVFGANFSCKISPWLAMG 374
Query: 346 IISRRGVHYEAIK 358
IS R + ++ +K
Sbjct: 375 SISPRSM-FDELK 386
>ZFIN|ZDB-GENE-040617-2 [details] [associations]
symbol:cry-dash "cryptochrome DASH" species:7955
"Danio rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IDA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IDA] [GO:0000719 "photoreactive repair"
evidence=IDA] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 ZFIN:ZDB-GENE-040617-2 GO:GO:0050660 GO:GO:0003684
GO:GO:0000719 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0003904
InterPro:IPR014133 TIGRFAMs:TIGR02765 EMBL:BX247944 IPI:IPI00495554
Ensembl:ENSDART00000139329 ArrayExpress:F1R5N7 Bgee:F1R5N7
Uniprot:F1R5N7
Length = 521
Score = 150 (57.9 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 55/202 (27%), Positives = 97/202 (48%)
Query: 44 SGSAVIWFKQDLRV-DDHLGLVAASKYQAVVPLYVFDHR-ILSRYSNEM-------LELV 94
S + + + DLR+ D+ + A + ++PLY FD R Y L +
Sbjct: 5 SRTVICLLRNDLRLHDNEVFHWAQRNAEHIIPLYCFDPRHYQGTYHYNFPKTGPFRLRFL 64
Query: 95 IFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFA-EEEVEYHLRQMMAIVD 153
+ +++DLR LK+ GS L++R G+ E+V+ EL++++ + S A EEV + V+
Sbjct: 65 LDSVKDLRALLKKHGSTLLVRQGKPEDVVCELIKQLGSVSTVAFHEEVASEEKS----VE 120
Query: 154 ETLAKVSLVDGKPKI-CLWQTPFY---DI--KNLNDLPVSHNEFRKL--QRPLTSPIL-- 203
E L ++ K ++ W + Y D+ ++ LP + +FRK + P+L
Sbjct: 121 EKLKEICC-QNKVRVQTFWGSTLYHRDDLPFSHIGGLPDVYTQFRKAVEAQGRVRPVLST 179
Query: 204 PPTLAGAKLEADWGPLPTFDEL 225
P + + GP+PTFD L
Sbjct: 180 PEQVKSPPSGLEEGPIPTFDSL 201
Score = 73 (30.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 331 GASFATLFGPALCLGIISRRGVHYEAIKFEKERNA 365
G F+T F P L LG IS R ++ + K+E ER A
Sbjct: 249 GVDFSTKFSPWLALGCISPRYIYEQIKKYEVERTA 283
>TIGR_CMR|CBU_1176 [details] [associations]
symbol:CBU_1176 "deoxyribodipyrimidine photolyase - class
I" species:227377 "Coxiella burnetii RSA 493" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669
GO:GO:0003904 RefSeq:NP_820171.1 HSSP:P00914
ProteinModelPortal:Q83CE4 GeneID:1209079 KEGG:cbu:CBU_1176
PATRIC:17931093 ProtClustDB:CLSK2394345
BioCyc:CBUR227377:GJ7S-1162-MONOMER Uniprot:Q83CE4
Length = 472
Score = 136 (52.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 30/117 (25%), Positives = 64/117 (54%)
Query: 46 SAVIWFKQDLRVDDHLGLVAASKY-QAVVPLYVFDHRILSRYSNEMLELVIFALEDLRKS 104
+ + WF+QDLR+ D+ LV A+K ++PLY+ D + L + + +L L+ +
Sbjct: 2 TTIFWFRQDLRLSDNPALVEAAKSADHLIPLYILDDQ-LKMLGDAQRWWLHHSLSSLQTA 60
Query: 105 LKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSL 161
L ++G+ L+++ G + V+ EL+++ K ++ E R++ ++ L +S+
Sbjct: 61 LSKKGTSLILKKGDTKRVLLELIKKYKVEKIYWNRSYEPPYREIDTYLENRLPPLSV 117
>UNIPROTKB|F1P5X2 [details] [associations]
symbol:LOC395100 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
IPI:IPI00821352 Ensembl:ENSGALT00000040673 OMA:WTASEEE
ArrayExpress:F1P5X2 Uniprot:F1P5X2
Length = 547
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/122 (31%), Positives = 67/122 (54%)
Query: 34 PTAAATSKGRSGSAVIW-FKQDLRVDDHLGLVAASKYQAVV-PLYVFDHRIL--SRYSNE 89
P ++GR I F++ LR+ D+ L+AA + VV P+Y+ D + S +
Sbjct: 9 PPTPPPAQGRMRHRTIHLFRKGLRLHDNPALLAALQSSEVVYPVYILDRAFMTSSMHIGA 68
Query: 90 ML-ELVIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQM 148
+ ++ +LEDLR SL++ GS L++ G E+V+R+ V++ T V + E+E ++M
Sbjct: 69 LRWHFLLQSLEDLRSSLRQLGSCLLVIQGEYESVVRDHVQKWNITQVTLDAEMEPFYKEM 128
Query: 149 MA 150
A
Sbjct: 129 EA 130
>UNIPROTKB|Q2TV23 [details] [associations]
symbol:LOC395100 "Cryptochrome-like protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
EMBL:AY300013 IPI:IPI00782853 RefSeq:NP_001034685.1
UniGene:Gga.5544 Ensembl:ENSGALT00000000143 GeneID:395100
KEGG:gga:395100 InParanoid:Q2TV23 OrthoDB:EOG479F6W
NextBio:20815193 Uniprot:Q2TV23
Length = 529
Score = 130 (50.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 34/104 (32%), Positives = 61/104 (58%)
Query: 51 FKQDLRVDDHLGLVAASKYQAVV-PLYVFDHRIL--SRYSNEML-ELVIFALEDLRKSLK 106
F++ LR+ D+ L+AA + VV P+Y+ D + S + + ++ +LEDLR SL+
Sbjct: 9 FRKGLRLHDNPALLAALQSSEVVYPVYILDRAFMTSSMHIGALRWHFLLQSLEDLRSSLR 68
Query: 107 EQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMA 150
+ GS L++ G E+V+R+ V++ T V + E+E ++M A
Sbjct: 69 QLGSCLLVIQGEYESVVRDHVQKWNITQVTLDAEMEPFYKEMEA 112
>ZFIN|ZDB-GENE-010426-7 [details] [associations]
symbol:cry4 "cryptochrome 4" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009881 "photoreceptor
activity" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-7
GO:GO:0006281 GO:GO:0009881 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 EMBL:FP085425 IPI:IPI00995476
Ensembl:ENSDART00000126053 Uniprot:E7F1Z7
Length = 582
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 46/165 (27%), Positives = 82/165 (49%)
Query: 51 FKQDLRVDDHLGLVAA-SKYQAVVPLYVFDHRILSRYSNEMLEL----VIFALEDLRKSL 105
F++ LR+ D+ L+ A + A+ P+YV D R+ + + M L ++ +LEDL L
Sbjct: 30 FRKGLRLHDNPSLLGALASSSALYPVYVLD-RVFLQGAMHMGALRWRFLLQSLEDLDTRL 88
Query: 106 KEQGSDLMIRFGRVENVIRELVEEVKATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDG- 164
+ GS L + G N++RELV + T + + EVE + +M D+ + V+ +G
Sbjct: 89 QAIGSRLFVLCGSTANILRELVAQWGITQISYDTEVEPYYTRM----DKDIQTVAQENGL 144
Query: 165 KPKICLWQTPFYDIKNL-----NDLPVSHNEFRKLQRPLTSPILP 204
+ C+ T YD+K + P+++ +F + L P P
Sbjct: 145 QTYTCVSHT-LYDVKRIVKANGGSPPLTYKKFLHVLSVLGEPEKP 188
>TAIR|locus:2093217 [details] [associations]
symbol:UVR3 "UV REPAIR DEFECTIVE 3" species:3702
"Arabidopsis thaliana" [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISS;IDA]
[GO:0009411 "response to UV" evidence=IMP] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050
Pfam:PF00875 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009411
GO:GO:0000166 GO:GO:0003677 GO:GO:0006281 EMBL:AB017071
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AB003687 EMBL:AB017331 IPI:IPI00545198
IPI:IPI00657032 RefSeq:NP_001030703.1 RefSeq:NP_566520.1
UniGene:At.188 PDB:3FY4 PDBsum:3FY4 ProteinModelPortal:O48652
SMR:O48652 STRING:O48652 EnsemblPlants:AT3G15620.1 GeneID:820804
KEGG:ath:AT3G15620 GeneFarm:1941 TAIR:At3g15620 InParanoid:O48652
OMA:CLSARTF PhylomeDB:O48652 ProtClustDB:CLSN2688412
BioCyc:MetaCyc:MONOMER-15021 EvolutionaryTrace:O48652
Genevestigator:O48652 GO:GO:0003914 Uniprot:O48652
Length = 556
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 57/229 (24%), Positives = 101/229 (44%)
Query: 28 CVCCVSPTA----AATSKGRSGSAVIWFKQDLRVDDHLGLVAASK-YQAVVPLYVFDHRI 82
CVC SP++ TS ++IWF++ LRV D+ L ASK + + P++V D
Sbjct: 5 CVC--SPSSYRLNPITSMATGSGSLIWFRKGLRVHDNPALEYASKGSEFMYPVFVIDPHY 62
Query: 83 L-----------SRYSNEMLELVIFALEDLRKSLKEQGSDLMIRFGRVENVIRELVEEVK 131
+ SR + ++ +L+DL SLK+ GS L++ G V+ ++E K
Sbjct: 63 MESDPSAFSPGSSRAGVNRIRFLLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWK 122
Query: 132 ATSVFAEEEVEYHLRQMMAIVDETLAKVSLVDGKPKICLWQTPFYDI-KNLNDLPVSHNE 190
+ E + + + + + V + + + P P + I KN P+S+
Sbjct: 123 VKRLCFEYDTDPYYQALDVKVKDYASSTGVEVFSPVSHTLFNPAHIIEKNGGKPPLSYQS 182
Query: 191 FRKLQRPLTSPILPPTLAGAKLEADWGPLPTFDELKEF-VNENPWKLEE 238
F K+ P+ A ++L + LP ++ ++E P LEE
Sbjct: 183 FLKVAGE-------PSCAKSELVMSYSSLPPIGDIGNLGISEVP-SLEE 223
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 422 412 0.00080 118 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 625 (66 KB)
Total size of DFA: 278 KB (2145 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.81u 0.10s 36.91t Elapsed: 00:00:03
Total cpu time: 36.81u 0.10s 36.91t Elapsed: 00:00:03
Start: Sat May 11 06:23:27 2013 End: Sat May 11 06:23:30 2013