BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014581
(422 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449439483|ref|XP_004137515.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit
PreA-like [Cucumis sativus]
gi|449520940|ref|XP_004167490.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit
PreA-like [Cucumis sativus]
Length = 424
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/424 (85%), Positives = 393/424 (92%), Gaps = 2/424 (0%)
Query: 1 MASLNLNQIISNSN-TSFAVN-RRPGLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPN 58
MAS NL Q + S T+ A+N R GL P+R+G RV+AS A AEPDLS+TVNGL MPN
Sbjct: 1 MASFNLTQFRTKSPITNLALNPSRTGLTRPTRLGFRVVASGGAQAEPDLSVTVNGLNMPN 60
Query: 59 PFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQ 118
PFVIGSGPPGTNYTVMKRAFDEGWGAV+AKTVSLDAAKVINVTPRYARLRA +NGSAKGQ
Sbjct: 61 PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ 120
Query: 119 IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGID 178
IIGWENIELISDRPLE MLKEFKQLK YPD+ILIASIMEEYNKAAWEELIDRVE+TG+D
Sbjct: 121 IIGWENIELISDRPLEIMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180
Query: 179 AIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARV 238
A E+NFSCPHGMPER+MGAAVGQDC LLEEVCGWINAKAT+PVWAKMTPNITDI++PARV
Sbjct: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARV 240
Query: 239 ALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM 298
AL+SG EG++AINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS KAVHPIALGKV+SIAKM
Sbjct: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM 300
Query: 299 MKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFM 358
MK+EFND DYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG+VK+LC EL+DFM
Sbjct: 301 MKAEFNDGDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGVVKKLCAELQDFM 360
Query: 359 KMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLS 418
K+HNFSSIEDFRGAS+ YFTTHT+LVR Q+EAI+QRKAV+KGLQSDKDWTGDGFVKET S
Sbjct: 361 KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 420
Query: 419 MVSN 422
MVSN
Sbjct: 421 MVSN 424
>gi|225456230|ref|XP_002283095.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit
PreA [Vitis vinifera]
Length = 421
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/423 (86%), Positives = 389/423 (91%), Gaps = 3/423 (0%)
Query: 1 MASLNLNQIISN-SNTSFAVNRRPGLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNP 59
MASL+ + I + S F RR L PSR+ RV AS+ AEPDLS+TVNGL MPNP
Sbjct: 1 MASLSFSPIRAKPSGGDFRPFRRQSLARPSRVAFRVFASE-GQAEPDLSVTVNGLHMPNP 59
Query: 60 FVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQI 119
FVIGSGPPGTNYTVMKRAFDEGWGAV+AKTVSLDAAKVINVTPRYARLR GANGSAKGQI
Sbjct: 60 FVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRVGANGSAKGQI 119
Query: 120 IGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDA 179
IGWENIELISDRPLETMLKEFKQLK YPD+ILIASIMEEY+KAAWEELIDRVE+TGIDA
Sbjct: 120 IGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYDKAAWEELIDRVEQTGIDA 179
Query: 180 IEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVA 239
+E+NFSCPHGMPERKMGAAVGQDC LLEEVCGWINAKATVPVWAKMTPNITDIT+PARVA
Sbjct: 180 LEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVWAKMTPNITDITQPARVA 239
Query: 240 LRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMM 299
L SG EGVSAINTIMSVMGI+L TLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMM
Sbjct: 240 LSSGCEGVSAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMM 299
Query: 300 KSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMK 359
K+EF + DYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVK+LC ELKDFMK
Sbjct: 300 KAEFGE-DYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCSELKDFMK 358
Query: 360 MHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLSM 419
MHNFSSIEDFRGAS+EYFTTHT+LV+ QQEAI+QRKA+R+GLQSDKDWTGDGFVKE+ SM
Sbjct: 359 MHNFSSIEDFRGASLEYFTTHTDLVQRQQEAIRQRKAIRQGLQSDKDWTGDGFVKESESM 418
Query: 420 VSN 422
VSN
Sbjct: 419 VSN 421
>gi|224125864|ref|XP_002329736.1| predicted protein [Populus trichocarpa]
gi|222870644|gb|EEF07775.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/425 (86%), Positives = 392/425 (92%), Gaps = 3/425 (0%)
Query: 1 MASLNLNQII-SNSNTSFAVNRRPGLRLPSRIG-LRVLASDSAS-AEPDLSITVNGLQMP 57
MASL+L QI SNS T F R R S+IG L+V+ S + EPDLS+TVNGL MP
Sbjct: 1 MASLSLTQIRGSNSVTEFTRLRLKTQRGRSKIGFLKVVGSQGQNQGEPDLSVTVNGLHMP 60
Query: 58 NPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKG 117
NPFVIGSGPPGTNYTVMKRAFDEGWGAV+AKTVSLDAAKVINVTPRYARLRAGANGSAKG
Sbjct: 61 NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRAGANGSAKG 120
Query: 118 QIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGI 177
QIIGWENIELISDRPLETMLKEFKQLK YPD+ILIASIMEEYNKAAWEELIDRVE+TGI
Sbjct: 121 QIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGI 180
Query: 178 DAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPAR 237
DA+E+NFSCPHGMPERKMGAAVGQDC LLEEVCGWINAKATVPVWAKMTPNITDIT+PAR
Sbjct: 181 DALEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVWAKMTPNITDITQPAR 240
Query: 238 VALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAK 297
V+L+SG EGV+AINTIMSVMGI+LKTLRPEPCVEGYSTPGGYS KAVHPIALGKVMSIAK
Sbjct: 241 VSLKSGCEGVAAINTIMSVMGINLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVMSIAK 300
Query: 298 MMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDF 357
MMKSEF+ + YSLSGIGGVETG DAAEFIL+GANTVQVCTGVMMHGYGLVK+LC+ELKDF
Sbjct: 301 MMKSEFDLEQYSLSGIGGVETGSDAAEFILVGANTVQVCTGVMMHGYGLVKKLCDELKDF 360
Query: 358 MKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETL 417
MKMHNFSSIEDFRGAS+EYFTTH +LVR QQEAIQQRKA++KGLQSDKDWTGDGFVKET
Sbjct: 361 MKMHNFSSIEDFRGASLEYFTTHMDLVRRQQEAIQQRKAIKKGLQSDKDWTGDGFVKETE 420
Query: 418 SMVSN 422
SMVSN
Sbjct: 421 SMVSN 425
>gi|147770516|emb|CAN75682.1| hypothetical protein VITISV_038955 [Vitis vinifera]
Length = 401
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/402 (88%), Positives = 379/402 (94%), Gaps = 2/402 (0%)
Query: 21 RRPGLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDE 80
++ L PSR+ RV AS+ AEPDLS+TVNGL MPNPFVIGSGPPGTNYTVMKRAFDE
Sbjct: 2 KKQSLARPSRVAFRVFASE-GQAEPDLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDE 60
Query: 81 GWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEF 140
GWGAV+AKTVSLDAAKVINVTPRYARLR GANGSAKGQIIGWENIELISDRPLETMLKEF
Sbjct: 61 GWGAVIAKTVSLDAAKVINVTPRYARLRVGANGSAKGQIIGWENIELISDRPLETMLKEF 120
Query: 141 KQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVG 200
KQLK YPD+ILIASIMEEY+KAAWEELIDRVE+TGIDA+E+NFSCPHGMPERKMGAAVG
Sbjct: 121 KQLKEEYPDRILIASIMEEYDKAAWEELIDRVEQTGIDALEINFSCPHGMPERKMGAAVG 180
Query: 201 QDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGID 260
QDC LLEEVCGWINAKATVPVWAKMTPNITDIT+PARVAL SG EGVSAINTIMSVMGI+
Sbjct: 181 QDCALLEEVCGWINAKATVPVWAKMTPNITDITQPARVALSSGCEGVSAINTIMSVMGIN 240
Query: 261 LKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGG 320
L TLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMK+EF + DYSLSGIGGVETGG
Sbjct: 241 LNTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKAEFGE-DYSLSGIGGVETGG 299
Query: 321 DAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTH 380
DAAEFILLGANTVQVCTGVMMHGYGLVK+LC ELKDFMKMHNFSSIEDFRGAS+EYFTTH
Sbjct: 300 DAAEFILLGANTVQVCTGVMMHGYGLVKKLCSELKDFMKMHNFSSIEDFRGASLEYFTTH 359
Query: 381 TELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLSMVSN 422
T+LV+ QQEAI+QRKA+R+GLQSDKDWTGDGFVKE+ SMVSN
Sbjct: 360 TDLVQRQQEAIRQRKAIRQGLQSDKDWTGDGFVKESESMVSN 401
>gi|356520655|ref|XP_003528976.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit
PreA-like [Glycine max]
Length = 424
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/424 (82%), Positives = 392/424 (92%), Gaps = 2/424 (0%)
Query: 1 MASLNLNQI-ISNSNTSFAVNRRPGLRL-PSRIGLRVLASDSASAEPDLSITVNGLQMPN 58
MASL++ QI N + F +N +++ PSR+G +V AS++ + EPDLS+TVNGL+MPN
Sbjct: 1 MASLSMIQIRTGNCASGFGLNCAGKVKVGPSRVGFKVFASETQATEPDLSVTVNGLRMPN 60
Query: 59 PFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQ 118
PFVIGSGPPGTNYTVMKRAFDEGWGAV+AKTVSLDAAKVINVTPRYARLRAGANGSAKG+
Sbjct: 61 PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRAGANGSAKGE 120
Query: 119 IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGID 178
IIGWENIELISDRPLETMLKEFKQLK YPD+ILIASIMEEYNKAAWEELIDRVE+TG+D
Sbjct: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180
Query: 179 AIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARV 238
A E+NFSCPHGMPERKMGAAVGQDC LLEEVCGWINAKAT+PVWAKMTPNITDI++PAR+
Sbjct: 181 AFEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARI 240
Query: 239 ALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM 298
AL SG EGVSAINTIMSVMGI+L TLRPEPCVEGYSTPGGYS +AVHPIALGKVMSIAKM
Sbjct: 241 ALSSGCEGVSAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSARAVHPIALGKVMSIAKM 300
Query: 299 MKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFM 358
MKSEF+ ++Y+LS IGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVK+LC EL+DFM
Sbjct: 301 MKSEFDSENYTLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCLELQDFM 360
Query: 359 KMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLS 418
K HNF+SIEDFRG S+EYFTTHT+LVR Q+EA+Q+RKA++KGLQSDKDWTGDGFV+ET S
Sbjct: 361 KKHNFTSIEDFRGVSLEYFTTHTDLVRRQKEAVQKRKAIKKGLQSDKDWTGDGFVQETES 420
Query: 419 MVSN 422
MVSN
Sbjct: 421 MVSN 424
>gi|255586410|ref|XP_002533851.1| dihydroorotate dehydrogenase, putative [Ricinus communis]
gi|223526209|gb|EEF28534.1| dihydroorotate dehydrogenase, putative [Ricinus communis]
Length = 429
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/429 (83%), Positives = 389/429 (90%), Gaps = 7/429 (1%)
Query: 1 MASLNLNQII-SNSNTSFAVNRRPGL----RLPSRIGLRVLASDSASA--EPDLSITVNG 53
MASL+L QI NS A RP RL +R+G+ +ASD++ EPDLS+TVNG
Sbjct: 1 MASLSLTQIRGKNSVAELAALSRPCFLATQRLKNRVGVLRVASDASETKVEPDLSVTVNG 60
Query: 54 LQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANG 113
L+MPNPFVIGSGPPGTNYTVMKRAFDEGWGAV+AKTVSLDA KVINVTPRYARLRAG NG
Sbjct: 61 LKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAEKVINVTPRYARLRAGVNG 120
Query: 114 SAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVE 173
SAKGQIIGWENIELISDRPLETMLKEFKQLK YP++ILIASIMEEY+KAAWEELIDRVE
Sbjct: 121 SAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPERILIASIMEEYDKAAWEELIDRVE 180
Query: 174 ETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDIT 233
+TGIDAIEVNFSCPHGMPERKMGAAVGQDC LLEE+CGW+NAKATVPVWAKMTPNITDIT
Sbjct: 181 QTGIDAIEVNFSCPHGMPERKMGAAVGQDCGLLEEICGWVNAKATVPVWAKMTPNITDIT 240
Query: 234 EPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVM 293
EPAR ALRSG EG+SAINTIMSVMGI+LKTLRPEPCVEGYSTPGGYS KAVHPIALGKVM
Sbjct: 241 EPARAALRSGCEGISAINTIMSVMGINLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVM 300
Query: 294 SIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEE 353
+IAKMMKSEFN YSLSGIGGVETG DAAEFILLGANTVQVCTGVMMHGYGLVK+L +E
Sbjct: 301 NIAKMMKSEFNIDQYSLSGIGGVETGSDAAEFILLGANTVQVCTGVMMHGYGLVKKLNDE 360
Query: 354 LKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFV 413
LKDFMKMHNFSSIEDFRG S++YFTTHT+LVR Q+EAI+QRKAV++GLQSDKDWTGDGFV
Sbjct: 361 LKDFMKMHNFSSIEDFRGVSLDYFTTHTDLVRRQKEAIEQRKAVKRGLQSDKDWTGDGFV 420
Query: 414 KETLSMVSN 422
KE+ SMVSN
Sbjct: 421 KESESMVSN 429
>gi|6177796|dbj|BAA86060.1| JPR ORF1 [Pyrus pyrifolia]
Length = 424
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/425 (84%), Positives = 384/425 (90%), Gaps = 4/425 (0%)
Query: 1 MASLNLNQII-SNSNTSFAVNRRPGLRL--PSRIGLRVLASDSASAEPDLSITVNGLQMP 57
MAS++ QI N F+ RP +RL PSR+G RV AS+S AEPDLS+TVNGL MP
Sbjct: 1 MASISFTQIGGKNPVAEFSRRPRPEVRLTRPSRVGFRVFASES-KAEPDLSVTVNGLHMP 59
Query: 58 NPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKG 117
NPFVIGSGPPGTNYTVMKRAFDEGWGAV+AKTVSL+A KV NVTPRYARLR NGSAKG
Sbjct: 60 NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLEADKVKNVTPRYARLRVDGNGSAKG 119
Query: 118 QIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGI 177
QIIGWENIELISDRPL+ MLKEFKQLK YPD+ILIASIMEEYNKA WEELIDRVE+TG+
Sbjct: 120 QIIGWENIELISDRPLDIMLKEFKQLKQEYPDRILIASIMEEYNKAGWEELIDRVEQTGV 179
Query: 178 DAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPAR 237
DA+E+NFSCPHGMPERKMGAAVGQDC LLEEVCGWINAKATVPVWAKMTPNITDIT+PAR
Sbjct: 180 DALEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVWAKMTPNITDITQPAR 239
Query: 238 VALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAK 297
VAL SG EGVSAINTIMSVMGI+L TLRPEPCVEGYSTPGGYS KAVHPIAL KVM+IAK
Sbjct: 240 VALSSGCEGVSAINTIMSVMGINLTTLRPEPCVEGYSTPGGYSAKAVHPIALAKVMNIAK 299
Query: 298 MMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDF 357
+MKSEF D DYSLSGIGGVE+GGDAAEFILLGANTVQVCTGVMMHGYG+VK+LC EL+DF
Sbjct: 300 LMKSEFGDTDYSLSGIGGVESGGDAAEFILLGANTVQVCTGVMMHGYGVVKKLCSELQDF 359
Query: 358 MKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETL 417
MK HNFSSIEDFRGAS+EYFTTHT+LVR QQEAI+QRKA+RKGLQSDKDWTGDGFVKET
Sbjct: 360 MKQHNFSSIEDFRGASLEYFTTHTDLVRRQQEAIKQRKAIRKGLQSDKDWTGDGFVKETE 419
Query: 418 SMVSN 422
SMVSN
Sbjct: 420 SMVSN 424
>gi|358249226|ref|NP_001239758.1| uncharacterized protein LOC100804632 [Glycine max]
gi|255646113|gb|ACU23543.1| unknown [Glycine max]
Length = 424
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/424 (82%), Positives = 389/424 (91%), Gaps = 2/424 (0%)
Query: 1 MASLNLNQI-ISNSNTSFAVNRRPGLRL-PSRIGLRVLASDSASAEPDLSITVNGLQMPN 58
MASL++ QI N + F +N +++ PSR+G +V AS++ + EPDLS+TVNGL MPN
Sbjct: 1 MASLSMTQIRTGNCASGFGLNCAGKVKVGPSRVGFKVFASETQATEPDLSVTVNGLHMPN 60
Query: 59 PFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQ 118
PFVIGSGPPGTNYTVMKRAFDEGWGAV+AKTVSLDAAKVINVTPRYARLRAGA+ SAKG+
Sbjct: 61 PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRAGADRSAKGE 120
Query: 119 IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGID 178
IIGWENIELISDRPLE MLKEFKQLK YPD+ILIASIMEEYNKAAWEELIDRVE+TG+D
Sbjct: 121 IIGWENIELISDRPLEIMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180
Query: 179 AIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARV 238
A E+NFSCPHGMPERKMGAAVGQDC LLEEVCGWINAKAT+PVWAKMTPNITDI++PARV
Sbjct: 181 AFEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARV 240
Query: 239 ALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM 298
AL SG EGVSAINTIMSVMGI+L TLRPEPCVEGYSTPGGYS KAVHPIALGKVMSIAKM
Sbjct: 241 ALSSGCEGVSAINTIMSVMGINLDTLRPEPCVEGYSTPGGYSAKAVHPIALGKVMSIAKM 300
Query: 299 MKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFM 358
MKSEF+ ++Y+LS IGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVK+LC EL+DFM
Sbjct: 301 MKSEFDSENYTLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCLELQDFM 360
Query: 359 KMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLS 418
K HNF+SIEDFRG S+EYFTTHT+LVR Q+EA+Q+RKA++KGLQSDKDWTGDGFV+ET S
Sbjct: 361 KKHNFTSIEDFRGVSLEYFTTHTDLVRRQKEAVQKRKAIKKGLQSDKDWTGDGFVQETES 420
Query: 419 MVSN 422
MVSN
Sbjct: 421 MVSN 424
>gi|357499179|ref|XP_003619878.1| Dihydropyrimidine dehydrogenase [Medicago truncatula]
gi|355494893|gb|AES76096.1| Dihydropyrimidine dehydrogenase [Medicago truncatula]
Length = 424
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/424 (82%), Positives = 386/424 (91%), Gaps = 2/424 (0%)
Query: 1 MASLNLNQIIS-NSNTSFAVN-RRPGLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPN 58
MA+L++ Q+ + NS + F+ N + PSR+ +V AS+ +EPDLS+ VNGL MPN
Sbjct: 1 MANLSMTQLKTRNSASRFSFNFSKKVYPRPSRVDFKVFASEGQVSEPDLSVKVNGLHMPN 60
Query: 59 PFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQ 118
PFVIGSGPPGTNYTVMKRAFDEGWG V+AKTVSLDAAKVINVTPRYARLRA ANGSAKG+
Sbjct: 61 PFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAAKVINVTPRYARLRANANGSAKGE 120
Query: 119 IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGID 178
IIGW+NIELISDRPLETMLKEFKQLK YPD+ILIASIMEEYNKAAWEELIDRVE+TGID
Sbjct: 121 IIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGID 180
Query: 179 AIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARV 238
AIE+NFSCPHGMPERKMGAAVGQDC LLEEVCGWINAKATVPVWAKMTPNITDI++PARV
Sbjct: 181 AIEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVWAKMTPNITDISQPARV 240
Query: 239 ALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM 298
AL SG EGV+AINTIMSVMGI+L TLRPEPCVEGYSTPGGYS KAVHPIALGKVMSIAKM
Sbjct: 241 ALSSGCEGVAAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSAKAVHPIALGKVMSIAKM 300
Query: 299 MKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFM 358
MKSEF+ ++YSLS IGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVK+L ELKDFM
Sbjct: 301 MKSEFDSENYSLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLSLELKDFM 360
Query: 359 KMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLS 418
K HNF+SIEDFRGAS++YFTTHT+LV QQEAI+QRKA++KGLQSDKDWTGDGFVKE+ S
Sbjct: 361 KKHNFTSIEDFRGASLQYFTTHTDLVHRQQEAIKQRKAIKKGLQSDKDWTGDGFVKESES 420
Query: 419 MVSN 422
MVSN
Sbjct: 421 MVSN 424
>gi|217072368|gb|ACJ84544.1| unknown [Medicago truncatula]
Length = 424
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/424 (82%), Positives = 386/424 (91%), Gaps = 2/424 (0%)
Query: 1 MASLNLNQIIS-NSNTSFAVN-RRPGLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPN 58
MA+L++ Q+ + NS + F+ N + PSR+ +V AS+ +EPDLS+ VNGL MPN
Sbjct: 1 MANLSMTQLKTRNSASRFSFNFSKKVYPRPSRVDFKVFASEGQVSEPDLSVKVNGLHMPN 60
Query: 59 PFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQ 118
PFVIGSGPPGTNYTVMKRAFDEGWG V+AKTVSLDAAKVINVTPRYARLRA ANGSAKG+
Sbjct: 61 PFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAAKVINVTPRYARLRANANGSAKGE 120
Query: 119 IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGID 178
IIGW+NIELISDRPLETMLKEFKQLK YPD+ILIASIMEEYNKAAWEELIDRVE+TGID
Sbjct: 121 IIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGID 180
Query: 179 AIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARV 238
AIE+NFSCPHGMPERKMGAAVGQDC LLEEVCGWINAKATVPVWAKMTPNITDI++PARV
Sbjct: 181 AIEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVWAKMTPNITDISQPARV 240
Query: 239 ALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM 298
AL SG EG++AINTIMSVMGI+L TLRPEPCVEGYSTPGGYS KAVHPIALGKVMSIAKM
Sbjct: 241 ALSSGCEGIAAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSAKAVHPIALGKVMSIAKM 300
Query: 299 MKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFM 358
MKSEF+ ++YSLS IGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVK+L ELKDFM
Sbjct: 301 MKSEFDSENYSLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLSLELKDFM 360
Query: 359 KMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLS 418
K HNF+SIEDFRGAS++YFTTHT+LV +QEAI+QRKA++KGLQSDKDWTGDGFVKE+ S
Sbjct: 361 KKHNFTSIEDFRGASLQYFTTHTDLVHRRQEAIKQRKAIKKGLQSDKDWTGDGFVKESES 420
Query: 419 MVSN 422
MVSN
Sbjct: 421 MVSN 424
>gi|350536037|ref|NP_001234738.1| PYD1A protein [Solanum lycopersicum]
gi|24850453|gb|AAN64920.1| putative dehydrogenase [Solanum lycopersicum]
Length = 429
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/430 (82%), Positives = 377/430 (87%), Gaps = 9/430 (2%)
Query: 1 MASLNLNQII-----SNSNTSFAVNRRPGLRLP---SRIGLRVLASDSASAEPDLSITVN 52
MASL L Q I NS V R G RL R+G R++A + S EPDLS+TVN
Sbjct: 1 MASLGLAQRIRIGLDGNSGVENPVMGRAG-RLNFGRKRVGFRIMALEGQSVEPDLSVTVN 59
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGAN 112
GL+MPNPFVIGSGPPGTNYTVMKRAFDEGWG V+AKTVSL+A KV NVTPRYA+LRA AN
Sbjct: 60 GLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLEADKVKNVTPRYAKLRADAN 119
Query: 113 GSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRV 172
GSAKGQIIGW+NIELISDRPLETMLKEFKQLK YPD+ILIASIMEEYNKAAWEELI R
Sbjct: 120 GSAKGQIIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIYRC 179
Query: 173 EETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDI 232
EETGIDA E+NFSCPHGMPER+MGAAVGQDC LLEEVCGWINA ATVPVWAKMTPNITDI
Sbjct: 180 EETGIDAFEINFSCPHGMPERRMGAAVGQDCDLLEEVCGWINAVATVPVWAKMTPNITDI 239
Query: 233 TEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKV 292
T+PARVAL G EGVSAINTIMSVMGI+L TLRPEPCVEGYSTPGGYS KAVHPIAL KV
Sbjct: 240 TKPARVALNQGCEGVSAINTIMSVMGINLDTLRPEPCVEGYSTPGGYSSKAVHPIALAKV 299
Query: 293 MSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352
M+IA+MMKSEF DKDYSLS IGGVETGGDAAEFILLGA+TVQVCTGVMMHGYGLVK LC
Sbjct: 300 MNIARMMKSEFGDKDYSLSAIGGVETGGDAAEFILLGADTVQVCTGVMMHGYGLVKTLCS 359
Query: 353 ELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGF 412
ELKDFM+ HNFSSIEDFRG S+EYFTTHT+LVR QQEAI+QRKAV+KGLQSDKDWTGDGF
Sbjct: 360 ELKDFMRKHNFSSIEDFRGTSLEYFTTHTDLVRRQQEAIRQRKAVKKGLQSDKDWTGDGF 419
Query: 413 VKETLSMVSN 422
V+ET SMVSN
Sbjct: 420 VQETESMVSN 429
>gi|297734363|emb|CBI15610.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/367 (91%), Positives = 355/367 (96%), Gaps = 1/367 (0%)
Query: 56 MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSA 115
MPNPFVIGSGPPGTNYTVMKRAFDEGWGAV+AKTVSLDAAKVINVTPRYARLR GANGSA
Sbjct: 1 MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRVGANGSA 60
Query: 116 KGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEET 175
KGQIIGWENIELISDRPLETMLKEFKQLK YPD+ILIASIMEEY+KAAWEELIDRVE+T
Sbjct: 61 KGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYDKAAWEELIDRVEQT 120
Query: 176 GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEP 235
GIDA+E+NFSCPHGMPERKMGAAVGQDC LLEEVCGWINAKATVPVWAKMTPNITDIT+P
Sbjct: 121 GIDALEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVWAKMTPNITDITQP 180
Query: 236 ARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSI 295
ARVAL SG EGVSAINTIMSVMGI+L TLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSI
Sbjct: 181 ARVALSSGCEGVSAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSI 240
Query: 296 AKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELK 355
AKMMK+EF + DYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVK+LC ELK
Sbjct: 241 AKMMKAEFGE-DYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCSELK 299
Query: 356 DFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKE 415
DFMKMHNFSSIEDFRGAS+EYFTTHT+LV+ QQEAI+QRKA+R+GLQSDKDWTGDGFVKE
Sbjct: 300 DFMKMHNFSSIEDFRGASLEYFTTHTDLVQRQQEAIRQRKAIRQGLQSDKDWTGDGFVKE 359
Query: 416 TLSMVSN 422
+ SMVSN
Sbjct: 360 SESMVSN 366
>gi|15229529|ref|NP_188408.1| pyrimidine 1 [Arabidopsis thaliana]
gi|9294485|dbj|BAB02704.1| senescencs-related protein; dihydroorotate dehydrogenase-like
protein [Arabidopsis thaliana]
gi|14334712|gb|AAK59534.1| putative dehydrogenase [Arabidopsis thaliana]
gi|16323430|gb|AAL15209.1| putative dehydrogenase [Arabidopsis thaliana]
gi|24850451|gb|AAN64919.1| putative dehydrogenase [Arabidopsis thaliana]
gi|332642489|gb|AEE76010.1| pyrimidine 1 [Arabidopsis thaliana]
Length = 426
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/425 (78%), Positives = 381/425 (89%), Gaps = 8/425 (1%)
Query: 3 SLNLNQIIS-NSNTSFAVNRRPGLRL----PSRIGLRVLASDSASAEPDLSITVNGLQMP 57
S LN+ +S T+ + + P R P+R+GL++ S +A +EPDLS+TVNGL+MP
Sbjct: 5 SFALNRFSGLSSKTTLSADFDPSSRRSFLPPTRVGLKI--SSAAESEPDLSVTVNGLKMP 62
Query: 58 NPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKG 117
NPFVIGSGPPGTNYTVMKRAFDEGWGAV+AKTVSLDA+KVINVTPRYARLR G+NGSAK
Sbjct: 63 NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDASKVINVTPRYARLRTGSNGSAKT 122
Query: 118 QIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGI 177
+IGW+NIELISDRPLETMLKEF++LK YPD+ILIAS+MEEYNK AWEELIDRVE+TG+
Sbjct: 123 DVIGWQNIELISDRPLETMLKEFERLKKEYPDRILIASVMEEYNKTAWEELIDRVEQTGV 182
Query: 178 DAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPAR 237
DA+E+NFSCPHGMPER+MGAAVGQDC LL+EVCGWINAKATVPVWAKMTPNITDITEPAR
Sbjct: 183 DALEINFSCPHGMPERRMGAAVGQDCALLDEVCGWINAKATVPVWAKMTPNITDITEPAR 242
Query: 238 VALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAK 297
V+L+SG EG++AINTIMSVMGID+KTLRPEPCVEGYSTPGGYS KAV PIAL KVM+IAK
Sbjct: 243 VSLKSGCEGIAAINTIMSVMGIDMKTLRPEPCVEGYSTPGGYSYKAVRPIALAKVMNIAK 302
Query: 298 MMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDF 357
MMKSEF++ D SLSGIGGVETG DAAEFILLG+NTVQVCTGVMMHGYG VK LC ELKDF
Sbjct: 303 MMKSEFSE-DRSLSGIGGVETGYDAAEFILLGSNTVQVCTGVMMHGYGHVKTLCAELKDF 361
Query: 358 MKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETL 417
MK HNFS+IE+FRG S++YFTTHT+LV+ Q+EA++QRKA ++GL+SDKDWTGDGFVKET
Sbjct: 362 MKQHNFSTIEEFRGHSLQYFTTHTDLVKRQKEAVEQRKAEKRGLKSDKDWTGDGFVKETE 421
Query: 418 SMVSN 422
SMVSN
Sbjct: 422 SMVSN 426
>gi|297830412|ref|XP_002883088.1| dihydroorotate dehydrogenase family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328928|gb|EFH59347.1| dihydroorotate dehydrogenase family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 426
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/425 (77%), Positives = 381/425 (89%), Gaps = 8/425 (1%)
Query: 3 SLNLNQIIS-NSNTSFAVNRRPGLRL----PSRIGLRVLASDSASAEPDLSITVNGLQMP 57
S LN+ +S T+ + + P R P+R+GL++ S + +EPDLS+TVNGL+MP
Sbjct: 5 SFALNRFSGLSSKTTLSADFDPSTRRSFLPPTRVGLKI--SSATESEPDLSVTVNGLKMP 62
Query: 58 NPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKG 117
NPFVIGSGPPGTNYTVMKRAFDEGWGAV+AKTVSLDAAKVINVTPRYARLR G+NGSAK
Sbjct: 63 NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRTGSNGSAKT 122
Query: 118 QIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGI 177
+IGW+NIELISDRPLETMLKEF++LK YPD+ILIASIMEEYNK AWEELIDRVE+TG+
Sbjct: 123 DVIGWQNIELISDRPLETMLKEFERLKKEYPDRILIASIMEEYNKTAWEELIDRVEQTGV 182
Query: 178 DAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPAR 237
DA+E+NFSCPHGMPER+MGAAVGQDC LL+EVCGWINAKATVPVWAKMTPNITDITEPAR
Sbjct: 183 DALEINFSCPHGMPERRMGAAVGQDCVLLDEVCGWINAKATVPVWAKMTPNITDITEPAR 242
Query: 238 VALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAK 297
V+L+SG EG+SAINTIMSVMG+D+KTLRPEPCVEGYSTPGGYS KAV PIAL KVM+IAK
Sbjct: 243 VSLKSGCEGISAINTIMSVMGVDMKTLRPEPCVEGYSTPGGYSYKAVRPIALAKVMNIAK 302
Query: 298 MMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDF 357
MMKSEF++ ++SLSGIGGVETG DAAEFILLG+NTVQVCTGVMMHGYG VK LC EL+DF
Sbjct: 303 MMKSEFSE-NHSLSGIGGVETGYDAAEFILLGSNTVQVCTGVMMHGYGHVKTLCAELQDF 361
Query: 358 MKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETL 417
MK HNFS+IE+FRG S++YFTTHT+LV+ Q+EA++QRKA ++GL+SDKDWTGDGFVKET
Sbjct: 362 MKQHNFSTIEEFRGHSLQYFTTHTDLVKRQKEAVEQRKAEKRGLKSDKDWTGDGFVKETE 421
Query: 418 SMVSN 422
SMVSN
Sbjct: 422 SMVSN 426
>gi|388513197|gb|AFK44660.1| unknown [Medicago truncatula]
Length = 367
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/367 (88%), Positives = 350/367 (95%)
Query: 56 MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSA 115
MPNPFVIGSGPPGTNYTVMKRAFDEGWG V+AKTVSLDAAKVINVTPRYARLRA ANGSA
Sbjct: 1 MPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAAKVINVTPRYARLRANANGSA 60
Query: 116 KGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEET 175
KG+IIGW+NIELISDRPLETMLKEFKQLK YPD+ILIASIMEEYNKAAWEELIDRVE+T
Sbjct: 61 KGEIIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQT 120
Query: 176 GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEP 235
GIDAIE+NFSCPHGMPERKMGAAVGQDC LLEEVCGWINAKATVPVWAKMTPNITDI++P
Sbjct: 121 GIDAIEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVWAKMTPNITDISQP 180
Query: 236 ARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSI 295
ARVAL SG EG++AINTIMSVMGI+L TLRPEPCVEGYSTPGGYS KAVHPIALGKVMSI
Sbjct: 181 ARVALSSGCEGIAAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSAKAVHPIALGKVMSI 240
Query: 296 AKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELK 355
AKMMKSEF+ ++YSLS IGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVK+L ELK
Sbjct: 241 AKMMKSEFDSENYSLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLSLELK 300
Query: 356 DFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKE 415
DFMK HNF+SIEDFRGAS++YFTTHT+LV +QEAI+QRKA++KGLQSDKDWTGDGFVKE
Sbjct: 301 DFMKKHNFTSIEDFRGASLQYFTTHTDLVHRRQEAIKQRKAIKKGLQSDKDWTGDGFVKE 360
Query: 416 TLSMVSN 422
+ SMVSN
Sbjct: 361 SESMVSN 367
>gi|357138201|ref|XP_003570686.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit
PreA-like [Brachypodium distachyon]
Length = 419
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/422 (79%), Positives = 369/422 (87%), Gaps = 3/422 (0%)
Query: 1 MASLNLNQIISNSNTSFAVNRRPGLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPF 60
M SL L S + + + R PG R + + RV AS S+EPDLS+ VNGL+MPNPF
Sbjct: 1 MESLTLRASPSTTTAASPLLRLPGRRQAASV--RVSASSGGSSEPDLSVRVNGLKMPNPF 58
Query: 61 VIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQII 120
VIGSGPPGTNYTVMKRAFDEGWG V+AKTVSLDA KVINVTPRYARLRA NG+AK +II
Sbjct: 59 VIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAGKVINVTPRYARLRAEPNGAAKSRII 118
Query: 121 GWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAI 180
GW+NIELISDRPLETMLKEFKQLK YPD+ILI SIMEEYNKAAW ELI+RVEE+G+DA+
Sbjct: 119 GWQNIELISDRPLETMLKEFKQLKKEYPDRILIGSIMEEYNKAAWHELIERVEESGVDAL 178
Query: 181 EVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVAL 240
E+NFSCPHGMPERKMGAAVGQDC LLEEV GWIN KATVPVWAKMTPNITDITEPARVAL
Sbjct: 179 EINFSCPHGMPERKMGAAVGQDCGLLEEVSGWINEKATVPVWAKMTPNITDITEPARVAL 238
Query: 241 RSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMK 300
+SG EGV+AINTIMSVMGI+LKTLRPEPCVEGYSTPGGYS +AVHPIAL KVM IA++MK
Sbjct: 239 KSGCEGVAAINTIMSVMGINLKTLRPEPCVEGYSTPGGYSARAVHPIALAKVMQIARLMK 298
Query: 301 SEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKM 360
EF D SLS IGGVETG DAAEFILLGA+TVQVCTGVMMHGYGLVK+LC EL+DFM+
Sbjct: 299 EEFPDGQ-SLSAIGGVETGNDAAEFILLGADTVQVCTGVMMHGYGLVKKLCTELQDFMRE 357
Query: 361 HNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLSMV 420
H+FSSI+DFRGAS+ YFTTHT+LV+ QQEAI+QRKA+R GLQSDKDWTGDGFVKET SMV
Sbjct: 358 HDFSSIDDFRGASLPYFTTHTDLVQRQQEAIKQRKAIRLGLQSDKDWTGDGFVKETESMV 417
Query: 421 SN 422
SN
Sbjct: 418 SN 419
>gi|242062600|ref|XP_002452589.1| hypothetical protein SORBIDRAFT_04g028610 [Sorghum bicolor]
gi|241932420|gb|EES05565.1| hypothetical protein SORBIDRAFT_04g028610 [Sorghum bicolor]
Length = 420
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/400 (82%), Positives = 359/400 (89%), Gaps = 4/400 (1%)
Query: 26 RLPSR---IGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGW 82
RLP R +R AS SA+ EPDLS+ VNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGW
Sbjct: 22 RLPGRQRATYVRATASASAAGEPDLSVRVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGW 81
Query: 83 GAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQ 142
G V+AKTVSLDA KVINVTPRYA+LRA NG+A G+IIGW+NIELISDRPLETML EFKQ
Sbjct: 82 GGVIAKTVSLDAEKVINVTPRYAKLRADPNGAAMGRIIGWQNIELISDRPLETMLNEFKQ 141
Query: 143 LKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQD 202
LK YPD+ILI SIMEEYNKAAW ELI+RVEE+G+DA+E+NFSCPHGMPERKMGAAVGQD
Sbjct: 142 LKKEYPDRILIGSIMEEYNKAAWHELIERVEESGVDALEINFSCPHGMPERKMGAAVGQD 201
Query: 203 CRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK 262
C LLEEVCGWIN KATVPVWAKMTPNITDIT+PAR++L+SG EGVSAINTIMSVMGI+LK
Sbjct: 202 CDLLEEVCGWINEKATVPVWAKMTPNITDITQPARISLKSGCEGVSAINTIMSVMGINLK 261
Query: 263 TLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDA 322
TLRPEPCVEGYSTPGGYS +AVHPIAL KVM IA+MMK EF D SLS IGGVETG DA
Sbjct: 262 TLRPEPCVEGYSTPGGYSARAVHPIALAKVMQIARMMKEEFADGQ-SLSAIGGVETGNDA 320
Query: 323 AEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTE 382
AEFILLGA+TVQVCTGVMMHGY LVK+LC EL+DFM+ HNFSSIE+FRGAS+ YFTTHT+
Sbjct: 321 AEFILLGADTVQVCTGVMMHGYPLVKKLCAELQDFMREHNFSSIEEFRGASLPYFTTHTD 380
Query: 383 LVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLSMVSN 422
LV QQEAI+QRKA++KGLQSDKDWTGDGFVKET SMVSN
Sbjct: 381 LVHRQQEAIKQRKAIKKGLQSDKDWTGDGFVKETESMVSN 420
>gi|115448547|ref|NP_001048053.1| Os02g0736400 [Oryza sativa Japonica Group]
gi|46390439|dbj|BAD15901.1| putative dihydropyrimidine dehydrogenase [Oryza sativa Japonica
Group]
gi|70906540|gb|AAZ14951.1| putative dihydroorotate dehydrogenase [Oryza sativa Japonica Group]
gi|113537584|dbj|BAF09967.1| Os02g0736400 [Oryza sativa Japonica Group]
gi|218191531|gb|EEC73958.1| hypothetical protein OsI_08851 [Oryza sativa Indica Group]
gi|222623634|gb|EEE57766.1| hypothetical protein OsJ_08303 [Oryza sativa Japonica Group]
Length = 414
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/422 (78%), Positives = 366/422 (86%), Gaps = 8/422 (1%)
Query: 1 MASLNLNQIISNSNTSFAVNRRPGLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPF 60
M SL L ++ +T+ + R PG R + V AS + + EPDLS+ VNGL+MPNPF
Sbjct: 1 MESLTLR---ASPSTAAPLRRVPGRR---HAAVSVRAS-AGAGEPDLSVRVNGLKMPNPF 53
Query: 61 VIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQII 120
VIGSGPPGTNYTVMKRAFDEGWG V+AKTVSLDA KVINVTPRYARLRA NGS K II
Sbjct: 54 VIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAEKVINVTPRYARLRADPNGSTKSPII 113
Query: 121 GWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAI 180
GW+NIELISDRPLETML EFKQLK YPD+ILI SIMEEYNKAAW ELI+RVEE+G+DA+
Sbjct: 114 GWQNIELISDRPLETMLNEFKQLKKEYPDRILIGSIMEEYNKAAWHELIERVEESGVDAL 173
Query: 181 EVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVAL 240
E+NFSCPHGMPERKMGAAVGQDC LLEEVCGWIN KATVPVWAKMTPNITDIT+PAR++L
Sbjct: 174 EINFSCPHGMPERKMGAAVGQDCDLLEEVCGWINEKATVPVWAKMTPNITDITKPARISL 233
Query: 241 RSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMK 300
+SG EGVSAINTIMSVMGI+LKTLRPEPCVEGYSTPGGYS +AVHPIAL KVM IA+MMK
Sbjct: 234 KSGCEGVSAINTIMSVMGINLKTLRPEPCVEGYSTPGGYSARAVHPIALAKVMQIARMMK 293
Query: 301 SEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKM 360
EF D SLS IGGVETG DAAEFILLGA+TVQVCTGVMMHGYGLVK+LC EL+DFM+
Sbjct: 294 EEFADGQ-SLSAIGGVETGNDAAEFILLGADTVQVCTGVMMHGYGLVKKLCAELQDFMRQ 352
Query: 361 HNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLSMV 420
HNFSSIEDFRGAS+ YFTTHT+LV Q+EAI QRKA+RKGL+SDKDWTGDGFVKET SMV
Sbjct: 353 HNFSSIEDFRGASLPYFTTHTDLVHRQREAINQRKAIRKGLESDKDWTGDGFVKETESMV 412
Query: 421 SN 422
SN
Sbjct: 413 SN 414
>gi|226505722|ref|NP_001142101.1| uncharacterized protein LOC100274265 [Zea mays]
gi|194707116|gb|ACF87642.1| unknown [Zea mays]
gi|223947605|gb|ACN27886.1| unknown [Zea mays]
gi|413938758|gb|AFW73309.1| hypothetical protein ZEAMMB73_476987 [Zea mays]
Length = 415
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/396 (80%), Positives = 357/396 (90%), Gaps = 1/396 (0%)
Query: 27 LPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVV 86
LP R + + +++ EPDLS+ VNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAV+
Sbjct: 21 LPGRQRATYVRATASAGEPDLSVRVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVI 80
Query: 87 AKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKAL 146
AKTVSLDA KVINVTPRYA+LRA NG+A G+IIGW+NIELISDRPLETML EFKQLK
Sbjct: 81 AKTVSLDAEKVINVTPRYAKLRAEPNGAAMGRIIGWQNIELISDRPLETMLNEFKQLKKE 140
Query: 147 YPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLL 206
YPD+ILI SIMEEYNKAAW ELI+RVEE+G+DA+E+NFSCPHGMPERKMGAAVGQDC LL
Sbjct: 141 YPDRILIGSIMEEYNKAAWHELIERVEESGVDALEINFSCPHGMPERKMGAAVGQDCDLL 200
Query: 207 EEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRP 266
EEVCGWIN KATVPVWAKMTPNITDIT+PAR++L+SG EGVSAINTIMSVMGI+LKTLRP
Sbjct: 201 EEVCGWINEKATVPVWAKMTPNITDITQPARISLKSGCEGVSAINTIMSVMGINLKTLRP 260
Query: 267 EPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFI 326
EPCVEGYSTPGGYS +AVHPIAL KVM IA+MMK EF D SLS IGGVETG DAAEFI
Sbjct: 261 EPCVEGYSTPGGYSARAVHPIALAKVMQIARMMKEEFADGQ-SLSAIGGVETGNDAAEFI 319
Query: 327 LLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRM 386
LLGA+TVQVCTGVM+HGY LVK+LC EL+DFM+ HNFSSIE+FRGAS+ YFTTHT+LV
Sbjct: 320 LLGADTVQVCTGVMIHGYPLVKKLCAELQDFMREHNFSSIEEFRGASLPYFTTHTDLVHR 379
Query: 387 QQEAIQQRKAVRKGLQSDKDWTGDGFVKETLSMVSN 422
QQEA++QRKA++KGLQSDK+WTGDGFVKET SMVSN
Sbjct: 380 QQEAVRQRKAIKKGLQSDKEWTGDGFVKETESMVSN 415
>gi|326526047|dbj|BAJ93200.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/381 (82%), Positives = 350/381 (91%), Gaps = 1/381 (0%)
Query: 42 SAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT 101
+ EPDLS+TVNGL+MPNPFVIGSGPPGTNYTVMKRAFDEGWG V+AKTVSLDA KVINVT
Sbjct: 38 AGEPDLSVTVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAGKVINVT 97
Query: 102 PRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYN 161
PRYARLRA NGS K IIGW+NIELISDRPLETML EFKQLK YPD+ILI SIMEEYN
Sbjct: 98 PRYARLRADPNGSTKSPIIGWQNIELISDRPLETMLNEFKQLKKEYPDRILIGSIMEEYN 157
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
KAAW ELI+RVEE+G+DA+E+NFSCPHGMPERKMGAAVGQDC LLEEV GWIN KATVPV
Sbjct: 158 KAAWHELIERVEESGVDALEINFSCPHGMPERKMGAAVGQDCALLEEVSGWINEKATVPV 217
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
W+KMTPNITDIT+P+R+AL+SGSEG++AINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS
Sbjct: 218 WSKMTPNITDITQPSRIALKSGSEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSA 277
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
+AVHPIAL KVM IA+++K EF + SLS IGGVETG DAAEFILLGA+TVQVCTGVMM
Sbjct: 278 RAVHPIALAKVMQIARLIKEEFPE-GRSLSAIGGVETGNDAAEFILLGADTVQVCTGVMM 336
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGL 401
HGYGLVK+LC EL+DFM+MH+FSSIEDFRGAS+ YFTTHT+LV+ Q+EAI+QRKA+R GL
Sbjct: 337 HGYGLVKKLCTELQDFMRMHDFSSIEDFRGASLPYFTTHTDLVQRQKEAIKQRKAIRMGL 396
Query: 402 QSDKDWTGDGFVKETLSMVSN 422
QSDKDWTGDGFVKET SMVSN
Sbjct: 397 QSDKDWTGDGFVKETESMVSN 417
>gi|116784451|gb|ABK23347.1| unknown [Picea sitchensis]
Length = 368
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/368 (86%), Positives = 344/368 (93%), Gaps = 1/368 (0%)
Query: 56 MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGA-NGS 114
MPNPFVIGSGPPGTNYTVMKRAFDEGWGAV+AKTVSLD++KVINVTPRYARLRAG NGS
Sbjct: 1 MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDSSKVINVTPRYARLRAGGHNGS 60
Query: 115 AKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEE 174
AKG++IGWENIELISDRPLETMLKEFKQLK YPD+ILIAS+MEEY++AAW+ELI+RVEE
Sbjct: 61 AKGEVIGWENIELISDRPLETMLKEFKQLKKEYPDRILIASVMEEYDRAAWQELIERVEE 120
Query: 175 TGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITE 234
TG+DA+E+NFSCPHGMPERKMGAAVGQDC LLEEVCGW+N KATVPVWAKMTPN+TDI E
Sbjct: 121 TGVDALEINFSCPHGMPERKMGAAVGQDCALLEEVCGWVNEKATVPVWAKMTPNVTDIAE 180
Query: 235 PARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMS 294
PARVALRSGSEG++AINTIMSVMGI+L TLRPEPCVEGYSTPGGYS KAVHPIAL KVMS
Sbjct: 181 PARVALRSGSEGIAAINTIMSVMGINLDTLRPEPCVEGYSTPGGYSSKAVHPIALAKVMS 240
Query: 295 IAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEEL 354
IA+MMKSEF D SLSGIGGVE GG AAEFILLGANTVQVCTGVMMHGYG VK+LC EL
Sbjct: 241 IAQMMKSEFPDPALSLSGIGGVENGGHAAEFILLGANTVQVCTGVMMHGYGHVKQLCSEL 300
Query: 355 KDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVK 414
KDFM HNFSSIEDFRG S++YFTTHT+LVR QQEAIQQRKA+RKGL SDK+WTGDGFVK
Sbjct: 301 KDFMVKHNFSSIEDFRGISLQYFTTHTDLVRRQQEAIQQRKAIRKGLASDKEWTGDGFVK 360
Query: 415 ETLSMVSN 422
ET +MVSN
Sbjct: 361 ETETMVSN 368
>gi|168015012|ref|XP_001760045.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688795|gb|EDQ75170.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 386
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 297/383 (77%), Positives = 337/383 (87%)
Query: 40 SASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVIN 99
+A+ PDLS+TVNGL++PNPFVIGSGPPGTNYTVMKRAFDEGWG V+AKTVSLD++KV+N
Sbjct: 4 AAAEGPDLSVTVNGLKLPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDSSKVVN 63
Query: 100 VTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEE 159
VTPRYARL+A A K ++IGWENIELISDRP ETML E KQLK YPD+ILIASIMEE
Sbjct: 64 VTPRYARLKASALSGKKPEVIGWENIELISDRPFETMLAEMKQLKEEYPDRILIASIMEE 123
Query: 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219
YN+ AWEE+I+RVEETG+DA EVNFSCPHGMPERKMG A+GQDC +L+EVCGWINAKAT+
Sbjct: 124 YNRDAWEEIIERVEETGVDAFEVNFSCPHGMPERKMGMAMGQDCSVLDEVCGWINAKATI 183
Query: 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279
PVWAKMTPNITDIT+PARVAL +G EGV+AINTI SVMGI+L TLRPEPCVEGYSTPGGY
Sbjct: 184 PVWAKMTPNITDITQPARVALNAGCEGVAAINTITSVMGINLDTLRPEPCVEGYSTPGGY 243
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S KAV PIAL KVMSIA+MMK+EF ++ SLSGIGG+ETG AAEFILLGA+TVQVCTGV
Sbjct: 244 SSKAVRPIALAKVMSIAQMMKAEFPGQNKSLSGIGGIETGDHAAEFILLGADTVQVCTGV 303
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRK 399
M+HGYG VK LC +L+ FM H F+SIEDFRGAS+ YFTTH +LVR Q EAIQ +K RK
Sbjct: 304 MLHGYGHVKHLCTDLQAFMDKHGFTSIEDFRGASLGYFTTHADLVRRQNEAIQHKKKERK 363
Query: 400 GLQSDKDWTGDGFVKETLSMVSN 422
GL SDKDWTG+GFVKET +MVSN
Sbjct: 364 GLASDKDWTGEGFVKETETMVSN 386
>gi|168058192|ref|XP_001781094.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667491|gb|EDQ54120.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 386
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 291/383 (75%), Positives = 334/383 (87%)
Query: 40 SASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVIN 99
+A+ PDLS+TVNGL+ NPFVIGSGPPGTNYTVMKRAF+EGWG V+AKTVSLD++KV+N
Sbjct: 4 AAAEGPDLSVTVNGLKFANPFVIGSGPPGTNYTVMKRAFEEGWGGVIAKTVSLDSSKVVN 63
Query: 100 VTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEE 159
VTPRYARL+A K ++IGW+NIELISDRP ETML E KQLK +PD+ILIASIMEE
Sbjct: 64 VTPRYARLKASGAPGTKPEVIGWQNIELISDRPFETMLAEMKQLKEEFPDRILIASIMEE 123
Query: 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219
YN+ AWEE+I+RVEE G+DA E+NFSCPHGMPERKMG A+GQDC +LEEVCGWINAKAT+
Sbjct: 124 YNRDAWEEIIERVEEAGVDAFEINFSCPHGMPERKMGMAMGQDCSVLEEVCGWINAKATI 183
Query: 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279
PVWAKMTPNITDIT+PAR ALRSG EGV+AINTIMSVMGI+L TLRPEPCVEGYSTPGGY
Sbjct: 184 PVWAKMTPNITDITQPARTALRSGCEGVAAINTIMSVMGINLDTLRPEPCVEGYSTPGGY 243
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
SCKAV PIAL KVMSIA+MMK+EF +D SLSGIGGVE+G AAEFILLGA+TVQVCTGV
Sbjct: 244 SCKAVRPIALAKVMSIAQMMKTEFPGQDRSLSGIGGVESGSHAAEFILLGASTVQVCTGV 303
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRK 399
M+HGYG VK +C EL+ FM H F SIEDFRGAS+ YFTTH +LV+ Q+EA++ +K RK
Sbjct: 304 MLHGYGHVKTMCTELQAFMDKHGFISIEDFRGASLGYFTTHADLVQRQKEAVKIKKKQRK 363
Query: 400 GLQSDKDWTGDGFVKETLSMVSN 422
GL SDKDWTG+GFV ET +MVSN
Sbjct: 364 GLSSDKDWTGEGFVAETETMVSN 386
>gi|302761068|ref|XP_002963956.1| hypothetical protein SELMODRAFT_80950 [Selaginella moellendorffii]
gi|302769089|ref|XP_002967964.1| hypothetical protein SELMODRAFT_88846 [Selaginella moellendorffii]
gi|300164702|gb|EFJ31311.1| hypothetical protein SELMODRAFT_88846 [Selaginella moellendorffii]
gi|300167685|gb|EFJ34289.1| hypothetical protein SELMODRAFT_80950 [Selaginella moellendorffii]
Length = 411
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 295/410 (71%), Positives = 351/410 (85%), Gaps = 8/410 (1%)
Query: 16 SFAVNRRPG---LRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYT 72
+ A +RR G +P+RI + + A PDLS++VNGL++PNPFVIGSGPPGTNYT
Sbjct: 7 ALACDRRGGGFDRGIPTRIACS--SENLADGAPDLSVSVNGLRLPNPFVIGSGPPGTNYT 64
Query: 73 VMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRP 132
VMK+AFDEGWGAV++KT+SLD+ KVINVTPRYAR+R+G NG +IGWENIELISDRP
Sbjct: 65 VMKKAFDEGWGAVISKTLSLDSTKVINVTPRYARMRSG-NGPK--DVIGWENIELISDRP 121
Query: 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPE 192
ETML E ++LK YPD+ILI SIMEEY+K AWEE+I+RVE TG+DA+E+NFSCPHGMPE
Sbjct: 122 FETMLAELRRLKQEYPDRILIGSIMEEYDKDAWEEIIERVEATGVDALEINFSCPHGMPE 181
Query: 193 RKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINT 252
RKMGAAVG+DC LL EVC WINAKATVPVWAKMTPN+TDIT+PAR A+ +G EG+SAINT
Sbjct: 182 RKMGAAVGKDCDLLGEVCSWINAKATVPVWAKMTPNVTDITQPARTAIEAGCEGLSAINT 241
Query: 253 IMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSG 312
I S+MGI+L TLRPEPCVEGYSTPGGYS +AV PIAL KVM+IA+M+KSE+ D++ SLSG
Sbjct: 242 ITSIMGINLDTLRPEPCVEGYSTPGGYSSRAVRPIALAKVMAIAQMLKSEYPDRNISLSG 301
Query: 313 IGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
IGGVE+G +AAEFILLGANTVQVCTGVMM+GY LVKRLC+EL+ FM HNF+S++DFRG
Sbjct: 302 IGGVESGDNAAEFILLGANTVQVCTGVMMYGYPLVKRLCKELQAFMAKHNFTSLDDFRGT 361
Query: 373 SIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLSMVSN 422
S++Y TTHT+LV+ QQEAI+ R+A RKGL SDKDWTGDGFVKET MVSN
Sbjct: 362 SLQYMTTHTDLVQRQQEAIRSRRAARKGLASDKDWTGDGFVKETELMVSN 411
>gi|384247217|gb|EIE20704.1| Dihydroorotate oxidase [Coccomyxa subellipsoidea C-169]
Length = 428
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 283/379 (74%), Positives = 324/379 (85%), Gaps = 6/379 (1%)
Query: 45 PDLSIT-VNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
PDLSIT +GL++PNPFVIGSGPPGTNY VMK+AFDEGWGAV+AKTVSLD++KVINVTPR
Sbjct: 55 PDLSITHFSGLKLPNPFVIGSGPPGTNYQVMKKAFDEGWGAVIAKTVSLDSSKVINVTPR 114
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
YAR++A S K ++IGWENIELISDRPLE ML EFK+LK YPD+ILIASIMEEYNKA
Sbjct: 115 YARMKA----SDKKEVIGWENIELISDRPLEVMLDEFKRLKQEYPDRILIASIMEEYNKA 170
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
AWEELI R E+TG+DA E+NFSCPHGMPERKMG A+GQDC+LLEEVCGWINAKA+VPVWA
Sbjct: 171 AWEELIARCEQTGVDAFEINFSCPHGMPERKMGMAMGQDCQLLEEVCGWINAKASVPVWA 230
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
KMTPNITDIT PAR AL +G EGV+AINTI SVMGI+L TLRPEP VEGYSTPGGYS KA
Sbjct: 231 KMTPNITDITVPARTALAAGCEGVAAINTITSVMGINLDTLRPEPSVEGYSTPGGYSSKA 290
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
V PIAL KVMSIA+M+ SE+ +S IGGVETG DAAEFILLGAN+VQVCTGVM+HG
Sbjct: 291 VKPIALAKVMSIAQMVASEYGGAR-DVSAIGGVETGRDAAEFILLGANSVQVCTGVMLHG 349
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQS 403
Y LVK+LC L++FM H F+S+E+FRGAS+ YFTTH ELVRMQ+EA+ +K R GL
Sbjct: 350 YPLVKQLCGGLQEFMVQHGFNSVEEFRGASLPYFTTHHELVRMQREAVAAKKRARTGLSG 409
Query: 404 DKDWTGDGFVKETLSMVSN 422
D W+GDGFV+E SMV+N
Sbjct: 410 DDKWSGDGFVREAESMVAN 428
>gi|307106864|gb|EFN55109.1| hypothetical protein CHLNCDRAFT_31559 [Chlorella variabilis]
Length = 429
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 266/387 (68%), Positives = 330/387 (85%), Gaps = 4/387 (1%)
Query: 36 LASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAA 95
L + + ++ P L++ VNGL++PNPFVIGSGPPGTNY VMK+AF+EGWGAV+AKTVSLD++
Sbjct: 47 LVNGAVTSGPSLAVEVNGLKLPNPFVIGSGPPGTNYAVMKKAFEEGWGAVIAKTVSLDSS 106
Query: 96 KVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIAS 155
KVINVTPRYA++++ S ++IGWENIELISDRPLE ML+EFK+LKA +PD++LIAS
Sbjct: 107 KVINVTPRYAKMKS----SDGKEVIGWENIELISDRPLEVMLEEFKRLKAEFPDRVLIAS 162
Query: 156 IMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINA 215
IMEEYN+AAWEELI+R +E G+DA E+NFSCPHGMPER+MG A+GQDC LL EVCGWINA
Sbjct: 163 IMEEYNQAAWEELIERCQEAGVDAFEINFSCPHGMPERRMGMAMGQDCELLHEVCGWINA 222
Query: 216 KATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYST 275
K+T+PVWAKMTPN+TDI+ PAR AL +G EG++AINTI SVMGI+L TLRPEPCVEG++T
Sbjct: 223 KSTIPVWAKMTPNVTDISMPARTALAAGCEGIAAINTITSVMGINLDTLRPEPCVEGHTT 282
Query: 276 PGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQV 335
PGGYS +AV PIAL K MSIA+MM+ +F SLSG+GGV TG DAAEFILLG+NTVQV
Sbjct: 283 PGGYSSRAVKPIALAKCMSIAQMMRHDFPHSAASLSGLGGVNTGRDAAEFILLGSNTVQV 342
Query: 336 CTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRK 395
CTGVM++GY L+K+LC L+ FM+ H+F+S+E FRGAS+ YFTTH ELVRMQ+EA++ +K
Sbjct: 343 CTGVMLYGYPLIKKLCGGLQAFMQQHDFASVEQFRGASLPYFTTHHELVRMQREAVEAKK 402
Query: 396 AVRKGLQSDKDWTGDGFVKETLSMVSN 422
R GL D +W+GDGFV+E SMVSN
Sbjct: 403 KARVGLAKDDEWSGDGFVEEAESMVSN 429
>gi|255088383|ref|XP_002506114.1| predicted protein [Micromonas sp. RCC299]
gi|226521385|gb|ACO67372.1| predicted protein [Micromonas sp. RCC299]
Length = 434
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 259/378 (68%), Positives = 316/378 (83%), Gaps = 6/378 (1%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
PDLS+TVNGL+ PNPFVIGSGPPGTNYTVMK+AFDEGWG V+AKTVSL+A V NVTPRY
Sbjct: 62 PDLSVTVNGLKFPNPFVIGSGPPGTNYTVMKKAFDEGWGGVIAKTVSLNADLVKNVTPRY 121
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
A++++ +G+ +++GW+NIELISDR E ML EFKQLK YPD+ILIASIM+EY K
Sbjct: 122 AKMKS-EDGA---EVLGWQNIELISDRSFEVMLAEFKQLKEEYPDRILIASIMDEYKKEN 177
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ R EE G+DA E+NFSCPHGMPERKMGAA+GQDC +L+EVCGW+ ATVPVWAK
Sbjct: 178 WVEVVRRCEEVGVDAFEINFSCPHGMPERKMGAAMGQDCTVLDEVCGWVKEVATVPVWAK 237
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
MTPNITDITEPA V L G +G++AINTIMS+MG++L TL PEPCVEG+STPGGYS KAV
Sbjct: 238 MTPNITDITEPANVCLEKGMDGIAAINTIMSIMGVNLDTLAPEPCVEGHSTPGGYSYKAV 297
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL K M+IA+M+K EF D+ +LSGIGG++TGG AAEFILLG++TVQVCTGVM+HGY
Sbjct: 298 RPIALAKCMAIAQMIKKEFPDR--TLSGIGGIDTGGHAAEFILLGSDTVQVCTGVMIHGY 355
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSD 404
LV+ LC EL++FM H F SI +F+G S+EYFTTHT+LV Q+EAI+++K + G++SD
Sbjct: 356 PLVQNLCAELQEFMGKHGFESIAEFKGMSLEYFTTHTDLVARQKEAIEKKKKAKVGIESD 415
Query: 405 KDWTGDGFVKETLSMVSN 422
WTG+GFV ET SMVSN
Sbjct: 416 DKWTGEGFVAETESMVSN 433
>gi|302834385|ref|XP_002948755.1| hypothetical protein VOLCADRAFT_80405 [Volvox carteri f.
nagariensis]
gi|300265946|gb|EFJ50135.1| hypothetical protein VOLCADRAFT_80405 [Volvox carteri f.
nagariensis]
Length = 396
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 237/378 (62%), Positives = 297/378 (78%), Gaps = 7/378 (1%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ VNG+++PNPF+IGSGPPGTNY VMK+AFDEGWG V+ KT+SLD++KV+NVTPRYA
Sbjct: 24 DLSVEVNGMKLPNPFIIGSGPPGTNYQVMKKAFDEGWGGVICKTLSLDSSKVVNVTPRYA 83
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+LR ++ GW+N ELISDRP + M+ E K+L+ YP+++LIASIMEEYNK AW
Sbjct: 84 KLR-----DYSSRVFGWQNFELISDRPFDVMIAEMKRLREEYPNRVLIASIMEEYNKNAW 138
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EE+I R EE +DA E+NFSCPHG+PER+MG A+GQD +L EVCGWINA AT PVWAKM
Sbjct: 139 EEIIGRCEEINVDAFEINFSCPHGLPERRMGMAMGQDPEVLGEVCGWINAAATKPVWAKM 198
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+TDI PA VAL +G EGV+AINTI +MG++L TLRPEP VEGY+TPGGYS KAV
Sbjct: 199 TPNVTDIAYPAAVALAAGCEGVAAINTISCIMGVNLDTLRPEPSVEGYTTPGGYSWKAVK 258
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTV-QVCTGVMMHGY 344
PIAL K +IAK ++ +F + SLSGIGGVETG DAAEFILLG++TV QVCTGVM+HGY
Sbjct: 259 PIALAKCTAIAKTIQRDFAGEGKSLSGIGGVETGADAAEFILLGSDTVQQVCTGVMIHGY 318
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSD 404
+VK LC L+ FM H F S+ +F+G S+ Y T H+ELV Q+E+I+ +K R GL +D
Sbjct: 319 PVVKNLCGGLQRFMTKHGFKSVAEFKGLSLPYVTVHSELVSRQRESIRAKKQ-RVGLAND 377
Query: 405 KDWTGDGFVKETLSMVSN 422
+W+G+ FVK SMV+N
Sbjct: 378 AEWSGEDFVKNAESMVAN 395
>gi|223938296|ref|ZP_03630191.1| dihydroorotate dehydrogenase family protein [bacterium Ellin514]
gi|223893010|gb|EEF59476.1| dihydroorotate dehydrogenase family protein [bacterium Ellin514]
Length = 374
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 227/374 (60%), Positives = 294/374 (78%), Gaps = 9/374 (2%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
P L+ TV+GL++PNPF+IGSGPPGTN V+ +AF EGWGAV+AKTVSLD++KV+NVTPRY
Sbjct: 2 PTLATTVDGLKLPNPFIIGSGPPGTNLNVITKAFKEGWGAVIAKTVSLDSSKVVNVTPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
A+L A + G++IGWENIELISDRP ++EFK+ K +PD +LIASIMEEY K
Sbjct: 62 AKLLANS-----GEVIGWENIELISDRPFHLWIEEFKKCKDQFPDGVLIASIMEEYRKDG 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E+++R ++ G+DA E+NFSCPHG+PERKMGAA+GQD +L+EVCGW+ + A PVWAK
Sbjct: 117 WIEIVERCQDAGVDAFELNFSCPHGLPERKMGAAMGQDPDVLKEVCGWVKSAAKKPVWAK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
MTPN+T I +P+R AL G+ G+SAINTI SV G++L TLRPEP VEGY+TPGGYSCKAV
Sbjct: 177 MTPNVTHIEDPSRAALLGGATGLSAINTIRSVTGVNLDTLRPEPTVEGYTTPGGYSCKAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL VM IA+M++ EF + SLSG+GG+E+G DAA+FILLG++TVQVCTGVM GY
Sbjct: 237 KPIALRMVMEIAQMIRKEFPGR--SLSGLGGIESGNDAAQFILLGSDTVQVCTGVMKFGY 294
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQE--AIQQRKAVRKGLQ 402
VK +CEEL +FM H F ++ DF+G S++YFTTH +LV+ Q E A Q+ + +K +
Sbjct: 295 ECVKPMCEELLNFMAKHKFETLADFKGKSLDYFTTHADLVKRQTERKAAQKAASTKKVVT 354
Query: 403 SDKDWTGDGFVKET 416
SD +W GD FVK++
Sbjct: 355 SDGEWHGDEFVKQS 368
>gi|159471299|ref|XP_001693794.1| psbA translation factor [Chlamydomonas reinhardtii]
gi|158283297|gb|EDP09048.1| psbA translation factor [Chlamydomonas reinhardtii]
Length = 431
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/400 (55%), Positives = 285/400 (71%), Gaps = 32/400 (8%)
Query: 36 LASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAK---TVSL 92
L ++ PDLS+ VNG+++PNPF+IGSGPPGTNY VMK+AFDEGWG V+ K T+SL
Sbjct: 50 LVDGRVTSGPDLSVEVNGMKLPNPFIIGSGPPGTNYQVMKKAFDEGWGGVICKASPTLSL 109
Query: 93 DAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKIL 152
D++KV+NVTPRYA++R +N ++ GW+N ELISDRP + ML E K+L+ YP+++L
Sbjct: 110 DSSKVVNVTPRYAKIRDYSN-----RVFGWQNFELISDRPFDVMLAEMKRLREEYPNRML 164
Query: 153 IASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGW 212
IASIMEEYNK AWEE+I R EE +DA E+NFSCPHG+PER+MG A+GQD +L EVCGW
Sbjct: 165 IASIMEEYNKDAWEEIIGRCEEIKVDAFEINFSCPHGLPERRMGMAMGQDPEVLGEVCGW 224
Query: 213 INAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSV-------MGIDLKTLR 265
IN ATVPVWAKMTPN+TDI+ PA VAL++G EGV+AINTI + G D++ L
Sbjct: 225 INKAATVPVWAKMTPNVTDISFPADVALKAGCEGVAAINTIQCISATHYIGAGHDMRMLG 284
Query: 266 PEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFND---KDYSLSGIGGVETGGDA 322
P V HP +G + + + +D SLSGIGGVETGGDA
Sbjct: 285 GGPPVH-------------HPPGIGWLRAATAPGLAAASDVHLSRRSLSGIGGVETGGDA 331
Query: 323 AEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTE 382
AEFILLG++TVQVCTGVM+HGY +VK LC L+ FM+ H+F SI +F+G S+ Y T H+E
Sbjct: 332 AEFILLGSDTVQVCTGVMIHGYPVVKNLCGGLQKFMQKHDFKSIAEFKGKSLPYVTVHSE 391
Query: 383 LVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLSMVSN 422
LV+ Q++AI +KA R+GL +D +W+G+ FVK SM N
Sbjct: 392 LVKRQRDAISAKKA-RQGLANDAEWSGEDFVKNADSMAVN 430
>gi|388499732|gb|AFK37932.1| unknown [Lotus japonicus]
Length = 233
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/233 (87%), Positives = 219/233 (93%)
Query: 190 MPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSA 249
MPERKMGAAVGQDC LLEEVC WINAKATVPVWAKMTPNITDI+EPARVAL SG EGV+A
Sbjct: 1 MPERKMGAAVGQDCALLEEVCRWINAKATVPVWAKMTPNITDISEPARVALSSGCEGVAA 60
Query: 250 INTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYS 309
INTIMSVMGI+L TLRPEPCVEGYSTPGGYS KAVHPIAL KVMSIAKMMKSEF+ +DYS
Sbjct: 61 INTIMSVMGINLNTLRPEPCVEGYSTPGGYSAKAVHPIALAKVMSIAKMMKSEFDSEDYS 120
Query: 310 LSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDF 369
LS IGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVK+LC EL+DFMK HNF+SIEDF
Sbjct: 121 LSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCVELQDFMKKHNFTSIEDF 180
Query: 370 RGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLSMVSN 422
RG S++YFTTHT+LV+ QQEAI+QRKA+RKGLQSD+DWTGDGFVKE+ SMVSN
Sbjct: 181 RGTSLQYFTTHTDLVQRQQEAIRQRKAIRKGLQSDRDWTGDGFVKESESMVSN 233
>gi|383767594|ref|YP_005446576.1| dihydropyrimidine dehydrogenase [Phycisphaera mikurensis NBRC
102666]
gi|381387863|dbj|BAM04679.1| dihydropyrimidine dehydrogenase [Phycisphaera mikurensis NBRC
102666]
Length = 394
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/394 (52%), Positives = 271/394 (68%), Gaps = 29/394 (7%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
P L TV+G+ PNPF+IGSGPPGTN V+K+AF EGWG V+AKTVSLDA+KV NV PRY
Sbjct: 2 PTLETTVDGITFPNPFLIGSGPPGTNQKVIKKAFQEGWGGVIAKTVSLDASKVTNVAPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+L G K ++ GWENIELI+ E L +F+ K YPD+ LIASIMEE+++ A
Sbjct: 62 GKL----TGENKKEVFGWENIELIATTSFEDWLDDFRACKDAYPDRPLIASIMEEHSRDA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ R EE G+D E+NFSCPHG+PERKMGAA+G++ L+EEV GW+ A A+ PVWAK
Sbjct: 118 WAEVVGRCEEAGVDGFELNFSCPHGLPERKMGAAMGENPDLVEEVTGWVMAAASTPVWAK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
MTPN+T I +P+R AL +G+ GVS INTI S++G+DLK+LRP P VEG++TPGGYS AV
Sbjct: 178 MTPNVTRIEDPSRAALSAGAHGVSVINTIRSIIGVDLKSLRPMPTVEGHTTPGGYSSVAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL VM +++ ++F + S G +ETG DAAEFILLGA+TVQVCTGVM GY
Sbjct: 238 KPIALRMVMECRRLIDADFGGRSISGIGG--IETGHDAAEFILLGADTVQVCTGVMKKGY 295
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVR------ 398
++ + EEL FM H F +++DF+G ++ Y TTH ELVR+Q EA Q RK R
Sbjct: 296 RMIGPMLEELLGFMDQHGFETLDDFKGHAVPYVTTHAELVRLQAEA-QDRKRARVAEEMA 354
Query: 399 ----------------KGLQSDKDWTGDGFVKET 416
+ + D++W D FV+++
Sbjct: 355 LKEKAKAQEELIAAGKEAVVRDENWDEDAFVEQS 388
>gi|149919740|ref|ZP_01908217.1| dihydroorotate dehydrogenase family protein [Plesiocystis pacifica
SIR-1]
gi|149819347|gb|EDM78778.1| dihydroorotate dehydrogenase family protein [Plesiocystis pacifica
SIR-1]
Length = 366
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/376 (52%), Positives = 274/376 (72%), Gaps = 14/376 (3%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L++ VNG++ NPF++GSGPPGTN V+ ++FD GWG V KT+SLD +KVIN PRYA+
Sbjct: 5 LNVVVNGMEFDNPFLLGSGPPGTNAKVIMKSFDLGWGGNVCKTISLDHSKVINTNPRYAK 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
LR N ++IG+ENIELISDRP + L+EF+++K YP IL+ASIMEEY K AW+
Sbjct: 65 LRDPQNHK---RVIGFENIELISDRPFDVWLEEFREIKKRYPKHILVASIMEEYRKEAWQ 121
Query: 167 ELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMT 226
E+++RV+ TG+DA E+N SCPHG+PER+MGAA+G D ++ EV GW+ +T+PVWAKMT
Sbjct: 122 EMVERVQATGVDAFEMNLSCPHGLPERRMGAAMGGDPEIVREVVGWVKEVSTIPVWAKMT 181
Query: 227 PNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHP 286
PN+ D+T + A+ +G++G+SAINTI+SV+G+DL TL+P P VEGY+TPGGYS A P
Sbjct: 182 PNVGDVTASPKAAVAAGADGISAINTILSVIGVDLDTLKPMPTVEGYTTPGGYSGMAARP 241
Query: 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGL 346
IAL VM IA+ + + ++SG+GG+ +GGDAA+F+ LG++TVQVCTG M+ GY +
Sbjct: 242 IALRHVMEIARAL------PETTISGMGGIYSGGDAAQFVALGSHTVQVCTGAMLQGYKV 295
Query: 347 VKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKD 406
V +L EEL ++ H SS+E+ RG ++ +FTTH +LV QQ A +K + G + +
Sbjct: 296 VSKLKEELLAVLEKHGMSSLEELRGKALPHFTTHADLVERQQAA---KKEIGLG-RDNTT 351
Query: 407 WTGDGFVKETLSMVSN 422
W GD KET S+ +N
Sbjct: 352 WQGD-IDKETDSLTAN 366
>gi|307102243|gb|EFN50585.1| hypothetical protein CHLNCDRAFT_55724 [Chlorella variabilis]
Length = 349
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 168/245 (68%), Positives = 205/245 (83%)
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
WEELI+R +E G+DA E+NFSCPHGMPER+MG A+GQDC LL EVCGWINAK+T+PVWAK
Sbjct: 1 WEELIERCQEAGVDAFEINFSCPHGMPERRMGMAMGQDCELLHEVCGWINAKSTIPVWAK 60
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
MTPN+TDI+ PAR AL +G EG++AINTI SVMGI+L TLRPEPCVEG++TPGGYS +AV
Sbjct: 61 MTPNVTDISMPARTALAAGCEGIAAINTITSVMGINLDTLRPEPCVEGHTTPGGYSSRAV 120
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL K MSIA+MM+ +F SLSG+GGV TG DAAEFILLG+NTVQVCTGVM++GY
Sbjct: 121 KPIALAKCMSIAQMMRHDFPHSAASLSGLGGVNTGRDAAEFILLGSNTVQVCTGVMLYGY 180
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSD 404
L+K+LC L+ FM+ H+F+S+E FRGAS+ YFTTH ELVRMQ+EA++ +K R GL D
Sbjct: 181 PLIKKLCGGLQAFMQQHDFASVEQFRGASLPYFTTHHELVRMQREAVEAKKKARVGLAKD 240
Query: 405 KDWTG 409
+W G
Sbjct: 241 DEWIG 245
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 67/74 (90%)
Query: 36 LASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAA 95
L + + ++ P L++ VNGL++PNPFVIGSGPPGTNY VMK+AF+EGWGAV+AKTVSLD++
Sbjct: 271 LVNGAVTSGPSLAVEVNGLKLPNPFVIGSGPPGTNYAVMKKAFEEGWGAVIAKTVSLDSS 330
Query: 96 KVINVTPRYARLRA 109
KVINVTPRYA++++
Sbjct: 331 KVINVTPRYAKMKS 344
>gi|19908880|gb|AAM03044.1| putative dihydroorotate dehydrogenase [Oryza sativa Japonica Group]
Length = 201
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 164/202 (81%), Positives = 181/202 (89%), Gaps = 1/202 (0%)
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
+ +MTPNITDIT PAR++L+SG EGVSAINTIMSVMGI+LKTLRPEPCVEGYSTPGGYS
Sbjct: 1 LQCQMTPNITDITRPARISLKSGCEGVSAINTIMSVMGINLKTLRPEPCVEGYSTPGGYS 60
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
+AVHPIAL KVM IA+MMK EF D SLS IGGVETG DAAEFILLGA+TVQVCTGVM
Sbjct: 61 ARAVHPIALAKVMQIARMMKEEFADGQ-SLSAIGGVETGNDAAEFILLGADTVQVCTGVM 119
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKG 400
MHGYGLVK+LC EL+DFM+ HNFSSIEDFRGAS+ YFTTHT+LV Q+EAI QRKA+RKG
Sbjct: 120 MHGYGLVKKLCAELQDFMRQHNFSSIEDFRGASLPYFTTHTDLVHRQREAINQRKAIRKG 179
Query: 401 LQSDKDWTGDGFVKETLSMVSN 422
L+SDKDWTGDGFVKET SMVSN
Sbjct: 180 LESDKDWTGDGFVKETESMVSN 201
>gi|83584365|gb|ABC24957.1| plastid dihydroorotate dehydrogenase [Prototheca wickerhamii]
Length = 262
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 167/237 (70%), Positives = 194/237 (81%), Gaps = 4/237 (1%)
Query: 36 LASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAA 95
L + + ++ PDLS+ VNGLQ+PNPFVIGSGPPGTNY VMKRAF+EGWGAV+AKTVSLD++
Sbjct: 19 LVNGAVASGPDLSVEVNGLQLPNPFVIGSGPPGTNYAVMKRAFEEGWGAVIAKTVSLDSS 78
Query: 96 KVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIAS 155
KVINVTPRYA++ A +IGWENIELISDRP TML EFK+LKA +PD+ILIAS
Sbjct: 79 KVINVTPRYAKMYA----PGTKDVIGWENIELISDRPFGTMLAEFKRLKAEFPDRILIAS 134
Query: 156 IMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINA 215
IMEE NK AWEE++ R EE G+D E+NFSCPHGMPER+MG A+GQD LL EVC W+NA
Sbjct: 135 IMEEVNKNAWEEIVGRCEEAGVDGFEINFSCPHGMPERQMGMAMGQDPELLSEVCSWVNA 194
Query: 216 KATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG 272
AT+PVWAKMTPNITDI PA AL +G EGVSAINTI SV GIDL TLRP+P V+G
Sbjct: 195 LATIPVWAKMTPNITDIAVPAGAALAAGCEGVSAINTITSVAGIDLGTLRPQPSVQG 251
>gi|269148153|gb|ACZ28457.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148155|gb|ACZ28458.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148165|gb|ACZ28463.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148175|gb|ACZ28468.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148177|gb|ACZ28469.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148181|gb|ACZ28471.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148189|gb|ACZ28475.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148191|gb|ACZ28476.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148195|gb|ACZ28478.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148197|gb|ACZ28479.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148199|gb|ACZ28480.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148201|gb|ACZ28481.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148203|gb|ACZ28482.1| dihydroorotate dehydrogenase-like protein [Melampyrum sylvaticum]
gi|269148205|gb|ACZ28483.1| dihydroorotate dehydrogenase-like protein [Melampyrum sylvaticum]
gi|269148213|gb|ACZ28487.1| dihydroorotate dehydrogenase-like protein [Melampyrum sylvaticum]
gi|269148215|gb|ACZ28488.1| dihydroorotate dehydrogenase-like protein [Melampyrum sylvaticum]
Length = 159
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 141/159 (88%), Positives = 153/159 (96%)
Query: 63 GSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGW 122
GSGPPGTN+ VMKRAFD+GWGAV+AKTVSLDA KV+NVTPRYA+LRAGANGSA GQ+IGW
Sbjct: 1 GSGPPGTNHKVMKRAFDDGWGAVIAKTVSLDAGKVVNVTPRYAKLRAGANGSALGQVIGW 60
Query: 123 ENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEV 182
+NIELISDRPLETMLKEFKQLK YPD+ILIASIMEEYNKAAWEELIDRVE+TGIDAIE+
Sbjct: 61 QNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGIDAIEI 120
Query: 183 NFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
NFSCPHGMPERKMGAAVGQDC LLEE+CGW+NAKATVPV
Sbjct: 121 NFSCPHGMPERKMGAAVGQDCVLLEEICGWVNAKATVPV 159
>gi|269148145|gb|ACZ28453.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148147|gb|ACZ28454.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148149|gb|ACZ28455.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148151|gb|ACZ28456.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148157|gb|ACZ28459.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148159|gb|ACZ28460.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148161|gb|ACZ28461.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148163|gb|ACZ28462.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148167|gb|ACZ28464.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148169|gb|ACZ28465.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148171|gb|ACZ28466.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148173|gb|ACZ28467.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148179|gb|ACZ28470.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148183|gb|ACZ28472.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148185|gb|ACZ28473.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148187|gb|ACZ28474.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148193|gb|ACZ28477.1| dihydroorotate dehydrogenase-like protein [Melampyrum italicum]
gi|269148207|gb|ACZ28484.1| dihydroorotate dehydrogenase-like protein [Melampyrum sylvaticum]
gi|269148209|gb|ACZ28485.1| dihydroorotate dehydrogenase-like protein [Melampyrum sylvaticum]
gi|269148217|gb|ACZ28489.1| dihydroorotate dehydrogenase-like protein [Melampyrum sylvaticum]
gi|269148219|gb|ACZ28490.1| dihydroorotate dehydrogenase-like protein [Melampyrum sylvaticum]
Length = 159
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 141/159 (88%), Positives = 153/159 (96%)
Query: 63 GSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGW 122
GSGPPGTN+ VMKRAFD+GWGAV+AKTVSLDA KV+NVTPRYA+LRAGANGSA GQ+IGW
Sbjct: 1 GSGPPGTNHKVMKRAFDDGWGAVIAKTVSLDAEKVVNVTPRYAKLRAGANGSALGQVIGW 60
Query: 123 ENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEV 182
+NIELISDRPLETMLKEFKQLK YPD+ILIASIMEEYNKAAWEELIDRVE+TGIDAIE+
Sbjct: 61 QNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGIDAIEI 120
Query: 183 NFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
NFSCPHGMPERKMGAAVGQDC LLEE+CGW+NAKATVPV
Sbjct: 121 NFSCPHGMPERKMGAAVGQDCVLLEEICGWVNAKATVPV 159
>gi|269148211|gb|ACZ28486.1| dihydroorotate dehydrogenase-like protein [Melampyrum sylvaticum]
Length = 159
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 140/159 (88%), Positives = 152/159 (95%)
Query: 63 GSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGW 122
GSGPPGTN+ VMKRAFD+GWGAV+ KTVSLDA KV+NVTPRYA+LRAGANGSA GQ+IGW
Sbjct: 1 GSGPPGTNHKVMKRAFDDGWGAVITKTVSLDAGKVVNVTPRYAKLRAGANGSALGQVIGW 60
Query: 123 ENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEV 182
+NIELISDRPLETMLKEFKQLK YPD+ILIASIMEEYNKAAWEELIDRVE+TGIDAIE+
Sbjct: 61 QNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGIDAIEI 120
Query: 183 NFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
NFSCPHGMPERKMGAAVGQDC LLEE+CGW+NAKATVPV
Sbjct: 121 NFSCPHGMPERKMGAAVGQDCVLLEEICGWVNAKATVPV 159
>gi|398830921|ref|ZP_10589102.1| dihydroorotate dehydrogenase family protein [Phyllobacterium sp.
YR531]
gi|398213501|gb|EJN00095.1| dihydroorotate dehydrogenase family protein [Phyllobacterium sp.
YR531]
Length = 436
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 213/358 (59%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSSNFLGIKSPNPFWLASAPPTDKAYNVERAFAAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA +++G NIELI+DRPLE L+E ++K +PD+ LIASIM + A
Sbjct: 63 -----GAIHGPDRRLLGLNNIELITDRPLEVNLREMTEVKKKWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ RVEETG D IE+NF CPHGM ER MGAAVGQ +E V W +PV K
Sbjct: 118 WKAILPRVEETGCDGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PAR A G++ VS INTI S++ +DL T P P ++G + GGY AV
Sbjct: 178 LTPNITDVRKPARAAKSGGTDAVSLINTINSIVSVDLDTFAPNPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ + +SGIGG+ T DAAEFI LG VQVCT M +G+
Sbjct: 238 KPIALNMVAEIARDAET----RGLPISGIGGITTWRDAAEFIALGCGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L D+M FSSIEDFRG ++ T + L + + I Q ++ G
Sbjct: 294 KVVQEMISGLSDWMDSRGFSSIEDFRGMAVPNVTDWQYLNLNYITKAQIDQDLCIKCG 351
>gi|261221504|ref|ZP_05935785.1| dihydropyrimidine dehydrogenase [Brucella ceti B1/94]
gi|265997467|ref|ZP_06110024.1| dihydropyrimidine dehydrogenase [Brucella ceti M490/95/1]
gi|260920088|gb|EEX86741.1| dihydropyrimidine dehydrogenase [Brucella ceti B1/94]
gi|262551935|gb|EEZ07925.1| dihydropyrimidine dehydrogenase [Brucella ceti M490/95/1]
Length = 436
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K++K +PD+ LIASIM + A
Sbjct: 63 -----GAIHGADRRLLGLNNIELITDRPLEINLREMKEVKMRWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ + V W + +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVKWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PAR A +G++ VS INTI S++ +DL T+ P P ++G + GGY AV
Sbjct: 178 LTPNITDVRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + S+SGIGG+ T DAAEFI LG TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DAETAGLSISGIGGITTWRDAAEFIALGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M + +++DF+G ++ + T + L + + I Q ++ G
Sbjct: 294 KVVQEMIDGLSDWMDSKGYQTLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCG 351
>gi|265983446|ref|ZP_06096181.1| dihydropyrimidine dehydrogenase [Brucella sp. 83/13]
gi|306838284|ref|ZP_07471130.1| dihydroorotate dehydrogenase family protein [Brucella sp. NF 2653]
gi|264662038|gb|EEZ32299.1| dihydropyrimidine dehydrogenase [Brucella sp. 83/13]
gi|306406575|gb|EFM62808.1| dihydroorotate dehydrogenase family protein [Brucella sp. NF 2653]
Length = 436
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K++K +PD+ LIASIM + A
Sbjct: 63 -----GAIHGADRRLLGLNNIELITDRPLEINLREMKEVKMRWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ + V W + +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVKWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A +G++ VS INTI S++ +DL T+ P P ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGGV T DAAEFI LG TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DAETAGLPISGIGGVTTWRDAAEFIALGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M + +++DF+G ++ + T + L + + I Q ++ G
Sbjct: 294 KVVQEMIDGLSDWMDSKGYQTLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCG 351
>gi|23501189|ref|NP_697316.1| dihydropyrimidine dehydrogenase [Brucella suis 1330]
gi|161618261|ref|YP_001592148.1| dihydropyrimidine dehydrogenase [Brucella canis ATCC 23365]
gi|260567096|ref|ZP_05837566.1| dihydropyrimidine dehydrogenase [Brucella suis bv. 4 str. 40]
gi|261754289|ref|ZP_05997998.1| dihydropyrimidine dehydrogenase [Brucella suis bv. 3 str. 686]
gi|376274951|ref|YP_005115390.1| dihydropyrimidine dehydrogenase [Brucella canis HSK A52141]
gi|376279978|ref|YP_005153984.1| dihydropyrimidine dehydrogenase [Brucella suis VBI22]
gi|384223972|ref|YP_005615136.1| dihydropyrimidine dehydrogenase [Brucella suis 1330]
gi|23347067|gb|AAN29231.1| dihydroorotate dehydrogenase family protein [Brucella suis 1330]
gi|161335072|gb|ABX61377.1| dihydroorotate dehydrogenase family protein [Brucella canis ATCC
23365]
gi|260156614|gb|EEW91694.1| dihydropyrimidine dehydrogenase [Brucella suis bv. 4 str. 40]
gi|261744042|gb|EEY31968.1| dihydropyrimidine dehydrogenase [Brucella suis bv. 3 str. 686]
gi|343382152|gb|AEM17644.1| dihydropyrimidine dehydrogenase [Brucella suis 1330]
gi|358257577|gb|AEU05312.1| dihydropyrimidine dehydrogenase [Brucella suis VBI22]
gi|363403518|gb|AEW13813.1| dihydropyrimidine dehydrogenase [Brucella canis HSK A52141]
Length = 436
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNDPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K++K +PD+ LIASIM + A
Sbjct: 63 -----GAIHGADRRLLGLNNIELITDRPLEINLREMKEVKMRWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ + V W + +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVKWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A +G++ VS INTI S++ +DL T+ P P ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGG+ T DAAEFI LG TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DAETAGLPISGIGGITTWRDAAEFIALGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M + +++DF+G ++ + T + L + + I Q ++ G
Sbjct: 294 KVVQEMIDGLSDWMDSKGYQTLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCG 351
>gi|306844922|ref|ZP_07477504.1| dihydroorotate dehydrogenase family protein [Brucella inopinata
BO1]
gi|306274751|gb|EFM56535.1| dihydroorotate dehydrogenase family protein [Brucella inopinata
BO1]
Length = 436
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K++K +PD+ LIASIM + A
Sbjct: 63 -----GAIHGADRRLLGLNNIELITDRPLEINLREMKEVKMRWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ + V W + +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVKWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A +G++ VS INTI S++ +DL T+ P P ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGG+ T DAAEFI LG TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DAETAGLPISGIGGITTWRDAAEFIALGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M + +++DF+G ++ + T + L + + I Q ++ G
Sbjct: 294 KVVQEMIDGLSDWMDSKGYQTLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCG 351
>gi|260754066|ref|ZP_05866414.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 6 str. 870]
gi|260674174|gb|EEX60995.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 6 str. 870]
Length = 436
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K++K +PD+ LIASIM + A
Sbjct: 63 -----GAIHGADQRLLGLNNIELITDRPLEINLREMKEVKMRWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ + V W + +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVKWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A +G++ VS INTI S++ +DL T+ P P ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGG+ T DAAEFI LG TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DAETAGLPISGIGGITTWRDAAEFIALGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M + +++DF+G ++ + T + L + + I Q ++ G
Sbjct: 294 KVVQEMIDGLSDWMDSKGYQTLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCG 351
>gi|163842566|ref|YP_001626970.1| dihydropyrimidine dehydrogenase [Brucella suis ATCC 23445]
gi|163673289|gb|ABY37400.1| dihydroorotate dehydrogenase family protein [Brucella suis ATCC
23445]
Length = 436
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K++K +PD+ LIASIM + A
Sbjct: 63 -----GAIHGADRRLLGLNNIELITDRPLEINLREMKEVKMRWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ + V W + +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVKWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A +G++ VS INTI S++ +DL T+ P P ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGG+ T DAAEFI LG TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DAETAGLPISGIGGITTWRDAAEFIALGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M + +++DF+G ++ + T + L + + I Q ++ G
Sbjct: 294 KVVQEMIDGLSDWMDSKGYQTLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCG 351
>gi|62289276|ref|YP_221069.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 1 str. 9-941]
gi|82699207|ref|YP_413781.1| dihydropyrimidine dehydrogenase [Brucella melitensis biovar Abortus
2308]
gi|189023530|ref|YP_001934298.1| dihydropyrimidine dehydrogenase [Brucella abortus S19]
gi|237814768|ref|ZP_04593766.1| dihydroorotate dehydrogenase family protein [Brucella abortus str.
2308 A]
gi|260545967|ref|ZP_05821708.1| dihydropyrimidine dehydrogenase [Brucella abortus NCTC 8038]
gi|260757288|ref|ZP_05869636.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 4 str. 292]
gi|260761110|ref|ZP_05873453.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 2 str.
86/8/59]
gi|260883093|ref|ZP_05894707.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 9 str. C68]
gi|261324422|ref|ZP_05963619.1| dihydropyrimidine dehydrogenase [Brucella neotomae 5K33]
gi|297247693|ref|ZP_06931411.1| dihydropyrimidine dehydrogenase (NADP+) [Brucella abortus bv. 5
str. B3196]
gi|376273965|ref|YP_005152543.1| dihydropyrimidine dehydrogenase [Brucella abortus A13334]
gi|423167547|ref|ZP_17154250.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI435a]
gi|423170077|ref|ZP_17156752.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI474]
gi|423173843|ref|ZP_17160514.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI486]
gi|423176872|ref|ZP_17163518.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI488]
gi|423179510|ref|ZP_17166151.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI010]
gi|423182640|ref|ZP_17169277.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI016]
gi|423186417|ref|ZP_17173031.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI021]
gi|423191145|ref|ZP_17177753.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI259]
gi|62195408|gb|AAX73708.1| dihydroorotate dehydrogenase family protein [Brucella abortus bv. 1
str. 9-941]
gi|82615308|emb|CAJ10269.1| Legume lectin, beta domain:Dihydroorotate dehydrogenase:4Fe-4S
ferredoxin, iron-sulfur binding domain:FMN/related
compound-bi [Brucella melitensis biovar Abortus 2308]
gi|189019102|gb|ACD71824.1| dihydropyrimidine dehydrogenase [Brucella abortus S19]
gi|237789605|gb|EEP63815.1| dihydroorotate dehydrogenase family protein [Brucella abortus str.
2308 A]
gi|260097374|gb|EEW81249.1| dihydropyrimidine dehydrogenase [Brucella abortus NCTC 8038]
gi|260667606|gb|EEX54546.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 4 str. 292]
gi|260671542|gb|EEX58363.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 2 str.
86/8/59]
gi|260872621|gb|EEX79690.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 9 str. C68]
gi|261300402|gb|EEY03899.1| dihydropyrimidine dehydrogenase [Brucella neotomae 5K33]
gi|297174862|gb|EFH34209.1| dihydropyrimidine dehydrogenase (NADP+) [Brucella abortus bv. 5
str. B3196]
gi|363401571|gb|AEW18541.1| dihydropyrimidine dehydrogenase (NADP+) [Brucella abortus A13334]
gi|374540981|gb|EHR12480.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI435a]
gi|374541589|gb|EHR13084.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI486]
gi|374542313|gb|EHR13802.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI474]
gi|374551029|gb|EHR22464.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI010]
gi|374551486|gb|EHR22920.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI016]
gi|374552622|gb|EHR24045.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI488]
gi|374553835|gb|EHR25249.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI259]
gi|374558096|gb|EHR29490.1| dihydroorotate dehydrogenase [Brucella abortus bv. 1 str. NI021]
Length = 436
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K++K +PD+ LIASIM + A
Sbjct: 63 -----GAIHGADRRLLGLNNIELITDRPLEINLREMKEVKMRWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ + V W + +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVKWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A +G++ VS INTI S++ +DL T+ P P ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGG+ T DAAEFI LG TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DAETAGLPISGIGGITTWRDAAEFIALGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M + +++DF+G ++ + T + L + + I Q ++ G
Sbjct: 294 KVVQEMIDGLSDWMDSKGYQTLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCG 351
>gi|256368743|ref|YP_003106249.1| dihydropyrimidine dehydrogenase [Brucella microti CCM 4915]
gi|255998901|gb|ACU47300.1| dihydropyrimidine dehydrogenase [Brucella microti CCM 4915]
Length = 436
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGLPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K++K +PD+ LIASIM + A
Sbjct: 63 -----GAIHGADRRLLGLNNIELITDRPLEINLREMKEVKMRWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ + V W + +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVKWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A +G++ VS INTI S++ +DL T+ P P ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGG+ T DAAEFI LG TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DAETAGLPISGIGGITTWRDAAEFIALGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M + +++DF+G ++ + T + L + + I Q ++ G
Sbjct: 294 KVVQEMIDGLSDWMDSKGYQTLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCG 351
>gi|261218305|ref|ZP_05932586.1| dihydropyrimidine dehydrogenase [Brucella ceti M13/05/1]
gi|261320846|ref|ZP_05960043.1| dihydropyrimidine dehydrogenase [Brucella ceti M644/93/1]
gi|260923394|gb|EEX89962.1| dihydropyrimidine dehydrogenase [Brucella ceti M13/05/1]
gi|261293536|gb|EEX97032.1| dihydropyrimidine dehydrogenase [Brucella ceti M644/93/1]
Length = 436
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K++K +PD+ LIASIM + A
Sbjct: 63 -----GAMHGADRRLLGLNNIELITDRPLEINLREMKEVKMRWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ + V W + +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVKWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PAR A +G++ VS INTI S++ +DL T+ P P ++G + GGY AV
Sbjct: 178 LTPNITDVRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGG+ T DAAEFI LG TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DAETAGLPISGIGGITTWRDAAEFIALGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M + +++DF+G ++ + T + L + + I Q ++ G
Sbjct: 294 KVVQEMIDGLSDWMDSKGYQTLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCG 351
>gi|374311596|ref|YP_005058026.1| dihydroorotate dehydrogenase family protein [Granulicella mallensis
MP5ACTX8]
gi|358753606|gb|AEU36996.1| dihydroorotate dehydrogenase family protein [Granulicella mallensis
MP5ACTX8]
Length = 471
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/369 (42%), Positives = 217/369 (58%), Gaps = 19/369 (5%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
P L T G++ NPF + S PP + RAFD GWG V KT+ + NV+ RY
Sbjct: 2 PTLETTFAGIKCLNPFWLASAPPTNCGEQIMRAFDAGWGGAVWKTI---GEPITNVSSRY 58
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ + NG +++G+ NIELISDRP+E L+E ++K YP ++IAS+M E +
Sbjct: 59 SSI--DWNGQ---KMMGFNNIELISDRPIEVNLREISEVKRRYPKHVVIASLMVESKRET 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W +++ R E+ G D +E+NF CPHGM ER MG+AVGQ E++ GW+ KA PV K
Sbjct: 114 WHDIVQRAEDAGADGLELNFGCPHGMSERGMGSAVGQVPEYCEQITGWVKEKARTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNI+DI PAR A R G++ +SAINTI S+ IDL TL P P V+G S+ GGY AV
Sbjct: 174 LTPNISDIRIPARAAKRGGADALSAINTINSITSIDLDTLEPRPMVDGKSSHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL M++ +D D +L SGIGG+ T DAAEFILLG+ TVQVCT M +
Sbjct: 234 KPIAL-------NMVQQVMSDPDAALPMSGIGGIGTWQDAAEFILLGSGTVQVCTAAMHY 286
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
GY +V+ + + L+ +M+ + +++DFRG S+ H L I + K +
Sbjct: 287 GYRIVEDMADGLQSWMRRKGYETLDDFRGLSLPKVREWKHLNLNYKVVARIHESKCIGCD 346
Query: 401 LQSDKDWTG 409
L W G
Sbjct: 347 LCYTACWDG 355
>gi|225626809|ref|ZP_03784848.1| dihydroorotate dehydrogenase family protein [Brucella ceti str.
Cudo]
gi|261315465|ref|ZP_05954662.1| dihydropyrimidine dehydrogenase [Brucella pinnipedialis M163/99/10]
gi|261316968|ref|ZP_05956165.1| dihydropyrimidine dehydrogenase [Brucella pinnipedialis B2/94]
gi|261757524|ref|ZP_06001233.1| dihydropyrimidine dehydrogenase [Brucella sp. F5/99]
gi|265988004|ref|ZP_06100561.1| dihydropyrimidine dehydrogenase [Brucella pinnipedialis M292/94/1]
gi|340789928|ref|YP_004755392.1| dihydropyrimidine dehydrogenase [Brucella pinnipedialis B2/94]
gi|225618466|gb|EEH15509.1| dihydroorotate dehydrogenase family protein [Brucella ceti str.
Cudo]
gi|261296191|gb|EEX99687.1| dihydropyrimidine dehydrogenase [Brucella pinnipedialis B2/94]
gi|261304491|gb|EEY07988.1| dihydropyrimidine dehydrogenase [Brucella pinnipedialis M163/99/10]
gi|261737508|gb|EEY25504.1| dihydropyrimidine dehydrogenase [Brucella sp. F5/99]
gi|264660201|gb|EEZ30462.1| dihydropyrimidine dehydrogenase [Brucella pinnipedialis M292/94/1]
gi|340558386|gb|AEK53624.1| dihydropyrimidine dehydrogenase [Brucella pinnipedialis B2/94]
Length = 436
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K++K +PD+ LIASIM + A
Sbjct: 63 -----GAIHGADRRLLGLNNIELITDRPLEINLREMKEVKMRWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ + V W + +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVKWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PAR A +G++ VS INTI S++ +DL T+ P P ++G + GGY AV
Sbjct: 178 LTPNITDVRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGG+ T DAAEFI LG TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DAETAGLPISGIGGITTWRDAAEFIALGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M + +++DF+G ++ + T + L + + I Q ++ G
Sbjct: 294 KVVQEMIDGLSDWMDSKGYQTLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCG 351
>gi|17987922|ref|NP_540556.1| dihydropyrimidine dehydrogenase [Brucella melitensis bv. 1 str.
16M]
gi|260563371|ref|ZP_05833857.1| dihydropyrimidine dehydrogenase [Brucella melitensis bv. 1 str.
16M]
gi|265990421|ref|ZP_06102978.1| dihydropyrimidine dehydrogenase [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994249|ref|ZP_06106806.1| dihydropyrimidine dehydrogenase [Brucella melitensis bv. 3 str.
Ether]
gi|17983659|gb|AAL52820.1| dihydropyrimidine dehydrogenase (nadp+) [Brucella melitensis bv. 1
str. 16M]
gi|260153387|gb|EEW88479.1| dihydropyrimidine dehydrogenase [Brucella melitensis bv. 1 str.
16M]
gi|262765362|gb|EEZ11151.1| dihydropyrimidine dehydrogenase [Brucella melitensis bv. 3 str.
Ether]
gi|263001205|gb|EEZ13780.1| dihydropyrimidine dehydrogenase [Brucella melitensis bv. 1 str.
Rev.1]
Length = 436
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K++K +PD+ LIASIM + A
Sbjct: 63 -----GAIHGADRRLLGLNNIELITDRPLEINLREMKEVKMRWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ + V W + +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVKWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A +G++ +S INTI S++ +DL T+ P P ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAFANGTDALSLINTINSIVSVDLDTMSPVPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGG+ T DAAEFI LG TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DAETAGLPISGIGGITTWQDAAEFIALGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M + +++DF+G ++ + T + L + + I Q ++ G
Sbjct: 294 KVVQEMIDGLSDWMDSKGYQTLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCG 351
>gi|84514681|ref|ZP_01002045.1| dihydropyrimidine dehydrogenase [Loktanella vestfoldensis SKA53]
gi|84511732|gb|EAQ08185.1| dihydropyrimidine dehydrogenase [Loktanella vestfoldensis SKA53]
Length = 434
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAFD GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTTNFLGIKSPNPFWLASAPPTDKEYNVRRAFDAGWGGVVWKTLGSEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPL+T L E K++KA YPD+ +I SIM + A
Sbjct: 63 -----GAIYGADRRLLGLNNIELITDRPLQTNLDEIKRVKADYPDRAMIVSIMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W++++ RV+ETG D IE+NF CPHGM ER MGAAVGQ +E V W PV K
Sbjct: 118 WKDILPRVQETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWCKQYYDKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PA A+R G++ VS INTI S+ ++L T+ PEP ++G + GGY AV
Sbjct: 178 LTPNITDIRQPAAAAMRGGADAVSLINTINSITSVNLDTMSPEPSIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ + ++SGIGGV T DAAE+I LG VQVCT VM +G+
Sbjct: 238 KPIALSMVSEIARHPET----RGLAISGIGGVTTWRDAAEYISLGCGNVQVCTAVMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L +M ++S+E G +I T + L + + I Q ++ G
Sbjct: 294 KIVQEMISGLSGWMDEKGYTSVEQVVGRAIPNVTDWKYLNLNYVAKAKINQDDCIKCG 351
>gi|261751635|ref|ZP_05995344.1| dihydropyrimidine dehydrogenase [Brucella suis bv. 5 str. 513]
gi|261741388|gb|EEY29314.1| dihydropyrimidine dehydrogenase [Brucella suis bv. 5 str. 513]
Length = 436
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 215/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K++K +PD+ LIASIM + A
Sbjct: 63 -----GAIHGADRRLLGLNNIELITDRPLEINLREMKEVKMRWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ + VEETG D IE+NF CPHGM ER MGAAVGQ + V W + +PV K
Sbjct: 118 WKATLPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVKWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A +G++ VS INTI S++ +DL T+ P P ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGG+ T DAAEFI LG TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DAETAGLPISGIGGITTWRDAAEFIALGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M + +++DF+G ++ + T + L + + I Q ++ G
Sbjct: 294 KVVQEMIDGLSDWMDSKGYQTLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCG 351
>gi|239831126|ref|ZP_04679455.1| dihydroorotate dehydrogenase family protein [Ochrobactrum
intermedium LMG 3301]
gi|444309524|ref|ZP_21145161.1| dihydropyrimidine dehydrogenase subunit B [Ochrobactrum intermedium
M86]
gi|239823393|gb|EEQ94961.1| dihydroorotate dehydrogenase family protein [Ochrobactrum
intermedium LMG 3301]
gi|443487191|gb|ELT49956.1| dihydropyrimidine dehydrogenase subunit B [Ochrobactrum intermedium
M86]
Length = 436
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K++K +PD+ LIASIM + A
Sbjct: 63 -----GAIHGADRRLLGLNNIELITDRPLEVNLREMKEVKMRWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ + V W + +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVAMVVKWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A +G++ VS INTI S++ +DL ++ P P ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARGAHAAGTDAVSLINTINSIVSVDLDSMSPVPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + + +SGIGG+ T DAAEFI LG TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DPETRGLPISGIGGITTWRDAAEFIALGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M + S++DFRG ++ + + + L + + I Q ++ G
Sbjct: 294 KVVQEMIDGLSDWMDSKGYQSLDDFRGMAVGHVSDWQYLNLNYVTKARINQDLCIKCG 351
>gi|306842448|ref|ZP_07475099.1| dihydroorotate dehydrogenase family protein [Brucella sp. BO2]
gi|306287304|gb|EFM58784.1| dihydroorotate dehydrogenase family protein [Brucella sp. BO2]
Length = 436
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 215/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K++K +PD+ LIASIM + A
Sbjct: 63 -----GAIHGADRRLLGLNNIELITDRPLEINLREMKEVKMRWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ + V W + +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVKWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A +G++ VS INTI S++ +DL T+ P P ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPMPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGG+ T DAAEFI L TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DAETAGLPISGIGGITTWRDAAEFIALSCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M + +++DF+G ++ + T + L + + I Q ++ G
Sbjct: 294 KVVQEMIDGLSDWMDSKGYQTLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCG 351
>gi|384915903|ref|ZP_10016108.1| Dihydroorotate dehydrogenase fused to Fe-S-cluster domain
[Methylacidiphilum fumariolicum SolV]
gi|384526765|emb|CCG91979.1| Dihydroorotate dehydrogenase fused to Fe-S-cluster domain
[Methylacidiphilum fumariolicum SolV]
Length = 446
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 211/338 (62%), Gaps = 11/338 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+LSI G++ NPF + SGPP + + AF+ G+G V KT+ V NV+ RY+
Sbjct: 3 ELSIEFAGIRSINPFWLASGPPTNSAAQVNAAFEAGFGGAVWKTI---GTAVENVSSRYS 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ +I+G N+ELISDRPLE LKE +++K +PD+ +I SIMEEY++ W
Sbjct: 60 SYKKW------DRILGLNNLELISDRPLELNLKEIQEIKKRWPDRAVIVSIMEEYDRKKW 113
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL+ +VE +G D IE+NF CPHGMPER G+ +GQD L EV W+ +P+ K+
Sbjct: 114 EELVKKVEASGADGIELNFGCPHGMPERGTGSKIGQDPTLCREVTSWVKRGTRLPLIVKL 173
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+TDIT+ A+ A+ G+ +S INTI ++ G+DL+T P + G S+ GGYS +A+
Sbjct: 174 TPNVTDITQTAKAAMEGGASALSLINTIQAITGVDLETFEVLPSIGGKSSYGGYSGEAIK 233
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIALG +A M +K +S +GG+ T D+ EF+LLGA++VQ+C+ VM++G+
Sbjct: 234 PIALGLTAKVASM--EMVQEKQVPISAMGGISTWRDSVEFLLLGASSVQLCSAVMLNGFR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
++ L LK +M+ F SI DFRG S+ + +L
Sbjct: 292 IIDDLLSGLKHWMQAKGFRSIADFRGKSLSHIVPFRKL 329
>gi|351730366|ref|ZP_08948057.1| dihydropyrimidine dehydrogenase subunit B [Acidovorax radicis N35]
Length = 437
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 218/358 (60%), Gaps = 13/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+ G+Q PNPF + S PP + RAF+ GWG VV KT+ D A V+NV PRY
Sbjct: 3 DIRSNFLGIQSPNPFWLASAPPTDKEINVTRAFEAGWGGVVWKTLGEDPA-VVNVNGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ L S ++IG NIELI+DRPL T L+E K++K +PD+ +I S+M + +
Sbjct: 62 STLM-----SQDRRVIGLNNIELITDRPLHTNLEEIKRVKRNWPDRAMIVSLMVPCEEQS 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VE+TG D IE+NF CPHGM ER MGAAVGQ ++ V W + +PV K
Sbjct: 117 WKAILPLVEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIQMVTAWCKHYSKLPVIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PAR A G++ VS INTI S+MG+DL + P +G+ + GGY AV
Sbjct: 177 LTPNITDVRQPARAAKAGGADAVSLINTINSIMGVDLDRMVMSPSTDGWGSHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +SGIGG+ T DAAE+I LG TVQVCT M++G+
Sbjct: 237 KPIALNMVAEIARDAQT----AGLPISGIGGITTWRDAAEYIALGCGTVQVCTAAMVYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ +C+ L +FM H +++I+DF+G ++ + L +++ I Q ++ G
Sbjct: 293 KIVQDMCDGLSNFMDEHGYATIDDFKGQAVPTVKDWKNLNLNHIEKAVINQDACIQCG 350
>gi|375143822|ref|YP_005006263.1| dihydropyrimidine dehydrogenase (NADP+), dihydrouracil
dehydrogenase (NAD+), dihydroorotate oxidase B,
catalytic subunit [Niastella koreensis GR20-10]
gi|361057868|gb|AEV96859.1| dihydropyrimidine dehydrogenase (NADP+), dihydrouracil
dehydrogenase (NAD+), dihydroorotate oxidase B,
catalytic subunit [Niastella koreensis GR20-10]
Length = 422
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 156/351 (44%), Positives = 213/351 (60%), Gaps = 14/351 (3%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGAN 112
G++ PNPF + S PP + RAF+ GWG VV KT+ ++V NV+ RY+ + N
Sbjct: 10 GIKSPNPFWLASAPPTDKKINVLRAFEAGWGGVVWKTL---GSQVKNVSSRYSAVNY--N 64
Query: 113 GSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRV 172
GS +++G+ NIELISDRPLE L+E K+ L+PD+ +I S+M + + W ELI +V
Sbjct: 65 GS---KVMGFNNIELISDRPLELNLREIKECIKLFPDRAMIVSLMADNTREKWHELIAQV 121
Query: 173 EETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDI 232
E+TG +E+NF CPHGM ER MGA VGQD + V W+ KAT+PV K+TPN+ +
Sbjct: 122 EDTGAHGLELNFGCPHGMTERGMGAVVGQDPEIARLVVEWVMEKATIPVITKLTPNVHSV 181
Query: 233 TEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKV 292
+ ++ +GS +S INTI SV GIDL T P P V G S GGY AV PIAL +
Sbjct: 182 VPTGKASVEAGSNALSLINTIQSVTGIDLDTFVPNPYVAGKSVFGGYCGPAVKPIALKML 241
Query: 293 MSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352
+I++ + +SGIGGV T DA EF+LLGA TVQVCT M HG+ +V+ +CE
Sbjct: 242 ATISQ----DPVTSKVPISGIGGVSTWKDAVEFMLLGATTVQVCTAAMKHGFRIVEDMCE 297
Query: 353 ELKDFMKMHNFSSIEDFRGASIEYFTTHTEL-VRMQQEA-IQQRKAVRKGL 401
L ++M F++I DF G S+ + T EL + A I Q K + GL
Sbjct: 298 GLNNWMDEKGFNAINDFIGKSVPHLTQWEELDINYHIVANIDQNKCIHCGL 348
>gi|261213313|ref|ZP_05927594.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 3 str. Tulya]
gi|260914920|gb|EEX81781.1| dihydropyrimidine dehydrogenase [Brucella abortus bv. 3 str. Tulya]
Length = 436
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 215/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K++K +PD+ LIASIM + A
Sbjct: 63 -----GAIHGADRRLLGLNNIELITDRPLEINLREMKEVKMRWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ + V W + +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVKWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A +G++ VS INTI S++ +DL T+ P P ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGI G+ T DAAEFI LG TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DAETAGLPISGIVGITTWRDAAEFIALGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M + +++DF+G ++ + T + L + + I Q ++ G
Sbjct: 294 KVVQEMIDGLSDWMDSKGYQTLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCG 351
>gi|225851829|ref|YP_002732062.1| dihydropyrimidine dehydrogenase [Brucella melitensis ATCC 23457]
gi|256264655|ref|ZP_05467187.1| dihydropyrimidine dehydrogenase [Brucella melitensis bv. 2 str.
63/9]
gi|384210676|ref|YP_005599758.1| dihydroorotate dehydrogenase family protein [Brucella melitensis
M5-90]
gi|384407777|ref|YP_005596398.1| dihydropyrimidine dehydrogenase [Brucella melitensis M28]
gi|384444398|ref|YP_005603117.1| dihydropyrimidine dehydrogenase [Brucella melitensis NI]
gi|225640194|gb|ACO00108.1| dihydroorotate dehydrogenase family protein [Brucella melitensis
ATCC 23457]
gi|263095024|gb|EEZ18732.1| dihydropyrimidine dehydrogenase [Brucella melitensis bv. 2 str.
63/9]
gi|326408324|gb|ADZ65389.1| dihydropyrimidine dehydrogenase [Brucella melitensis M28]
gi|326538039|gb|ADZ86254.1| dihydroorotate dehydrogenase family protein [Brucella melitensis
M5-90]
gi|349742394|gb|AEQ07937.1| dihydropyrimidine dehydrogenase [Brucella melitensis NI]
Length = 436
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 215/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF WG VV KT+ + V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKASWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K++K +PD+ LIASIM + A
Sbjct: 63 -----GAIHGADRRLLGLNNIELITDRPLEINLREMKEVKMRWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ + V W + +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVKWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A +G++ +S INTI S++ +DL T+ P P ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAFANGTDALSLINTINSIVSVDLDTMSPVPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGG+ T DAAEFI LG TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DAETAGLPISGIGGITTWQDAAEFIALGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M + +++DF+G ++ + T + L + + I Q ++ G
Sbjct: 294 KVVQEMIDGLSDWMDSKGYQTLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCG 351
>gi|153007710|ref|YP_001368925.1| dihydropyrimidine dehydrogenase [Ochrobactrum anthropi ATCC 49188]
gi|404317240|ref|ZP_10965173.1| dihydropyrimidine dehydrogenase subunit B [Ochrobactrum anthropi
CTS-325]
gi|151559598|gb|ABS13096.1| dihydroorotate dehydrogenase family protein [Ochrobactrum anthropi
ATCC 49188]
Length = 436
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/360 (43%), Positives = 218/360 (60%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K++K +PD+ LIASIM + A
Sbjct: 63 -----GAIHGADRRLLGLNNIELITDRPLEVNLREMKEVKMRWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ + V W + +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYVGMVVKWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A +G++ VS INTI S++ +DL ++ P P ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARGAKENGTDAVSLINTINSIVSVDLDSMSPVPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEFI LG TVQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGITTWRDAAEFIALGCGTVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + + L D+M + +++DFRG ++ + + + L + + I Q ++ G
Sbjct: 292 GFKVVEEMIDGLSDWMDSKGYQTLDDFRGMAVGHVSDWQYLNLNYVTKARIDQDSCIKCG 351
>gi|365092487|ref|ZP_09329635.1| dihydropyrimidine dehydrogenase subunit B [Acidovorax sp. NO-1]
gi|363415611|gb|EHL22738.1| dihydropyrimidine dehydrogenase subunit B [Acidovorax sp. NO-1]
Length = 437
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 217/358 (60%), Gaps = 13/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+ G+Q PNPF + S PP + RAF+ GWG VV KT+ D V+NV PRY
Sbjct: 3 DIRSNFLGIQSPNPFWLASAPPTDKEINVTRAFEAGWGGVVWKTLGEDP-PVVNVNGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ L S ++IG NIELI+DRPL+T L+E K++K +PD+ +I S+M + +
Sbjct: 62 STLM-----SQDRRVIGLNNIELITDRPLDTNLEEIKRVKRAWPDRAMIVSLMVPCEEQS 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VE+TG D IE+NF CPHGM ER MGAAVGQ ++ V W + +PV K
Sbjct: 117 WKNILPLVEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIQMVTAWCKHYSKLPVIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ PAR A G++ VS INTI S+MG+DL + P +G+ + GGY AV
Sbjct: 177 LTPNITDVRHPARAAKAGGADAVSLINTINSIMGVDLDRMVMSPSTDGWGSHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +SGIGG+ T DAAE+I LG TVQVCT M++G+
Sbjct: 237 KPIALNMVAEIARDAQT----AGLPISGIGGITTWRDAAEYIALGCGTVQVCTAAMVYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ +C+ L +FM H +++++DF+G ++ + L +++ I Q ++ G
Sbjct: 293 KIVQDMCDGLSNFMDEHGYATLDDFKGQAVPTVKDWKNLNLNHIEKAVINQDACIQCG 350
>gi|344171667|emb|CCA84287.1| putative dihydroorotate dehydrogenase,FMN-linked, 4Fe-4S
ferredoxin-type protein [Ralstonia syzygii R24]
Length = 435
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 218/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G++ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGIKSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPLE L+E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLEVNLREIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MG+AVGQ +E V W+ A +P K+
Sbjct: 117 KWILPMVEDTGADAVELNFGCPHGMSERGMGSAVGQVPEYVERVTRWVKAGTRLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI +R A R G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNITDIRLGSRAAYRGGADGVSLINTINSIVAVDLDQMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ +SGIGG+ T DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDAQT----PGLPISGIGGISTWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVSDLADGLANWMDEKGYATLDDVRGKAVSNVTDWKYLNLEYDIKARIDQDRCIQCGL 350
>gi|148559324|ref|YP_001258321.1| dihydropyrimidine dehydrogenase [Brucella ovis ATCC 25840]
gi|148370581|gb|ABQ60560.1| dihydroorotate dehydrogenase family protein [Brucella ovis ATCC
25840]
Length = 436
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 215/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K++K +PD+ LIASIM + A
Sbjct: 63 -----GAIHGADRRLLGLNNIELITDRPLEINLREMKEVKMRWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM E MGAAVGQ + V W + +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSEHGMGAAVGQVPEYVGMVVKWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A +G++ VS INTI S++ +DL T+ P P ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAFANGTDAVSLINTINSIVSVDLDTMSPVPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +SGIG + T DAAEFI LG TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIARDAET----AGLPISGIGDITTWRDAAEFIALGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M + +++DF+G ++ + T + L + + I Q ++ G
Sbjct: 294 KVVQEMIDGLSDWMDSKGYQTLDDFQGCAVSHVTDWQYLNLNYVTKARINQDLCIQCG 351
>gi|390960118|ref|YP_006423875.1| dihydroorotate dehydrogenase family protein [Terriglobus roseus DSM
18391]
gi|390415036|gb|AFL90540.1| dihydroorotate dehydrogenase family protein [Terriglobus roseus DSM
18391]
Length = 468
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 206/354 (58%), Gaps = 14/354 (3%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
P L T G+ NPF + S PP + RAFD GWG V KT+ V NV+ RY
Sbjct: 2 PTLENTFCGIPCLNPFWLASAPPTNCGEQIMRAFDAGWGGAVWKTI---GEPVTNVSSRY 58
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ L +++G NIELISDRP T L+E ++K YP +LIAS+M E N+ +
Sbjct: 59 SSLDWEGR-----RMMGLNNIELISDRPTITNLREIAEVKRRYPKHVLIASLMVESNRES 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W +++ +VE+ G D +E+NF CPHGM ER MG+AVGQ E + W+ KA PV K
Sbjct: 114 WHDIVAKVEDAGADGLELNFGCPHGMSERGMGSAVGQVPEYAERITSWVKEKARTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNI+DI PAR A R G+ +SAINTI S+ GIDL TL P P V+G ST GGY AV
Sbjct: 174 LTPNISDIRMPARAAKRGGAHALSAINTINSITGIDLDTLEPRPKVDGSSTHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V I ++ LSGIGGV T DA EF+LLGA VQVCT VM +GY
Sbjct: 234 KPIALSMVQQIMSDAEAAL-----PLSGIGGVATWRDAVEFLLLGAGNVQVCTAVMHYGY 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVR 398
+V+ + + + +M F +I+DFRG S+ +L M + + Q A +
Sbjct: 289 RIVEDMADGMLQWMSEKGFETIDDFRGLSLPKMREWKQL-NMNYKVVAQIDASK 341
>gi|259417001|ref|ZP_05740921.1| dihydroorotate dehydrogenase family protein [Silicibacter sp.
TrichCH4B]
gi|259348440|gb|EEW60217.1| dihydroorotate dehydrogenase family protein [Silicibacter sp.
TrichCH4B]
Length = 434
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 211/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTTEFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPL+ L+E ++K YPD+ LIASIM +AA
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRPLDVNLEEMTRVKKDYPDRALIASIMVPCEEAA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ RV ETG D IE+NF CPHGM ER MG+AVGQ ++ V W PV K
Sbjct: 118 WKAILPRVAETGCDGIELNFGCPHGMAERGMGSAVGQVPEYIQMVTEWCKQYYDKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A ++ VS INTI S+ ++L + PEP + G T GGY AV
Sbjct: 178 LTPNITDIRHPARAAHAGNADAVSLINTINSITSVNLDAMSPEPMIGGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V IA+ ++ +S IGGV T DAAEFI LGA VQVCT M +G+
Sbjct: 238 KPIAMNMVAEIARDPQT----AGLPISAIGGVTTWRDAAEFIALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L D+M +SSIEDFRG ++ T + +L + + I Q ++ G
Sbjct: 294 KVVEEMISGLSDWMDQKGYSSIEDFRGMAVPNVTDWQYLDLNYVTKAKISQDDCIKCG 351
>gi|427429355|ref|ZP_18919390.1| Dihydropyrimidine dehydrogenase [Caenispirillum salinarum AK4]
gi|425880548|gb|EKV29244.1| Dihydropyrimidine dehydrogenase [Caenispirillum salinarum AK4]
Length = 426
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/359 (42%), Positives = 215/359 (59%), Gaps = 14/359 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS T+ G++ PNPF + S PP ++RAF GWG VV KT+ +D V+NV+ RY
Sbjct: 3 DLSCTIAGIKSPNPFWLASAPPTDKQYNVERAFRAGWGGVVWKTLGIDP-PVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ NG+ ++ G NIELI+DRPL L E +K +PD+ +I S+M N+ W
Sbjct: 62 AIDY--NGT---RMAGLNNIELITDRPLAVNLAEIADVKKKWPDRAVIVSLMVPCNEEDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VEETG D +E+NF CPHGM ER MGAAVGQ ++ V GW+ +++P K+
Sbjct: 117 KYILPLVEETGADGVELNFGCPHGMSERGMGAAVGQVPEYVQMVTGWVKKYSSLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITD+ PAR A G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNITDVRHPARAAKNGGADGVSLINTINSIVSVDLDVMAPTPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ + +SGIGG+ T DAAE+I LG +VQVCT M HG+
Sbjct: 237 PIALNMVAEIARDPATH----GLPMSGIGGISTWRDAAEYIALGCGSVQVCTAAMHHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEA---IQQRKAVRKGL 401
+V+ + + L ++M + +IEDFRG ++ T +L M + I K ++ GL
Sbjct: 293 IVEDMIDGLSNWMDAKGYRTIEDFRGMAVGNVTDWNQL-NMNYDIKARIDDDKCIKCGL 350
>gi|294678050|ref|YP_003578665.1| dihydropyrimidine dehydrogenase [Rhodobacter capsulatus SB 1003]
gi|294476870|gb|ADE86258.1| dihydropyrimidine dehydrogenase (NADP(+)) [Rhodobacter capsulatus
SB 1003]
Length = 433
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 213/358 (59%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
+L+ T G++ PNPF + S PP ++RAF+ GWG VV KT+ LD V+NV+ PRY
Sbjct: 3 NLTSTFLGIKSPNPFWLASAPPTDKEVNVRRAFEAGWGGVVWKTLGLDGPPVVNVSGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA G ++G NIELI+DRPLE L+E K +K YPD+ L+ S+M ++ +
Sbjct: 63 -----GAIHGPDGTLLGLNNIELITDRPLEVNLREIKSVKRDYPDRALVVSLMVPCDEDS 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ RVEET D +E+NF CPHGM ER MGAAVGQ +E V W+ + +P K
Sbjct: 118 WKSILARVEETEADGVELNFGCPHGMAERGMGAAVGQVPDYVEMVTRWVKQHSRMPCIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNI+DI +PA A R G++ VS INTI S+ +DL P+P ++G+ T GGY AV
Sbjct: 178 LTPNISDIRKPAEAAKRGGADAVSLINTINSITSVDLDLFAPQPTIDGFGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + + +SGIGGV T DAAEF+ LGA+ VQVCT VM +G+
Sbjct: 238 KPIALNMVAEIARNPAT----RGLPISGIGGVTTWRDAAEFMALGAHNVQVCTAVMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L D+M + + G ++ T + L + +I Q ++ G
Sbjct: 294 KIVEEMISGLSDYMDRKGLTETREIVGRAVPKVTDWQYLNLNYTTKASIAQDDCIKCG 351
>gi|242237505|ref|YP_002985686.1| dihydropyrimidine dehydrogenase [Dickeya dadantii Ech703]
gi|242129562|gb|ACS83864.1| dihydroorotate dehydrogenase family protein [Dickeya dadantii
Ech703]
Length = 437
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 211/358 (58%), Gaps = 13/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ PRY
Sbjct: 3 DLSTEFLGIKSPNPFWLASAPPTDKEYNVVRAFEAGWGGVVWKTLGLDP-HVVNVSGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ L A +++G NIELI+DRPL L+E ++K +PD+ +I SIM + A
Sbjct: 62 STLLG-----ADRRVLGLNNIELITDRPLHVNLEEIARVKRNWPDRAMIVSIMVPCEEEA 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ +E V W ++PV K
Sbjct: 117 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYIERVTRWCKQYCSLPVIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A R G++ VS INTI SVMG+DL + P G + GGY AV
Sbjct: 177 LTPNITDIRYPARAAKRGGADAVSLINTINSVMGVDLDQMLMTPHTGGKGSHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + + +SGIGG+ T DAAEFI LG TVQVCT VM+ G+
Sbjct: 237 KPIALNMVSEIAR----DPDTFGLPISGIGGISTWRDAAEFIALGCGTVQVCTAVMVQGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTT--HTELVRMQQEAIQQRKAVRKG 400
+V+ + L +FM + SIE FRG ++ T + L + + I Q ++ G
Sbjct: 293 PIVRDMISGLSNFMDERGYRSIEAFRGRAVSSVTDWRYLNLNHIDKAVIDQSLCIKCG 350
>gi|442770407|gb|AGC71123.1| dihydropyrimidine dehydrogenase [NADP+] [uncultured bacterium
A1Q1_fos_18]
Length = 428
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 147/338 (43%), Positives = 204/338 (60%), Gaps = 15/338 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ G++ PNPF + S PP + RAFD GWG V KT+ ++NV+ RY+
Sbjct: 3 DLSVDFCGIKSPNPFWLASAPPTNTGDQIMRAFDAGWGGAVWKTL---GQPIVNVSSRYS 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ A +++G NIELI+DRPL+ L+E ++K YP LI S+M E + W
Sbjct: 60 SV-----DFAGRRMMGLNNIELITDRPLDVNLREISEVKKRYPKNALIVSLMVESKRETW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+++ R E+ G D +E+NF CPHGM ER MG+AVGQ ++ W+ A PV K+
Sbjct: 115 HDIVRRAEDAGADGLELNFGCPHGMSERGMGSAVGQVPDYTCQIVEWVKEVAKTPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITD+T PAR A + G++ VS INTI SV GIDL+TL P P V G S GGY AV
Sbjct: 175 TPNITDVTFPARAAEKGGADAVSLINTINSVTGIDLETLTPRPSVHGASAHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V S+A+ +K +SGIGG+ + DA EFILLG++TVQVCT VM HG+
Sbjct: 235 PIALSMVASVAQTVK-------IPISGIGGIASWQDAVEFILLGSSTVQVCTAVMHHGFR 287
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V + + L ++ FSS+++ G S+ + +L
Sbjct: 288 IVLDMIDGLSAYLDRKGFSSVQELVGLSVPRYQRWEQL 325
>gi|255264310|ref|ZP_05343652.1| dihydroorotate dehydrogenase family protein [Thalassiobium sp.
R2A62]
gi|255106645|gb|EET49319.1| dihydroorotate dehydrogenase family protein [Thalassiobium sp.
R2A62]
Length = 434
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 213/358 (59%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G+ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTTNFLGISSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E K++KA YPD+ LI SIM + A
Sbjct: 63 -----GAIYGADRRLLGLNNIELITDRDLYTNLEEIKRVKADYPDRALIVSIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VE+TG D IE+NF CPHGM ER MGAAVGQ +E V W + PV K
Sbjct: 118 WKAILPLVEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWCKQYYSKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PA A R G++ VS INTI S+ ++L ++ PEP ++G T GGY AV
Sbjct: 178 LTPNITDVRKPAAAAKRGGADAVSLINTINSITSVNLDSMSPEPSIDGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V IA+ +++ + +SGIGGV T DAAEFI LG VQVCT M +G+
Sbjct: 238 KPIAMSMVSEIARNSETQ----GFPISGIGGVTTWRDAAEFITLGCGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L D+M +SI+DF GA++ T + L + + I Q + G
Sbjct: 294 KIVQEMISGLSDWMDSKGHTSIDDFLGAAVPNTTDWQYLNLNYVAKAKIDQDACISCG 351
>gi|413964931|ref|ZP_11404157.1| dihydropyrimidine dehydrogenase subunit B [Burkholderia sp. SJ98]
gi|413927605|gb|EKS66894.1| dihydropyrimidine dehydrogenase subunit B [Burkholderia sp. SJ98]
Length = 428
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 219/358 (61%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL+ + G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLTCNIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E +Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREIEQVKRDWPDRALIVSLMVPCNEKDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ +VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILTQVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAFKGGADGVSLINTINSIVAVDLDQMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ + DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDPQT----PNLPISGIGGISSWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T H L + I Q K ++ GL
Sbjct: 293 IVSDLADGLSNWMDEKGYATLDDIRGRAVPNVTDWKHLNLKYDIKARIDQDKCIQCGL 350
>gi|300691785|ref|YP_003752780.1| dihydroorotate dehydrogenase, FMN-linked, 4Fe-4S ferredoxin-type
protein [Ralstonia solanacearum PSI07]
gi|299078845|emb|CBJ51506.1| putative dihydroorotate dehydrogenase, FMN-linked, 4Fe-4S
ferredoxin-type protein [Ralstonia solanacearum PSI07]
gi|344166975|emb|CCA79165.1| putative dihydroorotate dehydrogenase,FMN-linked, 4Fe-4S
ferredoxin-type protein [blood disease bacterium R229]
Length = 435
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 218/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G++ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGIKSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPLE L+E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLEVNLREIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MG+AVGQ +E V W+ A +P K+
Sbjct: 117 KWILPMVEDTGADAVELNFGCPHGMSERGMGSAVGQVPEYVEMVTRWVKAGTRLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNITDIRLGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ +SGIGG+ T DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDAQT----PGLPISGIGGISTWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVSDLADGLANWMDEKGYATLDDVRGKAVSNVTDWKYLNLKYDIKARIDQDRCIQCGL 350
>gi|312602354|ref|YP_004022199.1| dihydropyrimidine dehydrogenase [NADP+] subunit beta [Burkholderia
rhizoxinica HKI 454]
gi|312169668|emb|CBW76680.1| Dihydropyrimidine dehydrogenase [NADP+] beta subunit (EC 1.3.1.2)
[Burkholderia rhizoxinica HKI 454]
Length = 425
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 215/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG V KT+ LD VINV+ RY
Sbjct: 3 DLRCTIAGIASPNPFWLASAPPTDKAYNVNRAFEAGWGGAVWKTLGLDP-HVINVSSRY- 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
GA +I G NIELI+DRPL+ L+E Q+K +PD+ LI S+M N+ AW
Sbjct: 61 ----GATTYNGQRIAGLNNIELITDRPLDVNLREIAQIKHDWPDRALIVSMMVPCNEQAW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ +VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ + +P K+
Sbjct: 117 KSILPQVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKQASRLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI +R A G++GVS INTI S++ +DL+ + P P V+G T GGY AV
Sbjct: 177 TPNITDIRLGSRAAYAGGADGVSLINTINSIVAVDLEQMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ + N +SG+GG+ DAAEFI+LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIAR----DPNTPGLPISGMGGISNWRDAAEFIVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V + + L ++M F+++++ RG ++ T + L + I Q K ++ GL
Sbjct: 293 IVTDMIDGLSNWMDEKGFATLDEVRGRAVPNVTDWKYLNLQYDIKARIDQSKCIQCGL 350
>gi|407937547|ref|YP_006853188.1| dihydropyrimidine dehydrogenase subunit B [Acidovorax sp. KKS102]
gi|407895341|gb|AFU44550.1| dihydropyrimidine dehydrogenase subunit B [Acidovorax sp. KKS102]
Length = 437
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 216/358 (60%), Gaps = 13/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+ G+Q PNPF + S PP + RAF+ GWG VV KT+ D V+NV PRY
Sbjct: 3 DIRSNFLGIQSPNPFWLASAPPTDKEINVTRAFEAGWGGVVWKTLGEDP-PVVNVNGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ L S ++IG NIELI+DRPL T L+E K++K +PD+ +I S+M + +
Sbjct: 62 STLM-----SQDRRVIGLNNIELITDRPLHTNLEEIKRVKRNWPDRAMIVSLMVPCVEES 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VE+TG D IE+NF CPHGM ER MGAAVGQ ++ V W + +PV K
Sbjct: 117 WKNILPLVEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIQMVTAWCKHYSKLPVIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ PAR A G++ VS INTI S+MG+DL + P +G+ + GGY AV
Sbjct: 177 LTPNITDVRHPARAAKAGGADAVSLINTINSIMGVDLDRMVMSPSTDGWGSHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +SGIGG+ T DAAE+I LG TVQVCT M++G+
Sbjct: 237 KPIALNMVAEIARDAQT----AGLPISGIGGITTWRDAAEYIALGCGTVQVCTAAMVYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ +C+ L +FM H +++++DF+G ++ + L +++ I Q ++ G
Sbjct: 293 KIVQDMCDGLSNFMDEHGYATLDDFKGQAVPTVKDWKNLNLNHIEKAVINQDACIQCG 350
>gi|384136675|ref|YP_005519389.1| dihydroorotate dehydrogenase family protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339290760|gb|AEJ44870.1| dihydroorotate dehydrogenase family protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
Length = 386
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 148/338 (43%), Positives = 206/338 (60%), Gaps = 12/338 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL++ + G++ PNPF + S PP ++RAF+ GWG V KT L V NV+ R+
Sbjct: 3 DLTVEMAGIRSPNPFWLASAPPTNTGFQVERAFEAGWGGAVWKT--LTDRPVRNVSSRF- 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
GA +++G+ NIELISDRP E L E +Q+K +PD+ ++AS+M E +K W
Sbjct: 60 ----GALHLEDKRMVGFNNIELISDRPFEDNLAEIRQVKRRFPDRAVVASLMIEPDKKQW 115
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+E + +VE+ G+D IE+NF CPHGM ER MGAAVGQ L+E W+ + ATVPV AK+
Sbjct: 116 QEAVRKVEDVGVDGIELNFGCPHGMVERGMGAAVGQHPDLIERQTAWVKSAATVPVIAKL 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+TDI AR A+ G++ +S INT+ S++G+DLK+ P P V G T GGY AV
Sbjct: 176 TPNVTDIRASARAAVAGGADAISLINTVNSIIGVDLKSWVPRPTVAGLGTHGGYCGPAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V AK + +SGIGG+ T DA EF+LLGA+ VQVCT VM HG+
Sbjct: 236 PIALYMVAECAKD-----DAVCVPISGIGGISTWQDAVEFLLLGASAVQVCTAVMQHGFR 290
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ L + L F+ + + D G ++ + L
Sbjct: 291 IVEDLVDGLNRFLDENGIGGVRDIVGKALPNYVPFGSL 328
>gi|330820854|ref|YP_004349716.1| dihydroorotate dehydrogenase family protein [Burkholderia gladioli
BSR3]
gi|327372849|gb|AEA64204.1| dihydroorotate dehydrogenase family protein [Burkholderia gladioli
BSR3]
Length = 439
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL + G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCNIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPLE L+E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLEVNLREIAQVKRDWPDRALIVSLMVPCNEQDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ R+E+TG DA+E+NF CPHGM ER MGAAVGQ +E + W+ +P K+
Sbjct: 117 KGILPRIEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMITRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAWKGGADGVSLINTINSIVAVDLDQMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ T DAAEFI+LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDPQT----PNLPISGIGGISTWRDAAEFIVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M ++++ED RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVSDLADGLSNWMDEKGYATLEDVRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGL 350
>gi|256422463|ref|YP_003123116.1| dihydropyrimidine dehydrogenase [Chitinophaga pinensis DSM 2588]
gi|256037371|gb|ACU60915.1| dihydroorotate dehydrogenase family protein [Chitinophaga pinensis
DSM 2588]
Length = 422
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/361 (43%), Positives = 218/361 (60%), Gaps = 20/361 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S G++ PNP+ + S PP + RAF+ GWG VV KT+ ++V NV+ RY+
Sbjct: 3 DISANFLGIRSPNPYWLASAPPTDKKINVLRAFEAGWGGVVWKTL---GSQVKNVSSRYS 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ NGS +++G+ NIELISDRPL+ LKE + L+PD+ +I S+M + N+ +W
Sbjct: 60 SVDY--NGS---RVMGFNNIELISDRPLDINLKEIAECVRLFPDRAMIVSLMADNNRESW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
ELI +VE+TG +E+NF CPHGM ER MGAAVGQD + V W+ A++PV K+
Sbjct: 115 HELIKKVEDTGAHGLELNFGCPHGMTERGMGAAVGQDPEIAGRVVAWVMEVASIPVITKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+ + R ++ +G +S INTI SV G++L T P P V G ST GGY AV
Sbjct: 175 TPNVHSVVPTGRASVLAGCHALSLINTIQSVTGVNLDTFVPNPNVGGQSTFGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYS---LSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL KM+ + D S +SGIGG+ T DAAEF+LLGA TVQVCT M +
Sbjct: 235 PIAL-------KMLTTISQDPVTSRVPISGIGGISTWKDAAEFMLLGATTVQVCTAAMRY 287
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL-VRMQQEA-IQQRKAVRKG 400
G+ +++ LC+ L ++M F +I+DF G S+ T+ EL + A I Q K + G
Sbjct: 288 GFRIIEDLCDGLNNWMDEKGFRTIDDFIGRSVPTLTSWEELDINYHIVANINQEKCIHCG 347
Query: 401 L 401
L
Sbjct: 348 L 348
>gi|99081341|ref|YP_613495.1| dihydropyrimidine dehydrogenase [Ruegeria sp. TM1040]
gi|99037621|gb|ABF64233.1| dihydropyrimidine dehydrogenase (NADP+) / dihydrouracil
dehydrogenase (NAD+) / dihydroorotate oxidase B,
catalytic subunit [Ruegeria sp. TM1040]
Length = 434
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 211/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTTEFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPL+ L+E ++K YPD+ LIASIM +AA
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRPLDVNLEEMTRVKKDYPDRALIASIMVPCEEAA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ RV ETG D IE+NF CPHGM ER MG+AVGQ ++ V W PV K
Sbjct: 118 WKAILPRVAETGCDGIELNFGCPHGMAERGMGSAVGQVPEYIQMVTEWCKQYYDKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A ++ VS INTI S+ ++L + PEP + G T GGY AV
Sbjct: 178 LTPNITDIRHPARAAKAGNADAVSLINTINSITSVNLDAMSPEPMIGGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V I++ ++ +S IGGV T DAAEFI LGA VQVCT M +G+
Sbjct: 238 KPIAMNMVAEISRDPQT----AGLPISAIGGVTTWRDAAEFIALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L D+M +SSIEDFRG ++ T + +L + + I Q ++ G
Sbjct: 294 KVVEEMISGLSDWMDEKGYSSIEDFRGMAVPNVTDWQYLDLNYVTKAKISQDDCIKCG 351
>gi|322433905|ref|YP_004216117.1| dihydroorotate dehydrogenase [Granulicella tundricola MP5ACTX9]
gi|321161632|gb|ADW67337.1| dihydroorotate dehydrogenase family protein [Granulicella
tundricola MP5ACTX9]
Length = 489
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/332 (44%), Positives = 200/332 (60%), Gaps = 17/332 (5%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
P L G++ NPF + S PP + RAFD GWG V KT+ + NV+ RY
Sbjct: 2 PTLECNFAGIKCLNPFWLASAPPTNCGEQIMRAFDAGWGGAVWKTI---GEPITNVSSRY 58
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ + A +++G+ NIELISDRP+ T L+E ++K YP ++IAS+M E +
Sbjct: 59 SSIDW-----AGQRMMGFNNIELISDRPIATNLREISEVKRRYPKHVVIASLMVESKREV 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W +++ + E+ G D +E+NF CPHGM ER MG+AVGQ E++ W+ +A PV K
Sbjct: 114 WHDMVAQAEDAGADGLELNFGCPHGMSERGMGSAVGQVPEYAEQITYWVKERARTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNI+DI PAR A R G++ +SAINTI S+ GIDL T P P V+G S+ GGY AV
Sbjct: 174 LTPNISDIRMPARAAKRGGADALSAINTINSITGIDLDTFEPRPMVDGKSSHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKD--YSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V I DKD LSGIGG+ T DAAEFILLG VQVCT M +
Sbjct: 234 KPIALNMVQQI-------MADKDAMLPLSGIGGIGTWKDAAEFILLGCGNVQVCTAAMHY 286
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASI 374
GY +V+ + + L ++M F +IEDFRG S+
Sbjct: 287 GYRIVEDMADGLLEWMAAKGFETIEDFRGLSL 318
>gi|354595573|ref|ZP_09013590.1| dihydroorotate dehydrogenase family protein [Brenneria sp. EniD312]
gi|353673508|gb|EHD19541.1| dihydroorotate dehydrogenase family protein [Brenneria sp. EniD312]
Length = 437
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 214/358 (59%), Gaps = 13/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+S G++ PNPF + S PP + RAF+ GWG VV KT+ D V+NV PRY
Sbjct: 3 DISSNFLGIKSPNPFWLASAPPTDKEYNVVRAFEAGWGGVVWKTLGQDP-HVVNVNGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ LR +A +IIG NIELI+DR L+T L+E ++K +PD+ +I SIM + A
Sbjct: 62 STLR-----TADRRIIGLNNIELITDRSLDTNLEEIARVKRNWPDRAMIVSIMVPCEEEA 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VE+TG D IE+NF CPHGM ER MGAAVGQ + V W + +P K
Sbjct: 117 WKSILPLVEQTGADGIELNFGCPHGMSERGMGAAVGQVPEYIAMVTRWCKQYSRLPTIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNI DI +PAR AL+ G++ VS INTI SVMG+DL+ + P G + GGY AV
Sbjct: 177 LTPNIADIRQPARAALQGGADAVSLINTINSVMGVDLERMTIHPNTGGKGSHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + + +SGIGG+ T DAAEFI LG TVQVCT VM+HG+
Sbjct: 237 KPIALNMVAEIAR----DEPTRALPMSGIGGIATWRDAAEFIALGCGTVQVCTAVMVHGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTT--HTELVRMQQEAIQQRKAVRKG 400
+V+ + L +FM + ++EDFRG ++ + + L + + I Q ++ G
Sbjct: 293 QIVRDMVSGLSNFMDEQGYRTLEDFRGRAVGSVSDWRYLNLNHIDKAVIDQSACIKCG 350
>gi|339627610|ref|YP_004719253.1| dihydropyrimidine dehydrogenase [Sulfobacillus acidophilus TPY]
gi|379008022|ref|YP_005257473.1| dihydroorotate dehydrogenase family protein [Sulfobacillus
acidophilus DSM 10332]
gi|339285399|gb|AEJ39510.1| dihydropyrimidine dehydrogenase [Sulfobacillus acidophilus TPY]
gi|361054284|gb|AEW05801.1| dihydroorotate dehydrogenase family protein [Sulfobacillus
acidophilus DSM 10332]
Length = 415
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/330 (44%), Positives = 201/330 (60%), Gaps = 17/330 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ G++ PNPF + SGP +++AFDEGWG V KTV VINV+ R A
Sbjct: 3 DLSVNFAGIRAPNPFWLASGPLTNTAYQVEKAFDEGWGGAVWKTV---GEPVINVSSRLA 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ G +++G NIELISDRP+E L+E +K YP +I S+M E N W
Sbjct: 60 SIDYGGR-----RMMGLNNIELISDRPIEDNLREIAAVKRHYPQHAVIVSMMFESNPDVW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+++ RVE+TG D IE+NF CPHGM ER MG+ VGQ E++ ++ A + +PV K+
Sbjct: 115 RDMVKRVEDTGADGIELNFGCPHGMSERGMGSVVGQVPEYTEQITRYVTAVSQIPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+TD+ PAR A++ G++ VS INTI SVMG+DL T P P V+G + GGY AV
Sbjct: 175 TPNVTDVRYPARAAVKGGAQAVSLINTINSVMGVDLDTWMPRPQVDGRGSHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFND--KDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
PIAL M+ S +ND +SGIGG+ET DAAEF+LLGA TVQVCT M +G
Sbjct: 235 PIAL-------HMVASVYNDLGVPVPVSGIGGIETWQDAAEFMLLGAGTVQVCTAAMHYG 287
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ + E L ++ H + D G +
Sbjct: 288 FRIIREMTEGLSAYLDQHGLQKVGDLVGQA 317
>gi|126727112|ref|ZP_01742949.1| dihydropyrimidine dehydrogenase [Rhodobacterales bacterium
HTCC2150]
gi|126703540|gb|EBA02636.1| dihydropyrimidine dehydrogenase [Rhodobacterales bacterium
HTCC2150]
Length = 434
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 209/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ D V+NV PRY
Sbjct: 3 DLTTDFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSDGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ A +++G NIELI+DRPL+ L E ++K YPD+ LI S+M + A
Sbjct: 63 GVIHG-----ADRRVLGLNNIELITDRPLDVNLAEITRVKKDYPDRALIVSLMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+E++ +VE TG D IE+NF CPHGM ER MGAAVGQ +E V W + PV K
Sbjct: 118 WKEVLPKVEATGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWCKKYYSKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PA A R G++ VS INTI S++ +DL + PEP ++G T GGY AV
Sbjct: 178 LTPNITDIRAPAEAAKRGGADAVSLINTINSIVSVDLDAMCPEPSIDGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V IA+ + + +SGIGGV T DAAE+I LG VQVCT M +G+
Sbjct: 238 KPIAMSMVSEIARAPAT----AGFPISGIGGVTTWRDAAEYITLGCGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L +M +SI+DF GA++ T + L + + +I Q + G
Sbjct: 294 KVVQEMISGLSQWMDEKGHTSIQDFMGAAVPNTTDWQYLNLNYVAKASINQNDCISCG 351
>gi|126731572|ref|ZP_01747378.1| dihydropyrimidine dehydrogenase [Sagittula stellata E-37]
gi|126708108|gb|EBA07168.1| dihydropyrimidine dehydrogenase [Sagittula stellata E-37]
Length = 434
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 210/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G+ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTTDFVGITSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLET L+E ++KA YPD+ LIASIM +AA
Sbjct: 63 -----GAIHGADRRLLGLNNIELITDRPLETNLEEMARVKADYPDRALIASIMVPCEEAA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ RV ETG D IE+NF CPHGM ER MGAAVGQ +E V W PV K
Sbjct: 118 WKAILPRVAETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWCKMYYDKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PA A G++ VS INTI S+ +DL + PEP ++G + GGY AV
Sbjct: 178 LTPNITDIRKPAAAARNGGADAVSLINTINSITSVDLDSFAPEPTIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +SGIGGV T DAAEF++LG VQVCT M +G+
Sbjct: 238 KPIALSMVSEIARDPQTH----GLPISGIGGVTTWRDAAEFMVLGCGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L +M ++S DF G ++ T + L + + I Q ++ G
Sbjct: 294 KVVEEMKRGLSQWMDEKGYTSTADFVGKAVPNVTDWQYLNLNYITKARIDQDACIKCG 351
>gi|209515499|ref|ZP_03264364.1| dihydroorotate dehydrogenase family protein [Burkholderia sp. H160]
gi|209503966|gb|EEA03957.1| dihydroorotate dehydrogenase family protein [Burkholderia sp. H160]
Length = 426
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 214/358 (59%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+Q PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGIQSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRY- 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
GA +I G NIELI+DRPL+ LKE Q+K +PD+ LI S+M + W
Sbjct: 61 ----GATTWRGQRIAGLNNIELITDRPLDVNLKEIAQVKRDWPDRALIVSLMVPCTEHDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ +VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPQVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWVKEGTRLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+TDI AR A++ G++GVS INTI S++G+DL + P P V+G T GGY A
Sbjct: 177 TPNVTDIRHGARAAMKGGADGVSLINTINSIVGVDLDVMAPLPTVDGKGTHGGYCGPAAK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ +SGIGG+ DAAEFI+LGA +VQVCT M +G+
Sbjct: 237 PIALHMVAEIARDPQTH----GLPISGIGGISDWRDAAEFIVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V + + L ++M ++S++ RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVSDMIDGLSNWMDDKGYASLDAIRGRAVPNVTDWQYLNLNYDIKARIDQERCIQCGL 350
>gi|187924666|ref|YP_001896308.1| dihydropyrimidine dehydrogenase [Burkholderia phytofirmans PsJN]
gi|187715860|gb|ACD17084.1| dihydroorotate dehydrogenase family protein [Burkholderia
phytofirmans PsJN]
Length = 444
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 219/358 (61%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG ++ G NIELI+DRPL+ LKE Q+K +PD+ +I S+M N+ W
Sbjct: 62 AVQW--NGQ---RMAGLNNIELITDRPLDVNLKEITQVKRDWPDRAMIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTRLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRTGSRAAYKGGADGVSLINTINSIVAVDLDAMSPLPMVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ + +SGIGG+ T DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDVET----PNLPISGIGGITTWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG +++ T + L + I Q K ++ GL
Sbjct: 293 IVSDLTDGLSNWMDEKGYATLDDIRGRAVQNVTDWKYLNLKYDIKARIDQDKCIQCGL 350
>gi|395007457|ref|ZP_10391197.1| dihydroorotate dehydrogenase family protein [Acidovorax sp. CF316]
gi|394314535|gb|EJE51432.1| dihydroorotate dehydrogenase family protein [Acidovorax sp. CF316]
Length = 437
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 212/358 (59%), Gaps = 13/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+ G+ PNPF + S PP + RAF+ GWG VV KT+ D + V+NV PRY
Sbjct: 3 DIRSNFLGISSPNPFWLASAPPTDKEINVTRAFEAGWGGVVWKTLGEDPS-VVNVNGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ L S +IG NIELI+DRPL T L+E K++K +PD+ +I S+M + +
Sbjct: 62 STLM-----SQDRHVIGLNNIELITDRPLHTNLEEIKRVKRNWPDRAMIVSLMVPCEEQS 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VE+TG D IE+NF CPHGM ER MGAAVGQ ++ V W + +PV K
Sbjct: 117 WKSILPLVEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIQMVTAWCKHYSRLPVIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ PAR A G++ VS INTI S+MG+DL + P +G+ + GGY AV
Sbjct: 177 LTPNITDVRHPARAAKAGGADAVSLINTINSIMGVDLDRMTMSPSTDGWGSHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +SGIGG+ T DAAE+I LG TVQVCT M++G+
Sbjct: 237 KPIALNMVAEIARDAQT----AGLPISGIGGITTWRDAAEYIALGCGTVQVCTAAMVYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ +C+ L +FM H + +I DF+G ++ + L + + I Q ++ G
Sbjct: 293 KIVQDMCDGLSNFMDEHGYETIADFQGQAVPTVKDWKNLNLNHIDKAVINQDACIQCG 350
>gi|295681146|ref|YP_003609720.1| dihydroorotate dehydrogenase [Burkholderia sp. CCGE1002]
gi|295441041|gb|ADG20209.1| dihydroorotate dehydrogenase family protein [Burkholderia sp.
CCGE1002]
Length = 426
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 214/358 (59%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+Q PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGIQSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRY- 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
GA +I G NIELI+DRPL+ L+E Q+K +PD+ LI S+M N+ W
Sbjct: 61 ----GATTWRGQRIAGLNNIELITDRPLDVNLQEIAQVKRDWPDRALIVSLMVPCNEHDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ +VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPQVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWVKEGTRLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+TDI AR A+ G++GVS INTI S++G+DL + P P V+G T GGY A
Sbjct: 177 TPNVTDIRHGARAAMNGGADGVSLINTINSIVGVDLDLMAPLPTVDGKGTHGGYCGPAAK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ +SGIGG+ DAAEFI+LGA +VQVCT M +G+
Sbjct: 237 PIALHMVAEIARDPQTH----GLPISGIGGISDWRDAAEFIVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V + + L ++M ++S++ RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVSDMIDGLSNWMDDKGYASLDAIRGRAVPNVTDWQYLNLNYDIKARIDQDRCIQCGL 350
>gi|421473945|ref|ZP_15922012.1| dihydropyrimidine dehydrogenase [Burkholderia multivorans CF2]
gi|400233183|gb|EJO62756.1| dihydropyrimidine dehydrogenase [Burkholderia multivorans CF2]
Length = 435
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPIPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ T DAAEFI+LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDPET----PNLPISGIGGISTWRDAAEFIVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q + +R GL
Sbjct: 293 IVSDLIDGLSNWMDDKGYATLDDVRGRAVPNVTDWKYLNLQYDIKARIDQDRCIRCGL 350
>gi|162454677|ref|YP_001617044.1| dihydropyrimidine dehydrogenase [Sorangium cellulosum So ce56]
gi|161165259|emb|CAN96564.1| Dihydropyrimidine dehydrogenase [Sorangium cellulosum So ce56]
Length = 462
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/338 (44%), Positives = 204/338 (60%), Gaps = 13/338 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP ++RAFD GWG V KT+ ++NV+ R+
Sbjct: 3 DLSIDFAGIKSPNPFWLASAPPTNTGDQVRRAFDAGWGGAVWKTL---GNPIVNVSSRFG 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ G +++G N+ELI+DRPL+ LKE +++K YP LIAS+M E K W
Sbjct: 60 GIDYGNT-----RLMGLNNVELITDRPLDVNLKEMREIKRRYPGHALIASLMVE-TKDEW 113
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+I + E+TG D +E+NF CPHGM ER MG+AVG + +L+E+ W AT PV K+
Sbjct: 114 REIIRKAEDTGADGLELNFGCPHGMCERGMGSAVGNEPAVLQEIARWAVEFATTPVIVKL 173
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+ DI EP LRSG+ GVS INT+ S+MG+DL+ + P P V G ST GGY AV
Sbjct: 174 TPNVGDILEPGEAVLRSGAHGVSLINTVKSLMGVDLERMVPLPRVGGASTNGGYCGPAVK 233
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +A+ +SGIGG+ DAAEFI LGA +VQVCT VM +GY
Sbjct: 234 PIALHLLSQLAR----HPGVGRLPISGIGGISNSRDAAEFIALGATSVQVCTAVMHYGYR 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + E L D++ H S+ + RG +I EL
Sbjct: 290 IVEEMIEGLSDWLDDHGMRSVNELRGRAIPQVQEWGEL 327
>gi|429219880|ref|YP_007181524.1| dihydroorotate dehydrogenase family protein [Deinococcus
peraridilitoris DSM 19664]
gi|429130743|gb|AFZ67758.1| dihydroorotate dehydrogenase family protein [Deinococcus
peraridilitoris DSM 19664]
Length = 459
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 140/330 (42%), Positives = 211/330 (63%), Gaps = 12/330 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + +++AF+ GWG V KT+ A V+N++ RY
Sbjct: 3 DLSIDFAGIRSPNPFWLASAPPSNSGYQVQKAFEAGWGGAVWKTI---GAPVLNISNRYG 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
L S GQ ++G N+ELISDRPLE L+E ++K +PD+ ++ S M E + A
Sbjct: 60 GL------SVYGQRLVGLNNMELISDRPLEVNLREIAEVKRNFPDRAVVVSAMVESDPRA 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W +++ R+E+TG D IE+N+ CPHGM ER MG+AVGQ E++ W+ A +PV K
Sbjct: 114 WADIVRRIEDTGADGIELNYGCPHGMSERGMGSAVGQVPEYCEQITRWVTEVARIPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT PAR + G++ +S INTI S++ ++L T P V GY + GGY+ AV
Sbjct: 174 LTPNITDITHPARAGVAGGAQALSLINTINSIINVNLDTFELTPSVGGYGSHGGYAGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL + +A++ +E + +SG+GG++T DAAEF+LLGA ++QVCT VM +G+
Sbjct: 234 KPIALNMLSEVARV--AEVRARGLPISGMGGIQTWRDAAEFLLLGATSLQVCTAVMHYGF 291
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+++ L + L +++ F+S+ D G S+
Sbjct: 292 RIIEDLTDGLSNWLDDKGFASVHDVIGLSL 321
>gi|149915521|ref|ZP_01904047.1| dihydroorotate dehydrogenase family protein [Roseobacter sp.
AzwK-3b]
gi|149810413|gb|EDM70256.1| dihydroorotate dehydrogenase family protein [Roseobacter sp.
AzwK-3b]
Length = 434
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
+L T G++ PNPF + S PP ++RAF+ GWG VV KT+ D V+NV PRY
Sbjct: 3 NLETTFVGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEDGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPL+T L E ++K YPD+ LIAS+M N+ +
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRPLQTNLDEMTRVKRDYPDRALIASLMVPVNEDS 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ +++RV ETG D +E+NF CPHGM ER MG+AVGQ +++V W + +PV K
Sbjct: 118 WKSILERVIETGCDGVELNFGCPHGMSERGMGSAVGQVPEYVQQVTEWCKKHSDLPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNI DI +PA+ A G++ VS INTI S+ +DL PEP ++G GGY AV
Sbjct: 178 LTPNIADIRKPAQAAKDGGADAVSLINTINSITSVDLDLFSPEPMIDGQGAHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + N + +SGIGGV T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DPNLRGLPISGIGGVTTWRDAAEFMALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL-------VRMQQEA 390
+V+ + L +M F+SI++ G ++ +L R+ Q+A
Sbjct: 294 KIVQEMISGLSQYMDEKGFASIDELVGRAVPNVVNWQDLNLNYVTKARIDQDA 346
>gi|167590078|ref|ZP_02382466.1| dihydroorotate dehydrogenase family protein [Burkholderia ubonensis
Bu]
Length = 435
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREITQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPIPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ T DAAEFI+LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDPQT----PNLPISGIGGISTWRDAAEFIVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVSDLVDGLSNWMDEKGYATLDDVRGRAVPNVTDWQYLNLNYDIKARIDQDRCIQCGL 350
>gi|163758602|ref|ZP_02165689.1| putative dihydropyrimidine dehydrogenase [Hoeflea phototrophica
DFL-43]
gi|162283892|gb|EDQ34176.1| putative dihydropyrimidine dehydrogenase [Hoeflea phototrophica
DFL-43]
Length = 436
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 212/358 (59%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RAF+ GWG VV KT+ V+NV PRY
Sbjct: 3 DLSTNFLGIKSPNPFWLASAPPTDKAYNVERAFEAGWGGVVWKTLGEAGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA +++G NIELI+DR LET L+E ++K +PD+ +I SIM +A+
Sbjct: 63 -----GAIWGPDRRLLGLNNIELITDRDLETNLREIAEVKKRWPDRAMIVSIMVPCEEAS 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ RVE+TG D IE+NF CPHGM ER MG+AVGQ ++ V W +PV K
Sbjct: 118 WKAILPRVEDTGADGIELNFGCPHGMSERGMGSAVGQVPEYIQMVAEWCKQYCRLPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A G++ VS INTI S++ +DL P P ++G + GGY AV
Sbjct: 178 LTPNITDIRYPARAAKAGGADAVSLINTISSIVSVDLDNFAPMPTIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ + +SGIGGV+T DAAEFI LG TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIARDAET----RGLPISGIGGVQTWRDAAEFIALGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M + +I DF+G ++ T + L + + I Q ++ G
Sbjct: 294 KIVQEMAQGLSDWMDEKGYETIADFQGRAVPNVTDWQYLNLNYVTKAKIDQDLCIKCG 351
>gi|254452317|ref|ZP_05065754.1| dihydroorotate dehydrogenase family protein [Octadecabacter
arcticus 238]
gi|198266723|gb|EDY90993.1| dihydroorotate dehydrogenase family protein [Octadecabacter
arcticus 238]
Length = 434
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 213/358 (59%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ ++ V+NV PRY
Sbjct: 3 DLTTDFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGMEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ A +++G NIELI+DR L T L+E K++KA YPD+ +I S+M + A
Sbjct: 63 GVIYG-----ADRRVLGINNIELITDRDLHTNLEEIKRVKADYPDRAIIVSLMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W++++ VE+TG D IE+NF CPHGM ER MG+AVGQ +E V W + PV K
Sbjct: 118 WKDILPLVEDTGADGIELNFGCPHGMAERGMGSAVGQVPEYIEMVTRWCKQYYSKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PA A+R G++ VS INTI S+ ++L ++ PEP ++G T GGY AV
Sbjct: 178 LTPNITDIRKPAAAAMRGGADAVSLINTINSITSVNLDSMSPEPSIDGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V I++ ++ K +SGIGGV T DAAEFI LG VQVCT M +G+
Sbjct: 238 KPIAMSMVSEISRFEET----KGLPISGIGGVTTWRDAAEFITLGCGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L +M +SI DF GA++ T + L + + I Q + G
Sbjct: 294 KIVQEMISGLSQWMDEKGHTSIADFMGAAVPNTTDWQYLNLNYVAKAVINQDDCISCG 351
>gi|407785090|ref|ZP_11132238.1| dihydropyrimidine dehydrogenase subunit B [Celeribacter
baekdonensis B30]
gi|407203122|gb|EKE73109.1| dihydropyrimidine dehydrogenase subunit B [Celeribacter
baekdonensis B30]
Length = 433
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 209/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ T G+ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTSTFCGITSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E ++K +PD+ LIAS+M + +
Sbjct: 63 -----GAIHGADRRLLGLNNIELITDRPLEVNLEEMTRVKKDFPDRALIASVMVPCDAES 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ +I R+ ETG D E+NF CPHGM ER MGAAVGQ +E V W +PV K
Sbjct: 118 WKSIIPRIAETGCDGFELNFGCPHGMAERGMGAAVGQVPEYIEMVTRWCKEATGLPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNIT+I PA ALR G++ VS INTI S+ ++L + PEP ++G T GGY AV
Sbjct: 178 LTPNITNIILPAEAALRGGADAVSLINTINSITSVNLDSFAPEPMIDGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + + +SGIGGV T DAAEF+ LGA+ VQVCT M +G+
Sbjct: 238 KPIALNMVAEIARNPAT----ANLPISGIGGVTTWRDAAEFLALGASNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L +M F+S+ + G ++ T + L + + I Q + G
Sbjct: 294 KIVEEMISGLSQYMDEKGFTSVAEISGRAVPNVTDWQYLNLNHVTKAVINQDDCINCG 351
>gi|161522384|ref|YP_001585313.1| dihydropyrimidine dehydrogenase [Burkholderia multivorans ATCC
17616]
gi|189348740|ref|YP_001941936.1| dihydropyrimidine dehydrogenase [Burkholderia multivorans ATCC
17616]
gi|160345937|gb|ABX19021.1| dihydroorotate dehydrogenase family protein [Burkholderia
multivorans ATCC 17616]
gi|189338878|dbj|BAG47946.1| dihydroorotate oxidase [Burkholderia multivorans ATCC 17616]
Length = 435
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPIPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ T DAAEFI+LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDPET----PNLPISGIGGISTWRDAAEFIVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVSDLVDGLSNWMDDKGYATLDDVRGRAVPNVTDWKYLNLQYDIKARIDQDRCIQCGL 350
>gi|170696015|ref|ZP_02887153.1| dihydroorotate dehydrogenase family protein [Burkholderia graminis
C4D1M]
gi|170139095|gb|EDT07285.1| dihydroorotate dehydrogenase family protein [Burkholderia graminis
C4D1M]
Length = 442
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E Q+K +P++ +I S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREIAQVKRDWPERAMIVSLMVPCNEHDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNITDIRVGSRAAYKGGADGVSLINTINSIVAVDLDAMSPLPMVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ T DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDTET----PNLPISGIGGISTWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q K ++ GL
Sbjct: 293 IVTDLADGLSNWMDEKGYATLDDIRGRAVPNVTDWKYLNLNYSIKARIDQDKCIKCGL 350
>gi|397167364|ref|ZP_10490806.1| dihydroorotate dehydrogenase family domain protein [Enterobacter
radicincitans DSM 16656]
gi|396090722|gb|EJI88290.1| dihydroorotate dehydrogenase family domain protein [Enterobacter
radicincitans DSM 16656]
Length = 434
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 210/358 (58%), Gaps = 13/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G+ PNPF + S PP ++RAF GWG VV KT+ LD V+NV PRY
Sbjct: 3 DLHSNFLGIHSPNPFWLASAPPTDKEYNVERAFQAGWGGVVWKTLGLDP-HVVNVCGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ LR A +I+G NIELI+DR LET L+E ++K +PD+ ++ SIM + A
Sbjct: 62 STLRG-----ADRRILGLNNIELITDRSLETNLEEIARIKQRWPDRAVVVSIMVPCEEEA 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ +VE TG D IE+NF CPHGM ER MGAAVGQ +E V W ++PV K
Sbjct: 117 WKWILPQVEATGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWCKQYCSLPVIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A G++ VS INTI SVMG+DL + P + GGY AV
Sbjct: 177 LTPNITDIRYPARAAKAGGADAVSLINTINSVMGVDLDQMLMTPHTGNQGSHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V I + + + +SGIGG+ T DAAEFI LG TVQVCT VM+HG+
Sbjct: 237 KPIALNMVAEIGR----DAPMRGLPISGIGGISTWRDAAEFIALGCGTVQVCTAVMVHGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTT--HTELVRMQQEAIQQRKAVRKG 400
+V+ + L++ M F ++EDFRG ++ T + L +++ I Q ++ G
Sbjct: 293 QIVRDMISGLENHMDEKGFRTLEDFRGMALGSVTDWRYLNLNHVEKAVIDQTSCIKCG 350
>gi|221202549|ref|ZP_03575578.1| dihydroorotate dehydrogenase family protein [Burkholderia
multivorans CGD2M]
gi|221207748|ref|ZP_03580755.1| dihydroorotate dehydrogenase family protein [Burkholderia
multivorans CGD2]
gi|421470996|ref|ZP_15919327.1| dihydropyrimidine dehydrogenase [Burkholderia multivorans ATCC
BAA-247]
gi|221172245|gb|EEE04685.1| dihydroorotate dehydrogenase family protein [Burkholderia
multivorans CGD2]
gi|221177586|gb|EEE10004.1| dihydroorotate dehydrogenase family protein [Burkholderia
multivorans CGD2M]
gi|400226517|gb|EJO56591.1| dihydropyrimidine dehydrogenase [Burkholderia multivorans ATCC
BAA-247]
Length = 435
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPIPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ T DAAEFI+LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDPET----PNLPISGIGGISTWRDAAEFIVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVSDLVDGLSNWMDDKGYATLDDVRGRAVPNVTDWKYLNLQYDIKARIDQDRCIQCGL 350
>gi|91784371|ref|YP_559577.1| dihydropyrimidine dehydrogenase [Burkholderia xenovorans LB400]
gi|91688325|gb|ABE31525.1| dihydropyrimidine dehydrogenase (NADP+) / dihydroorotate oxidase B,
catalytic subunit [Burkholderia xenovorans LB400]
Length = 444
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ LKE Q+K +PD+ +I S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLKEIAQVKRDWPDRAMIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRLGSRAAYKGGADGVSLINTINSIVAVDLDAMSPLPMVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ + DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDAET----PNLPISGIGGISSWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q K ++ GL
Sbjct: 293 IVSDLADGLSNWMDEKGYATLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDKCIQCGL 350
>gi|146277498|ref|YP_001167657.1| dihydropyrimidine dehydrogenase [Rhodobacter sphaeroides ATCC
17025]
gi|145555739|gb|ABP70352.1| dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine
dehydrogenase (NADP+) [Rhodobacter sphaeroides ATCC
17025]
Length = 434
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/351 (41%), Positives = 209/351 (59%), Gaps = 12/351 (3%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRYARLRAGA 111
G++ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY GA
Sbjct: 10 GIRSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGPRY-----GA 64
Query: 112 NGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDR 171
A +++G NIELI+DRPLE L+E K +K YPD+ L+ S+M ++ +W++++ R
Sbjct: 65 IWGADRRLLGLNNIELITDRPLEVNLREIKSVKRDYPDRALVISLMVPCDEDSWKDILAR 124
Query: 172 VEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITD 231
+E+TG D +E+NF CPHGM ER MG+AVGQ +E V W+ + +P K+TPN+TD
Sbjct: 125 IEDTGADGVELNFGCPHGMAERGMGSAVGQVPEYIEMVTRWVKTHSRMPCIVKLTPNVTD 184
Query: 232 ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGK 291
I +PA A R G++ VS INTI S+ G+D+ P P ++G T GGY AV PIAL
Sbjct: 185 IRKPAEAAKRGGADAVSLINTINSITGVDIDAFAPMPMIDGKGTHGGYCGPAVKPIALNM 244
Query: 292 VMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351
V IA+ ++ +SGIGGV T DA EF+LLGA VQVCT VM +G+ +V+ +
Sbjct: 245 VAEIARNPETH----GLPISGIGGVTTWRDAVEFMLLGAGNVQVCTAVMTYGFRIVEEMI 300
Query: 352 EELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
L D+M F + D G ++ T + L + + I Q ++ G
Sbjct: 301 SGLSDYMDAKGFETTADLVGRAVPNVTDWQYLNLNYVTKAQIDQDLCIKCG 351
>gi|307729120|ref|YP_003906344.1| dihydroorotate dehydrogenase family protein [Burkholderia sp.
CCGE1003]
gi|307583655|gb|ADN57053.1| dihydroorotate dehydrogenase family protein [Burkholderia sp.
CCGE1003]
Length = 440
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPLE L+E Q+K +P++ +I S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLEVNLREIAQVKRDWPERAMIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MG+AVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGSAVGQVPEYIEMVTRWVKEGLRLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNITDIRLGSRAAYKGGADGVSLINTINSIVAVDLDAMSPLPMVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ T DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDEQT----PNLPISGIGGISTWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q K ++ GL
Sbjct: 293 IVTDLADGLSNWMDEKGYATLDDIRGRAVPNVTDWKYLNLNYSIKARIDQDKCIQCGL 350
>gi|254250832|ref|ZP_04944151.1| Dihydroorotate dehydrogenase 1 [Burkholderia cenocepacia PC184]
gi|124879966|gb|EAY67322.1| Dihydroorotate dehydrogenase 1 [Burkholderia cenocepacia PC184]
Length = 508
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/386 (40%), Positives = 223/386 (57%), Gaps = 16/386 (4%)
Query: 22 RPGLRLPSRIGLRVLA-SDSASAEP---DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRA 77
R R P R R D EP DL + G+ PNPF + S PP + RA
Sbjct: 46 RATRRRPDRATHRTHTEHDPILTEPNMADLRCIIAGITSPNPFWLASAPPTDKAYNVNRA 105
Query: 78 FDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETML 137
F+ GWG VV KT+ LD V+NV+ RY ++ NG +I G NIELI+DRPL+ L
Sbjct: 106 FEAGWGGVVWKTLGLDP-HVVNVSSRYGAVQW--NGQ---RIAGLNNIELITDRPLDVNL 159
Query: 138 KEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGA 197
+E Q+K +PD+ LI S+M N+ W+ ++ VE+TG DA+E+NF CPHGM ER MGA
Sbjct: 160 REIAQVKRDWPDRALIVSLMVPCNERDWKWILPLVEDTGADAVELNFGCPHGMSERGMGA 219
Query: 198 AVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVM 257
AVGQ +E V W+ +P K+TPNI+DI +R A + G++GVS INTI S++
Sbjct: 220 AVGQVPEYVEMVTRWVKEGTKLPCLVKLTPNISDIRMGSRAAYKGGADGVSLINTINSIV 279
Query: 258 GIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVE 317
+DL + P P V+G T GGY AV PIAL V IA+ + D +SGIGG+
Sbjct: 280 AVDLDQMAPMPTVDGKGTHGGYCGPAVKPIALNMVAEIAR----DPETPDLPISGIGGIS 335
Query: 318 TGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYF 377
+ DAAEF++LGA +VQVCT M +G+ +V L + L ++M +++++D RG ++
Sbjct: 336 SWRDAAEFMVLGAGSVQVCTAAMHYGFRIVSDLADGLSNWMDEKGYATLDDIRGRAVPNV 395
Query: 378 T--THTELVRMQQEAIQQRKAVRKGL 401
T + L + I Q + ++ GL
Sbjct: 396 TDWKYLNLKYDIKARIDQDRCIQCGL 421
>gi|221215696|ref|ZP_03588657.1| dihydroorotate dehydrogenase family protein [Burkholderia
multivorans CGD1]
gi|221164398|gb|EED96883.1| dihydroorotate dehydrogenase family protein [Burkholderia
multivorans CGD1]
Length = 435
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPIPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ T DAAEFI+LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDPET----PNLPISGIGGISTWRDAAEFIVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M ++ ++D RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVSDLVDGLSNWMDDKGYAMLDDVRGRAVPNVTDWKYLNLQYDIKARIDQDRCIQCGL 350
>gi|107023146|ref|YP_621473.1| dihydropyrimidine dehydrogenase [Burkholderia cenocepacia AU 1054]
gi|116686614|ref|YP_839861.1| dihydropyrimidine dehydrogenase [Burkholderia cenocepacia HI2424]
gi|105893335|gb|ABF76500.1| dihydroorotate oxidase B, catalytic subunit [Burkholderia
cenocepacia AU 1054]
gi|116652329|gb|ABK12968.1| dihydropyrimidine dehydrogenase (NADP+) [Burkholderia cenocepacia
HI2424]
Length = 437
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ + DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDPET----PNLPISGIGGISSWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVSDLADGLSNWMDEKGYATLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGL 350
>gi|134290941|ref|YP_001114710.1| dihydropyrimidine dehydrogenase [Burkholderia vietnamiensis G4]
gi|134134130|gb|ABO58455.1| dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine
dehydrogenase (NADP+) / dihydroorotate oxidase B,
catalytic subunit [Burkholderia vietnamiensis G4]
Length = 435
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLAEIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ + DAAEFI+LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDPQT----PNLPISGIGGISSWRDAAEFIVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVSDLVDGLSNWMDDKGYATLDDVRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGL 350
>gi|407714154|ref|YP_006834719.1| dihydropyrimidine dehydrogenase [Burkholderia phenoliruptrix
BR3459a]
gi|407236338|gb|AFT86537.1| dihydropyrimidine dehydrogenase (NADP+) [Burkholderia
phenoliruptrix BR3459a]
Length = 442
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E Q+K +P++ +I S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREIAQVKRDWPERAMIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MG+AVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGSAVGQVPEYIEMVTRWVKEGTRLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNITDIRLGSRAAYKGGADGVSLINTINSIVAVDLDAMSPLPMVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ T DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDEQT----PNLPISGIGGISTWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q K ++ GL
Sbjct: 293 IVSDLADGLSNWMDEKGYATLDDIRGRAVPNVTDWKYLNLNYSIKARIDQDKCIQCGL 350
>gi|387905856|ref|YP_006336193.1| Dihydropyrimidine dehydrogenase [Burkholderia sp. KJ006]
gi|387580748|gb|AFJ89462.1| Dihydropyrimidine dehydrogenase [Burkholderia sp. KJ006]
Length = 435
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLAEIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ + DAAEFI+LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDPQT----PNLPISGIGGISSWRDAAEFIVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVSDLVDGLSNWMDDKGYATLDDVRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGL 350
>gi|85704751|ref|ZP_01035852.1| dihydropyrimidine dehydrogenase [Roseovarius sp. 217]
gi|85670569|gb|EAQ25429.1| dihydropyrimidine dehydrogenase [Roseovarius sp. 217]
Length = 434
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/339 (43%), Positives = 201/339 (59%), Gaps = 10/339 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G+ PNPF + S PP ++RAF+ GWG VV KT+ V+NV PRY
Sbjct: 3 DLTTNFIGITSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEAGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE LKE +++K +PD+ LIAS+M N+ A
Sbjct: 63 -----GAIYGADRRLLGLNNIELITDRPLEVNLKEMRRVKRDWPDRALIASLMVPVNEDA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ RVE+TG D +E+NF CPHGM ER MG+AVGQ + +V W + +PV K
Sbjct: 118 WREILQRVEDTGCDGVELNFGCPHGMSERGMGSAVGQVPEYVGQVAYWCKKHSNLPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PA+ A G++ VS INTI S+ +DL PEP ++G GGY AV
Sbjct: 178 LTPNITDIRKPAQAAKEGGADAVSLINTINSITSVDLDLFAPEPTIDGQGAHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGGV T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIALNMVAEIARDPAT----AGLPISGIGGVTTWRDAAEFMALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + L +M F+S++ G ++ +L
Sbjct: 294 KIVQEMISGLSQYMDDKGFTSVDQLVGRAVPNVVNWKDL 332
>gi|90418415|ref|ZP_01226327.1| dihydroorotate dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
gi|90338087|gb|EAS51738.1| dihydroorotate dehydrogenase [Aurantimonas manganoxydans SI85-9A1]
Length = 447
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 212/358 (59%), Gaps = 13/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
+L+ G+ PNPF + S PP ++RAF++GWG VV KT+ D V+NV PRY
Sbjct: 3 NLATNFLGISSPNPFWLASAPPTDKEYNVQRAFEQGWGGVVWKTLGEDP-PVVNVNGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA +++G NIELI+DR L+T L+E ++K +PD+ +I S+M +A
Sbjct: 62 -----GAIYGPDRRLLGLNNIELITDRALDTNLEEIARVKRNWPDRAMIVSLMVPCEEAP 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W++++ VEETG D +E+NF CPHGM ER MGAAVGQ +E V W + +PV K
Sbjct: 117 WQKILALVEETGADGVELNFGCPHGMSERGMGAAVGQVPEYIEMVARWCKQHSKLPVIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A R G++ VS INTI S++ IDL P P ++G + GGY AV
Sbjct: 177 LTPNITDIRFPARAARRGGADAVSLINTISSIVSIDLDNFAPTPTIDGKGSHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +SGIGG+ T DAAEFI LG TVQVCT M +G+
Sbjct: 237 KPIALNMVAEIARDPET----IGMPMSGIGGITTWRDAAEFIALGCGTVQVCTAAMTYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+VK + L D+M ++SIEDFRG + T + L + + I Q K + G
Sbjct: 293 KVVKEMSSGLSDWMDEKGYASIEDFRGRAAPNVTDWQYLNLNYVTKARIDQDKCISCG 350
>gi|197295563|ref|YP_002154104.1| dihydropyrimidine dehydrogenase [Burkholderia cenocepacia J2315]
gi|444360505|ref|ZP_21161729.1| dihydropyrimidine dehydrogenase [Burkholderia cenocepacia BC7]
gi|444365815|ref|ZP_21165927.1| dihydropyrimidine dehydrogenase [Burkholderia cenocepacia
K56-2Valvano]
gi|195945042|emb|CAR57667.1| putative dihydroorotate dehydrogenase family protein [Burkholderia
cenocepacia J2315]
gi|443599944|gb|ELT68183.1| dihydropyrimidine dehydrogenase [Burkholderia cenocepacia BC7]
gi|443605623|gb|ELT73464.1| dihydropyrimidine dehydrogenase [Burkholderia cenocepacia
K56-2Valvano]
Length = 438
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ + DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDPET----PNLPISGIGGISSWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVSDLADGLSNWMDEKGYATLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGL 350
>gi|170701515|ref|ZP_02892467.1| dihydroorotate dehydrogenase family protein [Burkholderia ambifaria
IOP40-10]
gi|170133572|gb|EDT01948.1| dihydroorotate dehydrogenase family protein [Burkholderia ambifaria
IOP40-10]
Length = 435
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ + DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDPET----PNLPISGIGGISSWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVTDLADGLSNWMDEKGYATLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGL 350
>gi|172065004|ref|YP_001815716.1| dihydropyrimidine dehydrogenase [Burkholderia ambifaria MC40-6]
gi|171997246|gb|ACB68163.1| dihydroorotate dehydrogenase family protein [Burkholderia ambifaria
MC40-6]
Length = 435
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ + DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDPET----PNLPISGIGGISSWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVTDLADGLSNWMDEKGYATLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGL 350
>gi|171320519|ref|ZP_02909546.1| dihydroorotate dehydrogenase family protein [Burkholderia ambifaria
MEX-5]
gi|171094239|gb|EDT39319.1| dihydroorotate dehydrogenase family protein [Burkholderia ambifaria
MEX-5]
Length = 435
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ + DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDPET----PNLPISGIGGISSWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVTDLADGLSNWMDEKGYATLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGL 350
>gi|323526708|ref|YP_004228861.1| dihydroorotate dehydrogenase family protein [Burkholderia sp.
CCGE1001]
gi|323383710|gb|ADX55801.1| dihydroorotate dehydrogenase family protein [Burkholderia sp.
CCGE1001]
Length = 442
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E Q+K +P++ +I S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREIAQVKRDWPERAMIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MG+AVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGSAVGQVPEYIEMVTRWVKEGTRLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNITDIRLGSRAAYKGGADGVSLINTINSIVAVDLDAMSPLPMVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ T DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDEQT----PNLPISGIGGISTWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q K ++ GL
Sbjct: 293 IVSDLADGLSNWMDEKGYATLDDIRGRAVPNVTDWKYLNLNYSIKARIDQDKCIQCGL 350
>gi|390571472|ref|ZP_10251713.1| dihydropyrimidine dehydrogenase subunit B [Burkholderia terrae
BS001]
gi|420251732|ref|ZP_14754893.1| dihydroorotate dehydrogenase family protein [Burkholderia sp. BT03]
gi|389936575|gb|EIM98462.1| dihydropyrimidine dehydrogenase subunit B [Burkholderia terrae
BS001]
gi|398057255|gb|EJL49227.1| dihydroorotate dehydrogenase family protein [Burkholderia sp. BT03]
Length = 437
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 218/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG ++ G NIELI+DRPLE L+E K++K +PD+ +I S+M N+ W
Sbjct: 62 AVQW--NGQ---RMAGLNNIELITDRPLEVNLREIKEVKRDWPDRAMIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MG+AVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGSAVGQVPEYIEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ + +SGIGG+ T DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIAR----DSETPGLPISGIGGISTWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL-VRMQQEA-IQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T L ++ +A I Q K ++ GL
Sbjct: 293 IVSDLADGLSNWMDEKGYATLDDIRGRAVPNVTDWKYLNMKYDIKARIDQDKCIQCGL 350
>gi|170735207|ref|YP_001774321.1| dihydropyrimidine dehydrogenase [Burkholderia cenocepacia MC0-3]
gi|169821245|gb|ACA95826.1| dihydroorotate dehydrogenase family protein [Burkholderia
cenocepacia MC0-3]
Length = 437
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 215/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRY- 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
GA +I G NIELI+DRPL+ L+E Q+K +PD+ LI S+M N+ W
Sbjct: 61 ----GAVQWNDQRIAGLNNIELITDRPLDVNLREIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ + DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDPET----PNLPISGIGGISSWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVSDLADGLSNWMDEKGYATLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGL 350
>gi|186476292|ref|YP_001857762.1| dihydropyrimidine dehydrogenase [Burkholderia phymatum STM815]
gi|184192751|gb|ACC70716.1| dihydroorotate dehydrogenase family protein [Burkholderia phymatum
STM815]
Length = 436
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 215/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MG+AVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGSAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAWKGGADGVSLINTINSIVAVDLDQMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ + +SGIGG+ + DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIAR----DPETPGLPISGIGGISSWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V + + L ++M ++++ED RG ++ T + L + I Q K ++ GL
Sbjct: 293 IVSDMADGLSNWMDEKGYATLEDIRGRAVPNVTDWKYLNLKYDIKARIDQHKCIQCGL 350
>gi|115360706|ref|YP_777843.1| dihydropyrimidine dehydrogenase [Burkholderia ambifaria AMMD]
gi|115286034|gb|ABI91509.1| dihydroorotate oxidase B, catalytic subunit / dihydrouracil
dehydrogenase (NAD+) / dihydropyrimidine dehydrogenase
(NADP+) [Burkholderia ambifaria AMMD]
Length = 435
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDQMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ + DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDPET----PNLPISGIGGISSWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVTDLADGLSNWMDEKGYATLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGL 350
>gi|330992501|ref|ZP_08316449.1| hypothetical protein SXCC_02408 [Gluconacetobacter sp. SXCC-1]
gi|329760700|gb|EGG77196.1| hypothetical protein SXCC_02408 [Gluconacetobacter sp. SXCC-1]
Length = 424
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL G++ PNPF + S PP ++RAF+ GWG VV KT+ D V+NV+ RY
Sbjct: 3 DLRTNFVGIRSPNPFWLASAPPTDKEYNIRRAFEAGWGGVVWKTLGEDP-PVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L NG+ ++IG NIELISDRPL T + E K +K YPD+ ++ S+M + +W
Sbjct: 62 SL--DYNGT---RMIGLNNIELISDRPLATNIAEIKSVKRDYPDRAVVVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ +E V W +PV K+
Sbjct: 117 KAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTRWCKQNTRMPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT+I PAR ALR G++ VS INTI SV+G+DL + P P V+G T GGY AV
Sbjct: 177 TPNITNILMPARAALRGGADAVSLINTIQSVIGVDLDLMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + IA+ + +SGIGG+ + DAAEF+ +GA+T+QVCT M +G+
Sbjct: 237 PIALRMIGDIAR----DPELARLPISGIGGIGSWRDAAEFLAMGASTLQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL-VRMQQEA-IQQRKAVRKGL 401
+V+ + + L +M +++I+D G +IE F +L ++ A I Q ++ GL
Sbjct: 293 IVEDMADGLSAWMDQKGYATIDDVTGRAIERFVPWNQLNMKFNTIAKIDQDACIKCGL 350
>gi|77463755|ref|YP_353259.1| dihydropyrimidine dehydrogenase [Rhodobacter sphaeroides 2.4.1]
gi|77388173|gb|ABA79358.1| dihydroorotate oxidase B, catalytic subunit / dihydropyrimidine
dehydrogenase (NADP+) / dihydrouracil dehydrogenase
(NAD+) [Rhodobacter sphaeroides 2.4.1]
Length = 434
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/351 (41%), Positives = 208/351 (59%), Gaps = 12/351 (3%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRYARLRAGA 111
G++ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY GA
Sbjct: 10 GIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGPRY-----GA 64
Query: 112 NGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDR 171
A +++G NIELI+DRPLE L+E K +K YPD+ L+ S+M ++ +W+ ++
Sbjct: 65 IYGADRRLLGLNNIELITDRPLEVNLREIKSVKRDYPDRALVVSLMVPCDEESWKAILAH 124
Query: 172 VEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITD 231
VE+TG D +E+NF CPHGM ER MG+AVGQ +E V W+ + +P K+TPN+TD
Sbjct: 125 VEDTGADGVELNFGCPHGMAERGMGSAVGQVPEYIEMVTRWVKQHSQMPCIVKLTPNVTD 184
Query: 232 ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGK 291
I +PA A R G++ VS INTI S+ G+D+ + P P ++G T GGY AV PIAL
Sbjct: 185 IRKPAEAARRGGADAVSLINTINSITGVDIDSFAPMPTIDGKGTHGGYCGPAVKPIALNM 244
Query: 292 VMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351
V IA+ ++ +SGIGGV T DA EF+LLGA VQVCT M +G+ +V+ +
Sbjct: 245 VAEIARNPETH----GLPISGIGGVTTWRDAVEFMLLGAGNVQVCTAAMTYGFRVVQEMI 300
Query: 352 EELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
L D+M F+S D G ++ T + L + + I Q ++ G
Sbjct: 301 SGLSDYMDAKGFASTADLVGRAVPNVTDWQYLNLNYVTKAEIDQDLCIKCG 351
>gi|126462585|ref|YP_001043699.1| dihydropyrimidine dehydrogenase [Rhodobacter sphaeroides ATCC
17029]
gi|221639626|ref|YP_002525888.1| dihydropyrimidine dehydrogenase [Rhodobacter sphaeroides KD131]
gi|126104249|gb|ABN76927.1| dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine
dehydrogenase (NADP+) [Rhodobacter sphaeroides ATCC
17029]
gi|221160407|gb|ACM01387.1| Dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine
dehydrogenase [Rhodobacter sphaeroides KD131]
Length = 434
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/351 (41%), Positives = 208/351 (59%), Gaps = 12/351 (3%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRYARLRAGA 111
G++ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY GA
Sbjct: 10 GIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGPRY-----GA 64
Query: 112 NGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDR 171
A +++G NIELI+DRPLE L+E K +K YPD+ L+ S+M ++ +W+ ++
Sbjct: 65 IYGADRRLLGLNNIELITDRPLEVNLREIKSVKRDYPDRALVVSLMVPCDEESWKAILAH 124
Query: 172 VEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITD 231
VE+TG D +E+NF CPHGM ER MG+AVGQ +E V W+ + +P K+TPN+TD
Sbjct: 125 VEDTGADGVELNFGCPHGMAERGMGSAVGQVPEYIEMVTRWVKQHSRMPCIVKLTPNVTD 184
Query: 232 ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGK 291
I +PA A R G++ VS INTI S+ G+D+ + P P ++G T GGY AV PIAL
Sbjct: 185 IRKPAEAARRGGADAVSLINTINSITGVDIDSFAPMPTIDGKGTHGGYCGPAVKPIALNM 244
Query: 292 VMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351
V IA+ ++ +SGIGGV T DA EF+LLGA VQVCT M +G+ +V+ +
Sbjct: 245 VAEIARNPETH----GLPISGIGGVTTWRDAVEFMLLGAGNVQVCTAAMTYGFRVVQEMI 300
Query: 352 EELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
L D+M F+S D G ++ T + L + + I Q ++ G
Sbjct: 301 SGLSDYMDAKGFASTADLVGRAVPNVTDWQYLNLNYVTKAQIDQDLCIKCG 351
>gi|332558611|ref|ZP_08412933.1| dihydropyrimidine dehydrogenase subunit B [Rhodobacter sphaeroides
WS8N]
gi|332276323|gb|EGJ21638.1| dihydropyrimidine dehydrogenase subunit B [Rhodobacter sphaeroides
WS8N]
Length = 434
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/351 (41%), Positives = 208/351 (59%), Gaps = 12/351 (3%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRYARLRAGA 111
G++ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY GA
Sbjct: 10 GIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGPRY-----GA 64
Query: 112 NGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDR 171
A +++G NIELI+DRPLE L+E K +K YPD+ L+ S+M ++ +W+ ++
Sbjct: 65 IYGADRRLLGLNNIELITDRPLEVNLREIKSVKRDYPDRALVVSLMVPCDEESWKAILAH 124
Query: 172 VEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITD 231
VE+TG D +E+NF CPHGM ER MG+AVGQ +E V W+ + +P K+TPN+TD
Sbjct: 125 VEDTGADGVELNFGCPHGMAERGMGSAVGQVPEYIEMVTRWVKQHSRMPCIVKLTPNVTD 184
Query: 232 ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGK 291
I +PA A R G++ VS INTI S+ G+D+ + P P ++G T GGY AV PIAL
Sbjct: 185 IRKPAEAARRGGADAVSLINTINSITGVDIDSFAPMPTIDGKGTHGGYCGPAVKPIALNM 244
Query: 292 VMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351
V IA+ ++ +SGIGGV T DA EF+LLGA VQVCT M +G+ +V+ +
Sbjct: 245 VAEIARNPETH----GLPISGIGGVTTWRDAVEFMLLGAGNVQVCTAAMTYGFRVVQEMI 300
Query: 352 EELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
L D+M F+S D G ++ T + L + + I Q ++ G
Sbjct: 301 SGLSDYMDAKGFASTADLVGRAVPNVTDWQYLNLNYVAKAQIDQDLCIKCG 351
>gi|88799395|ref|ZP_01114973.1| dihydropyrimidine dehydrogenase [Reinekea blandensis MED297]
gi|88777934|gb|EAR09131.1| dihydropyrimidine dehydrogenase [Reinekea sp. MED297]
Length = 424
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 215/358 (60%), Gaps = 14/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS G++ PNPF + S PP ++RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSTDFVGIKSPNPFWLASAPPTDKAYNVERAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ + G++ G+ NIELI+DR LE L+E + +K +PD+ L+ S+M + AW
Sbjct: 62 AIY-----DSYGEVSGFNNIELITDRSLEINLREIEAVKKSWPDRALVVSLMVPCEENAW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG D +E+NF CPHGMPER MGAAVGQ +E+V W + +PV K+
Sbjct: 117 KTIVKEVEKTGADGLELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKQYSKLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ GIDL + P V+G ST GGY AV
Sbjct: 177 TPNITDIRYSARAANRGGADAVSLINTINSITGIDLDQMTARPIVDGKSTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ +SGIGG+ DAAEFI LGA VQVCT M++G+
Sbjct: 237 PIALNMVSEIARDPETQ----RLPISGIGGISNWRDAAEFISLGAGCVQVCTAAMVYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEA---IQQRKAVRKG 400
+VK + + L ++M + + DF+G ++ TT + + M + I Q K + G
Sbjct: 293 IVKEMQDGLNNWMDSKGYERLTDFQGLAVPN-TTDWKYLNMNYKVVADIDQDKCIGCG 349
>gi|78059775|ref|YP_366350.1| dihydropyrimidine dehydrogenase [Burkholderia sp. 383]
gi|77964325|gb|ABB05706.1| dihydroorotate oxidase B, catalytic subunit / dihydrouracil
dehydrogenase (NAD+) / dihydropyrimidine dehydrogenase
(NADP+) [Burkholderia sp. 383]
Length = 438
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDHMAPMPMVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ + + +SGIGG+ + DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIAR----DPETPNLPISGIGGISSWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVSDLADGLSNWMDEKGYATLDDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGL 350
>gi|89067347|ref|ZP_01154860.1| dihydropyrimidine dehydrogenase [Oceanicola granulosus HTCC2516]
gi|89046916|gb|EAR52970.1| dihydropyrimidine dehydrogenase [Oceanicola granulosus HTCC2516]
Length = 434
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 209/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTTDFVGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E ++KA YPD+ LIASIM +AA
Sbjct: 63 -----GAIYGADRRLLGLNNIELITDRPLEVNLEEMARVKADYPDRALIASIMVPCEEAA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ RV ETG D IE+NF CPHGM ER MG+AVGQ +E V W PV K
Sbjct: 118 WKAILPRVAETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYYDRPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PA A G++ VS INTI S+ G+DL P P ++G + GGY AV
Sbjct: 178 LTPNITDIRKPATAAKNGGADAVSLINTINSITGVDLDNFAPMPTIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V IA+ ++ + +SGIGG+ T DAAEF+ LG VQVCT M +G+
Sbjct: 238 KPIAMSMVSEIARNPET----RGLPISGIGGITTWRDAAEFMALGCGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + +L +M + S DF G ++ T + L + + I Q ++ G
Sbjct: 294 KIVEEMTRDLSAWMDEKGYRSTADFVGKAVPNVTDWQYLNLNYVTKARIDQDLCIKCG 351
>gi|429209752|ref|ZP_19200979.1| Dihydropyrimidine dehydrogenase [Rhodobacter sp. AKP1]
gi|428187295|gb|EKX55880.1| Dihydropyrimidine dehydrogenase [Rhodobacter sp. AKP1]
Length = 434
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 146/351 (41%), Positives = 208/351 (59%), Gaps = 12/351 (3%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRYARLRAGA 111
G++ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY GA
Sbjct: 10 GIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGPRY-----GA 64
Query: 112 NGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDR 171
A +++G NIELI+DRPLE L+E K +K YPD+ L+ S+M ++ +W+ ++
Sbjct: 65 IYGADRRLLGLNNIELITDRPLEVNLREIKSVKRDYPDRALVVSLMVPCDEESWKAILAH 124
Query: 172 VEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITD 231
VE+TG D +E+NF CPHGM ER MG+AVGQ +E V W+ + +P K+TPN+TD
Sbjct: 125 VEDTGADGVELNFGCPHGMAERGMGSAVGQVPEYIEMVTRWVKQHSRMPCIVKLTPNVTD 184
Query: 232 ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGK 291
I +PA A R G++ VS INTI S+ G+D+ + P P ++G T GGY AV PIAL
Sbjct: 185 IRKPAEAARRGGADAVSLINTINSITGVDIDSFVPMPTIDGKGTHGGYCGPAVKPIALNM 244
Query: 292 VMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351
V IA+ ++ +SGIGGV T DA EF+LLGA VQVCT M +G+ +V+ +
Sbjct: 245 VAEIARNPETH----GLPISGIGGVTTWRDAVEFMLLGAGNVQVCTAAMTYGFRVVQEMI 300
Query: 352 EELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
L D+M F+S D G ++ T + L + + I Q ++ G
Sbjct: 301 SGLSDYMDAKGFASTADLVGRAVPNVTDWQYLNLNYVTKAQIDQDLCIKCG 351
>gi|56696653|ref|YP_167014.1| dihydropyrimidine dehydrogenase [Ruegeria pomeroyi DSS-3]
gi|56678390|gb|AAV95056.1| dihydroorotate dehydrogenase family protein [Ruegeria pomeroyi
DSS-3]
Length = 434
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 209/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLKTNFLGIESPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLET L+E ++KA YPD+ +I SIM +A
Sbjct: 63 -----GAIYGADRRLLGLNNIELITDRPLETNLEEIARVKADYPDRAVIVSIMVPCEEAE 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ RV ETG D IE+NF CPHGM ER MGAAVGQ +E V W PV K
Sbjct: 118 WKAILPRVAETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWCKTYYDKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A G++ VS INTI S+ ++L PEP ++G + GGY AV
Sbjct: 178 LTPNITDIRYPARAARNGGADAVSLINTISSITSVNLDNFSPEPSIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V I++ ++ +SGIGGV T DAAEF+ LG TVQVCT M +G+
Sbjct: 238 KPIAMNMVAEISRDPATQ----GLPISGIGGVTTWRDAAEFMSLGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L +M ++S+ DF G ++ T + L + + I Q + ++ G
Sbjct: 294 RVVEEMKTGLSQWMDEKGYTSVNDFIGRAVPNVTDWQYLNLNYVAKAKIDQDQCIKCG 351
>gi|377813145|ref|YP_005042394.1| dihydropyrimidine dehydrogenase [Burkholderia sp. YI23]
gi|357937949|gb|AET91507.1| dihydropyrimidine dehydrogenase [Burkholderia sp. YI23]
Length = 428
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 220/358 (61%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL+ + G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLTCNIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG ++ G NIELI+DRPL+ L+E +Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RMAGLNNIELITDRPLDVNLREIEQVKRDWPDRALIVSLMVPCNEHDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ +VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILRQVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAFKGGADGVSLINTINSIVAVDLDQMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ + DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDPET----PNLPISGIGGISSWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL-VRMQQEA-IQQRKAVRKGL 401
+V L + L ++M +++++ RG ++ T L ++ +A I Q K ++ GL
Sbjct: 293 IVSDLADGLSNWMDEKGYATLDAIRGRAVANVTDWKNLNLKYDIKARIDQDKCIKCGL 350
>gi|163744663|ref|ZP_02152023.1| dihydropyrimidine dehydrogenase [Oceanibulbus indolifex HEL-45]
gi|161381481|gb|EDQ05890.1| dihydropyrimidine dehydrogenase [Oceanibulbus indolifex HEL-45]
Length = 437
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 202/339 (59%), Gaps = 10/339 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RA++ GWG VV KT+ ++ V+NV PRY
Sbjct: 3 DLRSEFIGIKSPNPFWLASAPPTDKEYNVRRAYEAGWGGVVWKTLGMEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K +K YPD+ LIASIM + A
Sbjct: 63 -----GAIYGADRRLLGLNNIELITDRPLEVNLREMKAVKRDYPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPHVEETGADGIELNFGCPHGMAERGMGSAVGQVPEYIEMVTRWCKMYTRMPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNIT++ PA A R G++ VS INTI S+ +DL PEP ++G T GGY AV
Sbjct: 178 LTPNITNVLYPAEAAKRGGADAVSLINTINSITSVDLDLFSPEPMIDGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +SGIGGV T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIALNMVAEIARNPETH----GLPISGIGGVTTWRDAAEFLALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + L ++M +S+++ G ++ T +L
Sbjct: 294 KVVQEMISGLSEYMDEKGMTSVDELVGRAVPNVTDWNQL 332
>gi|347751376|ref|YP_004858941.1| dihydroorotate dehydrogenase family protein [Bacillus coagulans
36D1]
gi|347583894|gb|AEP00161.1| dihydroorotate dehydrogenase family protein [Bacillus coagulans
36D1]
Length = 426
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 204/338 (60%), Gaps = 13/338 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+L++ + G++ PNPF + S PP + ++RAF+ GWG VV KT+ ++NVT R+A
Sbjct: 3 NLNVEITGIRSPNPFWLASAPPTNSGYQVQRAFEAGWGGVVWKTL---GDPILNVTSRFA 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L ++ G+ NIELI+DRPL+ LKE + K + D+ +IAS+M E + W
Sbjct: 60 ALSYSGR-----RMAGFNNIELITDRPLDVNLKEITETKKKFSDRAIIASVMVEPKREKW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ RVE+ G+D +E+NF CPHGM ER MGAA GQ +L+E+ W+ A PV K+
Sbjct: 115 HEIVKRVEDAGVDGLELNFGCPHGMAERGMGAASGQVPQLVEQQTYWVKEAAKTPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDIT A A++ G++ VS INTI S+MG+DL T + P V G T GGY AV
Sbjct: 175 TPNITDITATAFAAVQGGADAVSMINTINSLMGVDLDTWQTVPHVAGLGTHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V A+ D +SGIGG+ T DAAEF+L+GA+ VQVCT VM HG+
Sbjct: 235 PIALSMVAECAR-----DPDIPVPISGIGGIATWKDAAEFMLMGASNVQVCTAVMHHGFS 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + + L ++ S D G S+ + EL
Sbjct: 290 IVEDMIDGLNHYLDEKGLQSASDLIGKSVPKYKNWGEL 327
>gi|385208831|ref|ZP_10035699.1| dihydroorotate dehydrogenase family protein [Burkholderia sp.
Ch1-1]
gi|385181169|gb|EIF30445.1| dihydroorotate dehydrogenase family protein [Burkholderia sp.
Ch1-1]
Length = 444
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ LKE Q+K +PD+ +I S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLKEIAQVKRDWPDRAMIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRLGSRAAYKGGADGVSLINTINSIVAVDLDAMSPLPMVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ + +SGIGG+ + DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDVET----PNLPISGIGGISSWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M +++++D G ++ T + L + I Q K ++ GL
Sbjct: 293 IVSDLADGLSNWMDEKGYATLDDICGRAVPNVTDWKYLNLKYDIKARIDQDKCIQCGL 350
>gi|254510639|ref|ZP_05122706.1| dihydropyrimidine dehydrogenase [NADP+] [Rhodobacteraceae bacterium
KLH11]
gi|221534350|gb|EEE37338.1| dihydropyrimidine dehydrogenase [NADP+] [Rhodobacteraceae bacterium
KLH11]
Length = 434
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 209/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G+ PNP+ + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTTNFLGISSPNPYWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E ++KA YPD+ LIAS+M + A
Sbjct: 63 -----GAIYGADRRLLGLNNIELITDRPLEINLEEMARVKADYPDRALIASLMVPCEEDA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ RV ETG D IE+NF CPHGM ER MG+AVGQ +E V W PV K
Sbjct: 118 WKAILPRVAETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVTRWCKQYYDRPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PA A G++ VS INTI S+ ++L T PEP ++G + GGY AV
Sbjct: 178 LTPNITDIRKPAAAARNGGADAVSLINTINSITSVNLDTFSPEPSIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGGV T DAAEFI LG TVQVCT M +G+
Sbjct: 238 KPIALSMVSEIARAEATH----GLPISGIGGVTTWRDAAEFISLGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
++ L L ++M +SS+++ G ++ T + L + + I Q + ++ G
Sbjct: 294 KIIDELTAGLSEWMDEKGYSSVDEVVGRAVPNVTDWQYLNLNYVAKAKIDQDQCIKCG 351
>gi|149201032|ref|ZP_01878007.1| dihydropyrimidine dehydrogenase [Roseovarius sp. TM1035]
gi|149145365|gb|EDM33391.1| dihydropyrimidine dehydrogenase [Roseovarius sp. TM1035]
Length = 434
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 201/339 (59%), Gaps = 10/339 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G+ PNPF + S PP ++RAF+ GWG VV KT+ V+NV PRY
Sbjct: 3 DLTTNFIGITSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEAGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E +++K +PD+ LIAS+M N+ A
Sbjct: 63 -----GAIYGADRRLLGLNNIELITDRPLEVNLEEMRRVKRDWPDRALIASLMVPVNEDA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ RVE+TG D +E+NF CPHGM ER MG+AVGQ + +V W + +PV K
Sbjct: 118 WREILHRVEDTGCDGVELNFGCPHGMSERGMGSAVGQVPEYVGQVAHWCKKHSNLPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PA+ A G++ VS INTI S+ +DL PEP ++G GGY AV
Sbjct: 178 LTPNITDIRKPAQAAKDGGADAVSLINTINSITSVDLDLFAPEPTIDGRGAHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGGV T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIALNMVAEIARDPAT----AGLPISGIGGVTTWRDAAEFMALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + L +M F+S++ G ++ +L
Sbjct: 294 KIVQEMISGLSQYMDDKGFTSVDQLVGRAVPNVVNWKDL 332
>gi|15966201|ref|NP_386554.1| dihydropyrimidine dehydrogenase [Sinorhizobium meliloti 1021]
gi|334317207|ref|YP_004549826.1| dihydroorotate dehydrogenase family protein [Sinorhizobium meliloti
AK83]
gi|384530331|ref|YP_005714419.1| dihydroorotate dehydrogenase family protein [Sinorhizobium meliloti
BL225C]
gi|384537030|ref|YP_005721115.1| Dihydropyrimidine dehydrogenase [Sinorhizobium meliloti SM11]
gi|407721506|ref|YP_006841168.1| dihydropyrimidine dehydrogenase [Sinorhizobium meliloti Rm41]
gi|433614270|ref|YP_007191068.1| dihydroorotate dehydrogenase (subfamily 1) family protein
[Sinorhizobium meliloti GR4]
gi|15075471|emb|CAC47027.1| Dihydropyrimidine dehydrogenase [Sinorhizobium meliloti 1021]
gi|333812507|gb|AEG05176.1| dihydroorotate dehydrogenase family protein [Sinorhizobium meliloti
BL225C]
gi|334096201|gb|AEG54212.1| dihydroorotate dehydrogenase family protein [Sinorhizobium meliloti
AK83]
gi|336033922|gb|AEH79854.1| Dihydropyrimidine dehydrogenase [Sinorhizobium meliloti SM11]
gi|407319738|emb|CCM68342.1| dihydropyrimidine dehydrogenase [Sinorhizobium meliloti Rm41]
gi|429552460|gb|AGA07469.1| dihydroorotate dehydrogenase (subfamily 1) family protein
[Sinorhizobium meliloti GR4]
Length = 437
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/360 (43%), Positives = 210/360 (58%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G+ NIELI+DR L L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGFNNIELITDRDLYVNLREMKQVKMNWPDRALIASIMVPCEENA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A G++ VS INTI S+ G++L T PEP ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAKAGGTDAVSLINTINSITGVNLDTFSPEPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGGV T DAAEF+ LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGVTTWRDAAEFMALGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M +++D G ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMITGLSDWMDAKGHRTLDDISGRAVPNVTDWQYLNLNYIAKAKIDQDACIKCG 351
>gi|150397561|ref|YP_001328028.1| dihydropyrimidine dehydrogenase [Sinorhizobium medicae WSM419]
gi|150029076|gb|ABR61193.1| dihydroorotate dehydrogenase family protein [Sinorhizobium medicae
WSM419]
Length = 437
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 208/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYVNLREMKQVKMNWPDRALIASIMVPCEENA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A G++ VS INTI S+ G++L T PEP ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAARAGGTDAVSLINTINSITGVNLDTFSPEPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +SGIGGV T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIALNMVAEIARDTETH----GLPISGIGGVTTWRDAAEFMALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L D+M +++D G ++ T + L + + I Q ++ G
Sbjct: 294 KIVQEMITGLSDWMDAKGHRTLDDISGRAVPNVTDWQYLNLNYITKAKIDQDACIKCG 351
>gi|346992377|ref|ZP_08860449.1| dihydropyrimidine dehydrogenase subunit B [Ruegeria sp. TW15]
Length = 434
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 208/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G+ PNP+ + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLKSNFLGISSPNPYWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E ++KA YPD+ LIASIM +AA
Sbjct: 63 -----GAIYGADRRLLGLNNIELITDRPLEVNLEEMARVKADYPDRALIASIMVPCEEAA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ RV ETG D IE+NF CPHGM ER MG+AVGQ +E V W PV K
Sbjct: 118 WKAILPRVAETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVTRWCKQYYDRPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PA A G++ VS INTI S+ ++L T PEP ++G + GGY AV
Sbjct: 178 LTPNITDIRKPAAAAKNGGADAVSLINTINSITSVNLDTFSPEPSIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + + +SGIGGV T DAAEFI LG VQVCT M +G+
Sbjct: 238 KPIALSMVSEIARAEAT----RGLPISGIGGVTTWRDAAEFISLGCGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
++ L L ++M ++SI+ G ++ T + L + + I Q + ++ G
Sbjct: 294 KIIDELTAGLSEWMDEKGYTSIDQVIGRAVPNVTDWQYLNLNYIAKAKIDQDQCIKCG 351
>gi|421870172|ref|ZP_16301809.1| Dihydropyrimidine dehydrogenase [NADP+] [Burkholderia cenocepacia
H111]
gi|358070779|emb|CCE52687.1| Dihydropyrimidine dehydrogenase [NADP+] [Burkholderia cenocepacia
H111]
Length = 438
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 215/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCTIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDHMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ + + +SGIGG+ + DAAEF++LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIAR----DPETPNLPISGIGGISSWRDAAEFMVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V L + L ++M ++++ D RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVSDLADGLSNWMDEKGYATLGDIRGRAVPNVTDWKYLNLKYDIKARIDQDRCIQCGL 350
>gi|418398726|ref|ZP_12972279.1| dihydropyrimidine dehydrogenase subunit B [Sinorhizobium meliloti
CCNWSX0020]
gi|359507170|gb|EHK79679.1| dihydropyrimidine dehydrogenase subunit B [Sinorhizobium meliloti
CCNWSX0020]
Length = 437
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/360 (43%), Positives = 210/360 (58%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G+ NIELI+DR L L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGFNNIELITDRDLYVNLREMKQVKMNWPDRALIASIMVPCEENA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A G++ VS INTI S+ G++L T PEP ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAKAGGTDAVSLINTINSITGVNLDTFSPEPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGGV T DAAEF+ LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGVTTWRDAAEFMALGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M +++D G ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMITGLSDWMDAKGHRTLDDISGRAVPNVTDWQYLNLNYIAKAKIDQDACIKCG 351
>gi|254466887|ref|ZP_05080298.1| dihydroorotate dehydrogenase family protein [Rhodobacterales
bacterium Y4I]
gi|206687795|gb|EDZ48277.1| dihydroorotate dehydrogenase family protein [Rhodobacterales
bacterium Y4I]
Length = 434
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 212/358 (59%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTTEFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPL+T L+E ++K YPD+ +I SIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRPLQTNLEEITRVKKDYPDRAVIVSIMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W++++ +VE TG D IE+NF CPHGM ER MG+AVGQ ++ V W + PV K
Sbjct: 118 WKDILPQVEATGADGIELNFGCPHGMAERGMGSAVGQVPEYIQMVTEWCKKYYSKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A ++ VS INTI S+ ++L ++ PEP + G T GGY AV
Sbjct: 178 LTPNITDIRHPARAAHAGNADAVSLINTINSITSVNLDSMAPEPTIGGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ + +S IGGV T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIALNMVAEIARDAQT----RGLPISAIGGVTTWRDAAEFMALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+VK + L ++M ++S +DF G ++ T + +L + + I Q ++ G
Sbjct: 294 NVVKEMISGLSNWMDEKGYTSTQDFIGMAVPNVTDWQYLDLNYVTKAKISQDDCIKCG 351
>gi|83944378|ref|ZP_00956833.1| dihydropyrimidine dehydrogenase [Sulfitobacter sp. EE-36]
gi|83953420|ref|ZP_00962142.1| dihydropyrimidine dehydrogenase [Sulfitobacter sp. NAS-14.1]
gi|83842388|gb|EAP81556.1| dihydropyrimidine dehydrogenase [Sulfitobacter sp. NAS-14.1]
gi|83844922|gb|EAP82804.1| dihydropyrimidine dehydrogenase [Sulfitobacter sp. EE-36]
Length = 434
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 201/339 (59%), Gaps = 10/339 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RA++ GWG VV KT+ ++ V+NV PRY
Sbjct: 3 DLRSDFVGIKSPNPFWLASAPPTDKEYNVRRAYEAGWGGVVWKTLGMEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K +K YPD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRPLEVNLREMKAVKRDYPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPHVEETGADGIELNFGCPHGMAERGMGSAVGQVPEYIEMVTRWCKQYTRMPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNIT++ PA A R G++ VS INTI S+ +DL PEP ++G T GGY AV
Sbjct: 178 LTPNITNVLYPAEAAKRGGADAVSLINTINSITSVDLDLFAPEPMIDGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ D +SGIGGV T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIALNMVAEIARNPET----ADMPISGIGGVTTWRDAAEFLALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + L ++M +S++ ++ T +L
Sbjct: 294 KVVQEMISGLSEYMDDKGMTSVDQLVRRAVPNVTDWNQL 332
>gi|389874613|ref|YP_006373969.1| dihydroorotate dehydrogenase family protein [Tistrella mobilis
KA081020-065]
gi|388531793|gb|AFK56987.1| dihydroorotate dehydrogenase family protein [Tistrella mobilis
KA081020-065]
Length = 434
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 215/359 (59%), Gaps = 14/359 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS + G++ PNPF + S PP + RAF+ GWG VV KT+ +D V+NV+ RY
Sbjct: 3 DLSCDIAGIRSPNPFWLASAPPTDKEYNVVRAFEAGWGGVVWKTLGIDP-PVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ I G NIELI+DRPL L+E ++K +PD+ ++ S+M N+A
Sbjct: 62 AV------SYNGQRIAGLNNIELITDRPLAVNLEEIARVKRNWPDRAVVVSLMVPCNEAD 115
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W ++ VEETG D +E+NF CPHGM ER MGAAVGQ +E V W+ + +P K
Sbjct: 116 WAYILPMVEETGCDGLELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKKHSRLPTIVK 175
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ + AR A G++ VS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 176 LTPNITDVRQSARAAKNGGADAVSLINTINSIVTVDLDVMAPTPTVDGKGTHGGYCGPAV 235
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + + +SGIGGV++ DAAEFI LG VQVCT M +G+
Sbjct: 236 KPIALNMVAEIARDAAT----RGLPISGIGGVQSWRDAAEFIALGCGGVQVCTAAMHYGF 291
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL-VRMQQEA-IQQRKAVRKGL 401
+V+ + + L ++M ++ I+DFRG ++ T L ++ +A I Q K ++ GL
Sbjct: 292 RIVRDMIDGLNNWMDEKGYARIDDFRGMAVPNVTDWQFLNLKYDIKARIDQDKCIKCGL 350
>gi|416934822|ref|ZP_11933866.1| dihydropyrimidine dehydrogenase subunit B [Burkholderia sp. TJI49]
gi|325525301|gb|EGD03152.1| dihydropyrimidine dehydrogenase subunit B [Burkholderia sp. TJI49]
Length = 438
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL ++ G+ PNPF + S PP + RAF+ GWG VV KT+ LD V+NV+ RY
Sbjct: 3 DLRCSIAGITSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGLDP-HVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ NG +I G NIELI+DRPL+ L+E Q+K +PD+ LI S+M N+ W
Sbjct: 62 AVQW--NGQ---RIAGLNNIELITDRPLDVNLREIAQVKRDWPDRALIVSLMVPCNERDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE+TG DA+E+NF CPHGM ER MGAAVGQ +E V W+ +P K+
Sbjct: 117 KWILPLVEDTGADAVELNFGCPHGMSERGMGAAVGQVPEYVEMVTRWVKEGTKLPCLVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI+DI +R A + G++GVS INTI S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNISDIRMGSRAAYKGGADGVSLINTINSIVAVDLDHMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + +SGIGG+ DAAEFI+LGA +VQVCT M +G+
Sbjct: 237 PIALNMVAEIARDPET----PNLPISGIGGISNWRDAAEFIVLGAGSVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKGL 401
+V + + L ++M +++++D RG ++ T + L + I Q + ++ GL
Sbjct: 293 IVSDMVDGLSNWMDDKGYATLDDVRGRAVPNVTDWKYLNLQYDIKARIDQDRCIQCGL 350
>gi|126734202|ref|ZP_01749949.1| dihydroorotate dehydrogenase family protein, putative [Roseobacter
sp. CCS2]
gi|126717068|gb|EBA13932.1| dihydroorotate dehydrogenase family protein, putative [Roseobacter
sp. CCS2]
Length = 434
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 211/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTTDFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E ++KA YPD+ +I SIM + A
Sbjct: 63 -----GAIYGADRRLLGLNNIELITDRPLEVNLEEITRVKADYPDRAMIVSIMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W++++ RV TG D IE+NF CPHGM ER MGAAVGQ +E V W PV K
Sbjct: 118 WKDILPRVAATGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWCKQYYDKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PA A+R G++ VS INTI S+ ++L T+ PEP ++G + GGY AV
Sbjct: 178 LTPNITDVRKPAAAAMRGGADAVSLINTINSITSVNLDTMSPEPSIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V IA+ ++ +SGIGGV T DAAEFI LG VQVCT M +G+
Sbjct: 238 KPIAMSMVSEIARNPETH----GLPISGIGGVTTWRDAAEFISLGCGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L +M ++S+E+ G ++ T + L + + I Q ++ G
Sbjct: 294 KIVEEMKSGLSQWMDEKGYTSVEEVIGRAVPNVTDWQYLNLNYVAKAKINQDDCIKCG 351
>gi|260575576|ref|ZP_05843574.1| dihydroorotate dehydrogenase family protein [Rhodobacter sp. SW2]
gi|259022219|gb|EEW25517.1| dihydroorotate dehydrogenase family protein [Rhodobacter sp. SW2]
Length = 432
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 212/358 (59%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
+L+ T G++ PNPF + S PP ++RAF+ GWG VV KT+ LD V+NV+ PRY
Sbjct: 3 NLASTFIGIKSPNPFWLASAPPTDKAYNVERAFEAGWGGVVWKTLGLDGPPVVNVSGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPL+ L E K +K + D+ L+ S+M ++ +
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRPLQVNLDEIKAVKRKWRDRALVISLMVPCDEES 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ R+E+T D +E+NF CPHGM ER MG+AVGQ +E V W+ + +P K
Sbjct: 118 WKGILARIEDTEADGVELNFGCPHGMAERGMGSAVGQVPEYIEMVTRWVKQHSRMPCIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNI+DI +PA A R G++ VS INTI S+ ++L PEP ++G T GGY AV
Sbjct: 178 LTPNISDIRKPAEAAKRGGADAVSLINTINSITSVNLDDFAPEPMIDGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + + +SGIGGV T DAAEF+ LGA VQVCT VM +G+
Sbjct: 238 KPIALNMVAEIARHPAT----RGLPISGIGGVSTWRDAAEFMALGAGNVQVCTAVMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V + L D+M F+S++D G ++ T L + + I Q ++ G
Sbjct: 294 KIVSEMISGLSDYMDRKGFASVDDLVGRAVPNVTDWQFLNLNYVTKAQIDQTSCIKCG 351
>gi|160898303|ref|YP_001563885.1| dihydropyrimidine dehydrogenase [Delftia acidovorans SPH-1]
gi|160363887|gb|ABX35500.1| dihydroorotate dehydrogenase family protein [Delftia acidovorans
SPH-1]
Length = 439
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 212/358 (59%), Gaps = 13/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+S G+ PNPF + S PP + RAF+ GWG VV KT+ D V+NV PRY
Sbjct: 3 DISSRFLGISSPNPFWLASAPPTDKEINVTRAFEAGWGGVVWKTLGEDP-HVVNVNGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ L A +++G NIELI+DRPL T L+E ++K +PD+ LIAS+M + +
Sbjct: 62 STLMA-----QDRRVMGLNNIELITDRPLRTNLEEMTRVKKAWPDRALIASLMVPCVEES 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VE+TG D +E+NF CPHGM ER MGAAVGQ ++ V W + +PV K
Sbjct: 117 WKRILPMVEDTGADGLELNFGCPHGMSERGMGAAVGQVPEYIQMVTQWCKQYSRLPVIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ PAR A G++ VS INTI S+MG++L TL P +G + GGY AV
Sbjct: 177 LTPNITDVRFPARAAKAGGADAVSLINTINSLMGVNLDTLVMHPSTDGQGSHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA V IA+ + +SGIGG+ T DAAE+I LG VQVCT M++G+
Sbjct: 237 KPIAQNMVAEIAR----DPQTAGLPISGIGGITTWKDAAEYIALGCGNVQVCTAAMVYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTE--LVRMQQEAIQQRKAVRKG 400
+V+ +C+ L ++M H F+ IEDF+G ++ + L +++ I Q ++ G
Sbjct: 293 RIVQDMCDGLSNYMDAHGFARIEDFQGRAVPTVRDWKDLNLNHIEKAVINQDSCIQCG 350
>gi|409400438|ref|ZP_11250508.1| dihydropyrimidine dehydrogenase subunit B [Acidocella sp. MX-AZ02]
gi|409130566|gb|EKN00322.1| dihydropyrimidine dehydrogenase subunit B [Acidocella sp. MX-AZ02]
Length = 423
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/338 (43%), Positives = 203/338 (60%), Gaps = 12/338 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL I G++ PNPF + S PP ++RAF GWG VV KT+ D V+NV+ RY
Sbjct: 3 DLHIDFAGIKAPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEDP-PVVNVSSRY- 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
GA G +++G NIELI+DRPL L E + +K +PD+ ++ S+M + +W
Sbjct: 61 ----GAIGYNGQRLMGMNNIELITDRPLHLNLDEIRTVKRNWPDRAVVVSLMVPCEEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGM ER MGAAVGQ +E V W + +PV K+
Sbjct: 117 KRILPLVEATGADGIELNFGCPHGMSERGMGAAVGQVPDYVEMVTRWCKQYSRMPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI +PA A R G++ VS INTI S+ G+DL + PEP V+G T GGY AV
Sbjct: 177 TPNITDILKPAEAARRGGADAVSLINTITSITGVDLDNMVPEPAVDGLGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +K +SGIGG+ + DAAEF+ LGA +VQVCT M +G+
Sbjct: 237 PIALRMVGEIARSLKG------LPISGIGGISSWRDAAEFLALGAGSVQVCTAAMHYGFR 290
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + L ++M ++ IED G +++ F +L
Sbjct: 291 IVEDMISGLSNWMDEKGYACIEDVTGRAVKNFVHWNDL 328
>gi|104782302|ref|YP_608800.1| dihydropyrimidine dehydrogenase [Pseudomonas entomophila L48]
gi|95111289|emb|CAK16009.1| putative dihydroorotate dehydrogenase, FMN-linked, 4Fe-4S
ferredoxin-type protein [Pseudomonas entomophila L48]
Length = 424
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 208/348 (59%), Gaps = 11/348 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A Q+ G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANRQVQGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W ++PV K+
Sbjct: 117 KFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTHCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVGDQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ + + + GIGG+ T DAAEFI LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIAR----DPETRGLPICGIGGIGTWRDAAEFIALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQ 393
+V + + L +M H ++++ FRG ++ + TT + + M +++ Q
Sbjct: 293 IVDDMKDGLARWMDQHGHANLDAFRGQAVGH-TTDWKYLDMNYKSVAQ 339
>gi|347759614|ref|YP_004867175.1| dihydropyrimidine dehydrogenase [Gluconacetobacter xylinus NBRC
3288]
gi|347578584|dbj|BAK82805.1| dihydropyrimidine dehydrogenase [Gluconacetobacter xylinus NBRC
3288]
Length = 424
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 214/358 (59%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL G++ PNPF + S PP ++RAF+ GWG VV KT+ D V+NV+ RY
Sbjct: 3 DLRTNFVGIRSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEDP-PVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L NG+ ++IG NIELISDRPL T + E K +K YPD+ ++ S+M + +W
Sbjct: 62 SLNY--NGT---RMIGLNNIELISDRPLATNIAEIKSVKRDYPDRAVVVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ +E V W +PV K+
Sbjct: 117 KAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTRWCKQNTRMPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT++ PAR A R G++ VS INTI SV+G+DL T+ P P V+G T GGY AV
Sbjct: 177 TPNITNVLMPARAARRGGADAVSLINTIQSVIGVDLDTMAPMPTVDGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + IA+ + +SGIGG+ + DAAEF+ +GA T+QVCT M +G+
Sbjct: 237 PIALRMIGDIAR----DPEMAGLPISGIGGIGSWRDAAEFLAMGATTLQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL-VRMQQEA-IQQRKAVRKGL 401
+V+ + + L +M +++I D G ++E F +L ++ A I Q ++ GL
Sbjct: 293 IVEDMTDGLSAWMDQKGYATINDVTGRAVERFVPWNQLNMKFNTIARIDQDACIKCGL 350
>gi|121606904|ref|YP_984233.1| dihydropyrimidine dehydrogenase [Polaromonas naphthalenivorans CJ2]
gi|120595873|gb|ABM39312.1| dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine
dehydrogenase (NADP+) [Polaromonas naphthalenivorans
CJ2]
Length = 435
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 204/339 (60%), Gaps = 10/339 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
+L G+ PNPF + S PP + RAF+ GWG VV KT++ ++NV PRY
Sbjct: 3 NLQTNFIGIHSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLAEAGPTLVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA S +++G+ NIELI+DR LE L E Q+K +P++ L+ S+M N+AA
Sbjct: 63 -----GALLSPDRRLLGFNNIELITDRDLEINLAEIIQVKRDWPERALVVSLMVPCNEAA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ RVE+TG D +E+NF CPHGM ER MG+AVGQ +E V W + +PV K
Sbjct: 118 WKSILARVEDTGADGLELNFGCPHGMSERGMGSAVGQVPEYIEMVTQWCKHYSRLPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A R G++ VS INTI S+MG+D +L P G + GGY AV
Sbjct: 178 LTPNITDIRIPARAARRGGADAVSLINTINSIMGVDPYSLTMLPSTGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGGV + DA ++I LGA TVQVCT M+HG+
Sbjct: 238 KPIALNMVAEIAR----DPQTAGLPISGIGGVGSWRDALDYIALGAGTVQVCTAAMVHGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + L D+M F+SI+DFRG ++ +EL
Sbjct: 294 KIVQEMKSGLSDYMDEMGFASIDDFRGRALPTVANWSEL 332
>gi|333915496|ref|YP_004489228.1| dihydroorotate dehydrogenase family protein [Delftia sp. Cs1-4]
gi|154705703|gb|ABS84237.1| putative dihydropyrimidine dehydrogenase [Delftia sp. I24]
gi|333745696|gb|AEF90873.1| dihydroorotate dehydrogenase family protein [Delftia sp. Cs1-4]
Length = 439
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/330 (43%), Positives = 203/330 (61%), Gaps = 11/330 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+S G+ PNPF + S PP + RAF+ GWG VV KT+ D V+NV PRY
Sbjct: 3 DISSRFLGISSPNPFWLASAPPTDKEINVTRAFEAGWGGVVWKTLGEDP-HVVNVNGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ L A +++G NIELI+DRPL T L+E ++K +PD+ LIAS+M + +
Sbjct: 62 STLMA-----QDRRVMGLNNIELITDRPLRTNLEEMTRVKKAWPDRALIASLMVPCVEES 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VE+TG D +E+NF CPHGM ER MGAAVGQ ++ V W + +PV K
Sbjct: 117 WKRILPMVEDTGADGLELNFGCPHGMSERGMGAAVGQVPEYIQMVTQWCKQYSRLPVIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ PAR A G++ VS INTI S+MG++L TL P +G + GGY AV
Sbjct: 177 LTPNITDVRFPARAAKAGGADAVSLINTINSLMGVNLDTLVMHPSTDGQGSHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA V IA+ ++ +SGIGG+ T DAAE+I LG VQVCT M++G+
Sbjct: 237 KPIAQNMVAEIARDPQT----AGLPISGIGGITTWKDAAEYIALGCGNVQVCTAAMVYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+V+ +C+ L ++M H F+ IEDF+G ++
Sbjct: 293 RIVQDMCDGLSNYMDAHGFARIEDFQGRAV 322
>gi|325273455|ref|ZP_08139703.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas sp. TJI-51]
gi|324101411|gb|EGB99009.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas sp. TJI-51]
Length = 424
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 150/333 (45%), Positives = 200/333 (60%), Gaps = 10/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIMFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A Q+ G NIELI+DR LE L+E Q+K +PD+ LI S+M +A+W
Sbjct: 62 -----AHYGANRQVQGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCEEASW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W ++PV K+
Sbjct: 117 KFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKQHCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVGDQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ + + GIGG+ DAAEF+ LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPATH----GLPICGIGGIGNWRDAAEFMALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +M H ++IE FRG ++ + T
Sbjct: 293 IVEDMKDGLARWMDQHGHANIEAFRGQAVGHTT 325
>gi|349687117|ref|ZP_08898259.1| dihydropyrimidine dehydrogenase subunit B [Gluconacetobacter
oboediens 174Bp2]
Length = 424
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 214/358 (59%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL G++ PNPF + S PP ++RAF+ GWG VV KT+ D V+NV+ RY
Sbjct: 3 DLRTNFVGIRSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEDP-PVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L NG+ ++IG NIELISDRPL T + E K +K YPD+ ++ S+M + +W
Sbjct: 62 SL--DYNGT---RMIGLNNIELISDRPLATNIAEIKSVKRDYPDRAVVVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ +E V W +PV K+
Sbjct: 117 KAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTRWCKQNTRMPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT+I PAR ALR G++ VS INT+ SV+G+DL + P P V+G T GGY AV
Sbjct: 177 TPNITNILMPARAALRGGADAVSLINTVQSVIGVDLDLMAPMPVVDGQGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + IA+ + +SGIGG+ + DAAEF+ +GA T+QVCT M +G+
Sbjct: 237 PIALRMIGDIAR----DPELARLPISGIGGIGSWRDAAEFLAMGATTLQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL-VRMQQEA-IQQRKAVRKGL 401
+V+ + + L +M +++I D G ++E F L ++ + A I Q ++ GL
Sbjct: 293 IVEDMTDGLSAWMDQKGYATIADVTGRAVERFVPWNRLNMKFKTIAKIDQDACIKCGL 350
>gi|407774046|ref|ZP_11121345.1| dihydropyrimidine dehydrogenase subunit B [Thalassospira
profundimaris WP0211]
gi|407282705|gb|EKF08262.1| dihydropyrimidine dehydrogenase subunit B [Thalassospira
profundimaris WP0211]
Length = 425
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 138/338 (40%), Positives = 208/338 (61%), Gaps = 10/338 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS + G+ NPF + S PP + RAF+ GWG VV KT+ +D V+NV+ RY
Sbjct: 3 DLSCKIAGIDSLNPFWLASAPPTDKKYNVVRAFEAGWGGVVWKTLGIDP-PVVNVSSRY- 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
GA+ +++G NIELISDRPL T L+E ++ + YPD ++I S+M + AW
Sbjct: 61 ----GAHHDQNRRLLGINNIELISDRPLATNLQEIRECRKEYPDHVIIGSMMAPIEERAW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
++L ++ E+G+ +E+N CPHGM ER MG+A+GQ ++E+V W+ +PV+ K+
Sbjct: 117 KDLAQQIAESGVHGLELNLGCPHGMCERGMGSAIGQVPEMVEQVTRWVKDAVDIPVFTKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT+I A AL+ G++ VS INT+ S++ +D+ + PEP V+G T GGY AV
Sbjct: 177 TPNITNILWSAEAALKGGADAVSLINTVNSIVSVDIDNMIPEPVVDGKGTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ +D +SGIGG+ T DA EF+ LG+N VQVCT M++G+
Sbjct: 237 PIALNMVAEIARTPET----RDLEISGIGGITTWKDAVEFMALGSNAVQVCTAAMIYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V L + + +M ++S+E F A++ + EL
Sbjct: 293 VVDDLIDGMSQWMDDKGYTSVEQFTRAAVPQVSDWNEL 330
>gi|417099681|ref|ZP_11959876.1| dihydropyrimidine dehydrogenase protein [Rhizobium etli CNPAF512]
gi|327192567|gb|EGE59517.1| dihydropyrimidine dehydrogenase protein [Rhizobium etli CNPAF512]
Length = 437
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/360 (43%), Positives = 208/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYTNLREMKQVKMNWPDRALIASIMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKSILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A GS+ VS INTI S++ +DL P P V G + GGY AV
Sbjct: 178 LTPNITDIRRPARAAKAGGSDAVSLINTINSIVSVDLDNFAPNPTVGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEF++LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGITTWRDAAEFLVLGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M +++D G +++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMITGLSDWMDEKGHKTLDDITGRAVQNVTDWQYLNLNYIAKAKIDQDACIKCG 351
>gi|254475131|ref|ZP_05088517.1| dihydroorotate dehydrogenase family protein [Ruegeria sp. R11]
gi|214029374|gb|EEB70209.1| dihydroorotate dehydrogenase family protein [Ruegeria sp. R11]
Length = 434
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 208/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTADFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E ++K YPD+ +I SIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRPLEVNLEEITRVKKDYPDRAIIVSIMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W++++ RVE TG D IE+NF CPHGM ER MG+AVGQ ++ V W + PV K
Sbjct: 118 WKDILPRVEATGADGIELNFGCPHGMAERGMGSAVGQVPEYIQMVTEWCKKYYSKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A G++ VS INTI S++ +DL + PEP + T GGY AV
Sbjct: 178 LTPNITDIRHPARAAKAGGADAVSLINTINSIVSVDLDAMAPEPTIGDKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +S IGGV T DAAEF+ +GA VQVCT M +G+
Sbjct: 238 KPIALNMVAEIARCPQTH----GLPISAIGGVTTWRDAAEFMTMGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+VK + L +M + +++DF G ++ T + L + + I Q ++ G
Sbjct: 294 NVVKEMISGLNQWMDDKGYKTLDDFVGKAVPNVTDWQYLNLNYVAKAKISQDDCIKCG 351
>gi|260434049|ref|ZP_05788020.1| dihydroorotate dehydrogenase family protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260417877|gb|EEX11136.1| dihydroorotate dehydrogenase family protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 434
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 208/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNP+ + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLKTNFLGIESPNPYWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E ++KA YPD+ LIASIM + A
Sbjct: 63 -----GAIYGADRRLVGLNNIELITDRPLEVNLEEMARVKADYPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ RV ETG D IE+NF CPHGM ER MG+AVGQ +E V W PV K
Sbjct: 118 WKAILPRVAETGADGIELNFGCPHGMSERGMGSAVGQVPDYIEMVTRWCKKYYDRPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PA A G++ VS INTI S+ ++L T PEP ++G + GGY AV
Sbjct: 178 LTPNITDIRKPAAAARNGGADAVSLINTINSITSVNLDTFSPEPSIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +SGIGGV T DAAEF+ LG TVQVCT M +G+
Sbjct: 238 KPIALSMVSEIARAEATQ----GLPISGIGGVTTWRDAAEFMALGCGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
++ L L +M +S++ + G ++ T + L + + I Q + ++ G
Sbjct: 294 KIIDELTAGLSQWMDEKGYSNVPEIVGRAVPNVTDWQYLNLNYVAKAKIDQDQCIKCG 351
>gi|118592955|ref|ZP_01550343.1| dihydropyrimidine dehydrogenase [Stappia aggregata IAM 12614]
gi|118434489|gb|EAV41142.1| dihydropyrimidine dehydrogenase [Stappia aggregata IAM 12614]
Length = 437
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 147/330 (44%), Positives = 201/330 (60%), Gaps = 11/330 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP + RAF GWG VV KT+ D A V+NV PRY
Sbjct: 3 DLRTDFIGIKSPNPFWLASAPPTDKEYNVVRAFKAGWGGVVWKTLGEDPA-VVNVNGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA Q+IG NIELI+DRPLE L+E KQ+K +PD+ L+ S+M +
Sbjct: 62 -----GAIHGKDRQLIGLNNIELITDRPLEVNLREIKQVKRDWPDRALVVSLMVPCEEQN 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W +++ +VEET D +E+NF CPHGM ER MG+AVGQ +E V W+ + +P K
Sbjct: 117 WIDILKKVEETEADGVELNFGCPHGMSERGMGSAVGQVPEYIEMVTRWVKQHSRMPCIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PA+ A G++ VS INTI S+MG+DL + P P V+G GGY AV
Sbjct: 177 LTPNITDVRKPAQAAKAGGADAVSLINTINSIMGVDLDIMSPSPSVDGKGAHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGGV T DAAEF+ LGA +VQVCT M +G+
Sbjct: 237 KPIALNMVAEIARDPATH----GLPISGIGGVTTWRDAAEFMALGAGSVQVCTAAMTYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+V+ + E L D+M ++S++ F G+++
Sbjct: 293 RVVEDMIEGLSDWMDTKGYTSVDQFVGSAV 322
>gi|399036977|ref|ZP_10733915.1| dihydroorotate dehydrogenase family protein [Rhizobium sp. CF122]
gi|398065437|gb|EJL57070.1| dihydroorotate dehydrogenase family protein [Rhizobium sp. CF122]
Length = 437
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 210/360 (58%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYTNLREMKQVKMNWPDRALIASIMVPCEENA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A G++ VS INTI S+ ++L T PEP ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAKAGGTDAVSLINTINSITAVNLDTFSPEPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGGV T DAAEF++LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGVTTWRDAAEFLVLGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M +++D G ++ + + L + + I Q ++ G
Sbjct: 292 GFKIVQEMITGLSDWMDAKGHRNLDDITGRAVPNVSDWQYLNLNYIAKAKIDQDACIKCG 351
>gi|126741278|ref|ZP_01756957.1| dihydropyrimidine dehydrogenase [Roseobacter sp. SK209-2-6]
gi|126717683|gb|EBA14406.1| dihydropyrimidine dehydrogenase [Roseobacter sp. SK209-2-6]
Length = 404
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 211/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTTEFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR LET L+E ++K YPD+ +I SIM + A
Sbjct: 63 -----GAIFGADRRLLGLNNIELITDRSLETNLEEITRVKKDYPDRAVIVSIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ +VE TG D IE+NF CPHGM ER MG+AVGQ ++ V W + PV K
Sbjct: 118 WKAILPKVEATGADGIELNFGCPHGMAERGMGSAVGQVPEYIQMVTEWCKKYYSKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ PAR A G + VS INTI S++ +DL ++ PEP V G T GGY AV
Sbjct: 178 LTPNITDVRFPARAAKAGGGDAVSLINTINSIVSVDLDSMAPEPTVGGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +S IGGV T DAAEF+++GA VQVCT M +G+
Sbjct: 238 KPIALNMVAEIARCPQTH----GLPISAIGGVTTWKDAAEFMVMGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+VK + L ++M ++S +DF G ++ T + +L + + I Q ++ G
Sbjct: 294 NVVKEMISGLSNWMDEKGYTSTQDFIGQAVPNVTDWQYLDLNFVAKAKINQDDCIKCG 351
>gi|409437961|ref|ZP_11265060.1| putative FMN-linked oxidoreductase; dihydropyrimidine/dihydroorate
dehydrogenase [Rhizobium mesoamericanum STM3625]
gi|408750427|emb|CCM76220.1| putative FMN-linked oxidoreductase; dihydropyrimidine/dihydroorate
dehydrogenase [Rhizobium mesoamericanum STM3625]
Length = 437
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 155/360 (43%), Positives = 209/360 (58%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIFGADRRLLGLNNIELITDRDLYTNLREMKQVKMNWPDRALIASIMVPCEENA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A G++ VS INTI S+ ++L T PEP ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAKAGGTDAVSLINTINSITSVNLDTFSPEPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGGV T DAAEF+ LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGVTTWRDAAEFLALGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M S++D G ++ + + L + + I Q ++ G
Sbjct: 292 GFKIVQEMITGLSDWMDAKGHRSLDDITGRAVPNVSDWQYLNLNYIAKAKIDQDACIKCG 351
>gi|162147298|ref|YP_001601759.1| dihydropyrimidine dehydrogenase [Gluconacetobacter diazotrophicus
PAl 5]
gi|161785875|emb|CAP55446.1| Dihydroorotate dehydrogenase [Gluconacetobacter diazotrophicus PAl
5]
Length = 426
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 208/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G++ PNPF + S PP ++R + GWG VV KT+ D V+NV+ RY
Sbjct: 3 DLRSTLAGIRSPNPFWLASAPPTDKEYNVRRGLEAGWGGVVWKTLGEDP-PVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
N +++G NIELISDRPL L E K +K YPD+ ++ S+M + +W
Sbjct: 62 AFNYNGN-----RLVGLNNIELISDRPLAVNLAEIKSVKRDYPDRAIVVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
++ VE+TG D IE+NF CPHGM ER MG+AVGQ +E V W+ +P K+
Sbjct: 117 RRILPLVEDTGADGIELNFGCPHGMSERNMGSAVGQVPDYVEMVTRWVKQNTRMPTIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT+I PAR ALR G++ VS INTI SV+ +DL + P P V+G T GGY AV
Sbjct: 177 TPNITNILVPARAALRGGADAVSLINTIQSVVAVDLDAMAPMPVVDGLGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ + +SGIGG+ T DAAEF+++GA VQVCT M HG+
Sbjct: 237 PIALRMVGEIAR----SPDMSGLPISGIGGISTWRDAAEFLVMGATNVQVCTAAMHHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL-VRMQQEA-IQQRKAVRKGL 401
+V+ + + L ++M F+++ D G ++ F +L + + A I Q ++ GL
Sbjct: 293 IVEDMIDGLSNWMDQKGFAALSDVIGRAVPNFVNWNQLNLNFRTIAKIDQESCIQCGL 350
>gi|326315758|ref|YP_004233430.1| dihydroorotate dehydrogenase family protein [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323372594|gb|ADX44863.1| dihydroorotate dehydrogenase family protein [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 449
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 152/351 (43%), Positives = 211/351 (60%), Gaps = 13/351 (3%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRYARLRAGA 111
G++ PNPF + S PP + RAF+ GWG VV KT+ D V+NV PRY+ L
Sbjct: 10 GIRSPNPFWLASAPPTDKEVNVTRAFEAGWGGVVWKTLGEDP-HVVNVNGPRYSTLM--- 65
Query: 112 NGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDR 171
S ++IG NIELI+DRPL L+E +++K +PD+ +I SIM + +W+ ++
Sbjct: 66 --SQDRRVIGLNNIELITDRPLAVNLEEIRRVKRAWPDRAMIVSIMVPCVEESWKRILPM 123
Query: 172 VEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITD 231
VE+TG D IE+NF CPHGM ER MGAAVGQ ++ V W +PV K+TPNITD
Sbjct: 124 VEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIQMVTQWCKHYTHLPVIVKLTPNITD 183
Query: 232 ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGK 291
+ +PAR A G++ VS INTI S+MG+DL+ + P G+ + GGY AV PIAL
Sbjct: 184 VRQPARAARAGGADAVSLINTINSIMGVDLERMAMSPHTGGWGSHGGYCGPAVKPIALNM 243
Query: 292 VMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351
V IA+ ++ +SGIGGV T DAAEFI LG TVQVCT M++G+ +V+ +C
Sbjct: 244 VAEIARDAQT----AGLPISGIGGVSTWRDAAEFIALGCGTVQVCTAAMVYGFKIVQDMC 299
Query: 352 EELKDFMKMHNFSSIEDFRGASIEYFTTHTE--LVRMQQEAIQQRKAVRKG 400
+ L +FM H + +IEDFRG ++ E L + + I Q ++ G
Sbjct: 300 DGLSNFMDAHGYRTIEDFRGGAVPTVKDWKELDLNHVDKAVINQDACIQCG 350
>gi|86137294|ref|ZP_01055871.1| dihydropyrimidine dehydrogenase [Roseobacter sp. MED193]
gi|85825629|gb|EAQ45827.1| dihydropyrimidine dehydrogenase [Roseobacter sp. MED193]
Length = 434
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 208/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTTEFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR LE L+E ++K YPD+ +I SIM + A
Sbjct: 63 -----GAIFGADRRLLGLNNIELITDRSLEINLEEITRVKKDYPDRAVIVSIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ +VE TG D IE+NF CPHGM ER MGAAVGQ ++ V W + PV K
Sbjct: 118 WKAILPKVEATGADGIELNFGCPHGMAERGMGAAVGQVPEYIQMVTEWCKKYYSKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ PAR A G + VS INTI S++ +DL + PEP V G T GGY AV
Sbjct: 178 LTPNITDVRFPARAAKAGGGDAVSLINTINSIVSVDLDQMAPEPTVGGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V IA+ ++ D +S IGGV T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIAMNMVAEIARCPETH----DLPISAIGGVTTWKDAAEFMALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+VK + L ++M ++S +DF G ++ T + +L + + I Q + G
Sbjct: 294 NVVKEMISGLSNWMDEKGYTSTQDFIGMAVPNVTDWQYLDLNYIAKAKINQDDCISCG 351
>gi|115373492|ref|ZP_01460789.1| dihydropyrimidine dehydrogenase (NADP+) [Stigmatella aurantiaca
DW4/3-1]
gi|310825270|ref|YP_003957628.1| dihydropyrimidine dehydrogenase [Stigmatella aurantiaca DW4/3-1]
gi|115369498|gb|EAU68436.1| dihydropyrimidine dehydrogenase (NADP+) [Stigmatella aurantiaca
DW4/3-1]
gi|309398342|gb|ADO75801.1| Dihydropyrimidine dehydrogenase [Stigmatella aurantiaca DW4/3-1]
Length = 462
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 147/338 (43%), Positives = 201/338 (59%), Gaps = 13/338 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAFD GWG V KT+ ++NVT R+
Sbjct: 3 DLSIEFCGIRSPNPFWLASAPPTNTGDQVMRAFDAGWGGAVWKTL---GNPIVNVTSRFG 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ G +++G NIELI+DRPLE +E ++K +P L+AS+M E K W
Sbjct: 60 GIDYGNT-----RLMGLNNIELITDRPLEVNFREMLEVKKRFPKHTLVASLMVE-TKEEW 113
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+I R E+ G D +E+NF CPHGM ER MG+AVG + ++LEE+ W A VPV K+
Sbjct: 114 REIIQRSEDAGADLLELNFGCPHGMCERGMGSAVGAEPKVLEEIARWAVEFARVPVIVKL 173
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+ DI EP A+R+G +S INT+ S+MG+DL + P P V ST GGY AV
Sbjct: 174 TPNVGDILEPGEAAVRAGVPALSLINTVKSIMGVDLDRMVPLPRVGDASTNGGYCGPAVK 233
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +A+ + ++SGIGG+ DAAEFI LGA +VQVCT VM HG+
Sbjct: 234 PIALHLLSQLARHPQC----GRLAISGIGGISNWRDAAEFIALGATSVQVCTAVMHHGFR 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + E L DF+ SS+ + RG ++ F EL
Sbjct: 290 IVEDMLEGLSDFLDEKGMSSVAELRGRAVPAFRDWGEL 327
>gi|116253448|ref|YP_769286.1| dihydropyrimidine dehydrogenase [Rhizobium leguminosarum bv. viciae
3841]
gi|115258096|emb|CAK09197.1| putative dihydropyrimidine dehydrogenase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 437
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 155/360 (43%), Positives = 207/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYTNLREMKQVKMNWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ PAR A G++ VS INTI S++ +DL P P V G + GGY AV
Sbjct: 178 LTPNITDVRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEF++LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGITTWRDAAEFLVLGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M S+ED G ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMITGLSDWMDEKGHRSLEDITGRAVPNVTDWQYLNLNYIAKAKIDQDACIKCG 351
>gi|407771135|ref|ZP_11118497.1| dihydropyrimidine dehydrogenase subunit B [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407285854|gb|EKF11348.1| dihydropyrimidine dehydrogenase subunit B [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 425
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 138/338 (40%), Positives = 206/338 (60%), Gaps = 10/338 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS + G+ NPF + S PP + RAF+ GWG VV KT+ +D V+NV+ RY
Sbjct: 3 DLSCKIAGINSLNPFWLASAPPTDKKYNVVRAFEAGWGGVVWKTLGIDP-PVVNVSSRY- 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
GA+ +++G NIELISDRPL L+E ++ + YPD ++I S+M + AW
Sbjct: 61 ----GAHHDQNRRLLGINNIELISDRPLSVNLQEIRECRKEYPDHVIIGSMMAPIEERAW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
++L ++ E+ + IE+N CPHGM ER MG+A+GQ ++E+V W+ +PV+ K+
Sbjct: 117 KDLAQQIAESDVHGIELNLGCPHGMCERGMGSAIGQVPEMVEQVTRWVKDAVDIPVFTKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT+I A AL+ G++ VS INT+ S++ +DL ++ PEP V+G T GGY AV
Sbjct: 177 TPNITNILWSAEAALKGGADAVSLINTVNSIISVDLDSMVPEPMVDGKGTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ +D +SGIGG+ T DA EF+ LG+N VQVCT M++G+
Sbjct: 237 PIALNMVAEIARTPET----RDLHISGIGGITTWKDAVEFMALGSNAVQVCTAAMIYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V L + + +M ++S+E F A++ EL
Sbjct: 293 VVDDLIDGMSQWMDDKGYTSVEQFTRAAVPQVANWNEL 330
>gi|339503847|ref|YP_004691267.1| dihydrooronate dehydrogenase-like protein [Roseobacter litoralis
Och 149]
gi|338757840|gb|AEI94304.1| dihydrooronate dehydrogenase-like protein [Roseobacter litoralis
Och 149]
Length = 434
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 206/358 (57%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G+ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTSEFLGITSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ A +++G NIELI+DR LE L+E ++K YPD+ +I SIM + A
Sbjct: 63 GVIHG-----ADRRVLGMNNIELITDRSLEINLEEITRVKKDYPDRAMIVSIMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W++++ +VE TG D IE+NF CPHGM ER MGAAVGQ +E V W + PV K
Sbjct: 118 WKDILPKVEATGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWCKQYYSKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PA A R G++ VS INTI S++ +DL T+ P P ++G T GGY AV
Sbjct: 178 LTPNITDVRKPAAAAKRGGADAVSLINTINSIVSVDLDTMSPHPSIDGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + + +SGIGGV T DAAE+I +G VQVCT M +G+
Sbjct: 238 KPIALSMVSEIAR----DAETRGMPISGIGGVTTWRDAAEYITMGCGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L +M + I DF GA+I T + L + + I Q + G
Sbjct: 294 KVVQEMISGLSQWMDEKGHTDIRDFMGAAIPNTTDWQYLNLNYIAKAQINQADCISCG 351
>gi|110680292|ref|YP_683299.1| dihydropyrimidine dehydrogenase [Roseobacter denitrificans OCh 114]
gi|109456408|gb|ABG32613.1| dihydroorotate dehydrogenase family protein, putative [Roseobacter
denitrificans OCh 114]
Length = 434
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 207/358 (57%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G+ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTSEFLGITSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ A +++G NIELI+DR LE L+E ++K YPD+ +I SIM + A
Sbjct: 63 GVIHG-----ADRRVLGMNNIELITDRSLEINLEEITRVKKDYPDRAMIVSIMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W++++ RVE TG D IE+NF CPHGM ER MGAAVGQ +E V W + PV K
Sbjct: 118 WKDILPRVEATGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWCKQYYSKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PA A R G++ VS INTI S++ +DL T+ P P ++G T GGY AV
Sbjct: 178 LTPNITDIRKPAAAAKRGGADAVSLINTINSIVSVDLDTMSPYPSIDGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +SGIGGV T DAAE+I +G VQVCT M +G+
Sbjct: 238 KPIALSMVSEIARDPETH----GLPISGIGGVTTWRDAAEYITMGCGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L +M ++I DF GA+I T + L + + I Q + G
Sbjct: 294 KVVQEMISGLSQWMDEKGHTNIRDFMGAAIPNTTDWQYLNLNYVAKAQINQADCISCG 351
>gi|84503342|ref|ZP_01001411.1| dihydropyrimidine dehydrogenase [Oceanicola batsensis HTCC2597]
gi|84388252|gb|EAQ01203.1| dihydropyrimidine dehydrogenase [Oceanicola batsensis HTCC2597]
Length = 434
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 208/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAFD GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTTDFLGIRSPNPFWLASAPPTDKEYNVRRAFDAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPL+T L E ++K YPD+ LIASIM ++ +
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRPLQTNLDEMTRVKKDYPDRALIASIMVPCDEES 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ RV ETG D IE+NF CPHGM ER MG+AVGQ ++ V W PV K
Sbjct: 118 WKAILPRVAETGADGIELNFGCPHGMSERGMGSAVGQVPEYIQMVTEWCKKYYDRPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PA A G++ VS INTI S+ +DL + PEP ++G + GGY AV
Sbjct: 178 LTPNITDIRKPAEAARAGGADAVSLINTINSITHVDLDLMAPEPTIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGGV T DAAEF++LG VQVCT M +G+
Sbjct: 238 KPIALSMVSEIARNQATH----GLPISGIGGVTTWRDAAEFMVLGCGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L +M ++S + F G ++ T + L + + I Q ++ G
Sbjct: 294 KVVQEMISGLSQWMDEKGYTSTDQFIGQAVPNVTDWQYLNLNYVTKARIDQDLCIKCG 351
>gi|407776314|ref|ZP_11123587.1| dihydropyrimidine dehydrogenase subunit B [Nitratireductor
pacificus pht-3B]
gi|407301605|gb|EKF20724.1| dihydropyrimidine dehydrogenase subunit B [Nitratireductor
pacificus pht-3B]
Length = 436
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 209/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+ G++ PNPF + S PP ++RA+ GWG VV KT+ D V+NV PRY
Sbjct: 3 DIRSVFAGIKSPNPFWLASAPPTDKAYNVERAYKAGWGGVVWKTLGEDGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L L+E KQ+K +PD+ L+ S+M + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLHLNLREIKQVKKNWPDRALVVSLMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D +E+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETGADGVELNFGCPHGMSERGMGSAVGQVPDYVEMVVRWCKQTTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A R+GS+ VS INTI S+ G++L T PEP ++G + GG+ AV
Sbjct: 178 LTPNITDIRQPARAAHRAGSDAVSLINTINSITGVNLDTFAPEPTIDGKGSHGGFCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGG+ T DAAEF+ LGA +QVCT M +G+
Sbjct: 238 KPIALHMVSEIAR----DPETAGLPISGIGGITTWRDAAEFLALGAGNLQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + E L+++M +S++D G + H L + + I Q ++ G
Sbjct: 294 KVVQEMIEGLQNWMDAKGHASLDDVIGRAAPNLREWQHLNLNYVAKARIDQDMCIKCG 351
>gi|424896661|ref|ZP_18320235.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393180888|gb|EJC80927.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 437
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/360 (43%), Positives = 207/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIFGADRRLLGLNNIELITDRDLYTNLREMKQVKMNWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ PAR A G++ VS INTI S++ +DL P P V G + GGY AV
Sbjct: 178 LTPNITDVRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEF++LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGITTWRDAAEFLVLGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M S+ED G ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMITGLSDWMDEKGHRSLEDITGHAVPNVTDWQYLNLNYIAKAKIDQDACIKCG 351
>gi|399992478|ref|YP_006572718.1| dihydroorotate dehydrogenase-like protein [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|398657033|gb|AFO90999.1| dihydroorotate dehydrogenase-like protein [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 434
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 209/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTADFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E ++K YPD+ +I S+M + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRPLEVNLEEITRVKKDYPDRAIIVSLMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W++++ RVE TG D IE+NF CPHGM ER MG+AVGQ ++ V W + PV K
Sbjct: 118 WKDILPRVEATGADGIELNFGCPHGMAERGMGSAVGQVPEYIQMVTEWCKKYYSKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A G++ VS INTI S++ ++L + PEP + T GGY AV
Sbjct: 178 LTPNITDIRQPARAAKAGGADAVSLINTINSIVSVNLDAMAPEPTIGDKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +S IGGV T DAAEF+ +GA VQVCT M +G+
Sbjct: 238 KPIALNMVAEIARCPQTH----GLPISAIGGVTTWRDAAEFMTMGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+VK + L +M + ++DF G ++ T + +L + + I Q ++ G
Sbjct: 294 NVVKEMISGLNQWMDDKGYDQLDDFVGKAVPNVTDWQYLDLNYIAKAKINQDDCIKCG 351
>gi|13471617|ref|NP_103183.1| dihydropyrimidine dehydrogenase [Mesorhizobium loti MAFF303099]
gi|14022359|dbj|BAB48969.1| probable oxidoreductase [Mesorhizobium loti MAFF303099]
Length = 437
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 209/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP + RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVIRAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L+T L+E KQ+K +PD+ LIASIM +A+
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLQTNLREMKQVKMDWPDRALIASIMVPCEEAS 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A G++ VS INTI S+ G+DL + P P ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAHAGGTDAVSLINTINSITGVDLDSFAPMPTIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V IA+ + + +SGIGG+ T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIAMNMVAEIAR----DPETRGLPISGIGGITTWRDAAEFLALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L+++M S++D G + T + L + + I Q ++ G
Sbjct: 294 KIVQEMIAGLENWMDEKGHRSLDDIIGRATPNVTDWQYLNLNYVAKAHIDQDACIKCG 351
>gi|410632621|ref|ZP_11343276.1| dihydroorotate dehydrogenase family protein [Glaciecola arctica
BSs20135]
gi|410147858|dbj|GAC20143.1| dihydroorotate dehydrogenase family protein [Glaciecola arctica
BSs20135]
Length = 439
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/337 (41%), Positives = 205/337 (60%), Gaps = 10/337 (2%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L+ + G+ NPF + S PP Y + RAF+ GWG VV KT+ +D VIN++ RY
Sbjct: 4 LACNIAGIDSINPFWLASAPPTDKYINVVRAFEAGWGGVVWKTLGIDP-PVINMSSRY-- 60
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
G + +IG NIELI+DRPLET L+E +Q++ +PD+++I S+M ++ W+
Sbjct: 61 ---GVHHDRARNVIGINNIELITDRPLETNLREIEQIRKEWPDRVIIGSMMAPLDEKTWK 117
Query: 167 ELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMT 226
EL ++ +G+ IE+N CPHGM ER MG+A+GQ L+E+ W+ +PV+ K+T
Sbjct: 118 ELAIKIANSGVHGIELNLGCPHGMCERGMGSAIGQVPELIEQTTRWVKEVVDIPVFTKLT 177
Query: 227 PNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHP 286
PNITDI A AL+ G++ VS INT+ S+ +DL + P P V+G T GGY AV P
Sbjct: 178 PNITDILVAAEAALKGGADAVSLINTVNSIASVDLDLMAPTPTVDGKGTHGGYCGSAVKP 237
Query: 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGL 346
IAL V IA+ + ++ +S IGG+ET DAAEFI LGA+ VQVCT M++G+ +
Sbjct: 238 IALHMVGEIARNPDT----RNLQISAIGGIETWRDAAEFIALGASGVQVCTAAMLYGFRI 293
Query: 347 VKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
V + L++F+ ++S+ F+G +I EL
Sbjct: 294 VDDMIAGLENFLDEKGYASLSAFQGKAIPNVVNWNEL 330
>gi|336235880|ref|YP_004588496.1| dihydroorotate dehydrogenase family protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|335362735|gb|AEH48415.1| dihydroorotate dehydrogenase family protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 427
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 205/339 (60%), Gaps = 15/339 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI + G++ PNPF + S PP + ++RAF+ GWG V KT+ ++NV+ R+A
Sbjct: 3 DLSINLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GEPILNVSSRFA 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ ++G+ NIELI+DRPLE LKE + K +PD+ ++AS+M E +
Sbjct: 60 AV------SFNGQRVMGFNNIELITDRPLEVNLKEIYETKKRFPDRAVVASLMVEPKREK 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ RVE+ G+D +E+NF CPHGM ER MG+A GQ L+E+ W+ A PV K
Sbjct: 114 WHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVEKQTYWVKEVARTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT A A++ G++ +S INTI S+MG+DL T P V G GGY AV
Sbjct: 174 LTPNITDITATAEAAVQGGADAISMINTINSLMGVDLDTWNTIPHVAGKGAHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V A+ + +SGIGG+ + DA EF+L+GA VQVCT VM HG+
Sbjct: 234 KPIALNMVAECARHPRIHV-----PISGIGGISSWKDAVEFMLMGATGVQVCTAVMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+++ + E L ++ +S+ D G S+ ++ +L
Sbjct: 289 RIIEDMIEGLNHYLDEKGIASVMDIVGKSVHKYSNWGDL 327
>gi|307944819|ref|ZP_07660157.1| dihydropyrimidine dehydrogenase [NADP+] [Roseibium sp. TrichSKD4]
gi|307772033|gb|EFO31256.1| dihydropyrimidine dehydrogenase [NADP+] [Roseibium sp. TrichSKD4]
Length = 437
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 209/358 (58%), Gaps = 13/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL GL+ PNPF + S PP + RAF+ GWG VV KT+ D V+NV PRY
Sbjct: 3 DLRTNFIGLKSPNPFWLASAPPTDKAYNVIRAFEAGWGGVVWKTLGEDP-PVVNVNGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA Q++G NIELI+DRPL+ L+E KQ+K +PD+ ++ S+M +
Sbjct: 62 -----GAIHGKDRQLLGLNNIELITDRPLDVNLQEIKQVKRDWPDRAMVVSLMVPCEEQN 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W ++ +VE+TG D +E+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 117 WINILKKVEDTGADGVELNFGCPHGMSERGMGSAVGQVPEYIEMVTRWCKQHTRMPVIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PA+ A G++ VS INTI S++G+DL + P P ++G GGY AV
Sbjct: 177 LTPNITDIRKPAQAAHAGGADAVSLINTINSIVGVDLDAMAPSPTIDGKGAHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGGV T DAAEF+ LGA +VQVCT M +G+
Sbjct: 237 KPIALNMVAEIAR----DPTTHGLPISGIGGVTTWRDAAEFMALGAGSVQVCTAAMTYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L D+M ++S++ F G ++ + H L + + I Q ++ G
Sbjct: 293 KVVQDMIDGLSDWMDRSGYTSVDQFVGKAVPNCSDWQHLNLNYIAKAKIDQDLCIKCG 350
>gi|418939698|ref|ZP_13493087.1| dihydroorotate dehydrogenase family protein [Rhizobium sp.
PDO1-076]
gi|375053583|gb|EHS49973.1| dihydroorotate dehydrogenase family protein [Rhizobium sp.
PDO1-076]
Length = 437
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 206/358 (57%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFRAGWGGVVWKTLGSEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPL+ L+E KQ+K +PD+ L+ASIM +
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRPLQINLQEMKQVKMKWPDRALVASIMVPCVEEE 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ +E V W + +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVRWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNI DI +PAR A G++ VS INTI S++ +DL P P V G T GGY AV
Sbjct: 178 LTPNIADIRKPARAAKSGGTDAVSLINTINSIVSVDLDNFAPNPTVGGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +SGIGGV T DAAEF++LGA VQVCT M +G+
Sbjct: 238 KPIALNMVAEIARDPETH----GLPISGIGGVTTWRDAAEFMVLGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L D+M ++D G ++ T + L + + I Q ++ G
Sbjct: 294 KIVEEMITGLSDWMDAKGHRDLDDITGRAVPNVTDWQYLNLNYIAKAHIDQDACIKCG 351
>gi|403235178|ref|ZP_10913764.1| dihydropyrimidine dehydrogenase subunit B [Bacillus sp. 10403023]
Length = 427
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 202/339 (59%), Gaps = 15/339 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL I + G++ PNPF + S PP + ++RAFD GWG V KT+ ++NVT R+
Sbjct: 3 DLRINLAGIESPNPFWLASAPPTNSGYQVQRAFDAGWGGAVWKTL---GDPILNVTSRFG 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ + G+ NIELISDRP+E LKE K+ K L+P+ +IAS+M E +
Sbjct: 60 AV------SFNGQRVAGFNNIELISDRPIEVNLKEIKETKKLFPNHTIIASLMVEPKQEK 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ RVE+ G+D +E+NF CPHGM ER MG+A GQ L+E+ W+ A PV K
Sbjct: 114 WHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPSLVEQQTYWVKEVAQTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT A A R G++ +S INTI S+ G+DL T P V G GGY AV
Sbjct: 174 LTPNITDITATAEAATRGGADAISMINTINSLAGVDLDTWNTIPHVGGKGAHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V A+ N +SGIGG+ T DA EF+L+GA+ VQVCT M HG+
Sbjct: 234 KPIALNMVAECAR--SPHIN---VPISGIGGISTWQDAVEFMLMGASGVQVCTAAMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + E L +++ +S+ D G ++ ++ +L
Sbjct: 289 RIVEDMIEGLDNYLDQKGIASVMDIVGKTVPKYSDWGDL 327
>gi|395761013|ref|ZP_10441682.1| dihydropyrimidine dehydrogenase subunit B [Janthinobacterium
lividum PAMC 25724]
Length = 426
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/350 (43%), Positives = 206/350 (58%), Gaps = 11/350 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIDFCGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G N +++G+ NIELI+DR LE L+E Q+K +PD+ +I S+M + W
Sbjct: 62 ALY-GKNR----EVVGFNNIELITDRSLEINLREITQVKKDWPDRAMIVSLMLPCEEHYW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+++ +VE TG D IE+NF CPHGMPER MGAAVGQ ++ V W + +PV K+
Sbjct: 117 ADILPKVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVQMVTAWCKKYSRLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITD+ PAR A G++ VS INTI S+ +DL + P V G ST GGY AV
Sbjct: 177 TPNITDVRMPARAAKAGGADAVSLINTINSITSLDLDRMVALPIVGGASTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ + + +SGIGG+ DAAEFI LGA VQVCT M+HG+
Sbjct: 237 PIALNMVAEIAR----DPQTRGLPISGIGGIGNWRDAAEFIALGAGCVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRK 395
+V+ + + L +M + I DF G ++ TT + + M + I K
Sbjct: 293 IVEEMKDGLSRWMDEKGYERISDFSGKAVAN-TTDWKYLDMNYQVIAHIK 341
>gi|340777860|ref|ZP_08697803.1| dihydropyrimidine dehydrogenase subunit B [Acetobacter aceti NBRC
14818]
Length = 422
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/338 (43%), Positives = 204/338 (60%), Gaps = 10/338 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ D V+NV+ RY
Sbjct: 3 DLTTVFAGIRSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEDP-PVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L NG+ ++IG NIELISDRPL T + E K +K YPD+ +I S+M + W
Sbjct: 62 SLDF--NGA---RMIGLNNIELISDRPLATNIAEIKAVKRDYPDRAVIVSLMVPCEEEKW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ +E V W +PV K+
Sbjct: 117 KAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTRWCKQNTRMPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT+I PAR A R G++ VS INTI SV+G+DL + P P V G T GGY AV
Sbjct: 177 TPNITNILMPARAAKRGGADAVSLINTIQSVIGVDLDQMAPMPVVGGLGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + IA+ + +SGIGG+ + DAAEF+ +G+ T+QVCT M +G+
Sbjct: 237 PIALRMIGEIAR----DPEMAGMPISGIGGIGSWRDAAEFLAMGSTTLQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + + L +M ++SI+D G +++ F +L
Sbjct: 293 IVEDMADGLSAWMDQKGYNSIDDVSGRALKQFVPWNQL 330
>gi|423720427|ref|ZP_17694609.1| dihydropyrimidine dehydrogenase, subunit B [Geobacillus
thermoglucosidans TNO-09.020]
gi|383366482|gb|EID43772.1| dihydropyrimidine dehydrogenase, subunit B [Geobacillus
thermoglucosidans TNO-09.020]
Length = 427
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 205/339 (60%), Gaps = 15/339 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI + G++ PNPF + S PP + ++RAF+ GWG V KT+ ++NV+ R+A
Sbjct: 3 DLSINLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GEPILNVSSRFA 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ ++G+ NIELI+DRPLE LKE + K +PD+ ++AS+M E +
Sbjct: 60 AV------SFNGQRVMGFNNIELITDRPLEVNLKEIYETKKRFPDRAVVASLMVEPKREK 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ RVE+ G+D +E+NF CPHGM ER MG+A GQ L+E+ W+ A PV K
Sbjct: 114 WHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVEKQTYWVKEVARTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT A A++ G++ +S INTI S+MG+DL T P V G GGY AV
Sbjct: 174 LTPNITDITATAEAAVQGGADAISMINTINSLMGVDLDTWNTIPHVAGKGAHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V A+ + +SGIGG+ + DA EF+L+GA VQVCT VM HG+
Sbjct: 234 KPIALNMVAECARHPRIHV-----PISGIGGISSWKDAVEFMLMGATGVQVCTAVMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+++ + E L ++ +S+ D G S+ ++ +L
Sbjct: 289 RIIEDMIEGLNYYLDEKGIASVMDIVGKSVHKYSNWGDL 327
>gi|421593477|ref|ZP_16038033.1| dihydropyrimidine dehydrogenase subunit B [Rhizobium sp. Pop5]
gi|403700582|gb|EJZ17703.1| dihydropyrimidine dehydrogenase subunit B [Rhizobium sp. Pop5]
Length = 437
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 207/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIFGADRRLLGLNNIELITDRDLYTNLREMKQVKMNWPDRALIASIMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKSILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A G++ VS INTI S++ +DL P P V G + GGY AV
Sbjct: 178 LTPNITDIRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEF++LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGITTWRDAAEFLVLGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M +++D G ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMITGLSDWMDEKGHKTLDDITGRAVPNVTDWQYLNLNYVAKAKIDQDACIKCG 351
>gi|312111477|ref|YP_003989793.1| dihydroorotate dehydrogenase [Geobacillus sp. Y4.1MC1]
gi|311216578|gb|ADP75182.1| dihydroorotate dehydrogenase family protein [Geobacillus sp.
Y4.1MC1]
Length = 427
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 205/339 (60%), Gaps = 15/339 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI + G++ PNPF + S PP + ++RAF+ GWG V KT+ ++NV+ R+A
Sbjct: 3 DLSINLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GEPILNVSSRFA 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ ++G+ NIELI+DRPLE LKE + K +PD+ ++AS+M E +
Sbjct: 60 AV------SFNGQRVMGFNNIELITDRPLEVNLKEIYETKKRFPDRAVVASLMVEPKREK 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ RVE+ G+D +E+NF CPHGM ER MG+A GQ L+E+ W+ A PV K
Sbjct: 114 WHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVEKQTYWVKEVARTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT A A++ G++ +S INTI S+MG+DL T P V G GGY AV
Sbjct: 174 LTPNITDITATAEAAVQGGADAISMINTINSLMGVDLDTWNTIPHVAGKGAHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V A+ + +SGIGG+ + DA EF+L+GA VQVCT VM HG+
Sbjct: 234 KPIALNMVAECARHPRIHV-----PISGIGGISSWKDAVEFMLMGATGVQVCTAVMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+++ + E L ++ +S+ D G S+ ++ +L
Sbjct: 289 RIIEDMIEGLNYYLDEKGIASVMDIVGKSVHKYSNWGDL 327
>gi|190893106|ref|YP_001979648.1| dihydropyrimidine dehydrogenase [Rhizobium etli CIAT 652]
gi|190698385|gb|ACE92470.1| dihydropyrimidine dehydrogenase protein [Rhizobium etli CIAT 652]
Length = 437
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 207/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYTNLREMKQVKMNWPDRALIASIMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A G++ VS INTI S++ +DL P P V G + GGY AV
Sbjct: 178 LTPNITDIRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEF+ LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGITTWRDAAEFLALGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M +++D G +++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMITGLSDWMDEKGHKTLDDITGRAVQNVTDWQYLNLNYIAKAKIDQDACIKCG 351
>gi|163796768|ref|ZP_02190726.1| dihydropyrimidine dehydrogenase [alpha proteobacterium BAL199]
gi|159178022|gb|EDP62569.1| dihydropyrimidine dehydrogenase [alpha proteobacterium BAL199]
Length = 435
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 212/358 (59%), Gaps = 13/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+ G++ PNPF + S PP + RAF GWG VV KT+ LD ++NV PRY
Sbjct: 3 DIRSNFIGIKSPNPFWLASAPPTDKEYNVVRAFKAGWGGVVWKTLGLDP-HIVNVNGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPL+ L E K++K +PD+ ++ S+M +A
Sbjct: 62 -----GAVWGADRRLLGLNNIELITDRPLQVNLDEIKRVKRDWPDRAVVVSLMVPCEEAC 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W +++ +V++TG D +E+NF CPHGM ER MG+AVGQ +E V W+ A +PV K
Sbjct: 117 WTDIMKQVDDTGADGVELNFGCPHGMSERGMGSAVGQVPEYIEMVTRWVKASTRMPVIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A + G++ VS INT+ S+ ++L T PEP ++G + GGY AV
Sbjct: 177 LTPNITDIRYPARAAHKGGADAVSLINTVSSITSVNLDTFSPEPSIDGKGSHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ + +SGIGG+ T DAAEF+ LGA VQVCT M +G+
Sbjct: 237 KPIALNMVADIARDAET----RGLPISGIGGITTWRDAAEFMALGAGNVQVCTAAMTYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + E LK++M ++ F G ++ T + L + + I Q ++ G
Sbjct: 293 KIVQEMIEGLKNWMDEAGHPDLDAFVGRAVPNVTDWQYLNLNYVAKARIDQDSCIQCG 350
>gi|405377660|ref|ZP_11031599.1| dihydroorotate dehydrogenase family protein [Rhizobium sp. CF142]
gi|397325787|gb|EJJ30113.1| dihydroorotate dehydrogenase family protein [Rhizobium sp. CF142]
Length = 437
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 208/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNDFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L+T L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLQTNLREMKQVKMNWPDRALIASIMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEET D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETEADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A G++ VS INTI S++ +DL P P V G + GGY AV
Sbjct: 178 LTPNITDIRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ +++ +SGIGG+ T DAAEF++LGA VQVCT M +G+
Sbjct: 238 KPIALNMVAEIARDPETQ----GLPISGIGGITTWRDAAEFLVLGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L D+M +++D G +++ T + L + + I Q ++ G
Sbjct: 294 KIVQEMITGLSDWMDEKGHKTLDDITGRAVQNVTDWQYLNLNYIAKAKIDQDACIKCG 351
>gi|378826930|ref|YP_005189662.1| putative dihydropyrimidine dehydrogenase [Sinorhizobium fredii
HH103]
gi|365179982|emb|CCE96837.1| putative dihydropyrimidine dehydrogenase [Sinorhizobium fredii
HH103]
Length = 437
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 208/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYVNLREMKQVKMNWPDRALIASIMVPCEENA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A G++ VS INTI S+ ++L T PEP ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAKAGGTDAVSLINTINSITAVNLDTFSPEPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEF+ LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGITTWRDAAEFLALGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M +++D G ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMISGLSDWMDAKGHRTLDDICGRAVPNVTDWQYLNLNYVAKAKIDQDACIKCG 351
>gi|89055203|ref|YP_510654.1| dihydropyrimidine dehydrogenase [Jannaschia sp. CCS1]
gi|88864752|gb|ABD55629.1| dihydroorotate oxidase B, catalytic subunit / dihydrouracil
dehydrogenase (NAD+) / dihydropyrimidine dehydrogenase
(NADP+) [Jannaschia sp. CCS1]
Length = 434
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 211/358 (58%), Gaps = 13/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G+ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTSNFIGITSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E K++KA YPD+ +I SIM +AA
Sbjct: 63 -----GAIYGADRRLLGLNNIELITDRDLYTNLEEIKRVKADYPDRAIIVSIMVPCEEAA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VE+TG D IE+NF CPHGM ER MGAAVGQ +E V W + PV K
Sbjct: 118 WKAILPLVEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWCKQYYSKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT+PA A R G++ VS INTI S+ ++L T+ PEP ++G + GGY AV
Sbjct: 178 LTPNITDITKPAAAAKRGGADAVSLINTINSITSVNLDTMSPEPSIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V IA+ ++ +SGIGGV T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIAMSMVSEIARSPETH----GLPISGIGGVTTWRDAAEFMTLGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L F+ +++D G ++ T + L + + I Q ++ G
Sbjct: 294 KIVEEMISGLSQFLDEKGM-TLDDLVGRAVPNVTDWQYLNLNYVAKAQINQDDCIKCG 350
>gi|222149525|ref|YP_002550482.1| dihydropyrimidine dehydrogenase [Agrobacterium vitis S4]
gi|221736507|gb|ACM37470.1| dihydroorotate dihydrogenase protein [Agrobacterium vitis S4]
Length = 437
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 208/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+ G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DIRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGSEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPL+ L+E K +K +PD+ LIASIM +
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRPLQVNLQEMKMVKMNWPDRALIASIMVPCEEEE 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W ++ VEETG D IE+NF CPHGM ER MGAAVGQ +E V W + +PV K
Sbjct: 118 WRAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVRWCKQYSRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A G++ VS INTI S++ +DL + P P V G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAKAGGTDAVSLINTINSIVSVDLDSFAPNPSVGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEF+ LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGITTWRDAAEFLALGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M +S++D G ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVEEMITGLSDWMDAKGHASLDDICGRAVPNVTDWQYLNLNYIAKAQIDQDACIKCG 351
>gi|398354737|ref|YP_006400201.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Sinorhizobium fredii USDA 257]
gi|390130063|gb|AFL53444.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Sinorhizobium fredii USDA 257]
Length = 437
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 208/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYVNLREMKQVKMNWPDRALIASIMVPCEENA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A G++ VS INTI S+ ++L T PEP ++G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAKAGGTDAVSLINTINSITAVNLDTFSPEPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEF+ LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGITTWRDAAEFLALGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M +++D G ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMISGLSDWMDAKGHRTLDDICGRAVPNVTDWQYLNLNYVAKAKIDQDACIKCG 351
>gi|402488808|ref|ZP_10835615.1| dihydropyrimidine dehydrogenase subunit B [Rhizobium sp. CCGE 510]
gi|401812275|gb|EJT04630.1| dihydropyrimidine dehydrogenase subunit B [Rhizobium sp. CCGE 510]
Length = 437
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 207/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYTNLREMKQVKMNWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKSILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNI+DI PAR A G++ VS INTI S++ +DL P P V G + GGY AV
Sbjct: 178 LTPNISDIRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEF++LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGITTWRDAAEFLVLGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M S++D G ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMITGLSDWMDEKGHRSLDDITGRAVPNVTDWQYLNLNYIAKAKIDQDACIKCG 351
>gi|398844037|ref|ZP_10601145.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM84]
gi|398254961|gb|EJN40010.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM84]
Length = 424
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/333 (44%), Positives = 199/333 (59%), Gaps = 10/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RA++ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIQFAGIKSPNPFWLASAPPTDKAYNVVRAYEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A Q+ G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGANRQVQGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCEEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W +PV K+
Sbjct: 117 KFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTYCALPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVGDQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ DAAEFI LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPET----RGLPICGIGGIGNWRDAAEFIALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +M H ++E FRG ++ + T
Sbjct: 293 IVEDMKDGLARWMDQHGHRNLEAFRGQAVAHTT 325
>gi|83951608|ref|ZP_00960340.1| dihydroorotate dehydrogenase family protein [Roseovarius
nubinhibens ISM]
gi|83836614|gb|EAP75911.1| dihydroorotate dehydrogenase family protein [Roseovarius
nubinhibens ISM]
Length = 434
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 147/353 (41%), Positives = 207/353 (58%), Gaps = 17/353 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ V+NV PRY
Sbjct: 3 DLTSNFIGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEAGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E ++K YPD+ LIAS+M N+ +
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRPLEVNLEEMTRVKKDYPDRALIASLMVPVNEES 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ +++ V TG D +E+NF CPHGM ER MG+AVGQ + +V W +PV K
Sbjct: 118 WKRILEAVAGTGCDGVELNFGCPHGMSERGMGSAVGQVPEYVGQVAEWCKTYTDLPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PA+ A +SG++ VS INTI S+ ++L + PEP V+G GGY AV
Sbjct: 178 LTPNITDIRKPAQAAKQSGADAVSLINTINSITSVNLDSFSPEPSVDGLGAHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGGV T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DPATAGLPISGIGGVTTWRDAAEFMALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL-------VRMQQEA 390
+V+ + L +M F+S+++ G ++ +L R+ Q+A
Sbjct: 294 KVVQEMISGLSQYMDEKGFASVDELVGRAVPQVVNWQDLNLNYIAKARIDQDA 346
>gi|400754163|ref|YP_006562531.1| dihydroorotate dehydrogenase-like protein [Phaeobacter
gallaeciensis 2.10]
gi|398653316|gb|AFO87286.1| dihydroorotate dehydrogenase-like protein [Phaeobacter
gallaeciensis 2.10]
Length = 434
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 208/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTADFLGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E ++K YPD+ +I S+M + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRPLEVNLEEITRVKKDYPDRAIIVSLMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W++++ RVE TG D IE+NF CPHGM ER MG+AVGQ ++ V W + PV K
Sbjct: 118 WKDILPRVEATGADGIELNFGCPHGMAERGMGSAVGQVPEYIQMVTEWCKKYYSKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A G++ VS INTI S++ ++L + PEP + T GGY AV
Sbjct: 178 LTPNITDIRHPARAAKAGGADAVSLINTINSIVSVNLDAMAPEPTIGDKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +S IGGV T DAAEF+ +GA VQVCT M +G+
Sbjct: 238 KPIALNMVAEIARCPQTH----GLPISAIGGVTTWRDAAEFMTMGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+VK + L +M + ++DF G ++ T + +L + + I Q ++ G
Sbjct: 294 NVVKEMISGLNQWMDDKGYDRLDDFVGKAVPNVTDWQYLDLNYVAKAKINQDDCIKCG 351
>gi|381211303|ref|ZP_09918374.1| dihydropyrimidine dehydrogenase subunit B [Lentibacillus sp. Grbi]
gi|381211385|ref|ZP_09918456.1| dihydropyrimidine dehydrogenase subunit B [Lentibacillus sp. Grbi]
Length = 422
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 142/338 (42%), Positives = 200/338 (59%), Gaps = 13/338 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+SI G++ PNP+ + S PP ++RAF+ GWG V KT+ V+NVT R+
Sbjct: 3 DISINFAGIESPNPYWLASAPPTNTGYQVQRAFEAGWGGAVWKTL---CEPVLNVTSRF- 58
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
GA+ ++ G+ NIEL+SDRP+E LKE + K +PD +IAS+M E + W
Sbjct: 59 ----GAHHFNGQRVAGFNNIELVSDRPIEDNLKEIYETKKRFPDHPIIASLMVEPQRDKW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ RV++ G+D E+N CPHGM ER MG+AVGQ L+E+ + A VPV K+
Sbjct: 115 HEIVKRVQDVGVDGFELNLGCPHGMSERGMGSAVGQHPDLVEKSTLYAKEVAEVPVITKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDIT AR A R G++ VS INTI S++G+DL T P P V G GGY AV
Sbjct: 175 TPNITDITATARAAERGGADAVSMINTINSLIGVDLDTWNPTPNVNGKGAHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + A+ D + +SGIGG+ T D EF+L+G+ VQVCT M HG+
Sbjct: 235 PIALNMIGECARQP-----DINIPISGIGGISTWQDTVEFMLMGSGGVQVCTAAMHHGFS 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
++ L E L +++ +S+ + G S+E +T + L
Sbjct: 290 IIDDLTEGLSNYLDDKGIASVSELVGKSVEKYTDWSNL 327
>gi|209550605|ref|YP_002282522.1| dihydropyrimidine dehydrogenase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|424917135|ref|ZP_18340499.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|209536361|gb|ACI56296.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|392853311|gb|EJB05832.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 437
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 207/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIFGADRRLLGLNNIELITDRDLYTNLREMKQVKMNWPDRALIASIMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D +E+NF CPHGM ER MG+AVGQ +E V W +P+ K
Sbjct: 118 WKSILPLVEETGADGVELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPIITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ PAR A G++ VS INTI S++ +DL P P V G + GGY AV
Sbjct: 178 LTPNITDVRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEF++LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGITTWRDAAEFLVLGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M S++D G ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMISGLSDWMDEKGHRSLDDITGRAVPNVTDWQYLNLNYIAKAKIDQDACIKCG 351
>gi|424871980|ref|ZP_18295642.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|393167681|gb|EJC67728.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 437
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 207/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYTNLREMKQVKMNWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNI+DI PAR A G++ VS INTI S++ +DL P P V G + GGY AV
Sbjct: 178 LTPNISDIRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEF++LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGITTWRDAAEFLVLGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M S++D G ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMITGLSDWMDEKGHRSLDDITGRAVPNVTDWQYLNLNYIAKAKIDQDACIKCG 351
>gi|424883042|ref|ZP_18306674.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WU95]
gi|392519405|gb|EIW44137.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WU95]
Length = 437
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 207/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYTNLREMKQVKMNWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNI+DI PAR A G++ VS INTI S++ +DL P P V G + GGY AV
Sbjct: 178 LTPNISDIRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEF++LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGITTWRDAAEFLVLGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M ++ED G ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMITGLSDWMDEKGHRNLEDITGRAVPNVTDWQYLNLNYIAKAKIDQDACIKCG 351
>gi|386011373|ref|YP_005929650.1| Dihydropyrimidine dehydrogenase [Pseudomonas putida BIRD-1]
gi|313498079|gb|ADR59445.1| Dihydropyrimidine dehydrogenase [Pseudomonas putida BIRD-1]
Length = 424
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 148/333 (44%), Positives = 200/333 (60%), Gaps = 10/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ Q+ G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGPNRQVQGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCIEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W ++PV K+
Sbjct: 117 KFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVGDQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ DAAEF+ LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPET----RGLPICGIGGIGNWRDAAEFMALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +M H ++IE FRG ++ + T
Sbjct: 293 IVEDMQDGLARWMDQHGHATIEAFRGQAVGHTT 325
>gi|408377715|ref|ZP_11175316.1| dihydropyrimidine dehydrogenase subunit B [Agrobacterium
albertimagni AOL15]
gi|407748706|gb|EKF60221.1| dihydropyrimidine dehydrogenase subunit B [Agrobacterium
albertimagni AOL15]
Length = 437
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 206/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGSEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPL+ L+E K +K +PD+ L+ASIM +
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRPLQINLQEMKMVKKNWPDRALVASIMVPCVEEE 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNI DI +PAR A G++ VS INTI S++ +DL + P P V G T GGY AV
Sbjct: 178 LTPNIADIRKPARAAKAGGTDAVSLINTINSIVSVDLDSFAPSPTVGGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGGV T DAAEF+ LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGVTTWRDAAEFLALGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M S++D G ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMISGLNDWMDAKGHQSLDDICGRAVPNVTDWQYLNLNYIAKAHIDQDACIKCG 351
>gi|227823015|ref|YP_002826987.1| dihydropyrimidine dehydrogenase [Sinorhizobium fredii NGR234]
gi|227342016|gb|ACP26234.1| dihydropyrimidine dehydrogenase [Sinorhizobium fredii NGR234]
Length = 437
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 208/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYVNLREMKQVKMNWPDRALIASIMVPCVEDA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PAR A G++ VS INTI S+ ++L T PEP ++G + GGY AV
Sbjct: 178 LTPNITDVRKPARAAKAGGTDAVSLINTINSITSVNLDTFSPEPSIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEF+ LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGITTWRDAAEFLTLGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M +++D G ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMISGLSDWMDAKGHRTLDDICGRAVPNVTDWQYLNLNYVSKAKIDQDACIKCG 351
>gi|170721018|ref|YP_001748706.1| dihydropyrimidine dehydrogenase [Pseudomonas putida W619]
gi|169759021|gb|ACA72337.1| dihydroorotate dehydrogenase family protein [Pseudomonas putida
W619]
Length = 424
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 148/333 (44%), Positives = 198/333 (59%), Gaps = 10/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A + G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGANRLVQGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCIEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W +PV K+
Sbjct: 117 KFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTHCALPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVGDQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ DAAEFI LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQT----RGLPICGIGGIGNWRDAAEFIALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +M H ++E FRG ++ + T
Sbjct: 293 IVEDMQDGLARWMDQHGHQNLEAFRGQAVAHTT 325
>gi|390448887|ref|ZP_10234502.1| dihydropyrimidine dehydrogenase subunit B [Nitratireductor
aquibiodomus RA22]
gi|389665261|gb|EIM76733.1| dihydropyrimidine dehydrogenase subunit B [Nitratireductor
aquibiodomus RA22]
Length = 436
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 211/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+ G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DIRSNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L L+E KQ+K +PD+ L+ S+M +AA
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYLNLREIKQVKKNWPDRALVVSLMVPCEEAA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEET D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETEADGIELNFGCPHGMSERGMGSAVGQVPEYVEMVVRWCKQTTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PAR A G++ VS INTI S+ G+DL + PEP ++G + GGY AV
Sbjct: 178 LTPNITDVRKPARAAHAGGTDAVSLINTINSITGVDLDSFAPEPTIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +SGIGGV T DAAEF+ LGA TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIARDPET----AGLPISGIGGVTTWRDAAEFLALGAGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + E L+++M ++++D G + T + L + + I Q + ++ G
Sbjct: 294 KIVEEMIEGLENWMDAKGHATLDDVIGRATPNVTDWQYLNLNYVTKARIDQDQCIKCG 351
>gi|433544400|ref|ZP_20500785.1| dihydropyrimidine dehydrogenase subunit B [Brevibacillus agri
BAB-2500]
gi|432184328|gb|ELK41844.1| dihydropyrimidine dehydrogenase subunit B [Brevibacillus agri
BAB-2500]
Length = 425
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 199/333 (59%), Gaps = 13/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI + G+ PNPF + S PP + ++RAF+ GWG V KT+ +INVT R+A
Sbjct: 3 DLSINLAGITSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GEPIINVTSRFA 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G ++ G+ NIELI+D+PLE LKE ++ K +P LIAS+M E+ + AW
Sbjct: 60 GLTFGGQ-----RVFGFNNIELITDKPLEVNLKEMEETKKRFPKHTLIASLMVEHKQEAW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ +VE G+D +E+NF CPHGM ER MG+AVGQ L+ + W+ A PV K+
Sbjct: 115 HEIVKKVEAIGVDGLELNFGCPHGMAERGMGSAVGQHPDLIRQQVEWVKEVAQTPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A G++ +S INTI S+MG+DL P P V+G GGY AV
Sbjct: 175 TPNITDIRFTARAASAGGADAISMINTINSLMGVDLDKWLPIPHVDGKGAHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V A+ + F +SGIGG+ DA EF+L+GA VQVCT M HG+
Sbjct: 235 PIALNMV---AECARDPF--VGVPISGIGGISNWRDAVEFLLMGATGVQVCTAAMHHGFR 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +++ +S+ D G ++ ++
Sbjct: 290 IVEDMIDGLNNYLDQRKIASVMDIVGKAVHTYS 322
>gi|254439390|ref|ZP_05052884.1| dihydroorotate dehydrogenase family protein [Octadecabacter
antarcticus 307]
gi|198254836|gb|EDY79150.1| dihydroorotate dehydrogenase family protein [Octadecabacter
antarcticus 307]
Length = 434
Score = 267 bits (683), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 212/358 (59%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTTDFIGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ A +++G NIELI+DR L T L+E K++KA YPD+ +I SIM + A
Sbjct: 63 GVIYG-----ADRRVLGINNIELITDRDLHTNLEEIKRVKADYPDRAIIVSIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VE+TG D IE+NF CPHGM ER MGAAVGQ +E V W + PV K
Sbjct: 118 WKAILPLVEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWCKKYYSKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PA A R G++ VS INTI S+ ++L ++ PEP ++G T GGY AV
Sbjct: 178 LTPNITDVRQPAAAARRGGADAVSLINTINSITSVNLDSMSPEPSIDGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V IA+ ++ K +SGIGGV T DAAEFI LG VQVCT VM +G+
Sbjct: 238 KPIAMSMVSEIARFEET----KGMPISGIGGVTTWRDAAEFITLGCGNVQVCTAVMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L +M +SI+DF GA++ T + L + + I Q + G
Sbjct: 294 KIVQEMISGLSQWMDEKGHTSIQDFMGAAVPNTTDWQYLNLNYIAKAVINQDDCISCG 351
>gi|209544343|ref|YP_002276572.1| dihydropyrimidine dehydrogenase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209532020|gb|ACI51957.1| dihydroorotate dehydrogenase family protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 426
Score = 267 bits (683), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 146/358 (40%), Positives = 208/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G++ PNPF + S PP ++R + GWG VV KT+ D V+NV+ RY
Sbjct: 3 DLRSTLAGIRSPNPFWLASAPPTDKEYNVRRGLEAGWGGVVWKTLGEDP-PVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
N +++G NIELI+DRPL L E K +K YPD+ ++ S+M + +W
Sbjct: 62 AFNYNGN-----RLVGLNNIELITDRPLAVNLAEIKSVKRDYPDRAIVVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
++ VE+TG D IE+NF CPHGM ER MG+AVGQ +E V W+ +P K+
Sbjct: 117 RRILPLVEDTGADGIELNFGCPHGMSERNMGSAVGQVPDYVEMVTRWVKQNTRMPTIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT+I PAR ALR G++ VS INTI SV+ +DL + P P V+G T GGY AV
Sbjct: 177 TPNITNILVPARAALRGGADAVSLINTIQSVVAVDLDAMAPMPVVDGLGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ + +SGIGG+ T DAAEF+++GA VQVCT M +G+
Sbjct: 237 PIALRMVGEIAR----SPDMSGLPISGIGGISTWRDAAEFLVMGATNVQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL-VRMQQEA-IQQRKAVRKGL 401
+V+ + + L ++M F+++ D G ++ F +L + + A I Q ++ GL
Sbjct: 293 IVEDMIDGLSNWMDQKGFAALSDVIGRAVPNFVNWNQLNLNFRTIAKIDQESCIQCGL 350
>gi|241205971|ref|YP_002977067.1| dihydropyrimidine dehydrogenase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859861|gb|ACS57528.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 437
Score = 267 bits (683), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 207/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYTNLREMKQVKMNWPDRALIASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNI+DI PAR A G++ VS INTI S++ +DL P P V G + GGY AV
Sbjct: 178 LTPNISDIRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEF++LG+ VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGITTWRDAAEFLVLGSGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M S++D G ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMITGLSDWMDEKGHRSLDDITGRAVPNVTDWQYLNLNYIAKAKIDQDACIKCG 351
>gi|399048941|ref|ZP_10740218.1| dihydroorotate dehydrogenase family protein [Brevibacillus sp.
CF112]
gi|29170609|gb|AAO66291.1| dihydropyrimidine dehydrogenase [Brevibacillus agri]
gi|398053267|gb|EJL45466.1| dihydroorotate dehydrogenase family protein [Brevibacillus sp.
CF112]
Length = 425
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 198/333 (59%), Gaps = 13/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI + G+ PNPF + S PP + ++RAF+ GWG V KT+ +INVT R+A
Sbjct: 3 DLSINLAGITSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GEPIINVTSRFA 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G ++ G+ NIELI+D+PLE LKE + K +P LIAS+M E+ + AW
Sbjct: 60 GLTFGGQ-----RVFGFNNIELITDKPLEVNLKEMDETKKRFPKHTLIASLMVEHKQEAW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ +VE G+D +E+NF CPHGM ER MG+AVGQ L+ + W+ A PV K+
Sbjct: 115 HEIVKKVEAIGVDGLELNFGCPHGMAERGMGSAVGQHPDLIRQQVEWVKEVAQTPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A G++ +S INTI S+MG+DL P P V+G GGY AV
Sbjct: 175 TPNITDIRFTARAASAGGADAISMINTINSLMGVDLDKWLPIPHVDGKGAHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V A+ + F +SGIGG+ DA EF+L+GA VQVCT M HG+
Sbjct: 235 PIALNMV---AECARDPF--VGVPISGIGGISNWRDAVEFLLMGATGVQVCTAAMHHGFR 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +++ +S+ D G ++ ++
Sbjct: 290 IVEDMIDGLNNYLDQRKIASVMDIVGKAVHTYS 322
>gi|397696041|ref|YP_006533924.1| dihydropyrimidine dehydrogenase [Pseudomonas putida DOT-T1E]
gi|397332771|gb|AFO49130.1| dihydropyrimidine dehydrogenase [Pseudomonas putida DOT-T1E]
Length = 424
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 147/333 (44%), Positives = 200/333 (60%), Gaps = 10/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ Q+ G NIELI+DR L+ L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGPNRQVQGINNIELITDRSLDINLREITQVKKDWPDRALIVSLMVPCIEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W ++PV K+
Sbjct: 117 KFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVGDQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ DAAEF+ LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPET----RGLPICGIGGIGNWRDAAEFMALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +M H S++E FRG ++ + T
Sbjct: 293 IVEDMQDGLARWMDQHGHSTVEAFRGQAVGHTT 325
>gi|229037740|ref|ZP_04189575.1| Dihydroorotate dehydrogenase 1 [Bacillus cereus AH1271]
gi|228727594|gb|EEL78735.1| Dihydroorotate dehydrogenase 1 [Bacillus cereus AH1271]
Length = 416
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 203/338 (60%), Gaps = 13/338 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI + G++ PNPF + S PP + ++RAF GWG V KT+ A V+NV+ R++
Sbjct: 3 DLSINLAGIKSPNPFWLASAPPTNSGYQVQRAFAAGWGGAVWKTL---GAPVVNVSSRFS 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A ++ G+ NIELISDRPLE L+E K +P+ +IAS+M E + W
Sbjct: 60 -----ATNFQGKKVAGFNNIELISDRPLEENLREIYDTKKKFPNHTIIASLMVEPKQHQW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ RV++ G+D E+NF CPHGM ER MG+A GQ L+E+ W+ A VPV K+
Sbjct: 115 HEIVKRVQDVGVDGFELNFGCPHGMAERGMGSASGQVPDLVEKQTYWVKEVAEVPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDITE A A++ G++ VS INTI S+MG+++ T P P V+G GGY AV
Sbjct: 175 TPNITDITETAYAAVKGGADAVSMINTINSLMGVNIDTWNPIPHVDGKGAHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V A+ E N +SG+GG+ D EFIL+G+ +VQVCT M HG+
Sbjct: 235 PIALNMVAECAR--HPEIN---VPISGMGGISNWRDTVEFILMGSTSVQVCTAAMHHGFS 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+++ + + L +++ SS+ D G S+ ++ +L
Sbjct: 290 IIEDMLDGLNNYLDEKGISSVMDIVGKSVPRYSNWGDL 327
>gi|86358877|ref|YP_470769.1| dihydropyrimidine dehydrogenase [Rhizobium etli CFN 42]
gi|86282979|gb|ABC92042.1| probable dihydroorotate oxidase protein [Rhizobium etli CFN 42]
Length = 437
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 206/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIFGADRRLLGLNNIELITDRDLYTNLREMKQVKMNWPDRALIASIMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKSILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A G++ VS INTI S++ +DL P P V G + GGY AV
Sbjct: 178 LTPNITDIRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEF++LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGITTWRDAAEFLVLGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L +M S++D G ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMITGLSGWMDEKGHRSLDDITGRAVSNVTDWQYLNLNYVAKAKIDQDACIKCG 351
>gi|424885677|ref|ZP_18309288.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393177439|gb|EJC77480.1| dihydroorotate dehydrogenase family protein [Rhizobium
leguminosarum bv. trifolii WSM2012]
Length = 437
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 206/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIFGADRRLLGLNNIELITDRDLYTNLREMKQVKMNWPDRALIASIMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEET D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKSILPLVEETNADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ PAR A G++ VS INTI S++ +DL P P V G + GGY AV
Sbjct: 178 LTPNITDVRRPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEF++LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGITTWRDAAEFLVLGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M S++D G ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMITGLSDWMDEKGHRSLDDITGRAVPNVTDWQYLNLNYIAKAKIDQDACIKCG 351
>gi|338997975|ref|ZP_08636657.1| dihydropyrimidine dehydrogenase subunit B [Halomonas sp. TD01]
gi|338765106|gb|EGP20056.1| dihydropyrimidine dehydrogenase subunit B [Halomonas sp. TD01]
Length = 444
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 150/347 (43%), Positives = 204/347 (58%), Gaps = 10/347 (2%)
Query: 37 ASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAK 96
+ DS DLS+ G++ PNPF + S PP + RA++ GWG VV KT+ +
Sbjct: 14 SGDSVVNGVDLSVNFAGIKAPNPFWLASAPPTDKAYNVVRAYEAGWGGVVWKTLG-EEPP 72
Query: 97 VINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI 156
+NV+ RY+ A+ ++IG+ NIELI+DR LE L+E Q+K +PD+ LI SI
Sbjct: 73 AVNVSSRYS-----AHYGKNREVIGFNNIELITDRSLEINLQEITQVKKDWPDRALIVSI 127
Query: 157 MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK 216
M N+ AW ++ VE TG D IE+N CPHGMPER MGAAVGQ+ L+E+V W
Sbjct: 128 MVPCNEEAWAHILPLVEATGADGIELNLGCPHGMPERGMGAAVGQNPDLIEKVAYWCKKH 187
Query: 217 ATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTP 276
+ PV K+TPNITDI A+ ALR G++ VS INTI S+ IDL + +P V ST
Sbjct: 188 YSKPVIVKLTPNITDIRVGAQAALRGGADAVSLINTINSITSIDLDNMVAKPTVGHQSTH 247
Query: 277 GGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336
GGY AV PIAL V IA+ + + LSGIGG+ DAAEF+ LGA +VQVC
Sbjct: 248 GGYCGSAVKPIALNMVAEIARDPAT----AELPLSGIGGISNWRDAAEFVALGAGSVQVC 303
Query: 337 TGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
T M++G+ +V+ + + L +M + SIE F ++ T L
Sbjct: 304 TAAMLNGFRIVEEMKDGLSRWMAEKGYDSIESFSRKAVPQTTDWKHL 350
>gi|399519085|ref|ZP_10759893.1| dihydropyrimidine dehydrogenase [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399112909|emb|CCH36451.1| dihydropyrimidine dehydrogenase [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 424
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 150/352 (42%), Positives = 209/352 (59%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIEFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A ++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGADRSVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W ++PV K+
Sbjct: 117 KTILPLVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ IDL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRTSARAAHRGGADAVSLINTINSITSIDLERMVALPIVGTQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ + + + GIGG+ + DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIAR----DPETRGLPICGIGGIGSWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M ++S++DF G ++ +Y + +++ R+ Q+A
Sbjct: 293 IVEEMKDGLSRWMDSQGYASLQDFSGRAVGNTTDWKYLDINYQVIARIDQDA 344
>gi|261419625|ref|YP_003253307.1| dihydropyrimidine dehydrogenase [Geobacillus sp. Y412MC61]
gi|319766442|ref|YP_004131943.1| dihydroorotate dehydrogenase [Geobacillus sp. Y412MC52]
gi|261376082|gb|ACX78825.1| dihydroorotate dehydrogenase family protein [Geobacillus sp.
Y412MC61]
gi|317111308|gb|ADU93800.1| dihydroorotate dehydrogenase family protein [Geobacillus sp.
Y412MC52]
Length = 429
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 202/339 (59%), Gaps = 15/339 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI + G++ PNPF + S PP + ++RAF+ GWG V KT+ ++NV+ R+A
Sbjct: 3 DLSINLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GEPILNVSSRFA 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ ++G+ NIELI+DRPLE LKE + K +PD+ ++AS+M E +
Sbjct: 60 AI------SFNGQRVMGFNNIELITDRPLEENLKEIYETKKRFPDRAVVASLMVEPKREK 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ RVE+ G+D +E+NF CPHGM ER MG+A GQ L+E W+ A PV K
Sbjct: 114 WHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVERQTYWVKEVARTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT A A + G++ +S INTI S+MG+DL T P V G GGY AV
Sbjct: 174 LTPNITDITATAEAAAQGGADAISLINTINSLMGVDLDTWNTIPHVAGKGAHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V A+ + +SGIGG+ DA EF+L+GA VQVCT VM HG+
Sbjct: 234 KPIALNMVAECARHPRIRI-----PISGIGGISNWRDAVEFMLMGATGVQVCTAVMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+++ + E L ++ +S+ D G S+ ++ +L
Sbjct: 289 RIIEDMIEGLNHYLDEKGIASVMDIVGKSVSKYSDWGDL 327
>gi|56419957|ref|YP_147275.1| dihydropyrimidine dehydrogenase [Geobacillus kaustophilus HTA426]
gi|56379799|dbj|BAD75707.1| dihydropyrimidine dehydrogenase [Geobacillus kaustophilus HTA426]
Length = 429
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 202/339 (59%), Gaps = 15/339 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI + G++ PNPF + S PP + ++RAF+ GWG V KT+ ++NV+ R+A
Sbjct: 3 DLSINLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GEPILNVSSRFA 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ ++G+ NIELI+DRPLE LKE + K +PD+ ++AS+M E +
Sbjct: 60 AI------SFNGQRVMGFNNIELITDRPLEENLKEIYETKKRFPDRAVVASLMVEPKREK 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ RVE+ G+D +E+NF CPHGM ER MG+A GQ L+E W+ A PV K
Sbjct: 114 WHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVERQTYWVKEVARTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT A A + G++ +S INTI S+MG+DL T P V G GGY AV
Sbjct: 174 LTPNITDITATAEAAAQGGADAISLINTINSLMGVDLDTWNTIPHVAGKGAHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V A+ + +SGIGG+ DA EF+L+GA VQVCT VM HG+
Sbjct: 234 KPIALNMVAECARHPRIRI-----PISGIGGISNWRDAVEFMLMGATGVQVCTAVMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+++ + E L ++ +S+ D G S+ ++ +L
Sbjct: 289 RIIEDMIEGLNHYLDEKGIASVMDIVGKSVSKYSDWGDL 327
>gi|375008433|ref|YP_004982066.1| Dihydroorotate dehydrogenase [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359287282|gb|AEV18966.1| Dihydroorotate dehydrogenase [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 429
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 202/339 (59%), Gaps = 15/339 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI + G++ PNPF + S PP + ++RAF+ GWG V KT+ ++NV+ R+A
Sbjct: 3 DLSINLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GEPILNVSSRFA 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ ++G+ NIELI+DRPLE LKE + K +PD+ ++AS+M E +
Sbjct: 60 AI------SFNGQRVMGFNNIELITDRPLEENLKEIYETKKRFPDRAVVASLMVEPKREK 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ RVE+ G+D +E+NF CPHGM ER MG+A GQ L+E W+ A PV K
Sbjct: 114 WHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVERQTYWVKEVARTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT A A + G++ +S INTI S+MG+DL T P V G GGY AV
Sbjct: 174 LTPNITDITATAEAAAQGGADAISLINTINSLMGVDLDTWNTIPHVAGKGAHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V A+ + +SGIGG+ DA EF+L+GA VQVCT VM HG+
Sbjct: 234 KPIALNMVAECARHPRIRI-----PISGIGGISNWRDAVEFMLMGATGVQVCTAVMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+++ + E L ++ +S+ D G S+ ++ +L
Sbjct: 289 RIIEDMIEGLNHYLDEKGIASVMDIVGKSVSKYSDWGDL 327
>gi|26990740|ref|NP_746165.1| dihydropyrimidine dehydrogenase [Pseudomonas putida KT2440]
gi|24985736|gb|AAN69629.1|AE016596_7 dihydroorotate dehydrogenase family protein [Pseudomonas putida
KT2440]
Length = 424
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/333 (44%), Positives = 199/333 (59%), Gaps = 10/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ Q+ G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGPNRQVQGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCIEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W +PV K+
Sbjct: 117 KFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTYCALPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVGDQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ DAAEF+ LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPET----RGLPICGIGGIGNWRDAAEFMALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +M H +++E FRG ++ + T
Sbjct: 293 IVEDMQDGLARWMDQHGHATVEAFRGQAVGHTT 325
>gi|229162093|ref|ZP_04290066.1| Dihydroorotate dehydrogenase 1 [Bacillus cereus R309803]
gi|228621415|gb|EEK78268.1| Dihydroorotate dehydrogenase 1 [Bacillus cereus R309803]
Length = 416
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 203/338 (60%), Gaps = 13/338 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI + G++ PNPF + S PP + ++RAF GWG V KT+ A V+NV+ R++
Sbjct: 3 DLSINLAGIKSPNPFWLASAPPTNSGYQVQRAFAAGWGGAVWKTL---GAPVVNVSSRFS 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A ++ G+ NIELISDRPLE L+E K +P+ +IAS+M E + W
Sbjct: 60 -----ATNFQGKKVAGFNNIELISDRPLEENLREIYDTKKKFPNHTIIASLMVEPKQHQW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ RV++ G+D E+NF CPHGM ER MG+A GQ L+E+ W+ A VPV K+
Sbjct: 115 HEIVKRVQDVGVDGFELNFGCPHGMAERGMGSASGQVPDLVEKQTYWVKEVAEVPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDITE A A++ G++ VS INTI S+MG+++ T P P V+G GGY AV
Sbjct: 175 TPNITDITETAYAAVQGGADAVSMINTINSLMGVNIDTWNPIPHVDGKGAHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V A+ E N +SG+GG+ D EFIL+G+ +VQVCT M HG+
Sbjct: 235 PIALNMVAECAR--HPEIN---VPISGMGGISNWRDTVEFILMGSTSVQVCTAAMHHGFS 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+++ + + L +++ SS+ D G S+ ++ +L
Sbjct: 290 IIEDMLDGLNNYLDEKGISSVMDIVGKSVPRYSNWGDL 327
>gi|352105971|ref|ZP_08961082.1| dihydropyrimidine dehydrogenase subunit B [Halomonas sp. HAL1]
gi|350598063|gb|EHA14187.1| dihydropyrimidine dehydrogenase subunit B [Halomonas sp. HAL1]
Length = 447
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/347 (43%), Positives = 204/347 (58%), Gaps = 10/347 (2%)
Query: 37 ASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAK 96
+ DS DLS+ G++ PNPF + S PP + RA++ GWG VV KT+ +
Sbjct: 17 SGDSVVNGVDLSVNFAGIKAPNPFWLASAPPTDKAYNVVRAYEAGWGGVVWKTLG-EEPP 75
Query: 97 VINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI 156
+NV+ RY+ A+ ++IG+ NIELI+DR LE LKE Q+K +PD+ LI SI
Sbjct: 76 AVNVSSRYS-----AHYGKNREVIGFNNIELITDRSLEINLKEITQVKKDWPDRALIVSI 130
Query: 157 MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK 216
M N+ AW ++ VE TG D IE+N CPHGMPER MGAAVGQ+ L+E+V W
Sbjct: 131 MVPCNEEAWAYILPLVEATGADGIELNLGCPHGMPERGMGAAVGQNPDLIEKVTYWCKKH 190
Query: 217 ATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTP 276
+ PV K+TPNITDI A+ ALR G++ VS INTI S+ IDL + +P V ST
Sbjct: 191 YSKPVIVKLTPNITDIRVGAQAALRGGADAVSLINTINSITSIDLDNMVAKPTVGHQSTH 250
Query: 277 GGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336
GGY AV PIA+ V IA+ + +SGIGG+ T DAAEFI LGA +VQVC
Sbjct: 251 GGYCGSAVKPIAMNMVAEIAR----DPATPTLPISGIGGISTWRDAAEFIALGAGSVQVC 306
Query: 337 TGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
T M++G+ +V+ + + L +M + SIE F +I T L
Sbjct: 307 TAAMLNGFRIVEEMKDGLSRWMAEKGYDSIEAFSRKAIPQTTDWKHL 353
>gi|148547035|ref|YP_001267137.1| dihydropyrimidine dehydrogenase [Pseudomonas putida F1]
gi|148511093|gb|ABQ77953.1| dihydropyrimidine dehydrogenase (NADP+) / dihydrouracil
dehydrogenase (NAD+) [Pseudomonas putida F1]
Length = 424
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/333 (44%), Positives = 199/333 (59%), Gaps = 10/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ Q+ G NIELI+DR L+ L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGPNRQVQGINNIELITDRSLDINLREITQVKKDWPDRALIVSLMVPCIEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W +PV K+
Sbjct: 117 KFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTYCALPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVGDQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ DAAEF+ LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPET----RGLPICGIGGIGNWRDAAEFMALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +M H ++IE FRG ++ + T
Sbjct: 293 IVEDMQDGLARWMDQHGHATIEAFRGQAVGHTT 325
>gi|339488342|ref|YP_004702870.1| dihydropyrimidine dehydrogenase [Pseudomonas putida S16]
gi|338839185|gb|AEJ13990.1| dihydropyrimidine dehydrogenase [Pseudomonas putida S16]
Length = 424
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/348 (42%), Positives = 207/348 (59%), Gaps = 11/348 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIEFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ Q+ G NIELI+DR L+ L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGPNRQVQGINNIELITDRSLDINLREITQVKKDWPDRALIVSLMVPCVEDSW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W ++PV K+
Sbjct: 117 KFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVGDQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ + DAAEF+ LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQT----RGLPICGIGGIGSWRDAAEFMALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQ 393
+V+ + + L +M H +IE FRG ++ + TT + + M +++
Sbjct: 293 IVEDMKDGLARWMDQHGHRNIEAFRGQAVGH-TTDWKYLDMNYKSVAH 339
>gi|448745605|ref|ZP_21727275.1| Aldolase-type TIM barrel [Halomonas titanicae BH1]
gi|445566333|gb|ELY22439.1| Aldolase-type TIM barrel [Halomonas titanicae BH1]
Length = 444
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/347 (43%), Positives = 204/347 (58%), Gaps = 10/347 (2%)
Query: 37 ASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAK 96
+ DS DLS+ G++ PNPF + S PP + RA++ GWG VV KT+ +
Sbjct: 14 SGDSVVNGVDLSVNFAGIKAPNPFWLASAPPTDKAYNVVRAYEAGWGGVVWKTLG-EEPP 72
Query: 97 VINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI 156
+NV+ RY+ A+ ++IG+ NIELI+DR LE LKE Q+K +PD+ LI SI
Sbjct: 73 AVNVSSRYS-----AHYGKNREVIGFNNIELITDRSLEINLKEITQVKKDWPDRALIVSI 127
Query: 157 MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK 216
M N+ AW ++ VE TG D IE+N CPHGMPER MGAAVGQ+ L+E+V W
Sbjct: 128 MVPCNEEAWAYILPLVEATGADGIELNLGCPHGMPERGMGAAVGQNPDLIEKVTYWCKKH 187
Query: 217 ATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTP 276
+ PV K+TPNITDI A+ ALR G++ VS INTI S+ IDL + +P V ST
Sbjct: 188 YSKPVIVKLTPNITDIRVGAQAALRGGADAVSLINTINSITSIDLDNMVAKPTVGHQSTH 247
Query: 277 GGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336
GGY AV PIA+ V IA+ + +SGIGG+ T DAAEFI LGA +VQVC
Sbjct: 248 GGYCGSAVKPIAMNMVAEIAR----DPATPTLPISGIGGISTWRDAAEFIALGAGSVQVC 303
Query: 337 TGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
T M++G+ +V+ + + L +M + SIE F +I T L
Sbjct: 304 TAAMLNGFRIVEEMKDGLSRWMAEKGYDSIEAFSRKAIPQTTDWKHL 350
>gi|167034636|ref|YP_001669867.1| dihydropyrimidine dehydrogenase [Pseudomonas putida GB-1]
gi|166861124|gb|ABY99531.1| dihydroorotate dehydrogenase family protein [Pseudomonas putida
GB-1]
Length = 424
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/352 (42%), Positives = 205/352 (58%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A + G NIELI+DR L+ L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGANRMVQGINNIELITDRSLDINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W +PV K+
Sbjct: 117 KFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTYCALPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVGDQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ + + + + GIGG+ DAAEF+ LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIAR----DPDTRGLPICGIGGIGNWRDAAEFMALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT-------THTELVRMQQEA 390
+V+ + + L +M H ++IE FRG ++ + T + + + QEA
Sbjct: 293 IVEDMKDGLARWMDQHGHANIEAFRGQAVGHTTDWKYLDINYKSVAHIDQEA 344
>gi|424943142|ref|ZP_18358905.1| probable oxidoreductase [Pseudomonas aeruginosa NCMG1179]
gi|346059588|dbj|GAA19471.1| probable oxidoreductase [Pseudomonas aeruginosa NCMG1179]
Length = 424
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 208/352 (59%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RA+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ Q+ G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGPNRQVHGINNIELITDRSLEINLREIAQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W A ++PV K+
Sbjct: 117 KYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKAHCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVALPVVGTQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ + DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQT----RGLPICGIGGIGSWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M H + + DF G ++ +Y + +++ R+ Q+A
Sbjct: 293 IVEDMQDGLARWMDSHGYQRLSDFSGGAVGNTTDWKYLDINYQVIARIDQDA 344
>gi|418588432|ref|ZP_13152444.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
MPAO1/P1]
gi|418592958|ref|ZP_13156817.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
MPAO1/P2]
gi|421515056|ref|ZP_15961742.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
PAO579]
gi|375040828|gb|EHS33560.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
MPAO1/P1]
gi|375048211|gb|EHS40739.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
MPAO1/P2]
gi|404348784|gb|EJZ75121.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
PAO579]
Length = 424
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 208/352 (59%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RA+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ Q+ G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGPNRQVQGINNIELITDRSLEINLREIAQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W A ++PV K+
Sbjct: 117 KYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKAHCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVALPVVGTQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ + DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQT----RGLPICGIGGIGSWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M H + + DF G ++ +Y + +++ R+ Q+A
Sbjct: 293 IVEDMQDGLARWMDSHGYQRLSDFSGGAVGNTTDWKYLDINYQVIARIDQDA 344
>gi|120609661|ref|YP_969339.1| dihydropyrimidine dehydrogenase [Acidovorax citrulli AAC00-1]
gi|120588125|gb|ABM31565.1| dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine
dehydrogenase (NADP+) [Acidovorax citrulli AAC00-1]
Length = 442
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 208/351 (59%), Gaps = 13/351 (3%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRYARLRAGA 111
G++ PNPF + S PP + RAF+ GWG VV KT+ D V+NV PRY+ L
Sbjct: 10 GIRSPNPFWLASAPPTDKEVNVTRAFEAGWGGVVWKTLGEDP-HVVNVNGPRYSTLM--- 65
Query: 112 NGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDR 171
S ++IG NIELI+DRPL L+E +++K +PD+ +I SIM + +W+ ++
Sbjct: 66 --SQDRRVIGLNNIELITDRPLAVNLEEIRRVKRTWPDRAMIVSIMVPCVEESWKRILPM 123
Query: 172 VEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITD 231
VE+TG D IE+NF CPHGM ER MGAAVGQ ++ V W +PV K+TPNITD
Sbjct: 124 VEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIQMVTQWCKHYTHLPVIVKLTPNITD 183
Query: 232 ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGK 291
+ +PAR A G++ VS INTI S+MG+DL + P G + GGY AV PIAL
Sbjct: 184 VRQPARAARAGGADAVSLINTINSIMGVDLDRMAMSPNTGGQGSHGGYCGPAVKPIALNM 243
Query: 292 VMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351
V IA+ ++ +SGIGGV T DAAEFI LG TVQVCT M++G+ +V+ +C
Sbjct: 244 VAEIARDEQT----AGLPISGIGGVSTWRDAAEFIALGCGTVQVCTAAMVYGFKIVQDMC 299
Query: 352 EELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
L +FM H + +IEDFRG ++ +L + + I Q ++ G
Sbjct: 300 GGLSNFMDAHGYRTIEDFRGGAVPTVKDWKQLDLNHIDKAVINQDACIQCG 350
>gi|15595636|ref|NP_249130.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa PAO1]
gi|9946297|gb|AAG03828.1|AE004481_4 probable oxidoreductase [Pseudomonas aeruginosa PAO1]
Length = 425
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 208/352 (59%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RA+ GWG VV KT+ D A V NV+ RY+
Sbjct: 4 DLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLGEDPAAV-NVSSRYS 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ Q+ G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 63 -----AHFGPNRQVQGINNIELITDRSLEINLREIAQVKKDWPDRALIVSLMVPCVEESW 117
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W A ++PV K+
Sbjct: 118 KYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKAHCSLPVIVKL 177
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 178 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVALPVVGTQSTHGGYCGSAVK 237
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ + DAAEF+ LG VQVCT M+HG+
Sbjct: 238 PIALNMVAEIARDPQT----RGLPICGIGGIGSWRDAAEFVALGCGAVQVCTAAMLHGFR 293
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M H + + DF G ++ +Y + +++ R+ Q+A
Sbjct: 294 IVEDMQDGLARWMDSHGYQRLSDFSGGAVGNTTDWKYLDINYQVIARIDQDA 345
>gi|421520299|ref|ZP_15966965.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas putida LS46]
gi|402755853|gb|EJX16321.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas putida LS46]
Length = 424
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/333 (44%), Positives = 198/333 (59%), Gaps = 10/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ Q+ G NIELI+DR L+ L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGPNRQVQGINNIELITDRSLDINLREITQVKKDWPDRALIVSLMVPCIEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W +PV K+
Sbjct: 117 KFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTYCALPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVGDQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ DAAEF+ LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPET----RGLPICGIGGIGNWRDAAEFMALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +M H +IE FRG ++ + T
Sbjct: 293 IVEDMQDGLARWMDQHGHPTIEAFRGQAVGHTT 325
>gi|110634405|ref|YP_674613.1| dihydropyrimidine dehydrogenase [Chelativorans sp. BNC1]
gi|110285389|gb|ABG63448.1| dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine
dehydrogenase (NADP+) [Chelativorans sp. BNC1]
Length = 437
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 209/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+ G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DIRSNFLGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G+ NIELI+DR L L E KQ+K +PD+ LI S+M + A
Sbjct: 63 -----GAIWGADRRLLGFNNIELITDRDLYLNLTEIKQVKRNWPDRALIVSLMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEET D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETEADGIELNFGCPHGMSERGMGSAVGQVPEYVEMVVRWCKQHTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A G++ VS INTI S+ +DL + PEP ++ T GGY AV
Sbjct: 178 LTPNITDIRKPARAAHAGGTDAVSLINTINSITAVDLDSFAPEPTIDSKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ + +SGIGG+ T DAAEF+ LGA TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIARDPET----RGLPISGIGGITTWRDAAEFLALGAGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + E LK++M ++++D G ++ T + L + + I Q ++ G
Sbjct: 294 KIVEEMVEGLKNWMDEKGHATLDDIIGRAVPNVTDWQYLNLNYITKARIDQDLCIKCG 351
>gi|254503835|ref|ZP_05115986.1| dihydroorotate dehydrogenase family protein [Labrenzia alexandrii
DFL-11]
gi|222439906|gb|EEE46585.1| dihydroorotate dehydrogenase family protein [Labrenzia alexandrii
DFL-11]
Length = 437
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 209/358 (58%), Gaps = 13/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP + RAF GWG VV KT+ D V+NV PRY
Sbjct: 3 DLTTNFIGIKSPNPFWLASAPPTDKEYNVVRAFKAGWGGVVWKTLG-DGDPVVNVNGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA Q+IG NIELI+DRPLE L+E KQ+K +PD+ L+ S+M +
Sbjct: 62 -----GAIHGKDRQLIGLNNIELITDRPLEVNLREIKQVKRDWPDRALVVSLMVPCEEQN 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W +++ VE+T D +E+NF CPHGM ER MG+AVGQ +E V W+ + +P K
Sbjct: 117 WIDILKAVEDTEADGVELNFGCPHGMSERGMGSAVGQVPEYIEMVTRWVKKHSRMPCIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PA+ A G++ VS INTI S++G+DL + P P V+G GGY AV
Sbjct: 177 LTPNITDIRKPAQAAKAGGADAVSLINTINSIVGVDLDAMSPAPMVDGKGAHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +SGIGGV T DAAEF+ LGA +VQVCT M +G+
Sbjct: 237 KPIALNMVAEIARDPETH----GLPISGIGGVTTWRDAAEFMALGAGSVQVCTAAMTYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + E L D+M ++S++ G ++ + H L + + I Q ++ G
Sbjct: 293 KVVEDMIEGLSDWMDEKGYTSVDQVVGRAVPNASDWQHLNLNYIAKAKIDQDLCIQCG 350
>gi|148257287|ref|YP_001241872.1| dihydropyrimidine dehydrogenase [Bradyrhizobium sp. BTAi1]
gi|146409460|gb|ABQ37966.1| dihydrouracil dehydrogenase (NAD+) / dihydropyrimidine
dehydrogenase (NADP+) [Bradyrhizobium sp. BTAi1]
Length = 441
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/358 (40%), Positives = 208/358 (58%), Gaps = 13/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL + G+ PNPF + S PP + RAF GWG VV KT+ D ++NV+ PRY
Sbjct: 3 DLRTSFAGITSPNPFWLASAPPTDKAYNVVRAFKAGWGGVVWKTLGEDP-PIVNVSGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA + ++IG+ NIELI+DRPLE L+E Q+K +PD+ ++ S+M +
Sbjct: 62 -----GAIHGSDRRVIGFNNIELITDRPLEVNLQEITQVKRDWPDRAVVVSLMVPCQEPN 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W +I RVE+TG D +E+NF CPHGM ER MGAAVGQ +E V W A +PV K
Sbjct: 117 WTAIIKRVEQTGADGVELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWCKAATRMPVIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN+ I PA A R G++ VS INT+ ++MG+D+ + P P ++GY T GG V
Sbjct: 177 LTPNVASILPPAEAAKRGGADAVSLINTVNALMGVDIDQMAPWPHIDGYGTHGGMCGSVV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V +IA+ ++ +SGIGG+E DAAEF+ LGA VQVCT M++G+
Sbjct: 237 KPIALNMVSAIARHPATQ----GLPISGIGGIEKWRDAAEFMALGAVNVQVCTAAMVYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L ++M ++ EDF G ++ T H L + + I Q ++ G
Sbjct: 293 KIVEEMIAGLSEWMDQKGYARPEDFVGRAVPRKTEWQHLNLDYVVKAHIDQDLCIKCG 350
>gi|402702649|ref|ZP_10850628.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas fragi A22]
Length = 424
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 198/329 (60%), Gaps = 10/329 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RA++ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAYEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + AW
Sbjct: 62 -----AHFGPNREVMGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCEEQAW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W ++PV K+
Sbjct: 117 KYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITD+ AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDVRLSARAAHRGGADAVSLINTINSITSVDLERMVALPMVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ + DAAEFI LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQT----RGLPICGIGGIGSWRDAAEFIALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+V + + L +M ++S+EDF G ++
Sbjct: 293 IVDEMKDGLSRWMDSQGYTSLEDFSGRAV 321
>gi|114766788|ref|ZP_01445722.1| dihydropyrimidine dehydrogenase [Pelagibaca bermudensis HTCC2601]
gi|114540982|gb|EAU44040.1| dihydropyrimidine dehydrogenase [Roseovarius sp. HTCC2601]
Length = 434
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 203/358 (56%), Gaps = 13/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ V+NV PRY
Sbjct: 3 DLTSNFIGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEQGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K +K YPD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRPLEVNLREMKSVKRDYPDRALIASIMVPCTEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D +E+NF CPHGM ER MG+AVGQ +E V W+ +P K
Sbjct: 118 WKAILPLVEETGADGVELNFGCPHGMSERGMGSAVGQVPEYIEMVTRWVKQYTRMPCIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PA A G++ VS INTI S+ +DL PEP ++G GGY AV
Sbjct: 178 LTPNITDIRKPAMAAHAGGADAVSLINTINSITSVDLDLFAPEPTIDGKGAHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + + +SGIGGV T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIALNMVSEIARSPEM----RGLPISGIGGVTTWKDAAEFMALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L ++ S+ D G ++ + H L + + I Q + G
Sbjct: 294 KIVQEMISGLSQYLDEKEI-SLSDLVGRAVPNVSDWQHLNLNYVSKAKIDQELCISCG 350
>gi|373957954|ref|ZP_09617914.1| dihydroorotate dehydrogenase family protein [Mucilaginibacter
paludis DSM 18603]
gi|373894554|gb|EHQ30451.1| dihydroorotate dehydrogenase family protein [Mucilaginibacter
paludis DSM 18603]
Length = 422
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 213/358 (59%), Gaps = 14/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S G++ PNPF + S PP + RAF+ GWG VV KT+ +V NV+ RY+
Sbjct: 3 DISSDFLGIKSPNPFWLASAPPTDKKINVLRAFEAGWGGVVWKTL---GTQVKNVSSRYS 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ +GS +++G+ NIELISDRPL L E K++ +PD+ ++ S+M + + +W
Sbjct: 60 AVDY--HGS---RVMGFNNIELISDRPLAINLTEIKEVLKEFPDRAMVVSLMADNTRESW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
ELI +V++TG +E+NF CPHGM ER MGAAVGQD + V W+ A +PV K+
Sbjct: 115 HELIKQVQDTGAHGLELNFGCPHGMTERGMGAAVGQDPEIARMVVEWVMEVAQIPVITKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+ + ++ G+ +S INTI SV GIDL TL P P V G S GGY AV
Sbjct: 175 TPNVHSVVPTGLASVLGGTNALSLINTIQSVTGIDLDTLIPNPNVGGKSAFGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +I+ ++E + +SGIGG+ T DA EF+LLGA+ VQVCT VM HG+
Sbjct: 235 PIALKMLTTIS---QNEIT-RRVPVSGIGGISTWKDAVEFMLLGASNVQVCTAVMKHGFR 290
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL-VRMQQEA-IQQRKAVRKGL 401
+++ LCE L +M F+++ DF G SI + +L + A I Q K V GL
Sbjct: 291 IIEDLCEGLSYWMDDKGFNTLNDFIGKSIPAMSNWEDLDINYHVIANINQDKCVHCGL 348
>gi|365899213|ref|ZP_09437130.1| putative FMN-linked oxidoreductase; dihydropyrimidine/dihydroorate
dehydrogenase [Bradyrhizobium sp. STM 3843]
gi|365420014|emb|CCE09672.1| putative FMN-linked oxidoreductase; dihydropyrimidine/dihydroorate
dehydrogenase [Bradyrhizobium sp. STM 3843]
Length = 441
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 142/327 (43%), Positives = 196/327 (59%), Gaps = 11/327 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL + G+ PNPF + S PP + RAF GWG VV KT+ D ++NV+ PRY
Sbjct: 3 DLRSSFAGITSPNPFWLASAPPTDKAYNVIRAFKAGWGGVVWKTLGEDP-PIVNVSGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA + ++IG+ NIELI+DRPLE L+E Q+K +PD+ ++ S+M +
Sbjct: 62 -----GAIHGSDRRVIGFNNIELITDRPLEVNLQEITQVKRDWPDRAVVVSLMVPCEEPN 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W +I RVEETG D IE+NF CPHGM ER MGAAVGQ +E V W A +PV K
Sbjct: 117 WTAIIKRVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWCKAATRMPVIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN+ I PA A R G++ VS INT+ ++MG+D+ + P P ++GY T GG V
Sbjct: 177 LTPNVASILPPAEAAKRGGADAVSLINTVNALMGVDIDQMAPWPHIDGYGTHGGMCGSVV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V +IA+ ++ +SGIGG+E DAAEF+ LGA VQVCT M +G+
Sbjct: 237 KPIALNMVSAIARHPATQ----GLPISGIGGIEKWRDAAEFMALGAVNVQVCTAAMAYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + +L ++M ++ EDF G
Sbjct: 293 KIVEEMIADLSEWMDQKGYARTEDFVG 319
>gi|359395079|ref|ZP_09188132.1| hypothetical protein KUC_1730 [Halomonas boliviensis LC1]
gi|357972326|gb|EHJ94771.1| hypothetical protein KUC_1730 [Halomonas boliviensis LC1]
Length = 447
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 151/347 (43%), Positives = 203/347 (58%), Gaps = 10/347 (2%)
Query: 37 ASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAK 96
+ DS DLS+ G++ PNPF + S PP + RA++ GWG VV KT+ +
Sbjct: 17 SGDSVVNGVDLSVNFAGIKAPNPFWLASAPPTDKAYNVVRAYEAGWGGVVWKTLG-EEPP 75
Query: 97 VINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI 156
+NV+ RY+ A+ ++IG+ NIELI+DR LE LKE Q+K +PD+ LI SI
Sbjct: 76 AVNVSSRYS-----AHYGKNREVIGFNNIELITDRSLEINLKEITQVKKDWPDRALIVSI 130
Query: 157 MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK 216
M N+ AW ++ VE TG D IE+N CPHGMPER MGAAVGQ+ L+E+V W
Sbjct: 131 MVPCNEEAWAYILPLVEATGADGIELNLGCPHGMPERGMGAAVGQNPDLIEKVTYWCKKH 190
Query: 217 ATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTP 276
+ PV K+TPNITDI A+ ALR G++ VS INTI S+ IDL + +P V ST
Sbjct: 191 YSKPVIVKLTPNITDIRVGAQAALRGGADAVSLINTINSITSIDLDNMVAKPTVGHQSTH 250
Query: 277 GGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336
GGY AV PIA+ V IA+ + +SGIGG+ DAAEFI LGA +VQVC
Sbjct: 251 GGYCGSAVKPIAMNMVAEIAR----DPATPTLPISGIGGISCWRDAAEFIALGAGSVQVC 306
Query: 337 TGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
T M++G+ +V+ + + L +M + SIE F +I T L
Sbjct: 307 TAAMLNGFRIVEEMKDGLSRWMAEKGYDSIEAFSRKAIPQTTDWKHL 353
>gi|121611067|ref|YP_998874.1| dihydropyrimidine dehydrogenase [Verminephrobacter eiseniae EF01-2]
gi|121555707|gb|ABM59856.1| dihydroorotate dehydrogenase family protein [Verminephrobacter
eiseniae EF01-2]
Length = 436
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 212/358 (59%), Gaps = 13/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G+ PNPF + S PP + RAF+ GWG VV KT+ D A V+NV PRY
Sbjct: 3 DLRSRFLGIASPNPFWLASAPPTDKEINVTRAFEAGWGGVVWKTLGEDPA-VVNVNGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
A L S ++IG NIELI+DRPL T L E +++K +P + LI S+M +
Sbjct: 62 ATLM-----SQDRRVIGLNNIELITDRPLHTNLAEIRRVKRRWPGRALIVSLMVACEELR 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ +VE+TG D +E+NF CPHGM ER MGAAVGQ + V W + +PV K
Sbjct: 117 WKNILAQVEDTGADGVELNFGCPHGMSERGMGAAVGQVPEYITLVTAWCKHYSRLPVIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ + AR A G++ VS INTI SVMG+DL+ ++ P +G+ + GGY AV
Sbjct: 177 LTPNITDVRQAARAARAGGADAVSLINTINSVMGVDLERMQMIPSTDGWGSHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + LSGIGG+ T DAA+FI LG +TVQVCT M++G+
Sbjct: 237 LPIALHMVAEIAR----DAPTAGLPLSGIGGIGTWRDAAQFIALGCSTVQVCTAAMVYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ +C+ L +FM H + + +DF+G ++ L +++ I Q +R G
Sbjct: 293 KIVQDMCDGLSNFMDRHGYRTTQDFKGQALPSVKDWKQLNLNHIEKAVIDQAACIRCG 350
>gi|107099425|ref|ZP_01363343.1| hypothetical protein PaerPA_01000437 [Pseudomonas aeruginosa PACS2]
gi|313111935|ref|ZP_07797724.1| putative dihydroorotate dehydrogenase [Pseudomonas aeruginosa
39016]
gi|386056508|ref|YP_005973030.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa M18]
gi|386068650|ref|YP_005983954.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa NCGM2.S1]
gi|392981851|ref|YP_006480438.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
DK2]
gi|416856288|ref|ZP_11911932.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
138244]
gi|419755921|ref|ZP_14282273.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
PADK2_CF510]
gi|310884226|gb|EFQ42820.1| putative dihydroorotate dehydrogenase [Pseudomonas aeruginosa
39016]
gi|334842163|gb|EGM20776.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
138244]
gi|347302814|gb|AEO72928.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa M18]
gi|348037209|dbj|BAK92569.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa NCGM2.S1]
gi|384397583|gb|EIE43994.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
PADK2_CF510]
gi|392317356|gb|AFM62736.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
DK2]
gi|453045819|gb|EME93537.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
PA21_ST175]
Length = 424
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 207/352 (58%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RA+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ Q+ G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGPNRQVQGINNIELITDRSLEINLREIAQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W ++PV K+
Sbjct: 117 KYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTHCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVALPVVGTQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ + DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQT----RGLPICGIGGIGSWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M H + + DF G ++ +Y + +++ R+ Q+A
Sbjct: 293 IVEDMQDGLARWMDSHGYQRLSDFSGGAVGNTTDWKYLDINYQVIARIDQDA 344
>gi|116054170|ref|YP_788613.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa UCBPP-PA14]
gi|254237329|ref|ZP_04930652.1| hypothetical protein PACG_03400 [Pseudomonas aeruginosa C3719]
gi|254243537|ref|ZP_04936859.1| hypothetical protein PA2G_04355 [Pseudomonas aeruginosa 2192]
gi|420137021|ref|ZP_14645024.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa CIG1]
gi|421151506|ref|ZP_15611119.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa ATCC 14886]
gi|421157454|ref|ZP_15616827.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa ATCC 25324]
gi|421165306|ref|ZP_15623642.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa ATCC
700888]
gi|421172160|ref|ZP_15629940.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa CI27]
gi|421178349|ref|ZP_15635964.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa E2]
gi|115589391|gb|ABJ15406.1| putative dihydroorotate dehydrogenase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126169260|gb|EAZ54771.1| hypothetical protein PACG_03400 [Pseudomonas aeruginosa C3719]
gi|126196915|gb|EAZ60978.1| hypothetical protein PA2G_04355 [Pseudomonas aeruginosa 2192]
gi|403250221|gb|EJY63674.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa CIG1]
gi|404527262|gb|EKA37431.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa ATCC 14886]
gi|404538387|gb|EKA47930.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa CI27]
gi|404542279|gb|EKA51605.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa ATCC
700888]
gi|404548679|gb|EKA57626.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa E2]
gi|404550606|gb|EKA59339.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa ATCC 25324]
Length = 425
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 207/352 (58%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RA+ GWG VV KT+ D A V NV+ RY+
Sbjct: 4 DLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLGEDPAAV-NVSSRYS 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ Q+ G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 63 -----AHFGPNRQVQGINNIELITDRSLEINLREIAQVKKDWPDRALIVSLMVPCVEESW 117
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W ++PV K+
Sbjct: 118 KYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTHCSLPVIVKL 177
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 178 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVALPVVGTQSTHGGYCGSAVK 237
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ + DAAEF+ LG VQVCT M+HG+
Sbjct: 238 PIALNMVAEIARDPQT----RGLPICGIGGIGSWRDAAEFVALGCGAVQVCTAAMLHGFR 293
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M H + + DF G ++ +Y + +++ R+ Q+A
Sbjct: 294 IVEDMQDGLARWMDSHGYQRLSDFSGGAVGNTTDWKYLDINYQVIARIDQDA 345
>gi|254486347|ref|ZP_05099552.1| dihydroorotate dehydrogenase family protein [Roseobacter sp.
GAI101]
gi|214043216|gb|EEB83854.1| dihydroorotate dehydrogenase family protein [Roseobacter sp.
GAI101]
Length = 425
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 143/332 (43%), Positives = 197/332 (59%), Gaps = 11/332 (3%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRYARLRAGA 111
G++ PNPF + S PP ++RAF+ GWG VV KT+ +D V+NV PRY GA
Sbjct: 2 GIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGIDP-PVVNVNGPRY-----GA 55
Query: 112 NGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDR 171
A +++G NIELI+DRPL L+E K +K YPD+ ++ S+M + W+ ++
Sbjct: 56 IYGADRRLLGLNNIELITDRPLAQNLQEIKSVKRDYPDRAMVVSLMVPCEEEPWKYILPL 115
Query: 172 VEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITD 231
VEETG D +E+NF CPHGM ER MGAAVGQ +E V W+ A +PV K+TPNI D
Sbjct: 116 VEETGADGVELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWVKASTRMPVIVKLTPNIAD 175
Query: 232 ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGK 291
I +PA ALR G++ VS INTI S+ +DL PEP ++G GGY AV PIAL
Sbjct: 176 IRKPAEAALRGGADAVSLINTINSITSVDLDLFAPEPTIDGKGAHGGYCGPAVKPIALNM 235
Query: 292 VMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351
V IA+ + +SGIGGV T DAAEF+ LGA VQVCT VM +G+ +V+ +
Sbjct: 236 VAEIAR----DPGLSQVPISGIGGVTTWRDAAEFMALGAGNVQVCTAVMTYGFKIVQEMI 291
Query: 352 EELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
L +++ +S++ ++ T +L
Sbjct: 292 SGLSEYLDDKGMTSVDQLVRRAVPNVTDWNQL 323
>gi|347817716|ref|ZP_08871150.1| dihydropyrimidine dehydrogenase subunit B [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 441
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 150/359 (41%), Positives = 215/359 (59%), Gaps = 15/359 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+ G++ PNPF + S PP + RAF+ GWG VV KT+ D ++NV PRY
Sbjct: 3 DIRSNFLGIRSPNPFWLASAPPTDKEINVTRAFEAGWGGVVWKTLGEDP-PIVNVNGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
A L A ++IG NIELI+DRPL T L+E +++K +PD+ L+ S+M +
Sbjct: 62 ATLMA-----QDRRVIGLNNIELITDRPLHTNLQEIRRVKRSWPDRALLVSLMVPCEEQG 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ +VE+TG D +E+NF CPHGM ER MG+AVGQ + V W + +PV K
Sbjct: 117 WKRILAQVEDTGADGVELNFGCPHGMSERGMGSAVGQVPEYIRMVTAWCKHHSRLPVVVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN+TD+ PAR A G++ VS INTI SVMG+DL + P G + GGY AV
Sbjct: 177 LTPNVTDVRLPARAARAGGADAVSLINTINSVMGVDLDRMVMLPSTAGQGSHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ D LSGIGGV DAAE+I LG TVQVCT M++G+
Sbjct: 237 KPIALNMVAEIARDART----ADLPLSGIGGVGNWRDAAEYIALGCGTVQVCTAAMVYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRG---ASIEYFTTHTELVRMQQEAIQQRKAVRKG 400
+V+ +C+ L +FM +++++DFRG AS+ + + +L +++ I Q +R G
Sbjct: 293 RIVQDMCDGLSNFMDEQGYATLDDFRGRALASVRDWQS-LDLGHVEKALIDQDACIRCG 350
>gi|355646770|ref|ZP_09054605.1| hypothetical protein HMPREF1030_03691 [Pseudomonas sp. 2_1_26]
gi|354828309|gb|EHF12432.1| hypothetical protein HMPREF1030_03691 [Pseudomonas sp. 2_1_26]
Length = 424
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 207/352 (58%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RA+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ Q+ G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGPNRQVQGINNIELITDRSLEINLREIAQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W ++PV K+
Sbjct: 117 KYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTHCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVALPVVGTQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ + DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQT----RGLPICGIGGIGSWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M H + + DF G ++ +Y + +++ R+ Q+A
Sbjct: 293 IVEDMQDGLARWMDSHGYQRLSDFSGGAVGNTTDWKYLDINYQVIARIDQDA 344
>gi|218889181|ref|YP_002438045.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa LESB58]
gi|218769404|emb|CAW25164.1| probable oxidoreductase [Pseudomonas aeruginosa LESB58]
Length = 425
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 207/352 (58%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RA+ GWG VV KT+ D A V NV+ RY+
Sbjct: 4 DLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLGEDPAAV-NVSSRYS 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ Q+ G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 63 -----AHFGPNRQVQGINNIELITDRSLEINLREIAQVKKDWPDRALIVSLMVPCVEESW 117
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W ++PV K+
Sbjct: 118 KYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTHCSLPVIVKL 177
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 178 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVALPVVGTQSTHGGYCGSAVK 237
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ + DAAEF+ LG VQVCT M+HG+
Sbjct: 238 PIALNMVAEIARDPQT----RGLPICGIGGIGSWRDAAEFVALGCGAVQVCTAAMLHGFR 293
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M H + + DF G ++ +Y + +++ R+ Q+A
Sbjct: 294 IVEDMQDGLARWMDSHGYERLSDFSGGAVGNTTDWKYLDINYQVIARIDQDA 345
>gi|169827564|ref|YP_001697722.1| dihydropyrimidine dehydrogenase [Lysinibacillus sphaericus C3-41]
gi|168992052|gb|ACA39592.1| dihydropyrimidine dehydrogenase [Lysinibacillus sphaericus C3-41]
Length = 420
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 143/339 (42%), Positives = 199/339 (58%), Gaps = 15/339 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL I + G+Q PNPF + S PP + ++RAF+ GWG V KT+ ++NV+ R+A
Sbjct: 3 DLRINLAGIQSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GEPILNVSSRFA 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ + G+ NIELI+DRPLE L+E + K +P +IAS+M E +
Sbjct: 60 AV------SYNGQRVAGFNNIELITDRPLEVNLQEIYETKKKFPHHAIIASLMVEPKQEK 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ RVE+ G+D +E+NF CPHGM ER MG+A GQ L+E+ W+ A PV K
Sbjct: 114 WHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVEKQTYWVKEAARTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT A A R G++ VS INTI S+ G+DL T P V G GGY AV
Sbjct: 174 LTPNITDITVTAEAATRGGADAVSMINTINSLAGVDLDTWNTVPHVAGKGAHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V A+ + +SGIGG+ DAAEFIL+GA VQVCT M HG+
Sbjct: 234 KPIALNMVAECARNPLV-----NVPISGIGGISNWQDAAEFILMGATGVQVCTAAMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + + L +++ +S+ D G S+ ++ +L
Sbjct: 289 SIVEDMIDGLNNYLDDKGLASVMDLVGRSVSRYSNWGDL 327
>gi|431803361|ref|YP_007230264.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas putida
HB3267]
gi|430794126|gb|AGA74321.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas putida
HB3267]
Length = 424
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 147/333 (44%), Positives = 199/333 (59%), Gaps = 10/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIEFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ Q+ G NIELI+DR L+ L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGPNRQVQGINNIELITDRSLDINLREITQVKKDWPDRALIVSLMVPCVEDSW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W ++PV K+
Sbjct: 117 KFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVGDQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + GIGG+ + DAAEF+ LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQT----LGLPICGIGGIGSWRDAAEFMALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +M H +IE FRG ++ + T
Sbjct: 293 IVEDMKDGLARWMDQHGHPNIEAFRGQAVGHTT 325
>gi|296386938|ref|ZP_06876437.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa PAb1]
gi|416874963|ref|ZP_11918456.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
152504]
gi|334842516|gb|EGM21122.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
152504]
Length = 424
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 206/352 (58%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RA+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ Q+ G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGPNRQVQGINNIELITDRSLEINLREIAQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W ++PV K+
Sbjct: 117 KYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTHCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVALPVVGTQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQT----RGLPICGIGGIGNWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M H + + DF G ++ +Y + +++ R+ Q+A
Sbjct: 293 IVEDMQDGLARWMDSHGYQRLSDFSGGAVGNTTDWKYLDINYQVIARIDQDA 344
>gi|407798628|ref|ZP_11145535.1| dihydropyrimidine dehydrogenase [Oceaniovalibus guishaninsula
JLT2003]
gi|407059589|gb|EKE45518.1| dihydropyrimidine dehydrogenase [Oceaniovalibus guishaninsula
JLT2003]
Length = 432
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 209/358 (58%), Gaps = 14/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP + RAF GWG VV KT+ LD ++NV PRY
Sbjct: 3 DLATNFVGIRSPNPFWLASAPPTDKEYNVVRAFRAGWGGVVWKTLGLDP-HIVNVNGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
G A +++G NIELI+DRPL+ L+E K++K +PD+ ++ S+M + A
Sbjct: 62 -----GVVYGADRRVLGLNNIELITDRPLDVNLREIKKVKRDWPDRAMVVSLMVPCEEWA 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W++++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 117 WKQILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVTRWCKQNTRMPVLVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ PAR A G++GVS INTI S+ ++L PEP ++G + GGY AV
Sbjct: 177 LTPNITDVRYPARAAKAGGADGVSLINTISSITSVNLDDWSPEPSIDGKGSHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +SGIGGV T DAAEFI LGA +VQVCT M +G+
Sbjct: 237 KPIALNMVAEIARDAET----LGLPISGIGGVTTWRDAAEFIALGAGSVQVCTAAMTYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTT--HTELVRMQQEAIQQRKAVRKG 400
+V+ + L ++ S++D RG ++ T + L + + I Q ++ G
Sbjct: 293 KIVQEMVSGLSQYLDEKGM-SLDDLRGRAVPNVTDWRYLNLNYVTKARIDQDLCIKCG 349
>gi|451988176|ref|ZP_21936315.1| Dihydropyrimidine dehydrogenase [NADP+] [Pseudomonas aeruginosa
18A]
gi|451754152|emb|CCQ88838.1| Dihydropyrimidine dehydrogenase [NADP+] [Pseudomonas aeruginosa
18A]
Length = 424
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 206/352 (58%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RA+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ Q+ G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGPNRQVQGINNIELITDRSLEINLREIAQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W ++PV K+
Sbjct: 117 KYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTHCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLERMVALPVVGTQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQT----RGLPICGIGGIGNWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M H + + DF G ++ +Y + +++ R+ Q+A
Sbjct: 293 IVEDMQDGLARWMDSHGYQRLSDFSGGAVGNTTDWKYLDINYQVIARIDQDA 344
>gi|433774633|ref|YP_007305100.1| dihydroorotate dehydrogenase family protein [Mesorhizobium
australicum WSM2073]
gi|433666648|gb|AGB45724.1| dihydroorotate dehydrogenase family protein [Mesorhizobium
australicum WSM2073]
Length = 437
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 207/358 (57%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+ G++ PNPF + S PP + RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DIRNNFVGIKSPNPFWLASAPPTDKAYNVIRAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L+T L+E KQ+K +PD+ LIASIM + +
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLQTNLREMKQVKMDWPDRALIASIMVPCVEES 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ +E V W +PV K
Sbjct: 118 WKSILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVRWCKQYTRMPVVTK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNI DI +PAR A G++ VS INTI S+ G+DL + P P ++G + GGY AV
Sbjct: 178 LTPNIADIRKPARAAHAGGTDAVSLINTINSITGVDLDSFAPMPTIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V IA+ + + +SGIGG+ T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIAMNMVAEIAR----DPETRGLPISGIGGITTWRDAAEFMALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L+++M S++D G + T + L + + I Q ++ G
Sbjct: 294 KIVQEMIAGLENWMDEKGHRSLDDIIGRATPNVTDWQYLNLNYVAKAHIDQDACIKCG 351
>gi|159043912|ref|YP_001532706.1| dihydropyrimidine dehydrogenase [Dinoroseobacter shibae DFL 12]
gi|157911672|gb|ABV93105.1| dihydroorotate dehydrogenase family protein [Dinoroseobacter shibae
DFL 12]
Length = 432
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 208/358 (58%), Gaps = 14/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF+ GWG VV KT+ D V+NV PRY
Sbjct: 3 DLRSDFVGVKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGFDP-HVVNVNGPRY 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E KQ+K YPD+ ++ S+M +
Sbjct: 62 -----GAVWGADRRLLGLNNIELITDRPLEVNLREIKQVKRDYPDRAMVVSLMVPCEEDP 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W++++ VEETG DA+E+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 117 WKKILPLVEETGADAVELNFGCPHGMSERGMGSAVGQVPEYIEMVARWCKQHTRMPVIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A G++ VS INTI S+ ++L + PEP ++G + GGY AV
Sbjct: 177 LTPNITDIRYPARAAHAGGADAVSLINTISSITSVNLDSFSPEPSIDGKGSHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +SGIGGV T DAAEF+ LGA VQVCT M +G+
Sbjct: 237 KPIALNMVAEIARDAET----AGMPISGIGGVTTWRDAAEFLALGAGNVQVCTAAMTYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L ++ + +++D G + T + L + + I Q ++ G
Sbjct: 293 KVVQEMISGLSQYLDEKDM-TLDDLIGRATPNVTDWQYLNLNYVTKARIDQDSCIKCG 349
>gi|420243014|ref|ZP_14746988.1| dihydroorotate dehydrogenase family protein [Rhizobium sp. CF080]
gi|398064249|gb|EJL55940.1| dihydroorotate dehydrogenase family protein [Rhizobium sp. CF080]
Length = 437
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 207/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+ G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DIRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E K++K +PD+ ++ASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYTNLREMKEVKKNWPDRAIVASIMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEET +D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETEVDGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNI+DI PAR A R G++ VS INTI S++ +DL T P P V G + GGY AV
Sbjct: 178 LTPNISDIRHPARAAKRGGTDAVSLINTISSIVSVDLDTFSPNPSVGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEF+ LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGITTWRDAAEFLALGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M S++D ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMITGLSDWMDEKGHRSLDDIICRAVPNVTDWQYLNLNYIAKAHIDQDACIKCG 351
>gi|126651249|ref|ZP_01723459.1| dihydropyrimidine dehydrogenase [Bacillus sp. B14905]
gi|126592087|gb|EAZ86153.1| dihydropyrimidine dehydrogenase [Bacillus sp. B14905]
Length = 427
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 200/339 (58%), Gaps = 15/339 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL I + G+Q PNPF + S PP + ++RAF+ GWG V KT+ ++NV+ R+A
Sbjct: 10 DLRINLAGIQSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GDPILNVSSRFA 66
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ + G+ NIELI+DRPLE L+E + K +P+ +IAS+M E +
Sbjct: 67 AV------SFNGQRVAGFNNIELITDRPLEVNLQEIYETKKKFPNHAIIASLMVEPKQEK 120
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ RVE+ G+D +E+NF CPHGM ER MG+A GQ L+E+ W+ A PV K
Sbjct: 121 WHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVEKQTYWVKEAARTPVIVK 180
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT A A R G++ +S INTI S+ G+DL T P V G GGY AV
Sbjct: 181 LTPNITDITVTAEAAKRGGADAISMINTINSLAGVDLDTWNTVPHVAGKGAHGGYCGPAV 240
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V A+ + +SGIGG+ DAAEFIL+GA VQVCT M HG+
Sbjct: 241 KPIALNMVAECARNPLV-----NVPISGIGGISNWQDAAEFILMGATGVQVCTAAMHHGF 295
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + + L +++ +S+ D G S+ ++ +L
Sbjct: 296 SIVEDMIDGLNNYLDDKGLASVMDLVGRSVSRYSNWGDL 334
>gi|445495121|ref|ZP_21462165.1| NAD-dependent dihydropyrimidine dehydrogenase YeiA
[Janthinobacterium sp. HH01]
gi|444791282|gb|ELX12829.1| NAD-dependent dihydropyrimidine dehydrogenase YeiA
[Janthinobacterium sp. HH01]
Length = 431
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/348 (42%), Positives = 204/348 (58%), Gaps = 11/348 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIEFCGIKSINPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ +++G+ NIELI+DR LE L E Q+K +PD+++I S+M + W
Sbjct: 62 -----AHYGKNREVLGFNNIELITDRSLEINLTEITQVKKDWPDRVIIVSLMLPCEEKLW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W + +PV K+
Sbjct: 117 ADILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTHSKLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITD+ PAR A G++ VS INTI S+ +DL + P V G ST GGY AV
Sbjct: 177 TPNITDVRAPARAAKAGGADAVSLINTINSITHLDLDQMVAFPIVGGASTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ + K +SGIGG+ DAAEF+ LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIAR----DPQTKGLPISGIGGIGNWRDAAEFMALGSGCVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQ 393
+V+ + + L +M + SI +F G ++ TT + + M + I Q
Sbjct: 293 IVEEMKDGLSRWMDEKGYKSISEFVGKAVPN-TTDWKYLNMNYQVIAQ 339
>gi|395448345|ref|YP_006388598.1| dihydropyrimidine dehydrogenase [Pseudomonas putida ND6]
gi|388562342|gb|AFK71483.1| dihydropyrimidine dehydrogenase [Pseudomonas putida ND6]
Length = 424
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/333 (43%), Positives = 198/333 (59%), Gaps = 10/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ Q+ G NIELI+DR L+ L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGPNRQVQGINNIELITDRSLDINLREITQVKKDWPDRALIVSLMVPCIEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W +PV K+
Sbjct: 117 KFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTYCALPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVGDQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ DAAEF+ LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPET----RGLPICGIGGIGNWRDAAEFMALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +M ++IE FRG ++ + T
Sbjct: 293 IVEDMQDGLARWMDQQGHATIEAFRGQAVGHTT 325
>gi|152986422|ref|YP_001345936.1| dihydropyrimidine dehydrogenase [Pseudomonas aeruginosa PA7]
gi|452880696|ref|ZP_21957626.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
VRFPA01]
gi|150961580|gb|ABR83605.1| probable oxidoreductase [Pseudomonas aeruginosa PA7]
gi|452182914|gb|EME09932.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas aeruginosa
VRFPA01]
Length = 424
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 208/352 (59%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RA++ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIEFAGIKSPNPFWLASAPPTDKAYNVVRAYEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ Q+ G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGPNRQVQGINNIELITDRSLEINLREIAQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E V W ++PV K+
Sbjct: 117 KYILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTHCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI + AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRQSARAAQRGGADAVSLINTINSITSVDLERMVALPVVGTQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ + DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQT----RGLPICGIGGIGSWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M + + DF GA++ +Y + +++ R+ Q+A
Sbjct: 293 IVEDMQDGLARWMDSQGYQRLADFSGAAVGNTTDWKYLDINYQVIARIDQDA 344
>gi|222086790|ref|YP_002545324.1| dihydropyrimidine dehydrogenase [Agrobacterium radiobacter K84]
gi|398376912|ref|ZP_10535093.1| dihydroorotate dehydrogenase family protein [Rhizobium sp. AP16]
gi|221724238|gb|ACM27394.1| dihydroorotate oxidase protein [Agrobacterium radiobacter K84]
gi|397727384|gb|EJK87809.1| dihydroorotate dehydrogenase family protein [Rhizobium sp. AP16]
Length = 437
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 205/358 (57%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYTNLREMKQVKMNWPDRALIASIMVPCVEDA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ PAR A G++ VS INTI S++ +DL P P V G + GGY AV
Sbjct: 178 LTPNITDVRMPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ +++ +SGIGG+ T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIALNMVAEIARDPQTQ----GLPISGIGGITTWRDAAEFLALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L D+M +++D ++ + + L + + I Q ++ G
Sbjct: 294 KIVQEMITGLSDWMDEKGHRTLDDIIARAVPNVSDWQYLNLNYIAKAKIDQDACIKCG 351
>gi|415829157|ref|ZP_11515540.1| hypothetical protein ECOK1357_2501 [Escherichia coli OK1357]
gi|323184230|gb|EFZ69607.1| hypothetical protein ECOK1357_2501 [Escherichia coli OK1357]
Length = 411
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFV 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L +QLK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRQLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|357027536|ref|ZP_09089609.1| dihydropyrimidine dehydrogenase subunit B [Mesorhizobium amorphae
CCNWGS0123]
gi|355540516|gb|EHH09719.1| dihydropyrimidine dehydrogenase subunit B [Mesorhizobium amorphae
CCNWGS0123]
Length = 437
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 208/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+ G++ PNPF + S PP + RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DIRNNFVGIKSPNPFWLASAPPTDKAYNVIRAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L+ L+E KQ+K +PD+ ++ S+M + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLQVNLREIKQVKKDWPDRAIVVSLMVPCVEDA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEET D IE+NF CPHGM ER MGAAVGQ +E V W +PV K
Sbjct: 118 WKAILPVVEETEADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVRWCKQNTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PAR AL G++ VS INTI S+ G+DL + P+P ++G + GGY AV
Sbjct: 178 LTPNITDVRKPARAALSGGTDAVSLINTINSITGVDLDSFAPQPTIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V IA+ + + +SGIGG+ T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIAMNMVAEIAR----DPETRGLPISGIGGITTWRDAAEFMALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L+++M +S++D G + T + L + + I Q ++ G
Sbjct: 294 KIVQEMIAGLENWMDEKGHASLDDIVGRATPNVTDWQYLNLNYVAKAHIDQDACIKCG 351
>gi|386713946|ref|YP_006180269.1| dihydropyrimidine dehydrogenase [Halobacillus halophilus DSM 2266]
gi|384073502|emb|CCG44995.1| dihydropyrimidine dehydrogenase [Halobacillus halophilus DSM 2266]
Length = 428
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 201/333 (60%), Gaps = 13/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ + G++ PNPF + S PP + ++RAF+ GWG V KT+ ++NVT R+A
Sbjct: 3 DLSLNLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GEPILNVTSRFA 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ G NG ++ G+ NIELI+DRPLE L+E + K +P+ +IAS+M E + W
Sbjct: 60 AV--GFNGQ---KVAGFNNIELITDRPLEVNLREIYETKKRFPNHAIIASLMVEPTQEKW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ RVEE G+D +E+NF CPHGM ER MGAA GQ L+E+ W A PV K+
Sbjct: 115 HEIVKRVEEVGVDGLELNFGCPHGMAERGMGAASGQVPELVEKQTMWAKEVAETPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDIT A+ A+ G++ VS INTI S+ G+D+ T P V G GGY AV
Sbjct: 175 TPNITDITFTAQAAVNGGADAVSMINTINSLAGVDIDTWDTIPNVAGKGAHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V A+ K + +SG+GGV + +A EF+L+GA VQVCT M HG+
Sbjct: 235 PIALNMVAECARHPKI-----NVPISGMGGVSSWREAVEFMLMGATGVQVCTAAMHHGFS 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +++ S+ D G S+E ++
Sbjct: 290 IVEDMNDGLNNYLDEKGIDSVMDLVGKSVEKYS 322
>gi|332278699|ref|ZP_08391112.1| dihydropyrimidine dehydrogenase [Shigella sp. D9]
gi|332101051|gb|EGJ04397.1| dihydropyrimidine dehydrogenase [Shigella sp. D9]
Length = 413
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 7 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 64
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L +QLK YPDK+LIASIM E N+ W
Sbjct: 65 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRQLKEDYPDKVLIASIMGE-NEQQW 118
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 119 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 177
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 178 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 237
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 238 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 293
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 294 IVEDMASGLSHYLADQGFDSLQEMVG 319
>gi|260429222|ref|ZP_05783199.1| dihydroorotate dehydrogenase family protein [Citreicella sp. SE45]
gi|260419845|gb|EEX13098.1| dihydroorotate dehydrogenase family protein [Citreicella sp. SE45]
Length = 434
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 204/358 (56%), Gaps = 13/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DLS G++ PNPF + S PP ++RA++ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLSSNFIGIKSPNPFWLASAPPTDKEYNVRRAYEAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DRPLE L+E K +K YPD+ L+ASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRPLEVNLREMKSVKRDYPDRALVASIMVPCTEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VE+TG D +E+NF CPHGM ER MG+AVGQ +E V W+ +P K
Sbjct: 118 WKAILPLVEDTGADGVELNFGCPHGMSERGMGSAVGQVPEYIEMVTRWVKQYTRMPCIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PA A G++ VS INTI S+ +DL PEP ++G GGY AV
Sbjct: 178 LTPNITDIRKPAMAAHAGGADAVSLINTINSITSVDLDLFAPEPTIDGKGAHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + + +SGIGGV T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIALNMVAEIARSPEM----RGLPISGIGGVTTWKDAAEFMALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L ++ ++ D G ++ + H L + + I Q + G
Sbjct: 294 KVVQEMISGLSQYLDEKEI-ALSDLIGRAVPNVSDWQHLNLNYISKARIDQDACISCG 350
>gi|440227581|ref|YP_007334672.1| dihydroorotate dehydrogenase family protein [Rhizobium tropici CIAT
899]
gi|440039092|gb|AGB72126.1| dihydroorotate dehydrogenase family protein [Rhizobium tropici CIAT
899]
Length = 437
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 206/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYTNLREMKQVKKNWPDRALIASIMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEET D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETEADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A G++ VS INTI S++ +DL P P V G + GGY AV
Sbjct: 178 LTPNITDIRKPARAAKAGGTDAVSLINTINSIVSVDLDNFAPNPTVGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGG+ T DAAEF++LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DQETYGLPISGIGGITTWRDAAEFLVLGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M +++D ++ + + L + + I Q ++ G
Sbjct: 292 GFKIVEEMITGLSDWMDEKGHRTLDDVVARAVPNVSDWQYLNLNYIAKAKIDQDACIKCG 351
>gi|209919605|ref|YP_002293689.1| dihydropyrimidine dehydrogenase [Escherichia coli SE11]
gi|260856120|ref|YP_003230011.1| dihydropyrimidine dehydrogenase [Escherichia coli O26:H11 str.
11368]
gi|260868849|ref|YP_003235251.1| putative oxidoreductase [Escherichia coli O111:H- str. 11128]
gi|300822593|ref|ZP_07102731.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 119-7]
gi|300902204|ref|ZP_07120204.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 84-1]
gi|301306535|ref|ZP_07212599.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 124-1]
gi|309793025|ref|ZP_07687453.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 145-7]
gi|331668846|ref|ZP_08369694.1| putative oxidoreductase [Escherichia coli TA271]
gi|331678095|ref|ZP_08378770.1| putative oxidoreductase [Escherichia coli H591]
gi|407470039|ref|YP_006783518.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. 2009EL-2071]
gi|407481298|ref|YP_006778447.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. 2011C-3493]
gi|410481845|ref|YP_006769391.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. 2009EL-2050]
gi|415793524|ref|ZP_11496141.1| hypothetical protein ECEPECA14_5793 [Escherichia coli EPECa14]
gi|415823002|ref|ZP_11511521.1| hypothetical protein ECOK1180_4323 [Escherichia coli OK1180]
gi|415863774|ref|ZP_11536978.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 85-1]
gi|417155432|ref|ZP_11993561.1| dihydropyrimidine dehydrogenase [Escherichia coli 96.0497]
gi|417159553|ref|ZP_11996581.1| dihydropyrimidine dehydrogenase [Escherichia coli 99.0741]
gi|417192228|ref|ZP_12014328.1| dihydropyrimidine dehydrogenase [Escherichia coli 4.0522]
gi|417213639|ref|ZP_12022680.1| dihydropyrimidine dehydrogenase [Escherichia coli JB1-95]
gi|417223515|ref|ZP_12026955.1| dihydropyrimidine dehydrogenase [Escherichia coli 96.154]
gi|417237840|ref|ZP_12035571.1| dihydropyrimidine dehydrogenase [Escherichia coli 9.0111]
gi|417269706|ref|ZP_12057066.1| dihydropyrimidine dehydrogenase [Escherichia coli 3.3884]
gi|417298322|ref|ZP_12085561.1| dihydropyrimidine dehydrogenase [Escherichia coli 900105 (10e)]
gi|417581658|ref|ZP_12232460.1| hypothetical protein ECSTECB2F1_2322 [Escherichia coli STEC_B2F1]
gi|417592403|ref|ZP_12243100.1| hypothetical protein EC253486_3010 [Escherichia coli 2534-86]
gi|417597461|ref|ZP_12248103.1| hypothetical protein EC30301_2599 [Escherichia coli 3030-1]
gi|417602739|ref|ZP_12253309.1| hypothetical protein ECSTEC94C_2536 [Escherichia coli STEC_94C]
gi|417608776|ref|ZP_12259279.1| hypothetical protein ECSTECDG1313_3176 [Escherichia coli
STEC_DG131-3]
gi|417639880|ref|ZP_12290023.1| hypothetical protein ECTX1999_2588 [Escherichia coli TX1999]
gi|417667566|ref|ZP_12317111.1| hypothetical protein ECSTECO31_2375 [Escherichia coli STEC_O31]
gi|417805712|ref|ZP_12452661.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. LB226692]
gi|417833455|ref|ZP_12479903.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. 01-09591]
gi|417863527|ref|ZP_12508575.1| hypothetical protein C22711_0460 [Escherichia coli O104:H4 str.
C227-11]
gi|418945192|ref|ZP_13498095.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O157:H43 str. T22]
gi|419170802|ref|ZP_13714688.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC7A]
gi|419181441|ref|ZP_13725055.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC7C]
gi|419186886|ref|ZP_13730400.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC7D]
gi|419197605|ref|ZP_13740993.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC8A]
gi|419204156|ref|ZP_13747339.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC8B]
gi|419210299|ref|ZP_13753379.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC8C]
gi|419216195|ref|ZP_13759197.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC8D]
gi|419222133|ref|ZP_13765056.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC8E]
gi|419227334|ref|ZP_13770192.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9A]
gi|419233002|ref|ZP_13775779.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9B]
gi|419238398|ref|ZP_13781119.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9C]
gi|419243865|ref|ZP_13786504.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9D]
gi|419249691|ref|ZP_13792275.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9E]
gi|419255507|ref|ZP_13798026.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10A]
gi|419261707|ref|ZP_13804129.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10B]
gi|419267648|ref|ZP_13810003.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10C]
gi|419273238|ref|ZP_13815537.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10D]
gi|419278603|ref|ZP_13820852.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10E]
gi|419284748|ref|ZP_13826924.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10F]
gi|419381391|ref|ZP_13922342.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC14C]
gi|419386697|ref|ZP_13927575.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC14D]
gi|419392241|ref|ZP_13933053.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15A]
gi|419397281|ref|ZP_13938049.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15B]
gi|419402623|ref|ZP_13943347.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15C]
gi|419407742|ref|ZP_13948431.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15D]
gi|419413325|ref|ZP_13953977.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15E]
gi|419803766|ref|ZP_14328933.1| dihydropyrimidine dehydrogenase [Escherichia coli AI27]
gi|419862638|ref|ZP_14385232.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O103:H25 str. CVM9340]
gi|419875156|ref|ZP_14397036.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CVM9534]
gi|419885224|ref|ZP_14406012.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CVM9545]
gi|419886823|ref|ZP_14407447.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CVM9570]
gi|419895740|ref|ZP_14415525.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CVM9574]
gi|419902384|ref|ZP_14421610.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM9942]
gi|419906519|ref|ZP_14425420.1| putative oxidoreductase [Escherichia coli O26:H11 str. CVM10026]
gi|419950453|ref|ZP_14466666.1| dihydropyrimidine dehydrogenase [Escherichia coli CUMT8]
gi|420089808|ref|ZP_14601588.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CVM9602]
gi|420095669|ref|ZP_14607149.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CVM9634]
gi|420104266|ref|ZP_14614991.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CVM9455]
gi|420106402|ref|ZP_14616812.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CVM9553]
gi|420117943|ref|ZP_14627287.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM10021]
gi|420121046|ref|ZP_14630189.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM10030]
gi|420128136|ref|ZP_14636697.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM10224]
gi|420133233|ref|ZP_14641491.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM9952]
gi|420386193|ref|ZP_14885544.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli EPECa12]
gi|422351289|ref|ZP_16432111.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 117-3]
gi|422777440|ref|ZP_16831092.1| dihydroorotate dehydrogenase [Escherichia coli H120]
gi|422988273|ref|ZP_16979046.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
C227-11]
gi|422995164|ref|ZP_16985928.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
C236-11]
gi|423000239|ref|ZP_16990993.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
09-7901]
gi|423003908|ref|ZP_16994654.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
04-8351]
gi|423010481|ref|ZP_17001215.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-3677]
gi|423019708|ref|ZP_17010417.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-4404]
gi|423024875|ref|ZP_17015572.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-4522]
gi|423030696|ref|ZP_17021384.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-4623]
gi|423038522|ref|ZP_17029196.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C1]
gi|423043641|ref|ZP_17034308.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C2]
gi|423045370|ref|ZP_17036030.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C3]
gi|423053909|ref|ZP_17042716.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C4]
gi|423060884|ref|ZP_17049680.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C5]
gi|423706194|ref|ZP_17680577.1| dihydroorotate dehydrogenase [Escherichia coli B799]
gi|424749023|ref|ZP_18177145.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CFSAN001629]
gi|424761517|ref|ZP_18189089.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CFSAN001630]
gi|424772588|ref|ZP_18199682.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CFSAN001632]
gi|425380180|ref|ZP_18764220.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1865]
gi|429719753|ref|ZP_19254684.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429771635|ref|ZP_19303658.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02030]
gi|429781567|ref|ZP_19313496.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429785307|ref|ZP_19317205.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02092]
gi|429791196|ref|ZP_19323053.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02093]
gi|429797023|ref|ZP_19328831.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02281]
gi|429798621|ref|ZP_19330422.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02318]
gi|429807134|ref|ZP_19338861.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02913]
gi|429812034|ref|ZP_19343720.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-03439]
gi|429817554|ref|ZP_19349195.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-04080]
gi|429822765|ref|ZP_19354363.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-03943]
gi|429904145|ref|ZP_19370124.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429908282|ref|ZP_19374246.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429914153|ref|ZP_19380101.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429919184|ref|ZP_19385116.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429925003|ref|ZP_19390917.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429928940|ref|ZP_19394842.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429935479|ref|ZP_19401365.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429941159|ref|ZP_19407033.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429943839|ref|ZP_19409702.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429951439|ref|ZP_19417285.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429954751|ref|ZP_19420583.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432377318|ref|ZP_19620309.1| dihydroorotate dehydrogenase [Escherichia coli KTE12]
gi|432481520|ref|ZP_19723477.1| dihydroorotate dehydrogenase [Escherichia coli KTE210]
gi|432765544|ref|ZP_19999982.1| dihydroorotate dehydrogenase [Escherichia coli KTE48]
gi|432832178|ref|ZP_20065752.1| dihydroorotate dehydrogenase [Escherichia coli KTE135]
gi|432835137|ref|ZP_20068676.1| dihydroorotate dehydrogenase [Escherichia coli KTE136]
gi|432968257|ref|ZP_20157172.1| dihydroorotate dehydrogenase [Escherichia coli KTE203]
gi|433092539|ref|ZP_20278806.1| dihydroorotate dehydrogenase [Escherichia coli KTE138]
gi|433130719|ref|ZP_20316155.1| dihydroorotate dehydrogenase [Escherichia coli KTE163]
gi|433135381|ref|ZP_20320726.1| dihydroorotate dehydrogenase [Escherichia coli KTE166]
gi|209912864|dbj|BAG77938.1| putative dihydropyrimidine dehydrogenase [Escherichia coli SE11]
gi|257754769|dbj|BAI26271.1| predicted oxidoreductase [Escherichia coli O26:H11 str. 11368]
gi|257765205|dbj|BAI36700.1| predicted oxidoreductase [Escherichia coli O111:H- str. 11128]
gi|300405723|gb|EFJ89261.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 84-1]
gi|300524793|gb|EFK45862.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 119-7]
gi|300838236|gb|EFK65996.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 124-1]
gi|308123311|gb|EFO60573.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 145-7]
gi|315255341|gb|EFU35309.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 85-1]
gi|323152183|gb|EFZ38473.1| hypothetical protein ECEPECA14_5793 [Escherichia coli EPECa14]
gi|323176957|gb|EFZ62547.1| hypothetical protein ECOK1180_4323 [Escherichia coli OK1180]
gi|323944963|gb|EGB41028.1| dihydroorotate dehydrogenase [Escherichia coli H120]
gi|324020615|gb|EGB89834.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 117-3]
gi|331064040|gb|EGI35951.1| putative oxidoreductase [Escherichia coli TA271]
gi|331074555|gb|EGI45875.1| putative oxidoreductase [Escherichia coli H591]
gi|340734337|gb|EGR63467.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. 01-09591]
gi|340739624|gb|EGR73856.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. LB226692]
gi|341916816|gb|EGT66433.1| hypothetical protein C22711_0460 [Escherichia coli O104:H4 str.
C227-11]
gi|345337429|gb|EGW69861.1| hypothetical protein ECSTECB2F1_2322 [Escherichia coli STEC_B2F1]
gi|345338740|gb|EGW71167.1| hypothetical protein EC253486_3010 [Escherichia coli 2534-86]
gi|345350405|gb|EGW82680.1| hypothetical protein ECSTEC94C_2536 [Escherichia coli STEC_94C]
gi|345353746|gb|EGW85975.1| hypothetical protein EC30301_2599 [Escherichia coli 3030-1]
gi|345357985|gb|EGW90173.1| hypothetical protein ECSTECDG1313_3176 [Escherichia coli
STEC_DG131-3]
gi|345393372|gb|EGX23148.1| hypothetical protein ECTX1999_2588 [Escherichia coli TX1999]
gi|354861999|gb|EHF22437.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
C236-11]
gi|354867284|gb|EHF27706.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
C227-11]
gi|354869355|gb|EHF29765.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
04-8351]
gi|354873210|gb|EHF33587.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
09-7901]
gi|354879964|gb|EHF40300.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-3677]
gi|354889388|gb|EHF49637.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-4404]
gi|354892983|gb|EHF53187.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-4522]
gi|354895120|gb|EHF55309.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C1]
gi|354897394|gb|EHF57552.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-4623]
gi|354898755|gb|EHF58906.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C2]
gi|354912806|gb|EHF72804.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C5]
gi|354915811|gb|EHF75787.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C3]
gi|354917726|gb|EHF77688.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str. 11-4632
C4]
gi|375319492|gb|EHS65636.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O157:H43 str. T22]
gi|378014846|gb|EHV77743.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC7A]
gi|378023689|gb|EHV86361.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC7C]
gi|378028878|gb|EHV91494.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC7D]
gi|378047137|gb|EHW09509.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC8A]
gi|378048876|gb|EHW11229.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC8B]
gi|378054089|gb|EHW16375.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC8C]
gi|378062679|gb|EHW24856.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC8D]
gi|378065455|gb|EHW27600.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC8E]
gi|378074847|gb|EHW36876.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9A]
gi|378077529|gb|EHW39523.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9B]
gi|378084298|gb|EHW46210.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9C]
gi|378090943|gb|EHW52778.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9D]
gi|378095276|gb|EHW57064.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC9E]
gi|378100493|gb|EHW62189.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10A]
gi|378106756|gb|EHW68384.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10B]
gi|378111476|gb|EHW73060.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10C]
gi|378116695|gb|EHW78215.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10D]
gi|378128819|gb|EHW90200.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10E]
gi|378132002|gb|EHW93355.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC10F]
gi|378227758|gb|EHX87926.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC14C]
gi|378231224|gb|EHX91335.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC14D]
gi|378237441|gb|EHX97464.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15A]
gi|378243402|gb|EHY03348.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15B]
gi|378247157|gb|EHY07076.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15C]
gi|378254121|gb|EHY13985.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15D]
gi|378258757|gb|EHY18573.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC15E]
gi|384473165|gb|EIE57209.1| dihydropyrimidine dehydrogenase [Escherichia coli AI27]
gi|385712078|gb|EIG49033.1| dihydroorotate dehydrogenase [Escherichia coli B799]
gi|386168521|gb|EIH35037.1| dihydropyrimidine dehydrogenase [Escherichia coli 96.0497]
gi|386175004|gb|EIH46996.1| dihydropyrimidine dehydrogenase [Escherichia coli 99.0741]
gi|386191110|gb|EIH79856.1| dihydropyrimidine dehydrogenase [Escherichia coli 4.0522]
gi|386194335|gb|EIH88591.1| dihydropyrimidine dehydrogenase [Escherichia coli JB1-95]
gi|386203317|gb|EII02308.1| dihydropyrimidine dehydrogenase [Escherichia coli 96.154]
gi|386213618|gb|EII24043.1| dihydropyrimidine dehydrogenase [Escherichia coli 9.0111]
gi|386228511|gb|EII55867.1| dihydropyrimidine dehydrogenase [Escherichia coli 3.3884]
gi|386258002|gb|EIJ13484.1| dihydropyrimidine dehydrogenase [Escherichia coli 900105 (10e)]
gi|388344778|gb|EIL10602.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O103:H25 str. CVM9340]
gi|388349525|gb|EIL15003.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CVM9534]
gi|388350759|gb|EIL16085.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CVM9545]
gi|388360061|gb|EIL24308.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CVM9574]
gi|388364451|gb|EIL28302.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CVM9570]
gi|388374112|gb|EIL37314.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM9942]
gi|388379005|gb|EIL41697.1| putative oxidoreductase [Escherichia coli O26:H11 str. CVM10026]
gi|388416777|gb|EIL76653.1| dihydropyrimidine dehydrogenase [Escherichia coli CUMT8]
gi|391305260|gb|EIQ63051.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli EPECa12]
gi|394386319|gb|EJE63825.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM10224]
gi|394387018|gb|EJE64488.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CVM9602]
gi|394391777|gb|EJE68606.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CVM9634]
gi|394401384|gb|EJE77197.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM10021]
gi|394404625|gb|EJE79976.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CVM9455]
gi|394416215|gb|EJE90022.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CVM9553]
gi|394426376|gb|EJE99219.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM9952]
gi|394427280|gb|EJE99995.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CVM10030]
gi|397784712|gb|EJK95565.1| hypothetical protein ECSTECO31_2375 [Escherichia coli STEC_O31]
gi|406777007|gb|AFS56431.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. 2009EL-2050]
gi|407053595|gb|AFS73646.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. 2011C-3493]
gi|407066074|gb|AFS87121.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O104:H4
str. 2009EL-2071]
gi|408296547|gb|EKJ14773.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1865]
gi|421938139|gb|EKT95726.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O111:H8
str. CFSAN001632]
gi|421943059|gb|EKU00357.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O26:H11
str. CFSAN001629]
gi|421943537|gb|EKU00820.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli
O111:H11 str. CFSAN001630]
gi|429346144|gb|EKY82925.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429348896|gb|EKY85652.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02092]
gi|429361118|gb|EKY97775.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02030]
gi|429362549|gb|EKY99196.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02093]
gi|429362820|gb|EKY99465.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02281]
gi|429365938|gb|EKZ02550.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02318]
gi|429376793|gb|EKZ13321.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-02913]
gi|429379267|gb|EKZ15768.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-03439]
gi|429380835|gb|EKZ17324.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-03943]
gi|429393056|gb|EKZ29455.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
11-04080]
gi|429405157|gb|EKZ41423.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429406923|gb|EKZ43177.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429410671|gb|EKZ46892.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429414383|gb|EKZ50558.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429420992|gb|EKZ57114.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429429326|gb|EKZ65395.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429432013|gb|EKZ68053.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429436219|gb|EKZ72235.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429438424|gb|EKZ74417.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429448046|gb|EKZ83963.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429451764|gb|EKZ87652.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429457708|gb|EKZ93546.1| dihydroorotate dehydrogenase [Escherichia coli O104:H4 str.
Ec12-0466]
gi|430898617|gb|ELC20750.1| dihydroorotate dehydrogenase [Escherichia coli KTE12]
gi|431006892|gb|ELD21861.1| dihydroorotate dehydrogenase [Escherichia coli KTE210]
gi|431309719|gb|ELF97912.1| dihydroorotate dehydrogenase [Escherichia coli KTE48]
gi|431376148|gb|ELG61471.1| dihydroorotate dehydrogenase [Escherichia coli KTE135]
gi|431385497|gb|ELG69484.1| dihydroorotate dehydrogenase [Escherichia coli KTE136]
gi|431471374|gb|ELH51267.1| dihydroorotate dehydrogenase [Escherichia coli KTE203]
gi|431609869|gb|ELI79174.1| dihydroorotate dehydrogenase [Escherichia coli KTE138]
gi|431645952|gb|ELJ13492.1| dihydroorotate dehydrogenase [Escherichia coli KTE163]
gi|431656368|gb|ELJ23354.1| dihydroorotate dehydrogenase [Escherichia coli KTE166]
Length = 411
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L +QLK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRQLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|337267956|ref|YP_004612011.1| dihydroorotate dehydrogenase family protein [Mesorhizobium
opportunistum WSM2075]
gi|336028266|gb|AEH87917.1| dihydroorotate dehydrogenase family protein [Mesorhizobium
opportunistum WSM2075]
Length = 437
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/358 (40%), Positives = 209/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+ G++ PNPF + S PP + RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DIRNNFVGIKSPNPFWLASAPPTDKAYNVIRAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L+ L+E KQ+K +PD+ ++ S+M + +
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLQVNLREIKQVKKDWPDRAIVVSLMVPCVEES 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEET D IE+NF CPHGM ER MGAAVGQ +E V W +PV K
Sbjct: 118 WKAILPVVEETEADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVRWCKQNTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PAR AL G++ VS INTI S+ G+DL + P+P ++G + GGY AV
Sbjct: 178 LTPNITDVRKPARAALAGGTDAVSLINTINSITGVDLDSFAPQPIIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V IA+ ++ + +SGIGG+ T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIAMNMVAEIARDTET----RGLPISGIGGITTWRDAAEFMALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L+++M +S++D G + T + L + + I Q ++ G
Sbjct: 294 KIVQEMIAGLENWMDEKGHASLDDIVGRATPNVTDWQYLNLNYVAKARIDQDACIKCG 351
>gi|359786715|ref|ZP_09289808.1| dihydropyrimidine dehydrogenase subunit B [Halomonas sp. GFAJ-1]
gi|359296009|gb|EHK60265.1| dihydropyrimidine dehydrogenase subunit B [Halomonas sp. GFAJ-1]
Length = 444
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 149/347 (42%), Positives = 203/347 (58%), Gaps = 10/347 (2%)
Query: 37 ASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAK 96
+ DS DLS+ G++ PNPF + S PP + RA++ GWG VV KT+ +
Sbjct: 14 SGDSVVNGVDLSVNFAGIKAPNPFWLASAPPTDKAYNVVRAYEAGWGGVVWKTLG-EEPP 72
Query: 97 VINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI 156
+NV+ RY+ A+ ++IG+ NIELI+DR LE L+E Q+K +PD+ LI SI
Sbjct: 73 AVNVSSRYS-----AHYGKNREVIGFNNIELITDRSLEINLQEITQVKKDWPDRALIVSI 127
Query: 157 MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK 216
M N+ AW ++ VE TG D IE+N CPHGMPER MGAAVGQ+ L+E+V W
Sbjct: 128 MVPCNEEAWAYILPLVEATGADGIELNLGCPHGMPERGMGAAVGQNPDLIEKVTYWCKKH 187
Query: 217 ATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTP 276
+ PV K+TPNITDI A+ ALR G++ VS INTI S+ IDL + P V ST
Sbjct: 188 YSKPVIVKLTPNITDIRVGAQAALRGGADAVSLINTINSITSIDLDNMVAMPTVGHQSTH 247
Query: 277 GGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336
GGY AV PIA+ V IA+ + +SGIGG+ T DAAEFI LG+ +VQVC
Sbjct: 248 GGYCGSAVKPIAMNMVAEIAR----DPATATLPISGIGGISTWRDAAEFISLGSGSVQVC 303
Query: 337 TGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
T M++G+ +V+ + + L +M + SIE F ++ T L
Sbjct: 304 TAAMLNGFRIVEEMKDGLSRWMAEKGYDSIEAFSRKAVPQTTDWKHL 350
>gi|417145880|ref|ZP_11986838.1| dihydropyrimidine dehydrogenase [Escherichia coli 1.2264]
gi|386163332|gb|EIH25127.1| dihydropyrimidine dehydrogenase [Escherichia coli 1.2264]
Length = 411
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L +QLK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRQLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|293410506|ref|ZP_06654082.1| conserved hypothetical protein [Escherichia coli B354]
gi|432392661|ref|ZP_19635491.1| dihydroorotate dehydrogenase [Escherichia coli KTE21]
gi|291470974|gb|EFF13458.1| conserved hypothetical protein [Escherichia coli B354]
gi|430917817|gb|ELC38856.1| dihydroorotate dehydrogenase [Escherichia coli KTE21]
Length = 411
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S++D G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQDMVG 317
>gi|421850875|ref|ZP_16283816.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus NBRC 101655]
gi|371458289|dbj|GAB29019.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus NBRC 101655]
Length = 422
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 208/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+L + G++ PNPF + S PP ++RAF+ GWG VV KT+ D V+NV+ RY
Sbjct: 3 NLKTSFAGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEDP-PVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L NG+ ++IG NIELISDRPL + E K +K YPD+ ++ S+M + W
Sbjct: 62 SLDY--NGA---RMIGLNNIELISDRPLAVNIAEIKSVKRDYPDRAVVVSLMVPCQEDKW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ +E V W +PV K+
Sbjct: 117 KAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTRWCKQNTRMPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT+I PA A R G++GVS INTI SV+G+DL + P P V G T GGY AV
Sbjct: 177 TPNITNILMPAHAAKRGGADGVSLINTIQSVIGVDLDAMAPMPVVGGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + IA+ + +SGIGG+ T DAAEF+ +G+ T+QVCT M +G+
Sbjct: 237 PIALRMIGEIAR----DPEMAGMPISGIGGIGTWRDAAEFLAMGSTTLQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL-VRMQQEA-IQQRKAVRKGL 401
+V+ + + L +M ++ I G +I+ F L ++ + A I Q V GL
Sbjct: 293 IVEDMIDGLSAWMDQKGYADIPAVSGQAIQKFVPWNTLNLKFKTIANINQDACVSCGL 350
>gi|432719270|ref|ZP_19954239.1| dihydroorotate dehydrogenase [Escherichia coli KTE9]
gi|432793362|ref|ZP_20027446.1| dihydroorotate dehydrogenase [Escherichia coli KTE78]
gi|432799320|ref|ZP_20033342.1| dihydroorotate dehydrogenase [Escherichia coli KTE79]
gi|431263082|gb|ELF55071.1| dihydroorotate dehydrogenase [Escherichia coli KTE9]
gi|431339025|gb|ELG26087.1| dihydroorotate dehydrogenase [Escherichia coli KTE78]
gi|431343186|gb|ELG30150.1| dihydroorotate dehydrogenase [Escherichia coli KTE79]
Length = 411
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 146/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKDDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S++D G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQDMVG 317
>gi|258543222|ref|YP_003188655.1| dihydropyrimidine dehydrogenase [Acetobacter pasteurianus IFO
3283-01]
gi|384043144|ref|YP_005481888.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-12]
gi|384051661|ref|YP_005478724.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-03]
gi|384054768|ref|YP_005487862.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-07]
gi|384058003|ref|YP_005490670.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-22]
gi|384060644|ref|YP_005499772.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-26]
gi|384063936|ref|YP_005484578.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-32]
gi|384119945|ref|YP_005502569.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256634300|dbj|BAI00276.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-01]
gi|256637360|dbj|BAI03329.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-03]
gi|256640412|dbj|BAI06374.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-07]
gi|256643469|dbj|BAI09424.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-22]
gi|256646524|dbj|BAI12472.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-26]
gi|256649577|dbj|BAI15518.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-32]
gi|256652563|dbj|BAI18497.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655621|dbj|BAI21548.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus IFO 3283-12]
Length = 422
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 208/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+L + G++ PNPF + S PP ++RAF+ GWG VV KT+ D V+NV+ RY
Sbjct: 3 NLKTSFAGIKSPNPFWLASAPPTDKAYNVRRAFEAGWGGVVWKTLGEDP-PVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L NG+ ++IG NIELISDRPL + E K +K YPD+ ++ S+M + W
Sbjct: 62 SLDY--NGA---RMIGLNNIELISDRPLAVNIAEIKSVKRDYPDRAVVVSLMVPCQEDKW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ +E V W +PV K+
Sbjct: 117 KAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTRWCKQNTRMPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT+I PA A R G++GVS INTI SV+G+DL + P P V G T GGY AV
Sbjct: 177 TPNITNILMPAHAAKRGGADGVSLINTIQSVIGVDLDAMAPMPIVGGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + IA+ + +SGIGG+ T DAAEF+ +G+ T+QVCT M +G+
Sbjct: 237 PIALRMIGEIAR----DPEMAGMPISGIGGIGTWRDAAEFLAMGSTTLQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL-VRMQQEA-IQQRKAVRKGL 401
+V+ + + L +M ++ I G +I+ F L ++ + A I Q V GL
Sbjct: 293 IVEDMIDGLSAWMDQKGYADIPAVSGQAIQKFVPWNTLNLKFKTIANINQDACVSCGL 350
>gi|116626688|ref|YP_828844.1| dihydropyrimidine dehydrogenase [Candidatus Solibacter usitatus
Ellin6076]
gi|116229850|gb|ABJ88559.1| dihydropyrimidine dehydrogenase (NADP+) / dihydrouracil
dehydrogenase (NAD+) / dihydroorotate oxidase B,
catalytic subunit [Candidatus Solibacter usitatus
Ellin6076]
Length = 446
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 161/372 (43%), Positives = 212/372 (56%), Gaps = 27/372 (7%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS G++ PNPF + SGPP + RAFD GWG V KT+ ++NV+ RY+
Sbjct: 3 DLSTNFAGIRCPNPFWLASGPPTNCGEQIMRAFDAGWGGAVWKTI---GEPIVNVSSRYS 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ NG +++G NIELISDRP+ET L+E ++K YP +IAS+M E + AW
Sbjct: 60 SV--DWNGQ---RMMGLNNIELISDRPIETNLREITEVKKRYPKHAVIASLMVESTREAW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQ----DCRLLEEVCGWINAKATVPV 221
+++ R E+ G D +E+NF CPHGM ER MGAAVGQ C + E W+ A PV
Sbjct: 115 HDIVKRSEDAGADGLELNFGCPHGMSERGMGAAVGQVPDYSCMITE----WVKEVARTPV 170
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
K+TPNITDI AR A R ++ +SAINTI S+ GIDL T P P V G ++ GGY
Sbjct: 171 LVKLTPNITDIRAVARAAKRGRADALSAINTINSITGIDLDTFTPRPNVGGKTSHGGYCG 230
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGV 339
AV PIAL V IA +D L SGIGG+ +AAEFILLG TVQVCT
Sbjct: 231 PAVKPIALHLVQQIA-------SDPAVGLPISGIGGIGGWREAAEFILLGCGTVQVCTAA 283
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAV 397
M +G+ +V+ + + L ++M F +IEDFRG S+ T H +L I + K +
Sbjct: 284 MHYGFRIVEDMIDGLSNWMDEKGFRTIEDFRGLSVPRVTDWKHLDLNYKIVARINRDKCI 343
Query: 398 RKGLQSDKDWTG 409
L W G
Sbjct: 344 GCDLCYVACWDG 355
>gi|430004449|emb|CCF20244.1| Dihydropyrimidine dehydrogenase [Rhizobium sp.]
Length = 438
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 207/360 (57%), Gaps = 16/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+ G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DIRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGAEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L L+E K++K +PD+ ++ASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYVNLREMKEVKKNWPDRAIVASIMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEET +D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETEVDGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A G++ VS INTI S++ +DL + P P ++G + GGY AV
Sbjct: 178 LTPNITDIRYPARAAKAGGTDAVSLINTISSIVSVDLDSFAPVPTIDGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + + Y L SGIGGV T DAAEF+ LGA VQVCT M +
Sbjct: 238 KPIALNMVAEIAR------DPETYGLPISGIGGVTTWRDAAEFLALGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTT--HTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L D+M +++D G ++ T + L + + I Q ++ G
Sbjct: 292 GFKIVQEMITGLSDWMDAKGHRTLDDICGRAVSNVTDWRYLNLNYVAKAHIDQELCIKCG 351
>gi|444947993|ref|ZP_21266315.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0839]
gi|444557573|gb|ELV34899.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0839]
Length = 411
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASRLSHYLADQGFDSLQEMVG 317
>gi|421852631|ref|ZP_16285317.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371479135|dbj|GAB30520.1| dihydroorotate dehydrogenase [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 422
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 208/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+L + G++ PNPF + S PP ++RAF+ GWG VV KT+ D V+NV+ RY
Sbjct: 3 NLKTSFAGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEDP-PVVNVSSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L NG+ ++IG NIELISDRPL + E K +K YPD+ ++ S+M + W
Sbjct: 62 SLDY--NGA---RMIGLNNIELISDRPLAVNIAEIKSVKRDYPDRAVVVSLMVPCQEDKW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ +E V W +PV K+
Sbjct: 117 KAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTRWCKQNTRMPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT+I PA A R G++GVS INTI SV+G+DL + P P V G T GGY AV
Sbjct: 177 TPNITNILMPAHAAKRGGADGVSLINTIQSVIGVDLDAMAPMPIVGGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + IA+ + +SGIGG+ T DAAEF+ +G+ T+QVCT M +G+
Sbjct: 237 PIALRMIGEIAR----DPEMAGMPISGIGGIGTWRDAAEFLAMGSTTLQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL-VRMQQEA-IQQRKAVRKGL 401
+V+ + + L +M ++ I G +I+ F L ++ + A I Q V GL
Sbjct: 293 IVEDMIDGLSAWMDQKGYADIPAVSGQAIQKFVPWNTLNLKFKTIANINQDACVSCGL 350
>gi|432851438|ref|ZP_20081823.1| dihydroorotate dehydrogenase [Escherichia coli KTE144]
gi|431399776|gb|ELG83166.1| dihydroorotate dehydrogenase [Escherichia coli KTE144]
Length = 411
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 146/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEDNLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELHDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S++D G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQDMVG 317
>gi|417138864|ref|ZP_11982391.1| dihydropyrimidine dehydrogenase [Escherichia coli 97.0259]
gi|417308608|ref|ZP_12095452.1| hypothetical protein PPECC33_20240 [Escherichia coli PCN033]
gi|422972128|ref|ZP_16975180.1| dihydroorotate dehydrogenase [Escherichia coli TA124]
gi|338769795|gb|EGP24571.1| hypothetical protein PPECC33_20240 [Escherichia coli PCN033]
gi|371598009|gb|EHN86824.1| dihydroorotate dehydrogenase [Escherichia coli TA124]
gi|386157509|gb|EIH13849.1| dihydropyrimidine dehydrogenase [Escherichia coli 97.0259]
Length = 411
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 146/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M + +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMHTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S++D G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQDMVG 317
>gi|299538616|ref|ZP_07051899.1| dihydropyrimidine dehydrogenase [Lysinibacillus fusiformis ZC1]
gi|424739480|ref|ZP_18167898.1| dihydropyrimidine dehydrogenase [Lysinibacillus fusiformis ZB2]
gi|298726203|gb|EFI66795.1| dihydropyrimidine dehydrogenase [Lysinibacillus fusiformis ZC1]
gi|422946673|gb|EKU41080.1| dihydropyrimidine dehydrogenase [Lysinibacillus fusiformis ZB2]
Length = 420
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 201/339 (59%), Gaps = 15/339 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL I + G++ PNPF + S PP + ++RAF+ GWG V KT+ ++NV+ R+A
Sbjct: 3 DLRINLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GEPILNVSSRFA 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ + G+ NIELI+DRPLE L+E + K +P+ +IAS+M E +
Sbjct: 60 AV------SYNGQRVAGFNNIELITDRPLEVNLQEIYETKKKFPNHAIIASLMVEPKQEK 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ RVE+ G+D +E+NF CPHGM ER MG+A GQ L+E+ W+ A PV K
Sbjct: 114 WHEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVEKQTYWVKEAARTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT A A R G++ VS INTI S+ G+DL + P V G GGY AV
Sbjct: 174 LTPNITDITVTAEAATRGGADAVSMINTINSLAGVDLDSWNTVPHVAGKGAHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V A+ + +SGIGG+ DAAEFIL+GA VQVCT M HG+
Sbjct: 234 KPIALNMVAECARNPLV-----NVPISGIGGISNWQDAAEFILMGATGVQVCTAAMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + + L +++ +S+ + G S++ ++ +L
Sbjct: 289 SIVEDMIDGLNNYLDDKGLASVMELVGRSVQRYSNWGDL 327
>gi|317128027|ref|YP_004094309.1| dihydroorotate dehydrogenase [Bacillus cellulosilyticus DSM 2522]
gi|315472975|gb|ADU29578.1| dihydroorotate dehydrogenase family protein [Bacillus
cellulosilyticus DSM 2522]
Length = 422
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 139/333 (41%), Positives = 197/333 (59%), Gaps = 13/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL I + G++ PNPF + S PP + ++RAF+ GWG V KT+ +IN T R+A
Sbjct: 3 DLQINLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GDPIINTTSRFA 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ NG ++ G+ NIELI+DRPLE LKE + K +PD ++AS+M E + W
Sbjct: 60 AVNF--NGQ---RVAGFNNIELITDRPLEVNLKEIYETKKRFPDHAIVASLMVEPQQEKW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ RVE+ G+D +E+NF CPHGM ER MG+A GQ L+E+ W+ AT PV K+
Sbjct: 115 HEIVKRVEDVGVDGLELNFGCPHGMAERGMGSASGQVPELVEKQTYWVKEVATTPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDIT A A+R G++ VS INTI S+ G+D+ T P V G GGY AV
Sbjct: 175 TPNITDITVTAEAAVRGGADAVSMINTINSLAGVDIDTWNTIPNVAGKGAHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V A+ + +SGIGG+ D E++L+GA VQVCT M HG+
Sbjct: 235 PIALNMVAECARNPLV-----NVPISGIGGISNWKDTVEYLLMGATGVQVCTAAMHHGFR 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + E L +++ S++ D G S+ ++
Sbjct: 290 IVEDMIEGLSNYLDEKGISAVMDLVGKSVPKYS 322
>gi|386705409|ref|YP_006169256.1| hypothetical protein P12B_c2241 [Escherichia coli P12b]
gi|383103577|gb|AFG41086.1| hypothetical protein P12B_c2241 [Escherichia coli P12b]
Length = 411
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 199/326 (61%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ+ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQNPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|301024363|ref|ZP_07188052.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 196-1]
gi|432564400|ref|ZP_19800983.1| dihydroorotate dehydrogenase [Escherichia coli KTE51]
gi|299880460|gb|EFI88671.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 196-1]
gi|431093328|gb|ELD98994.1| dihydroorotate dehydrogenase [Escherichia coli KTE51]
Length = 411
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 199/326 (61%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG+VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGSVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|398939285|ref|ZP_10668459.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp.
GM41(2012)]
gi|398164410|gb|EJM52548.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp.
GM41(2012)]
Length = 424
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 216/352 (61%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G+ NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVVGFNNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCIEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
++++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KQILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ ++L+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVANPAVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ +SGIGG+ + DAAEFI LG+ +VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPISGIGGISSWRDAAEFIALGSGSVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M ++S+ +F G ++ +Y + +++ ++ QEA
Sbjct: 293 IVEEMKDGLSRWMDSQGYASVSEFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|297566516|ref|YP_003685488.1| dihydroorotate dehydrogenase family protein [Meiothermus silvanus
DSM 9946]
gi|296850965|gb|ADH63980.1| dihydroorotate dehydrogenase family protein [Meiothermus silvanus
DSM 9946]
Length = 461
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 138/329 (41%), Positives = 203/329 (61%), Gaps = 10/329 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL I G++ PNPF + S PP + + +AF+ GWG V KT+ A V+NV+ RY
Sbjct: 3 DLRINFAGIRSPNPFWLASAPPTNSGAQIHKAFEAGWGGAVWKTI---GAPVLNVSNRYG 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
G+ +++ N+ELISDRPLE L+E + +K +PD+ +I S M E AW
Sbjct: 60 AWHYGSQ-----KMLAINNVELISDRPLEVNLREIRDVKRHWPDRAVIVSAMVESTPEAW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+++ ++E+TG D IE+N+ CPHGM ER MG+AVGQ E++ W+ + A +PV K+
Sbjct: 115 RDIVLKIEDTGADGIELNYGCPHGMSERGMGSAVGQVPEYCEQITRWVTSVAKIPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT+I+ PA+ A+ G++ +S INTI S++G++L TL P + G GGY+ AV
Sbjct: 175 TPNITNISYPAKAAVAGGAQAISLINTINSIIGVNLDTLELVPNIGGKGGHGGYAGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +A E + +SG+GG+ T DAAEF+LLGA ++QVCT VM +GY
Sbjct: 235 PIALHLLSQVAT--TPEVSGSGIPISGMGGISTWRDAAEFLLLGATSLQVCTAVMHYGYR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+++ LC+ L +M F SI D G S+
Sbjct: 293 IIEDLCDGLSHWMDSQGFKSISDVVGKSL 321
>gi|187733441|ref|YP_001879524.1| dihydropyrimidine dehydrogenase [Shigella boydii CDC 3083-94]
gi|187430433|gb|ACD09707.1| dihydroorotate dehydrogenase family protein [Shigella boydii CDC
3083-94]
Length = 411
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFTAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|384920879|ref|ZP_10020876.1| dihydropyrimidine dehydrogenase [Citreicella sp. 357]
gi|384465218|gb|EIE49766.1| dihydropyrimidine dehydrogenase [Citreicella sp. 357]
Length = 434
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 204/360 (56%), Gaps = 17/360 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ D V+NV PRY
Sbjct: 3 DLTSNFIGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGEDGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++ NIELI+DRPLE L+E K +K YPD+ ++ S+M + A
Sbjct: 63 -----GAVWGADRRLLALNNIELITDRPLEVNLREIKSVKRDYPDRAVVVSLMVPCTEDA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ +VE+TG D +E+NF CPHGM ER MGAAVGQ +E V W+ + +P K
Sbjct: 118 WKAILPQVEDTGADGVELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWVKQHSRMPCIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A G++ VS INTI S+ +DL PEP ++G GG AV
Sbjct: 178 LTPNITDIRAPARAAHAGGADAVSLINTINSITSVDLDLFAPEPTIDGKGAHGGLCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
PIAL V IA+ + Y L SGIGGV T DAAEF+ LGA VQVCT M +
Sbjct: 238 KPIALNMVSEIAR------SPDMYGLPVSGIGGVTTWKDAAEFMALGAGNVQVCTAAMTY 291
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
G+ +V+ + L ++ +++D G ++ + H L + + I Q + G
Sbjct: 292 GFKVVQEMISGLAQYLDEKGL-ALDDLVGRAVPNVSDWQHLNLNYITKAVIDQDACISCG 350
>gi|425300985|ref|ZP_18690883.1| hypothetical protein EC07798_2805 [Escherichia coli 07798]
gi|408213371|gb|EKI37856.1| hypothetical protein EC07798_2805 [Escherichia coli 07798]
Length = 411
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|81764578|sp|Q8X643.1|PREA_ECO57 RecName: Full=NAD-dependent dihydropyrimidine dehydrogenase subunit
PreA; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|12516464|gb|AAG57285.1|AE005446_13 putative oxidoreductase [Escherichia coli O157:H7 str. EDL933]
gi|13362508|dbj|BAB36462.1| putative oxidoreductase [Escherichia coli O157:H7 str. Sakai]
gi|73856146|gb|AAZ88853.1| putative oxidoreductase [Shigella sonnei Ss046]
gi|209766278|gb|ACI81451.1| putative oxidoreductase [Escherichia coli]
gi|209766280|gb|ACI81452.1| putative oxidoreductase [Escherichia coli]
gi|209766282|gb|ACI81453.1| putative oxidoreductase [Escherichia coli]
gi|209766286|gb|ACI81455.1| putative oxidoreductase [Escherichia coli]
Length = 413
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 7 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 64
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 65 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 118
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 119 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 177
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 178 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 237
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 238 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 293
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 294 IVEDMASGLSHYLADQGFDSLQEMVG 319
>gi|432862742|ref|ZP_20087031.1| dihydroorotate dehydrogenase [Escherichia coli KTE146]
gi|431404781|gb|ELG88027.1| dihydroorotate dehydrogenase [Escherichia coli KTE146]
Length = 411
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCQAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|209766284|gb|ACI81454.1| putative oxidoreductase [Escherichia coli]
Length = 413
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 7 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 64
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 65 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 118
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 119 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRTVKRGSTLPMLAKM 177
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 178 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 237
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 238 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 293
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 294 IVEDMASGLSHYLADQGFDSLQEMVG 319
>gi|338980149|ref|ZP_08631455.1| Dihydropyrimidine dehydrogenase [Acidiphilium sp. PM]
gi|338208925|gb|EGO96738.1| Dihydropyrimidine dehydrogenase [Acidiphilium sp. PM]
Length = 428
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 203/338 (60%), Gaps = 10/338 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL + G++ PNPF + S PP ++RA GWG +V KTV D ++N + RY
Sbjct: 3 DLRVNFAGIKAPNPFWLASAPPTDKEYNVERALRAGWGGIVWKTVGEDP-PIVNASSRYG 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L NG +++G NIELI+DRPLE L+E K +K +PD+ ++ SIM +A+W
Sbjct: 62 GL--AYNGQ---RLMGLNNIELITDRPLEVNLQEIKAVKKRWPDRAIVVSIMVPCEEASW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ +E V W +PV K+
Sbjct: 117 KAILPLVEETGADGIELNFGCPHGMSERGMGAAVGQVPDYVEMVTRWCRQFCRMPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI +PAR A G+ VS INT+ S++ +DL + P P V+G T GGY AV
Sbjct: 177 TPNITDILKPARAARAGGAHAVSLINTVQSIVSVDLDLMAPTPTVKGVGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ + +SGIGG+ + DAAEFI LGA TVQ+CT M +G+
Sbjct: 237 PIALRMVGEIAR----DRETAGLPISGIGGISSWHDAAEFIALGAGTVQICTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + + L ++M +++I DF+G ++ F +L
Sbjct: 293 IVEDMVDGLANWMDEKGYATIADFQGRAVPNFVHWQDL 330
>gi|218705675|ref|YP_002413194.1| dihydropyrimidine dehydrogenase [Escherichia coli UMN026]
gi|293405615|ref|ZP_06649607.1| yeiA protein [Escherichia coli FVEC1412]
gi|298381296|ref|ZP_06990895.1| yeiA protein [Escherichia coli FVEC1302]
gi|300897797|ref|ZP_07116190.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 198-1]
gi|331663649|ref|ZP_08364559.1| putative oxidoreductase [Escherichia coli TA143]
gi|417587141|ref|ZP_12237912.1| hypothetical protein ECSTECC16502_2778 [Escherichia coli
STEC_C165-02]
gi|419932787|ref|ZP_14450072.1| dihydropyrimidine dehydrogenase [Escherichia coli 576-1]
gi|432354087|ref|ZP_19597360.1| dihydroorotate dehydrogenase [Escherichia coli KTE2]
gi|432402439|ref|ZP_19645191.1| dihydroorotate dehydrogenase [Escherichia coli KTE26]
gi|432426703|ref|ZP_19669204.1| dihydroorotate dehydrogenase [Escherichia coli KTE181]
gi|432461169|ref|ZP_19703318.1| dihydroorotate dehydrogenase [Escherichia coli KTE204]
gi|432476376|ref|ZP_19718375.1| dihydroorotate dehydrogenase [Escherichia coli KTE208]
gi|432489824|ref|ZP_19731698.1| dihydroorotate dehydrogenase [Escherichia coli KTE213]
gi|432518218|ref|ZP_19755406.1| dihydroorotate dehydrogenase [Escherichia coli KTE228]
gi|432538339|ref|ZP_19775241.1| dihydroorotate dehydrogenase [Escherichia coli KTE235]
gi|432631934|ref|ZP_19867860.1| dihydroorotate dehydrogenase [Escherichia coli KTE80]
gi|432641648|ref|ZP_19877482.1| dihydroorotate dehydrogenase [Escherichia coli KTE83]
gi|432666543|ref|ZP_19902124.1| dihydroorotate dehydrogenase [Escherichia coli KTE116]
gi|432775232|ref|ZP_20009511.1| dihydroorotate dehydrogenase [Escherichia coli KTE54]
gi|432839832|ref|ZP_20073318.1| dihydroorotate dehydrogenase [Escherichia coli KTE140]
gi|432887129|ref|ZP_20101203.1| dihydroorotate dehydrogenase [Escherichia coli KTE158]
gi|432913327|ref|ZP_20119024.1| dihydroorotate dehydrogenase [Escherichia coli KTE190]
gi|433019216|ref|ZP_20207437.1| dihydroorotate dehydrogenase [Escherichia coli KTE105]
gi|433053756|ref|ZP_20240936.1| dihydroorotate dehydrogenase [Escherichia coli KTE122]
gi|433068461|ref|ZP_20255251.1| dihydroorotate dehydrogenase [Escherichia coli KTE128]
gi|433159190|ref|ZP_20344028.1| dihydroorotate dehydrogenase [Escherichia coli KTE177]
gi|433179003|ref|ZP_20363403.1| dihydroorotate dehydrogenase [Escherichia coli KTE82]
gi|433203765|ref|ZP_20387541.1| dihydroorotate dehydrogenase [Escherichia coli KTE95]
gi|218432772|emb|CAR13666.1| putative oxidoreductase subunit [Escherichia coli UMN026]
gi|291427823|gb|EFF00850.1| yeiA protein [Escherichia coli FVEC1412]
gi|298278738|gb|EFI20252.1| yeiA protein [Escherichia coli FVEC1302]
gi|300358512|gb|EFJ74382.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 198-1]
gi|331059448|gb|EGI31425.1| putative oxidoreductase [Escherichia coli TA143]
gi|345336769|gb|EGW69203.1| hypothetical protein ECSTECC16502_2778 [Escherichia coli
STEC_C165-02]
gi|388415730|gb|EIL75650.1| dihydropyrimidine dehydrogenase [Escherichia coli 576-1]
gi|430875260|gb|ELB98802.1| dihydroorotate dehydrogenase [Escherichia coli KTE2]
gi|430924910|gb|ELC45583.1| dihydroorotate dehydrogenase [Escherichia coli KTE26]
gi|430955635|gb|ELC74417.1| dihydroorotate dehydrogenase [Escherichia coli KTE181]
gi|430988859|gb|ELD05328.1| dihydroorotate dehydrogenase [Escherichia coli KTE204]
gi|431005544|gb|ELD20565.1| dihydroorotate dehydrogenase [Escherichia coli KTE208]
gi|431020441|gb|ELD33786.1| dihydroorotate dehydrogenase [Escherichia coli KTE213]
gi|431050840|gb|ELD60516.1| dihydroorotate dehydrogenase [Escherichia coli KTE228]
gi|431069228|gb|ELD77557.1| dihydroorotate dehydrogenase [Escherichia coli KTE235]
gi|431170134|gb|ELE70328.1| dihydroorotate dehydrogenase [Escherichia coli KTE80]
gi|431181531|gb|ELE81393.1| dihydroorotate dehydrogenase [Escherichia coli KTE83]
gi|431200837|gb|ELE99555.1| dihydroorotate dehydrogenase [Escherichia coli KTE116]
gi|431318271|gb|ELG06037.1| dihydroorotate dehydrogenase [Escherichia coli KTE54]
gi|431389005|gb|ELG72720.1| dihydroorotate dehydrogenase [Escherichia coli KTE140]
gi|431416127|gb|ELG98614.1| dihydroorotate dehydrogenase [Escherichia coli KTE158]
gi|431439627|gb|ELH20960.1| dihydroorotate dehydrogenase [Escherichia coli KTE190]
gi|431531117|gb|ELI07786.1| dihydroorotate dehydrogenase [Escherichia coli KTE105]
gi|431570156|gb|ELI43082.1| dihydroorotate dehydrogenase [Escherichia coli KTE122]
gi|431584088|gb|ELI56075.1| dihydroorotate dehydrogenase [Escherichia coli KTE128]
gi|431677829|gb|ELJ43842.1| dihydroorotate dehydrogenase [Escherichia coli KTE177]
gi|431701368|gb|ELJ66287.1| dihydroorotate dehydrogenase [Escherichia coli KTE82]
gi|431721314|gb|ELJ85309.1| dihydroorotate dehydrogenase [Escherichia coli KTE95]
Length = 411
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|91211433|ref|YP_541419.1| dihydropyrimidine dehydrogenase [Escherichia coli UTI89]
gi|237704612|ref|ZP_04535093.1| dihydropyrimidine dehydrogenase [Escherichia sp. 3_2_53FAA]
gi|26108933|gb|AAN81136.1|AE016763_95 Hypothetical protein yeiA [Escherichia coli CFT073]
gi|91073007|gb|ABE07888.1| hypothetical protein YeiA [Escherichia coli UTI89]
gi|226900978|gb|EEH87237.1| dihydropyrimidine dehydrogenase [Escherichia sp. 3_2_53FAA]
Length = 413
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 7 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 64
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 65 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 118
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 119 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 177
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 178 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 237
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 238 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 293
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 294 IVEDMASGLSHYLADQGFDSLQEMVG 319
>gi|157158894|ref|YP_001463498.1| dihydropyrimidine dehydrogenase [Escherichia coli E24377A]
gi|191165356|ref|ZP_03027198.1| dihydroorotate dehydrogenase family protein [Escherichia coli B7A]
gi|218554712|ref|YP_002387625.1| dihydropyrimidine dehydrogenase [Escherichia coli IAI1]
gi|300819162|ref|ZP_07099364.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 107-1]
gi|300926249|ref|ZP_07142052.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 182-1]
gi|301328626|ref|ZP_07221687.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 78-1]
gi|331653576|ref|ZP_08354577.1| putative oxidoreductase [Escherichia coli M718]
gi|415876000|ref|ZP_11542573.1| dihydroorotate dehydrogenase family protein [Escherichia coli MS
79-10]
gi|416343710|ref|ZP_11677610.1| dihydropyrimidine dehydrogenase [Escherichia coli EC4100B]
gi|417133206|ref|ZP_11977991.1| dihydropyrimidine dehydrogenase [Escherichia coli 5.0588]
gi|419345812|ref|ZP_13887187.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC13A]
gi|419350225|ref|ZP_13891563.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC13B]
gi|419360730|ref|ZP_13901948.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC13D]
gi|419365719|ref|ZP_13906881.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC13E]
gi|419370651|ref|ZP_13911770.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC14A]
gi|419930851|ref|ZP_14448443.1| dihydropyrimidine dehydrogenase [Escherichia coli 541-1]
gi|422956479|ref|ZP_16968953.1| dihydroorotate dehydrogenase [Escherichia coli H494]
gi|432750633|ref|ZP_19985237.1| dihydroorotate dehydrogenase [Escherichia coli KTE29]
gi|432806308|ref|ZP_20040236.1| dihydroorotate dehydrogenase [Escherichia coli KTE91]
gi|432934942|ref|ZP_20134379.1| dihydroorotate dehydrogenase [Escherichia coli KTE184]
gi|433194229|ref|ZP_20378219.1| dihydroorotate dehydrogenase [Escherichia coli KTE90]
gi|450218496|ref|ZP_21895870.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O08]
gi|157080924|gb|ABV20632.1| dihydroorotate dehydrogenase family protein [Escherichia coli
E24377A]
gi|190904519|gb|EDV64226.1| dihydroorotate dehydrogenase family protein [Escherichia coli B7A]
gi|218361480|emb|CAQ99069.1| putative oxidoreductase subunit [Escherichia coli IAI1]
gi|300417678|gb|EFK00989.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 182-1]
gi|300528315|gb|EFK49377.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 107-1]
gi|300845018|gb|EFK72778.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 78-1]
gi|320199742|gb|EFW74331.1| dihydropyrimidine dehydrogenase [Escherichia coli EC4100B]
gi|331048425|gb|EGI20501.1| putative oxidoreductase [Escherichia coli M718]
gi|342928931|gb|EGU97653.1| dihydroorotate dehydrogenase family protein [Escherichia coli MS
79-10]
gi|371600014|gb|EHN88792.1| dihydroorotate dehydrogenase [Escherichia coli H494]
gi|378186925|gb|EHX47546.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC13A]
gi|378200403|gb|EHX60858.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC13B]
gi|378203171|gb|EHX63595.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC13D]
gi|378212954|gb|EHX73273.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC13E]
gi|378217245|gb|EHX77524.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC14A]
gi|386151060|gb|EIH02349.1| dihydropyrimidine dehydrogenase [Escherichia coli 5.0588]
gi|388399370|gb|EIL60170.1| dihydropyrimidine dehydrogenase [Escherichia coli 541-1]
gi|431296615|gb|ELF86326.1| dihydroorotate dehydrogenase [Escherichia coli KTE29]
gi|431354450|gb|ELG41176.1| dihydroorotate dehydrogenase [Escherichia coli KTE91]
gi|431453110|gb|ELH33520.1| dihydroorotate dehydrogenase [Escherichia coli KTE184]
gi|431715679|gb|ELJ79824.1| dihydroorotate dehydrogenase [Escherichia coli KTE90]
gi|449317556|gb|EMD07641.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O08]
Length = 411
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L +QLK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRQLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELCDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|194431438|ref|ZP_03063730.1| dihydroorotate dehydrogenase family protein [Shigella dysenteriae
1012]
gi|417672548|ref|ZP_12322014.1| hypothetical protein SD15574_2140 [Shigella dysenteriae 155-74]
gi|420346082|ref|ZP_14847507.1| dihydroorotate dehydrogenase family domain protein [Shigella boydii
965-58]
gi|194420263|gb|EDX36340.1| dihydroorotate dehydrogenase family protein [Shigella dysenteriae
1012]
gi|332092632|gb|EGI97703.1| hypothetical protein SD15574_2140 [Shigella dysenteriae 155-74]
gi|391274802|gb|EIQ33602.1| dihydroorotate dehydrogenase family domain protein [Shigella boydii
965-58]
Length = 411
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|432809801|ref|ZP_20043694.1| dihydroorotate dehydrogenase [Escherichia coli KTE101]
gi|431362569|gb|ELG49147.1| dihydroorotate dehydrogenase [Escherichia coli KTE101]
Length = 411
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L +QLK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRQLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELCDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEIVG 317
>gi|339022255|ref|ZP_08646213.1| dihydroorotate dehydrogenase [Acetobacter tropicalis NBRC 101654]
gi|338750746|dbj|GAA09517.1| dihydroorotate dehydrogenase [Acetobacter tropicalis NBRC 101654]
Length = 435
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 207/358 (57%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL + G+ PNPF + S PP ++RAF+ GWG V+ KT+ D V+NV+ RY
Sbjct: 14 DLRTSFAGITSPNPFWLASAPPTDKAYNVRRAFEAGWGGVIWKTLGEDP-PVVNVSSRYG 72
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L NGS +++G NIELISDRPL + E KQ+K YPD+ ++ S+M + +W
Sbjct: 73 SLNY--NGS---RMMGLNNIELISDRPLAVNIAEIKQVKKEYPDRAVVVSLMVPCVEDSW 127
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VEETG D +E+NF CPHGM ER MGAAVGQ +E V W +PV K+
Sbjct: 128 KAILPIVEETGADGVELNFGCPHGMSERNMGAAVGQVPEYVEMVTRWCKQYTRMPVIVKL 187
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT+I PA A R G++ VS INTI SV+G+DL + P P V G T GGY AV
Sbjct: 188 TPNITNILMPAHAAKRGGADAVSLINTIQSVIGVDLDQMAPMPVVGGKGTHGGYCGPAVK 247
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + IA+ + +SGIGG+ + DAAEF+ +G+ T+QVCT M +G+
Sbjct: 248 PIALRMIGEIAR----DPEMAGMPISGIGGIGSWRDAAEFLAMGSTTLQVCTAAMHYGFR 303
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL-VRMQQEA-IQQRKAVRKGL 401
+V + + L +M ++ I G +I F +L ++ + A I Q V GL
Sbjct: 304 IVDDMIDGLSAWMDQKGYADIPSLSGQAIPKFVNWNKLNLKFKTIAEINQDACVSCGL 361
>gi|417122195|ref|ZP_11971453.1| dihydropyrimidine dehydrogenase [Escherichia coli 97.0246]
gi|386147475|gb|EIG93915.1| dihydropyrimidine dehydrogenase [Escherichia coli 97.0246]
Length = 411
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLATLRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|170019536|ref|YP_001724490.1| dihydropyrimidine dehydrogenase [Escherichia coli ATCC 8739]
gi|169754464|gb|ACA77163.1| dihydroorotate dehydrogenase family protein [Escherichia coli ATCC
8739]
Length = 411
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEVGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|90111398|ref|NP_416652.4| Dihydropyrimidine dehydrogenase, NADH-dependent, subunit B
[Escherichia coli str. K-12 substr. MG1655]
gi|157161627|ref|YP_001458945.1| dihydropyrimidine dehydrogenase [Escherichia coli HS]
gi|161367574|ref|NP_288730.2| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
EDL933]
gi|161986503|ref|YP_311088.2| dihydropyrimidine dehydrogenase [Shigella sonnei Ss046]
gi|162139776|ref|NP_311066.2| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
Sakai]
gi|168750527|ref|ZP_02775549.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4113]
gi|168757729|ref|ZP_02782736.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4401]
gi|168763803|ref|ZP_02788810.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4501]
gi|168767760|ref|ZP_02792767.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4486]
gi|168773142|ref|ZP_02798149.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4196]
gi|168779990|ref|ZP_02804997.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4076]
gi|168788957|ref|ZP_02813964.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC869]
gi|168801164|ref|ZP_02826171.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC508]
gi|170081770|ref|YP_001731090.1| dihydropyrimidine dehydrogenase [Escherichia coli str. K-12 substr.
DH10B]
gi|188496096|ref|ZP_03003366.1| dihydroorotate dehydrogenase family protein [Escherichia coli
53638]
gi|193062277|ref|ZP_03043372.1| dihydroorotate dehydrogenase family protein [Escherichia coli E22]
gi|193071085|ref|ZP_03052011.1| dihydroorotate dehydrogenase family protein [Escherichia coli
E110019]
gi|194427185|ref|ZP_03059736.1| dihydroorotate dehydrogenase family protein [Escherichia coli B171]
gi|194436016|ref|ZP_03068118.1| dihydroorotate dehydrogenase family protein [Escherichia coli
101-1]
gi|195935523|ref|ZP_03080905.1| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
EC4024]
gi|208807187|ref|ZP_03249524.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4206]
gi|208814189|ref|ZP_03255518.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4045]
gi|208819511|ref|ZP_03259831.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4042]
gi|209396337|ref|YP_002271556.1| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
EC4115]
gi|217327385|ref|ZP_03443468.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. TW14588]
gi|238901329|ref|YP_002927125.1| dihydropyrimidine dehydrogenase [Escherichia coli BW2952]
gi|251785516|ref|YP_002999820.1| NADH-dependent dihydropyrimidine dehydrogenase subunit, subunit of
NAD-dependent dihydropyrimidine dehydrogenase
[Escherichia coli BL21(DE3)]
gi|253772926|ref|YP_003035757.1| dihydropyrimidine dehydrogenase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162161|ref|YP_003045269.1| dihydropyrimidine dehydrogenase [Escherichia coli B str. REL606]
gi|254288923|ref|YP_003054671.1| dihydropyrimidine dehydrogenase [Escherichia coli BL21(DE3)]
gi|254794046|ref|YP_003078883.1| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
TW14359]
gi|260844753|ref|YP_003222531.1| oxidoreductase [Escherichia coli O103:H2 str. 12009]
gi|261223394|ref|ZP_05937675.1| predicted oxidoreductase [Escherichia coli O157:H7 str. FRIK2000]
gi|261259056|ref|ZP_05951589.1| putative oxidoreductase [Escherichia coli O157:H7 str. FRIK966]
gi|291283401|ref|YP_003500219.1| oxidoreductase [Escherichia coli O55:H7 str. CB9615]
gi|297517340|ref|ZP_06935726.1| dihydropyrimidine dehydrogenase [Escherichia coli OP50]
gi|300930376|ref|ZP_07145785.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 187-1]
gi|300950094|ref|ZP_07164041.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 116-1]
gi|300955831|ref|ZP_07168172.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 175-1]
gi|301644164|ref|ZP_07244172.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 146-1]
gi|312973604|ref|ZP_07787776.1| uncharacterized protein yeiA [Escherichia coli 1827-70]
gi|331642772|ref|ZP_08343907.1| putative oxidoreductase [Escherichia coli H736]
gi|331683824|ref|ZP_08384420.1| putative oxidoreductase [Escherichia coli H299]
gi|383179107|ref|YP_005457112.1| dihydropyrimidine dehydrogenase subunit B [Shigella sonnei 53G]
gi|386281218|ref|ZP_10058880.1| dihydroorotate dehydrogenase [Escherichia sp. 4_1_40B]
gi|386595070|ref|YP_006091470.1| dihydroorotate dehydrogenase family protein [Escherichia coli DH1]
gi|386614756|ref|YP_006134422.1| hypothetical protein UMNK88_2691 [Escherichia coli UMNK88]
gi|387507537|ref|YP_006159793.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O55:H7
str. RM12579]
gi|387621857|ref|YP_006129484.1| putative oxidoreductase [Escherichia coli DH1]
gi|387883370|ref|YP_006313672.1| dihydropyrimidine dehydrogenase [Escherichia coli Xuzhou21]
gi|388478196|ref|YP_490386.1| oxidoreductase [Escherichia coli str. K-12 substr. W3110]
gi|404375498|ref|ZP_10980682.1| dihydroorotate dehydrogenase [Escherichia sp. 1_1_43]
gi|414576742|ref|ZP_11433924.1| dihydroorotate dehydrogenase family domain protein [Shigella sonnei
3233-85]
gi|415798023|ref|ZP_11498334.1| hypothetical protein ECE128010_2020 [Escherichia coli E128010]
gi|415844601|ref|ZP_11524343.1| hypothetical protein SS53G_1042 [Shigella sonnei 53G]
gi|416310819|ref|ZP_11656554.1| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
1044]
gi|416318283|ref|ZP_11660993.1| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
EC1212]
gi|416330488|ref|ZP_11669438.1| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
1125]
gi|416775383|ref|ZP_11874273.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O157:H7
str. G5101]
gi|416787066|ref|ZP_11879183.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O157:H-
str. 493-89]
gi|416798682|ref|ZP_11884100.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O157:H-
str. H 2687]
gi|416809097|ref|ZP_11888784.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O55:H7
str. 3256-97]
gi|416819564|ref|ZP_11893342.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O55:H7
str. USDA 5905]
gi|416830490|ref|ZP_11898630.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O157:H7
str. LSU-61]
gi|417174084|ref|ZP_12003880.1| dihydropyrimidine dehydrogenase [Escherichia coli 3.2608]
gi|417182465|ref|ZP_12009022.1| dihydropyrimidine dehydrogenase [Escherichia coli 93.0624]
gi|417231502|ref|ZP_12032900.1| dihydropyrimidine dehydrogenase [Escherichia coli 5.0959]
gi|417253637|ref|ZP_12045393.1| dihydropyrimidine dehydrogenase [Escherichia coli 4.0967]
gi|417259769|ref|ZP_12047292.1| dihydropyrimidine dehydrogenase [Escherichia coli 2.3916]
gi|417272944|ref|ZP_12060293.1| dihydropyrimidine dehydrogenase [Escherichia coli 2.4168]
gi|417276622|ref|ZP_12063949.1| dihydropyrimidine dehydrogenase [Escherichia coli 3.2303]
gi|417292307|ref|ZP_12079588.1| dihydropyrimidine dehydrogenase [Escherichia coli B41]
gi|417613609|ref|ZP_12264067.1| hypothetical protein ECSTECEH250_2667 [Escherichia coli STEC_EH250]
gi|417618740|ref|ZP_12269154.1| hypothetical protein ECG581_2546 [Escherichia coli G58-1]
gi|417624039|ref|ZP_12274338.1| hypothetical protein ECSTECH18_2793 [Escherichia coli STEC_H.1.8]
gi|417635073|ref|ZP_12285286.1| hypothetical protein ECSTECS1191_2993 [Escherichia coli STEC_S1191]
gi|417944618|ref|ZP_12587859.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli XH140A]
gi|417976939|ref|ZP_12617728.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli XH001]
gi|418266502|ref|ZP_12886008.1| dihydroorotase dehydrogenase family protein [Shigella sonnei str.
Moseley]
gi|418303515|ref|ZP_12915309.1| uncharacterized protein yeiA [Escherichia coli UMNF18]
gi|418957493|ref|ZP_13509417.1| putative protein yeiA [Escherichia coli J53]
gi|419046588|ref|ZP_13593525.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3A]
gi|419051860|ref|ZP_13598732.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3B]
gi|419057888|ref|ZP_13604694.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3C]
gi|419063357|ref|ZP_13610085.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3D]
gi|419070252|ref|ZP_13615876.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3E]
gi|419076192|ref|ZP_13621711.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3F]
gi|419081351|ref|ZP_13626799.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4A]
gi|419087121|ref|ZP_13632479.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4B]
gi|419093096|ref|ZP_13638382.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4C]
gi|419098836|ref|ZP_13644036.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4D]
gi|419104709|ref|ZP_13649838.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4E]
gi|419110165|ref|ZP_13655224.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4F]
gi|419115466|ref|ZP_13660485.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC5A]
gi|419121109|ref|ZP_13666067.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC5B]
gi|419126604|ref|ZP_13671490.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC5C]
gi|419132161|ref|ZP_13676999.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC5D]
gi|419137194|ref|ZP_13681990.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC5E]
gi|419143072|ref|ZP_13687812.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC6A]
gi|419149322|ref|ZP_13693975.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC6B]
gi|419154524|ref|ZP_13699087.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC6C]
gi|419159816|ref|ZP_13704321.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC6D]
gi|419164944|ref|ZP_13709401.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC6E]
gi|419175826|ref|ZP_13719664.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC7B]
gi|419290089|ref|ZP_13832181.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC11A]
gi|419295417|ref|ZP_13837463.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC11B]
gi|419300877|ref|ZP_13842876.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC11C]
gi|419307007|ref|ZP_13848907.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC11D]
gi|419312015|ref|ZP_13853877.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC11E]
gi|419317425|ref|ZP_13859228.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC12A]
gi|419323597|ref|ZP_13865290.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC12B]
gi|419329561|ref|ZP_13871165.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC12C]
gi|419335126|ref|ZP_13876659.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC12D]
gi|419340597|ref|ZP_13882061.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC12E]
gi|419809259|ref|ZP_14334145.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O32:H37
str. P4]
gi|419870520|ref|ZP_14392613.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O103:H2
str. CVM9450]
gi|419938799|ref|ZP_14455610.1| dihydropyrimidine dehydrogenase [Escherichia coli 75]
gi|420270840|ref|ZP_14773198.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA22]
gi|420276165|ref|ZP_14778449.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA40]
gi|420281503|ref|ZP_14783741.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW06591]
gi|420287634|ref|ZP_14789825.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW10246]
gi|420293100|ref|ZP_14795223.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW11039]
gi|420304804|ref|ZP_14806800.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW10119]
gi|420310695|ref|ZP_14812628.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1738]
gi|420316072|ref|ZP_14817948.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1734]
gi|420359209|ref|ZP_14860183.1| dihydroorotate dehydrogenase family domain protein [Shigella sonnei
3226-85]
gi|420363817|ref|ZP_14864701.1| dihydroorotase dehydrogenase family protein [Shigella sonnei
4822-66]
gi|420391873|ref|ZP_14891126.1| dihydroorotase dehydrogenase family protein [Escherichia coli EPEC
C342-62]
gi|421813065|ref|ZP_16248789.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.0416]
gi|421818954|ref|ZP_16254452.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 10.0821]
gi|421824777|ref|ZP_16260144.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK920]
gi|421831677|ref|ZP_16266964.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA7]
gi|422762387|ref|ZP_16816144.1| dihydroorotate dehydrogenase [Escherichia coli E1167]
gi|422766756|ref|ZP_16820483.1| dihydroorotate dehydrogenase [Escherichia coli E1520]
gi|422772005|ref|ZP_16825694.1| dihydroorotate dehydrogenase [Escherichia coli E482]
gi|422786767|ref|ZP_16839506.1| dihydroorotate dehydrogenase [Escherichia coli H489]
gi|422790599|ref|ZP_16843303.1| dihydroorotate dehydrogenase [Escherichia coli TA007]
gi|422819676|ref|ZP_16867887.1| dihydroorotate dehydrogenase [Escherichia coli M919]
gi|423704470|ref|ZP_17678895.1| dihydroorotate dehydrogenase [Escherichia coli H730]
gi|423725739|ref|ZP_17699849.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA31]
gi|424078179|ref|ZP_17815183.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA505]
gi|424084634|ref|ZP_17821144.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA517]
gi|424091119|ref|ZP_17827064.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1996]
gi|424097690|ref|ZP_17833027.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1985]
gi|424103892|ref|ZP_17838691.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1990]
gi|424110594|ref|ZP_17844852.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 93-001]
gi|424116485|ref|ZP_17850349.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA3]
gi|424122700|ref|ZP_17856048.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA5]
gi|424128836|ref|ZP_17861760.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA9]
gi|424135090|ref|ZP_17867576.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA10]
gi|424141689|ref|ZP_17873602.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA14]
gi|424148121|ref|ZP_17879519.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA15]
gi|424153996|ref|ZP_17884972.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA24]
gi|424247821|ref|ZP_17890456.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA25]
gi|424324356|ref|ZP_17896377.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA28]
gi|424450381|ref|ZP_17902106.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA32]
gi|424456579|ref|ZP_17907741.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA33]
gi|424462965|ref|ZP_17913445.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA39]
gi|424469328|ref|ZP_17919174.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA41]
gi|424475868|ref|ZP_17925211.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA42]
gi|424481623|ref|ZP_17930622.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW07945]
gi|424487768|ref|ZP_17936356.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW09098]
gi|424494356|ref|ZP_17942133.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW09195]
gi|424501138|ref|ZP_17948062.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4203]
gi|424507372|ref|ZP_17953802.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4196]
gi|424514695|ref|ZP_17959412.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW14313]
gi|424526854|ref|ZP_17970588.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4421]
gi|424533014|ref|ZP_17976379.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4422]
gi|424539079|ref|ZP_17982048.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4013]
gi|424545098|ref|ZP_17987547.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4402]
gi|424551353|ref|ZP_17993237.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4439]
gi|424557538|ref|ZP_17998975.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4436]
gi|424563883|ref|ZP_18004903.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4437]
gi|424570011|ref|ZP_18010596.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4448]
gi|424576175|ref|ZP_18016278.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1845]
gi|424582018|ref|ZP_18021687.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1863]
gi|425098737|ref|ZP_18501489.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 3.4870]
gi|425104866|ref|ZP_18507195.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 5.2239]
gi|425110767|ref|ZP_18512703.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 6.0172]
gi|425115556|ref|ZP_18517358.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.0566]
gi|425120283|ref|ZP_18521982.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.0569]
gi|425126666|ref|ZP_18527862.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.0586]
gi|425132481|ref|ZP_18533345.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.2524]
gi|425138950|ref|ZP_18539356.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 10.0833]
gi|425144814|ref|ZP_18544823.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 10.0869]
gi|425150858|ref|ZP_18550492.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 88.0221]
gi|425156741|ref|ZP_18556022.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA34]
gi|425163179|ref|ZP_18562074.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA506]
gi|425168843|ref|ZP_18567342.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA507]
gi|425174978|ref|ZP_18573108.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA504]
gi|425181009|ref|ZP_18578715.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1999]
gi|425187272|ref|ZP_18584555.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1997]
gi|425194044|ref|ZP_18590827.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli NE1487]
gi|425200477|ref|ZP_18596707.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli NE037]
gi|425206901|ref|ZP_18602713.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK2001]
gi|425212592|ref|ZP_18608013.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA4]
gi|425218706|ref|ZP_18613697.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA23]
gi|425225234|ref|ZP_18619735.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA49]
gi|425231598|ref|ZP_18625647.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA45]
gi|425237514|ref|ZP_18631244.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TT12B]
gi|425243737|ref|ZP_18637057.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli MA6]
gi|425249857|ref|ZP_18642808.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 5905]
gi|425255717|ref|ZP_18648252.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli CB7326]
gi|425261935|ref|ZP_18653965.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC96038]
gi|425267970|ref|ZP_18659614.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 5412]
gi|425273314|ref|ZP_18664726.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW15901]
gi|425283855|ref|ZP_18674894.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW00353]
gi|425289150|ref|ZP_18679998.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 3006]
gi|425295406|ref|ZP_18685626.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA38]
gi|425318022|ref|ZP_18706832.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1736]
gi|425324121|ref|ZP_18712511.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1737]
gi|425330406|ref|ZP_18718295.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1846]
gi|425336570|ref|ZP_18723977.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1847]
gi|425342978|ref|ZP_18729895.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1848]
gi|425355074|ref|ZP_18741164.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1850]
gi|425361034|ref|ZP_18746707.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1856]
gi|425367205|ref|ZP_18752403.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1862]
gi|425373580|ref|ZP_18758246.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1864]
gi|425386426|ref|ZP_18770006.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1866]
gi|425393149|ref|ZP_18776279.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1868]
gi|425399248|ref|ZP_18781978.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1869]
gi|425405326|ref|ZP_18787582.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1870]
gi|425411730|ref|ZP_18793521.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli NE098]
gi|425418061|ref|ZP_18799355.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK523]
gi|425422965|ref|ZP_18804133.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 0.1288]
gi|425429391|ref|ZP_18810017.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 0.1304]
gi|428947761|ref|ZP_19020067.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 88.1467]
gi|428953863|ref|ZP_19025678.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 88.1042]
gi|428959797|ref|ZP_19031131.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 89.0511]
gi|428966366|ref|ZP_19037144.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 90.0091]
gi|428972274|ref|ZP_19042636.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 90.0039]
gi|428978725|ref|ZP_19048569.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 90.2281]
gi|428984540|ref|ZP_19053952.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 93.0055]
gi|428990621|ref|ZP_19059628.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 93.0056]
gi|428996421|ref|ZP_19065050.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 94.0618]
gi|429002660|ref|ZP_19070821.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 95.0183]
gi|429008802|ref|ZP_19076346.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 95.1288]
gi|429021274|ref|ZP_19087813.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0428]
gi|429027210|ref|ZP_19093243.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0427]
gi|429033419|ref|ZP_19098961.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0939]
gi|429039518|ref|ZP_19104651.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0932]
gi|429045445|ref|ZP_19110176.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0107]
gi|429050816|ref|ZP_19115394.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 97.0003]
gi|429056147|ref|ZP_19120500.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 97.1742]
gi|429061692|ref|ZP_19125731.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 97.0007]
gi|429068000|ref|ZP_19131484.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0672]
gi|429073901|ref|ZP_19137165.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0678]
gi|429079099|ref|ZP_19142246.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0713]
gi|429827100|ref|ZP_19358178.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0109]
gi|429833427|ref|ZP_19363825.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 97.0010]
gi|432370322|ref|ZP_19613409.1| dihydroorotate dehydrogenase [Escherichia coli KTE10]
gi|432417618|ref|ZP_19660223.1| dihydroorotate dehydrogenase [Escherichia coli KTE44]
gi|432450311|ref|ZP_19692576.1| dihydroorotate dehydrogenase [Escherichia coli KTE193]
gi|432485954|ref|ZP_19727870.1| dihydroorotate dehydrogenase [Escherichia coli KTE212]
gi|432526924|ref|ZP_19764018.1| dihydroorotate dehydrogenase [Escherichia coli KTE233]
gi|432534420|ref|ZP_19771396.1| dihydroorotate dehydrogenase [Escherichia coli KTE234]
gi|432576425|ref|ZP_19812886.1| dihydroorotate dehydrogenase [Escherichia coli KTE56]
gi|432627798|ref|ZP_19863775.1| dihydroorotate dehydrogenase [Escherichia coli KTE77]
gi|432637393|ref|ZP_19873264.1| dihydroorotate dehydrogenase [Escherichia coli KTE81]
gi|432661380|ref|ZP_19897026.1| dihydroorotate dehydrogenase [Escherichia coli KTE111]
gi|432671219|ref|ZP_19906749.1| dihydroorotate dehydrogenase [Escherichia coli KTE119]
gi|432675266|ref|ZP_19910726.1| dihydroorotate dehydrogenase [Escherichia coli KTE142]
gi|432685979|ref|ZP_19921277.1| dihydroorotate dehydrogenase [Escherichia coli KTE156]
gi|432692120|ref|ZP_19927349.1| dihydroorotate dehydrogenase [Escherichia coli KTE161]
gi|432704937|ref|ZP_19940039.1| dihydroorotate dehydrogenase [Escherichia coli KTE171]
gi|432737661|ref|ZP_19972420.1| dihydroorotate dehydrogenase [Escherichia coli KTE42]
gi|432875674|ref|ZP_20093947.1| dihydroorotate dehydrogenase [Escherichia coli KTE154]
gi|432948028|ref|ZP_20143184.1| dihydroorotate dehydrogenase [Escherichia coli KTE196]
gi|432955604|ref|ZP_20147544.1| dihydroorotate dehydrogenase [Escherichia coli KTE197]
gi|433033990|ref|ZP_20221706.1| dihydroorotate dehydrogenase [Escherichia coli KTE112]
gi|433043730|ref|ZP_20231226.1| dihydroorotate dehydrogenase [Escherichia coli KTE117]
gi|433048525|ref|ZP_20235879.1| dihydroorotate dehydrogenase [Escherichia coli KTE120]
gi|433174069|ref|ZP_20358595.1| dihydroorotate dehydrogenase [Escherichia coli KTE232]
gi|442592254|ref|ZP_21010234.1| Dihydropyrimidine dehydrogenase [NADP+] [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|442600047|ref|ZP_21017747.1| Dihydropyrimidine dehydrogenase [NADP+] [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|444925688|ref|ZP_21245004.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 09BKT078844]
gi|444931392|ref|ZP_21250449.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0814]
gi|444936801|ref|ZP_21255596.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0815]
gi|444942429|ref|ZP_21260965.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0816]
gi|444953498|ref|ZP_21271609.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0848]
gi|444958971|ref|ZP_21276840.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1753]
gi|444964147|ref|ZP_21281779.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1775]
gi|444975380|ref|ZP_21292526.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1805]
gi|444980852|ref|ZP_21297771.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli ATCC 700728]
gi|444986202|ref|ZP_21302995.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA11]
gi|444991518|ref|ZP_21308174.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA19]
gi|444996809|ref|ZP_21313320.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA13]
gi|445002365|ref|ZP_21318765.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA2]
gi|445007865|ref|ZP_21324118.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA47]
gi|445012897|ref|ZP_21329015.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA48]
gi|445018773|ref|ZP_21334749.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA8]
gi|445024285|ref|ZP_21340120.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 7.1982]
gi|445029558|ref|ZP_21345246.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1781]
gi|445035018|ref|ZP_21350560.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1762]
gi|445040644|ref|ZP_21356033.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA35]
gi|445045841|ref|ZP_21361105.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 3.4880]
gi|445051414|ref|ZP_21366479.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 95.0083]
gi|445057174|ref|ZP_21372044.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0670]
gi|450190516|ref|ZP_21890875.1| dihydropyrimidine dehydrogenase [Escherichia coli SEPT362]
gi|450245461|ref|ZP_21900641.1| dihydropyrimidine dehydrogenase [Escherichia coli S17]
gi|452971353|ref|ZP_21969580.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O157:H7
str. EC4009]
gi|3183568|sp|P25889.3|PREA_ECOLI RecName: Full=NAD-dependent dihydropyrimidine dehydrogenase subunit
PreA; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|85675261|dbj|BAE76624.1| predicted oxidoreductase [Escherichia coli str. K12 substr. W3110]
gi|87082059|gb|AAC75208.2| dihydropyrimidine dehydrogenase, NADH-dependent, subunit C
[Escherichia coli str. K-12 substr. MG1655]
gi|157067307|gb|ABV06562.1| dihydroorotate dehydrogenase family protein [Escherichia coli HS]
gi|169889605|gb|ACB03312.1| predicted oxidoreductase [Escherichia coli str. K-12 substr. DH10B]
gi|187771295|gb|EDU35139.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4196]
gi|188015281|gb|EDU53403.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4113]
gi|188491295|gb|EDU66398.1| dihydroorotate dehydrogenase family protein [Escherichia coli
53638]
gi|189001874|gb|EDU70860.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4076]
gi|189355322|gb|EDU73741.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4401]
gi|189362895|gb|EDU81314.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4486]
gi|189366084|gb|EDU84500.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4501]
gi|189371361|gb|EDU89777.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC869]
gi|189376637|gb|EDU95053.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC508]
gi|192931943|gb|EDV84542.1| dihydroorotate dehydrogenase family protein [Escherichia coli E22]
gi|192955608|gb|EDV86085.1| dihydroorotate dehydrogenase family protein [Escherichia coli
E110019]
gi|194414806|gb|EDX31077.1| dihydroorotate dehydrogenase family protein [Escherichia coli B171]
gi|194424744|gb|EDX40729.1| dihydroorotate dehydrogenase family protein [Escherichia coli
101-1]
gi|208726988|gb|EDZ76589.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4206]
gi|208735466|gb|EDZ84153.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4045]
gi|208739634|gb|EDZ87316.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4042]
gi|209157737|gb|ACI35170.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. EC4115]
gi|217319752|gb|EEC28177.1| dihydroorotate dehydrogenase family protein [Escherichia coli
O157:H7 str. TW14588]
gi|238862745|gb|ACR64743.1| predicted oxidoreductase [Escherichia coli BW2952]
gi|242377789|emb|CAQ32552.1| NADH-dependent dihydropyrimidine dehydrogenase subunit, subunit of
NAD-dependent dihydropyrimidine dehydrogenase
[Escherichia coli BL21(DE3)]
gi|253323970|gb|ACT28572.1| dihydroorotate dehydrogenase family protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974062|gb|ACT39733.1| dihydropyrimidine dehydrogenase [Escherichia coli B str. REL606]
gi|253978230|gb|ACT43900.1| dihydropyrimidine dehydrogenase [Escherichia coli BL21(DE3)]
gi|254593446|gb|ACT72807.1| predicted oxidoreductase [Escherichia coli O157:H7 str. TW14359]
gi|257759900|dbj|BAI31397.1| predicted oxidoreductase [Escherichia coli O103:H2 str. 12009]
gi|260448759|gb|ACX39181.1| dihydroorotate dehydrogenase family protein [Escherichia coli DH1]
gi|290763274|gb|ADD57235.1| putative oxidoreductase [Escherichia coli O55:H7 str. CB9615]
gi|300317298|gb|EFJ67082.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 175-1]
gi|300450584|gb|EFK14204.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 116-1]
gi|300461698|gb|EFK25191.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 187-1]
gi|301077462|gb|EFK92268.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 146-1]
gi|310332199|gb|EFP99434.1| uncharacterized protein yeiA [Escherichia coli 1827-70]
gi|315136780|dbj|BAJ43939.1| putative oxidoreductase [Escherichia coli DH1]
gi|320192230|gb|EFW66875.1| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
EC1212]
gi|320641218|gb|EFX10696.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O157:H7
str. G5101]
gi|320646606|gb|EFX15517.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O157:H-
str. 493-89]
gi|320651861|gb|EFX20236.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O157:H-
str. H 2687]
gi|320657585|gb|EFX25383.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320663191|gb|EFX30500.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O55:H7
str. USDA 5905]
gi|320667942|gb|EFX34845.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O157:H7
str. LSU-61]
gi|323161774|gb|EFZ47655.1| hypothetical protein ECE128010_2020 [Escherichia coli E128010]
gi|323168713|gb|EFZ54393.1| hypothetical protein SS53G_1042 [Shigella sonnei 53G]
gi|323936761|gb|EGB33046.1| dihydroorotate dehydrogenase [Escherichia coli E1520]
gi|323940784|gb|EGB36972.1| dihydroorotate dehydrogenase [Escherichia coli E482]
gi|323961611|gb|EGB57217.1| dihydroorotate dehydrogenase [Escherichia coli H489]
gi|323972971|gb|EGB68168.1| dihydroorotate dehydrogenase [Escherichia coli TA007]
gi|324118013|gb|EGC11912.1| dihydroorotate dehydrogenase [Escherichia coli E1167]
gi|326339497|gb|EGD63308.1| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
1125]
gi|326343958|gb|EGD67719.1| dihydropyrimidine dehydrogenase [Escherichia coli O157:H7 str.
1044]
gi|331039570|gb|EGI11790.1| putative oxidoreductase [Escherichia coli H736]
gi|331078776|gb|EGI49978.1| putative oxidoreductase [Escherichia coli H299]
gi|332343925|gb|AEE57259.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|339415613|gb|AEJ57285.1| uncharacterized protein yeiA [Escherichia coli UMNF18]
gi|342363662|gb|EGU27768.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli XH140A]
gi|344193406|gb|EGV47487.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli XH001]
gi|345361803|gb|EGW93960.1| hypothetical protein ECSTECEH250_2667 [Escherichia coli STEC_EH250]
gi|345375454|gb|EGX07401.1| hypothetical protein ECG581_2546 [Escherichia coli G58-1]
gi|345377000|gb|EGX08932.1| hypothetical protein ECSTECH18_2793 [Escherichia coli STEC_H.1.8]
gi|345387356|gb|EGX17178.1| hypothetical protein ECSTECS1191_2993 [Escherichia coli STEC_S1191]
gi|359332494|dbj|BAL38941.1| predicted oxidoreductase [Escherichia coli str. K-12 substr. MDS42]
gi|374359531|gb|AEZ41238.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O55:H7
str. RM12579]
gi|377893418|gb|EHU57857.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3A]
gi|377893545|gb|EHU57979.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3B]
gi|377905158|gb|EHU69432.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3C]
gi|377909832|gb|EHU74030.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3D]
gi|377912462|gb|EHU76621.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3E]
gi|377921549|gb|EHU85545.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC3F]
gi|377925981|gb|EHU89916.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4A]
gi|377930649|gb|EHU94529.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4B]
gi|377942235|gb|EHV05970.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4C]
gi|377942689|gb|EHV06422.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4D]
gi|377947192|gb|EHV10859.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4E]
gi|377957443|gb|EHV20975.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC4F]
gi|377961261|gb|EHV24735.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC5A]
gi|377967050|gb|EHV30457.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC5B]
gi|377975069|gb|EHV38391.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC5C]
gi|377975728|gb|EHV39045.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC5D]
gi|377984187|gb|EHV47422.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC5E]
gi|377992444|gb|EHV55591.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC6B]
gi|377994355|gb|EHV57482.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC6A]
gi|377997106|gb|EHV60213.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC6C]
gi|378007160|gb|EHV70129.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC6D]
gi|378011026|gb|EHV73971.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC6E]
gi|378033229|gb|EHV95809.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC7B]
gi|378129890|gb|EHW91260.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC11A]
gi|378142504|gb|EHX03706.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC11B]
gi|378148994|gb|EHX10127.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC11D]
gi|378150493|gb|EHX11608.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC11C]
gi|378157643|gb|EHX18674.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC11E]
gi|378164673|gb|EHX25614.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC12B]
gi|378169008|gb|EHX29908.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC12A]
gi|378169877|gb|EHX30763.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC12C]
gi|378182205|gb|EHX42858.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC12D]
gi|378187508|gb|EHX48119.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC12E]
gi|384380140|gb|EIE38007.1| putative protein yeiA [Escherichia coli J53]
gi|385158189|gb|EIF20179.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O32:H37
str. P4]
gi|385536778|gb|EIF83664.1| dihydroorotate dehydrogenase [Escherichia coli M919]
gi|385706387|gb|EIG43428.1| dihydroorotate dehydrogenase [Escherichia coli H730]
gi|386121357|gb|EIG69972.1| dihydroorotate dehydrogenase [Escherichia sp. 4_1_40B]
gi|386176776|gb|EIH54255.1| dihydropyrimidine dehydrogenase [Escherichia coli 3.2608]
gi|386184318|gb|EIH67057.1| dihydropyrimidine dehydrogenase [Escherichia coli 93.0624]
gi|386204501|gb|EII09012.1| dihydropyrimidine dehydrogenase [Escherichia coli 5.0959]
gi|386215564|gb|EII32056.1| dihydropyrimidine dehydrogenase [Escherichia coli 4.0967]
gi|386226492|gb|EII48794.1| dihydropyrimidine dehydrogenase [Escherichia coli 2.3916]
gi|386236644|gb|EII68620.1| dihydropyrimidine dehydrogenase [Escherichia coli 2.4168]
gi|386240557|gb|EII77480.1| dihydropyrimidine dehydrogenase [Escherichia coli 3.2303]
gi|386254629|gb|EIJ04319.1| dihydropyrimidine dehydrogenase [Escherichia coli B41]
gi|386796828|gb|AFJ29862.1| dihydropyrimidine dehydrogenase [Escherichia coli Xuzhou21]
gi|388339321|gb|EIL05706.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli O103:H2
str. CVM9450]
gi|388409334|gb|EIL69630.1| dihydropyrimidine dehydrogenase [Escherichia coli 75]
gi|390641658|gb|EIN21082.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1996]
gi|390643115|gb|EIN22478.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA517]
gi|390644145|gb|EIN23438.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA505]
gi|390660809|gb|EIN38499.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 93-001]
gi|390662377|gb|EIN39981.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1985]
gi|390664114|gb|EIN41576.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1990]
gi|390677917|gb|EIN53917.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA3]
gi|390681130|gb|EIN56934.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA5]
gi|390683816|gb|EIN59468.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA9]
gi|390697038|gb|EIN71472.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA10]
gi|390701080|gb|EIN75335.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA15]
gi|390701790|gb|EIN76008.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA14]
gi|390714352|gb|EIN87266.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA22]
gi|390723137|gb|EIN95757.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA25]
gi|390724632|gb|EIN97181.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA24]
gi|390727899|gb|EIO00282.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA28]
gi|390743076|gb|EIO14063.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA31]
gi|390743364|gb|EIO14341.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA32]
gi|390745832|gb|EIO16612.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA33]
gi|390757575|gb|EIO27045.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA40]
gi|390767774|gb|EIO36840.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA41]
gi|390769115|gb|EIO38067.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA39]
gi|390769563|gb|EIO38490.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA42]
gi|390781790|gb|EIO49467.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW06591]
gi|390790391|gb|EIO57819.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW10246]
gi|390791436|gb|EIO58827.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW07945]
gi|390797186|gb|EIO64442.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW11039]
gi|390806545|gb|EIO73448.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW09098]
gi|390815826|gb|EIO82338.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW10119]
gi|390826200|gb|EIO92056.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4203]
gi|390830871|gb|EIO96358.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW09195]
gi|390831589|gb|EIO96957.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4196]
gi|390847472|gb|EIP11014.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW14313]
gi|390850922|gb|EIP14263.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4421]
gi|390861620|gb|EIP23864.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4422]
gi|390865822|gb|EIP27816.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4013]
gi|390871125|gb|EIP32567.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4402]
gi|390878901|gb|EIP39711.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4439]
gi|390883913|gb|EIP44302.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4436]
gi|390893927|gb|EIP53461.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4437]
gi|390896174|gb|EIP55565.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC4448]
gi|390899974|gb|EIP59210.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1738]
gi|390908062|gb|EIP66903.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1734]
gi|390919523|gb|EIP77872.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1863]
gi|390920492|gb|EIP78760.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1845]
gi|391281890|gb|EIQ40527.1| dihydroorotate dehydrogenase family domain protein [Shigella sonnei
3226-85]
gi|391284495|gb|EIQ43090.1| dihydroorotate dehydrogenase family domain protein [Shigella sonnei
3233-85]
gi|391294061|gb|EIQ52314.1| dihydroorotase dehydrogenase family protein [Shigella sonnei
4822-66]
gi|391312554|gb|EIQ70162.1| dihydroorotase dehydrogenase family protein [Escherichia coli EPEC
C342-62]
gi|397899732|gb|EJL16104.1| dihydroorotase dehydrogenase family protein [Shigella sonnei str.
Moseley]
gi|404290980|gb|EJZ47878.1| dihydroorotate dehydrogenase [Escherichia sp. 1_1_43]
gi|408064049|gb|EKG98531.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA7]
gi|408067829|gb|EKH02257.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK920]
gi|408071125|gb|EKH05478.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA34]
gi|408078767|gb|EKH12895.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA506]
gi|408083075|gb|EKH16993.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA507]
gi|408091336|gb|EKH24567.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FDA504]
gi|408097449|gb|EKH30340.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1999]
gi|408104154|gb|EKH36476.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK1997]
gi|408108385|gb|EKH40388.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli NE1487]
gi|408115105|gb|EKH46571.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli NE037]
gi|408121218|gb|EKH52179.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK2001]
gi|408127763|gb|EKH58200.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA4]
gi|408138727|gb|EKH68383.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA23]
gi|408140404|gb|EKH69920.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA49]
gi|408145999|gb|EKH75142.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA45]
gi|408155355|gb|EKH83678.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TT12B]
gi|408160016|gb|EKH88060.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli MA6]
gi|408164024|gb|EKH91864.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 5905]
gi|408173490|gb|EKI00510.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli CB7326]
gi|408180602|gb|EKI07207.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC96038]
gi|408183031|gb|EKI09505.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 5412]
gi|408193096|gb|EKI18649.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW15901]
gi|408201545|gb|EKI26694.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW00353]
gi|408213702|gb|EKI38181.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 3006]
gi|408217964|gb|EKI42198.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA38]
gi|408238681|gb|EKI61467.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1736]
gi|408243090|gb|EKI65634.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1737]
gi|408247468|gb|EKI69668.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1846]
gi|408256551|gb|EKI77926.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1847]
gi|408259253|gb|EKI80440.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1848]
gi|408275085|gb|EKI95067.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1850]
gi|408277230|gb|EKI97040.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1856]
gi|408287065|gb|EKJ05961.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1862]
gi|408291233|gb|EKJ09867.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1864]
gi|408308278|gb|EKJ25548.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1868]
gi|408308433|gb|EKJ25702.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1866]
gi|408319443|gb|EKJ35579.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1869]
gi|408326178|gb|EKJ42002.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1870]
gi|408326827|gb|EKJ42596.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli NE098]
gi|408336886|gb|EKJ51634.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli FRIK523]
gi|408343520|gb|EKJ57914.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 0.1288]
gi|408346644|gb|EKJ60930.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 0.1304]
gi|408550016|gb|EKK27361.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 5.2239]
gi|408550778|gb|EKK28094.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 3.4870]
gi|408551336|gb|EKK28617.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 6.0172]
gi|408568236|gb|EKK44269.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.0566]
gi|408569325|gb|EKK45322.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.0569]
gi|408570191|gb|EKK46171.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.0586]
gi|408579848|gb|EKK55296.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 10.0833]
gi|408581486|gb|EKK56821.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.2524]
gi|408591535|gb|EKK65956.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 10.0869]
gi|408596581|gb|EKK70706.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 88.0221]
gi|408601371|gb|EKK75174.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 8.0416]
gi|408612711|gb|EKK86045.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 10.0821]
gi|427205012|gb|EKV75272.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 88.1042]
gi|427207386|gb|EKV77555.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 89.0511]
gi|427208620|gb|EKV78709.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 88.1467]
gi|427222183|gb|EKV90975.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 90.0091]
gi|427224699|gb|EKV93398.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 90.2281]
gi|427228016|gb|EKV96500.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 90.0039]
gi|427242249|gb|EKW09664.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 93.0056]
gi|427242842|gb|EKW10239.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 93.0055]
gi|427246402|gb|EKW13616.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 94.0618]
gi|427261658|gb|EKW27575.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 95.0183]
gi|427264980|gb|EKW30607.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 95.1288]
gi|427276836|gb|EKW41401.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0428]
gi|427279613|gb|EKW44024.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0427]
gi|427283381|gb|EKW47589.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0939]
gi|427292143|gb|EKW55499.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0932]
gi|427299537|gb|EKW62508.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0107]
gi|427300742|gb|EKW63667.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 97.0003]
gi|427313630|gb|EKW75728.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 97.1742]
gi|427315978|gb|EKW77952.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 97.0007]
gi|427319690|gb|EKW81493.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0672]
gi|427328507|gb|EKW89869.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0678]
gi|427329429|gb|EKW90755.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0713]
gi|429254174|gb|EKY38614.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 96.0109]
gi|429255899|gb|EKY40180.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 97.0010]
gi|430884988|gb|ELC07918.1| dihydroorotate dehydrogenase [Escherichia coli KTE10]
gi|430939131|gb|ELC59348.1| dihydroorotate dehydrogenase [Escherichia coli KTE44]
gi|430979701|gb|ELC96466.1| dihydroorotate dehydrogenase [Escherichia coli KTE193]
gi|431016351|gb|ELD29898.1| dihydroorotate dehydrogenase [Escherichia coli KTE212]
gi|431060647|gb|ELD69973.1| dihydroorotate dehydrogenase [Escherichia coli KTE234]
gi|431063582|gb|ELD72821.1| dihydroorotate dehydrogenase [Escherichia coli KTE233]
gi|431115344|gb|ELE18868.1| dihydroorotate dehydrogenase [Escherichia coli KTE56]
gi|431163167|gb|ELE63603.1| dihydroorotate dehydrogenase [Escherichia coli KTE77]
gi|431171288|gb|ELE71467.1| dihydroorotate dehydrogenase [Escherichia coli KTE81]
gi|431200496|gb|ELE99222.1| dihydroorotate dehydrogenase [Escherichia coli KTE111]
gi|431210534|gb|ELF08589.1| dihydroorotate dehydrogenase [Escherichia coli KTE119]
gi|431214242|gb|ELF12067.1| dihydroorotate dehydrogenase [Escherichia coli KTE142]
gi|431222152|gb|ELF19443.1| dihydroorotate dehydrogenase [Escherichia coli KTE156]
gi|431226914|gb|ELF24064.1| dihydroorotate dehydrogenase [Escherichia coli KTE161]
gi|431243166|gb|ELF37555.1| dihydroorotate dehydrogenase [Escherichia coli KTE171]
gi|431282554|gb|ELF73434.1| dihydroorotate dehydrogenase [Escherichia coli KTE42]
gi|431420620|gb|ELH02904.1| dihydroorotate dehydrogenase [Escherichia coli KTE154]
gi|431458006|gb|ELH38343.1| dihydroorotate dehydrogenase [Escherichia coli KTE196]
gi|431468275|gb|ELH48281.1| dihydroorotate dehydrogenase [Escherichia coli KTE197]
gi|431550996|gb|ELI24983.1| dihydroorotate dehydrogenase [Escherichia coli KTE112]
gi|431556051|gb|ELI29886.1| dihydroorotate dehydrogenase [Escherichia coli KTE117]
gi|431564668|gb|ELI37837.1| dihydroorotate dehydrogenase [Escherichia coli KTE120]
gi|431692157|gb|ELJ57596.1| dihydroorotate dehydrogenase [Escherichia coli KTE232]
gi|441608407|emb|CCP99260.1| Dihydropyrimidine dehydrogenase [NADP+] [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|441651100|emb|CCQ03237.1| Dihydropyrimidine dehydrogenase [NADP+] [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|444538629|gb|ELV18476.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0814]
gi|444540120|gb|ELV19819.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 09BKT078844]
gi|444547779|gb|ELV26336.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0815]
gi|444558842|gb|ELV36103.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0816]
gi|444563812|gb|ELV40788.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0848]
gi|444573490|gb|ELV49855.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1753]
gi|444577963|gb|ELV54056.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1775]
gi|444593647|gb|ELV68854.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli ATCC 700728]
gi|444593907|gb|ELV69111.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA11]
gi|444596157|gb|ELV71240.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1805]
gi|444607365|gb|ELV81943.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA13]
gi|444607672|gb|ELV82240.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA19]
gi|444616224|gb|ELV90392.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA2]
gi|444624129|gb|ELV98034.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA47]
gi|444624539|gb|ELV98421.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA48]
gi|444630169|gb|ELW03834.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA8]
gi|444638989|gb|ELW12310.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 7.1982]
gi|444641893|gb|ELW15109.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1781]
gi|444645522|gb|ELW18584.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1762]
gi|444654719|gb|ELW27366.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli PA35]
gi|444660138|gb|ELW32511.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 3.4880]
gi|444665141|gb|ELW37284.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 95.0083]
gi|444669923|gb|ELW41857.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.0670]
gi|449320351|gb|EMD10384.1| dihydropyrimidine dehydrogenase [Escherichia coli S17]
gi|449320494|gb|EMD10525.1| dihydropyrimidine dehydrogenase [Escherichia coli SEPT362]
Length = 411
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|393199488|ref|YP_006461330.1| dihydroorotate dehydrogenase [Solibacillus silvestris StLB046]
gi|327438819|dbj|BAK15184.1| dihydroorotate dehydrogenase [Solibacillus silvestris StLB046]
Length = 427
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 201/339 (59%), Gaps = 15/339 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL I G++ PNPF + S PP + ++RAF+ GWG V KT+ ++NV+ R+A
Sbjct: 3 DLRIDFAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GDPILNVSSRFA 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ + G+ NIELI+DRPLE LKE + K +PD +IAS+M E
Sbjct: 60 AV------SFNGQKVAGFNNIELITDRPLEVNLKEIYETKKRFPDHTIIASLMVEPKAEK 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ RV++ G+D E+NF CPHGM ER MGAA GQ L+E+ W A VPV K
Sbjct: 114 WHEIVKRVQDVGVDGFELNFGCPHGMAERGMGAASGQVPELVEKQTYWAKEYAEVPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT A A+R G++ +S INTI S+ G+DL + P V GGY AV
Sbjct: 174 LTPNITDITVTAEAAVRGGADAISMINTINSLAGVDLNSWNTIPHVGNKGAHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V A +S + + +SGIGG+ DAAEFIL+G+ +VQVCT M HG+
Sbjct: 234 KPIALNMVGECA---RSPY--INLPISGIGGISNWQDAAEFILMGSTSVQVCTAAMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
G+V+ + + L +++ +S+ D G ++ ++ +L
Sbjct: 289 GIVEDMIDGLNNYLDDKGLASVMDLVGKTVPKYSDWGDL 327
>gi|293415430|ref|ZP_06658073.1| yeiA protein [Escherichia coli B185]
gi|291433078|gb|EFF06057.1| yeiA protein [Escherichia coli B185]
Length = 411
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|399001146|ref|ZP_10703864.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM18]
gi|398128339|gb|EJM17730.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM18]
Length = 424
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/352 (42%), Positives = 215/352 (61%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G+ NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVMGFNNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KNILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ ++L+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVANPAVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ +SGIGG+ + DAAEFI LG+ +VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPISGIGGIGSWRDAAEFIALGSGSVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M ++S+ DF G ++ +Y + +++ ++ QEA
Sbjct: 293 IVEEMKDGLSRWMDSQGYTSVSDFTGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|110642356|ref|YP_670086.1| dihydropyrimidine dehydrogenase [Escherichia coli 536]
gi|117624348|ref|YP_853261.1| dihydropyrimidine dehydrogenase [Escherichia coli APEC O1]
gi|161486180|ref|NP_754568.2| dihydropyrimidine dehydrogenase [Escherichia coli CFT073]
gi|191170189|ref|ZP_03031743.1| dihydroorotate dehydrogenase family protein [Escherichia coli F11]
gi|218559065|ref|YP_002391978.1| dihydropyrimidine dehydrogenase [Escherichia coli S88]
gi|227887202|ref|ZP_04005007.1| dihydropyrimidine dehydrogenase [Escherichia coli 83972]
gi|300981478|ref|ZP_07175559.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 200-1]
gi|300982861|ref|ZP_07176325.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 45-1]
gi|301048883|ref|ZP_07195876.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 185-1]
gi|306814738|ref|ZP_07448900.1| dihydropyrimidine dehydrogenase [Escherichia coli NC101]
gi|331658226|ref|ZP_08359188.1| putative oxidoreductase [Escherichia coli TA206]
gi|386600025|ref|YP_006101531.1| dihydroorotate dehydrogenase family protein [Escherichia coli
IHE3034]
gi|386603828|ref|YP_006110128.1| dihydropyrimidine dehydrogenase [Escherichia coli UM146]
gi|386629937|ref|YP_006149657.1| dihydropyrimidine dehydrogenase [Escherichia coli str. 'clone D
i2']
gi|386634857|ref|YP_006154576.1| dihydropyrimidine dehydrogenase [Escherichia coli str. 'clone D
i14']
gi|386639724|ref|YP_006106522.1| dihydroorotate dehydrogenase family protein [Escherichia coli ABU
83972]
gi|416898181|ref|ZP_11927745.1| hypothetical protein ECSTEC7V_2552 [Escherichia coli STEC_7v]
gi|417085409|ref|ZP_11952837.1| dihydropyrimidine dehydrogenase [Escherichia coli cloneA_i1]
gi|417115509|ref|ZP_11966645.1| dihydropyrimidine dehydrogenase [Escherichia coli 1.2741]
gi|417286589|ref|ZP_12073878.1| dihydropyrimidine dehydrogenase [Escherichia coli TW07793]
gi|419700984|ref|ZP_14228586.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli SCI-07]
gi|419947078|ref|ZP_14463440.1| dihydropyrimidine dehydrogenase [Escherichia coli HM605]
gi|422360420|ref|ZP_16441054.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 110-3]
gi|422362782|ref|ZP_16443334.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 153-1]
gi|422370292|ref|ZP_16450686.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 16-3]
gi|422374735|ref|ZP_16455010.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 60-1]
gi|422749428|ref|ZP_16803340.1| dihydroorotate dehydrogenase [Escherichia coli H252]
gi|422755568|ref|ZP_16809392.1| dihydroorotate dehydrogenase [Escherichia coli H263]
gi|422799427|ref|ZP_16847926.1| dihydroorotate dehydrogenase [Escherichia coli M863]
gi|422804834|ref|ZP_16853266.1| dihydroorotate dehydrogenase [Escherichia fergusonii B253]
gi|422837797|ref|ZP_16885770.1| hypothetical protein ESPG_00456 [Escherichia coli H397]
gi|432358492|ref|ZP_19601718.1| dihydroorotate dehydrogenase [Escherichia coli KTE4]
gi|432363226|ref|ZP_19606393.1| dihydroorotate dehydrogenase [Escherichia coli KTE5]
gi|432381888|ref|ZP_19624831.1| dihydroorotate dehydrogenase [Escherichia coli KTE15]
gi|432387700|ref|ZP_19630589.1| dihydroorotate dehydrogenase [Escherichia coli KTE16]
gi|432412361|ref|ZP_19655024.1| dihydroorotate dehydrogenase [Escherichia coli KTE39]
gi|432432436|ref|ZP_19674865.1| dihydroorotate dehydrogenase [Escherichia coli KTE187]
gi|432436874|ref|ZP_19679262.1| dihydroorotate dehydrogenase [Escherichia coli KTE188]
gi|432457255|ref|ZP_19699439.1| dihydroorotate dehydrogenase [Escherichia coli KTE201]
gi|432466241|ref|ZP_19708330.1| dihydroorotate dehydrogenase [Escherichia coli KTE205]
gi|432471514|ref|ZP_19713560.1| dihydroorotate dehydrogenase [Escherichia coli KTE206]
gi|432496255|ref|ZP_19738051.1| dihydroorotate dehydrogenase [Escherichia coli KTE214]
gi|432504977|ref|ZP_19746701.1| dihydroorotate dehydrogenase [Escherichia coli KTE220]
gi|432514450|ref|ZP_19751674.1| dihydroorotate dehydrogenase [Escherichia coli KTE224]
gi|432524346|ref|ZP_19761474.1| dihydroorotate dehydrogenase [Escherichia coli KTE230]
gi|432569228|ref|ZP_19805740.1| dihydroorotate dehydrogenase [Escherichia coli KTE53]
gi|432574228|ref|ZP_19810708.1| dihydroorotate dehydrogenase [Escherichia coli KTE55]
gi|432584404|ref|ZP_19820798.1| dihydroorotate dehydrogenase [Escherichia coli KTE57]
gi|432588476|ref|ZP_19824832.1| dihydroorotate dehydrogenase [Escherichia coli KTE58]
gi|432593413|ref|ZP_19829730.1| dihydroorotate dehydrogenase [Escherichia coli KTE60]
gi|432598135|ref|ZP_19834411.1| dihydroorotate dehydrogenase [Escherichia coli KTE62]
gi|432608035|ref|ZP_19844220.1| dihydroorotate dehydrogenase [Escherichia coli KTE67]
gi|432611957|ref|ZP_19848119.1| dihydroorotate dehydrogenase [Escherichia coli KTE72]
gi|432646719|ref|ZP_19882509.1| dihydroorotate dehydrogenase [Escherichia coli KTE86]
gi|432651703|ref|ZP_19887457.1| dihydroorotate dehydrogenase [Escherichia coli KTE87]
gi|432656302|ref|ZP_19892006.1| dihydroorotate dehydrogenase [Escherichia coli KTE93]
gi|432699579|ref|ZP_19934733.1| dihydroorotate dehydrogenase [Escherichia coli KTE169]
gi|432713926|ref|ZP_19948966.1| dihydroorotate dehydrogenase [Escherichia coli KTE8]
gi|432746190|ref|ZP_19980856.1| dihydroorotate dehydrogenase [Escherichia coli KTE43]
gi|432754963|ref|ZP_19989513.1| dihydroorotate dehydrogenase [Escherichia coli KTE22]
gi|432779088|ref|ZP_20013331.1| dihydroorotate dehydrogenase [Escherichia coli KTE59]
gi|432784096|ref|ZP_20018275.1| dihydroorotate dehydrogenase [Escherichia coli KTE63]
gi|432788035|ref|ZP_20022167.1| dihydroorotate dehydrogenase [Escherichia coli KTE65]
gi|432802365|ref|ZP_20036344.1| dihydroorotate dehydrogenase [Escherichia coli KTE84]
gi|432821484|ref|ZP_20055176.1| dihydroorotate dehydrogenase [Escherichia coli KTE118]
gi|432827616|ref|ZP_20061268.1| dihydroorotate dehydrogenase [Escherichia coli KTE123]
gi|432845118|ref|ZP_20077951.1| dihydroorotate dehydrogenase [Escherichia coli KTE141]
gi|432899167|ref|ZP_20109859.1| dihydroorotate dehydrogenase [Escherichia coli KTE192]
gi|432905407|ref|ZP_20114274.1| dihydroorotate dehydrogenase [Escherichia coli KTE194]
gi|432938499|ref|ZP_20136777.1| dihydroorotate dehydrogenase [Escherichia coli KTE183]
gi|432972351|ref|ZP_20161218.1| dihydroorotate dehydrogenase [Escherichia coli KTE207]
gi|432974296|ref|ZP_20163135.1| dihydroorotate dehydrogenase [Escherichia coli KTE209]
gi|432985907|ref|ZP_20174630.1| dihydroorotate dehydrogenase [Escherichia coli KTE215]
gi|432995884|ref|ZP_20184489.1| dihydroorotate dehydrogenase [Escherichia coli KTE218]
gi|433000453|ref|ZP_20188978.1| dihydroorotate dehydrogenase [Escherichia coli KTE223]
gi|433005606|ref|ZP_20194035.1| dihydroorotate dehydrogenase [Escherichia coli KTE227]
gi|433008189|ref|ZP_20196606.1| dihydroorotate dehydrogenase [Escherichia coli KTE229]
gi|433029124|ref|ZP_20216983.1| dihydroorotate dehydrogenase [Escherichia coli KTE109]
gi|433039148|ref|ZP_20226747.1| dihydroorotate dehydrogenase [Escherichia coli KTE113]
gi|433058667|ref|ZP_20245713.1| dihydroorotate dehydrogenase [Escherichia coli KTE124]
gi|433073340|ref|ZP_20259995.1| dihydroorotate dehydrogenase [Escherichia coli KTE129]
gi|433078324|ref|ZP_20264862.1| dihydroorotate dehydrogenase [Escherichia coli KTE131]
gi|433083106|ref|ZP_20269563.1| dihydroorotate dehydrogenase [Escherichia coli KTE133]
gi|433087828|ref|ZP_20274199.1| dihydroorotate dehydrogenase [Escherichia coli KTE137]
gi|433101694|ref|ZP_20287780.1| dihydroorotate dehydrogenase [Escherichia coli KTE145]
gi|433116082|ref|ZP_20301873.1| dihydroorotate dehydrogenase [Escherichia coli KTE153]
gi|433120746|ref|ZP_20306418.1| dihydroorotate dehydrogenase [Escherichia coli KTE157]
gi|433125732|ref|ZP_20311291.1| dihydroorotate dehydrogenase [Escherichia coli KTE160]
gi|433139801|ref|ZP_20325057.1| dihydroorotate dehydrogenase [Escherichia coli KTE167]
gi|433144738|ref|ZP_20329882.1| dihydroorotate dehydrogenase [Escherichia coli KTE168]
gi|433149718|ref|ZP_20334739.1| dihydroorotate dehydrogenase [Escherichia coli KTE174]
gi|433154268|ref|ZP_20339211.1| dihydroorotate dehydrogenase [Escherichia coli KTE176]
gi|433164023|ref|ZP_20348761.1| dihydroorotate dehydrogenase [Escherichia coli KTE179]
gi|433169128|ref|ZP_20353756.1| dihydroorotate dehydrogenase [Escherichia coli KTE180]
gi|433183812|ref|ZP_20368063.1| dihydroorotate dehydrogenase [Escherichia coli KTE85]
gi|433188931|ref|ZP_20373029.1| dihydroorotate dehydrogenase [Escherichia coli KTE88]
gi|433208323|ref|ZP_20391997.1| dihydroorotate dehydrogenase [Escherichia coli KTE97]
gi|433213059|ref|ZP_20396649.1| dihydroorotate dehydrogenase [Escherichia coli KTE99]
gi|442607898|ref|ZP_21022658.1| Dihydropyrimidine dehydrogenase [NADP+] [Escherichia coli Nissle
1917]
gi|110343948|gb|ABG70185.1| putative dihydropyrimidine dehydrogenase [Escherichia coli 536]
gi|115513472|gb|ABJ01547.1| putative dihydropyrimidine dehydrogenase [Escherichia coli APEC O1]
gi|190909705|gb|EDV69290.1| dihydroorotate dehydrogenase family protein [Escherichia coli F11]
gi|218365834|emb|CAR03575.1| putative oxidoreductase subunit [Escherichia coli S88]
gi|227835552|gb|EEJ46018.1| dihydropyrimidine dehydrogenase [Escherichia coli 83972]
gi|294490821|gb|ADE89577.1| dihydroorotate dehydrogenase family protein [Escherichia coli
IHE3034]
gi|300299259|gb|EFJ55644.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 185-1]
gi|300307551|gb|EFJ62071.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 200-1]
gi|300408661|gb|EFJ92199.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 45-1]
gi|305852132|gb|EFM52584.1| dihydropyrimidine dehydrogenase [Escherichia coli NC101]
gi|307554216|gb|ADN46991.1| dihydroorotate dehydrogenase family protein [Escherichia coli ABU
83972]
gi|307626312|gb|ADN70616.1| dihydropyrimidine dehydrogenase [Escherichia coli UM146]
gi|315285782|gb|EFU45222.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 110-3]
gi|315294488|gb|EFU53836.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 153-1]
gi|315297989|gb|EFU57259.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 16-3]
gi|323951943|gb|EGB47817.1| dihydroorotate dehydrogenase [Escherichia coli H252]
gi|323955912|gb|EGB51665.1| dihydroorotate dehydrogenase [Escherichia coli H263]
gi|323968071|gb|EGB63481.1| dihydroorotate dehydrogenase [Escherichia coli M863]
gi|324013972|gb|EGB83191.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 60-1]
gi|324114437|gb|EGC08406.1| dihydroorotate dehydrogenase [Escherichia fergusonii B253]
gi|327252385|gb|EGE64044.1| hypothetical protein ECSTEC7V_2552 [Escherichia coli STEC_7v]
gi|331056474|gb|EGI28483.1| putative oxidoreductase [Escherichia coli TA206]
gi|355351181|gb|EHG00373.1| dihydropyrimidine dehydrogenase [Escherichia coli cloneA_i1]
gi|355420836|gb|AER85033.1| dihydropyrimidine dehydrogenase [Escherichia coli str. 'clone D
i2']
gi|355425756|gb|AER89952.1| dihydropyrimidine dehydrogenase [Escherichia coli str. 'clone D
i14']
gi|371610706|gb|EHN99234.1| hypothetical protein ESPG_00456 [Escherichia coli H397]
gi|380347730|gb|EIA36016.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli SCI-07]
gi|386140928|gb|EIG82080.1| dihydropyrimidine dehydrogenase [Escherichia coli 1.2741]
gi|386250048|gb|EII96217.1| dihydropyrimidine dehydrogenase [Escherichia coli TW07793]
gi|388411515|gb|EIL71684.1| dihydropyrimidine dehydrogenase [Escherichia coli HM605]
gi|430877147|gb|ELC00603.1| dihydroorotate dehydrogenase [Escherichia coli KTE4]
gi|430886445|gb|ELC09300.1| dihydroorotate dehydrogenase [Escherichia coli KTE5]
gi|430906348|gb|ELC27948.1| dihydroorotate dehydrogenase [Escherichia coli KTE16]
gi|430907363|gb|ELC28861.1| dihydroorotate dehydrogenase [Escherichia coli KTE15]
gi|430934768|gb|ELC55115.1| dihydroorotate dehydrogenase [Escherichia coli KTE39]
gi|430952861|gb|ELC71775.1| dihydroorotate dehydrogenase [Escherichia coli KTE187]
gi|430962205|gb|ELC80062.1| dihydroorotate dehydrogenase [Escherichia coli KTE188]
gi|430981989|gb|ELC98708.1| dihydroorotate dehydrogenase [Escherichia coli KTE201]
gi|430993825|gb|ELD10169.1| dihydroorotate dehydrogenase [Escherichia coli KTE205]
gi|430997903|gb|ELD14152.1| dihydroorotate dehydrogenase [Escherichia coli KTE206]
gi|431023513|gb|ELD36708.1| dihydroorotate dehydrogenase [Escherichia coli KTE214]
gi|431038071|gb|ELD49040.1| dihydroorotate dehydrogenase [Escherichia coli KTE220]
gi|431041846|gb|ELD52341.1| dihydroorotate dehydrogenase [Escherichia coli KTE224]
gi|431051462|gb|ELD61125.1| dihydroorotate dehydrogenase [Escherichia coli KTE230]
gi|431099942|gb|ELE04958.1| dihydroorotate dehydrogenase [Escherichia coli KTE53]
gi|431107826|gb|ELE11990.1| dihydroorotate dehydrogenase [Escherichia coli KTE55]
gi|431115763|gb|ELE19257.1| dihydroorotate dehydrogenase [Escherichia coli KTE57]
gi|431120809|gb|ELE23807.1| dihydroorotate dehydrogenase [Escherichia coli KTE58]
gi|431127513|gb|ELE29813.1| dihydroorotate dehydrogenase [Escherichia coli KTE60]
gi|431131002|gb|ELE33085.1| dihydroorotate dehydrogenase [Escherichia coli KTE62]
gi|431137921|gb|ELE39761.1| dihydroorotate dehydrogenase [Escherichia coli KTE67]
gi|431148131|gb|ELE49422.1| dihydroorotate dehydrogenase [Escherichia coli KTE72]
gi|431180756|gb|ELE80643.1| dihydroorotate dehydrogenase [Escherichia coli KTE86]
gi|431190150|gb|ELE89550.1| dihydroorotate dehydrogenase [Escherichia coli KTE87]
gi|431190772|gb|ELE90158.1| dihydroorotate dehydrogenase [Escherichia coli KTE93]
gi|431243328|gb|ELF37715.1| dihydroorotate dehydrogenase [Escherichia coli KTE169]
gi|431256703|gb|ELF49638.1| dihydroorotate dehydrogenase [Escherichia coli KTE8]
gi|431291229|gb|ELF81742.1| dihydroorotate dehydrogenase [Escherichia coli KTE43]
gi|431302172|gb|ELF91360.1| dihydroorotate dehydrogenase [Escherichia coli KTE22]
gi|431327241|gb|ELG14586.1| dihydroorotate dehydrogenase [Escherichia coli KTE59]
gi|431328519|gb|ELG15823.1| dihydroorotate dehydrogenase [Escherichia coli KTE63]
gi|431337752|gb|ELG24840.1| dihydroorotate dehydrogenase [Escherichia coli KTE65]
gi|431348154|gb|ELG35012.1| dihydroorotate dehydrogenase [Escherichia coli KTE84]
gi|431368331|gb|ELG54799.1| dihydroorotate dehydrogenase [Escherichia coli KTE118]
gi|431372865|gb|ELG58527.1| dihydroorotate dehydrogenase [Escherichia coli KTE123]
gi|431394540|gb|ELG78073.1| dihydroorotate dehydrogenase [Escherichia coli KTE141]
gi|431426819|gb|ELH08863.1| dihydroorotate dehydrogenase [Escherichia coli KTE192]
gi|431432642|gb|ELH14319.1| dihydroorotate dehydrogenase [Escherichia coli KTE194]
gi|431463234|gb|ELH43427.1| dihydroorotate dehydrogenase [Escherichia coli KTE183]
gi|431481853|gb|ELH61560.1| dihydroorotate dehydrogenase [Escherichia coli KTE207]
gi|431489157|gb|ELH68785.1| dihydroorotate dehydrogenase [Escherichia coli KTE209]
gi|431500144|gb|ELH79160.1| dihydroorotate dehydrogenase [Escherichia coli KTE215]
gi|431505444|gb|ELH84050.1| dihydroorotate dehydrogenase [Escherichia coli KTE218]
gi|431508439|gb|ELH86711.1| dihydroorotate dehydrogenase [Escherichia coli KTE223]
gi|431514593|gb|ELH92434.1| dihydroorotate dehydrogenase [Escherichia coli KTE227]
gi|431523519|gb|ELI00656.1| dihydroorotate dehydrogenase [Escherichia coli KTE229]
gi|431542864|gb|ELI17860.1| dihydroorotate dehydrogenase [Escherichia coli KTE109]
gi|431551248|gb|ELI25234.1| dihydroorotate dehydrogenase [Escherichia coli KTE113]
gi|431568922|gb|ELI41884.1| dihydroorotate dehydrogenase [Escherichia coli KTE124]
gi|431588051|gb|ELI59399.1| dihydroorotate dehydrogenase [Escherichia coli KTE129]
gi|431596554|gb|ELI66506.1| dihydroorotate dehydrogenase [Escherichia coli KTE131]
gi|431601998|gb|ELI71507.1| dihydroorotate dehydrogenase [Escherichia coli KTE133]
gi|431604339|gb|ELI73748.1| dihydroorotate dehydrogenase [Escherichia coli KTE137]
gi|431619288|gb|ELI88212.1| dihydroorotate dehydrogenase [Escherichia coli KTE145]
gi|431633844|gb|ELJ02106.1| dihydroorotate dehydrogenase [Escherichia coli KTE153]
gi|431642347|gb|ELJ10070.1| dihydroorotate dehydrogenase [Escherichia coli KTE157]
gi|431644966|gb|ELJ12619.1| dihydroorotate dehydrogenase [Escherichia coli KTE160]
gi|431660114|gb|ELJ27002.1| dihydroorotate dehydrogenase [Escherichia coli KTE167]
gi|431661433|gb|ELJ28246.1| dihydroorotate dehydrogenase [Escherichia coli KTE168]
gi|431670387|gb|ELJ36740.1| dihydroorotate dehydrogenase [Escherichia coli KTE174]
gi|431674158|gb|ELJ40341.1| dihydroorotate dehydrogenase [Escherichia coli KTE176]
gi|431687328|gb|ELJ52879.1| dihydroorotate dehydrogenase [Escherichia coli KTE179]
gi|431687980|gb|ELJ53521.1| dihydroorotate dehydrogenase [Escherichia coli KTE180]
gi|431705637|gb|ELJ70227.1| dihydroorotate dehydrogenase [Escherichia coli KTE88]
gi|431706374|gb|ELJ70945.1| dihydroorotate dehydrogenase [Escherichia coli KTE85]
gi|431729608|gb|ELJ93227.1| dihydroorotate dehydrogenase [Escherichia coli KTE97]
gi|431734084|gb|ELJ97485.1| dihydroorotate dehydrogenase [Escherichia coli KTE99]
gi|441710503|emb|CCQ08635.1| Dihydropyrimidine dehydrogenase [NADP+] [Escherichia coli Nissle
1917]
Length = 411
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|422830166|ref|ZP_16878327.1| hypothetical protein ESNG_02832 [Escherichia coli B093]
gi|371606856|gb|EHN95446.1| hypothetical protein ESNG_02832 [Escherichia coli B093]
Length = 411
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEDNLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|422834062|ref|ZP_16882126.1| hypothetical protein ESOG_01727 [Escherichia coli E101]
gi|371603489|gb|EHN92144.1| hypothetical protein ESOG_01727 [Escherichia coli E101]
Length = 411
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|319782785|ref|YP_004142261.1| dihydroorotate dehydrogenase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168673|gb|ADV12211.1| dihydroorotate dehydrogenase family protein [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 437
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/358 (40%), Positives = 208/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+ G++ PNPF + S PP + RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DIRNNFVGIKSPNPFWLASAPPTDKAYNVIRAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L+ L+E KQ+K +PD+ ++ S+M + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLQVNLREIKQVKKDWPDRAIVVSLMVPCVEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEET D IE+NF CPHGM ER MGAAVGQ +E V W +PV K
Sbjct: 118 WKAILPVVEETEADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVRWCKQNTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PAR A G++ VS INTI S+ G+DL + P+P ++G + GGY AV
Sbjct: 178 LTPNITDVRKPARAAHAGGTDAVSLINTINSITGVDLDSFAPQPTIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V IA+ +++ +SGIGG+ T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIAMNMVAEIARDPETQ----GLPISGIGGITTWRDAAEFMALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L+++M +S++D G + T + L + + I Q ++ G
Sbjct: 294 KIVQEMIAGLENWMDEKGHASLDDIVGRATPNVTDWQYLNLNYVAKAHIDQDACIKCG 351
>gi|433462002|ref|ZP_20419598.1| dihydropyrimidine dehydrogenase subunit B [Halobacillus sp.
BAB-2008]
gi|432189446|gb|ELK46553.1| dihydropyrimidine dehydrogenase subunit B [Halobacillus sp.
BAB-2008]
Length = 428
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/333 (42%), Positives = 199/333 (59%), Gaps = 13/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL + + G++ PNPF + S PP + ++RAF+ GWG V KT+ ++NV+ R+A
Sbjct: 3 DLRLDLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GEPILNVSSRFA 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ NG ++ G+ NIELI+DRPLE LKE + K YPD +IAS+M E + W
Sbjct: 60 AVNF--NGK---KVAGFNNIELITDRPLEVNLKEIYETKKKYPDHAIIASLMVEPTQEKW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ RVE+ G+D +E+NF CPHGM ER MGAA GQ L+E+ W A PV K+
Sbjct: 115 HEIVKRVEDVGVDGLELNFGCPHGMAERGMGAASGQVPELVEKQTMWAKEVAQTPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDIT A+ A+ G++ VS INTI S+ G+D+ T P V G GGY AV
Sbjct: 175 TPNITDITFTAQAAVNGGADAVSMINTINSLAGVDIDTWDTIPNVAGKGAHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V A+ K + +SG+GGV + +A EF+L+GA VQVCT M HG+
Sbjct: 235 PIALNMVAECARHPKI-----NVPISGMGGVSSWREAVEFMLMGATGVQVCTAAMHHGFS 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +++ N S+ D G S+ ++
Sbjct: 290 IVEDMIDGLNNYLDEKNIDSVMDLVGKSVGKYS 322
>gi|170682869|ref|YP_001744341.1| dihydropyrimidine dehydrogenase [Escherichia coli SMS-3-5]
gi|170520587|gb|ACB18765.1| dihydroorotate dehydrogenase family protein [Escherichia coli
SMS-3-5]
Length = 411
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLTDQGFDSLQEMVG 317
>gi|218700619|ref|YP_002408248.1| dihydropyrimidine dehydrogenase [Escherichia coli IAI39]
gi|300935069|ref|ZP_07150100.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 21-1]
gi|386624842|ref|YP_006144570.1| Dihydropyrimidine dehydrogenase, NADH-dependent, subunit B
[Escherichia coli O7:K1 str. CE10]
gi|432617215|ref|ZP_19853330.1| dihydroorotate dehydrogenase [Escherichia coli KTE75]
gi|432680756|ref|ZP_19916130.1| dihydroorotate dehydrogenase [Escherichia coli KTE143]
gi|218370605|emb|CAR18412.1| putative oxidoreductase subunit [Escherichia coli IAI39]
gi|300459650|gb|EFK23143.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 21-1]
gi|349738579|gb|AEQ13285.1| Dihydropyrimidine dehydrogenase, NADH-dependent, subunit B
[Escherichia coli O7:K1 str. CE10]
gi|431154156|gb|ELE54978.1| dihydroorotate dehydrogenase [Escherichia coli KTE75]
gi|431220153|gb|ELF17533.1| dihydroorotate dehydrogenase [Escherichia coli KTE143]
Length = 411
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEDNLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|419002687|ref|ZP_13550214.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC1B]
gi|377847566|gb|EHU12564.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC1B]
Length = 411
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRAHPELHDFPISGIGGIETREDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|398890313|ref|ZP_10643950.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM55]
gi|398188277|gb|EJM75585.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM55]
Length = 424
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/329 (44%), Positives = 204/329 (62%), Gaps = 10/329 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G+ NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVLGFNNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KNILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ ++L+ + P V G ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVANPMVGGQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ +SGIGG+ DAAEFI LG+ +VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPISGIGGIGNWRDAAEFIALGSGSVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+V+ + + L +M ++SI +F G ++
Sbjct: 293 IVEEMKDGLSRWMDSQGYTSISEFSGRAV 321
>gi|432441644|ref|ZP_19683984.1| dihydroorotate dehydrogenase [Escherichia coli KTE189]
gi|432446758|ref|ZP_19689057.1| dihydroorotate dehydrogenase [Escherichia coli KTE191]
gi|433014413|ref|ZP_20202761.1| dihydroorotate dehydrogenase [Escherichia coli KTE104]
gi|433024031|ref|ZP_20212019.1| dihydroorotate dehydrogenase [Escherichia coli KTE106]
gi|433323624|ref|ZP_20400955.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli J96]
gi|430966098|gb|ELC83506.1| dihydroorotate dehydrogenase [Escherichia coli KTE189]
gi|430973031|gb|ELC89999.1| dihydroorotate dehydrogenase [Escherichia coli KTE191]
gi|431530511|gb|ELI07190.1| dihydroorotate dehydrogenase [Escherichia coli KTE104]
gi|431535724|gb|ELI12063.1| dihydroorotate dehydrogenase [Escherichia coli KTE106]
gi|432347722|gb|ELL42179.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli J96]
Length = 411
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSISNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|307311274|ref|ZP_07590918.1| dihydroorotate dehydrogenase family protein [Escherichia coli W]
gi|378712402|ref|YP_005277295.1| dihydroorotate dehydrogenase family protein [Escherichia coli
KO11FL]
gi|386609539|ref|YP_006125025.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit B
[Escherichia coli W]
gi|386700867|ref|YP_006164704.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli KO11FL]
gi|386710021|ref|YP_006173742.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli W]
gi|306908780|gb|EFN39277.1| dihydroorotate dehydrogenase family protein [Escherichia coli W]
gi|315061456|gb|ADT75783.1| dihydropyrimidine dehydrogenase, NADH-dependent, subunit B
[Escherichia coli W]
gi|323377963|gb|ADX50231.1| dihydroorotate dehydrogenase family protein [Escherichia coli
KO11FL]
gi|383392394|gb|AFH17352.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli KO11FL]
gi|383405713|gb|AFH11956.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli W]
Length = 411
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT ++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCSVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L +QLK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRQLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|417629391|ref|ZP_12279629.1| hypothetical protein ECSTECMHI813_2313 [Escherichia coli
STEC_MHI813]
gi|345373359|gb|EGX05320.1| hypothetical protein ECSTECMHI813_2313 [Escherichia coli
STEC_MHI813]
Length = 411
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G+ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVNFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|427805260|ref|ZP_18972327.1| putative oxidoreductase [Escherichia coli chi7122]
gi|427809819|ref|ZP_18976884.1| putative oxidoreductase [Escherichia coli]
gi|412963442|emb|CCK47367.1| putative oxidoreductase [Escherichia coli chi7122]
gi|412969998|emb|CCJ44641.1| putative oxidoreductase [Escherichia coli]
Length = 413
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 7 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 64
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L +QLK YPDK+LIAS M E N+ W
Sbjct: 65 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRQLKEDYPDKVLIASSMGE-NEQQW 118
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 119 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 177
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 178 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 237
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 238 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 293
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 294 IVEDMASGLSHYLADQGFDSLQEMVG 319
>gi|443618203|ref|YP_007382059.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli APEC
O78]
gi|443422711|gb|AGC87615.1| dihydropyrimidine dehydrogenase subunit B [Escherichia coli APEC
O78]
Length = 411
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L +QLK YPDK+LIAS M E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRQLKEDYPDKVLIASSMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|410454621|ref|ZP_11308545.1| dihydropyrimidine dehydrogenase subunit B [Bacillus bataviensis LMG
21833]
gi|409930551|gb|EKN67547.1| dihydropyrimidine dehydrogenase subunit B [Bacillus bataviensis LMG
21833]
Length = 428
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/334 (41%), Positives = 196/334 (58%), Gaps = 15/334 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL I + G++ PNPF + S PP + ++RAF+ GWG V KT+ ++NV+ R+A
Sbjct: 3 DLRINLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GDPILNVSSRFA 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ + G+ NIELI+DRPLE LKE + K +P+ +IAS+M E +
Sbjct: 60 AI------SFNGQRVAGFNNIELITDRPLEVNLKEIYETKKRFPNHAIIASLMVEPKQEK 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ +VE+ G+D +E+NF CPHGM ER MGAA GQ L+E W+ A PV K
Sbjct: 114 WHEIVKQVEDVGVDGLELNFGCPHGMAERGMGAASGQVPALVERQTYWVKEVAKTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT A A G++ +S INTI S+MG+DL + P V G GGY AV
Sbjct: 174 LTPNITDITATAEAACNGGADAISMINTINSLMGVDLDSWNTIPHVAGKGAHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V A+ + +SGIGG+ DA EF+L+GA VQVCT M HG+
Sbjct: 234 KPIALNMVAECAR-----HPHINVPISGIGGISNWQDAVEFMLMGATGVQVCTAAMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + E L +++ SSI + G S+ ++
Sbjct: 289 RIVEDMIEGLSNYLDSKGISSISEIIGKSVPRYS 322
>gi|222156903|ref|YP_002557042.1| hypothetical protein LF82_3007 [Escherichia coli LF82]
gi|387617507|ref|YP_006120529.1| dihydropyrimidine dehydrogenase [Escherichia coli O83:H1 str. NRG
857C]
gi|419040294|ref|ZP_13587322.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC2E]
gi|419914403|ref|ZP_14432801.1| dihydropyrimidine dehydrogenase [Escherichia coli KD1]
gi|422382277|ref|ZP_16462438.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 57-2]
gi|432554237|ref|ZP_19790960.1| dihydroorotate dehydrogenase [Escherichia coli KTE47]
gi|432732882|ref|ZP_19967715.1| dihydroorotate dehydrogenase [Escherichia coli KTE45]
gi|432759968|ref|ZP_19994462.1| dihydroorotate dehydrogenase [Escherichia coli KTE46]
gi|222033908|emb|CAP76649.1| Uncharacterized protein yeiA [Escherichia coli LF82]
gi|312946768|gb|ADR27595.1| dihydropyrimidine dehydrogenase [Escherichia coli O83:H1 str. NRG
857C]
gi|324006546|gb|EGB75765.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 57-2]
gi|377890334|gb|EHU54791.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC2E]
gi|388386674|gb|EIL48314.1| dihydropyrimidine dehydrogenase [Escherichia coli KD1]
gi|431084042|gb|ELD90213.1| dihydroorotate dehydrogenase [Escherichia coli KTE47]
gi|431276069|gb|ELF67096.1| dihydroorotate dehydrogenase [Escherichia coli KTE45]
gi|431307622|gb|ELF95912.1| dihydroorotate dehydrogenase [Escherichia coli KTE46]
Length = 411
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELHDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|407973728|ref|ZP_11154639.1| dihydropyrimidine dehydrogenase subunit B [Nitratireductor indicus
C115]
gi|407430788|gb|EKF43461.1| dihydropyrimidine dehydrogenase subunit B [Nitratireductor indicus
C115]
Length = 437
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 205/358 (57%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+ G++ PNPF + S PP ++RAF GWG VV KT+ V+NV PRY
Sbjct: 3 DIRSNFVGIKSPNPFWLASAPPTDKAYNVERAFRAGWGGVVWKTLGEAGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L L E K++K +PD+ L+ S+M + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYLNLTEIKRVKRNWPDRALVVSLMVPCEENA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEET D IE+NF CPHGM ER MGAAVGQ +E V W +PV K
Sbjct: 118 WKAILPLVEETEADGIELNFGCPHGMSERGMGAAVGQVPEYVEMVVRWCKQNTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PAR A G++ VS INTI S+ +DL PEP ++G T GGY AV
Sbjct: 178 LTPNITDVRKPARAAHAGGTDAVSLINTINSITSVDLDDFAPEPTIDGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGG+ T DAAEF++LG+ TVQVCT M +G+
Sbjct: 238 KPIALNMVAEIAR----DPAMAGLPISGIGGITTWRDAAEFLVLGSGTVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + E LK++M ++++D G + T + L + + I Q ++ G
Sbjct: 294 KIVEEMAEGLKNWMDAKGHATLDDVIGRATPNVTDWQYLNLNYITKARIDQDLCIKCG 351
>gi|398902416|ref|ZP_10651007.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM50]
gi|398178544|gb|EJM66190.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM50]
Length = 424
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 205/329 (62%), Gaps = 10/329 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G+ NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVVGFNNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
++++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KQILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ ++L+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVANPAVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ +SGIGG+ + DAAEFI LG+ +VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPISGIGGIGSWRDAAEFIALGSGSVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+V+ + + L +M ++S+ +F G ++
Sbjct: 293 IVEEMKDGLSRWMDSQGYASVSEFSGRAV 321
>gi|419192177|ref|ZP_13735631.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC7E]
gi|378038706|gb|EHW01215.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC7E]
Length = 411
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L +QLK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRQLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ V Q L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVRQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|300918787|ref|ZP_07135356.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 115-1]
gi|419922179|ref|ZP_14440201.1| dihydropyrimidine dehydrogenase [Escherichia coli 541-15]
gi|425305868|ref|ZP_18695579.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli N1]
gi|300414030|gb|EFJ97340.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 115-1]
gi|388396755|gb|EIL57829.1| dihydropyrimidine dehydrogenase [Escherichia coli 541-15]
gi|408228493|gb|EKI52027.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli N1]
Length = 411
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPVLVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|215487368|ref|YP_002329799.1| dihydropyrimidine dehydrogenase [Escherichia coli O127:H6 str.
E2348/69]
gi|312967440|ref|ZP_07781655.1| uncharacterized protein yeiA [Escherichia coli 2362-75]
gi|416335333|ref|ZP_11672026.1| dihydropyrimidine dehydrogenase [Escherichia coli WV_060327]
gi|417756400|ref|ZP_12404475.1| putative oxidoreductase [Escherichia coli DEC2B]
gi|418997418|ref|ZP_13545012.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC1A]
gi|419008382|ref|ZP_13555813.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC1C]
gi|419014063|ref|ZP_13561414.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC1D]
gi|419019066|ref|ZP_13566373.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC1E]
gi|419024566|ref|ZP_13571792.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC2A]
gi|419029607|ref|ZP_13576770.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC2C]
gi|419035216|ref|ZP_13582302.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC2D]
gi|215265440|emb|CAS09841.1| predicted oxidoreductase [Escherichia coli O127:H6 str. E2348/69]
gi|312287637|gb|EFR15542.1| uncharacterized protein yeiA [Escherichia coli 2362-75]
gi|320196016|gb|EFW70640.1| dihydropyrimidine dehydrogenase [Escherichia coli WV_060327]
gi|377843245|gb|EHU08285.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC1A]
gi|377843900|gb|EHU08937.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC1C]
gi|377857401|gb|EHU22252.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC1D]
gi|377860120|gb|EHU24946.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC1E]
gi|377863350|gb|EHU28155.1| dihydroorotate dehydrogenase family domain protein [Escherichia
coli DEC2A]
gi|377873816|gb|EHU38447.1| putative oxidoreductase [Escherichia coli DEC2B]
gi|377877789|gb|EHU42378.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC2C]
gi|377879572|gb|EHU44144.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC2D]
Length = 411
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRAHPELHDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|424816940|ref|ZP_18242091.1| dihydropyrimidine dehydrogenase [Escherichia fergusonii ECD227]
gi|325497960|gb|EGC95819.1| dihydropyrimidine dehydrogenase [Escherichia fergusonii ECD227]
Length = 411
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+L V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EDLARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|375006680|ref|YP_004975464.1| putative dihydroorotate dehydrogenase [Azospirillum lipoferum 4B]
gi|357427938|emb|CBS90887.1| putative dihydroorotate dehydrogenase [Azospirillum lipoferum 4B]
Length = 428
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 201/339 (59%), Gaps = 11/339 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G++ PNPF + S PP T + RAF GWG VV KT+ D V+NV+ RY
Sbjct: 3 DLRSTIAGIRSPNPFWLASAPPTDKLTNVVRAFKAGWGGVVWKTLGEDP-PVVNVSSRY- 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
GA+ ++IG NIELISDRPL+ L+E Q+K +PD+ ++ S+M + AW
Sbjct: 61 ----GAHLDTDRRMIGLNNIELISDRPLDVNLQEIIQVKRDWPDRAMVVSLMATMTETAW 116
Query: 166 EELIDRVEETGI-DAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
L R+ ETG D +E+N CPHGM ER MG+A+GQ ++E+V W+ +PV K
Sbjct: 117 AGLARRIAETGAADGLELNLGCPHGMCERGMGSAIGQVPEMVEQVTRWVKNAVNLPVIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNIT+I A A R G++ VS INT+ S++ +DL + P P V+G + GGY AV
Sbjct: 177 LTPNITNILWSAEAARRGGADAVSLINTVNSIVAVDLDAMAPTPVVDGKGSHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ + +SGIGGV T DAAEF+ LGA VQVCT M +G+
Sbjct: 237 KPIALNMVAEIARNPET----RGLPVSGIGGVTTWRDAAEFLALGATNVQVCTAAMTYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + L ++M + ++++ G ++ +L
Sbjct: 293 KIVEDMIGGLSNWMDEKGYRTLDELSGRAVRNVVNWNDL 331
>gi|406666658|ref|ZP_11074423.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Bacillus isronensis B3W22]
gi|405385428|gb|EKB44862.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Bacillus isronensis B3W22]
Length = 427
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 201/339 (59%), Gaps = 15/339 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL I G++ PNPF + S PP + ++RAF+ GWG V KT+ ++NV+ R+A
Sbjct: 3 DLRIDFAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GDPILNVSSRFA 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ + G+ NIELI+DRPLE LKE + K +P+ +IAS+M E
Sbjct: 60 AV------SFNGQKVAGFNNIELITDRPLEVNLKEIYETKKRFPNHTIIASLMVEPKAEK 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ RV++ G+D E+NF CPHGM ER MGAA GQ L+E+ W A VPV K
Sbjct: 114 WHEIVKRVQDVGVDGFELNFGCPHGMAERGMGAASGQVPELVEKQTYWAKEYAEVPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT A A+R G++ +S INTI S+ G+DL + P V GGY AV
Sbjct: 174 LTPNITDITVTAEAAVRGGADAISMINTINSLAGVDLNSWNTIPHVGNKGAHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V A +S + + +SGIGG+ DAAEFIL+G+ +VQVCT M HG+
Sbjct: 234 KPIALNMVGECA---RSPY--INLPISGIGGISNWQDAAEFILMGSTSVQVCTAAMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
G+V+ + + L +++ +S+ D G ++ ++ +L
Sbjct: 289 GIVEDMIDGLNNYLDDKGLASVTDLVGKTVPKYSDWGDL 327
>gi|366160596|ref|ZP_09460458.1| dihydropyrimidine dehydrogenase subunit B [Escherichia sp. TW09308]
gi|432372824|ref|ZP_19615865.1| dihydroorotate dehydrogenase [Escherichia coli KTE11]
gi|430895963|gb|ELC18214.1| dihydroorotate dehydrogenase [Escherichia coli KTE11]
Length = 411
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLTALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+L V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EDLARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|432543755|ref|ZP_19780598.1| dihydroorotate dehydrogenase [Escherichia coli KTE236]
gi|432549245|ref|ZP_19786013.1| dihydroorotate dehydrogenase [Escherichia coli KTE237]
gi|432622398|ref|ZP_19858429.1| dihydroorotate dehydrogenase [Escherichia coli KTE76]
gi|432815886|ref|ZP_20049670.1| dihydroorotate dehydrogenase [Escherichia coli KTE115]
gi|431074165|gb|ELD81729.1| dihydroorotate dehydrogenase [Escherichia coli KTE236]
gi|431079523|gb|ELD86477.1| dihydroorotate dehydrogenase [Escherichia coli KTE237]
gi|431159198|gb|ELE59755.1| dihydroorotate dehydrogenase [Escherichia coli KTE76]
gi|431364110|gb|ELG50654.1| dihydroorotate dehydrogenase [Escherichia coli KTE115]
Length = 411
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEDNLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + I ++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQI----RTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|301021088|ref|ZP_07185129.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 69-1]
gi|331673675|ref|ZP_08374438.1| putative oxidoreductase [Escherichia coli TA280]
gi|419920695|ref|ZP_14438806.1| dihydropyrimidine dehydrogenase [Escherichia coli KD2]
gi|300398269|gb|EFJ81807.1| dihydropyrimidine dehydrogenase [Escherichia coli MS 69-1]
gi|331068948|gb|EGI40340.1| putative oxidoreductase [Escherichia coli TA280]
gi|388384322|gb|EIL46056.1| dihydropyrimidine dehydrogenase [Escherichia coli KD2]
Length = 411
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+L V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EDLARMVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|331647798|ref|ZP_08348890.1| putative oxidoreductase [Escherichia coli M605]
gi|386619764|ref|YP_006139344.1| Dihydropyrimidine dehydrogenase like protein [Escherichia coli
NA114]
gi|387830082|ref|YP_003350019.1| putative dihydropyrimidine dehydrogenase [Escherichia coli SE15]
gi|417662762|ref|ZP_12312343.1| hypothetical protein ECAA86_02352 [Escherichia coli AA86]
gi|432397976|ref|ZP_19640757.1| dihydroorotate dehydrogenase [Escherichia coli KTE25]
gi|432407204|ref|ZP_19649913.1| dihydroorotate dehydrogenase [Escherichia coli KTE28]
gi|432422495|ref|ZP_19665040.1| dihydroorotate dehydrogenase [Escherichia coli KTE178]
gi|432500635|ref|ZP_19742392.1| dihydroorotate dehydrogenase [Escherichia coli KTE216]
gi|432559398|ref|ZP_19796067.1| dihydroorotate dehydrogenase [Escherichia coli KTE49]
gi|432695010|ref|ZP_19930209.1| dihydroorotate dehydrogenase [Escherichia coli KTE162]
gi|432711199|ref|ZP_19946259.1| dihydroorotate dehydrogenase [Escherichia coli KTE6]
gi|432723600|ref|ZP_19958520.1| dihydroorotate dehydrogenase [Escherichia coli KTE17]
gi|432728187|ref|ZP_19963066.1| dihydroorotate dehydrogenase [Escherichia coli KTE18]
gi|432741881|ref|ZP_19976600.1| dihydroorotate dehydrogenase [Escherichia coli KTE23]
gi|432919612|ref|ZP_20123726.1| dihydroorotate dehydrogenase [Escherichia coli KTE173]
gi|432927514|ref|ZP_20128943.1| dihydroorotate dehydrogenase [Escherichia coli KTE175]
gi|432981577|ref|ZP_20170352.1| dihydroorotate dehydrogenase [Escherichia coli KTE211]
gi|432991188|ref|ZP_20179852.1| dihydroorotate dehydrogenase [Escherichia coli KTE217]
gi|433097019|ref|ZP_20283203.1| dihydroorotate dehydrogenase [Escherichia coli KTE139]
gi|433106441|ref|ZP_20292416.1| dihydroorotate dehydrogenase [Escherichia coli KTE148]
gi|433111399|ref|ZP_20297264.1| dihydroorotate dehydrogenase [Escherichia coli KTE150]
gi|281179239|dbj|BAI55569.1| putative dihydropyrimidine dehydrogenase [Escherichia coli SE15]
gi|330911980|gb|EGH40490.1| hypothetical protein ECAA86_02352 [Escherichia coli AA86]
gi|331043522|gb|EGI15660.1| putative oxidoreductase [Escherichia coli M605]
gi|333970265|gb|AEG37070.1| Dihydropyrimidine dehydrogenase like protein [Escherichia coli
NA114]
gi|430916080|gb|ELC37158.1| dihydroorotate dehydrogenase [Escherichia coli KTE25]
gi|430929963|gb|ELC50472.1| dihydroorotate dehydrogenase [Escherichia coli KTE28]
gi|430944107|gb|ELC64206.1| dihydroorotate dehydrogenase [Escherichia coli KTE178]
gi|431028212|gb|ELD41256.1| dihydroorotate dehydrogenase [Escherichia coli KTE216]
gi|431090618|gb|ELD96369.1| dihydroorotate dehydrogenase [Escherichia coli KTE49]
gi|431233592|gb|ELF29179.1| dihydroorotate dehydrogenase [Escherichia coli KTE162]
gi|431248879|gb|ELF43054.1| dihydroorotate dehydrogenase [Escherichia coli KTE6]
gi|431266154|gb|ELF57716.1| dihydroorotate dehydrogenase [Escherichia coli KTE17]
gi|431273876|gb|ELF64950.1| dihydroorotate dehydrogenase [Escherichia coli KTE18]
gi|431283572|gb|ELF74431.1| dihydroorotate dehydrogenase [Escherichia coli KTE23]
gi|431443656|gb|ELH24682.1| dihydroorotate dehydrogenase [Escherichia coli KTE173]
gi|431444037|gb|ELH25061.1| dihydroorotate dehydrogenase [Escherichia coli KTE175]
gi|431490886|gb|ELH70493.1| dihydroorotate dehydrogenase [Escherichia coli KTE211]
gi|431495270|gb|ELH74856.1| dihydroorotate dehydrogenase [Escherichia coli KTE217]
gi|431615367|gb|ELI84496.1| dihydroorotate dehydrogenase [Escherichia coli KTE139]
gi|431627148|gb|ELI95559.1| dihydroorotate dehydrogenase [Escherichia coli KTE148]
gi|431628703|gb|ELI97079.1| dihydroorotate dehydrogenase [Escherichia coli KTE150]
Length = 411
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLG+ T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGSATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|422334394|ref|ZP_16415401.1| dihydroorotate dehydrogenase [Escherichia coli 4_1_47FAA]
gi|432771110|ref|ZP_20005449.1| dihydroorotate dehydrogenase [Escherichia coli KTE50]
gi|373244620|gb|EHP64101.1| dihydroorotate dehydrogenase [Escherichia coli 4_1_47FAA]
gi|431314807|gb|ELG02739.1| dihydroorotate dehydrogenase [Escherichia coli KTE50]
Length = 411
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEDNLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+L V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EDLARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|218549560|ref|YP_002383351.1| dihydropyrimidine dehydrogenase [Escherichia fergusonii ATCC 35469]
gi|218357101|emb|CAQ89734.1| putative oxidoreductase subunit [Escherichia fergusonii ATCC 35469]
Length = 411
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+L V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EDLARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|422780941|ref|ZP_16833726.1| dihydroorotate dehydrogenase [Escherichia coli TW10509]
gi|323977659|gb|EGB72745.1| dihydroorotate dehydrogenase [Escherichia coli TW10509]
Length = 411
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+L V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EDLARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|432962316|ref|ZP_20151969.1| dihydroorotate dehydrogenase [Escherichia coli KTE202]
gi|433063610|ref|ZP_20250533.1| dihydroorotate dehydrogenase [Escherichia coli KTE125]
gi|431474107|gb|ELH53929.1| dihydroorotate dehydrogenase [Escherichia coli KTE202]
gi|431581604|gb|ELI54051.1| dihydroorotate dehydrogenase [Escherichia coli KTE125]
Length = 411
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEDNLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+L V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EDLARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMVSGLSHYLADQGFDSLQEMVG 317
>gi|398881814|ref|ZP_10636788.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM60]
gi|398200027|gb|EJM86955.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM60]
Length = 424
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 150/352 (42%), Positives = 214/352 (60%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKSPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G+ NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVLGFNNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ ++L+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVANPIVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ K +SGIGG+ DAAEFI LG+ +VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQT----KGLPISGIGGIGNWRDAAEFIALGSGSVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M ++S+ +F G ++ +Y + +++ ++ QEA
Sbjct: 293 IVEDMKDGLSRWMDSQGYASVSEFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|218690296|ref|YP_002398508.1| dihydropyrimidine dehydrogenase [Escherichia coli ED1a]
gi|218427860|emb|CAR08626.1| putative oxidoreductase subunit [Escherichia coli ED1a]
Length = 411
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET D AEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDTAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|432602708|ref|ZP_19838952.1| dihydroorotate dehydrogenase [Escherichia coli KTE66]
gi|431141282|gb|ELE43047.1| dihydroorotate dehydrogenase [Escherichia coli KTE66]
Length = 411
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEDNLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +++ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRNFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|415840671|ref|ZP_11522099.1| hypothetical protein ECRN5871_3885 [Escherichia coli RN587/1]
gi|417280470|ref|ZP_12067770.1| dihydropyrimidine dehydrogenase [Escherichia coli 3003]
gi|425278440|ref|ZP_18669686.1| hypothetical protein ECARS42123_2538 [Escherichia coli ARS4.2123]
gi|323188128|gb|EFZ73423.1| hypothetical protein ECRN5871_3885 [Escherichia coli RN587/1]
gi|386244799|gb|EII86529.1| dihydropyrimidine dehydrogenase [Escherichia coli 3003]
gi|408201987|gb|EKI27121.1| hypothetical protein ECARS42123_2538 [Escherichia coli ARS4.2123]
Length = 411
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ P PF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPTPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|398997951|ref|ZP_10700750.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM21]
gi|398122260|gb|EJM11858.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM21]
Length = 424
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 215/352 (61%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G+ NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVVGFNNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ ++L+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVANPAVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ +SGIGG+ + DAAEFI LG+ +VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPISGIGGIGSWRDAAEFIALGSGSVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M ++S+ +F G ++ +Y + +++ ++ QEA
Sbjct: 293 IVEEMKDGLSRWMDSQGYASVSEFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|432869516|ref|ZP_20090109.1| dihydroorotate dehydrogenase [Escherichia coli KTE147]
gi|431410102|gb|ELG93264.1| dihydroorotate dehydrogenase [Escherichia coli KTE147]
Length = 411
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +++ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRNFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|433198783|ref|ZP_20382685.1| dihydroorotate dehydrogenase [Escherichia coli KTE94]
gi|431721487|gb|ELJ85481.1| dihydroorotate dehydrogenase [Escherichia coli KTE94]
Length = 411
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 196/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHTMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P + G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIINGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELHDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L + F S+++ G
Sbjct: 292 IVEDMASGLSHYFADQGFDSLQEMVG 317
>gi|417708182|ref|ZP_12357215.1| hypothetical protein SFVA6_3000 [Shigella flexneri VA-6]
gi|420332029|ref|ZP_14833685.1| dihydroorotate dehydrogenase family domain protein [Shigella
flexneri K-1770]
gi|333001282|gb|EGK20850.1| hypothetical protein SFVA6_3000 [Shigella flexneri VA-6]
gi|391250924|gb|EIQ10143.1| dihydroorotate dehydrogenase family domain protein [Shigella
flexneri K-1770]
Length = 411
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G+ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVNFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLTALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+++ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVKKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|410695355|ref|YP_003625977.1| Dihydropyrimidine dehydrogenase [Thiomonas sp. 3As]
gi|294341780|emb|CAZ90209.1| Dihydropyrimidine dehydrogenase [Thiomonas sp. 3As]
Length = 438
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 208/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL I G++ PNPF + S PP + RAF+ GWG VV KT+ V+NV PRY
Sbjct: 3 DLRIDFAGIRSPNPFWLASAPPTDKAVNVNRAFEAGWGGVVWKTLGEAGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA + +++G+ NIELI+DR LE L E Q+K +PD+ ++ S+M +AA
Sbjct: 63 -----GALLTPDRRLLGFNNIELITDRDLELNLSEITQVKRDWPDRAMVVSLMVPCEEAA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ RVE+TG D IE+NF CPHGM ER MGAAVGQ +E V W + +PV K
Sbjct: 118 WKAILPRVEDTGCDGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTAWCKRYSRLPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PAR A G++ VS INTI S++G+D TL P G + GGY AV
Sbjct: 178 LTPNITDVRQPARAARAGGADAVSLINTINSIIGVDPATLTMTPSTGGRGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ K+ +SGIGG+ DA +FI LGA +VQVCT M++G+
Sbjct: 238 KPIALNMVADIARDPKT----AGLPISGIGGIGNWRDALDFIALGAGSVQVCTAAMVYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L ++M FSS+ G ++ T + L + + I Q ++ G
Sbjct: 294 KIVQEMTDGLSNYMDEMGFSSVAQLTGKALPSVTDWKYLNLNHISKAVIDQALCIQCG 351
>gi|415813257|ref|ZP_11505066.1| hypothetical protein ECLT68_3438 [Escherichia coli LT-68]
gi|323171798|gb|EFZ57442.1| hypothetical protein ECLT68_3438 [Escherichia coli LT-68]
Length = 411
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL IT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLLITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|398865748|ref|ZP_10621260.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM78]
gi|398242491|gb|EJN28103.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM78]
Length = 424
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 150/352 (42%), Positives = 213/352 (60%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKSPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G+ NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVLGFNNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ ++L+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVANPIVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ +SGIGG+ DAAEFI LG+ +VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTH----GLPISGIGGIGNWRDAAEFIALGSGSVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M ++SI +F G ++ +Y + +++ ++ QEA
Sbjct: 293 IVEEMKDGLSRWMDSQGYTSIAEFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|386855847|ref|YP_006260024.1| Dihydroorotate dehydrogenase family protein [Deinococcus gobiensis
I-0]
gi|379999376|gb|AFD24566.1| Dihydroorotate dehydrogenase family protein [Deinococcus gobiensis
I-0]
Length = 459
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 142/343 (41%), Positives = 207/343 (60%), Gaps = 20/343 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ G++ PNPF + S PP + + RAF+ GWG V KT+ A V+N++ RY+
Sbjct: 3 DLSVNFAGIRAPNPFWLASAPPTNSGAQIHRAFEYGWGGAVWKTI---GAPVLNISNRYS 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G +++ N+ELISDRPLE L+E ++K ++PD+ +I S M + + AW
Sbjct: 60 GLSLGGQ-----RLLAINNVELISDRPLEVNLREIAEVKRMWPDRAVIVSAMVDADPKAW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+++ +E+TG D IE+N+ CP GM ER MGAAVGQ + E W+ + +PV K+
Sbjct: 115 RDIVMMIEDTGADGIELNYGCPQGMSERGMGAAVGQVPEMCELNTHWVTSVTRLPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT ITEPA AL G+ +S INTI S+M +DL TL+ P + G T GGY+ AV
Sbjct: 175 TPNITRITEPAHAALAGGANALSLINTINSIMKVDLDTLQITPSIGGRGTHGGYAGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGI-----GGVETGGDAAEFILLGANTVQVCTGVM 340
PIAL ++ D+D SG+ GG++T DAAEF+LLGA +VQVCT M
Sbjct: 235 PIAL-------NLLSELVTDEDVRRSGVPICGMGGIQTWRDAAEFLLLGATSVQVCTAAM 287
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+GY +V+ + + L ++M F+SI+D G ++ +T +L
Sbjct: 288 HYGYRIVEDMIDGLSNWMDDKGFASIDDVAGRAVPQVSTFGQL 330
>gi|398818126|ref|ZP_10576724.1| dihydroorotate dehydrogenase family protein [Brevibacillus sp.
BC25]
gi|398028572|gb|EJL22079.1| dihydroorotate dehydrogenase family protein [Brevibacillus sp.
BC25]
Length = 425
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 136/333 (40%), Positives = 192/333 (57%), Gaps = 13/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI + G+Q PNPF + S PP + ++RAF+ GWG V KT+ +INVT R+A
Sbjct: 3 DLSINLAGIQSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GEPIINVTSRFA 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G ++ G+ NIELI+D+PLE LKE + K +P LIAS+M E+ + AW
Sbjct: 60 GLNFGGQ-----RVFGFNNIELITDKPLEVNLKEMDETKRRFPKHTLIASLMVEHKQEAW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ +VE G+D +E+NF CPHGM ER MG+AVGQ L+ + W+ A PV K+
Sbjct: 115 HEIVKKVEAIGVDGLELNFGCPHGMAERGMGSAVGQHPDLIRQQVEWVKEVAQTPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A + G++ +S INTI S+MG+DL+ P P V+G GGY AV
Sbjct: 175 TPNITDIRFTARAASQGGADAISMINTINSLMGVDLEKWLPIPHVDGKGAHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V A+ K D EF+L+GA VQVCT M HG+
Sbjct: 235 PIALNMVAECARDPKVGIPISGIGGI-----SDWRDTVEFLLMGATGVQVCTAAMHHGFR 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +++ +S+ D G ++ ++
Sbjct: 290 IVEDMIDGLNNYLDQRGIASVMDIVGKAVHTYS 322
>gi|260221587|emb|CBA30301.1| Uncharacterized protein yeiA [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 435
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 146/358 (40%), Positives = 208/358 (58%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
+L T G++ PNPF + S PP + RAF+ GWG VV KT+ V+NV PRY
Sbjct: 3 NLETTFAGVKSPNPFWLASAPPTDKAYNVNRAFEAGWGGVVWKTLGEAGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA SA ++ G+ NIELI+DR LE L+E ++K + D+ +I S+M + +
Sbjct: 63 -----GALLSADRRLNGFNNIELITDRDLELNLREITEVKRNWQDRAMIVSLMVPCQEES 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ RVE+TG DAIE+NF CPHGM ER MGAAVGQ ++ V W + +PV K
Sbjct: 118 WKAILPRVEDTGADAIELNFGCPHGMSERGMGAAVGQVPEYIQMVTEWCKHYSKLPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PA+ A R G++ VS INTI S+MG+D TL P G + GGY AV
Sbjct: 178 LTPNITDIRKPAQAAKRGGADAVSLINTINSIMGVDPYTLTMSPSTGGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGG+ T DA +FI LG+ TVQVCT M++G+
Sbjct: 238 KPIALNMVAEIAR----DPETAGLPISGIGGIGTWRDALDFIALGSGTVQVCTAAMVYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTT--HTELVRMQQEAIQQRKAVRKG 400
+V+ + L ++M F S+ + G ++ + + L + + I Q ++ G
Sbjct: 294 KIVQEMESGLSNYMDEMGFKSVGEIVGKAVPTVSDWRYLNLNHVSKAVINQDNCIQCG 351
>gi|417688691|ref|ZP_12337932.1| hypothetical protein SB521682_0944 [Shigella boydii 5216-82]
gi|332093238|gb|EGI98298.1| hypothetical protein SB521682_0944 [Shigella boydii 5216-82]
Length = 411
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEADADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|398839870|ref|ZP_10597112.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM102]
gi|398111833|gb|EJM01709.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM102]
Length = 424
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 204/329 (62%), Gaps = 10/329 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G+ NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVLGFNNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KNILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKMYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ ++L+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVANPAVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ +SGIGG+ + DAAEFI LG+ +VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPISGIGGIGSWRDAAEFIALGSGSVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+V+ + + L +M ++S+ +F G ++
Sbjct: 293 IVEEMKDGLSRWMDSQGYASVSEFSGRAV 321
>gi|398875750|ref|ZP_10630913.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM67]
gi|398205962|gb|EJM92737.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM67]
Length = 424
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 214/352 (60%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKSPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G+ NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVLGFNNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ ++L+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVANPIVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ +SGIGG+ DAAEFI LG+ +VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPISGIGGIGNWRDAAEFIALGSGSVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M ++S+ +F G ++ +Y + +++ ++ QEA
Sbjct: 293 IVEDMKDGLSRWMDSQGYASVSEFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|387612724|ref|YP_006115840.1| putative oxidoreductase, 4Fe-4S binding subunit [Escherichia coli
ETEC H10407]
gi|309702460|emb|CBJ01786.1| putative oxidoreductase, 4Fe-4S binding subunit [Escherichia coli
ETEC H10407]
Length = 411
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GW VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWDGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAERGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|398858896|ref|ZP_10614580.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM79]
gi|398237997|gb|EJN23734.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM79]
Length = 424
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 215/352 (61%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G+ NIELI+DR L+ L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVLGFNNIELITDRSLDINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KNILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ ++L+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAYRGGADAVSLINTINSITSVNLERMVANPAVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ +SGIGG+ + DAAEFI LG+ +VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPISGIGGIGSWRDAAEFIALGSGSVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M ++S+ +F G ++ +Y + +++ ++ QEA
Sbjct: 293 IVEEMKDGLSRWMDSQGYASVSEFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|398950586|ref|ZP_10673751.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM33]
gi|398157728|gb|EJM46102.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM33]
Length = 424
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 150/352 (42%), Positives = 213/352 (60%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G+ NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVLGFNNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ ++L+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVANPMVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ +SGIGG+ DAAEFI LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPISGIGGIGNWRDAAEFIALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M ++SI +F G ++ +Y + +++ ++ QEA
Sbjct: 293 IVEDMKDGLSRWMDTQGYASIAEFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|399009907|ref|ZP_10712307.1| dihydroorotate dehydrogenase family protein, partial [Pseudomonas
sp. GM17]
gi|398109054|gb|EJL98994.1| dihydroorotate dehydrogenase family protein, partial [Pseudomonas
sp. GM17]
Length = 351
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 199/329 (60%), Gaps = 10/329 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KNILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRMAARAAHRGGADAVSLINTINSITSVDLERMVANPMVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + GIGG+ T DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTH----GLPICGIGGIGTWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+V+ + + L +M + S++DF G ++
Sbjct: 293 IVEEMKDGLSRWMDSQGYHSLQDFSGRAV 321
>gi|359791299|ref|ZP_09294163.1| dihydropyrimidine dehydrogenase subunit B [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359252815|gb|EHK56024.1| dihydropyrimidine dehydrogenase subunit B [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 437
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 204/358 (56%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
D+ G++ PNPF + S PP + RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DIRNNFVGIKSPNPFWLASAPPTDKAYNVIRAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L L+E KQ+K +PD+ +I S+M + +
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLFVNLREIKQVKKDWPDRAIIVSLMVPCVEES 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEET D IE+NF CPHGM ER MGAAVGQ +E V W A +PV K
Sbjct: 118 WKAILPLVEETEADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVVRWCKANTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PAR AL G++ VS INTI S+ +DL PEP ++G + GGY AV
Sbjct: 178 LTPNITDVRKPARAALAGGTDAVSLINTINSITAVDLDNFSPEPSIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ +SGIGG+ T DAAEF+ LGA VQVCT M +G+
Sbjct: 238 KPIALNMVAEIARDPETH----GLPISGIGGITTWRDAAEFMALGAGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + + L ++M + ++ G + T + L + + I Q ++ G
Sbjct: 294 KIVQEMIDGLNNWMDEKGHTDLDAIVGRATPNVTDWQYLNLNYVAKAQINQDLCIKCG 351
>gi|407362172|ref|ZP_11108704.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas mandelii
JR-1]
Length = 424
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 148/329 (44%), Positives = 205/329 (62%), Gaps = 10/329 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKSPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L GAN +++G+ NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 AL-FGANR----EVVGFNNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KFILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ ++L+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVANPAVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ +SGIGG+ + DAAEFI LG+ +VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPISGIGGIGSWRDAAEFIALGSGSVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+V+ + + L +M ++SI +F G ++
Sbjct: 293 IVEEMKDGLSRWMDSQGYASIPEFSGRAV 321
>gi|420373814|ref|ZP_14873877.1| dihydroorotate dehydrogenase family domain protein [Shigella
flexneri 1235-66]
gi|391316837|gb|EIQ74222.1| dihydroorotate dehydrogenase family domain protein [Shigella
flexneri 1235-66]
Length = 411
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 196/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDSGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHNMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +++ D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQLRTHSELHDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+E+ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLEEMVG 317
>gi|251798657|ref|YP_003013388.1| dihydropyrimidine dehydrogenase [Paenibacillus sp. JDR-2]
gi|247546283|gb|ACT03302.1| dihydroorotate dehydrogenase family protein [Paenibacillus sp.
JDR-2]
Length = 434
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 137/338 (40%), Positives = 195/338 (57%), Gaps = 13/338 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL I + G+ PNPF + S PP ++RAF+ GWG V KT+ +IN + R+A
Sbjct: 3 DLRINLAGISSPNPFWLASAPPTNTGYQVQRAFEAGWGGAVWKTL---GDPIINTSSRFA 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ NG ++ G+ NIELI+DRPLE LKE + K +P+ ++ S+M E + W
Sbjct: 60 AVHF--NGQ---RVAGFNNIELITDRPLEVNLKEIYETKKRFPNHAVVVSLMVEPKREKW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ +VE G+D +E+NF CPHGM ER MG+A GQ L+E W A PV K+
Sbjct: 115 HEIVKKVEAVGVDGLELNFGCPHGMAERGMGSASGQQPDLVEAQTMWAKEAAKTPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDIT A+ A+R G++ +S INTI S+ G+DL T P V G GGY AV
Sbjct: 175 TPNITDITATAKAAVRGGADAISLINTINSLAGVDLDTWNTIPHVGGKGAHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V A+ + + +SGIGGV DA EF+L+GA VQVCT M HG+
Sbjct: 235 PIALNMVAECARNAQV-----NVPISGIGGVSNWRDAVEFMLMGATGVQVCTAAMHHGFS 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + + L +++ SS+ + G S+ ++ +L
Sbjct: 290 IVEDMIDGLNNYLDDKGLSSVTELIGKSVSRYSDWGDL 327
>gi|421775773|ref|ZP_16212381.1| dihydropyrimidine dehydrogenase [Escherichia coli AD30]
gi|408459242|gb|EKJ83025.1| dihydropyrimidine dehydrogenase [Escherichia coli AD30]
Length = 411
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ LE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHALEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|229591377|ref|YP_002873496.1| dihydropyrimidine dehydrogenase [Pseudomonas fluorescens SBW25]
gi|229363243|emb|CAY50336.1| putative dihydropyrimidine dehydrogenase [Pseudomonas fluorescens
SBW25]
Length = 424
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 211/352 (59%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ RVE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KNILPRVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAYRGGADAVSLINTINSITSVDLERMVALPMVGTQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ + GIGG+ DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPICGIGGIGNWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V + + L +M ++S+++F G ++ +Y + +++ ++ QEA
Sbjct: 293 IVDEMKDGLSRWMDSQGYTSLQEFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|373858791|ref|ZP_09601525.1| dihydroorotate dehydrogenase family protein [Bacillus sp. 1NLA3E]
gi|372451383|gb|EHP24860.1| dihydroorotate dehydrogenase family protein [Bacillus sp. 1NLA3E]
Length = 430
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 199/339 (58%), Gaps = 15/339 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL I V G+Q PNPF + S PP + ++RAF+ GWG VV KT+ +IN + R+A
Sbjct: 3 DLRINVAGIQSPNPFWLASAPPTNSGYQVQRAFEAGWGGVVWKTL---GEPIINTSSRFA 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ ++G+ NIELI+DRPLE LKE + K +PD +I S+M E + +
Sbjct: 60 AV------SFNGQRVVGFNNIELITDRPLEVNLKEIYETKKRFPDHAVIVSLMVEPKQDS 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ +VE G+D +E+NF CPHGM ER MG+A GQ L+E+ W+ A PV K
Sbjct: 114 WHEIVKKVEAVGVDGLELNFGCPHGMAERGMGSASGQVPALVEKQTYWVKEVAKTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT A A R G++ +S INTI S+ G+DL T P V G GGY AV
Sbjct: 174 LTPNITDITATAEAAERGGADCLSMINTINSLAGVDLDTWNTIPHVGGKGAHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V A+ + +SGIGG+ +A E++L+GA VQVCT M HG+
Sbjct: 234 KPIALHMVGECARNPRITI-----PISGIGGIANWQNAVEYLLMGATGVQVCTAAMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + E L +++ +S+ D G S+ ++ +L
Sbjct: 289 RIVEDMIEGLNNYLDEKGIASVIDIVGKSVPKYSDWGDL 327
>gi|288554818|ref|YP_003426753.1| dihydropyrimidine dehydrogenase subunit B [Bacillus pseudofirmus
OF4]
gi|288545978|gb|ADC49861.1| dihydropyrimidine dehydrogenase [Bacillus pseudofirmus OF4]
Length = 428
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/334 (41%), Positives = 197/334 (58%), Gaps = 15/334 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL I G++ PNPF + S PP + ++RAF+ GWG V KT+ ++NV+ R+A
Sbjct: 3 DLRIDFAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GDPILNVSSRFA 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ + G+ NIELI+DRPLE LKE + K +PD ++IAS+M E + A
Sbjct: 60 AV------SFNGQKVAGFNNIELITDRPLEVNLKEIYETKKRFPDHVIIASLMVEPRQEA 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ RVE+ G+D +E+NF CPHGM ER MGAA GQ L+E+ W A PV K
Sbjct: 114 WHEIVKRVEDVGVDGLELNFGCPHGMAERGMGAASGQVPELVEKQTYWAKEVAQTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT A A++ G++ VS INTI S+ G+D+ + P V G GGY AV
Sbjct: 174 LTPNITDITVTAEAAVQGGADAVSMINTINSLAGVDIDSWNTVPHVAGKGAHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V A+ + +SG+GGV +A EF+L+GA VQVCT M HG+
Sbjct: 234 KPIALNMVAECARNPHV-----NVPISGMGGVSNWENAVEFMLMGATGVQVCTAAMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +++ S+ D G S+ ++
Sbjct: 289 RIVEDMLDGLNNYLDEKGIESVMDIVGKSVTNYS 322
>gi|398870173|ref|ZP_10625522.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM74]
gi|398209360|gb|EJM96036.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM74]
Length = 424
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 213/352 (60%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G+ NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVLGFNNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KNILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ ++L+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVANPMVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ +SGIGG+ DAAEFI LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPISGIGGIGNWRDAAEFIALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M ++S+ +F G ++ +Y + +++ ++ QEA
Sbjct: 293 IVEDMKDGLSRWMDSQGYASVSEFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|309788035|ref|ZP_07682644.1| uncharacterized protein yeiA [Shigella dysenteriae 1617]
gi|308924169|gb|EFP69667.1| uncharacterized protein yeiA [Shigella dysenteriae 1617]
Length = 411
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
T NI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TLNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLTDQGFDSLQEMVG 317
>gi|288962204|ref|YP_003452499.1| dihydropyrimidine dehydrogenase (NADP+) [Azospirillum sp. B510]
gi|288914470|dbj|BAI75955.1| dihydropyrimidine dehydrogenase (NADP+) [Azospirillum sp. B510]
Length = 427
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/339 (40%), Positives = 200/339 (58%), Gaps = 11/339 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL T+ G++ PNPF + S PP + RAF GWG VV KT+ D V+NV+ RY
Sbjct: 3 DLRSTIAGIRSPNPFWLASAPPTDKAYNVVRAFKAGWGGVVWKTLGEDP-PVVNVSSRY- 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
GA+ ++IG+ NIELISDRPLE L+E ++K +PD+ ++ S+M +AAW
Sbjct: 61 ----GAHLDTDRRMIGFNNIELISDRPLEVNLREIIEVKRDWPDRAMVVSLMATMTEAAW 116
Query: 166 EELIDRVEETGI-DAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
L RV ETG D +E+N CPHGM ER MG+A+GQ ++E+V W+ +PV K
Sbjct: 117 AGLARRVAETGAADGLELNLGCPHGMCERGMGSAIGQVPEMVEQVTRWVKNAVNLPVIVK 176
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNIT+I A A R G++ +S INT+ S++ +DL + P P V+G + GGY AV
Sbjct: 177 LTPNITNILWSAEAAKRGGADAISLINTVNSIVAVDLDAMAPTPVVDGKGSHGGYCGPAV 236
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGG+ T DAAEF+ LGA VQVCT M +G+
Sbjct: 237 KPIALNMVAEIAR----NPDTSGLPVSGIGGITTWRDAAEFLALGATNVQVCTAAMTYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + L ++M + ++++ G ++ +L
Sbjct: 293 KIVEDMIGGLSNWMDGKGYRTLDELSGRAVRNVVNWNDL 331
>gi|425898959|ref|ZP_18875550.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|397889307|gb|EJL05789.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas chlororaphis subsp. aureofaciens 30-84]
Length = 424
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 199/329 (60%), Gaps = 10/329 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KNILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRMAARAAHRGGADAVSLINTINSITSVDLERMVANPMVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ T D AEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQT----RGLPICGIGGIGTWRDVAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+V+ + + L +M + S++DF G ++
Sbjct: 293 IVEEMKDGLSRWMDSQGYQSLQDFSGRAV 321
>gi|398929266|ref|ZP_10663873.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM48]
gi|426409831|ref|YP_007029930.1| dihydropyrimidine dehydrogenase [Pseudomonas sp. UW4]
gi|398167304|gb|EJM55373.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM48]
gi|426268048|gb|AFY20125.1| dihydropyrimidine dehydrogenase [Pseudomonas sp. UW4]
Length = 424
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 213/352 (60%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G+ NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVLGFNNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ ++L+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVANPMVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ +SGIGG+ DAAEFI LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPISGIGGIGNWRDAAEFIALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M ++S+ +F G ++ +Y + +++ ++ QEA
Sbjct: 293 IVEDMKDGLSRWMDSQGYASVAEFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|149183199|ref|ZP_01861646.1| dihydropyrimidine dehydrogenase [Bacillus sp. SG-1]
gi|148849095|gb|EDL63298.1| dihydropyrimidine dehydrogenase [Bacillus sp. SG-1]
Length = 428
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 200/334 (59%), Gaps = 15/334 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+L+I + G++ PNPF + S PP + ++RAF+ GWG V KT+ +INV+ R+A
Sbjct: 3 NLNIDLAGIKSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GEPIINVSSRFA 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ + G+ NIELI+DRPLE LKE + K +P+ +IAS+M E +
Sbjct: 60 AV------SFNGQRVAGFNNIELITDRPLEVNLKEIYETKKRFPNHAIIASLMVEPKQEK 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ +VE G+D +E+NF CPHGM ER MGAA GQ L+E+ W A PV K
Sbjct: 114 WHEIVKKVEAVGVDGLELNFGCPHGMAERGMGAASGQVPELVEKQTYWAKEVAKTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT A A++ G++ VS INTI S+ G+DL + P V G GGY AV
Sbjct: 174 LTPNITDITVTAEAAVQGGADAVSMINTINSLAGVDLDSWNTIPHVAGKGAHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PI+L V A+ + + +SG+GGV DA EFIL+GA+ VQVCT M HG+
Sbjct: 234 KPISLNMVAECARNPRV-----NVPISGMGGVSNWQDAVEFILMGASGVQVCTAAMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +++ +S++D G S+ ++
Sbjct: 289 RIVEDMIDGLNNYLDEKGIASVQDIVGKSVPKYS 322
>gi|392955834|ref|ZP_10321364.1| dihydropyrimidine dehydrogenase subunit B [Bacillus macauensis
ZFHKF-1]
gi|391878076|gb|EIT86666.1| dihydropyrimidine dehydrogenase subunit B [Bacillus macauensis
ZFHKF-1]
Length = 422
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/334 (41%), Positives = 196/334 (58%), Gaps = 15/334 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL + G+ PNPF + S PP + ++RAF+ GWG V KT+ +IN + R+A
Sbjct: 3 DLRTNLAGITSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GEPIINTSARFA 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S +G+ + G+ NIELI+DRPL+ LKE + K +P +IAS+M E +
Sbjct: 60 AI------SFQGKKVAGFNNIELITDRPLDVNLKEIYETKKRFPHHAIIASLMVEPKQEK 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ RVE+ G+D +E+NF CPHGM ER MGAA GQ L++ W A PV K
Sbjct: 114 WHEIVKRVEDVGVDGLELNFGCPHGMAERGMGAASGQQPDLVQAQTTWAKEVAKTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT AR A+ G++ +S INTI S+MG+DL + + P V G GGY AV
Sbjct: 174 LTPNITDITVTARAAVNGGADAISMINTINSLMGVDLDSWQTVPSVAGKGAHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V A+ +SGIGGV T DA EF+L+GA VQVCT M HG+
Sbjct: 234 KPIALNMVAECARHPAIAV-----PISGIGGVGTWQDAVEFMLMGATGVQVCTAAMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L ++++ +S+ + G S+ ++
Sbjct: 289 SIVEDMIDGLNNYLEEKGLASVSELIGKSVANYS 322
>gi|70729914|ref|YP_259653.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas protegens
Pf-5]
gi|68344213|gb|AAY91819.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas protegens Pf-5]
Length = 424
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 210/352 (59%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ +++G NIELI+DR LE LKE Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGPNREVMGINNIELITDRSLEINLKEITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KAILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRMAARAAHRGGADAVSLINTINSITSVDLERMVAHPMVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + + GIGG+ + DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQT----RGLPICGIGGIGSWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M + S++DF G ++ +Y + +++ R+ Q+A
Sbjct: 293 IVEEMKDGLSRWMDSQGYRSLQDFSGRAVGNTTDWKYLDINYQVIARIDQQA 344
>gi|416274745|ref|ZP_11643793.1| dihydropyrimidine dehydrogenase [Shigella dysenteriae CDC 74-1112]
gi|420380647|ref|ZP_14880109.1| dihydroorotate dehydrogenase family domain protein [Shigella
dysenteriae 225-75]
gi|320173376|gb|EFW48577.1| dihydropyrimidine dehydrogenase [Shigella dysenteriae CDC 74-1112]
gi|391301793|gb|EIQ59674.1| dihydroorotate dehydrogenase family domain protein [Shigella
dysenteriae 225-75]
Length = 304
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 192/313 (61%), Gaps = 13/313 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFM 358
+V+ + L ++
Sbjct: 292 IVEDMASGLSHYL 304
>gi|395649533|ref|ZP_10437383.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 424
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/352 (42%), Positives = 210/352 (59%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KNILPLVEATGCDGIELNFGCPHGMPERGMGAAVGQMPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAYRGGADAVSLINTINSITSVDLERMVALPTVGTQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + GIGG+ DAAEFI LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTH----GLPICGIGGIGNWRDAAEFIALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M ++S++DF G ++ +Y + +++ ++ QEA
Sbjct: 293 IVEEMKDGLSRWMDSQGYASLQDFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|418827447|ref|ZP_13382594.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392799656|gb|EJA55912.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
Length = 436
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 208/357 (58%), Gaps = 15/357 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQL--RMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR--MQQEAIQQRKAVRKG 400
+V+ + L ++ F+S+++ G + EL R + I Q K V G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIGLANGNIIPAEELDRSYIVYPRINQEKCVGCG 348
>gi|437616829|ref|ZP_20802581.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648903 1-6]
gi|435261557|gb|ELO40711.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648903 1-6]
Length = 394
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQL--RMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F+S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIG 317
>gi|432895166|ref|ZP_20106886.1| dihydroorotate dehydrogenase [Escherichia coli KTE165]
gi|431421533|gb|ELH03745.1| dihydroorotate dehydrogenase [Escherichia coli KTE165]
Length = 411
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/326 (43%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ LE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHSLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ +D+ +SGIGG+ET DAAEF+LLG+ T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGSATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFDSLQEMVG 317
>gi|423140758|ref|ZP_17128396.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379053312|gb|EHY71203.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 411
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 207/357 (57%), Gaps = 15/357 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G+ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVTFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQL--RMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR--MQQEAIQQRKAVRKG 400
+V+ + L ++ F+S+++ G + EL R + I Q K V G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIGLANSNIIPAEELDRSYIVYPQINQEKCVGCG 348
>gi|167551143|ref|ZP_02344898.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205324061|gb|EDZ11900.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
Length = 411
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIAMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQL--RMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F+S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIG 317
>gi|204929087|ref|ZP_03220230.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|452119608|ref|YP_007469856.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
gi|204321631|gb|EDZ06830.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|451908612|gb|AGF80418.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Javiana str. CFSAN001992]
Length = 411
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQL--QMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F+S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIG 317
>gi|339999950|ref|YP_004730833.1| pyrimidine metabolism oxidoreductase [Salmonella bongori NCTC
12419]
gi|339513311|emb|CCC31061.1| putative pyrimidine metabolism oxidoreductase [Salmonella bongori
NCTC 12419]
Length = 411
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQLR--MHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F+S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIG 317
>gi|395494992|ref|ZP_10426571.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas sp. PAMC
25886]
Length = 424
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 211/352 (59%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KHILPLVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAYRGGADAVSLINTINSITSVDLERMVALPMVGTQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ + GIGG+ DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPICGIGGIGNWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M +SS+++F G ++ +Y + +++ ++ QEA
Sbjct: 293 IVEEMKDGLSRWMDSQGYSSLQEFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|168242273|ref|ZP_02667205.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|194448536|ref|YP_002046240.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197261723|ref|ZP_03161797.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|200387718|ref|ZP_03214330.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|386591998|ref|YP_006088398.1| Dihydropyrimidine dehydrogenase [NADP+] [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|419728293|ref|ZP_14255259.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41579]
gi|419736476|ref|ZP_14263316.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41563]
gi|419741039|ref|ZP_14267751.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41573]
gi|419745194|ref|ZP_14271837.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41566]
gi|419746836|ref|ZP_14273411.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41565]
gi|421570026|ref|ZP_16015720.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|421574423|ref|ZP_16020044.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|421585701|ref|ZP_16031193.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
gi|194406840|gb|ACF67059.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|197239978|gb|EDY22598.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|199604816|gb|EDZ03361.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|205338639|gb|EDZ25403.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|381291785|gb|EIC33014.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41563]
gi|381292983|gb|EIC34156.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41573]
gi|381299830|gb|EIC40898.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41579]
gi|381306618|gb|EIC47491.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41566]
gi|381320710|gb|EIC61252.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41565]
gi|383799042|gb|AFH46124.1| Dihydropyrimidine dehydrogenase [NADP+] [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|402524623|gb|EJW31920.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|402525519|gb|EJW32807.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|402529551|gb|EJW36784.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
Length = 411
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 208/357 (58%), Gaps = 15/357 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQL--RMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR--MQQEAIQQRKAVRKG 400
+V+ + L ++ F+S+++ G + EL R + I Q K V G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIGLANGNIIPAEELDRSYIVYPRINQEKCVGCG 348
>gi|224583312|ref|YP_002637110.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|224467839|gb|ACN45669.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
Length = 411
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITSIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQL--RMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F+S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIG 317
>gi|226312824|ref|YP_002772718.1| dihydropyrimidine dehydrogenase [Brevibacillus brevis NBRC 100599]
gi|226095772|dbj|BAH44214.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 425
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/333 (40%), Positives = 190/333 (57%), Gaps = 13/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI + G+Q PNPF + S PP + ++RAF+ GWG V KT+ +INVT R+A
Sbjct: 3 DLSINLAGIQSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GEPIINVTSRFA 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G ++ G+ NIELI+D+PLE LKE + K +P LIAS+M E+ + AW
Sbjct: 60 GLNFGGQ-----RVFGFNNIELITDKPLEVNLKEMDETKRRFPKHTLIASLMVEHKREAW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ +VE G+D +E+NF CPHGM ER MG+AVGQ L+ + W+ A PV K+
Sbjct: 115 HEIVKKVEAIGVDGLELNFGCPHGMAERGMGSAVGQHPDLIRQQVEWVKEVAQTPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A G++ +S INTI S+MG+DL P P V+G GGY AV
Sbjct: 175 TPNITDIRFTARAASLGGADAISMINTINSLMGVDLDKWLPIPHVDGKGAHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V A+ K D EF+L+GA VQVCT M HG+
Sbjct: 235 PIALNMVAECARDPKVGIPISGIGGI-----SDWRDTVEFLLMGATGVQVCTAAMHHGFR 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +++ +S+ D G ++ ++
Sbjct: 290 IVEDMIDGLTNYLDQRGIASVMDIVGKAVHTYS 322
>gi|304394558|ref|ZP_07376477.1| dihydropyrimidine dehydrogenase [NADP+] [Ahrensia sp. R2A130]
gi|303293219|gb|EFL87600.1| dihydropyrimidine dehydrogenase [NADP+] [Ahrensia sp. R2A130]
Length = 437
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 201/358 (56%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ V+NV PRY
Sbjct: 3 DLTSNFVGIKSPNPFWLASAPPTDKAYNVERAFEAGWGGVVWKTLGEAGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR LE LKE ++K +PD+ ++ S+M +
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLEINLKEITEVKKRWPDRAMVVSLMVPCEEEP 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+++I RV ETG D +E+NF CPHGM ER MGAAVGQ ++ V W +PV K
Sbjct: 118 WKQIIHRVAETGADGVELNFGCPHGMSERGMGAAVGQVPEYIQMVTEWCKTYGELPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN+TD+ PAR A G++ VS INTI S++ IDL + PEP ++G + GGY AV
Sbjct: 178 LTPNVTDVRYPARAAKAGGADAVSLINTINSIVSIDLDKMAPEPTIDGKGSHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ ++ T DAAE+I LG VQVCT M +G+
Sbjct: 238 KPIALHMVADIARDQETAGIPISGIGGIT----TWRDAAEYIALGCGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L+ +M ++IEDFRG + T + L + + I Q K + G
Sbjct: 294 KIVEEMISGLEAWMDEQGHATIEDFRGMAAPNVTDWQYLNLNYVTKAQIDQDKCISCG 351
>gi|194446223|ref|YP_002041458.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|418789265|ref|ZP_13345052.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418794066|ref|ZP_13349788.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418796663|ref|ZP_13352354.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418809739|ref|ZP_13365291.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418813893|ref|ZP_13369414.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418815160|ref|ZP_13370668.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21538]
gi|418822949|ref|ZP_13378360.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22425]
gi|418830006|ref|ZP_13384969.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418836388|ref|ZP_13391272.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418840994|ref|ZP_13395817.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418850868|ref|ZP_13405584.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418855817|ref|ZP_13410468.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418857925|ref|ZP_13412548.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418862220|ref|ZP_13416764.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|194404886|gb|ACF65108.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|392760506|gb|EJA17341.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392762061|gb|EJA18877.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392770036|gb|EJA26764.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392773824|gb|EJA30520.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392775119|gb|EJA31814.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392787206|gb|EJA43754.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22425]
gi|392793539|gb|EJA49983.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21538]
gi|392800749|gb|EJA56979.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392802239|gb|EJA58453.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392809660|gb|EJA65694.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392818718|gb|EJA74602.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392820858|gb|EJA76699.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392834603|gb|EJA90207.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392836672|gb|EJA92252.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
Length = 411
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 208/357 (58%), Gaps = 15/357 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQL--RMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR--MQQEAIQQRKAVRKG 400
+V+ + L ++ F+S+++ G + EL R + I Q K V G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIGLANGNIIPAEELDRSYIVYPRINQEKCVGCG 348
>gi|416508122|ref|ZP_11735905.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416513718|ref|ZP_11738039.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416529764|ref|ZP_11744531.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416539691|ref|ZP_11750098.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416551699|ref|ZP_11756605.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|416561691|ref|ZP_11761688.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|363552167|gb|EHL36473.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363552737|gb|EHL37020.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363559771|gb|EHL43923.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363566114|gb|EHL50133.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363567298|gb|EHL51298.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363573884|gb|EHL57758.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
Length = 411
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLDAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQLR--MHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F+S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIG 317
>gi|417519272|ref|ZP_12181459.1| Dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|353647059|gb|EHC90290.1| Dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
Length = 411
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQL--RMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F+S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIG 317
>gi|16765517|ref|NP_461132.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|62180774|ref|YP_217191.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161613121|ref|YP_001587086.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167991114|ref|ZP_02572213.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168229542|ref|ZP_02654600.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|168259472|ref|ZP_02681445.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|168466133|ref|ZP_02700003.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|168818103|ref|ZP_02830103.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194470352|ref|ZP_03076336.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|197248087|ref|YP_002147158.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|198241985|ref|YP_002216271.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205353322|ref|YP_002227123.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207857621|ref|YP_002244272.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|238912629|ref|ZP_04656466.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|374981221|ref|ZP_09722551.1| Dihydropyrimidine [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|375115103|ref|ZP_09760273.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|375119755|ref|ZP_09764922.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|375124161|ref|ZP_09769325.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|378445622|ref|YP_005233254.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378450874|ref|YP_005238233.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378700100|ref|YP_005182057.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|378954454|ref|YP_005211941.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|378984749|ref|YP_005247904.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378989574|ref|YP_005252738.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379701415|ref|YP_005243143.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383496895|ref|YP_005397584.1| oxidoreductase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|409250799|ref|YP_006886607.1| Dihydropyrimidine dehydrogenase [NADP+] DHPDHase; DPD;
Dihydrouracil dehydrogenase; Dihydrothymine
dehydrogenase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|416566652|ref|ZP_11763944.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|417342389|ref|ZP_12123214.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|417374445|ref|ZP_12144198.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|417532274|ref|ZP_12186707.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|418512904|ref|ZP_13079139.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Pomona str. ATCC 10729]
gi|418760501|ref|ZP_13316655.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418765102|ref|ZP_13321195.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418772116|ref|ZP_13328120.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418775332|ref|ZP_13331290.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418781495|ref|ZP_13337378.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418783761|ref|ZP_13339606.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418803296|ref|ZP_13358917.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|419789721|ref|ZP_14315401.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Newport str. Levine 1]
gi|419792217|ref|ZP_14317859.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Newport str. Levine 15]
gi|421359399|ref|ZP_15809692.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|421364031|ref|ZP_15814269.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639016-6]
gi|421367071|ref|ZP_15817273.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 640631]
gi|421373051|ref|ZP_15823196.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-0424]
gi|421375416|ref|ZP_15825529.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|421382198|ref|ZP_15832249.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|421386912|ref|ZP_15836918.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|421391251|ref|ZP_15841222.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|421395621|ref|ZP_15845557.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|421397940|ref|ZP_15847849.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|421402505|ref|ZP_15852363.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|421411773|ref|ZP_15861537.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-1427]
gi|421418187|ref|ZP_15867893.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|421422745|ref|ZP_15872413.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|421424897|ref|ZP_15874534.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|421433231|ref|ZP_15882799.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|421434132|ref|ZP_15883682.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|421441874|ref|ZP_15891334.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 6-18]
gi|421443239|ref|ZP_15892681.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|421449781|ref|ZP_15899161.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|422026463|ref|ZP_16372854.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|422031484|ref|ZP_16377653.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|427551122|ref|ZP_18928157.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|427567354|ref|ZP_18932872.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|427587564|ref|ZP_18937662.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|427611274|ref|ZP_18942529.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|427634869|ref|ZP_18947422.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|427656494|ref|ZP_18952187.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|427661646|ref|ZP_18957100.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|427670208|ref|ZP_18961900.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|436609108|ref|ZP_20513669.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22704]
gi|436726188|ref|ZP_20519101.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|436802770|ref|ZP_20525503.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS44]
gi|436809497|ref|ZP_20528877.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436814751|ref|ZP_20532302.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436844173|ref|ZP_20537931.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436854497|ref|ZP_20544131.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436855779|ref|ZP_20544904.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436864280|ref|ZP_20550247.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436870253|ref|ZP_20554059.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436877744|ref|ZP_20558672.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436886683|ref|ZP_20563103.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436893538|ref|ZP_20567445.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436901286|ref|ZP_20572196.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436912677|ref|ZP_20578506.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436920317|ref|ZP_20582913.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436926654|ref|ZP_20586480.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436936626|ref|ZP_20592066.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436940638|ref|ZP_20594582.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436946638|ref|ZP_20598165.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436961980|ref|ZP_20605354.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436969168|ref|ZP_20608289.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436976843|ref|ZP_20612093.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436989610|ref|ZP_20616617.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437001022|ref|ZP_20620818.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437022385|ref|ZP_20628354.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437036133|ref|ZP_20633865.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437044127|ref|ZP_20637080.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437052088|ref|ZP_20641648.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437059146|ref|ZP_20645993.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437064811|ref|ZP_20648585.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437077133|ref|ZP_20655341.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437083617|ref|ZP_20659271.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437092037|ref|ZP_20663637.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|437113876|ref|ZP_20669078.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|437122069|ref|ZP_20672106.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-16]
gi|437128649|ref|ZP_20675336.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-19]
gi|437139192|ref|ZP_20681674.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|437144136|ref|ZP_20684750.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|437151272|ref|ZP_20689149.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|437162706|ref|ZP_20696268.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE15-1]
gi|437169954|ref|ZP_20700049.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|437174140|ref|ZP_20702105.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|437181180|ref|ZP_20706351.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|437235897|ref|ZP_20713883.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
gi|437261932|ref|ZP_20718678.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|437267384|ref|ZP_20721136.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|437280655|ref|ZP_20728032.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|437289937|ref|ZP_20731315.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|437311877|ref|ZP_20735985.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|437330415|ref|ZP_20741579.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|437346870|ref|ZP_20747024.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|437411010|ref|ZP_20752786.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 22-17]
gi|437433704|ref|ZP_20756305.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|437461027|ref|ZP_20761980.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|437494364|ref|ZP_20772393.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|437535227|ref|ZP_20781461.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|437559628|ref|ZP_20785844.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648900 1-16]
gi|437572293|ref|ZP_20789055.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 1-17]
gi|437599999|ref|ZP_20797158.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648902 6-8]
gi|437662170|ref|ZP_20813387.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 653049 13-19]
gi|437686458|ref|ZP_20819381.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|437690113|ref|ZP_20820207.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|437711827|ref|ZP_20826845.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|437730240|ref|ZP_20831166.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 16-16]
gi|437813082|ref|ZP_20841667.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|437876693|ref|ZP_20848668.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 6.0562-1]
gi|438041795|ref|ZP_20855774.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|438082726|ref|ZP_20857912.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|438099372|ref|ZP_20863388.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|438109505|ref|ZP_20867468.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|440763099|ref|ZP_20942146.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|440769251|ref|ZP_20948211.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|440771396|ref|ZP_20950314.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|445146626|ref|ZP_21387840.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Dublin str. SL1438]
gi|445165194|ref|ZP_21394077.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE8a]
gi|445185315|ref|ZP_21398916.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 20037]
gi|445229402|ref|ZP_21405046.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE10]
gi|445265159|ref|ZP_21410054.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
gi|445337489|ref|ZP_21415980.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 18569]
gi|445361598|ref|ZP_21423890.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. PT23]
gi|81522477|sp|Q8ZNL7.1|PREA_SALTY RecName: Full=NAD-dependent dihydropyrimidine dehydrogenase subunit
PreA; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|16420724|gb|AAL21091.1| putative dihydropyrimidine dehydrogenase [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|62128407|gb|AAX66110.1| putative dihydropyrimidine dehydrogenase [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161362485|gb|ABX66253.1| hypothetical protein SPAB_00829 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194456716|gb|EDX45555.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|195631189|gb|EDX49749.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|197211790|gb|ACH49187.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197936501|gb|ACH73834.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|205273103|emb|CAR38058.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205330434|gb|EDZ17198.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205335946|gb|EDZ22710.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|205345012|gb|EDZ31776.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|205351177|gb|EDZ37808.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|206709424|emb|CAR33765.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261247401|emb|CBG25226.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267994252|gb|ACY89137.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301158748|emb|CBW18260.1| hypothetical oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312913177|dbj|BAJ37151.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320086627|emb|CBY96398.1| Dihydropyrimidine dehydrogenase [NADP+] DHPDHase; DPD;
Dihydrouracil dehydrogenase; Dihydrothymine
dehydrogenase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321224841|gb|EFX49904.1| Dihydropyrimidine [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|322715249|gb|EFZ06820.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|323130514|gb|ADX17944.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|326624022|gb|EGE30367.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|326628411|gb|EGE34754.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|332989121|gb|AEF08104.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|353599483|gb|EHC55641.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|353663117|gb|EHD01907.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|357205065|gb|AET53111.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|357956702|gb|EHJ82024.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|363579488|gb|EHL63270.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|366082841|gb|EHN46771.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Pomona str. ATCC 10729]
gi|380463716|gb|AFD59119.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|392615506|gb|EIW97945.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Newport str. Levine 1]
gi|392618941|gb|EIX01327.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Newport str. Levine 15]
gi|392732230|gb|EIZ89441.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392742051|gb|EIZ99146.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392742581|gb|EIZ99668.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392747263|gb|EJA04264.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392748405|gb|EJA05391.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392756773|gb|EJA13668.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392772825|gb|EJA29522.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|395985022|gb|EJH94195.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|395985506|gb|EJH94676.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639016-6]
gi|395989726|gb|EJH98860.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 640631]
gi|395998679|gb|EJI07706.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-0424]
gi|395999298|gb|EJI08320.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|396005402|gb|EJI14381.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|396011553|gb|EJI20463.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|396012260|gb|EJI21158.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|396012661|gb|EJI21557.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|396032042|gb|EJI40767.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|396032136|gb|EJI40860.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|396039354|gb|EJI47982.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|396042060|gb|EJI50683.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|396045274|gb|EJI53868.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-1427]
gi|396049447|gb|EJI57990.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|396058493|gb|EJI66954.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|396060738|gb|EJI69179.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|396062551|gb|EJI70962.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 6-18]
gi|396068597|gb|EJI76943.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|396071023|gb|EJI79350.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|414017541|gb|EKT01249.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|414018485|gb|EKT02134.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|414020242|gb|EKT03831.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|414032225|gb|EKT15236.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|414033646|gb|EKT16595.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|414036625|gb|EKT19442.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|414046794|gb|EKT29109.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|414047797|gb|EKT30063.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|414052541|gb|EKT34577.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|414059231|gb|EKT40820.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|434957037|gb|ELL50711.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS44]
gi|434967314|gb|ELL60149.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434970288|gb|ELL62908.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22704]
gi|434972867|gb|ELL65255.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434978759|gb|ELL70751.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434982523|gb|ELL74342.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|434983300|gb|ELL75108.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434991993|gb|ELL83463.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434995315|gb|ELL86631.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435002581|gb|ELL93646.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435008628|gb|ELL99451.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435011926|gb|ELM02629.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435018534|gb|ELM08996.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435020720|gb|ELM11109.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435026922|gb|ELM17053.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435027836|gb|ELM17928.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435036495|gb|ELM26314.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435039464|gb|ELM29245.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435045543|gb|ELM35171.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435051119|gb|ELM40623.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435058438|gb|ELM47776.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435059269|gb|ELM48559.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435071177|gb|ELM60127.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435071319|gb|ELM60267.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435074467|gb|ELM63299.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435075576|gb|ELM64390.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435077013|gb|ELM65787.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435081331|gb|ELM69973.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435091490|gb|ELM79881.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435094959|gb|ELM83298.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435100553|gb|ELM88721.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435103971|gb|ELM92045.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435107360|gb|ELM95345.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435112943|gb|ELN00808.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|435116174|gb|ELN03925.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|435124215|gb|ELN11682.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-16]
gi|435128165|gb|ELN15516.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-19]
gi|435132714|gb|ELN19912.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|435139127|gb|ELN26131.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|435142626|gb|ELN29513.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE15-1]
gi|435145155|gb|ELN31984.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|435147734|gb|ELN34486.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|435157989|gb|ELN44410.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|435162303|gb|ELN48487.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|435166728|gb|ELN52694.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|435170143|gb|ELN55899.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|435175900|gb|ELN61302.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|435182201|gb|ELN67233.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|435183009|gb|ELN67984.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|435188922|gb|ELN73584.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
gi|435189298|gb|ELN73943.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|435189599|gb|ELN74223.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|435204215|gb|ELN87912.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 22-17]
gi|435214119|gb|ELN96961.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|435220719|gb|ELO03001.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|435227262|gb|ELO08771.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|435238939|gb|ELO19548.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648900 1-16]
gi|435240588|gb|ELO20979.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|435247933|gb|ELO27862.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 1-17]
gi|435262917|gb|ELO41999.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648902 6-8]
gi|435266310|gb|ELO45071.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|435267816|gb|ELO46481.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 653049 13-19]
gi|435281742|gb|ELO59395.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|435288047|gb|ELO65138.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|435289501|gb|ELO66461.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 16-16]
gi|435297164|gb|ELO73459.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|435320384|gb|ELO93023.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|435321870|gb|ELO94219.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|435325926|gb|ELO97770.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|435332654|gb|ELP03565.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|435334216|gb|ELP04864.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 6.0562-1]
gi|436415239|gb|ELP13160.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|436421028|gb|ELP18879.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|436421742|gb|ELP19585.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|444845523|gb|ELX70733.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Dublin str. SL1438]
gi|444865495|gb|ELX90265.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE10]
gi|444867032|gb|ELX91737.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE8a]
gi|444870131|gb|ELX94668.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 20037]
gi|444873376|gb|ELX97676.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 18569]
gi|444884604|gb|ELY08428.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. PT23]
gi|444888310|gb|ELY11900.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 436]
Length = 411
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQL--RMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F+S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIG 317
>gi|388467961|ref|ZP_10142171.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas synxantha BG33R]
gi|388011541|gb|EIK72728.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas synxantha BG33R]
Length = 424
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 199/329 (60%), Gaps = 10/329 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KNILPLVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAASRGGADAVSLINTINSITSVDLERMVALPVVGTQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ + GIGG+ DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPICGIGGIGNWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+V + + L +M ++S++DF G ++
Sbjct: 293 IVDEMKDGLSRWMDSQGYTSLQDFSGRAV 321
>gi|297623162|ref|YP_003704596.1| dihydroorotate dehydrogenase family protein [Truepera radiovictrix
DSM 17093]
gi|297164342|gb|ADI14053.1| dihydroorotate dehydrogenase family protein [Truepera radiovictrix
DSM 17093]
Length = 451
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 203/339 (59%), Gaps = 12/339 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPP-GTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
DLS G++ PNPF + S PP T Y V K AFD GWG V KT+ V+NV+ RY
Sbjct: 3 DLSTDFCGVKSPNPFWLASAPPTNTAYQVCK-AFDYGWGGAVWKTI---GTPVLNVSSRY 58
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
G N ++ NIELISDRPLE L+E ++K L+PD+ +I S M E +
Sbjct: 59 GGWEYGGN-----KLAAINNIELISDRPLEVNLREIAEVKRLFPDRAVIVSAMFESDPQV 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W + + R+E+TG DAIE+N+ CPHGM ER MG+AVGQ + W+ + A+VPV K
Sbjct: 114 WADAVRRIEDTGADAIELNYGCPHGMSERGMGSAVGQVPEYCSMITEWVTSVASVPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI PAR A+ + +S INTI SV+G+DL +P V G GGY+ AV
Sbjct: 174 LTPNITDIKAPARAAIEGRAAALSLINTINSVIGVDLDAFTLKPNVGGKGGHGGYAGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL + + M E D +SG+GG++T DAAEF+LLGA ++QVCT VM +G+
Sbjct: 234 KPIALSMLSEV--MQLPETRDFRIPISGMGGIQTWRDAAEFLLLGATSLQVCTAVMHYGF 291
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+++ L + L +++ +S+ D GA+ ++ +L
Sbjct: 292 RIIEELTDGLSNWLDDKGAASVRDVIGAAAPRYSPFNQL 330
>gi|311031550|ref|ZP_07709640.1| dihydropyrimidine dehydrogenase [Bacillus sp. m3-13]
Length = 428
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 137/334 (41%), Positives = 199/334 (59%), Gaps = 15/334 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI + G++ PNPF + S PP + ++RAF+ GWG V KT+ +INV+ R+A
Sbjct: 3 DLSINLAGIKAPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GDPIINVSSRFA 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ + G+ NIELI+DRPLE L+E ++ K +PD+ +IAS+M E +
Sbjct: 60 AV------SFNGQRVAGFNNIELITDRPLEVNLREIEETKKKFPDRAVIASLMVEPKQEK 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ +VE G+D +E+NF CPHGM ER MG+A GQ L+E+ W A PV K
Sbjct: 114 WHEIVKKVEAVGVDGLELNFGCPHGMAERGMGSASGQVPDLVEKQTYWAKEAANTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT A A+R G++ VS INTI S+ G+DL + P V G GGY AV
Sbjct: 174 LTPNITDITVTAEAAVRGGADAVSMINTINSLAGVDLDSWNTIPHVGGKGAHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V A+ + + +SG+GGV +A EF+L+GA VQ+CT M HG+
Sbjct: 234 KPIALNMVGECARNPRI-----NVPISGMGGVSNWQNAVEFMLMGATGVQICTAAMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L +++ + + D G S+ ++
Sbjct: 289 RIVEDMLDGLNNYLDEKGIARVMDLVGKSVPKYS 322
>gi|77459665|ref|YP_349172.1| dihydropyrimidine dehydrogenase [Pseudomonas fluorescens Pf0-1]
gi|77383668|gb|ABA75181.1| dihydropyrimidine dehydrogenase (NADP+) / dihydroorotate oxidase B,
catalytic subunit [Pseudomonas fluorescens Pf0-1]
Length = 424
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 150/352 (42%), Positives = 211/352 (59%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVDLEHMVALPTVGSKSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ + GIGG+ + DAAEFI LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPICGIGGIGSWRDAAEFIALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V + + L +M ++SI +F G ++ +Y + +++ ++ QEA
Sbjct: 293 IVDEMKDGLSRWMDSQGYASIAEFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|56412899|ref|YP_149974.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197361830|ref|YP_002141466.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|56127156|gb|AAV76662.1| putative dihydropyrimidine dehydrogenase [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197093306|emb|CAR58754.1| putative dihydropyrimidine dehydrogenase [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
Length = 411
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSRKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQLR--MHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F+S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIG 317
>gi|168236356|ref|ZP_02661414.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|197290436|gb|EDY29791.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
Length = 411
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAVIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQLR--MHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F+S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIG 317
>gi|395230575|ref|ZP_10408879.1| dihydroorotate dehydrogenase family protein [Citrobacter sp. A1]
gi|421846549|ref|ZP_16279696.1| dihydropyrimidine dehydrogenase subunit B [Citrobacter freundii
ATCC 8090 = MTCC 1658]
gi|424731364|ref|ZP_18159948.1| dihydropyrimidine dehydrogenase [Citrobacter sp. L17]
gi|394715960|gb|EJF21745.1| dihydroorotate dehydrogenase family protein [Citrobacter sp. A1]
gi|411772143|gb|EKS55781.1| dihydropyrimidine dehydrogenase subunit B [Citrobacter freundii
ATCC 8090 = MTCC 1658]
gi|422894015|gb|EKU33830.1| dihydropyrimidine dehydrogenase [Citrobacter sp. L17]
Length = 411
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 146/340 (42%), Positives = 200/340 (58%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDSGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLSKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVVLAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQLR--MHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+V+ + L ++ F S+E+ G + EL R
Sbjct: 292 IVEDMISGLSHYLADQGFDSLEEMVGLANANIIPAEELDR 331
>gi|56965540|ref|YP_177274.1| dihydropyrimidine dehydrogenase [Bacillus clausii KSM-K16]
gi|56911786|dbj|BAD66313.1| dihydropyrimidine dehydrogenase [Bacillus clausii KSM-K16]
Length = 419
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 134/333 (40%), Positives = 199/333 (59%), Gaps = 13/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL + G+ PNPF + S PP + ++RAF+ GWG V KT+ ++N T R+A
Sbjct: 3 DLISNLAGITSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GEPIMNSTSRFA 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L NG ++ G+ NIELISDRPL+ L+E K +P+ ++AS+M E + W
Sbjct: 60 ALHF--NGK---RVAGFNNIELISDRPLDVNLREIADTKKRFPNHAIVASLMVEPKQEKW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ RVE G+D +E+NF CPHGM ER MG+A GQ L+E+ W+ A PV K+
Sbjct: 115 HEIVKRVEAVGVDGLELNFGCPHGMAERGMGSASGQVPALVEQQTVWVKEVARTPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDIT A A + G++ +S INTI S+ G+D+ T + P V+G T GGY AV
Sbjct: 175 TPNITDITATAEAAAQGGADAISLINTINSLAGVDIDTWQTIPNVDGLGTHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + A+ + + +SGIGG+ T DA +F+L+GA+ VQVCT M HG+
Sbjct: 235 PIALHMLGDCAR-----HPNVNIPISGIGGIATWQDAVQFLLMGASNVQVCTAAMHHGFR 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ L + L +++ +S+++ G S+ ++
Sbjct: 290 IVEDLLDGLSAYLEEKGLASVQELVGQSVHRYS 322
>gi|194736993|ref|YP_002115276.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194712495|gb|ACF91716.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
Length = 411
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 198/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAVIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQLR--MHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F+S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIG 317
>gi|395794580|ref|ZP_10473901.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas sp. Ag1]
gi|421137877|ref|ZP_15597953.1| dihydropyrimidine dehydrogenase [Pseudomonas fluorescens BBc6R8]
gi|395341245|gb|EJF73065.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas sp. Ag1]
gi|404510936|gb|EKA24830.1| dihydropyrimidine dehydrogenase [Pseudomonas fluorescens BBc6R8]
Length = 424
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 200/329 (60%), Gaps = 10/329 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KHILPLVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAYRGGADAVSLINTINSITSVDLERMVALPMVGTQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ + GIGG+ DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPICGIGGIGNWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+V+ + + L +M +SS+++F G ++
Sbjct: 293 IVEEMKDGLSRWMDSQGYSSLQEFSGRAV 321
>gi|423094816|ref|ZP_17082612.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas fluorescens Q2-87]
gi|397885579|gb|EJL02062.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas fluorescens Q2-87]
Length = 424
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 211/352 (59%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KRILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVDLDRMVALPSVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ + GIGG+ + DAAEFI LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPICGIGGIGSWRDAAEFIALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M H ++++ F G ++ +Y + +++ ++ QEA
Sbjct: 293 IVEEMKDGLSRWMDDHGHANLQAFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|389684168|ref|ZP_10175499.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas chlororaphis O6]
gi|388552507|gb|EIM15769.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas chlororaphis O6]
Length = 424
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 144/329 (43%), Positives = 199/329 (60%), Gaps = 10/329 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KNILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRMAARAAHRGGADAVSLINTINSITSVDLERMVANPMVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ + GIGG+ + DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPICGIGGIGSWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+V+ + + L +M + S++ F G ++
Sbjct: 293 IVEEMKDGLSRWMDSQGYGSLQQFSGKAV 321
>gi|254461883|ref|ZP_05075299.1| dihydroorotate dehydrogenase family protein [Rhodobacterales
bacterium HTCC2083]
gi|206678472|gb|EDZ42959.1| dihydroorotate dehydrogenase family protein [Rhodobacteraceae
bacterium HTCC2083]
Length = 434
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 205/358 (57%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ T G+ PNPF + S PP ++RAF+ GWG VV KT+ + V+NV PRY
Sbjct: 3 DLTTTFIGITSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L L+E K++KA YPD+ +I S+M + A
Sbjct: 63 -----GAIYGADRRLLGLNNIELITDRDLFINLEEIKRVKADYPDRAIIVSLMVPCEEEA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VE+TG D IE+NF CPHGM ER MGAAVGQ +E V W + PV K
Sbjct: 118 WKAILPLVEDTGADGIELNFGCPHGMSERGMGAAVGQVPEYIEMVTRWCKQYYSKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITD+ +PA A G++ VS INTI S+ ++L ++ PEP ++G T GGY AV
Sbjct: 178 LTPNITDVRKPAAAARAGGADAVSLINTINSITSVNLDSMSPEPSIDGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V IA+ + +SGIGGV T DAAEF+ LG VQVCT M +G+
Sbjct: 238 KPIAMSMVSEIARAEAT----AGMPISGIGGVTTWRDAAEFMALGCGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L +M + + DF G ++ T + L + + I Q + G
Sbjct: 294 KIVQEMISGLSQWMDEKGYENTTDFVGMAVPNTTDWQYLNLNYIAKAKIDQDLCISCG 351
>gi|294501167|ref|YP_003564867.1| dihydroorotate dehydrogenase [Bacillus megaterium QM B1551]
gi|294351104|gb|ADE71433.1| dihydroorotate dehydrogenase [Bacillus megaterium QM B1551]
Length = 426
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/333 (41%), Positives = 198/333 (59%), Gaps = 13/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL+ + G+Q PNPF + S PP + ++RAF+ GWG V KT+ ++NV+ R+A
Sbjct: 3 DLTTNLAGIQSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GDPILNVSSRFA 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ G NG ++ G+ NIELI+DRPLE LKE + K +P+ +IAS+M E + W
Sbjct: 60 AV--GFNGQ---RVAGFNNIELITDRPLEVNLKEIYETKKKFPNHAIIASLMVEPQQEKW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ +VE+ G+D +E+NF CPHGM ER MGAA GQ L+E+ W A PV K+
Sbjct: 115 HEIVKKVEDVGVDGLELNFGCPHGMAERGMGAASGQVPDLVEKQTHWAKEVAQTPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDIT A A+R G++ VS INTI S+ G+D+ + P V G GGY AV
Sbjct: 175 TPNITDITVTAEAAVRGGADAVSMINTINSLAGVDIHSWNTIPHVAGKGAHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V A+ +S F + +SG+GGV +A EF+L+GA VQVCT M HG+
Sbjct: 235 PIALNMV---AECARSPF--INVPISGMGGVSNWQEAVEFMLMGATGVQVCTAAMHHGFR 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L ++ + D G ++ ++
Sbjct: 290 IVEDMIQGLNYYLDERGIEKVSDIVGKAVSKYS 322
>gi|312961803|ref|ZP_07776301.1| dihydroorotate dehydrogenase 1 [Pseudomonas fluorescens WH6]
gi|311284062|gb|EFQ62645.1| dihydroorotate dehydrogenase 1 [Pseudomonas fluorescens WH6]
Length = 424
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/352 (41%), Positives = 210/352 (59%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ V+ TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KNILPLVQATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAYRGGADAVSLINTINSITSVDLERMVALPTVGTQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ + GIGG+ DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPICGIGGIGNWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M ++ ++DF G ++ +Y + +++ ++ QEA
Sbjct: 293 IVEEMKDGLSRWMDSQGYTRLQDFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|378950276|ref|YP_005207764.1| dihydropyrimidine dehydrogenase [NADP+] [Pseudomonas fluorescens
F113]
gi|359760290|gb|AEV62369.1| Dihydropyrimidine dehydrogenase [NADP+] [Pseudomonas fluorescens
F113]
Length = 424
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 200/329 (60%), Gaps = 10/329 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KRILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVDLDRMVALPSVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ + GIGG+ + DAAEFI LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPICGIGGIGSWRDAAEFIALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+V+ + + L +M H ++++ F G ++
Sbjct: 293 IVEEMKDGLSRWMDDHGHANLQAFSGRAV 321
>gi|423692358|ref|ZP_17666878.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas fluorescens SS101]
gi|388000451|gb|EIK61780.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas fluorescens SS101]
Length = 424
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 210/352 (59%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G NIELI+DR LE L+E Q+K +PD+ LI S+M +A+W
Sbjct: 62 -----AHYGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEASW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KNILPLVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAYRGGADAVSLINTINSITSVDLERMVALPVVGTQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + GIGG+ T DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTH----GLPICGIGGIGTWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M ++++ F G ++ +Y + +++ ++ QEA
Sbjct: 293 IVEEMKDGLSRWMDSQGHANLQAFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|408481141|ref|ZP_11187360.1| dihydropyrimidine dehydrogenase subunit B [Pseudomonas sp. R81]
Length = 424
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 210/352 (59%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGPNREVMGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KTILPLVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAYRGGADAVSLINTINSITSVDLERMVALPVVGTQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ + GIGG+ DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPICGIGGIGNWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M ++S++DF G ++ +Y + +++ ++ QEA
Sbjct: 293 IVEEMKDGLSRWMDSQGYNSLQDFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|170767624|ref|ZP_02902077.1| dihydroorotate dehydrogenase family protein [Escherichia albertii
TW07627]
gi|170123958|gb|EDS92889.1| dihydroorotate dehydrogenase family protein [Escherichia albertii
TW07627]
Length = 411
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 196/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+L V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EDLARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPVLVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ + A A G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCDVALAAKHGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M++ D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRTHPELHDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F S+++ G
Sbjct: 292 IVEDMTSGLSHYLADQGFDSLQEMVG 317
>gi|311278870|ref|YP_003941101.1| dihydroorotate dehydrogenase family protein [Enterobacter cloacae
SCF1]
gi|308748065|gb|ADO47817.1| dihydroorotate dehydrogenase family protein [Enterobacter cloacae
SCF1]
Length = 411
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 200/340 (58%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G +G++N+E I++ PL L ++LK YPD +LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FVGFKNMEQIAEHPLAENLAAIRRLKQDYPDNVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 QELAHLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKTGMPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +++ KD+ +SGIGG+E DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFVQQLRTHPELKDFPISGIGGIENWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+V+ + L ++ ++++++ G + EL R
Sbjct: 292 IVEDMISGLSHYLADRGYAALDEMVGLANSNIVPAEELDR 331
>gi|417359403|ref|ZP_12133787.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|417384309|ref|ZP_12149719.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Johannesburg str. S5-703]
gi|353589671|gb|EHC48404.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|353609289|gb|EHC62642.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Johannesburg str. S5-703]
Length = 411
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/326 (43%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKHGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV T +M +GY
Sbjct: 236 PIALRFIQQL--RMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTAIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F+S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIG 317
>gi|416540667|ref|ZP_11750472.1| dihydropyrimidine dehydrogenase, partial [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|322661451|gb|EFY57675.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
Length = 366
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 207/357 (57%), Gaps = 15/357 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PN F + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNSFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQLR--MHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR--MQQEAIQQRKAVRKG 400
+V+ + L ++ F+S+++ G + EL R + I Q K V G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIGLANGNIIPAEELDRSYIVYPRINQEKCVGCG 348
>gi|295706514|ref|YP_003599589.1| dihydroorotate dehydrogenase [Bacillus megaterium DSM 319]
gi|294804173|gb|ADF41239.1| dihydroorotate dehydrogenase [Bacillus megaterium DSM 319]
Length = 426
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/333 (41%), Positives = 198/333 (59%), Gaps = 13/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL+ + G+Q PNPF + S PP + ++RAF+ GWG V KT+ ++NV+ R+A
Sbjct: 3 DLTTNLAGIQSPNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GDPILNVSSRFA 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ G NG ++ G+ NIELI+DRPLE LKE + K +P+ +IAS+M E + W
Sbjct: 60 AV--GFNGQ---RVAGFNNIELITDRPLEVNLKEIYETKKKFPNHAIIASLMVEPQQEKW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ +VE+ G+D +E+NF CPHGM ER MGAA GQ L+E+ W A PV K+
Sbjct: 115 HEIVKKVEDVGVDGLELNFGCPHGMAERGMGAASGQVPDLVEKQTYWAKEVAQTPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDIT A A+R G++ VS INTI S+ G+D+ + P V G GGY AV
Sbjct: 175 TPNITDITVTAEAAVRGGADAVSMINTINSLAGVDIHSWNTIPHVAGKGAHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V A+ +S F + +SG+GGV +A EF+L+GA VQVCT M HG+
Sbjct: 235 PIALNMV---AECARSPF--INVPISGMGGVSNWQEAVEFMLMGATGVQVCTAAMHHGFR 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+V+ + + L ++ + D G ++ ++
Sbjct: 290 IVEDMIQGLNYYLDERGIEKVSDIVGKAVSKYS 322
>gi|455644543|gb|EMF23643.1| dihydropyrimidine dehydrogenase subunit B [Citrobacter freundii GTC
09479]
Length = 411
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/340 (42%), Positives = 199/340 (58%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDSGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLSKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + + +P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSPLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQLR--MHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+V+ + L ++ S+E+ G + EL R
Sbjct: 292 IVEDMISGLSHYLADQGLDSLEEMVGLANANIIPAEELDR 331
>gi|89097591|ref|ZP_01170480.1| dihydropyrimidine dehydrogenase [Bacillus sp. NRRL B-14911]
gi|89087887|gb|EAR66999.1| dihydropyrimidine dehydrogenase [Bacillus sp. NRRL B-14911]
Length = 429
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/334 (41%), Positives = 196/334 (58%), Gaps = 15/334 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI + G++ NPF + S PP + ++RAF+ GWG V KT+ ++NV+ R+A
Sbjct: 3 DLSIELAGIKSTNPFWLASAPPTNSGYQVQRAFEAGWGGAVWKTL---GEPILNVSSRFA 59
Query: 106 RLRAGANGSAKGQ-IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ S GQ + G+ NIELI+DRPLE LKE + K +P+ +IAS+M E +
Sbjct: 60 AV------SFNGQRVAGFNNIELITDRPLEVNLKEIYETKKKFPNNTIIASLMVEPKQEK 113
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W E++ RVEE G+D +E+NF CPHGM ER MG+A GQ L+E+ W A PV K
Sbjct: 114 WHEIVKRVEEIGVDGLELNFGCPHGMAERGMGSASGQVPELVEKQTYWAKEAARTPVIVK 173
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDIT A A++ G++ VS INTI S+ G+DL T P V G GGY AV
Sbjct: 174 LTPNITDITATAEAAVKGGADAVSMINTINSLAGVDLDTWNTIPHVGGKGAHGGYCGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V A+ +SG+GG+ +A EF+L+GA+ VQ+CT M HG+
Sbjct: 234 KPIALNMVAECARNPAISV-----PISGMGGISNWQNAVEFMLMGASGVQICTAAMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
+++ L + L +++ S+ D G S+ ++
Sbjct: 289 RIIEDLMDGLNNYLDERGIRSVRDIIGKSVPRYS 322
>gi|416424073|ref|ZP_11691341.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416434198|ref|ZP_11697532.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416438403|ref|ZP_11699490.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416447748|ref|ZP_11706001.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416450545|ref|ZP_11707620.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416460465|ref|ZP_11714773.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416470242|ref|ZP_11718767.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416476706|ref|ZP_11721194.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416491433|ref|ZP_11727067.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416496171|ref|ZP_11729028.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416575357|ref|ZP_11768389.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416586630|ref|ZP_11775642.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416594602|ref|ZP_11780434.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416602141|ref|ZP_11785198.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416607211|ref|ZP_11788393.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416611798|ref|ZP_11791027.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416623876|ref|ZP_11797658.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416630118|ref|ZP_11800525.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416636553|ref|ZP_11803116.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416652104|ref|ZP_11811506.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|416655358|ref|ZP_11812516.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416669135|ref|ZP_11819160.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416678676|ref|ZP_11822730.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416700978|ref|ZP_11829243.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416705402|ref|ZP_11830883.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416713658|ref|ZP_11837213.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416720143|ref|ZP_11841909.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416721579|ref|ZP_11842744.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416733935|ref|ZP_11850730.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|416738171|ref|ZP_11853199.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|416751876|ref|ZP_11860277.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|416759752|ref|ZP_11864577.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416760407|ref|ZP_11864800.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|418484888|ref|ZP_13053878.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418486676|ref|ZP_13055625.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035278]
gi|418496961|ref|ZP_13063386.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035318]
gi|418500325|ref|ZP_13066723.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035320]
gi|418503299|ref|ZP_13069664.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035321]
gi|418509324|ref|ZP_13075620.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035327]
gi|418528001|ref|ZP_13093954.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008286]
gi|322615214|gb|EFY12136.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322617805|gb|EFY14701.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624602|gb|EFY21433.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626948|gb|EFY23744.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322634134|gb|EFY30870.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635675|gb|EFY32385.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322640190|gb|EFY36854.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646387|gb|EFY42899.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649354|gb|EFY45790.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322656475|gb|EFY52764.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322665661|gb|EFY61845.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667185|gb|EFY63352.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671191|gb|EFY67319.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675169|gb|EFY71246.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680777|gb|EFY76812.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686952|gb|EFY82929.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323192716|gb|EFZ77943.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198852|gb|EFZ83951.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323205138|gb|EFZ90116.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323213535|gb|EFZ98326.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323215794|gb|EGA00537.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221293|gb|EGA05716.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323223841|gb|EGA08144.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323231240|gb|EGA15355.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233674|gb|EGA17766.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237744|gb|EGA21804.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323245727|gb|EGA29721.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246535|gb|EGA30514.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323253020|gb|EGA36853.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323254772|gb|EGA38575.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323259528|gb|EGA43163.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323268311|gb|EGA51786.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|366055964|gb|EHN20297.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035318]
gi|366057192|gb|EHN21496.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366069178|gb|EHN33304.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035320]
gi|366072975|gb|EHN37055.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035278]
gi|366073141|gb|EHN37216.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035321]
gi|366078514|gb|EHN42515.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035327]
gi|366827204|gb|EHN54113.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|372204125|gb|EHP17656.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008286]
Length = 411
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 207/357 (57%), Gaps = 15/357 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PN F + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNSFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQL--RMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR--MQQEAIQQRKAVRKG 400
+V+ + L ++ F+S+++ G + EL R + I Q K V G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIGLANGNIIPAEELDRSYIVYPRINQEKCVGCG 348
>gi|387894481|ref|YP_006324778.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas fluorescens A506]
gi|387161565|gb|AFJ56764.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas fluorescens A506]
Length = 424
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 199/329 (60%), Gaps = 10/329 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G NIELI+DR LE L+E Q+K +PD+ LI S+M +A+W
Sbjct: 62 -----AHYGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEASW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KNILPLVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAYRGGADAVSLINTINSITSVDLERMVALPVVGTQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ ++ + GIGG+ T DAAEF+ LG VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQT----NGLPICGIGGIGTWRDAAEFVALGCGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+V+ + + L +M ++++ F G ++
Sbjct: 293 IVEEMKDGLSRWMDSQGHANLQAFSGRAV 321
>gi|398975539|ref|ZP_10685648.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM25]
gi|398140216|gb|EJM29188.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM25]
Length = 424
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 210/352 (59%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGNNREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVDLEHMVALPTVGSKSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ + GIGG+ + DAAEFI LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPICGIGGIGSWRDAAEFIALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V + + L +M ++SI +F G ++ +Y + +++ ++ QEA
Sbjct: 293 IVDEMKDGLSRWMGSQGYASIAEFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|421883593|ref|ZP_16314822.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|379986819|emb|CCF87095.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
Length = 411
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 141/326 (43%), Positives = 197/326 (60%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ LE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHLLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIALRFIQQLR--MHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + L ++ F+S+++ G
Sbjct: 292 IVEDMASGLSHYLADQGFASLQEMIG 317
>gi|417327486|ref|ZP_12112891.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
gi|353570493|gb|EHC34745.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
Length = 424
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 142/337 (42%), Positives = 198/337 (58%), Gaps = 22/337 (6%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVI------- 98
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ I
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFANPPAIGRKTIGF 64
Query: 99 ----NVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIA 154
V+PR+ L G IG++N+E I++ PLE L ++LK YPDK+LIA
Sbjct: 65 FIANEVSPRFDHLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIA 119
Query: 155 SIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWIN 214
SIM E N+ W+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C +
Sbjct: 120 SIMGE-NEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVK 177
Query: 215 AKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYS 274
+++P+ AKMTPNI D+ E A A R G++G++ INT+ S+ IDL P V G S
Sbjct: 178 RGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKS 237
Query: 275 TPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQ 334
+ GYS KAV PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+Q
Sbjct: 238 SISGYSGKAVKPIALRFIQQL--RMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQ 293
Query: 335 VCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
V TG+M +GY +V+ + L ++ F+S+++ G
Sbjct: 294 VTTGIMQYGYRIVEDMASGLSHYLADQGFASLQEMIG 330
>gi|330810232|ref|YP_004354694.1| dihydropyrimidine dehydrogenase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423697879|ref|ZP_17672369.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas fluorescens Q8r1-96]
gi|327378340|gb|AEA69690.1| putative dihydropyrimidine dehydrogenase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|388004768|gb|EIK66035.1| dihydroorotate dehydrogenase family/4Fe-4S binding domain protein
[Pseudomonas fluorescens Q8r1-96]
Length = 424
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 144/329 (43%), Positives = 199/329 (60%), Gaps = 10/329 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KRILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVDLDRMVALPSVGSQSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ + GIGG+ + DAAEFI LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPICGIGGIGSWRDAAEFIALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+V+ + + L +M ++++ F G ++
Sbjct: 293 IVEEMKDGLSRWMDSQGHANLQAFSGRAV 321
>gi|389577656|ref|ZP_10167684.1| dihydroorotate dehydrogenase family protein [Eubacterium
cellulosolvens 6]
gi|389313141|gb|EIM58074.1| dihydroorotate dehydrogenase family protein [Eubacterium
cellulosolvens 6]
Length = 520
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 203/357 (56%), Gaps = 15/357 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ G++ NPF++ S G+NY ++ RAFD GW V KT+ V+PR+A
Sbjct: 122 DLSVEFLGVKFENPFLLSSSVVGSNYEMVARAFDMGWAGVAFKTIGFFVPD--EVSPRFA 179
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L+ N +G++N+E ISD LE L F+QLK YP KI+IASIM + W
Sbjct: 180 TLKKEGN-----PFVGFKNLEQISDHSLEENLAFFRQLKKDYPTKIIIASIMGR-TEEEW 233
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+L EE G D IE NFSCP M +G VG + L+E + +PV AKM
Sbjct: 234 TKLAALCEEAGADMIECNFSCPQ-MVGEGLGCEVGINNELVETYTRAVRKGTKLPVLAKM 292
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT + EPA+ ALR G++G++AINTI S+M ++ +T P V G S+ GYS KAV
Sbjct: 293 TPNITKMEEPAKAALRGGADGIAAINTIKSIMNVNFETYATAPSVAGRSSVSGYSGKAVK 352
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +K + KD +SG+GG+ET DAAEFI LG TVQV T VM +GY
Sbjct: 353 PIALRFIHD----LKKDPELKDVPVSGMGGIETWKDAAEFIALGCGTVQVTTAVMQYGYR 408
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR--MQQEAIQQRKAVRKG 400
+++ + E L D+M H + D G ++E +L R +Q A +++ V G
Sbjct: 409 IIEDMIEGLSDYMISHGIGHVSDLMGRALETIVAADDLNRSTIQFPAFNRKECVGCG 465
>gi|114769062|ref|ZP_01446688.1| dihydropyrimidine dehydrogenase [Rhodobacterales bacterium
HTCC2255]
gi|114549979|gb|EAU52860.1| dihydropyrimidine dehydrogenase [Rhodobacterales bacterium
HTCC2255]
Length = 434
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 142/358 (39%), Positives = 206/358 (57%), Gaps = 12/358 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL+ G++ PNPF + S PP ++RAF+ GWG VV KT+ + ++NV PRY
Sbjct: 3 DLTSNFIGIKSPNPFWLASAPPTDKEYNVRRAFEAGWGGVVWKTLGSEGPPIVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
G A +++G NIELI+DR L L E K++K YPD+ +I SIM + A
Sbjct: 63 -----GVVHGADRRVLGLNNIELITDRDLFKNLDEIKRVKKDYPDRAIIVSIMVPCEEDA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V GW + PV K
Sbjct: 118 WKTILPLVEETGADGIELNFGCPHGMAERGMGSAVGQVPEYVEMVTGWCKKYYSKPVIVK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNI+DI +PA A G++ VS INTI S++ +DL + P P ++G T GGY AV
Sbjct: 178 LTPNISDIRKPAAAAQAGGADAVSLINTISSIISVDLDVMAPNPTIDGKGTHGGYCGPAV 237
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V IA+ ++ + +SGIGG+ + DAAE+++LG VQVCT M +G+
Sbjct: 238 KPIAMNMVAEIARNPET----ANLPISGIGGITSWRDAAEYMVLGCGNVQVCTAAMTYGF 293
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + L +M + S E+F ++ T + L + + +I Q + G
Sbjct: 294 KIVQEMISGLSQWMDEKGYESTEEFVRQAVPNVTDWQYLNLNYVSKASINQDDYISCG 351
>gi|398852176|ref|ZP_10608844.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM80]
gi|398244824|gb|EJN30359.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM80]
Length = 424
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 200/329 (60%), Gaps = 10/329 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ +++G NIELI+DR LE L+E Q+K +PD+ +I S+M + +W
Sbjct: 62 -----AHYGNNREVLGINNIELITDRSLEINLREITQVKKDWPDRAIIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVDLEHMVALPTVGSKSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ + GIGG+ + DAAEF+ LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPICGIGGIGSWRDAAEFMALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+V+ + + L +M ++SI +F G ++
Sbjct: 293 IVEEMKDGLSRWMDSQGYASISEFSGRAV 321
>gi|398991513|ref|ZP_10694639.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM24]
gi|399016102|ref|ZP_10718348.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM16]
gi|398106525|gb|EJL96554.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM16]
gi|398139105|gb|EJM28107.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM24]
Length = 424
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 147/352 (41%), Positives = 211/352 (59%), Gaps = 17/352 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGNNREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVDLEHMVALPTVGSKSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ + GIGG+ + DAAEF+ LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPETQ----GLPICGIGGIGSWRDAAEFMALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI------EYFTTHTELV-RMQQEA 390
+V+ + + L +M +++I +F G ++ +Y + +++ ++ QEA
Sbjct: 293 IVEEMKDGLSRWMDSQGYANIAEFSGRAVGNTTDWKYLDINYQVIAKIDQEA 344
>gi|415778183|ref|ZP_11489229.1| uncharacterized protein yeiA [Escherichia coli 3431]
gi|425312076|ref|ZP_18701278.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1735]
gi|425348779|ref|ZP_18735278.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1849]
gi|429015248|ref|ZP_19082169.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 95.0943]
gi|315615386|gb|EFU96018.1| uncharacterized protein yeiA [Escherichia coli 3431]
gi|408227644|gb|EKI51226.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1735]
gi|408265646|gb|EKI86328.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli EC1849]
gi|427262224|gb|EKW28125.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 95.0943]
Length = 399
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 192/318 (60%), Gaps = 13/318 (4%)
Query: 54 LQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANG 113
++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+ L G
Sbjct: 1 MKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFDHLVKEDTG 58
Query: 114 SAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVE 173
IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ WEEL V+
Sbjct: 59 -----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQWEELARLVQ 112
Query: 174 ETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDIT 233
E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKMTPNI D+
Sbjct: 113 EAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMC 171
Query: 234 EPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVM 293
E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV PIAL
Sbjct: 172 EVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIAL---- 227
Query: 294 SIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEE 353
+ M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY +V+ +
Sbjct: 228 RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASG 287
Query: 354 LKDFMKMHNFSSIEDFRG 371
L ++ F S+++ G
Sbjct: 288 LSHYLADQGFDSLQEMVG 305
>gi|398966112|ref|ZP_10681368.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM30]
gi|398146509|gb|EJM35251.1| dihydroorotate dehydrogenase family protein [Pseudomonas sp. GM30]
Length = 424
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 200/329 (60%), Gaps = 10/329 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGNNREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVDLEHMVALPTVGSKSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ + GIGG+ + DAAEF+ LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPICGIGGIGSWRDAAEFMALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+V+ + + L +M +++I +F G ++
Sbjct: 293 IVEEMKDGLSRWMDSQGYANIAEFSGRAV 321
>gi|424922687|ref|ZP_18346048.1| dihydroorotate dehydrogenase [Pseudomonas fluorescens R124]
gi|404303847|gb|EJZ57809.1| dihydroorotate dehydrogenase [Pseudomonas fluorescens R124]
Length = 424
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 200/329 (60%), Gaps = 10/329 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ +++G NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHYGNNREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVDLEHMVALPTVGSKSTHGGYCGSAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V IA+ +++ + GIGG+ + DAAEF+ LG+ VQVCT M+HG+
Sbjct: 237 PIALNMVAEIARDPQTQ----GLPICGIGGIGSWRDAAEFMALGSGAVQVCTAAMLHGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+V+ + + L +M +++I +F G ++
Sbjct: 293 IVEEMKDGLSRWMDSQGYANIAEFSGRAV 321
>gi|118776473|gb|ABL14244.1| dihydroprimidine dehydrogenase [Bacillus fordii]
Length = 426
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 138/339 (40%), Positives = 195/339 (57%), Gaps = 15/339 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+SI G++ PNP + PP ++RAF+ GWG V KT+ ++NVT R+A
Sbjct: 3 DISIQFAGIKSPNPHWLAPAPPTNTGYQVQRAFEAGWGGAVWKTL---GEPILNVTSRFA 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ ++ G+ NIELISDRP+E LKE + K +PD +IAS+M E + W
Sbjct: 60 -----AHHFNGRRVAGFNNIELISDRPIEDNLKEIYETKKRFPDHPIIASLMVEPKREKW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ RV++ G+D E+N CPHGM ER MG+AVGQ L+E+ + + VPV K+
Sbjct: 115 HEIVKRVQDVGVDGFELNLGCPHGMSERGMGSAVGQHPDLVEKTTLYAKEASEVPVITKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVM-GIDLKTLRPEPCVEGYSTPGGYSCKAV 284
TPNITDIT AR A R G++ +S INTI S+M I + +R + G GGYS AV
Sbjct: 175 TPNITDITATARAAQRGGADAISMINTINSLMESIWIHGIRSR-MINGLGAHGGYSGPAV 233
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL + A+ D +SGIGGV T D EF+L+GA VQ+CT M HG+
Sbjct: 234 KPIALNMIGECARQ-----KDITIPISGIGGVSTWQDTVEFMLMGAGGVQICTAAMHHGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
++ L E L + + +S+ + GAS+E +T + L
Sbjct: 289 SIIDDLTEGLSNHLDEKGIASVSEIIGASVEKYTDWSNL 327
>gi|417391890|ref|ZP_12154909.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
gi|353613886|gb|EHC65875.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
Length = 423
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 143/336 (42%), Positives = 202/336 (60%), Gaps = 21/336 (6%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVS-LDAAK-------- 96
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ L+ A
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFLNKATPGVAIGFF 64
Query: 97 VIN-VTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIAS 155
+ N V+PR+ L G IG++N+E I++ PLE L ++LK YP+K+LIAS
Sbjct: 65 IANEVSPRFDHLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPNKVLIAS 119
Query: 156 IMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINA 215
IM E N+ W+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C +
Sbjct: 120 IMGE-NEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKR 177
Query: 216 KATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYST 275
+++P+ AKMTPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+
Sbjct: 178 GSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSS 237
Query: 276 PGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQV 335
GYS KAV PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV
Sbjct: 238 ISGYSGKAVKPIALRFIQQL--RMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQV 293
Query: 336 CTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
TG+M +GY +V+ + L ++ F+S+++ G
Sbjct: 294 TTGIMQYGYRIVEDMASGLSHYLADQGFASLQEMIG 329
>gi|395646708|ref|ZP_10434568.1| dihydroorotate dehydrogenase family protein [Methanofollis
liminatans DSM 4140]
gi|395443448|gb|EJG08205.1| dihydroorotate dehydrogenase family protein [Methanofollis
liminatans DSM 4140]
Length = 400
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 194/339 (57%), Gaps = 12/339 (3%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L TV L + NPF++ SGPP + ++ AF GWG V KT+ D+ ++ +V+PR+A
Sbjct: 8 LKTTVGTLSLDNPFILASGPPTASGDQIRHAFRLGWGGAVTKTIVPDSMEITDVSPRFAA 67
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
+ G ++G+ENIEL+S R L E +K YPD++LIASIM + A W
Sbjct: 68 WKGEDTG-----LLGFENIELLSKRDLACWTGEIAAIKKEYPDRVLIASIMASPDPAEWR 122
Query: 167 ELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMT 226
+L V + G DA+E+N SCPHGMPER +GAA+GQ L+ V + VP+ K+T
Sbjct: 123 DLASAVVDAGADAVELNVSCPHGMPERGVGAALGQHPHLVRGVTHAVRDAVEVPLVVKLT 182
Query: 227 PNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHP 286
PN+TDI A A+ G++ ++AINT+ +MGIDL TL P P V G T GGYS AV P
Sbjct: 183 PNVTDILPVAEAAVAGGADILAAINTVQCLMGIDLDTLEPLPSVAGAGTYGGYSGPAVKP 242
Query: 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGL 346
I L V IA+ + + G+GGV DAAE+I +GA+ VQVCT VM G G+
Sbjct: 243 IGLRIVSQIARELP-------VPIMGVGGVSRWQDAAEYIAVGASAVQVCTAVMWRGAGI 295
Query: 347 VKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
V+ + E L ++ S RG ++ TH L R
Sbjct: 296 VRGMNEGLAGYLAERGLSGPGALRGLALPRIGTHEALSR 334
>gi|386723224|ref|YP_006189550.1| dihydropyrimidine dehydrogenase subunit B [Paenibacillus
mucilaginosus K02]
gi|384090349|gb|AFH61785.1| dihydropyrimidine dehydrogenase subunit B [Paenibacillus
mucilaginosus K02]
Length = 433
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/333 (42%), Positives = 196/333 (58%), Gaps = 13/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI + G++ PNPF + S PP ++RAF+ GWG V KT+ +IN + R+A
Sbjct: 3 DLSINLAGIESPNPFWLASAPPTNTGYQVQRAFEAGWGGAVWKTL---GDPIINTSARFA 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ G ++ G+ NIELI+DRPLE L+E + K +P +IAS+M E + W
Sbjct: 60 AVHFGGR-----RVAGFNNIELITDRPLEVNLREIAETKKRFPGHAIIASLMVEPKREKW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ RVEE G+D +E+NF CPHGM ER MGAA GQ L+E W+ A PV K+
Sbjct: 115 HEIVKRVEEVGVDGLELNFGCPHGMAERGMGAASGQQPDLVEAQTMWVKEAARTPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDIT A A+R G++ VS INTI S+ G+DL T P V G T GGY AV
Sbjct: 175 TPNITDITATAAAAVRGGADAVSLINTINSLAGVDLDTWNTVPHVGGRGTHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V A+ + +SGIGG+ DA EF+L+GA VQ+CT VM HG+
Sbjct: 235 PIALNMVAECARNPQV-----GVPISGIGGISDWRDAVEFMLMGATGVQMCTAVMHHGFR 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
++ L E L D++ +S+ + G S+E ++
Sbjct: 290 IIHELVEGLNDYLDDKGVASVSELVGRSVERYS 322
>gi|188590495|ref|YP_001921441.1| dihydropyrimidine dehydrogenase [Clostridium botulinum E3 str.
Alaska E43]
gi|188500776|gb|ACD53912.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
E3 str. Alaska E43]
Length = 412
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 199/340 (58%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G Y + +AF+ GWG V+ KT+ V+PR+
Sbjct: 6 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKAFEAGWGGVMFKTIGFFMPN--EVSPRFD 63
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
LR A +G++N+E ISD PL+ L + ++LK YP KI++ASIM E N+ W
Sbjct: 64 SLRKEAT-----SFVGFKNMEQISDHPLQQNLDDLRRLKENYPTKIVVASIMGE-NEKEW 117
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+L V E G D IE NFSCP M +MG+ VGQ+ L+++ C +P+ AKM
Sbjct: 118 EDLAKLVTEAGADMIECNFSCPQ-MTSHEMGSDVGQNPELVKKYCEATRRGTNLPILAKM 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D++ PA ++ G+ G++ INTI S+ GID+ ++ +P V S+ GYS KAV
Sbjct: 177 TPNIGDMSVPAIASMEGGATGLATINTIKSITGIDINSMTAKPVVNAKSSVSGYSGKAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +AK K K +SGIGG+ET DA EFILLG++ +QV T VM +GY
Sbjct: 237 PIALRFIYELAKNEKL----KGVPISGIGGIETWEDALEFILLGSSNLQVTTSVMQYGYR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+V+ + L FM + F +ED G +I+ +L R
Sbjct: 293 VVEDMISGLSHFMDENGFEKLEDMVGIAIKNIIPAEDLDR 332
>gi|251777769|ref|ZP_04820689.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
E1 str. 'BoNT E Beluga']
gi|243082084|gb|EES47974.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
E1 str. 'BoNT E Beluga']
Length = 412
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 199/340 (58%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G Y + +AF+ GWG V+ KT+ V+PR+
Sbjct: 6 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKAFEAGWGGVMFKTIGFFMPN--EVSPRFD 63
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
LR A +G++N+E ISD PL+ L + ++LK YP KI++ASIM E N+ W
Sbjct: 64 SLRKEAT-----SFVGFKNMEQISDHPLQQNLDDLRRLKENYPTKIVVASIMGE-NEKEW 117
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+L V E G D IE NFSCP M +MG+ VGQ+ L+++ C +P+ AKM
Sbjct: 118 EDLAKLVTEAGADMIECNFSCPQ-MTSHEMGSDVGQNPELVKKYCEATRRGTNLPILAKM 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D++ PA ++ G+ G++ INTI S+ GID+ ++ +P V S+ GYS KAV
Sbjct: 177 TPNIGDMSVPAIASMEGGATGLATINTIKSITGIDINSMTAKPVVNAKSSVSGYSGKAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +AK K K +SGIGG+ET DA EFILLG++ +QV T VM +GY
Sbjct: 237 PIALRFIYELAKNEKL----KGVPISGIGGIETWEDALEFILLGSSNLQVTTSVMQYGYR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+V+ + L FM + F +ED G +I+ +L R
Sbjct: 293 VVEDMISGLSHFMDENGFEKLEDMVGIAIKNIIPAEDLDR 332
>gi|328542363|ref|YP_004302472.1| dihydroorotate dehydrogenase [Polymorphum gilvum SL003B-26A1]
gi|326412110|gb|ADZ69173.1| Dihydroorotate dehydrogenase family protein [Polymorphum gilvum
SL003B-26A1]
Length = 434
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 203/358 (56%), Gaps = 15/358 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP + RAF GWG VV KT+ ++NV PRY
Sbjct: 3 DLRSEFAGIKSPNPFWLASAPPTDKEYNVVRAFKAGWGGVVWKTL---GDPIVNVNGPRY 59
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA Q+IG NIELI+DRPLE L+E K++K + D+ L+ S+M +
Sbjct: 60 -----GAIHGKDRQLIGLNNIELITDRPLEVNLQEIKRVKRDWKDRALVVSLMVPCEEHY 114
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ +VE+T D +E+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 115 WQTILKQVEDTEADGVELNFGCPHGMSERGMGSAVGQVPEYIEMVTRWCKQHTRMPVIVK 174
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI +PAR A G++ VS INTI S++ +DL + P P ++G GGY AV
Sbjct: 175 LTPNITDIRKPARAARAGGADAVSLINTINSIVSVDLDRMCPSPTIDGKGAHGGYCGPAV 234
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA+ + +SGIGGV T DAAEF+ LGA VQVCT M +G+
Sbjct: 235 KPIALNMVAEIAR----DPETAGLPISGIGGVTTWRDAAEFMALGAGNVQVCTAAMTYGF 290
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+V+ + E LKD+M S + +F G ++ + H L + + I Q ++ G
Sbjct: 291 KIVEDMIEGLKDWMDGAGHSGVSEFVGRAVPNCSDWQHLNLNYIAKAKIDQDLCIKCG 348
>gi|187935649|ref|YP_001886506.1| dihydropyrimidine dehydrogenase [Clostridium botulinum B str.
Eklund 17B]
gi|187723802|gb|ACD25023.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
B str. Eklund 17B]
Length = 412
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 199/340 (58%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G Y + +AF+ GWG V+ KT+ V+PR+
Sbjct: 6 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKAFEAGWGGVMFKTIGFFMPN--EVSPRFD 63
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
LR A +G++N+E ISD PL+ L + ++LK YP KI++ASIM E N+ W
Sbjct: 64 SLRKEAT-----SFVGFKNMEQISDHPLQQNLDDLRRLKENYPTKIVVASIMGE-NEKEW 117
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+L V E G D IE NFSCP M +MG+ VGQ+ L+++ C +P+ AKM
Sbjct: 118 EDLAKLVTEAGADMIECNFSCPQ-MTSHEMGSDVGQNPELVKKYCEATRRGTNLPILAKM 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D++ PA ++ G+ G++ INTI S+ GID+ ++ +P V S+ GYS KAV
Sbjct: 177 TPNIGDMSVPAIASMEGGATGLATINTIKSITGIDINSMTAKPVVNAKSSVSGYSGKAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +AK K K +SGIGG+ET DA EFILLG++ +QV T VM +GY
Sbjct: 237 PIALRFIYELAKNEKL----KGVPISGIGGIETWEDALEFILLGSSNLQVTTSVMQYGYR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+V+ + L FM + F +ED G +I+ +L R
Sbjct: 293 VVEDMISGLSHFMDENGFEKLEDMVGIAIKNIIPAEDLDR 332
>gi|440286905|ref|YP_007339670.1| dihydroorotate dehydrogenase family protein [Enterobacteriaceae
bacterium strain FGI 57]
gi|440046427|gb|AGB77485.1| dihydroorotate dehydrogenase family protein [Enterobacteriaceae
bacterium strain FGI 57]
Length = 411
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 198/340 (58%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PL L ++LK YPD +LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLAENLDAIRRLKEDYPDNVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
++L VE+ G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QDLAHLVEKAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ + A A G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCDVALAAKHGGADGIAAINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + M+ +++ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY
Sbjct: 236 PIAL----RFIQQMRMHPELRNFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+++ + L ++ F SI++ G + EL R
Sbjct: 292 IMEDMISGLSHYLADQGFDSIDEMLGLANTNIVPAEELDR 331
>gi|337746744|ref|YP_004640906.1| dihydroorotate dehydrogenase family protein [Paenibacillus
mucilaginosus KNP414]
gi|336297933|gb|AEI41036.1| dihydroorotate dehydrogenase family protein [Paenibacillus
mucilaginosus KNP414]
Length = 433
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 194/333 (58%), Gaps = 13/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL I + G++ PNPF + S PP ++RAF+ GWG V KT+ +IN + R+A
Sbjct: 3 DLRINLAGIESPNPFWLASAPPTNTGYQVQRAFEAGWGGAVWKTL---GDPIINTSARFA 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ G ++ G+ NIELI+DRPLE L+E + K +P +IAS+M E + W
Sbjct: 60 AVHFGGR-----RVAGFNNIELITDRPLEVNLREIAETKKRFPGHAIIASLMVEPKREKW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ RVEE G+D +E+NF CPHGM ER MGAA GQ L+E W+ A PV K+
Sbjct: 115 HEIVKRVEEVGVDGLELNFGCPHGMAERGMGAASGQQPDLVEAQTMWVKEAARTPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDIT A A+R G++ VS INTI S+ G+DL T P V G T GGY AV
Sbjct: 175 TPNITDITATAAAAVRGGADAVSLINTINSLAGVDLDTWNTVPHVGGRGTHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V A+ + +SGIGG+ DA EF+L+GA VQ+CT VM HG+
Sbjct: 235 PIALNMVAECARNPQV-----GVPISGIGGISDWRDAVEFMLMGATGVQMCTAVMHHGFR 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
++ L E L D++ + + + G S+E ++
Sbjct: 290 IIHELVEGLNDYLDDKGIAGVSELVGRSVERYS 322
>gi|427774707|ref|ZP_18967136.1| dihydropyrimidine dehydrogenase subunit B, partial [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm5]
gi|414064728|gb|EKT45605.1| dihydropyrimidine dehydrogenase subunit B, partial [Salmonella
enterica subsp. enterica serovar Typhimurium str. STm5]
Length = 289
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/298 (45%), Positives = 183/298 (61%), Gaps = 13/298 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +G
Sbjct: 236 PIALRFIQQLR--MHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYG 289
>gi|379720628|ref|YP_005312759.1| dihydroorotate dehydrogenase family protein [Paenibacillus
mucilaginosus 3016]
gi|378569300|gb|AFC29610.1| dihydroorotate dehydrogenase family protein [Paenibacillus
mucilaginosus 3016]
Length = 433
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 194/333 (58%), Gaps = 13/333 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL I + G++ PNPF + S PP ++RAF+ GWG V KT+ +IN + R+A
Sbjct: 3 DLRINLAGIESPNPFWLASAPPTNTGYQVQRAFEAGWGGAVWKTL---GDPIINTSARFA 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ G ++ G NIELI+DRPLE L+E + K +P +IAS+M E + W
Sbjct: 60 AVHFGGR-----RVAGLNNIELITDRPLEVNLREIAETKKRFPGHAIIASLMVEPKREKW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E++ RVEE G+D +E+NF CPHGM ER MGAA GQ L+E W+ A PV K+
Sbjct: 115 HEIVKRVEEVGVDGLELNFGCPHGMAERGMGAASGQQPDLVEAQTMWVKEAARTPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDIT A A+R G++ VS INTI S+ G+DL + P V G T GGY AV
Sbjct: 175 TPNITDITATAAAAVRGGADAVSLINTINSLAGVDLDSWNTVPHVGGRGTHGGYCGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL V A+ + +SGIGG+ DA EF+L+GA VQ+CT VM HG+
Sbjct: 235 PIALNMVAECARNPQV-----GVPISGIGGISDWRDAVEFMLMGATGVQMCTAVMHHGFR 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT 378
++ L E L D++ +S+ + G S+E ++
Sbjct: 290 IIHELVEGLNDYLDDKGIASVSELVGRSVERYS 322
>gi|406911574|gb|EKD51341.1| dihydropyrimidine dehydrogenase [uncultured bacterium]
Length = 398
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 193/333 (57%), Gaps = 17/333 (5%)
Query: 50 TVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRA 109
T GL + NPF++ +GPP + ++ RAFD GWG V KT+ LD+ + ++ +PR LR
Sbjct: 4 TFCGLTLQNPFMLAAGPPTASGAMISRAFDRGWGGAVTKTIFLDSERTLSPSPRLQVLRT 63
Query: 110 GANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA-WEEL 168
+ S I G+ NIE+ S RPL + + L++ YP+ +L+ SI K W+E+
Sbjct: 64 --HSSRTSPIYGFRNIEMGSTRPLSLWENDIRDLRSKYPNNLLLTSIGSVCGKRENWQEI 121
Query: 169 IDRVEETGIDAIEVNFSCPHG----MPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
R +++G A+E+N SCPHG MP G A+GQD + GW+ + AT+PV K
Sbjct: 122 AKRCQDSGAQALEINVSCPHGGATHMPP---GMAIGQDPDTTARITGWVKSVATIPVIVK 178
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN+ DI A +G++ +SAINT+ S+ GI+L T P+P V YST GG S A+
Sbjct: 179 LTPNVADIVSVGIAAQNAGADAISAINTVQSIAGINLDTFTPQPSVGLYSTAGGLSGLAI 238
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
HP+AL V +A+ + L GIGGV A EFI LGA+ VQ+CT VM++GY
Sbjct: 239 HPMALNAVARLAQGV-------GLPLIGIGGVSDWRSAIEFIALGASLVQICTAVMINGY 291
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYF 377
G++ +L E L +++ + I + RG ++
Sbjct: 292 GIIDQLKEGLATYLRNKSLKDILEIRGRALAQL 324
>gi|195130537|ref|XP_002009708.1| GI15089 [Drosophila mojavensis]
gi|193908158|gb|EDW07025.1| GI15089 [Drosophila mojavensis]
Length = 1035
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 137/339 (40%), Positives = 199/339 (58%), Gaps = 11/339 (3%)
Query: 24 GLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWG 83
GL L + L + +D S D+S+ + GL+ NPF + S PP T+ +++R+F++GWG
Sbjct: 508 GLPLDTPAALPLFYTDIDSV--DISVEMCGLKFENPFGLASAPPTTSAAMIRRSFEQGWG 565
Query: 84 AVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-WENIELISDRPLETMLKEFKQ 142
VV KT LD V NV+PR +R +G G G + NIELIS++ E L+ +
Sbjct: 566 FVVTKTFGLDKDMVTNVSPRI--VRGTTSGYRYGPQQGCFLNIELISEKRAEYWLRSIGE 623
Query: 143 LKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQD 202
LK +P+KI+IASIM YN+A W EL R E++G DA+E+N SCPHGM E MG A GQ+
Sbjct: 624 LKRDFPEKIIIASIMCGYNEADWTELATRAEQSGADALELNLSCPHGMGESGMGLACGQE 683
Query: 203 CRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK 262
RL+E++ W+ +P + K+TPNITDI A+ A R G+ G SAINT+ +M +
Sbjct: 684 PRLVEDISRWVRKAVKIPFFIKLTPNITDIVSIAKAAHRGGANGGSAINTVQGLMSLKAD 743
Query: 263 -TLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGD 321
T P E +T GG S A P+AL + IA+ + KD+ + GIGG+++G
Sbjct: 744 GTAWPAIGKEQRTTYGGVSGNATRPMALRAISEIARALP-----KDFVILGIGGIDSGEV 798
Query: 322 AAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKM 360
A +FI GA +QVC+ V + L++ C LK + +
Sbjct: 799 ALQFIQAGATVLQVCSSVQNQDFTLIEDYCTSLKALLYL 837
>gi|153955017|ref|YP_001395782.1| dihydropyrimidine dehydrogenase [Clostridium kluyveri DSM 555]
gi|219855458|ref|YP_002472580.1| hypothetical protein CKR_2115 [Clostridium kluyveri NBRC 12016]
gi|146347875|gb|EDK34411.1| PyrD1 [Clostridium kluyveri DSM 555]
gi|219569182|dbj|BAH07166.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 401
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 195/340 (57%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S G N+ + +A D GW VV KT+ V+PR+
Sbjct: 3 DLSIEFCGIKCENPFFLSSSVVGNNFEMCSKALDMGWAGVVFKTIGFYIPN--EVSPRFD 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ G +G+ N+E ISD PLE L+ ++LK YP K+L+ASIM E + W
Sbjct: 61 II-----GKENAPFVGFRNLEQISDHPLEENLEHMRKLKQKYPQKVLVASIMGE-TEEEW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+L + V + G D IE NFSCP M + MGA VGQ L+E C + ++P+ AKM
Sbjct: 115 TKLAEMVTQIGADIIECNFSCPQ-MSLQSMGADVGQSPELVENYCRAVRKGTSLPILAKM 173
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN++D+T PA ++R G++G++AINTI S+ +DL P P + G S+ GYS KA+
Sbjct: 174 TPNLSDMTIPAAASIRGGADGIAAINTIKSITRVDLNKFSPYPIIGGKSSVSGYSGKAIK 233
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +AK K K +SG+GG+E D EF+LLGA+ +QV T +M +GY
Sbjct: 234 PIALRFIQDLAKSPKL----KGIPISGMGGIENWEDVLEFMLLGASNIQVTTAIMQYGYR 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
++K L L +M+ F+ +ED G +++ EL R
Sbjct: 290 IIKDLISGLSYYMEEKGFNMLEDLVGFALKNVVPADELDR 329
>gi|170760141|ref|YP_001788137.1| dihydropyrimidine dehydrogenase [Clostridium botulinum A3 str. Loch
Maree]
gi|169407130|gb|ACA55541.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
A3 str. Loch Maree]
Length = 411
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/326 (41%), Positives = 190/326 (58%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G Y + +A + GWG +V KTV A V+PR+
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALETGWGGIVFKTVGFFIAN--EVSPRFT 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L +G++N+E I++ LE LK ++LK YP+K+L+ASIM + N+ W
Sbjct: 63 NLEKEGT-----PFLGFKNMEQIAEHSLEENLKAMRKLKENYPNKVLVASIMGQ-NEKEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V E G D IE NFSCP M MG+ VGQ+ +L+++ C + +P+ AKM
Sbjct: 117 EELAKLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYCEAVRRGTDIPILAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D++ PA ++ G+ G++ INTI + G+DL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMSVPAIASIEGGATGIATINTIKCITGVDLDKFIGYPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + ++ KD +SGIGG+ET DAAEFILLG+ +QV T VM +GY
Sbjct: 236 PIAL----RFIQQLVTDERLKDVPISGIGGIETWEDAAEFILLGSRNLQVTTAVMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + E L +MK F +ED G
Sbjct: 292 IVEDMIEGLSYYMKEKGFEKLEDMVG 317
>gi|385799346|ref|YP_005835750.1| dihydroorotate oxidase B, catalytic subunit [Halanaerobium
praevalens DSM 2228]
gi|309388710|gb|ADO76590.1| dihydroorotate oxidase B, catalytic subunit [Halanaerobium
praevalens DSM 2228]
Length = 411
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 194/340 (57%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G+NY + +A + GWG +V KT+ A +PR+
Sbjct: 5 DLSIEFCGVKAENPFFLSSSPVGSNYDMCAKALESGWGGIVFKTIGYYIAD--ECSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L+ A +G++N+E ISD+PL L K+LK YP KI+IASIM E N+ W
Sbjct: 63 NLKKEAT-----SFVGFKNMEQISDKPLAENLATIKKLKQDYPHKIIIASIMGE-NEKEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EL + V E G D IE NFSCP M MG+ VGQ+ L+++ ++ +PV AKM
Sbjct: 117 AELAEMVTEAGADLIECNFSCPQ-MTSGAMGSDVGQNPELVKKYSAAVSQVTDLPVIAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI ++ PA A+ G++ +SAINTI S+ IDL P P V G S+ GYS KAV
Sbjct: 176 TPNIGNMEIPAIAAVNGGADALSAINTIKSLTEIDLDDFTPMPKVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +K KD LSG+GG+ET DAAEF+ LG +Q+ T VM +GY
Sbjct: 236 PIALRFIAE----LKQHPQLKDVPLSGMGGIETWEDAAEFLALGCRNLQMTTSVMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+V+ L L +++ F ++E G ++E EL R
Sbjct: 292 IVEDLINGLSHYLEEQGFDNLEQMVGLALEQIVAAEELDR 331
>gi|218695758|ref|YP_002403425.1| dihydropyrimidine dehydrogenase [Escherichia coli 55989]
gi|218352490|emb|CAU98267.1| putative oxidoreductase subunit [Escherichia coli 55989]
Length = 401
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 135/306 (44%), Positives = 184/306 (60%), Gaps = 13/306 (4%)
Query: 66 PPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENI 125
P G Y + +A+D GWG VV KT+ A V+PR+ L G IG++N+
Sbjct: 15 PVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFDHLVKEDTG-----FIGFKNM 67
Query: 126 ELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFS 185
E I++ PLE L +QLK YPDK+LIASIM E N+ WEEL V+E G D IE NFS
Sbjct: 68 EQIAEHPLEENLAALRQLKEDYPDKVLIASIMGE-NEQQWEELARLVQEAGADMIECNFS 126
Query: 186 CPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSE 245
CP M MG+ VGQ L+E+ C + +T+P+ AKMTPNI D+ E A A R G++
Sbjct: 127 CPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGAD 185
Query: 246 GVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFND 305
G++AINT+ S+ IDL P V G S+ GYS KAV PIAL + M++
Sbjct: 186 GIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIAL----RFIQQMRTHPEL 241
Query: 306 KDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSS 365
+D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L ++ F S
Sbjct: 242 RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFDS 301
Query: 366 IEDFRG 371
+++ G
Sbjct: 302 LQEMVG 307
>gi|187778598|ref|ZP_02995071.1| hypothetical protein CLOSPO_02193 [Clostridium sporogenes ATCC
15579]
gi|187772223|gb|EDU36025.1| dihydropyrimidine dehydrogenase [Clostridium sporogenes ATCC 15579]
Length = 411
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 133/326 (40%), Positives = 191/326 (58%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G Y + +A + GWG +V KT+ AK V+PR+
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALETGWGGIVFKTIGFFIAK--EVSPRFT 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L +G++N+E I++ LE L+ K+LK YP+K+L+ASIM + N+ W
Sbjct: 63 NLEKEGT-----PFLGFKNMEQIAEHSLEENLEAMKKLKQNYPNKVLVASIMGQ-NEKEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V E G D IE NFSCP M MG+ VGQ+ +L+++ C + +P+ AKM
Sbjct: 117 EELARLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYCEAVRRGTDIPILAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D++ PA ++ G+ G++ INTI + G+DL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMSVPAIASMEGGATGIATINTIKCITGVDLDKFIGYPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + ++ KD +SGIGG+ET DAAEFILLG+ +QV T +M +GY
Sbjct: 236 PIAL----RFIQQLVTDERLKDIPISGIGGIETWEDAAEFILLGSRNLQVTTAIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + E L +M+ F +ED G
Sbjct: 292 IVEDMIEGLSYYMEEKGFEKLEDMVG 317
>gi|300856746|ref|YP_003781730.1| dihydropyrimidine dehydrogenase [Clostridium ljungdahlii DSM 13528]
gi|300436861|gb|ADK16628.1| dihydropyrimidine dehydrogenase [Clostridium ljungdahlii DSM 13528]
Length = 408
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 133/340 (39%), Positives = 196/340 (57%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S N+ + +A + GW VV KT+ A V+PR+
Sbjct: 3 DLSIEFCGIKCENPFFLSSSVISNNFEMCAKALNMGWAGVVFKTIGFYVAD--EVSPRF- 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A G IG++N+E IS+ PLE L+ +LK + DK+++ASIM E N+ W
Sbjct: 60 ----DAIGKENTPFIGFKNLEQISEHPLEYNLECISKLKREFKDKVIVASIMGE-NEQQW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+L + V + G D IE NFSCP M E MG+ VGQ+ L+E+ C + ++PV AKM
Sbjct: 115 TKLAELVTKAGADIIECNFSCPQ-MAEESMGSDVGQNPELVEKYCKAVRRGTSLPVLAKM 173
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI ++ PA ++ G++G++AINT+ S+ +DL P P + G S GYS KA+
Sbjct: 174 TPNIGNMVIPAEASIHGGADGIAAINTVKSITRVDLDKFSPYPIINGKSAVSGYSGKAIK 233
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +AK K K+ +SGIGG+ET DA EF+LLGA+ +Q+ T VM +GY
Sbjct: 234 PIALRFISDLAKSEKL----KEIPISGIGGIETWEDAVEFLLLGASNIQITTAVMQYGYR 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
++K L L +M+ F ++D G +++ EL R
Sbjct: 290 IIKDLISGLSYYMEDKKFEKVKDLVGLAVKNVVNADELER 329
>gi|451820939|ref|YP_007457140.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451786918|gb|AGF57886.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 500
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 197/342 (57%), Gaps = 17/342 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G+ NPF + S G+NY ++ +AFD GW V KT+ + K V+PR+
Sbjct: 103 DLSIDFCGVHTENPFFLSSSVVGSNYEMVAKAFDMGWAGVAFKTIGMFVPK--EVSPRFT 160
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L +G++NIE ISD LE +K KQLKA YP KI++ASIM + N+ W
Sbjct: 161 ALT-----KENLPFVGFKNIEQISDHTLEENIKFLKQLKADYPTKIIVASIMGQ-NEEEW 214
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+L + E G D IE NFSCPH M +G+ VGQ+ L++ +P+ AKM
Sbjct: 215 TKLAKLMTEAGADIIECNFSCPH-MTGEGLGSDVGQNPELVDLYTKATRKGTHLPILAKM 273
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI ++ PA+ A+ +G+ G++AINTI S+M IDL+ + P VEG S+ GGYS KAV
Sbjct: 274 TPNIGNMEIPAKAAMEAGATGIAAINTIKSIMNIDLENFQSAPNVEGKSSVGGYSGKAVK 333
Query: 286 PIALGKV--MSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
PIAL + M + K + KD +SG+GG+ET DAAEF+ LG +Q+ T VM +G
Sbjct: 334 PIALRFIRDMKVCKEL------KDAPISGMGGIETWADAAEFLALGCENLQITTSVMQYG 387
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
Y +++ L E +K ++ + + + G ++ EL R
Sbjct: 388 YRIIEDLIEGMKLYLSSQGYKRVSEVVGKALPNIVAADELER 429
>gi|291296268|ref|YP_003507666.1| dihydroorotate dehydrogenase family protein [Meiothermus ruber DSM
1279]
gi|290471227|gb|ADD28646.1| dihydroorotate dehydrogenase family protein [Meiothermus ruber DSM
1279]
Length = 461
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/338 (40%), Positives = 199/338 (58%), Gaps = 10/338 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + + RAF+ GWG V KT+ A V+NV+ RY
Sbjct: 3 DLSINFAGIKSPNPFWLASAPPTNSGAQIHRAFEYGWGGAVWKTI---GAPVLNVSNRYG 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
G +++ N+ELISDRPLE L+E + +K +PD+ +I S M E AW
Sbjct: 60 AWHYGGQ-----KMLAINNVELISDRPLEVNLREIRDVKRHWPDRAVIVSAMVESTPEAW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
++I ++E+TG D IE+N+ CPHGM ER MG+AVGQ +++ W+ A +PV K+
Sbjct: 115 RDIILKIEDTGADGIELNYGCPHGMSERGMGSAVGQVPEYCQQITQWVMDVAKIPVIVKL 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+ + PAR AL +G+ +S INTI S++G+DL TL P + G GGY+ AV
Sbjct: 175 TPNVASVVPPARAALAAGANALSLINTINSIIGVDLDTLEITPNIGGKGGHGGYAGPAVK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + S+ + +SG+GG+ T DAAEF+LLGA ++QVCT VM +GY
Sbjct: 235 PIALNLLSSLG--VDPVVKQSGVPISGMGGISTWRDAAEFLLLGATSLQVCTAVMHYGYR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+++ L + L +M F +I D G S+ + +
Sbjct: 293 IIEDLIDGLNAWMDAKGFKTIADVVGKSLPRISDFKDF 330
>gi|195446906|ref|XP_002070975.1| GK25544 [Drosophila willistoni]
gi|194167060|gb|EDW81961.1| GK25544 [Drosophila willistoni]
Length = 1033
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 197/339 (58%), Gaps = 12/339 (3%)
Query: 24 GLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWG 83
GL L + L + +D + DLS+ + GL+ NPF + S PP T+ +++RAF++GWG
Sbjct: 505 GLPLDTPAALPLFHTDIDNV--DLSVEMCGLKFENPFGLASAPPTTSGAMIRRAFEQGWG 562
Query: 84 AVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-WENIELISDRPLETMLKEFKQ 142
VV KT LD V NV+PR +R +G G G + NIELIS++ E L+ +
Sbjct: 563 FVVTKTFGLDKDLVTNVSPRI--VRGTTSGYKYGPQQGCFLNIELISEKRAEYWLRSIAE 620
Query: 143 LKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQD 202
LK +P+KI+IASIM YN+A W+EL E++G DA+E+N SCPHGM ER MG A GQD
Sbjct: 621 LKKDFPEKIIIASIMCSYNEADWKELAQLAEKSGADALELNLSCPHGMGERGMGLACGQD 680
Query: 203 CRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK 262
+L+E++ W+ TVP + K+TPNIT+I A A R G+ G SAINT+ +M +
Sbjct: 681 PKLVEQISRWVREVITVPFFIKLTPNITNIWTIAEAAQRGGASGGSAINTVQGLMSLKAD 740
Query: 263 -TLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGD 321
T P E +T GG S A P+AL + IAK + + + GIGG+++G
Sbjct: 741 ATAWPAIGQEKRTTYGGVSGNATRPMALHAISDIAKRLPG------FPILGIGGIDSGEV 794
Query: 322 AAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKM 360
A +FI GA +Q+C+ V + L+ C L+ + +
Sbjct: 795 ALQFIQAGATVLQICSSVQNQDFTLIDDYCTSLRALLYL 833
>gi|410944933|ref|ZP_11376674.1| dihydropyrimidine dehydrogenase subunit B [Gluconobacter frateurii
NBRC 101659]
Length = 422
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 199/343 (58%), Gaps = 20/343 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL G++ PNPF + S PP ++RAF GWG VV KT+ D A V+N++ RY
Sbjct: 3 DLRTVFAGIKSPNPFWLASAPPTDKEYNVRRAFQAGWGGVVWKTLGEDPA-VVNLSSRY- 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
GA G ++IG NIELISDRPL T + E K++K +PD+ +I S+M + W
Sbjct: 61 ----GALGFEGRRLIGLNNIELISDRPLATNIAEIKRVKREFPDRAVIVSLMVPCEEDKW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ +E V W +PV K+
Sbjct: 117 KAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTRWCKQNTRMPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+T+I PAR A G++ VS INTI SV+G+DL + P P V G T GGY AV
Sbjct: 177 TPNVTNILMPARAARAGGADAVSLINTIQSVIGVDLDAMAPMPVVGGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGG-----DAAEFILLGANTVQVCTGVM 340
PIAL + IA +D +L+GI GG D+AEF+ +GA ++QVCT M
Sbjct: 237 PIALRMIGEIA---------RDPTLAGIPISGIGGISNWRDSAEFLAMGAGSLQVCTAAM 287
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+G+ +V+ + + L ++M + +ED G ++ F +L
Sbjct: 288 HYGFRIVEDMIDGLSNWMDGKGYERLEDVTGRAVSQFVPWNQL 330
>gi|395535413|ref|XP_003769720.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Sarcophilus
harrisii]
Length = 1025
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/334 (38%), Positives = 188/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ PNPF + S PP T+ ++++RAF+ GWG V KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFPNPFGLASAPPSTSASMIRRAFEAGWGFAVTKTFSLDKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD ILIAS+M Y
Sbjct: 592 R------GTTSGPVYGPGQSSFLNIELISEKTAAYWCQSISELKADFPDNILIASLMCTY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL E G DA+E+N SC HGM ER MG A GQD ++ +C WI +P
Sbjct: 646 NKNDWAELSKMAEAAGADALELNLSCSHGMGERGMGLACGQDPDIVRNICRWIRQAVRIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPNITDI AR A G+ GV+A NT++ +MG+ T P V +T G
Sbjct: 706 FFAKLTPNITDIVSVARAAQEGGANGVTATNTVLGLMGLRADATPWPAIGVGKRTTYGSV 765
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S AV PIAL V +IAK + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 766 SGTAVRPIALRAVAAIAKALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 819
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ ++K C LK + + + ++D+ G S
Sbjct: 820 QNQDFTVIKDYCTGLKALLYLKSIEELKDWDGQS 853
>gi|226950228|ref|YP_002805319.1| dihydropyrimidine dehydrogenase [Clostridium botulinum A2 str.
Kyoto]
gi|226840903|gb|ACO83569.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
A2 str. Kyoto]
Length = 411
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/326 (40%), Positives = 190/326 (58%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G Y + +A + GWG +V KTV A V+PR+
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALETGWGGIVFKTVGFFIAN--EVSPRFT 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L +G++N+E I++ LE L+ ++LK YP+K+L+ASIM + N+ W
Sbjct: 63 NLEKEGT-----SFLGFKNMEQIAEHSLEENLEAMRKLKENYPNKVLVASIMGQ-NEKEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V E G D IE NFSCP M MG+ VGQ+ +L+++ C + +P+ AKM
Sbjct: 117 EELAKLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYCEAVRRGTDIPILAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D++ PA ++ G+ G++ INTI + G+DL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMSVPAIASIEGGATGIATINTIKCITGVDLDKFIGYPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + ++ K+ +SGIGG+ET DAAEFILLG+ +QV T VM +GY
Sbjct: 236 PIAL----RFIQQLVTDERLKNVPISGIGGIETWEDAAEFILLGSRNLQVTTAVMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + E L +MK F +ED G
Sbjct: 292 IVEDMIEGLSYYMKEKGFEKLEDMVG 317
>gi|168184462|ref|ZP_02619126.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
Bf]
gi|237796254|ref|YP_002863806.1| dihydropyrimidine dehydrogenase [Clostridium botulinum Ba4 str.
657]
gi|182672460|gb|EDT84421.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
Bf]
gi|229261448|gb|ACQ52481.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
Ba4 str. 657]
Length = 411
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/326 (40%), Positives = 190/326 (58%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G Y + +A + GWG +V KTV A V+PR+
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALETGWGGIVFKTVGFFIAN--EVSPRFT 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L +G++N+E I++ LE L+ ++LK YP+K+L+ASIM + N+ W
Sbjct: 63 NLEKEGT-----SFLGFKNMEQIAEHSLEENLEAMRKLKENYPNKVLVASIMGQ-NEKEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V E G D IE NFSCP M MG+ VGQ+ +L+++ C + +P+ AKM
Sbjct: 117 EELAKLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYCEAVRRGTDIPILAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D++ PA ++ G+ G++ INTI + G+DL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMSVPAIASIEGGATGIATINTIKCITGVDLDKFIGYPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + ++ K+ +SGIGG+ET DAAEFILLG+ +QV T VM +GY
Sbjct: 236 PIAL----RFIQQLVTDEKLKNVPISGIGGIETWEDAAEFILLGSRNLQVTTAVMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + E L +MK F +ED G
Sbjct: 292 IVEDMIEGLSYYMKEKGFKKLEDMVG 317
>gi|189218638|ref|YP_001939279.1| dihydroorotate dehydrogenase fused to Fe-S-cluster domain
[Methylacidiphilum infernorum V4]
gi|189185496|gb|ACD82681.1| Dihydroorotate dehydrogenase fused to Fe-S-cluster domain
[Methylacidiphilum infernorum V4]
Length = 387
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/304 (40%), Positives = 190/304 (62%), Gaps = 10/304 (3%)
Query: 97 VINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI 156
++NV+ RYA + G +I+G N+ELISDRPL LKE +++K L+P++ LI S+
Sbjct: 1 MLNVSNRYAVYKKG------DRILGMNNLELISDRPLSVNLKEIQEVKRLWPNRALIVSM 54
Query: 157 MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK 216
MEEY++ WEEL ++E +G D IE+NF CPHGMPER G+ +GQD EV W+
Sbjct: 55 MEEYDRKKWEELAQKIEGSGADGIELNFGCPHGMPERGTGSKIGQDPARCAEVTSWVRRV 114
Query: 217 ATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTP 276
++P+ K+TPN+TDI+ AR A+ G+ +S INT+ S++G+D+ T P + G S+
Sbjct: 115 TSLPLIVKLTPNVTDISCIARAAIAGGASALSLINTLESILGVDIDTFEVLPSIAGKSSH 174
Query: 277 GGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336
GYS +A+ PIAL +A M E K ++S +GG+ + D EF+LLGA ++Q+C
Sbjct: 175 SGYSGEAIKPIALNLTAKVASM--EEVQKKGLAISAMGGISSWRDGVEFLLLGATSLQLC 232
Query: 337 TGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEA--IQQR 394
T VM+ G+ + + L LK++M+ F SI +FRG S+ + ++L + +E I +
Sbjct: 233 TSVMLKGFRIAEDLLSGLKNWMRSKGFRSIAEFRGKSLSHLVPFSKLDPLFKEVAKINPQ 292
Query: 395 KAVR 398
K +R
Sbjct: 293 KCIR 296
>gi|195393212|ref|XP_002055248.1| GJ18897 [Drosophila virilis]
gi|194149758|gb|EDW65449.1| GJ18897 [Drosophila virilis]
Length = 1031
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 198/339 (58%), Gaps = 12/339 (3%)
Query: 24 GLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWG 83
GL L + L + +D + D+S+ + GL+ NPF + S PP T+ +++RAF++GWG
Sbjct: 508 GLPLDTPAALPLFYTDIDNV--DISVEMCGLKFENPFGLASAPPTTSAAMIRRAFEQGWG 565
Query: 84 AVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-WENIELISDRPLETMLKEFKQ 142
VV KT LD V NV+PR +R +G G G + NIELIS++ E L+ +
Sbjct: 566 FVVTKTFGLDKDMVTNVSPRI--VRGTTSGYRYGPQQGCFLNIELISEKRAEYWLRSIGE 623
Query: 143 LKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQD 202
LK +P+KI+IASIM YN+A W EL + E++G DA+E+N SCPHGM E MG A GQ+
Sbjct: 624 LKRDFPEKIIIASIMCGYNEADWTELAIKAEKSGADALELNLSCPHGMGESGMGLACGQE 683
Query: 203 CRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK 262
+L+E++ W+ VP + K+TPNITDI A+ A R G++G SAINT+ +M +
Sbjct: 684 PKLVEDISRWVRKAVKVPFFIKLTPNITDIVSIAQAAQRGGADGGSAINTVQGLMSLKAD 743
Query: 263 -TLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGD 321
T P E +T GG S A PIAL V IAK + +++ GIGG+++G
Sbjct: 744 ATAWPAVGKEQRTTYGGVSGNATRPIALRAVSEIAKKLPG------FAILGIGGIDSGEV 797
Query: 322 AAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKM 360
A +F+ GA +Q+C+ V + L+ C LK + +
Sbjct: 798 ALQFLQAGATVLQICSSVQNQDFTLIDDYCTSLKALLYL 836
>gi|387819085|ref|YP_005679432.1| dihydropyrimidine dehydrogenase [NADP+] [Clostridium botulinum
H04402 065]
gi|322807129|emb|CBZ04703.1| dihydropyrimidine dehydrogenase [NADP+] [Clostridium botulinum
H04402 065]
Length = 411
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/326 (40%), Positives = 190/326 (58%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G Y + +A + GWG +V KT+ A V+PR+
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALEIGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L+ +G++N+E I++ LE L+ K+LK YP+K+L+ASIM + N+ W
Sbjct: 63 NLQKEGT-----SFLGFKNMEQIAEHSLEENLEAMKRLKQNYPNKVLVASIMGQ-NEKEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V E G D IE NFSCP M MG+ VGQ+ +L+++ C + +P+ AKM
Sbjct: 117 EELAKLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYCEAVRRGTDIPILAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D++ PA ++ G+ G++ INTI + G+DL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMSVPAIASIEGGATGIATINTIKCITGVDLDKFIGYPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + ++ K +SGIGG+ET DAAEFILLG+ +QV T VM +GY
Sbjct: 236 PIAL----RFIQQLVTDGRLKSVPISGIGGIETWEDAAEFILLGSRNLQVTTAVMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + E L +MK F +ED G
Sbjct: 292 IVEDMIEGLSYYMKEKGFEKLEDMVG 317
>gi|170754614|ref|YP_001782424.1| dihydropyrimidine dehydrogenase [Clostridium botulinum B1 str.
Okra]
gi|429244891|ref|ZP_19208310.1| dihydropyrimidine dehydrogenase subunit B [Clostridium botulinum
CFSAN001628]
gi|169119826|gb|ACA43662.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
B1 str. Okra]
gi|428758081|gb|EKX80534.1| dihydropyrimidine dehydrogenase subunit B [Clostridium botulinum
CFSAN001628]
Length = 411
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/326 (40%), Positives = 190/326 (58%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G Y + +A + GWG +V KT+ A V+PR+
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALEIGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L+ +G++N+E I++ LE L+ K+LK YP+K+L+ASIM + N+ W
Sbjct: 63 NLQKEGT-----SFLGFKNMEQIAEHSLEENLEAMKRLKQNYPNKVLVASIMGQ-NEKEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V E G D IE NFSCP M MG+ VGQ+ +L+++ C + +P+ AKM
Sbjct: 117 EELAKLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYCEAVRRGTDIPILAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D++ PA ++ G+ G++ INTI + G+DL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMSVPAIASIEGGATGIATINTIKCITGVDLDKFIGYPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + ++ K +SGIGG+ET DAAEFILLG+ +QV T VM +GY
Sbjct: 236 PIAL----RFIQQLVTDERLKSVPISGIGGIETWEDAAEFILLGSRNLQVTTAVMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + E L +MK F +ED G
Sbjct: 292 IVEDMIEGLSYYMKEKGFEKLEDMVG 317
>gi|153940176|ref|YP_001392096.1| dihydropyrimidine dehydrogenase [Clostridium botulinum F str.
Langeland]
gi|384463084|ref|YP_005675679.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
F str. 230613]
gi|152936072|gb|ABS41570.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
F str. Langeland]
gi|295320101|gb|ADG00479.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
F str. 230613]
Length = 411
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/326 (40%), Positives = 190/326 (58%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G Y + +A + GWG +V KT+ A V+PR+
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALEIGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L +G++N+E I++ LE L+ K+LK YP+K+L+ASIM + N+ W
Sbjct: 63 NLEKEGT-----SFLGFKNMEQIAEHSLEENLEAMKRLKQNYPNKVLVASIMGQ-NEKEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V E G D IE NFSCP M MG+ VGQ+ +L+++ C + +P+ AKM
Sbjct: 117 EELAKLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYCEAVRRGTDIPILAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D++ PA ++ G+ G++ INTI + G+DL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMSVPAIASIEGGATGIATINTIKCITGVDLDKFIGYPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + ++ K+ +SGIGG+ET DAAEFILLG+ +QV T VM +GY
Sbjct: 236 PIAL----RFIQQLVTDERLKNVPISGIGGIETWEDAAEFILLGSRNLQVTTAVMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + E L +MK F +ED G
Sbjct: 292 IVEDMIEGLSYYMKEKGFEKLEDMVG 317
>gi|168179227|ref|ZP_02613891.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
NCTC 2916]
gi|182669884|gb|EDT81860.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
NCTC 2916]
Length = 411
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 132/326 (40%), Positives = 190/326 (58%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G Y + +A + GWG +V KTV A V+PR+
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALETGWGGIVFKTVGFFIAN--EVSPRFT 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L +G++N+E I++ LE L+ ++LK YP+K+L+ASIM + N+ W
Sbjct: 63 NLEKEGT-----PFLGFKNMEQIAEHSLEENLEAMRKLKENYPNKVLVASIMGQ-NEKEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V E G D IE NFSCP M MG+ VGQ+ +L+++ C + +P+ AKM
Sbjct: 117 EELAKLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYCEAVRRGTDIPILAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D++ PA ++ G+ G++ INTI + G+DL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMSVPAIASIEGGATGIATINTIKCITGVDLDKFIGYPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + ++ ++ +SGIGG+ET DAAEFILLG+ +QV T VM +GY
Sbjct: 236 PIAL----RFIQQLVTDERLRNVPISGIGGIETWEDAAEFILLGSRNLQVTTAVMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + E L +MK F +ED G
Sbjct: 292 IVEDMIEGLSYYMKEKGFEKLEDMVG 317
>gi|148380778|ref|YP_001255319.1| dihydropyrimidine dehydrogenase [Clostridium botulinum A str. ATCC
3502]
gi|153931280|ref|YP_001385063.1| dihydropyrimidine dehydrogenase [Clostridium botulinum A str. ATCC
19397]
gi|153934691|ref|YP_001388532.1| dihydropyrimidine dehydrogenase [Clostridium botulinum A str. Hall]
gi|148290262|emb|CAL84382.1| putative iron-sulfur oxidoreductase [Clostridium botulinum A str.
ATCC 3502]
gi|152927324|gb|ABS32824.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
A str. ATCC 19397]
gi|152930605|gb|ABS36104.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
A str. Hall]
Length = 411
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 133/326 (40%), Positives = 189/326 (57%), Gaps = 13/326 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G Y + +A + GWG +V KT+ A V+PR+
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALEIGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L +G++N+E I++ LE L+ K+LK YP+K+L+ASIM + N+ W
Sbjct: 63 NLEKEGT-----SFLGFKNMEQIAEHSLEENLEAMKRLKQNYPNKVLVASIMGQ-NEKEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V E G D IE NFSCP M MG+ VGQ+ +L+++ C + +P+ AKM
Sbjct: 117 EELAKLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYCEAVRRGTDIPILAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D++ PA ++ G+ G++ INTI + G+DL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMSVPAIASIEGGATGIATINTIKCITGVDLDKFIGYPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + ++ K +SGIGG+ET DAAEFILLG+ +QV T VM +GY
Sbjct: 236 PIAL----RFIQQLVTDGRLKSVPISGIGGIETWEDAAEFILLGSRNLQVTTAVMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + E L +MK F +ED G
Sbjct: 292 IVEDMIEGLSYYMKEKGFEKLEDMVG 317
>gi|424835124|ref|ZP_18259794.1| dihydropyrimidine dehydrogenase subunit B [Clostridium sporogenes
PA 3679]
gi|365978251|gb|EHN14343.1| dihydropyrimidine dehydrogenase subunit B [Clostridium sporogenes
PA 3679]
Length = 411
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 193/327 (59%), Gaps = 15/327 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G Y + +A + GWG +V KT+ A V+PR+
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALETGWGGIVFKTIGFFIAN--EVSPRFT 62
Query: 106 RL-RAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
L + GA +G++N+E I++ LE L+ K+LK YP+K+L+ASIM + N+
Sbjct: 63 NLEKEGA------PFLGFKNMEQIAEHSLEENLEAMKKLKQNYPNKVLVASIMGQ-NEEE 115
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+EL V E G D IE NFSCP M MG+ VGQ+ +L+++ C + +P+ AK
Sbjct: 116 WKELARLVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYCEAVRRGTDIPILAK 174
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
MTPNI D++ PA ++ G+ G++ INTI + G+DL P V G S+ GYS KAV
Sbjct: 175 MTPNIGDMSVPAIASIEGGATGIATINTIKCITGVDLNKFIGYPIVNGKSSISGYSGKAV 234
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL + + ++ KD +SGIGG+ET DAAEFILLG+ +QV T +M +GY
Sbjct: 235 KPIAL----RFIQQLVTDERLKDIPISGIGGIETWEDAAEFILLGSRNLQVTTAIMQYGY 290
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRG 371
+V+ + E L +M+ F +ED G
Sbjct: 291 RIVEDMIEGLSYYMEEKGFEKLEDMVG 317
>gi|110760297|ref|XP_393690.3| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like isoform 1
[Apis mellifera]
Length = 1024
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 133/335 (39%), Positives = 188/335 (56%), Gaps = 12/335 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI + GL+ NPF + S PP T+ T+++RAF+ GWG VV KT SLD V NV+PR
Sbjct: 530 DLSIEICGLKFENPFGLASAPPTTSSTMIRRAFEAGWGFVVTKTFSLDKDLVTNVSPRII 589
Query: 106 RLRAGAN--GSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ + G +G + NIELIS++ ++LK +P KILIASIM YN+A
Sbjct: 590 KGTTSRHHYGPEQGSFL---NIELISEKSEAYWCNSIRELKKDFPTKILIASIMCSYNRA 646
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
W EL + E G DA+E+N SCPHGM E MG A GQD L+ + WI +P +
Sbjct: 647 DWTELSQKAERAGADALELNLSCPHGMGESGMGLACGQDPVLVRNISRWIREAVKIPFFV 706
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGYSCK 282
K+TPNITDI A+ A + GVSAINT+ S+MG+ T P ++ +T GG S
Sbjct: 707 KLTPNITDIVSIAKAAYEGHANGVSAINTVQSLMGLHADATPWPAVGIKKATTYGGMSGN 766
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A P AL V +I+K + + + GIGG+E+ A +F+ GA+ +QVC+ V
Sbjct: 767 ATRPQALRAVSAISKALPG------FPILGIGGIESADVALQFLHCGASVLQVCSAVQNQ 820
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYF 377
+ L+ LK + + N ++++ G S F
Sbjct: 821 DFTLIDDYITGLKALLYLKNLKQLKNWDGQSPPTF 855
>gi|453328831|dbj|GAC88928.1| dihydropyrimidine dehydrogenase [Gluconobacter thailandicus NBRC
3255]
Length = 422
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 199/338 (58%), Gaps = 10/338 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL G++ PNPF + S PP ++RAF GWG VV KT+ D V+N++ RY
Sbjct: 3 DLRTVFAGIKSPNPFWLASAPPTDKEYNVRRAFQAGWGGVVWKTLGEDP-PVVNLSSRY- 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
GA G ++IG NIELISDRPL T + E K++K +PD+ +I S+M + W
Sbjct: 61 ----GALGFEGRRLIGLNNIELISDRPLATNIAEIKRVKREFPDRAVIVSLMVPCEEDKW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ +E V W +PV K+
Sbjct: 117 KAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTRWCKQNTRMPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+T+I PAR A G++ VS INTI SV+G+DL + P P V G T GGY AV
Sbjct: 177 TPNVTNILMPARAARAGGADAVSLINTIQSVIGVDLDAMAPMPVVGGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + IA+ + +SGIGG+ D+AEF+ +GA ++QVCT M +G+
Sbjct: 237 PIALRMIGEIAR----DPTMAGIPISGIGGISNWRDSAEFLAMGAGSLQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + + L ++M ++ ++D G ++ F +L
Sbjct: 293 IVEDMIDGLSNWMDGKGYARLDDVTGRAVSRFVPWNQL 330
>gi|414342597|ref|YP_006984118.1| dihydropyrimidine dehydrogenase subunit B [Gluconobacter oxydans
H24]
gi|411027932|gb|AFW01187.1| dihydropyrimidine dehydrogenase subunit B [Gluconobacter oxydans
H24]
Length = 422
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 142/338 (42%), Positives = 200/338 (59%), Gaps = 10/338 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL G++ PNPF + S PP ++RAF GWG VV KT+ D V+N++ RY
Sbjct: 3 DLRTVFAGIKSPNPFWLASAPPTDKEYNVRRAFQAGWGGVVWKTLGEDP-PVVNLSSRY- 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
GA G ++IG NIELISDRPL T + E K++K +PD+ +I S+M + W
Sbjct: 61 ----GALGFEGRRLIGLNNIELISDRPLATNIAEIKRVKREFPDRAVIVSLMVPCEEDKW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VEETG D IE+NF CPHGM ER MGAAVGQ +E V W +PV K+
Sbjct: 117 KAILPIVEETGADGIELNFGCPHGMSERNMGAAVGQVPEYVEMVTRWCKQNTRMPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+T+I PAR A G++ VS INTI SV+G+DL + P P V G T GGY AV
Sbjct: 177 TPNVTNILMPARAARAGGADAVSLINTIQSVIGVDLDAMAPMPVVGGKGTHGGYCGPAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + IA+ + S+SGIGG+ D+AEF+ +GA ++QVCT M +G+
Sbjct: 237 PIALRMIGEIAR----DPTMAGISISGIGGISNWRDSAEFLAMGAGSLQVCTAAMHYGFR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+V+ + + L ++M ++ ++D G ++ F +L
Sbjct: 293 IVEDMIDGLSNWMDGKGYARLDDVTGRAVSRFVPWNQL 330
>gi|324501269|gb|ADY40567.1| Dihydropyrimidine dehydrogenase NADP+ [Ascaris suum]
Length = 1059
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 189/336 (56%), Gaps = 18/336 (5%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
E D+S+ + GL+ NPF + S PP T+ + +RAF++GW ++ KT SLD V NV+PR
Sbjct: 552 EVDISVNMCGLKFENPFGLASAPPTTSGAMCRRAFEQGWSFILTKTFSLDKDLVTNVSPR 611
Query: 104 YARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIME 158
R G+ G + G + NIELIS++ E L +LK +P KI+IASIM
Sbjct: 612 IVR------GTTSGHLYGPQQGSFLNIELISEKTAEYWLTCIGELKRDFPSKIIIASIMA 665
Query: 159 EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
+N+ W EL R E G DA+E+N SCPHGM ER MG A GQD ++ +C W+ +
Sbjct: 666 SFNQDDWIELASRAEAAGADALELNLSCPHGMGERGMGLACGQDPNMVRSICQWVRSAVE 725
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGI-DLKTLRPEPCVEGYSTPG 277
+P +AKMTPN+TDI A+ A ++GV+A NT+ +M + + + P VE +T G
Sbjct: 726 IPFFAKMTPNVTDIRTIAKAAKDGNADGVTATNTVSGLMSLKEDGSAWPSVGVERRTTYG 785
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
G S A+ PIAL V +IA + + + GG+E+ +F+ GA+ +QVC+
Sbjct: 786 GVSGSAIRPIALRAVSAIANALPG------FPILATGGIESAETGLQFLHAGASVLQVCS 839
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V Y L+ C L+ + + S++D+ G S
Sbjct: 840 AVQNQDYTLIDDYCTGLRALLYLSGVKSLKDWNGQS 875
>gi|194769374|ref|XP_001966779.1| GF19101 [Drosophila ananassae]
gi|190618300|gb|EDV33824.1| GF19101 [Drosophila ananassae]
Length = 1034
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 197/339 (58%), Gaps = 12/339 (3%)
Query: 24 GLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWG 83
GL L + L + +D E D+S+ + G++ NPF + S PP T+ +++RAF++GWG
Sbjct: 507 GLPLSTPAALPLFYTDID--EVDISVDLCGIRFENPFGLASAPPTTSTAMIRRAFEQGWG 564
Query: 84 AVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-WENIELISDRPLETMLKEFKQ 142
VV KT LD V NV+PR +R +G G G + NIELIS++ E L+ +
Sbjct: 565 FVVTKTFGLDKDLVTNVSPRI--VRGTTSGYKYGPQQGCFLNIELISEKRAEYWLRGIAE 622
Query: 143 LKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQD 202
LK +P+K++IASIM +N+A W EL R E+G DA+E+N SCPHGM ER MG A GQD
Sbjct: 623 LKKDFPEKVIIASIMCSFNEADWTELAKRAAESGADALELNLSCPHGMGERGMGLACGQD 682
Query: 203 CRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK 262
L+E++ W+ T+P + K+TPNITDI A A R G++G SAINT+ +M +
Sbjct: 683 PELVEQISRWVRRAVTLPFFIKLTPNITDIVAIAEAAKRGGADGGSAINTVQGLMSLKAD 742
Query: 263 -TLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGD 321
T P E +T GG S A P+AL + IA+ + + + GIGG+++G
Sbjct: 743 ATAWPAIGKEQRTTYGGVSGNATRPMALKAISDIARRVPG------FPILGIGGIDSGEV 796
Query: 322 AAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKM 360
A +FI GA +Q+C+ V + +++ C L+ + +
Sbjct: 797 ALQFIQAGATVLQICSSVQNQDFTVIEDYCTSLRALLYL 835
>gi|300727885|ref|ZP_07061264.1| dihydropyrimidine dehydrogenase [Prevotella bryantii B14]
gi|299774869|gb|EFI71482.1| dihydropyrimidine dehydrogenase [Prevotella bryantii B14]
Length = 508
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 132/349 (37%), Positives = 206/349 (59%), Gaps = 13/349 (3%)
Query: 37 ASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAK 96
A S + PD+S + G+++ NPF++ S +NY ++ AF GW V KT+
Sbjct: 99 ALTSTADMPDISTDICGVKLENPFMLSSSVVASNYEMIANAFRAGWAGVSFKTICNFPQH 158
Query: 97 VINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI 156
+PR++ + AN G++NIE +SD ++ ++ F+QLKA +P+K+++ASI
Sbjct: 159 --EASPRFSTISNHANA-----FCGFKNIEQLSDHSVDENMEVFRQLKAEFPNKVIVASI 211
Query: 157 MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK 216
M + N+ W L + EE G D IE NFSCP+ M K+G +GQD L+E
Sbjct: 212 MGQ-NEEEWTTLARKCEEAGADVIECNFSCPN-MENDKLGITIGQDATLIERFTRATRLG 269
Query: 217 ATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTP 276
+P+ AKMTPNITD+ A A R G++G++AINTI S+ G+DL++L +P V GYS
Sbjct: 270 TNLPILAKMTPNITDMVPMAIAAKRGGADGIAAINTINSITGVDLESLVAKPEVHGYSMV 329
Query: 277 GGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336
GGYS +AV PIAL I+ + SE D +SG+GG+E+ DA +F+ LGAN++QV
Sbjct: 330 GGYSGQAVKPIAL---RFISDLGHSE-ELADMHISGMGGIESWIDAVDFLALGANSLQVT 385
Query: 337 TGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
T VM +GY +V+ + L+ ++K + ++ G + + +HT++ R
Sbjct: 386 TSVMQYGYRIVEDMISGLQFYLKAIHMDQLKKLSGVARKTVVSHTQVER 434
>gi|440782168|ref|ZP_20960288.1| dihydropyrimidine dehydrogenase subunit B [Clostridium pasteurianum
DSM 525]
gi|440220197|gb|ELP59405.1| dihydropyrimidine dehydrogenase subunit B [Clostridium pasteurianum
DSM 525]
Length = 399
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 141/342 (41%), Positives = 198/342 (57%), Gaps = 17/342 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S G N+ + +A + GWG VV KT+ +K V+PR+
Sbjct: 3 DLSIEFCGVKCENPFFLSSSVVGNNFEMCAKALEMGWGGVVFKTIGFYVSK--EVSPRFD 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ G G+ IG++N+E IS+ LE L+ +QLK YP+KIL+ASIM + N+ W
Sbjct: 61 TI--GKEGTP---FIGFKNLEQISEHSLEENLEWMRQLKEKYPNKILVASIMGQ-NEQEW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EL V E G D IE NFSCP M MG+ VGQ+ L++ C + +P+ AKM
Sbjct: 115 TELAKLVTEIGADIIECNFSCPQ-MASDAMGSDVGQNPELVKRYCEATRKGSNLPILAKM 173
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI ++ PA A+ G+ G++AINTI S+ IDL + P V G S+ GYS KAV
Sbjct: 174 TPNIGNMEIPAIAAMEGGATGLAAINTIKSITKIDLDSFLSYPIVNGKSSVSGYSGKAVK 233
Query: 286 PIALGKVMSIAKMMKSEFND--KDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
PIAL + +AK N+ K +SG+GG+ET DAAEFILLG+ +QV T VM +G
Sbjct: 234 PIALRFIHDLAK------NETLKGVPISGMGGIETWEDAAEFILLGSTNLQVTTAVMQYG 287
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
Y +++ L L +M+ F ++D G ++E EL R
Sbjct: 288 YRIIEDLISGLSYYMEDKGFDKLQDMVGLALENIVPAEELDR 329
>gi|194890619|ref|XP_001977354.1| GG18994 [Drosophila erecta]
gi|190649003|gb|EDV46281.1| GG18994 [Drosophila erecta]
Length = 1033
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 24 GLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWG 83
GL L + L + +D + D+S+ + G++ NPF + S PP T+ +++RAF++GWG
Sbjct: 507 GLPLDTPAALPLFYTDIDAV--DISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQGWG 564
Query: 84 AVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-WENIELISDRPLETMLKEFKQ 142
VV KT LD V NV+PR +R +G G G + NIELIS++ E LK +
Sbjct: 565 FVVTKTFGLDKNLVTNVSPRI--VRGTTSGYKYGPQQGCFLNIELISEKRAEYWLKSIGE 622
Query: 143 LKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQD 202
LK +P+KI+IASIM +N+ W EL + E++G DA+E+N SCPHGM ER MG A GQD
Sbjct: 623 LKRDFPEKIVIASIMCGFNEDDWTELATKAEQSGADALELNLSCPHGMGERGMGMACGQD 682
Query: 203 CRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDL- 261
+L+E++ W+ +P++ K+TPNITDI A A R G++G SAINT+ +MG+
Sbjct: 683 PQLVEQISRWVRKAVKLPIFIKLTPNITDIVSIAAAAKRGGADGGSAINTVQGLMGLKAD 742
Query: 262 KTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGD 321
T P E +T GG S A P+AL + IA + + + GIGG+++G
Sbjct: 743 STAWPAIGKEQRTTYGGVSGNATRPMALKAISDIANRLPG------FPILGIGGIDSGEV 796
Query: 322 AAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKM 360
A +FI GA+ +Q+C+ V + +++ C LK + +
Sbjct: 797 ALQFIHAGASVLQICSSVQNQDFTVIEDYCTSLKALLYL 835
>gi|332221979|ref|XP_003260142.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] isoform 1
[Nomascus leucogenys]
Length = 1025
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 191/334 (57%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL + E++G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NKNDWMELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ T P + +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKSDGTPWPAVGIAKRTTYGGV 765
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 766 SGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 819
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 820 QNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQS 853
>gi|402855350|ref|XP_003892289.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial
[Papio anubis]
Length = 776
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 191/334 (57%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 434 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 493
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 494 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 547
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL + E++G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 548 NKNDWMELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 607
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ T P + +T GG
Sbjct: 608 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKSDGTPWPAVGIAKRTTYGGV 667
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 668 SGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 721
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 722 QNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQS 755
>gi|25140985|ref|NP_740748.1| dihydropyrimidine dehydrogenase [NADP(+)] [Mus musculus]
gi|81878130|sp|Q8CHR6.1|DPYD_MOUSE RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|24980778|gb|AAH39699.1| Dihydropyrimidine dehydrogenase [Mus musculus]
gi|148680406|gb|EDL12353.1| dihydropyrimidine dehydrogenase [Mus musculus]
Length = 1025
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 188/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ PNPF + S P T+ +++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLRFPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ +LKA +PD ILIASIM Y
Sbjct: 592 R------GTTSGPLYGPGQSSFLNIELISEKTAAYWCHSVTELKADFPDNILIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK+ W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ VP
Sbjct: 646 NKSDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVRVP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ T P + +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGIGRRTTYGGV 765
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 766 SGTAIRPIALRAVTAIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 819
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + + D+ G S
Sbjct: 820 QNQDFTVIEDYCTGLKALLYLKSIEELADWDGQS 853
>gi|253682030|ref|ZP_04862827.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
D str. 1873]
gi|253561742|gb|EES91194.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
D str. 1873]
Length = 411
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 133/340 (39%), Positives = 196/340 (57%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G Y + +A + GWG +V KT+ + K V+PR+
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALETGWGGIVFKTIGFFSPK--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L+ +G++N+E I++ LE L+ ++LK YP K+L+ASIM + N++ W
Sbjct: 63 NLKKECT-----PFLGFKNMEQIAEHSLEENLESMRRLKENYPSKVLVASIMGQ-NESEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+L V E G D IE NFSCP M MG+ VGQ+ L+++ C + +P+ AKM
Sbjct: 117 TKLAKLVTEIGADIIECNFSCPQ-MTSHDMGSDVGQNPELVKKYCQAVRKGTNLPILAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI ++T PA ++ G+ G++ INTI + GIDL + P + G S+ GYS KAV
Sbjct: 176 TPNIGNMTIPAIASIEGGATGIATINTIKCISGIDLDNMVGLPVINGKSSVSGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +K+ K+ LSGIGG+ET DA EFILLG++ +QV T VM +GY
Sbjct: 236 PIALRFIYE----LKTNKKLKEIPLSGIGGIETWEDAVEFILLGSSNLQVTTSVMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+V+ + L +MK F +ED G +++ EL R
Sbjct: 292 IVEDMISGLSYYMKEKGFEKLEDMVGLALKNIIPAEELDR 331
>gi|28386052|gb|AAH44730.1| Dpyd protein [Mus musculus]
Length = 512
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 188/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ PNPF + S P T+ +++RAF+ GWG + KT SLD V NV+PR
Sbjct: 19 DISVEMAGLRFPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 78
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ +LKA +PD ILIASIM Y
Sbjct: 79 R------GTTSGPLYGPGQSSFLNIELISEKTAAYWCHSVTELKADFPDNILIASIMCSY 132
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK+ W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ VP
Sbjct: 133 NKSDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVRVP 192
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ T P + +T GG
Sbjct: 193 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGIGRRTTYGGV 252
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 253 SGTAIRPIALRAVTAIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 306
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + + D+ G S
Sbjct: 307 QNQDFTVIEDYCTGLKALLYLKSIEELADWDGQS 340
>gi|27768991|gb|AAH42543.1| Dpyd protein, partial [Mus musculus]
Length = 879
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 188/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ PNPF + S P T+ +++RAF+ GWG + KT SLD V NV+PR
Sbjct: 386 DISVEMAGLRFPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 445
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ +LKA +PD ILIASIM Y
Sbjct: 446 R------GTTSGPLYGPGQSSFLNIELISEKTAAYWCHSVTELKADFPDNILIASIMCSY 499
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK+ W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ VP
Sbjct: 500 NKSDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVRVP 559
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ T P + +T GG
Sbjct: 560 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGIGRRTTYGGV 619
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 620 SGTAIRPIALRAVTAIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 673
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + + D+ G S
Sbjct: 674 QNQDFTVIEDYCTGLKALLYLKSIEELADWDGQS 707
>gi|109011616|ref|XP_001106007.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Macaca mulatta]
Length = 1025
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 191/334 (57%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL + E++G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NKNDWMELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ T P + +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKSDGTPWPAVGIAKRTTYGGV 765
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 766 SGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 819
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 820 QNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQS 853
>gi|327270715|ref|XP_003220134.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Anolis
carolinensis]
Length = 1036
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 189/335 (56%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ PNPF + S P T+ +++RAF+ GWG + KT SLD V NV+PR
Sbjct: 543 DISVEMAGLKFPNPFGLASATPTTSSPMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 602
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G I G + NIELIS++ K +LK +PDKILIASIM Y
Sbjct: 603 R------GTTSGPIYGPGQGSFLNIELISEKTAAYWCKSVTELKTDFPDKILIASIMCSY 656
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W +L E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 657 NKEDWTQLSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 716
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGG 278
+AK+TPN+TDI AR + G++GV+A NT+ +MG+ + P P V +T GG
Sbjct: 717 FFAKLTPNVTDIVSIARASQEGGADGVTATNTVSGLMGLRADGI-PWPAVGRGDKTTYGG 775
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ PIAL V +IA + + + GG+++ +F+ GA+ +QVC+
Sbjct: 776 VSGNAIRPIALRAVSAIAHALPG------FPVLATGGIDSAESGLQFLHCGASVLQVCSA 829
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ + +++ C LK + + + ++D+ G S
Sbjct: 830 IQNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQS 864
>gi|119943098|ref|NP_000101.2| dihydropyrimidine dehydrogenase [NADP(+)] isoform 1 [Homo sapiens]
gi|160332325|sp|Q12882.2|DPYD_HUMAN RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil
dehydrogenase; Flags: Precursor
gi|693912|gb|AAB51366.1| dihydropyrimidine dehydrogenase [Homo sapiens]
gi|6729338|dbj|BAA89789.1| dihydropyrimidine dehydrogenase [Homo sapiens]
gi|119593409|gb|EAW73003.1| dihydropyrimidine dehydrogenase, isoform CRA_b [Homo sapiens]
Length = 1025
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 190/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL + E++G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G+ GV+A NT+ +MG+ T P + +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDGTPWPAVGIAKRTTYGGV 765
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 766 SGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 819
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 820 QNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQS 853
>gi|124297137|gb|AAI31778.1| Dihydropyrimidine dehydrogenase [Homo sapiens]
Length = 1025
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 190/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFVNPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL + E++G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G+ GV+A NT+ +MG+ T P + +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDGTPWPAVGIAKRTTYGGV 765
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 766 SGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 819
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 820 QNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQS 853
>gi|397474053|ref|XP_003808505.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Pan paniscus]
Length = 1025
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 190/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL + E++G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G+ GV+A NT+ +MG+ T P + +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDATPWPAVGIAKRTTYGGV 765
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 766 SGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 819
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 820 QNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQS 853
>gi|558305|gb|AAA57474.1| dihydropyrimidine dehydrogenase [Homo sapiens]
Length = 1025
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 190/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL + E++G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G+ GV+A NT+ +MG+ T P + +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDGTPWPAVGIAKRTTYGGV 765
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 766 SGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 819
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 820 QNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQS 853
>gi|332809597|ref|XP_513583.3| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] isoform 3 [Pan
troglodytes]
gi|410212198|gb|JAA03318.1| dihydropyrimidine dehydrogenase [Pan troglodytes]
gi|410260464|gb|JAA18198.1| dihydropyrimidine dehydrogenase [Pan troglodytes]
gi|410297350|gb|JAA27275.1| dihydropyrimidine dehydrogenase [Pan troglodytes]
gi|410355311|gb|JAA44259.1| dihydropyrimidine dehydrogenase [Pan troglodytes]
Length = 1025
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 190/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL + E++G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G+ GV+A NT+ +MG+ T P + +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDATPWPAVGIAKRTTYGGV 765
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 766 SGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 819
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 820 QNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQS 853
>gi|399889561|ref|ZP_10775438.1| dihydropyrimidine dehydrogenase subunit B [Clostridium arbusti
SL206]
Length = 399
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 196/340 (57%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S G N+ + +A + GWG VV KT+ +K V+PR+
Sbjct: 3 DLSIEFCGVKCENPFFLSSSVVGNNFEMCAKALEMGWGGVVFKTIGFYVSK--EVSPRFD 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ G G+ IG++N+E IS+ LE L+ +QLK YP KIL+ASIM + N+ W
Sbjct: 61 TI--GKEGTP---FIGFKNLEQISEHSLEENLEWMRQLKEKYPSKILVASIMGQ-NEHEW 114
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+L V E G D IE NFSCP M MG+ VGQ+ L+++ C +P+ AKM
Sbjct: 115 TDLAKLVTEIGADIIECNFSCPQ-MANNDMGSDVGQNPELVKKYCQATRRGTNLPILAKM 173
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI ++ PA A+ G+ G++AINTI S+ IDL + P V G S+ GYS KAV
Sbjct: 174 TPNIGNMEVPAIAAMEGGATGLAAINTIKSITKIDLDSFLSYPIVNGKSSVSGYSGKAVK 233
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +AK K +SG+GG+ET DAAEFILLG+ +Q+ T VM +GY
Sbjct: 234 PIALRFIHDMAKNKTL----KGVPISGMGGIETWEDAAEFILLGSTNLQITTAVMQYGYR 289
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+++ L L +M+ F+ +ED G ++E EL R
Sbjct: 290 IIEDLISGLSYYMEEKGFNKLEDMVGLALENIVPAEELDR 329
>gi|195479863|ref|XP_002101056.1| GE17405 [Drosophila yakuba]
gi|194188580|gb|EDX02164.1| GE17405 [Drosophila yakuba]
Length = 1031
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/339 (39%), Positives = 197/339 (58%), Gaps = 12/339 (3%)
Query: 24 GLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWG 83
GL L + L + +D + D+S+ + G++ NPF + S PP T+ +++RAF++GWG
Sbjct: 507 GLPLNTPAALPLFYTDIDAV--DISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQGWG 564
Query: 84 AVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-WENIELISDRPLETMLKEFKQ 142
VV KT LD V NV+PR +R +G G G + NIELIS++ E LK +
Sbjct: 565 FVVTKTFGLDKDLVTNVSPRI--VRGTTSGYKYGPQQGCFLNIELISEKRAEYWLKSIGE 622
Query: 143 LKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQD 202
LK +P+KI+IASIM +N+A W EL + E++G DA+E+N SCPHGM ER MG A GQD
Sbjct: 623 LKRDFPEKIVIASIMCSFNEADWTELAIKAEQSGADALELNLSCPHGMGERGMGLACGQD 682
Query: 203 CRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDL- 261
L+E++ W+ +P + K+TPNITDI A A R G++G SAINT+ +MG+
Sbjct: 683 PELVEQISRWVRKAVKLPFFIKLTPNITDIVSIAAAAQRGGADGGSAINTVQGLMGLKAD 742
Query: 262 KTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGD 321
T P E +T GG S A P+AL + IA + + + GIGG+++G
Sbjct: 743 STAWPAIGKEQRTTYGGVSGNATRPMALKAISDIANRVPG------FPILGIGGIDSGEV 796
Query: 322 AAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKM 360
A +FI GA +Q+C+ V + +++ C LK + +
Sbjct: 797 ALQFIQAGATVLQICSSVQNQDFTVIEDYCTALKALLYL 835
>gi|158255870|dbj|BAF83906.1| unnamed protein product [Homo sapiens]
Length = 1025
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 190/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL + E++G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G+ GV+A NT+ +MG+ T P + +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDGTPWPAVGIAKRTTYGGV 765
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 766 SGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 819
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 820 QNQDFTVIEDYCTGLKALLYLKSIEGLQDWDGQS 853
>gi|255528042|ref|ZP_05394877.1| dihydroorotate dehydrogenase family protein [Clostridium
carboxidivorans P7]
gi|296188156|ref|ZP_06856548.1| dihydropyrimidine dehydrogenase [Clostridium carboxidivorans P7]
gi|255508256|gb|EET84661.1| dihydroorotate dehydrogenase family protein [Clostridium
carboxidivorans P7]
gi|296047282|gb|EFG86724.1| dihydropyrimidine dehydrogenase [Clostridium carboxidivorans P7]
Length = 412
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 197/340 (57%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G NY + +A + GWG +V KTV + A V+PR++
Sbjct: 5 DLSIDFCGVKCENPFFLSSSPVGNNYDMCAKALETGWGGIVFKTVGIFIAN--EVSPRFS 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L + +G++N+E+I++ PL+ L++ + LK YP+K+LIASIM E N+ W
Sbjct: 63 ALTKEST-----PFVGFKNMEMIAEHPLDFNLEQMRLLKKNYPNKVLIASIMGE-NEEEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+L V E G D IE NFSCP M MG+ VGQ+ L+++ + +P+ AKM
Sbjct: 117 TKLAKSVTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPALVKKYSAAVRKGTHLPIIAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI ++ PA A+ G+ G+SAINTI + G+DL L P V G S+ GYS KA+
Sbjct: 176 TPNIGNMEMPAIGAIEGGATGISAINTIKCITGMDLDKLVGLPIVNGKSSISGYSGKAIK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +AK E K+ +SGIGG+E DA EFILLGA+ VQV T +M +GY
Sbjct: 236 PIALRFIAQLAK----EPKLKNVPISGIGGIENWEDALEFILLGASNVQVTTAIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+V+ + L +M+ + GA++ + EL R
Sbjct: 292 IVEDMISGLSYYMEDKGIDKLHQLVGAALNNIVSAEELDR 331
>gi|355558194|gb|EHH14974.1| hypothetical protein EGK_00997 [Macaca mulatta]
Length = 1025
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 190/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL + E++G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NKNDWMELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G+ GV+A NT+ +MG+ T P + +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDGTPWPAVGIAKRTTYGGV 765
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 766 SGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 819
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 820 QNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQS 853
>gi|418041966|ref|ZP_12680177.1| dihydropyrimidine dehydrogenase [Escherichia coli W26]
gi|383475153|gb|EID67121.1| dihydropyrimidine dehydrogenase [Escherichia coli W26]
Length = 380
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 180/296 (60%), Gaps = 13/296 (4%)
Query: 76 RAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLET 135
+A+D GWG VV KT+ A V+PR+ L G IG++N+E I++ PLE
Sbjct: 4 KAYDTGWGGVVFKTIGFFIAN--EVSPRFDHLVKEDTG-----FIGFKNMEQIAEHPLEE 56
Query: 136 MLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKM 195
L +QLK YPDK+LIASIM E N+ WEEL V+E G D IE NFSCP M M
Sbjct: 57 NLAALRQLKEDYPDKVLIASIMGE-NEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAM 114
Query: 196 GAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMS 255
G+ VGQ L+E+ C + +T+P+ AKMTPNI D+ E A A R G++G++AINT+ S
Sbjct: 115 GSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKS 174
Query: 256 VMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGG 315
+ IDL P V G S+ GYS KAV PIAL + M++ +D+ +SGIGG
Sbjct: 175 ITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIAL----RFIQQMRTHPELRDFPISGIGG 230
Query: 316 VETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L ++ F S+++ G
Sbjct: 231 IETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFDSLQEMVG 286
>gi|124298016|gb|AAI31779.1| Dihydropyrimidine dehydrogenase [Homo sapiens]
Length = 1025
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/334 (37%), Positives = 190/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL + E++G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G+ G++A NT+ +MG+ T P + +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGANGITATNTVSGLMGLKSDGTPWPAVGIAKRTTYGGV 765
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 766 SGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 819
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 820 QNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQS 853
>gi|344293562|ref|XP_003418491.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Loxodonta
africana]
Length = 1052
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 189/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + G++ NPF + S P T+ ++++RAF+ GWG V KT SLD V NV+PR
Sbjct: 559 DISVEMAGMKFTNPFGLASATPATSASMIRRAFEAGWGFAVTKTFSLDKDIVTNVSPRII 618
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 619 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKAEFPDNIVIASIMCSY 672
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ VP
Sbjct: 673 NKNDWMELSKMAEHSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVHVP 732
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G++GV+A NT+ +MG++ T P V +T GG
Sbjct: 733 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLNADGTPWPAVGVGKRTTYGGV 792
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 793 SGTAIRPIALRAVTSIARALPG------FPVLATGGIDSAESGLQFLHSGASVLQVCSAI 846
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ ++ C LK + + + ++D+ G S
Sbjct: 847 QNQDFTVIGDYCTGLKALLYLKSIEELQDWDGQS 880
>gi|149025817|gb|EDL82060.1| rCG28563 [Rattus norvegicus]
Length = 557
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 187/335 (55%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ PNPF + S P T+ +++RAF+ GWG + KT SLD V NV+PR
Sbjct: 64 DISVEMAGLRFPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 123
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ +LKA +PD ILIASIM Y
Sbjct: 124 R------GTTSGPLYGPGQSSFLNIELISEKTAAYWCHSVTELKADFPDNILIASIMCSY 177
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ VP
Sbjct: 178 NKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQSVRVP 237
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG--YSTPGG 278
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ P P V +T GG
Sbjct: 238 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADG-SPWPSVGSGKRTTYGG 296
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+
Sbjct: 297 VSGTAIRPIALRAVTAIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSA 350
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ + +++ C LK + + + + D+ G S
Sbjct: 351 IQNQDFTVIEDYCTGLKALLYLKSIEELSDWDGQS 385
>gi|334324361|ref|XP_001381838.2| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Monodelphis
domestica]
Length = 1051
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 188/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ PNPF + S PP T+ ++++RAF+ GWG V KT SLD V NV+PR
Sbjct: 558 DISVEMAGLKFPNPFGLASAPPATSASMIRRAFEAGWGFAVTKTFSLDKDIVTNVSPRII 617
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G G + G + NIELIS++ + +LKA +PD ILIAS+M Y
Sbjct: 618 R------GITSGPVYGPGQSSFLNIELISEKTAAYWCQCVTELKADFPDNILIASLMCTY 671
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL E G DA+E+N SC HGM ER MG A GQD ++ +C WI +P
Sbjct: 672 NKNDWTELSKMAEAAGADALELNLSCSHGMGERGMGLACGQDPDMVRNICRWIRQAVRIP 731
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPNITDI AR A G++GV+A NT++ +MG+ T P + +T G
Sbjct: 732 FFAKLTPNITDIVSIARAAQEGGADGVTATNTVLGLMGLKADGTPWPAIGLGKKTTYGSI 791
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S AV PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+ V
Sbjct: 792 SGTAVRPIALRAVAAIARDLPG------FPILATGGIDSAESGLQFLQSGASVLQVCSAV 845
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ ++K C LK + + + ++D+ G S
Sbjct: 846 QNQDFTVIKDYCTGLKALLYLKSIEELKDWDGQS 879
>gi|308511285|ref|XP_003117825.1| CRE-DPYD-1 protein [Caenorhabditis remanei]
gi|308238471|gb|EFO82423.1| CRE-DPYD-1 protein [Caenorhabditis remanei]
Length = 1074
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 193/337 (57%), Gaps = 20/337 (5%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
E D+S+ + G++ NPF + S PP T+ + +RAF++GWG ++ KT LD V NV+PR
Sbjct: 559 EVDISVDMCGVKFENPFGLASAPPTTSGPMCRRAFEQGWGFILTKTYGLDKDLVTNVSPR 618
Query: 104 YARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIME 158
R GS G + G + NIELIS++ E L+ ++LK +P KI++ASIM
Sbjct: 619 IVR------GSTSGPVYGPNQGSFMNIELISEKSTEYWLQCIRELKRDHPTKIVVASIMC 672
Query: 159 EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
YNKA W EL + EE G D +E+N SCPHGM E+ MG A GQ +++E+C W+ A
Sbjct: 673 TYNKADWVELATQSEEAGADILELNLSCPHGMGEKGMGLACGQSPEIVKEICRWVRACVK 732
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG--YSTP 276
+P + KMTPNITD+ E AR A G+ GV+A NT+ S+M + P + G +T
Sbjct: 733 IPFFPKMTPNITDVREIARAARDGGASGVTATNTVSSLMHMKADG-NAWPAIGGAKRTTY 791
Query: 277 GGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336
GG S A+ PIA+ V SIA + + + GG+E+ F++ GA+ +QVC
Sbjct: 792 GGMSGSAIRPIAMKAVSSIANELDG------FPIMATGGIESAETGLGFLMAGASVLQVC 845
Query: 337 TGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ V + +V+ C LK + + S++D+ G S
Sbjct: 846 SAVQNQDFTVVEDYCTGLKALLYLSGAESLKDWDGQS 882
>gi|403283991|ref|XP_003933373.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Saimiri
boliviensis boliviensis]
Length = 1204
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 192/334 (57%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+++ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 707 DITVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 766
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 767 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVNELKADFPDNIVIASIMCSY 820
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL E++G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 821 NKNDWMELSKMSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVRIP 880
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ T P + +T GG
Sbjct: 881 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKSDGTPWPAVGIAKRTTYGGM 940
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V SIA+ + + + GG+++ A +F+ GA+ +QVC+ +
Sbjct: 941 SGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESALQFLHSGASVLQVCSAI 994
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + + ++D+ G S
Sbjct: 995 QNQDFTVIEDYCTGLKAMLYLKSIAELQDWDGQS 1028
>gi|156369958|ref|XP_001628240.1| predicted protein [Nematostella vectensis]
gi|156215211|gb|EDO36177.1| predicted protein [Nematostella vectensis]
Length = 1081
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/335 (38%), Positives = 184/335 (54%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ + G++ PNPF + S PP T +++R F+ GWG + KT SLD V NV+PR
Sbjct: 532 DLSVEICGIKFPNPFGLASAPPTTTSAMIRRGFEAGWGFALTKTFSLDKDIVTNVSPRIV 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LK +PDKILIASIM Y
Sbjct: 592 R------GTTSGHLYGPGQGSFLNIELISEKTSAYWCRSITELKKDFPDKILIASIMCGY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+K W L E G DA+E+N SCPHGM ER MG A GQD L+ +C W+ A T+P
Sbjct: 646 SKQDWTTLAKMAEAAGADALELNLSCPHGMGERGMGLACGQDAELVRNICRWVRAAITIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGG 278
+AK+TPN+TDI AR A ++GV+A NT+ +MG+ T P + E +T GG
Sbjct: 706 FFAKLTPNVTDIVVIARAAKEGNADGVTATNTVSGLMGLK-GTSEAWPAIGREKRTTYGG 764
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ PIAL V +I + + + + GG+++ A +F+ GA+ +QVC+
Sbjct: 765 MSGNAIRPIALRAVSAIGRALPG------FPILATGGIDSADAALQFLHCGASALQVCSA 818
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V + +V LK M M + D+ G S
Sbjct: 819 VQNQDFTVVDDYINGLKCLMYMKSVDEYADWEGQS 853
>gi|197100733|ref|NP_001126169.1| dihydropyrimidine dehydrogenase [NADP(+)] [Pongo abelii]
gi|75041534|sp|Q5R895.1|DPYD_PONAB RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|55730588|emb|CAH92015.1| hypothetical protein [Pongo abelii]
Length = 1025
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/334 (37%), Positives = 189/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIV 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL + E++G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NKNDWTELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G+ GV+A NT+ +MG+ T P + +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKSDGTPWPAVGIAKRTTYGGV 765
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V S A+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 766 SGTAIRPIALRAVTSTARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 819
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 820 QNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQS 853
>gi|380027208|ref|XP_003697321.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Apis
florea]
Length = 1024
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 132/335 (39%), Positives = 187/335 (55%), Gaps = 12/335 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ + GL+ NPF + S PP T+ T+++RAF+ GWG VV KT SLD V NV+PR
Sbjct: 530 DLSVEICGLKFENPFGLASAPPTTSSTMIRRAFEAGWGFVVTKTFSLDKDLVTNVSPRII 589
Query: 106 RLRAGAN--GSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ + G +G + NIELIS++ +LK +P KILIASIM YN+A
Sbjct: 590 KGTTSRHHYGPEQGSFL---NIELISEKSEAYWCNSIIELKKDFPTKILIASIMCSYNRA 646
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
W EL + E G DA+E+N SCPHGM E MG A GQD L+ + WI +P +
Sbjct: 647 DWTELSQKAERAGADALELNLSCPHGMGESGMGLACGQDPVLVRNISRWIREAVKIPFFV 706
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGYSCK 282
K+TPNITDI A+ A + GVSAINT+ S+MG+ T P ++ +T GG S
Sbjct: 707 KLTPNITDIVSIAKAAYEGHANGVSAINTVQSLMGLHADATPWPAVGIKKATTYGGMSGN 766
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A P AL V +I+K + + + GIGG+E+ A +F+ GA+ +QVC+ V
Sbjct: 767 ATRPQALRAVSAISKALPG------FPILGIGGIESADVALQFLHCGASVLQVCSAVQNQ 820
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYF 377
+ L+ LK + + N ++++ G S F
Sbjct: 821 DFTLIDDYITGLKALLYLKNLKQVKNWDGQSPPTF 855
>gi|341874167|gb|EGT30102.1| CBN-DPYD-1 protein [Caenorhabditis brenneri]
Length = 1060
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/336 (38%), Positives = 191/336 (56%), Gaps = 18/336 (5%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
E D+S+ + G++ NPF + S PP T+ + +RAF++GWG ++ KT LD V NV+PR
Sbjct: 545 EVDISVDMCGVKFENPFGLASAPPTTSGPMCRRAFEQGWGFILTKTYGLDKDLVTNVSPR 604
Query: 104 YARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIME 158
R GS G + G + NIELIS++ E L+ ++LK +P KI++ASIM
Sbjct: 605 IVR------GSTSGPLFGPNQGSFMNIELISEKSCEYWLQCIRELKRDHPTKIVVASIMC 658
Query: 159 EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
YNKA W EL + E G D +E+N SCPHGM E+ MG A GQ +++E+C W+ A
Sbjct: 659 TYNKADWVELATKSEAAGADILELNLSCPHGMGEKGMGLACGQSPDIVKEICRWVRACVK 718
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPG 277
+P + KMTPNITD+ E AR A G+ GV+A NT+ S+M + + P +T G
Sbjct: 719 IPFFPKMTPNITDVREIARAARDGGASGVTATNTVSSLMHMKVDGNAWPAIGTGKRTTYG 778
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
G S A+ PIA+ V SIA + + + GG+E+ F+L GA+ +QVC+
Sbjct: 779 GMSGSAIRPIAMKAVSSIANELDG------FPIMATGGIESAETGLGFLLAGASVLQVCS 832
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V + +V+ C LK + + S++D+ G S
Sbjct: 833 AVQNQDFTVVEDYCTGLKALLYLSGAESLKDWDGQS 868
>gi|18858217|ref|NP_572538.1| suppressor of rudimentary, isoform B [Drosophila melanogaster]
gi|24640763|ref|NP_727320.1| suppressor of rudimentary, isoform C [Drosophila melanogaster]
gi|10728539|gb|AAF46461.2| suppressor of rudimentary, isoform B [Drosophila melanogaster]
gi|22831986|gb|AAN09247.1| suppressor of rudimentary, isoform C [Drosophila melanogaster]
gi|24850449|gb|AAN64918.1| dihydropyrimidine dehydrogenase [Drosophila melanogaster]
gi|189181839|gb|ACD81696.1| GH13260p [Drosophila melanogaster]
Length = 1031
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 196/339 (57%), Gaps = 12/339 (3%)
Query: 24 GLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWG 83
GL L + L + +D + D+S+ + G++ NPF + S PP T+ +++RAF++GWG
Sbjct: 507 GLPLDTPAALPLFYTDIDAV--DISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQGWG 564
Query: 84 AVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-WENIELISDRPLETMLKEFKQ 142
VV KT LD V NV+PR +R +G G G + NIELIS++ E LK +
Sbjct: 565 FVVTKTFGLDKDLVTNVSPRI--VRGTTSGYKYGPQQGCFLNIELISEKRAEYWLKSIGE 622
Query: 143 LKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQD 202
LK +P+KI+IASIM +N+ W EL + E++G DA+E+N SCPHGM ER MG A GQD
Sbjct: 623 LKRDFPEKIVIASIMCSFNEEDWTELAIKAEQSGADALELNLSCPHGMGERGMGLACGQD 682
Query: 203 CRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDL- 261
L+E++ W+ +P + K+TPNITDI A A R G++G SAINT+ +MG+
Sbjct: 683 PELVEQISRWVRKAVKLPFFIKLTPNITDIVSIAAAAKRGGADGGSAINTVQGLMGLKAD 742
Query: 262 KTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGD 321
T P E +T GG S A P+AL + IA + + + GIGG+++G
Sbjct: 743 STAWPAIGKEQRTTYGGVSGNATRPMALKAISDIANRVPG------FPILGIGGIDSGEV 796
Query: 322 AAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKM 360
A +FI GA +Q+C+ V + +++ C LK + +
Sbjct: 797 ALQFIHAGATVLQICSSVQNQDFTVIEDYCTALKALLYL 835
>gi|198471457|ref|XP_001355634.2| GA15293 [Drosophila pseudoobscura pseudoobscura]
gi|198145925|gb|EAL32693.2| GA15293 [Drosophila pseudoobscura pseudoobscura]
Length = 1027
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 128/317 (40%), Positives = 188/317 (59%), Gaps = 10/317 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S PP T+ +++RAF++GWG VV KT LD V NV+PR
Sbjct: 525 DISVEMCGLKFENPFGLASAPPTTSTAMIRRAFEQGWGFVVTKTFGLDKDLVTNVSPRI- 583
Query: 106 RLRAGANGSAKGQIIG-WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+R +G G G + NIELIS++ E L+ +LK +P+KI+IASIM +N+A
Sbjct: 584 -VRGTTSGYKYGPQQGCFLNIELISEKRAEYWLRSIGELKRDFPEKIVIASIMCSFNEAD 642
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W EL + E +G DA+E+N SCPHGM ER MG A GQ ++E++ W+ +P + K
Sbjct: 643 WTELSIKAEASGADALELNLSCPHGMGERGMGLACGQIPDMVEQISRWVRNAVKLPFFIK 702
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGYSCKA 283
+TPNITDIT A+ A G++G SAINT+ +MG+ T P E +T GG S A
Sbjct: 703 LTPNITDITAIAKAAKLGGADGCSAINTVQGLMGLKADATAWPAVGEEKRTTYGGVSGNA 762
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
P+AL + IAK + D+ + GIGG+++G A +F+ GA +Q+C+ V
Sbjct: 763 TRPMALRAISEIAKKI------PDFPILGIGGIDSGEVALQFLQAGATVLQICSSVQNQD 816
Query: 344 YGLVKRLCEELKDFMKM 360
+ L+ C LK + +
Sbjct: 817 FTLIDDYCTSLKALLYL 833
>gi|66354366|gb|AAY44826.1| suppressor-of-rudimentary dihydropyrimidine dehydrogenase mutant
[Drosophila melanogaster]
Length = 1031
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 196/339 (57%), Gaps = 12/339 (3%)
Query: 24 GLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWG 83
GL L + L + +D + D+S+ + G++ NPF + S PP T+ +++RAF++GWG
Sbjct: 507 GLPLDTPAALPLFYTDIDAV--DISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQGWG 564
Query: 84 AVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-WENIELISDRPLETMLKEFKQ 142
VV KT LD V NV+PR +R +G G G + NIELIS++ E LK +
Sbjct: 565 FVVTKTFGLDKDLVTNVSPRI--VRGTTSGYKYGPQQGCFLNIELISEKRAEYWLKSIGE 622
Query: 143 LKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQD 202
LK +P+KI+IASIM +N+ W EL + E++G DA+E+N SCPHGM ER MG A GQD
Sbjct: 623 LKRDFPEKIVIASIMCSFNEEDWTELAIKAEQSGADALELNLSCPHGMGERGMGLACGQD 682
Query: 203 CRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDL- 261
L+E++ W+ +P + K+TPNITDI A A R G++G SAINT+ +MG+
Sbjct: 683 PELVEQISRWVRKAVKLPFFIKLTPNITDIVSIAAAAKRGGADGGSAINTVQGLMGLKAD 742
Query: 262 KTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGD 321
T P E +T GG S A P+AL + IA + + + GIGG+++G
Sbjct: 743 STAWPAIGKEQRTTYGGVSGNATRPMALKAISDIANRVPG------FPILGIGGIDSGEV 796
Query: 322 AAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKM 360
A +FI GA +Q+C+ V + +++ C LK + +
Sbjct: 797 ALQFIHAGATVLQICSSVQNQDFTVIEDYCTALKALLYL 835
>gi|16182390|gb|AAL13488.1| GH01650p [Drosophila melanogaster]
Length = 864
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 196/339 (57%), Gaps = 12/339 (3%)
Query: 24 GLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWG 83
GL L + L + +D + D+S+ + G++ NPF + S PP T+ +++RAF++GWG
Sbjct: 340 GLPLDTPAALPLFYTDIDAV--DISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQGWG 397
Query: 84 AVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-WENIELISDRPLETMLKEFKQ 142
VV KT LD V NV+PR +R +G G G + NIELIS++ E LK +
Sbjct: 398 FVVTKTFGLDKDLVTNVSPRI--VRGTTSGYKYGPQQGCFLNIELISEKRAEYWLKSIGE 455
Query: 143 LKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQD 202
LK +P+KI+IASIM +N+ W EL + E++G DA+E+N SCPHGM ER MG A GQD
Sbjct: 456 LKRDFPEKIVIASIMCSFNEEDWTELAIKAEQSGADALELNLSCPHGMGERGMGLACGQD 515
Query: 203 CRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDL- 261
L+E++ W+ +P + K+TPNITDI A A R G++G SAINT+ +MG+
Sbjct: 516 PELVEQISRWVRKAVKLPFFIKLTPNITDIVSIAAAAKRGGADGGSAINTVQGLMGLKAD 575
Query: 262 KTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGD 321
T P E +T GG S A P+AL + IA + + + GIGG+++G
Sbjct: 576 STAWPAIGKEQRTTYGGVSGNATRPMALKAISDIANRVPG------FPILGIGGIDSGEV 629
Query: 322 AAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKM 360
A +FI GA +Q+C+ V + +++ C LK + +
Sbjct: 630 ALQFIHAGATVLQICSSVQNQDFTVIEDYCTALKALLYL 668
>gi|195565891|ref|XP_002106529.1| GD16077 [Drosophila simulans]
gi|194203907|gb|EDX17483.1| GD16077 [Drosophila simulans]
Length = 1031
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 196/339 (57%), Gaps = 12/339 (3%)
Query: 24 GLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWG 83
GL L + L + +D + D+S+ + G++ NPF + S PP T+ +++RAF++GWG
Sbjct: 507 GLPLDTPAALPLFYTDIDAV--DISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQGWG 564
Query: 84 AVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-WENIELISDRPLETMLKEFKQ 142
VV KT LD V NV+PR +R +G G G + NIELIS++ E LK +
Sbjct: 565 FVVTKTFGLDKDLVTNVSPRI--VRGTTSGYKYGPQQGCFLNIELISEKRAEYWLKSIGE 622
Query: 143 LKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQD 202
LK +P+KI+IASIM +N+ W EL + E++G DA+E+N SCPHGM ER MG A GQD
Sbjct: 623 LKRDFPEKIVIASIMCSFNEDDWTELAIKAEQSGADALELNLSCPHGMGERGMGLACGQD 682
Query: 203 CRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDL- 261
L+E++ W+ +P + K+TPNITDI A A R G++G SAINT+ +MG+
Sbjct: 683 PELVEQISRWVRKAVKLPFFIKLTPNITDIVSIAAAAKRGGADGGSAINTVQGLMGLKAD 742
Query: 262 KTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGD 321
T P E +T GG S A P+AL + IA + + + GIGG+++G
Sbjct: 743 STAWPAIGKEQRTTYGGVSGNATRPMALKAISDIANRVPG------FPILGIGGIDSGEV 796
Query: 322 AAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKM 360
A +FI GA +Q+C+ V + +++ C LK + +
Sbjct: 797 ALQFIHAGATVLQICSSVQNQDFTVIEDYCTALKALLYL 835
>gi|365902096|ref|ZP_09439919.1| dihydropyrimidine dehydrogenase subunit B [Lactobacillus
malefermentans KCTC 3548]
Length = 422
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 133/340 (39%), Positives = 192/340 (56%), Gaps = 11/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ G+ NPF++ S P G Y + +AFDEGWG VV KT+ KV V+PR+
Sbjct: 5 DLSVDFLGVHFENPFLLSSSPVGNCYEMCAKAFDEGWGGVVFKTIGPKHFKVDEVSPRFD 64
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L +G++N+E I++ LE L + QLK YP KI+IASIM N+ W
Sbjct: 65 ELTKEGT-----PFVGFKNMEQIAEHSLEENLHDLHQLKQDYPTKIVIASIMGT-NEEDW 118
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E L V E G D IE+N SCP M +MG+ VG + L+++ C + + +P+ AKM
Sbjct: 119 ESLAQLVTEAGSDMIEMNLSCPQ-MTSHEMGSDVGTNPELVKKYCAAVKRGSDLPMMAKM 177
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITD+ A+ ++ G++G++ INT+ SV +DL P V+G S+ G+S KAV
Sbjct: 178 TPNITDMVPAAKASMAGGADGIATINTVKSVANLDLDKKVALPIVDGKSSISGFSGKAVK 237
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + ++ + +SGIGG+ET DAAEFIL+GA T+QV T VM +GY
Sbjct: 238 PIAL----RFLQQLREAAGLEQLPISGIGGIETWQDAAEFILMGATTLQVTTSVMQYGYR 293
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+VK + L +M+ + + G + + EL R
Sbjct: 294 IVKDMKNGLMHYMEDQGVDHLSELVGVANKKIVPVEELNR 333
>gi|13591940|ref|NP_112289.1| dihydropyrimidine dehydrogenase [NADP(+)] [Rattus norvegicus]
gi|81861573|sp|O89000.1|DPYD_RAT RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|3628593|dbj|BAA33218.1| dihydropyrimidine dehydrogenase [Rattus norvegicus]
Length = 1025
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 186/335 (55%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ PNPF + S P T+ +++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLRFPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ +LKA +PD ILIASIM Y
Sbjct: 592 R------GTTSGPLYGPGQSSFLNIELISEKTAAYWCHSVTELKADFPDNILIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ VP
Sbjct: 646 NKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQSVRVP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG--YSTPGG 278
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ P P V +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADG-SPWPSVGSGKRTTYGG 764
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S + PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+
Sbjct: 765 VSGTTIRPIALRAVTAIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSA 818
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ + +++ C LK + + + + D+ G S
Sbjct: 819 IQNQDFTVIEDYCTGLKALLYLKSIEELSDWDGQS 853
>gi|395822002|ref|XP_003784315.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Otolemur
garnettii]
Length = 1014
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 190/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 521 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 580
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 581 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCGY 634
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL + E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 635 NKDDWMELSKQAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 694
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ T P + +T GG
Sbjct: 695 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKSDGTPWPAVGIGKRTTYGGV 754
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 755 SGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 808
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 809 QNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQS 842
>gi|440912381|gb|ELR61952.1| Dihydropyrimidine dehydrogenase [NADP+], partial [Bos grunniens
mutus]
Length = 845
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 191/335 (57%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GW + KT SLD V NV+PR
Sbjct: 455 DISVEMAGLKFTNPFGLASATPTTSSSMIRRAFEAGWAFALTKTFSLDKDIVTNVSPRII 514
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 515 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 568
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
N+ W EL + E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 569 NRNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVRIP 628
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGG 278
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ P P V E +T GG
Sbjct: 629 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADG-TPWPAVGREKRTTYGG 687
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ PIAL V +IA+ + ++ + GG+++ +F+ GA+ +QVC+
Sbjct: 688 VSGTAIRPIALRAVTTIARAL------PEFPILATGGIDSAESGLQFLHGGASVLQVCSA 741
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ + +++ C LK + + + ++D+ G S
Sbjct: 742 IQNQDFTIIQDYCTGLKALLYLKSIEELQDWDGQS 776
>gi|47086253|ref|NP_998058.1| dihydropyrimidine dehydrogenase [NADP(+)] [Danio rerio]
gi|82185925|sp|Q6NYG8.1|DPYD_DANRE RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|42793999|gb|AAH66602.1| Dihydropyrimidine dehydrogenase [Danio rerio]
Length = 1022
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 189/335 (56%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + G++ PNPF + S PP T+ +++RAF++GWG + KT LD V NV+PR
Sbjct: 532 DISVEMCGIKFPNPFGLASAPPTTSAAMIRRAFEQGWGFALTKTFGLDKDLVTNVSPRIV 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G I G + NIELIS++ K +LKA +P I+IASIM Y
Sbjct: 592 R------GTTSGHIFGPGQGSFLNIELISEKTAAYWCKSVAELKADFPKNIIIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
N+A W EL +E+ DA+E+N SCPHGM ER MG A GQD L+ +C W+ ++P
Sbjct: 646 NQADWTELAKMAQESQADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRKATSIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGG 278
+AK+TPN+T+I + A A G++GV+A NT+ +M + P P + +T GG
Sbjct: 706 FFAKLTPNVTNIVDIATAAYEGGADGVTATNTVSGLMALKADA-TPWPGIGRGARTTYGG 764
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+
Sbjct: 765 VSGNAIRPIALRAVSAIARALPG------FPILATGGIDSAESGLQFLHAGASVLQVCSA 818
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V + +++ C LK + + + + D+ G S
Sbjct: 819 VQNQDFTVIEDYCLGLKALLYLKSIEELHDWDGQS 853
>gi|195058500|ref|XP_001995454.1| GH17755 [Drosophila grimshawi]
gi|193896240|gb|EDV95106.1| GH17755 [Drosophila grimshawi]
Length = 1033
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 194/343 (56%), Gaps = 20/343 (5%)
Query: 24 GLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWG 83
GL L + L + +D + D+S+ + GL+ NPF + S PP T+ +++RAF++GWG
Sbjct: 508 GLPLDTPAALPLFHTDIDNV--DISVEMCGLKFENPFGLASAPPTTSAAMIRRAFEQGWG 565
Query: 84 AVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLK 138
VV KT LD V NV+PR R G+ G G + NIELIS++ E L+
Sbjct: 566 FVVTKTFGLDKDMVTNVSPRIVR------GTTSGYRYGPQQNCFLNIELISEKLAEYWLR 619
Query: 139 EFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAA 198
+LK +P+KI+IASIM YN+A W EL + E +G DA+E+N SCPHGM E MG A
Sbjct: 620 SIGELKRDFPEKIIIASIMCSYNEADWTELATKAEASGADALELNLSCPHGMGESGMGLA 679
Query: 199 VGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMG 258
GQ+ +L+ ++ W+ VP + K+TPNITDI AR A G++G SAINT+ +M
Sbjct: 680 CGQEPKLVMDISRWVRKAVKVPFFIKLTPNITDIVSIARAAQLGGADGGSAINTVQGLMS 739
Query: 259 IDLK-TLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVE 317
+ T P E +T GG S A P+AL V IAK + +++ GIGG++
Sbjct: 740 LKADATAWPAIGKEQRTTYGGVSGNATRPMALRAVSEIAKKLPG------FAILGIGGID 793
Query: 318 TGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKM 360
+G A +F+ GA +Q+C+ V + L+ C LK + +
Sbjct: 794 SGEVALQFLQAGATVLQICSSVQNQDFTLIDDYCTSLKTLLYL 836
>gi|363736857|ref|XP_426639.3| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Gallus gallus]
Length = 1025
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 186/335 (55%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ PNPF I S P T+ ++++RAF+ GWG V KT SLD V NV+PR
Sbjct: 532 DISVLMAGLKFPNPFGIASATPATSSSMIRRAFEAGWGFAVTKTFSLDKDIVTNVSPRIV 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G G I G + NIELIS++ K +LK+ +P +ILIASIM Y
Sbjct: 592 R------GVTSGPIYGPGQGSFLNIELISEKTAAYWCKSITELKSDFPKQILIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+K W EL E G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 SKDDWTELSKMAEAAGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG--YSTPGG 278
+AK+TPN+TDI A A G++GV+A NT+ +MG+ P P V +T GG
Sbjct: 706 FFAKLTPNVTDIVNIAVAAQEGGADGVTATNTVSGLMGLKADG-TPWPAVGAGLRTTYGG 764
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+
Sbjct: 765 VSGNAIRPIALRAVSAIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSA 818
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ + ++ C L+ + + + +ED+ G S
Sbjct: 819 IQNQDFTVIDDYCTGLRALLYLKSIEELEDWNGQS 853
>gi|351700457|gb|EHB03376.1| Dihydropyrimidine dehydrogenase [NADP+], partial [Heterocephalus
glaber]
Length = 863
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 188/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF++GWG + KT SLD V NV+PR
Sbjct: 521 DISVEMAGLKFMNPFGLASATPATSTSMIRRAFEDGWGFALTKTFSLDKDIVTNVSPRVI 580
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LK +PD I+IASIM Y
Sbjct: 581 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKTDFPDNIVIASIMCSY 634
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ VP
Sbjct: 635 NKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVRVP 694
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ T P + +T GG
Sbjct: 695 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGIGKQTTYGGV 754
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V SIA+ + + + GG+ + +F+ GA+ +QVC+ +
Sbjct: 755 SGTAIRPIALRAVTSIARALPG------FPILATGGINSAESGLQFLHGGASVLQVCSAI 808
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 809 QNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQS 842
>gi|291398457|ref|XP_002715523.1| PREDICTED: dihydropyrimidine dehydrogenase [Oryctolagus cuniculus]
Length = 1029
Score = 230 bits (587), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 190/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 536 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 595
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +P I+IASIM Y
Sbjct: 596 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPHNIVIASIMCSY 649
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK+ W EL + E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ VP
Sbjct: 650 NKSDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQVP 709
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ T P + +T GG
Sbjct: 710 FFAKLTPNVTDIISIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGIGKRTTYGGV 769
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+ V
Sbjct: 770 SGTAIRPIALRAVTAIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAV 823
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 824 QNQDFTVIEDYCTGLKALLYLKSIEELQDWDGQS 857
>gi|301608531|ref|XP_002933845.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Xenopus
(Silurana) tropicalis]
Length = 898
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 189/335 (56%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + G++ PNPF + S PP T+ +++RAF+ GWG + KT SL+ V NV+PR
Sbjct: 405 DISVEMVGIKFPNPFGLASAPPTTSAPMIRRAFEAGWGFALTKTFSLEKDIVTNVSPRII 464
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G I G + NIELIS++ + +LKA +P ILIASIM Y
Sbjct: 465 R------GTTSGSIYGPGQGSFLNIELISEKTAAYWCQSITELKADFPKNILIASIMCSY 518
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 519 NKDDWTELALMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVKIP 578
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGG 278
+AK+TPN+TD+ + A A G++GV+A NT+ +MG+ P P V +T GG
Sbjct: 579 FFAKLTPNVTDVVKIAMAAQEGGADGVTATNTVSGLMGLKADA-TPWPAVGRGSRTTYGG 637
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+
Sbjct: 638 VSGNAIRPIALRAVSAIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSA 691
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V + +++ C LK + + + ++D+ G S
Sbjct: 692 VQNQDFTVIEDYCTGLKALLYLKSIDELQDWDGQS 726
>gi|148544533|ref|YP_001271903.1| dihydropyrimidine dehydrogenase [Lactobacillus reuteri DSM 20016]
gi|184153896|ref|YP_001842237.1| dihydropyrimidine dehydrogenase [Lactobacillus reuteri JCM 1112]
gi|227363039|ref|ZP_03847176.1| dihydropyrimidine dehydrogenase [Lactobacillus reuteri MM2-3]
gi|325682854|ref|ZP_08162370.1| dihydroorotate dehydrogenase [Lactobacillus reuteri MM4-1A]
gi|148531567|gb|ABQ83566.1| dihydroorotate oxidase B, catalytic subunit [Lactobacillus reuteri
DSM 20016]
gi|183225240|dbj|BAG25757.1| putative oxidoreductase [Lactobacillus reuteri JCM 1112]
gi|227071923|gb|EEI10209.1| dihydropyrimidine dehydrogenase [Lactobacillus reuteri MM2-3]
gi|324977204|gb|EGC14155.1| dihydroorotate dehydrogenase [Lactobacillus reuteri MM4-1A]
Length = 432
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/340 (38%), Positives = 191/340 (56%), Gaps = 11/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ G+ NPF + S P G Y + K A+D GWG +V KT+S K+ V+PR+
Sbjct: 5 DLSVDFLGVHFENPFCLSSSPVGNCYEMCKNAYDAGWGGIVYKTLSPTHFKIDEVSPRFD 64
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L + ++N+E +S+ PLE L + ++LK YP+K+LIASIM E W
Sbjct: 65 EL-----AKEDMHFVAFKNMEQLSEHPLEQDLADMRRLKEEYPNKVLIASIMGE-TLEDW 118
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
L V ETG D IE+NFSCP M MG+ VG + L ++ C + ++PV AKM
Sbjct: 119 TNLAKLVTETGADMIELNFSCPQ-MTSHTMGSDVGTNPELCKKNCEAVKRGTSLPVLAKM 177
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT + + L G++G SAINT+ S++ +DLK P ++G S+ G S KAV
Sbjct: 178 TPNITTMVPVVKACLEGGADGFSAINTVKSIVDVDLKKKVGLPNIDGKSSVSGLSGKAVK 237
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + ++S + +SGIGG+ET DAAEFILLGA T+QV T +M +GY
Sbjct: 238 PIAL----RFLQQLRSAAGLEQLPISGIGGIETWEDAAEFILLGATTLQVTTAIMEYGYR 293
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
++ L L +M+ + ++D G + + +L R
Sbjct: 294 IIDDLTNGLMHYMEEQHVDHLQDLVGLANKNIIPTNQLDR 333
>gi|255524401|ref|ZP_05391358.1| dihydroorotate dehydrogenase family protein [Clostridium
carboxidivorans P7]
gi|296187521|ref|ZP_06855916.1| dihydropyrimidine dehydrogenase [Clostridium carboxidivorans P7]
gi|255511958|gb|EET88241.1| dihydroorotate dehydrogenase family protein [Clostridium
carboxidivorans P7]
gi|296048043|gb|EFG87482.1| dihydropyrimidine dehydrogenase [Clostridium carboxidivorans P7]
Length = 412
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 196/340 (57%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G NY + +A + GWG +V KT +++ K+I V+PR+
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNNYEMCAKALETGWGGIVFKTAAME--KMIEVSPRF- 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
AN IG++N+E +S+ LE L + K+LK YP+K+L+ASIM N+ W
Sbjct: 62 ----DANKKEGTPFIGFKNMEQVSEHSLEQNLADMKKLKENYPNKVLVASIMGS-NEEEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+L V E G D IE NFSCP M MG+ VGQ+ L+++ + +PV AKM
Sbjct: 117 TKLAQLVTEIGADIIECNFSCPQ-MTSHAMGSDVGQNPELVKKYSAAVRRGTHLPVLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI ++ PA ++ G+ G++AINTI + G+DL P V G S+ GYS KAV
Sbjct: 176 TPNIGNMEVPAIASIEGGATGIAAINTIKCITGVDLDKKVGLPIVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +AK E K+ +SGIGG+ET DA EFI+LGA +QV T +M +GY
Sbjct: 236 PIALRFINQLAK----EPKLKNVPISGIGGIETWEDALEFIMLGAANLQVTTAIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+V+ + ++ +M+ + D GA+++ L R
Sbjct: 292 IVEDMISGIQYYMEEKGVEKLSDLVGAALDNMVPAENLDR 331
>gi|296489272|tpg|DAA31385.1| TPA: dihydropyrimidine dehydrogenase [Bos taurus]
Length = 1025
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 190/335 (56%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GW + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFTNPFGLASATPTTSSSMIRRAFEAGWAFALTKTFSLDKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
N+ W EL + E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NRNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVRIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGG 278
+AK+TPN+TDI AR A G+ GV+A NT+ +MG+ P P V E +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKADG-TPWPAVGREKRTTYGG 764
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ PIAL V +IA+ + ++ + GG+++ +F+ GA+ +QVC+
Sbjct: 765 VSGTAIRPIALRAVTTIARAL------PEFPILATGGIDSAESGLQFLHGGASVLQVCSA 818
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ + +++ C LK + + + ++D+ G S
Sbjct: 819 IQNQDFTIIQDYCTGLKALLYLKSIEELQDWDGQS 853
>gi|355684848|gb|AER97536.1| dihydropyrimidine dehydrogenase [Mustela putorius furo]
Length = 812
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 191/336 (56%), Gaps = 22/336 (6%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 319 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 378
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 379 R------GTTSGPLYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 432
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+K W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 433 SKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 492
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGY---STPG 277
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ P P V G+ +T G
Sbjct: 493 FFAKLTPNVTDIASIARAAKEGGADGVTATNTVSGLMGLRADG-TPWPAV-GFGKRTTYG 550
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
G S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+
Sbjct: 551 GVSGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCS 604
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V + +++ C L+ + + + +ED+ G S
Sbjct: 605 AVQNQDFTVIQDYCTGLRALLYLKSIEELEDWDGQS 640
>gi|326925020|ref|XP_003208720.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Meleagris
gallopavo]
Length = 1214
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 187/335 (55%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ PNPF I S P T+ ++++RAF+ GWG V KT SLD V NV+PR
Sbjct: 758 DISVLMAGLKFPNPFGIASATPATSSSMIRRAFEAGWGFAVTKTFSLDKDIVTNVSPRIV 817
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G G I G + NIELIS++ K +LK+ +P +ILIASIM Y
Sbjct: 818 R------GITSGPIYGPGQGSFLNIELISEKTAAYWCKSITELKSDFPKQILIASIMCSY 871
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+K W EL E G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 872 SKDDWTELSKMAEAAGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 931
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG--YSTPGG 278
+AK+TPN+TDI A A G++GV+A NT+ +MG+ P P V +T GG
Sbjct: 932 FFAKLTPNVTDIVNIAMAAQEGGADGVTATNTVSGLMGLKADGT-PWPAVGAGLRTTYGG 990
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ PIAL V +IA+ + + + GG+++ A +F+ GA+ +QVC+
Sbjct: 991 VSGNAIRPIALRAVSAIARALPG------FPILATGGIDSAESALQFLHSGASVLQVCSA 1044
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ + ++ C L+ + +++ + D+ G S
Sbjct: 1045 IQNQDFTVIDDYCSGLRALLYLNSIEELGDWNGQS 1079
>gi|71984108|ref|NP_508927.2| Protein DPYD-1 [Caenorhabditis elegans]
gi|97536128|sp|Q18164.2|DPYD_CAEEL RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|351058264|emb|CCD65682.1| Protein DPYD-1 [Caenorhabditis elegans]
Length = 1059
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/336 (38%), Positives = 190/336 (56%), Gaps = 18/336 (5%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
E D+S+ + G++ NPF + S PP T+ + +RAF++GWG ++ KT LD V NV+PR
Sbjct: 544 EVDISVDMCGVKFENPFGLASAPPTTSGPMCRRAFEQGWGFILTKTYGLDKDLVTNVSPR 603
Query: 104 YARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIME 158
R GS G + G + NIELIS++ E L+ ++LK +P KI+IASIM
Sbjct: 604 IVR------GSTSGPLYGPNQGSFMNIELISEKSCEYWLQCIRELKRDHPTKIVIASIMC 657
Query: 159 EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
YNKA W EL + EE G D +E+N SCPHGM E+ MG A GQ +++E+C W+ A
Sbjct: 658 VYNKADWIELATKSEEAGADILELNLSCPHGMGEKGMGLACGQSPEIVKEICRWVRACVK 717
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPG 277
+P + KMTPNITD+ E AR A G+ GV+A NT+ S+M + P +T G
Sbjct: 718 IPFFPKMTPNITDVREIARAARDGGASGVTATNTVSSLMHMKADGNAWPAIGSTKRTTYG 777
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
G S A+ PIA+ V SIA + + + GG+E+ F++ GA+ +QVC+
Sbjct: 778 GMSGSAIRPIAMKAVSSIANELDG------FPIMATGGIESAETGLGFLMAGASVLQVCS 831
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V + +V C LK + + S++++ G S
Sbjct: 832 AVQNQDFTVVDDYCTGLKALLYLSGAESLKNWDGQS 867
>gi|359413486|ref|ZP_09205951.1| dihydroorotate dehydrogenase family protein [Clostridium sp.
DL-VIII]
gi|357172370|gb|EHJ00545.1| dihydroorotate dehydrogenase family protein [Clostridium sp.
DL-VIII]
Length = 500
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 195/340 (57%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G+ NPF + S G+NY ++ +AFD GW V KT+ + K V+PR+A
Sbjct: 103 DLSIDFCGVHTENPFFLSSSVVGSNYEMVAKAFDMGWAGVAFKTIGMFVPK--EVSPRFA 160
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L IG++NIE ISD LE ++ KQLK YP K+++ASIM + N+ W
Sbjct: 161 ALT-----KENLPFIGFKNIEQISDHTLEENIQFLKQLKKDYPTKVIVASIMGQ-NEEEW 214
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+L + E G D IE NFSCPH M +G+ VGQ+ L+ +P+ AKM
Sbjct: 215 TKLARLMTEAGADIIECNFSCPH-MTGEGLGSDVGQNPELVALYTKATRKGTHLPILAKM 273
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI ++ PA A+++G+ G++AINTI S+M IDL++ P VEG S+ GGYS KAV
Sbjct: 274 TPNIGNMEIPAMAAMKAGATGIAAINTIKSIMNIDLESFESAPNVEGKSSVGGYSGKAVK 333
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + + MK + KD +SG+GG+ET DAAEF+ LG +Q+ T VM +GY
Sbjct: 334 PIALRFIHN----MKVCEDLKDAPISGMGGIETWVDAAEFLALGCENLQITTSVMQYGYR 389
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
++ L +K ++ + S+ + G ++ EL R
Sbjct: 390 IIDDLIGGMKLYLSSQGYKSVGEIIGKALPNIVPADELER 429
>gi|420298974|ref|ZP_14801023.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW09109]
gi|390806669|gb|EIO73571.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW09109]
Length = 380
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/294 (44%), Positives = 179/294 (60%), Gaps = 13/294 (4%)
Query: 76 RAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLET 135
+A+D GWG VV KT+ A V+PR+ L G IG++N+E I++ PLE
Sbjct: 4 KAYDTGWGGVVFKTIGFFIAN--EVSPRFDHLVKEDTG-----FIGFKNMEQIAEHPLEE 56
Query: 136 MLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKM 195
L ++LK YPDK+LIASIM E N+ WEEL V+E G D IE NFSCP M M
Sbjct: 57 NLAALRRLKEDYPDKVLIASIMGE-NEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAM 114
Query: 196 GAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMS 255
G+ VGQ L+E+ C + +T+P+ AKMTPNI D+ E A A R G++G++AINT+ S
Sbjct: 115 GSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKS 174
Query: 256 VMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGG 315
+ IDL P V G S+ GYS KAV PIAL + M++ +D+ +SGIGG
Sbjct: 175 ITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIAL----RFIQQMRTHPELRDFPISGIGG 230
Query: 316 VETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDF 369
+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L ++ F S+++
Sbjct: 231 IETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFDSLQEM 284
>gi|410967804|ref|XP_003990405.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Felis catus]
Length = 1023
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/334 (37%), Positives = 189/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 529 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 588
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 589 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 642
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+K W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 643 SKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 702
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ T P + +T GG
Sbjct: 703 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGIGKRTTYGGV 762
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 763 SGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 816
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 817 QNQDFTVIQDYCTGLKALLYLKSIEELQDWDGQS 850
>gi|323650140|gb|ADX97156.1| dihydropyrimidine dehydrogenase [NADP+] [Perca flavescens]
Length = 619
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 196/341 (57%), Gaps = 21/341 (6%)
Query: 40 SASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVIN 99
SA + D+S+ + G++ PNPF + S PP T+ +++RAF++GWG + KT LD V N
Sbjct: 122 SAIDQVDISVEMCGIKFPNPFGLASAPPTTSTAMIRRAFEQGWGFALTKTFGLDKDLVTN 181
Query: 100 VTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIA 154
V+PR R G+ G + G + NIELIS++ +LK +P+ ++I+
Sbjct: 182 VSPRIVR------GTTSGHLFGPGQGSFLNIELISEKTAAYWCLSVAELKRDFPNNVVIS 235
Query: 155 SIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWIN 214
SIM YNK W EL EE+G DA+E+N SCPHGM ER MG A GQD L+ +C W+
Sbjct: 236 SIMCSYNKEDWTELAKMAEESGADALELNLSCPHGMGERGMGLACGQDPVLVRNICRWVR 295
Query: 215 AKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EG 272
A ++P +AK+TPN+T+I + A+ A G++GV+A NT+ +MG+ P P V +
Sbjct: 296 AAISIPFFAKLTPNVTNIVDIAKAAHEGGADGVTATNTVSGLMGLKADG-SPWPSVGTDK 354
Query: 273 YSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANT 332
+T GG S A+ PIAL V +IAK + + + GG+++ +F+ GA+
Sbjct: 355 RTTYGGVSGNAIRPIALRAVSAIAKAIPG------FPILATGGIDSAESGLQFLHAGASV 408
Query: 333 VQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+QVC+ + + +++ C LK + + + ++D+ G S
Sbjct: 409 LQVCSAIQNQDFTVIEDYCVGLKALLYLKSL-ELKDWDGQS 448
>gi|260821394|ref|XP_002606018.1| hypothetical protein BRAFLDRAFT_129513 [Branchiostoma floridae]
gi|229291355|gb|EEN62028.1| hypothetical protein BRAFLDRAFT_129513 [Branchiostoma floridae]
Length = 1044
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 188/334 (56%), Gaps = 10/334 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ V G++ PNPF + S PP T+ +++RAF+ GWG + KT +LD V NV+PR
Sbjct: 537 DLSVEVCGIRFPNPFGLASAPPTTSAPMIRRAFEVGWGFALTKTFALDKDIVTNVSPRIV 596
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ GQ + NIELIS++ + +LK +PDKI+IASIM YNK W
Sbjct: 597 KGTTSGYHYGPGQG-SFLNIELISEKTAAYWCQTVTELKRDFPDKIVIASIMCSYNKDDW 655
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EL E+ G DA+E+N SCPHGM ER MG A GQD L+ +C W+ + +P +AKM
Sbjct: 656 IELAQMAEKAGSDALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRSAIKIPFFAKM 715
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGGYSCKA 283
TPNITD+T A+ A ++GV+A NT+ +MG+ R P V E +T GG S A
Sbjct: 716 TPNITDVTVIAQAAKEGMADGVTATNTVSGLMGLK-SNARAWPAVGQEMRTTYGGVSGNA 774
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 775 IRPIALRAVSAIARALPG------FPILATGGIDSAEAGLQFLHCGASVLQVCSAIQNQD 828
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYF 377
+ +V+ LK + + + + D+ G S F
Sbjct: 829 FTVVEDYITGLKAMLYLQSLDDLADWDGQSPPTF 862
>gi|350408298|ref|XP_003488363.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Bombus
impatiens]
Length = 1024
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 130/338 (38%), Positives = 188/338 (55%), Gaps = 18/338 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY- 104
D+S+ + GL+ NPF + S PP T T+++RAF+ GW VV KT SLD V NV+PR
Sbjct: 530 DISVEMCGLKFENPFGLASAPPTTCSTMIRRAFEAGWSFVVTKTFSLDKDLVTNVSPRII 589
Query: 105 ----ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
+R G S+ + NIELIS++ K +LK +P KI+IASIM Y
Sbjct: 590 KGTTSRYHYGPEQSS------FLNIELISEKSEAYWCKSITELKKDFPSKIIIASIMCTY 643
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
N+A W EL + E G DA+E+N SCPHGM E MG A GQD L+ + W+ +P
Sbjct: 644 NRADWTELAQKAESAGADALELNLSCPHGMGESGMGLACGQDPELVRNISRWVREAIKIP 703
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+ K+TPNITDI A+ A ++GVSAINT+ S+MG+ T P ++ +T GG
Sbjct: 704 FFVKLTPNITDIVSIAKAAYEGHADGVSAINTVQSLMGLHADATPWPAVGIKKATTYGGM 763
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A P+AL V SI+K N + + GIGG+++ A +F+ GA+ +QVC+ V
Sbjct: 764 SGNATRPLALRAVSSISK------NLPGFPILGIGGIDSADVALQFLHCGASILQVCSAV 817
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYF 377
+ L+ LK + + + ++++ G S F
Sbjct: 818 QNQDFTLIDDYVTGLKALLYLKSLEQVKNWDGQSPPTF 855
>gi|115627904|ref|XP_781238.2| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like
[Strongylocentrotus purpuratus]
Length = 900
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/329 (37%), Positives = 186/329 (56%), Gaps = 8/329 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D S+ + GL+ PNP+ + S PP T+ +++RAF+ GWG V KT SLD V NV+PR
Sbjct: 532 DTSVEICGLKFPNPYGLASAPPTTSAPMIRRAFEAGWGYAVTKTYSLDKDFVTNVSPRIV 591
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R N GQ + NIELIS++ K +LK +PD+I+IASIM +NK W
Sbjct: 592 RGTTSGNVYGPGQG-SFLNIELISEKTAAYWCKIVTELKRDFPDRIVIASIMCSFNKDDW 650
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+L EE G DA+E+N SCPHGM E+ MG A GQD L+ +C W+ A +P +AK+
Sbjct: 651 TKLAKMSEEAGADALELNLSCPHGMGEKGMGLACGQDPELVLNICRWVRAAVKIPFFAKL 710
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKT-LRPEPCVEGYSTPGGYSCKAV 284
TPN+T+I + AR A ++GV+A NT+ +MG+ + P + +T GG S A+
Sbjct: 711 TPNVTNILDIARAAKEGNADGVTATNTVSGLMGLKASSNAWPAVGKQKKTTYGGVSGNAI 770
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA N + + GG+++ A +F+ GA+ VQVC+ + +
Sbjct: 771 RPIALKAVSVIAN------NLPGFPILATGGIDSAESALQFLHAGASAVQVCSAIQNQDF 824
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
L++ LK + +++ + D+ G S
Sbjct: 825 TLIEDYVTGLKALLYLNSLDDLGDWDGQS 853
>gi|359319777|ref|XP_537061.3| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Canis lupus
familiaris]
Length = 1143
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 188/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 649 DISVEMAGLKFLNPFGLASATPATSASMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 708
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +P I+IASIM Y
Sbjct: 709 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPGNIVIASIMCSY 762
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+K W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 763 SKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 822
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ T P +E +T GG
Sbjct: 823 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGIEKRTTYGGV 882
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+ V
Sbjct: 883 SGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAV 936
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + + D+ G S
Sbjct: 937 QNQDFTVIQDYCTGLKALLYLKSIEELRDWDGQS 970
>gi|301758641|ref|XP_002915175.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Ailuropoda
melanoleuca]
Length = 1026
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 191/336 (56%), Gaps = 22/336 (6%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+K W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 SKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGY---STPG 277
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ P P V G+ +T G
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADG-TPWPAV-GFGKRTTYG 763
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
G S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+
Sbjct: 764 GVSGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCS 817
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V + +++ C L+ + + + ++D+ G S
Sbjct: 818 AVQNQDFTVIQDYCTGLRALLYLKSIEELQDWDGQS 853
>gi|194211086|ref|XP_001490668.2| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Equus caballus]
Length = 1080
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 124/329 (37%), Positives = 186/329 (56%), Gaps = 8/329 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 587 DISVEMAGLKFVNPFGLASATPATSASMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 646
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R GQ + NIELIS++ + +LKA +PD I+IASIM YNK W
Sbjct: 647 RGITSGPMYGPGQS-SFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDW 705
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EL + E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ VP +AK+
Sbjct: 706 MELAKQAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVRVPFFAKL 765
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGYSCKAV 284
TPN+TDI AR A G++GV+A NT+ +M + T P + +T GG S A+
Sbjct: 766 TPNVTDIVSIARAAKEGGADGVTATNTVSGLMELKADGTPWPAVGIGKRTTYGGVSGTAI 825
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+ + +
Sbjct: 826 RPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAIQNQDF 879
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+++ C LK + + + ++D+ G S
Sbjct: 880 TVIEDYCTGLKALLYLKSIEELQDWDGQS 908
>gi|281349697|gb|EFB25281.1| hypothetical protein PANDA_003122 [Ailuropoda melanoleuca]
Length = 1009
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 191/336 (56%), Gaps = 22/336 (6%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 519 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 578
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 579 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 632
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+K W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 633 SKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 692
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGY---STPG 277
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ P P V G+ +T G
Sbjct: 693 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADG-TPWPAV-GFGKRTTYG 750
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
G S A+ PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+
Sbjct: 751 GVSGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCS 804
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V + +++ C L+ + + + ++D+ G S
Sbjct: 805 AVQNQDFTVIQDYCTGLRALLYLKSIEELQDWDGQS 840
>gi|390362443|ref|XP_001197282.2| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like
[Strongylocentrotus purpuratus]
Length = 958
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 125/329 (37%), Positives = 186/329 (56%), Gaps = 8/329 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D S+ + GL+ PNP+ + S PP T+ +++RAF+ GWG V KT SLD V NV+PR
Sbjct: 532 DTSVEICGLKFPNPYGLASAPPTTSAPMIRRAFEAGWGYAVTKTYSLDKDFVTNVSPRIV 591
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R N GQ + NIELIS++ K +LK +PD+I+IASIM +NK W
Sbjct: 592 RGTTSGNVYGPGQG-SFLNIELISEKTAAYWCKIVTELKRDFPDRIVIASIMCSFNKDDW 650
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+L EE G DA+E+N SCPHGM E+ MG A GQD L+ +C W+ A +P +AK+
Sbjct: 651 TKLAKMSEEAGADALELNLSCPHGMGEKGMGLACGQDPELVLNICRWVRAAVKIPFFAKL 710
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKT-LRPEPCVEGYSTPGGYSCKAV 284
TPN+T+I + AR A ++GV+A NT+ +MG+ + P + +T GG S A+
Sbjct: 711 TPNVTNILDIARAAKEGNADGVTATNTVSGLMGLKASSNAWPAVGKQKKTTYGGVSGNAI 770
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V IA N + + GG+++ A +F+ GA+ VQVC+ + +
Sbjct: 771 RPIALKAVSVIAN------NLPGFPILATGGIDSAESALQFLHAGASAVQVCSAIQNQDF 824
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
L++ LK + +++ + D+ G S
Sbjct: 825 TLIEDYVTGLKALLYLNSLDDLGDWDGQS 853
>gi|194466721|ref|ZP_03072708.1| dihydroorotate dehydrogenase family protein [Lactobacillus reuteri
100-23]
gi|227543869|ref|ZP_03973918.1| dihydroorotate dehydrogenase family protein [Lactobacillus reuteri
CF48-3A]
gi|338202679|ref|YP_004648824.1| dihydroorotate dehydrogenase [Lactobacillus reuteri SD2112]
gi|157805448|gb|ABV80266.1| dihydropyrimidine dehydrogenase [Lactobacillus reuteri]
gi|194453757|gb|EDX42654.1| dihydroorotate dehydrogenase family protein [Lactobacillus reuteri
100-23]
gi|227186130|gb|EEI66201.1| dihydroorotate dehydrogenase family protein [Lactobacillus reuteri
CF48-3A]
gi|336447919|gb|AEI56534.1| dihydroorotate dehydrogenase [Lactobacillus reuteri SD2112]
Length = 432
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 131/340 (38%), Positives = 190/340 (55%), Gaps = 11/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ G+ NPF + S P G Y + K A+D GWG +V KT+S K+ V+PR+
Sbjct: 5 DLSVDFLGVHFENPFCLSSSPVGNCYEMCKNAYDAGWGGIVYKTLSPTHFKIDEVSPRFD 64
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L + ++N+E +S+ PLE L + ++LK YP+K+LIASIM E W
Sbjct: 65 EL-----AKEDMHFVAFKNMEQLSEHPLEQDLADMRRLKEEYPNKVLIASIMGE-TLEDW 118
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
L V E G D IE+NFSCP M MG+ VG + L ++ C + ++PV AKM
Sbjct: 119 TNLAKLVTEAGADMIELNFSCPQ-MTSHTMGSDVGTNPELCKKNCEAVKRGTSLPVLAKM 177
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT + + L G++G SAINT+ S++ +DLK P ++G S+ G S KAV
Sbjct: 178 TPNITTMVPVVKACLEGGADGFSAINTVKSIVDVDLKKKVGLPNIDGKSSVSGLSGKAVK 237
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + ++S + +SGIGG+ET DAAEFILLGA T+QV T +M +GY
Sbjct: 238 PIAL----RFLQQLRSAAGLEQLPISGIGGIETWEDAAEFILLGATTLQVTTAIMEYGYR 293
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
++ L L +M+ + ++D G + + +L R
Sbjct: 294 IIDDLTNGLMHYMEEQHVDHLQDLVGLANKNIIPTNQLDR 333
>gi|13399647|pdb|1H7W|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
gi|13399648|pdb|1H7W|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
gi|13399649|pdb|1H7W|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
gi|13399650|pdb|1H7W|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
gi|20663633|pdb|1GT8|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
gi|20663634|pdb|1GT8|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
gi|20663635|pdb|1GT8|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
gi|20663636|pdb|1GT8|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
gi|20663641|pdb|1GTE|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
gi|20663642|pdb|1GTE|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
gi|20663643|pdb|1GTE|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
gi|20663644|pdb|1GTE|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
gi|20663675|pdb|1GTH|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
gi|20663676|pdb|1GTH|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
gi|20663677|pdb|1GTH|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
gi|20663678|pdb|1GTH|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
Length = 1025
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 189/335 (56%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIV 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL + E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG--YSTPGG 278
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ P P V +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADG-TPWPAVGAGKRTTYGG 764
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+
Sbjct: 765 VSGTAIRPIALRAVTTIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSA 818
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V + +++ C LK + + + ++ + G S
Sbjct: 819 VQNQDFTVIQDYCTGLKALLYLKSIEELQGWDGQS 853
>gi|47522904|ref|NP_999209.1| dihydropyrimidine dehydrogenase [NADP(+)] precursor [Sus scrofa]
gi|2498311|sp|Q28943.1|DPYD_PIG RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil
dehydrogenase; Flags: Precursor
gi|558307|gb|AAA57475.1| dihydropyrimidine dehydrogenase [Sus scrofa]
Length = 1025
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 189/335 (56%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIV 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL + E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG--YSTPGG 278
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ P P V +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADG-TPWPAVGAGKRTTYGG 764
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+
Sbjct: 765 VSGTAIRPIALRAVTTIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSA 818
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V + +++ C LK + + + ++ + G S
Sbjct: 819 VQNQDFTVIQDYCTGLKALLYLKSIEELQGWDGQS 853
>gi|28210533|ref|NP_781477.1| dihydropyrimidine dehydrogenase [Clostridium tetani E88]
gi|28202970|gb|AAO35414.1| oxidoreductase iron-sulfur protein [Clostridium tetani E88]
Length = 411
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 135/340 (39%), Positives = 197/340 (57%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G NY + +A + GWG VV KT+ + V+PR+
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGHNYEMCAKALETGWGGVVFKTIGFYLPE--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
LR + +G++N+E I++ PLE L++ +++K YP K+LIASIM E N+ W
Sbjct: 63 NLRKEST-----SFLGFKNMEQIAEYPLEYNLEQIRKIKKNYPSKVLIASIMGE-NEKEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EL V E G D IE N+SCP M MG+ VGQ L+++ + +P+ AKM
Sbjct: 117 TELAKMVTEAGADIIECNYSCPQ-MASGAMGSDVGQSPELVKKYSRATRKGSKLPILAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI + PA ++ G+ G++AINTI + GI+L P V G S+ GYS KA+
Sbjct: 176 TPNIGHMEIPAIASIEGGATGIAAINTIKCITGINLDNQISLPIVNGKSSISGYSGKAIK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL IA+M ++E K +SGIGG+ET DA EFI+LGA VQV T +M +GY
Sbjct: 236 PIAL---RFIAQMSQNE-KLKGVPISGIGGIETWEDALEFIMLGARNVQVTTAIMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+VK + + + +M+ F+++E+ G ++ EL R
Sbjct: 292 IVKDMIKGVSYYMEEKGFNNLEELVGIALNNLIPAEELDR 331
>gi|348531404|ref|XP_003453199.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like
[Oreochromis niloticus]
Length = 1021
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 195/341 (57%), Gaps = 21/341 (6%)
Query: 40 SASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVIN 99
SA + D+SI V G++ PNPF + S PP T+ +++RAF++GWG + KT LD V N
Sbjct: 523 SAIDQVDISIEVCGIKFPNPFGLASAPPTTSTAMIRRAFEQGWGFALTKTFGLDKDLVTN 582
Query: 100 VTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIA 154
V+PR R G+ G + G + NIELIS++ + +LK +P+ ++I+
Sbjct: 583 VSPRIVR------GTTSGPLYGPGLGSFLNIELISEKTAAYWCQSVAELKKDFPNNVVIS 636
Query: 155 SIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWIN 214
SIM YNK W EL EE+G DA+E+N SCPHGM ER MG A GQD L+ +C W+
Sbjct: 637 SIMCGYNKEDWTELAKMAEESGADALELNLSCPHGMGERGMGLACGQDPVLVRNICRWVR 696
Query: 215 AKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EG 272
++P +AK+TPN+T+I + A+ A G++GV+A NT+ +MG+ P P V E
Sbjct: 697 EAISIPFFAKLTPNVTNIVDIAKAAHEGGADGVTATNTVSGLMGLKADG-SPWPSVGLEK 755
Query: 273 YSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANT 332
+T GG S A+ PI L V +IA+ + + + GG+++ +F+ GA+
Sbjct: 756 RTTYGGISGNAIRPITLRAVSAIARAIPG------FPILATGGIDSAESGLQFLHAGASL 809
Query: 333 VQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+QVC+ V + L++ C LK + + + ++D+ G S
Sbjct: 810 LQVCSAVQNQDFTLIEDYCVGLKALLYLKSL-ELKDWDGQS 849
>gi|423720340|ref|ZP_17694522.1| dihydropyrimidine dehydrogenase subunit B, FMN-binding protein
[Geobacillus thermoglucosidans TNO-09.020]
gi|383366677|gb|EID43964.1| dihydropyrimidine dehydrogenase subunit B, FMN-binding protein
[Geobacillus thermoglucosidans TNO-09.020]
Length = 421
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 187/340 (55%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G+ NPF + S P N ++ +AFD GWG + KTV + +PR+
Sbjct: 5 DLSIDFLGVHCENPFFLSSSPVCNNAEMVAKAFDAGWGGIFYKTVGIKGMD--ECSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L + A G++N+E IS+ +E L+E K+LK YP+K++ SIM N+ W
Sbjct: 63 ILTKESTPWA-----GFKNMEQISEMSMEQNLEEIKKLKKNYPNKVIGVSIMGS-NEEEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
L V E G D +E+NFSCP M MGA VGQ+ L+ + C + +PV AKM
Sbjct: 117 ITLAKAVTEAGADILELNFSCPQ-MTSHAMGADVGQNPELVRKYCKAVVENTHLPVVAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT + EPA A + G+ G+SAINTI S+ IDL L P V G S+ GYS KA+
Sbjct: 176 TPNITRMEEPAIAAAQGGAHGISAINTIKSITNIDLDILTGRPVVNGKSSISGYSGKAIK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +AK + K LSGIGG+ET DA EFILLG VQV T VM +GY
Sbjct: 236 PIALRFIAELAKCKEL----KSVQLSGIGGIETWQDALEFILLGCRNVQVTTAVMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+V+ L + FM + +++ G ++ EL R
Sbjct: 292 IVEDLISGISHFMDERGVNKLDELVGLALNNIVPAEELDR 331
>gi|27806651|ref|NP_776466.1| dihydropyrimidine dehydrogenase [NADP(+)] [Bos taurus]
gi|2498309|sp|Q28007.1|DPYD_BOVIN RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|677951|gb|AAB40985.1| dihydropyrimidine dehydrogenase [Bos taurus]
Length = 1025
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 189/335 (56%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + L+ NPF + S P T+ ++++RAF+ GW + KT SLD V NV+PR
Sbjct: 532 DISVEMAALKFTNPFGLASATPTTSSSMIRRAFEAGWAFALTKTFSLDKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
N+ W EL + E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NRNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVRIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGG 278
+AK+TPN+TDI AR A G+ GV+A NT+ +MG+ P P V E +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGANGVTATNTVSGLMGLKADG-TPWPAVGREKRTTYGG 764
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ PIAL V +IA+ + ++ + GG+++ +F+ GA+ +QVC+
Sbjct: 765 VSGTAIRPIALRAVTTIARAL------PEFPILATGGIDSAESGLQFLHGGASVLQVCSA 818
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ + +++ C LK + + + ++D+ G S
Sbjct: 819 IQNQDFTIIQDYCTGLKALLYLKSIEELQDWDGQS 853
>gi|224057361|ref|XP_002188844.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Taeniopygia
guttata]
Length = 1162
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 190/335 (56%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ PNPF + S P T+ ++++RAF+ GWG V KT SLD V NV+PR
Sbjct: 669 DISVEMAGLKFPNPFGLASATPTTSSSMIRRAFEAGWGFAVTKTFSLDKDIVTNVSPRIV 728
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ K +LKA +P+ +LIASIM Y
Sbjct: 729 R------GTTSGPLYGPGQGSFLNIELISEKTAAYWCKSIAELKADFPNHVLIASIMCSY 782
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
++ W EL + G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 783 SREDWTELSKMAQVAGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVHIP 842
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV-EGY-STPGG 278
+AK+TPN+TDI + A A G++GV+A NT+ +MG+ + P P V G +T GG
Sbjct: 843 FFAKLTPNVTDIVKIAMAAQEGGADGVTATNTVSGLMGLKADS-TPWPAVGRGLRTTYGG 901
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+
Sbjct: 902 MSGNAIRPIALRAVSAIARALPG------FPILATGGIDSAEAGLQFLHSGASVLQVCSA 955
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ + ++ C L+ + + + +ED+ G S
Sbjct: 956 IQNQDFTVIDDYCTGLQALLYLKSIEELEDWNGQS 990
>gi|312111355|ref|YP_003989671.1| dihydroorotate dehydrogenase [Geobacillus sp. Y4.1MC1]
gi|336235800|ref|YP_004588416.1| dihydroorotate dehydrogenase family protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311216456|gb|ADP75060.1| dihydroorotate dehydrogenase family protein [Geobacillus sp.
Y4.1MC1]
gi|335362655|gb|AEH48335.1| dihydroorotate dehydrogenase family protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 422
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 187/340 (55%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G+ NPF + S P N ++ +AFD GWG + KTV + +PR+
Sbjct: 6 DLSIDFLGVHCENPFFLSSSPVCNNAEMVAKAFDAGWGGIFYKTVGIKGMD--ECSPRFD 63
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L + A G++N+E IS+ +E L+E K+LK YP+K++ SIM N+ W
Sbjct: 64 ILTKESTPWA-----GFKNMEQISEMSMEQNLEEIKKLKKNYPNKVIGVSIMGS-NEEEW 117
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
L V E G D +E+NFSCP M MGA VGQ+ L+ + C + +PV AKM
Sbjct: 118 ITLAKAVTEAGADILELNFSCPQ-MTSHAMGADVGQNPELVRKYCKAVVENTHLPVVAKM 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT + EPA A + G+ G+SAINTI S+ IDL L P V G S+ GYS KA+
Sbjct: 177 TPNITRMEEPAIAAAQGGAHGISAINTIKSITNIDLDILTGRPVVNGKSSISGYSGKAIK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +AK + K LSGIGG+ET DA EFILLG VQV T VM +GY
Sbjct: 237 PIALRFIAELAKCKEL----KSVQLSGIGGIETWQDALEFILLGCRNVQVTTAVMQYGYR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+V+ L + FM + +++ G ++ EL R
Sbjct: 293 IVEDLISGISHFMDERGVNKLDELVGLALNNIVPAEELDR 332
>gi|340374761|ref|XP_003385906.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+] [Amphimedon
queenslandica]
Length = 1027
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 124/333 (37%), Positives = 187/333 (56%), Gaps = 20/333 (6%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+SI GL+ NPF + S P T+ +++RAF+ GW V KT +LD + NV+PR
Sbjct: 534 DVSIEFAGLKFENPFGLASATPTTSSAMIRRAFEAGWAFAVTKTYTLDKDIITNVSPRIV 593
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIEL+S++ L+ ++LK +P+KI+IAS+M +
Sbjct: 594 R------GTTSGHLFGPGQNAYLNIELVSEKTCAYWLQSIRELKRDFPNKIVIASVMCGF 647
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+K W L EE G DA+E+N SCPHGM ER MG A GQD L+ E+C W+ +P
Sbjct: 648 SKEDWTILCKASEEAGADALELNLSCPHGMGERGMGLACGQDPELVVEICCWVREAVKIP 707
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGG 278
+AKMTPN+TDI + AR + G+ GV+AINT+ +MG+ + P P V E +T GG
Sbjct: 708 FFAKMTPNVTDIVDIARASQEGGATGVTAINTVSGLMGVKANGI-PWPAVGNENRTTYGG 766
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ PIAL V +IA+ + + + GG+++ +F+ GA +QVC+
Sbjct: 767 VSGNAIRPIALRDVSAIARALPG------FPILAAGGIDSAEAGLQFLHCGATLLQVCSA 820
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ Y L+ LK + + + S + D+ G
Sbjct: 821 IHNQEYTLIDDYVTGLKALLYLQSVSELGDWDG 853
>gi|410724454|ref|ZP_11363645.1| dihydroorotate dehydrogenase family protein [Clostridium sp.
Maddingley MBC34-26]
gi|410602154|gb|EKQ56642.1| dihydroorotate dehydrogenase family protein [Clostridium sp.
Maddingley MBC34-26]
Length = 500
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 134/342 (39%), Positives = 194/342 (56%), Gaps = 13/342 (3%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
E DLSI G NPF + S G+NY ++ +AF+ GW V KT+ + K V+PR
Sbjct: 101 EVDLSIDFCGANCENPFFLSSSVVGSNYEMVAKAFEMGWAGVAFKTIGMFVPK--EVSPR 158
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+A L IG++NIE ISD LE + K+LK YP KI++ASIM + N
Sbjct: 159 FATLT-----KENLPFIGFKNIEQISDHTLEENIDFIKKLKENYPTKIIVASIMGQ-NDE 212
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
W +L + E G D IE NFSCPH M +G+ VGQ+ L+ + +P+ A
Sbjct: 213 EWTKLAKLMTEAGADIIECNFSCPH-MTGEGLGSDVGQNPELVAQYTKATRKGTNLPILA 271
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
KMTPNI ++ PA A++SG+ G++AINTI S+M ++L++ EP VEG ++ GGYS KA
Sbjct: 272 KMTPNIGNMEIPAMAAMKSGATGIAAINTIKSIMNVNLESFASEPNVEGKTSVGGYSGKA 331
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
V PIAL + MK+ + K +SG+GG+ET DAAEF+ LG +Q+ T VM +G
Sbjct: 332 VKPIALRFIHD----MKNCEDLKSAPISGMGGIETWKDAAEFLALGCENLQITTSVMQYG 387
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
Y ++ L +K ++ + +I D G ++ +L R
Sbjct: 388 YRVIDDLISGMKLYLSSQGYKNISDIIGKALPNIVPADKLER 429
>gi|339441394|ref|YP_004707399.1| hypothetical protein CXIVA_03300 [Clostridium sp. SY8519]
gi|338900795|dbj|BAK46297.1| hypothetical protein CXIVA_03300 [Clostridium sp. SY8519]
Length = 504
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 203/341 (59%), Gaps = 13/341 (3%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
PDLSIT G++ NPF++ S G+N ++ +AFD GW V KT+ + + +PR+
Sbjct: 105 PDLSITSMGVRFENPFLLSSSVVGSNEEMIAKAFDMGWAGVAGKTIGMFTPQ--EASPRF 162
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ LR +N +G++NIE IS PLE L + LK YP+K+ +ASIM ++A
Sbjct: 163 SALRKESN-----PFVGFKNIEQISTHPLEENLMYIRHLKKRYPEKVFLASIMGS-SEAE 216
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W EL RVE+ G D IE NFSCP + E ++G+ VG D RL+ + ++P+ AK
Sbjct: 217 WTELAARVEDAGADLIECNFSCPQMVGE-QLGSDVGTDPRLVYTFTQAVRRGTSLPILAK 275
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
MTPNITD+T A+ A+ G++G++AINTI SVM +DL + EP V G S GGYS KAV
Sbjct: 276 MTPNITDMTVAAKAAVGGGADGIAAINTIKSVMNVDLDSFASEPDVGGRSCVGGYSGKAV 335
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL + +AK + +SG+GG+ET DAAEF+ G +TVQ+ T VM +GY
Sbjct: 336 KPIALRFITDLAK----DPELCSVPISGMGGIETWRDAAEFLACGCDTVQITTAVMQYGY 391
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+++ L + + +++ SS+ D G +++ L R
Sbjct: 392 RIIEDLLDGMIRYLQRTGISSVRDLVGKALDEVVPTDALDR 432
>gi|167748210|ref|ZP_02420337.1| hypothetical protein ANACAC_02954 [Anaerostipes caccae DSM 14662]
gi|167652202|gb|EDR96331.1| dihydropyrimidine dehydrogenase [Anaerostipes caccae DSM 14662]
Length = 431
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 187/333 (56%), Gaps = 13/333 (3%)
Query: 42 SAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT 101
S + DLSI G++ NPF + S P G+NY + +A + GW V KT+ +
Sbjct: 15 SVKKDLSIDFLGVKCENPFFLSSSPVGSNYEMCAKALEAGWAGVYYKTIGI-------FI 67
Query: 102 PRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYN 161
P R G++N+E+ISD+PLE L+ ++LK YP K+++ASIM N
Sbjct: 68 PNECSPRFDITSKEGTPWTGFKNMEMISDKPLEDNLEYMRRLKQDYPTKVIVASIMGS-N 126
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
+ WE L +V E G+D IE NFSCP M MG+ VGQ+ L+ C ++ +PV
Sbjct: 127 EEEWEILAKKVTEAGVDMIECNFSCPQ-MTSSAMGSDVGQNPDLVRRYCEVVSGATHLPV 185
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
AKMTPNI ++ PA A+ G++G++AINT+ ++ ID++ + P V G S+ GYS
Sbjct: 186 IAKMTPNIGNMEIPAIAAMEGGAKGIAAINTVKAITNIDVENMTAMPVVNGKSSISGYSG 245
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV PIAL MK KD ++GIGG+ET DA +FIL+G++ +QV T VM
Sbjct: 246 AAVKPIAL----RFITQMKQHPELKDVPITGIGGIETWKDALDFILVGSSNLQVTTSVMQ 301
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+GY +V+ + L FM+ H + D G ++
Sbjct: 302 YGYRIVEDMISGLSHFMEDHGIDKLSDLVGVAL 334
>gi|307201146|gb|EFN81057.1| Dihydropyrimidine dehydrogenase [NADP+] [Harpegnathos saltator]
Length = 962
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 190/339 (56%), Gaps = 9/339 (2%)
Query: 40 SASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVIN 99
+A E DLS+ + G++ NPF + S PP T+ +++RAF+ GW V KT SLD V N
Sbjct: 488 TAIDEVDLSVEMCGMRFENPFGLASAPPCTSSAMIRRAFEAGWAFAVTKTFSLDKDLVTN 547
Query: 100 VTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEE 159
V+PR + + GQ + NIELIS++ + +LK +P KI+IASIM
Sbjct: 548 VSPRIVKGTTPGHYYGPGQS-SFLNIELISEKTADYWCGSITELKRDFPTKIVIASIMCT 606
Query: 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219
YNKA W EL + E G DA+E+N SCPHGM E MG A GQD L+ + W+ +
Sbjct: 607 YNKADWTELARKAEVAGSDALELNLSCPHGMGESGMGLACGQDSELVRNISRWVREAIKI 666
Query: 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG-YSTPGG 278
P + K+TPNITDI A+ A ++GVSAINT+ +MG+ T P P V+ ++T GG
Sbjct: 667 PFFVKLTPNITDIVSIAKAAYEGKADGVSAINTVQGLMGLR-STGIPWPAVDSKFTTYGG 725
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A P AL V +I+K + +S+ GIGG+++ A +F+ GA+ +Q+ +
Sbjct: 726 VSGNATRPQALRAVSTISKQLPG------FSILGIGGIDSADVALQFLHCGASVIQIGSA 779
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYF 377
+ + L+ LK + + + + I+D+ G S F
Sbjct: 780 IQNQDFTLIDDYVTGLKTLLYLKSLAHIKDWDGQSPPTF 818
>gi|348586489|ref|XP_003479001.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Cavia
porcellus]
Length = 1019
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 186/334 (55%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ + GL+ NPF + S P T+ ++++RAF+ GW + KT SLD V NV+PR
Sbjct: 526 DLSVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWAFALTKTFSLDKDIVTNVSPRII 585
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 586 R------GITSGPLYGPGQSSFLNIELISEKTAAYWCQSVAELKADFPDNIVIASIMCSY 639
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ VP
Sbjct: 640 NKNDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQVP 699
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ T P + +T GG
Sbjct: 700 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGIGKRTTYGGV 759
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S + PIAL V SIA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 760 SGTTIRPIALRAVTSIARALPG------FPILATGGIDSAESGLQFLHGGASVLQVCSAI 813
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 814 QNQDFTVIEDYCTGLKALLYLMSIEELQDWDGQS 847
>gi|426216018|ref|XP_004002266.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Ovis aries]
Length = 1025
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 189/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GW + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFANPFGLASATPTTSSSMIRRAFEAGWAFALTKTFSLDKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
N+ W EL + E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NRNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVRIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ T P + +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGLGKRTTYGGV 765
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 766 SGIAIRPIALRAVTTIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSAI 819
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 820 QNQDFTVIQDYCTGLKALLYLKSIEELQDWDGQS 853
>gi|237748005|ref|ZP_04578485.1| oxidoreductase iron-sulfur protein [Oxalobacter formigenes OXCC13]
gi|229379367|gb|EEO29458.1| oxidoreductase iron-sulfur protein [Oxalobacter formigenes OXCC13]
Length = 415
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/357 (37%), Positives = 190/357 (53%), Gaps = 15/357 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G+ NPF + S P ++Y ++ +AF+ GWG V KTV + P
Sbjct: 4 DLSIDFLGVHCENPFFLSSSPVDSDYEMVAKAFESGWGGVAYKTVGI-------FLPDEC 56
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R G G G++N+E+ISD+PLE LK +LK YP K++IASIM N W
Sbjct: 57 SPRFDITGHPGGAWAGFKNMEMISDKPLEVNLKNMARLKREYPHKVMIASIMGS-NDDEW 115
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
L +V + G D IE NFSCP M MG+ VGQ L+ + + +PV AKM
Sbjct: 116 RTLAQKVTDIGADIIECNFSCPQ-MTSSTMGSDVGQSPELVAQYTEAVCRATRLPVLAKM 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI + PA A+ +G++G++AINT+ ++ +DL+ L P P V G S+ GYS A+
Sbjct: 175 TPNIGHMEIPAIAAIHAGAKGIAAINTVKAITNLDLECLSPMPVVNGKSSISGYSGPAIK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL MK KD +SGIGG+ T D EF+L+G++T+QV T VM +GY
Sbjct: 235 PIAL----RFIAQMKQHPQLKDIPVSGIGGIVTWQDVLEFLLVGSSTIQVTTAVMEYGYR 290
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR--MQQEAIQQRKAVRKG 400
+V+ + L FM+ + D G ++ +L R M I Q K + G
Sbjct: 291 IVEDMASGLSHFMEEKGIEKLSDLVGKALPNIVAADDLDRDFMVIPGIDQTKCIGCG 347
>gi|242017470|ref|XP_002429211.1| Dihydropyrimidine dehydrogenase, putative [Pediculus humanus
corporis]
gi|212514100|gb|EEB16473.1| Dihydropyrimidine dehydrogenase, putative [Pediculus humanus
corporis]
Length = 1015
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/331 (37%), Positives = 188/331 (56%), Gaps = 12/331 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI V ++ NPF + S PP T+ ++++RAF+ GWG VV KT LD INV+PR
Sbjct: 528 DLSIDVCNIKFENPFGLASAPPTTSSSMIRRAFEAGWGFVVTKTFCLDKDLGINVSPRIV 587
Query: 106 RLRAGAN--GSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ N G +G + NIE+IS++ + K ++LK +P KILIASIM Y++
Sbjct: 588 KGTTSKNHYGPEQGSFL---NIEIISEKSEKYWCKSIRELKRDFPTKILIASIMCSYDRD 644
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
W EL + EE+G DA+E+N SCPHGM ER MG A GQD L++ + W+ + +P +
Sbjct: 645 DWTELSKKAEESGADALELNLSCPHGMGERGMGLACGQDPELVQNISEWVRSAIKIPFFV 704
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGYSCK 282
K+TPN+TDI E AR A + GVSAINT+ +MG+ + T P V +T GG S
Sbjct: 705 KLTPNVTDIVEIARAAYEGKANGVSAINTVSGLMGVKVNATPWPSVGVALRTTYGGTSGN 764
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ P+ L V +I+K + + + G+GG+++ +F+ GA +QVC+ V
Sbjct: 765 AIRPMGLKAVSAISKALPG------FPILGMGGIDSAEAGLQFLQCGATLLQVCSAVQNQ 818
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ ++ LK + + + + + G S
Sbjct: 819 DFTVIDDYVTGLKALLYLRSIDELSHWDGQS 849
>gi|317132141|ref|YP_004091455.1| dihydroorotate dehydrogenase family protein [Ethanoligenens
harbinense YUAN-3]
gi|315470120|gb|ADU26724.1| dihydroorotate dehydrogenase family protein [Ethanoligenens
harbinense YUAN-3]
Length = 401
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 193/340 (56%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G+ NPF + S NY + RA + GWG +V KT+ A V+PR+
Sbjct: 4 DLSITFCGVPCENPFFLSSSCVAGNYEMCARALEAGWGGIVFKTIGFYQAN--EVSPRFD 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G G A G G+ N+E ISD PLE + ++LK YP K+L+ASIM E + W
Sbjct: 62 TLSHG--GVAFG---GFRNLEQISDHPLEENMDVLRRLKQAYPQKVLVASIMGE-TEEEW 115
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+L E+ G+D +E NFSCP M + MG+ VGQ L+E C + +PV AKM
Sbjct: 116 TKLARLAEQVGVDMLECNFSCPQ-MTKSTMGSDVGQSKELVETYCRAVRKGTKLPVLAKM 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI ++ A A+R G++G++AINTI S+ +D++ P V+G S+ GYS +AV
Sbjct: 175 TPNIGNMEPVAIAAMRGGADGIAAINTIKSITRLDVEHFSAYPDVDGQSSVSGYSGEAVR 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +AK + + + +SGIGG+ET DA EF LLGA VQV T VM +GY
Sbjct: 235 PIALRFIHDLAKHPQLQ----NVPISGIGGIETWRDALEFFLLGARNVQVTTAVMEYGYR 290
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+V + + L +M+ +++ G ++ + + L R
Sbjct: 291 IVDDMRDGLAAYMENKGIRHLDELVGRALPHLVPSSALRR 330
>gi|417334902|ref|ZP_12117934.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Alachua str. R6-377]
gi|353573376|gb|EHC36754.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Alachua str. R6-377]
Length = 380
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 180/296 (60%), Gaps = 13/296 (4%)
Query: 76 RAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLET 135
+A+D GWG +V KT+ A V+PR+ L G IG++N+E I++ PLE
Sbjct: 4 KAYDTGWGGIVFKTIGFFIAN--EVSPRFDHLTKEDTG-----FIGFKNMEQIAEHPLEE 56
Query: 136 MLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKM 195
L ++LK YPDK+LIASIM E N+ W+EL VEE G D IE NFSCP M M
Sbjct: 57 NLAAIRRLKQDYPDKVLIASIMGE-NEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAM 114
Query: 196 GAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMS 255
G+ VGQ L+E+ C + +++P+ AKMTPNI D+ E A A R G++G++ INT+ S
Sbjct: 115 GSDVGQSPELVEKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKS 174
Query: 256 VMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGG 315
+ IDL P V G S+ GYS KAV PIAL + + M E +D+ +SGIGG
Sbjct: 175 ITNIDLNRKIGMPVVNGKSSISGYSGKAVKPIALRFIQQL--RMHPEL--RDFPISGIGG 230
Query: 316 VETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L ++ F+S+++ G
Sbjct: 231 IETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFASLQEMIG 286
>gi|375002011|ref|ZP_09726351.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353076699|gb|EHB42459.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
Length = 380
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 180/296 (60%), Gaps = 13/296 (4%)
Query: 76 RAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLET 135
+A+D GWG +V KT+ A V+PR+ L G IG++N+E I++ PLE
Sbjct: 4 KAYDTGWGGIVFKTIGFFIAN--EVSPRFDHLTKEDTG-----FIGFKNMEQIAEHPLEE 56
Query: 136 MLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKM 195
L ++LK YPDK+LIASIM E N+ W+EL VEE G D IE NFSCP M M
Sbjct: 57 NLAAIRRLKQDYPDKVLIASIMGE-NEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAM 114
Query: 196 GAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMS 255
G+ VGQ L+E+ C + +++P+ AKMTPNI D+ E A A R G++G++ INT+ S
Sbjct: 115 GSDVGQSPELVEKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKS 174
Query: 256 VMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGG 315
+ IDL P V G S+ GYS KAV PIAL + + M E +D+ +SGIGG
Sbjct: 175 ITNIDLNRKIGMPVVNGKSSISGYSGKAVKPIALRFIQQL--RMHPEL--RDFPISGIGG 230
Query: 316 VETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L ++ F+S+++ G
Sbjct: 231 IETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFASLQEMIG 286
>gi|331269853|ref|YP_004396345.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
BKT015925]
gi|329126403|gb|AEB76348.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
BKT015925]
Length = 411
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 196/340 (57%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G Y + +A + GWG +V KT+ + K V+PR+
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALEIGWGGIVFKTIGFFSPK--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L+ + +G++N+E I++ LE L+ ++LK YP K+L+ASIM + N++ W
Sbjct: 63 NLKKEST-----PFLGFKNMEQIAEHSLEENLESMRKLKEDYPSKVLVASIMGQ-NESEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
L + V E G D IE NFSCP M MG+ VGQ+ L+++ C + +P+ AKM
Sbjct: 117 TRLAELVTEIGADIIECNFSCPQ-MTSHDMGSDVGQNPELVKKYCQAVRKGTHLPILAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI ++T PA ++ G+ G++ INTI + GI+L + P + G S+ GYS KAV
Sbjct: 176 TPNIGNMTIPAIASIEGGATGIATINTIKCISGINLDNMVGLPVINGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +K+ K+ +SGIGG+ET DA EFILLG+ +Q+ T VM +GY
Sbjct: 236 PIALRFIHE----LKTNEELKNIPVSGIGGIETWEDAVEFILLGSTNLQITTSVMQYGYR 291
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+V+ + + +MK F +ED G +++ +L R
Sbjct: 292 IVEDMISGVSYYMKEKGFQKLEDMVGLALKNIIPAEKLDR 331
>gi|417405617|gb|JAA49516.1| Putative dihydropyrimidine dehydrogenase [Desmodus rotundus]
Length = 1025
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 185/335 (55%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ V GL+ NPF + S P T+ +++RAF+ GW + KT SLD V NV+PR
Sbjct: 532 DLSVEVAGLKFANPFGLASATPSTSAAMIRRAFEAGWAFALTKTFSLDKDIVTNVSPRIV 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD +LIAS+M Y
Sbjct: 592 R------GTTSGPLYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNVLIASLMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK+ W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NKSDWMELSRMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVRIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG--YSTPGG 278
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ P P V +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLRADG-TPWPAVGAGKRTTYGG 764
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ P+AL V +IA+ + + + GG+++ +F+ GA+ +QVC+
Sbjct: 765 VSGTAIRPVALRAVTAIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSA 818
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V ++ C L+ + + + + D+ G S
Sbjct: 819 VQNQDLTVIDDYCSGLRALLYLKSIEELRDWDGQS 853
>gi|291085135|ref|ZP_06352165.2| dihydroorotate dehydrogenase family protein [Citrobacter youngae
ATCC 29220]
gi|291072078|gb|EFE10187.1| dihydroorotate dehydrogenase family protein [Citrobacter youngae
ATCC 29220]
Length = 380
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 180/296 (60%), Gaps = 13/296 (4%)
Query: 76 RAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLET 135
+A+D GWG +V KT+ A V+PR+ L G +G++N+E I++ PLE
Sbjct: 4 KAYDTGWGGIVFKTIGFFIAN--EVSPRFDHLTKEDTG-----FVGFKNMEQIAEHPLEE 56
Query: 136 MLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKM 195
L ++LK YPDK+LIASIM E N+ W+EL VEE G D IE NFSCP M M
Sbjct: 57 NLAAIRRLKQDYPDKVLIASIMGE-NEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAM 114
Query: 196 GAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMS 255
G+ VGQ L+E+ C + +++P+ AKMTPNI D+ E A A R G++G++ INT+ S
Sbjct: 115 GSDVGQSPELVEKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKS 174
Query: 256 VMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGG 315
+ IDL P V G S+ GYS KAV PIAL + + M E +D+ +SGIGG
Sbjct: 175 ITNIDLNRKIGMPVVNGKSSISGYSGKAVKPIALRFIQQL--RMHPEL--RDFPISGIGG 230
Query: 316 VETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L ++ F+S+E+ G
Sbjct: 231 IETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMTSGLSHYLADQGFNSLEEMVG 286
>gi|317472264|ref|ZP_07931592.1| dihydroorotate dehydrogenase [Anaerostipes sp. 3_2_56FAA]
gi|316900221|gb|EFV22207.1| dihydroorotate dehydrogenase [Anaerostipes sp. 3_2_56FAA]
Length = 418
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 187/333 (56%), Gaps = 13/333 (3%)
Query: 42 SAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT 101
S + DLSI G++ NPF + S P G+NY + +A + GW V KT+ +
Sbjct: 2 SIKKDLSIDFLGVKCENPFFLSSSPVGSNYEMCAKALEAGWAGVYYKTIGI-------FI 54
Query: 102 PRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYN 161
P R G++N+E+ISD+PLE L+ ++LK YP K+++ASIM N
Sbjct: 55 PNECSPRFDITSKEGTPWTGFKNMEMISDKPLEDNLEYMRRLKQDYPTKVIVASIMGS-N 113
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
+ WE L +V E G+D IE NFSCP M MG+ VGQ+ L+ C ++ +PV
Sbjct: 114 EEEWEILAKKVTEAGVDMIECNFSCPQ-MTSSAMGSDVGQNPDLVRRYCEVVSGATHLPV 172
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
AKMTPNI ++ PA A+ G++G++AINT+ ++ ID++ + P V G S+ GYS
Sbjct: 173 IAKMTPNIGNMEIPAIAAMEGGAKGIAAINTVKAITNIDVENMTAMPVVNGKSSISGYSG 232
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV PIAL MK KD ++GIGG+ET DA +FIL+G++ +QV T VM
Sbjct: 233 AAVKPIAL----RFITQMKQHPELKDVPITGIGGIETWKDALDFILVGSSNLQVTTSVMQ 288
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+GY +V+ + L FM+ H + D G ++
Sbjct: 289 YGYRIVEDMISGLSHFMEDHGIDKLSDLVGVAL 321
>gi|340720146|ref|XP_003398504.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like isoform 2
[Bombus terrestris]
Length = 1022
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/338 (38%), Positives = 187/338 (55%), Gaps = 18/338 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY- 104
D+S+ + GL+ NPF + S PP T T+++RAF+ GW VV KT SLD V NV+PR
Sbjct: 526 DISVEMCGLKFENPFGLASAPPTTCSTMIRRAFEAGWSFVVTKTFSLDKDLVTNVSPRII 585
Query: 105 ----ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
+R G S+ + NIELIS++ +LK +P KI+IASIM Y
Sbjct: 586 KGTTSRYHYGPEQSS------FLNIELISEKSEAYWCNSITELKKDFPSKIIIASIMCTY 639
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
N+A W EL + E G DA+E+N SCPHGM E MG A GQD L+ + W+ +P
Sbjct: 640 NRADWTELAQKAESAGADALELNLSCPHGMGESGMGLACGQDPELVRNISRWVREAIKIP 699
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+ K+TPNITDI A+ A ++GVSAINT+ S+MG+ T P ++ +T GG
Sbjct: 700 FFVKLTPNITDIVSIAKAAHEGHADGVSAINTVKSLMGLHADATPWPAVGIKKATTYGGM 759
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A P+AL V SI++ N + + GIGG+++ A +F+ GA+ +QVC+ V
Sbjct: 760 SGNATRPLALRAVSSISQ------NLPGFPILGIGGIDSADVALQFLHCGASILQVCSAV 813
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYF 377
+ L+ LK + + + ++D+ G S F
Sbjct: 814 QNQDFTLIDDYVTGLKALLYLKSLEQVKDWDGQSPPTF 851
>gi|340720144|ref|XP_003398503.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like isoform 1
[Bombus terrestris]
Length = 1024
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/338 (38%), Positives = 187/338 (55%), Gaps = 18/338 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY- 104
D+S+ + GL+ NPF + S PP T T+++RAF+ GW VV KT SLD V NV+PR
Sbjct: 530 DISVEMCGLKFENPFGLASAPPTTCSTMIRRAFEAGWSFVVTKTFSLDKDLVTNVSPRII 589
Query: 105 ----ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
+R G S+ + NIELIS++ +LK +P KI+IASIM Y
Sbjct: 590 KGTTSRYHYGPEQSS------FLNIELISEKSEAYWCNSITELKKDFPSKIIIASIMCTY 643
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
N+A W EL + E G DA+E+N SCPHGM E MG A GQD L+ + W+ +P
Sbjct: 644 NRADWTELAQKAESAGADALELNLSCPHGMGESGMGLACGQDPELVRNISRWVREAIKIP 703
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+ K+TPNITDI A+ A ++GVSAINT+ S+MG+ T P ++ +T GG
Sbjct: 704 FFVKLTPNITDIVSIAKAAHEGHADGVSAINTVKSLMGLHADATPWPAVGIKKATTYGGM 763
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A P+AL V SI++ N + + GIGG+++ A +F+ GA+ +QVC+ V
Sbjct: 764 SGNATRPLALRAVSSISQ------NLPGFPILGIGGIDSADVALQFLHCGASILQVCSAV 817
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYF 377
+ L+ LK + + + ++D+ G S F
Sbjct: 818 QNQDFTLIDDYVTGLKALLYLKSLEQVKDWDGQSPPTF 855
>gi|198434443|ref|XP_002130803.1| PREDICTED: similar to Dihydropyrimidine dehydrogenase [Ciona
intestinalis]
Length = 1030
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/334 (36%), Positives = 188/334 (56%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+SI V GL+ PNPF + S PP T +++RAF+ GWG + KT SL V NV+PR
Sbjct: 536 DVSIEVCGLKFPNPFGLASAPPTTTSAMIRRAFEAGWGFALTKTYSLQKDIVTNVSPRIV 595
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LK +P+KI+IASIM +
Sbjct: 596 R------GTTSGHMFGPGQGSFLNIELISEKTCTYWCRSVTELKRDFPEKIVIASIMCAF 649
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
N+ W EL E+ G DA+E+N SCPHGM ER MG A GQD +L+ E+C W+ A +P
Sbjct: 650 NRNDWTELAKMSEDAGADALELNLSCPHGMGERGMGLACGQDPKLVIEICKWVRAAVKIP 709
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGI-DLKTLRPEPCVEGYSTPGGY 279
+AK+TPN+T+I A A G++GV+A NT+ +MG+ T P + +T GG
Sbjct: 710 FFAKLTPNVTNIVTIAEAAKDGGADGVTATNTVSGLMGLRGDSTAWPAIGKQHRTTYGGV 769
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V +I++ + + GG+++ +++ GA+ +QVC+ V
Sbjct: 770 SGNAIRPIALKAVSAISRAFPG------FPVLATGGIDSAEAGLQYLHAGASVLQVCSAV 823
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ L+ LK + M + + ++++ G S
Sbjct: 824 QNQDFTLIDDYLSGLKTLLYMRSLNEVKNWDGQS 857
>gi|326789659|ref|YP_004307480.1| dihydroorotate dehydrogenase [Clostridium lentocellum DSM 5427]
gi|326540423|gb|ADZ82282.1| dihydroorotate dehydrogenase family protein [Clostridium
lentocellum DSM 5427]
Length = 494
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 136/342 (39%), Positives = 189/342 (55%), Gaps = 13/342 (3%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
E DLSIT G+ NPF + S G+NY ++ RAF+ GW V KT+ N P+
Sbjct: 100 EVDLSITFCGVPCENPFFLSSSVVGSNYEMVARAFEMGWAGVAFKTIG-------NFVPK 152
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
R A +G++NIE ISD LE L K+LK YP K+++ASIM N+
Sbjct: 153 EVSPRFDALTKESVPFVGFKNIEQISDHTLEENLTFLKELKKNYPTKVIVASIMGT-NEE 211
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
W L V E G D IE NFSCPH M +G+ VGQ+ L+ +P+ A
Sbjct: 212 EWTYLARIVTEAGADIIECNFSCPH-MATDGLGSDVGQNPFLVATYTKATRKGTHLPILA 270
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
KMTPN+ + PA A+ +G+ G++AINTI S+M +DL++ P V G ++ GGYS KA
Sbjct: 271 KMTPNLGHMEIPALAAMEAGATGIAAINTIKSIMNVDLESFCSGPKVRGKTSVGGYSGKA 330
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
V PIAL + MKS + +SG+GG+ET DAAEF+ LG +QV T VM +G
Sbjct: 331 VKPIALRFIYE----MKSHEGLRKTPISGMGGIETWKDAAEFLALGCENLQVTTAVMQYG 386
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
Y +++ L E +K ++ + SI + G +IE+ EL R
Sbjct: 387 YRIIEDLIEGMKFYLINEGYHSISEIVGKAIEHIVPGDELDR 428
>gi|417713175|ref|ZP_12362142.1| hypothetical protein SFK272_2909 [Shigella flexneri K-272]
gi|333002866|gb|EGK22422.1| hypothetical protein SFK272_2909 [Shigella flexneri K-272]
Length = 380
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/296 (43%), Positives = 177/296 (59%), Gaps = 13/296 (4%)
Query: 76 RAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLET 135
+A+D GWG VV KT+ A V+PR+ L G IG++N+E I++ PL
Sbjct: 4 KAYDTGWGGVVFKTIGFFIAN--EVSPRFDHLVKEDTG-----FIGFKNMEQIAEHPLGE 56
Query: 136 MLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKM 195
L ++LK YPDK+LIASIM E N+ WEEL V+E G D IE NFSCP M M
Sbjct: 57 NLTALRRLKEDYPDKVLIASIMGE-NEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAM 114
Query: 196 GAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMS 255
G+ VGQ L+E+ C + +T+P+ AKMTPNI D+ E A A R G++G++AINT+ S
Sbjct: 115 GSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKS 174
Query: 256 VMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGG 315
+ IDL P V G S+ GYS K V PIAL + M++ +D+ +SGIGG
Sbjct: 175 ITNIDLNQKIGMPIVNGKSSISGYSGKVVKPIAL----RFIQQMRTHPELRDFPISGIGG 230
Query: 316 VETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ET DAAEF+LLGA T QV TG+M +GY +V+ + L ++ F S+++ G
Sbjct: 231 IETWEDAAEFLLLGAATSQVTTGIMQYGYRIVEDMASGLSHYLADQGFDSLQEMVG 286
>gi|291531974|emb|CBK97559.1| dihydroorotate oxidase B, catalytic subunit [Eubacterium siraeum
70/3]
Length = 494
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 136/352 (38%), Positives = 200/352 (56%), Gaps = 15/352 (4%)
Query: 36 LASDSASAEP--DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLD 93
+AS + AEP DLS+T GL+ NPF + S + Y + +A D GW +V KT+
Sbjct: 84 IASAAKDAEPKVDLSMTFCGLKCENPFFLSSSVVASGYDMCAKALDMGWAGIVYKTIGF- 142
Query: 94 AAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILI 153
AK+ V+PR+ L IG++N+E ISD PLE L K+LK YP KI++
Sbjct: 143 -AKMNEVSPRFDILNKETT-----PYIGFKNLEQISDHPLEENLAILKKLKENYPSKIIV 196
Query: 154 ASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWI 213
+SIM E ++ W L EE G+D IE NFSCP M MG+ VG + L+ + +
Sbjct: 197 SSIMGE-SEDEWTALARLSEEAGVDMIECNFSCPQ-MTSHSMGSDVGTNPELVTKYTAAV 254
Query: 214 NAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGY 273
+PV AKMTPNIT++ PA A+ +G++G++AINT+ S+ +DL + P P + G
Sbjct: 255 RRGTKLPVLAKMTPNITNMEIPAIAAVNAGADGIAAINTVKSITNVDLDSFVPTPDINGK 314
Query: 274 STPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTV 333
S GGYS KAV PIAL I+ M ++E ++ +SG+GG+ET D EFIL+G +
Sbjct: 315 SAVGGYSGKAVKPIAL---RFISDMKRNE-TLENVEISGMGGIETWRDGLEFILMGCTNL 370
Query: 334 QVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
QV T VM +GY ++ + + L ++ +SS+ + G + + T L R
Sbjct: 371 QVTTSVMQYGYRIIDDMLDGLSRWLTAAGYSSVSEVVGLANKNMTDAGSLDR 422
>gi|147899974|ref|NP_001087488.1| dihydropyrimidine dehydrogenase [Xenopus laevis]
gi|51258279|gb|AAH80003.1| MGC81821 protein [Xenopus laevis]
Length = 940
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 188/335 (56%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S PP T+ +++RAF+ GWG + KT SL+ V NV+PR
Sbjct: 532 DISVEMVGLKFLNPFGLASAPPTTSAPMIRRAFEAGWGFALTKTFSLEKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G I G + NIELIS++ + +LKA +P I+IASIM Y
Sbjct: 592 R------GTTSGSIYGPGQGSFLNIELISEKTAAYWCQSITELKADFPKHIIIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL E +G +A+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NKDDWTELSLMAEASGANALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVKIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYS--TPGG 278
+AK+TPN+TD+ + A A G++GV+A NT+ +MG+ P P V S T GG
Sbjct: 706 FFAKLTPNVTDVVKIAMAAQEGGADGVTATNTVSGLMGLKADA-TPWPAVGSGSRTTYGG 764
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+
Sbjct: 765 VSGNAIRPIALRAVSAIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSA 818
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V + +++ C LK + + + ++D+ G S
Sbjct: 819 VQNQDFTVIEDYCTGLKALLYLKSIDELQDWDGQS 853
>gi|449268103|gb|EMC78973.1| Dihydropyrimidine dehydrogenase [NADP+], partial [Columba livia]
Length = 919
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 186/335 (55%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG V KT SLD V NV+PR
Sbjct: 426 DISVEMAGLKFQNPFGLASATPTTSSSMIRRAFEAGWGFAVTKTFSLDKDIVTNVSPRIV 485
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G G I G + NIELIS++ + +LKA +P+ ILIAS+M Y
Sbjct: 486 R------GITSGPIYGPGQGSFLNIELISEKTAAYWCRSIAELKADFPNHILIASVMCSY 539
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+K W EL E G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 540 SKEDWTELSKMAEVAGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 599
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG--YSTPGG 278
+AK+TPN+TDI A A G++GV+A NT+ +MG+ + P P V +T GG
Sbjct: 600 FFAKLTPNVTDIVNIAMAAQEGGADGVTATNTVSGLMGLKADS-TPWPAVGAGLRTTYGG 658
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+
Sbjct: 659 VSGSAIRPIALRAVSAIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSA 712
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ + ++ C L+ + + + +ED+ G S
Sbjct: 713 IQNQDFTVIDDYCTGLRALLYLKSIEELEDWDGQS 747
>gi|221272036|sp|A8XKG6.2|DPYD_CAEBR RecName: Full=Probable dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
Length = 1053
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 189/336 (56%), Gaps = 18/336 (5%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
E D+S+ + G++ NPF + S PP T+ + +RAF++GWG ++ KT LD V NV+PR
Sbjct: 554 EVDISVDMCGVKFENPFGLASAPPTTSGPMCRRAFEQGWGFILTKTYGLDKDLVTNVSPR 613
Query: 104 YARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIME 158
R GS G + G + NIELIS++ E L+ ++LK +P KI++ASIM
Sbjct: 614 IVR------GSTSGPLYGPNQGSFMNIELISEKSCEYWLQCIRELKRDHPTKIVVASIMC 667
Query: 159 EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
YNK W EL + E G D +E+N SCPHGM E+ MG A GQ +++E+C W+ A
Sbjct: 668 VYNKEDWIELATKSEAAGADILELNLSCPHGMGEKGMGLACGQSPEIVKEICRWVRACVK 727
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPG 277
+P + KMTPNITD+ E AR A G+ GV+A NT+ S+M + P +T G
Sbjct: 728 IPFFPKMTPNITDVREIARAARDGGASGVTATNTVSSLMHMKADGNAWPAIGNTKRTTYG 787
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
G S A+ PIA+ V SIA + + + GG+E+ F++ GA+ +QVC+
Sbjct: 788 GMSGSAIRPIAMKAVSSIANELDG------FPIMATGGIESAETGLGFLMAGASVLQVCS 841
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V + +V+ C LK + + S++++ G S
Sbjct: 842 AVQNQDFTVVEDYCTGLKALLYLSGAESLKEWDGQS 877
>gi|443711859|gb|ELU05435.1| hypothetical protein CAPTEDRAFT_139921, partial [Capitella teleta]
Length = 358
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 120/287 (41%), Positives = 170/287 (59%), Gaps = 6/287 (2%)
Query: 116 KGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEET 175
+G +IG NIELI+DRPL+ L E +Q K +PD+ L S+M + +W+ ++ +VE+T
Sbjct: 1 RGDVIGMNNIELITDRPLQVNLDEIRQTKKDWPDRALFVSLMVPCEEESWKTIVQQVEDT 60
Query: 176 GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEP 235
G D +E+NF CPHGMPER MG+AVGQ +E V W +PV K+TPNIT+I
Sbjct: 61 GCDGVELNFGCPHGMPERGMGSAVGQVPEYIEMVTRWCKQHCHLPVVVKLTPNITNIVVA 120
Query: 236 ARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSI 295
A A G++ VS INTI S+ GIDL + P V T GGY +AV PIAL V I
Sbjct: 121 AEAAQTGGADAVSLINTINSITGIDLDQMIGYPTVNDQFTSGGYCGEAVKPIALNMVGQI 180
Query: 296 AKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELK 355
A+ + + +S IGG+ DAAEFI LGA TVQVCT M++G+ +V+ + + L
Sbjct: 181 ARSPDT----AELPISAIGGISCWRDAAEFIALGAGTVQVCTAAMLNGFKIVQDMIDGLS 236
Query: 356 DFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQEAIQQRKAVRKG 400
+M ++ S++ FRGA+I T + +L +I Q ++ G
Sbjct: 237 RWMDSKDYQSLDGFRGAAIPNLTDWKYLDLNYKTIASIDQNSCIQCG 283
>gi|268579437|ref|XP_002644701.1| C. briggsae CBR-DPYD-1 protein [Caenorhabditis briggsae]
Length = 1032
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 189/336 (56%), Gaps = 18/336 (5%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
E D+S+ + G++ NPF + S PP T+ + +RAF++GWG ++ KT LD V NV+PR
Sbjct: 544 EVDISVDMCGVKFENPFGLASAPPTTSGPMCRRAFEQGWGFILTKTYGLDKDLVTNVSPR 603
Query: 104 YARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIME 158
R GS G + G + NIELIS++ E L+ ++LK +P KI++ASIM
Sbjct: 604 IVR------GSTSGPLYGPNQGSFMNIELISEKSCEYWLQCIRELKRDHPTKIVVASIMC 657
Query: 159 EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
YNK W EL + E G D +E+N SCPHGM E+ MG A GQ +++E+C W+ A
Sbjct: 658 VYNKEDWIELATKSEAAGADILELNLSCPHGMGEKGMGLACGQSPEIVKEICRWVRACVK 717
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPG 277
+P + KMTPNITD+ E AR A G+ GV+A NT+ S+M + P +T G
Sbjct: 718 IPFFPKMTPNITDVREIARAARDGGASGVTATNTVSSLMHMKADGNAWPAIGNTKRTTYG 777
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
G S A+ PIA+ V SIA + + + GG+E+ F++ GA+ +QVC+
Sbjct: 778 GMSGSAIRPIAMKAVSSIANELDG------FPIMATGGIESAETGLGFLMAGASVLQVCS 831
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V + +V+ C LK + + S++++ G S
Sbjct: 832 AVQNQDFTVVEDYCTGLKALLYLSGAESLKEWDGQS 867
>gi|365174374|ref|ZP_09361824.1| dihydroorotate dehydrogenase [Synergistes sp. 3_1_syn1]
gi|363615311|gb|EHL66779.1| dihydroorotate dehydrogenase [Synergistes sp. 3_1_syn1]
Length = 407
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 194/346 (56%), Gaps = 15/346 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSL----DAAKVINVT 101
+L G++MPNPF++ S PP + ++ RAF GWG V KT++ + +++ +V+
Sbjct: 4 NLRTNFLGVEMPNPFMLASAPPARDRDMIDRAFQAGWGGAVIKTLTQYTGEEGSEIRDVS 63
Query: 102 PRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYN 161
PR +R G+ G K + G+ NIEL S + E ++ LK +PD+ +IASI+ +
Sbjct: 64 PRIFPIR-GSGGVFKNVVFGYMNIELTSQKTNEESCEDISFLKKRWPDRTVIASILYGHA 122
Query: 162 --KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219
K W+ E G DAIE+NFSCPHG E G ++G + + E+ GW+ +
Sbjct: 123 PIKEKWQRAAADCELAGADAIELNFSCPHGCSEIGSGVSIGGNPAKIREIIGWVKEATRL 182
Query: 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279
P+ K+T ++DI A ++ G++ + AINTI S+ GIDL+T RP G T GG
Sbjct: 183 PLITKLTA-LSDIVYAAALSEECGADAICAINTISSMPGIDLETFRPRMNAGGVGTAGGL 241
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S + PIAL V+ IA+ +K +SG GG+ +AAEFIL GA+T+Q+C+ V
Sbjct: 242 SGHMIKPIALRSVLEIARAVK-------IPVSGSGGIYDWREAAEFILAGASTLQICSAV 294
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
M GYG++ LC L +M+ F I+ FRG ++ H ++ R
Sbjct: 295 MEQGYGIIGGLCNGLSAYMERMGFKDIDAFRGRALGSIVHHADIDR 340
>gi|13399651|pdb|1H7X|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
gi|13399652|pdb|1H7X|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
gi|13399653|pdb|1H7X|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
gi|13399654|pdb|1H7X|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
Length = 1025
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 188/335 (56%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIV 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL + E +G DA+E+N S PHGM ER MG A GQD L+ +C W+ +P
Sbjct: 646 NKNDWMELSRKAEASGADALELNLSAPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG--YSTPGG 278
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ P P V +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADG-TPWPAVGAGKRTTYGG 764
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+
Sbjct: 765 VSGTAIRPIALRAVTTIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSA 818
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V + +++ C LK + + + ++ + G S
Sbjct: 819 VQNQDFTVIQDYCTGLKALLYLKSIEELQGWDGQS 853
>gi|410924025|ref|XP_003975482.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like [Takifugu
rubripes]
Length = 1021
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 121/321 (37%), Positives = 182/321 (56%), Gaps = 10/321 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+SI V G++ PNPF + S PP T+ +++RAF++GWG V KT LD V NV+PR
Sbjct: 529 DISIAVCGIKFPNPFGLASAPPTTSAAMIRRAFEQGWGFAVTKTFGLDKDLVTNVSPRIV 588
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R N GQ + NIELIS++ + +LK +P ++I+SIM YNK W
Sbjct: 589 RGTTSGNLYGPGQG-SFLNIELISEKTAAYWCQSVAELKKSFPTNVVISSIMCSYNKEDW 647
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EL E++G DA+E+N SCPHGM ER MG A GQD L+ +C W+ A ++P +AK+
Sbjct: 648 TELAKMAEDSGADALELNLSCPHGMGERGMGLACGQDPVLVRNICRWVRAAVSIPFFAKL 707
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGGYSCKA 283
TPN+T+I + A+ A G+ GV+A NT+ +MG+ P P V +T GG S A
Sbjct: 708 TPNVTNIVDIAKAAHEGGANGVTATNTVSGMMGLKADG-APWPSVGKGKRTTYGGVSGNA 766
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+ V
Sbjct: 767 IRPIALRAVSAIARAIPG------FPILATGGIDSADTGLQFLHAGASVLQVCSAVQNQD 820
Query: 344 YGLVKRLCEELKDFMKMHNFS 364
++ C LK + + + +
Sbjct: 821 LTVIGDYCVGLKALLYLKSLN 841
>gi|383863176|ref|XP_003707058.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like
[Megachile rotundata]
Length = 1027
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 181/334 (54%), Gaps = 10/334 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ V L+ NPF + S PP T +++RAF+ GWG V KT SLD V NV+PR
Sbjct: 529 DLSVEVCNLKFENPFGLASAPPCTTSAMIRRAFEAGWGFAVTKTFSLDKDLVTNVSPRII 588
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ + Q + NIELIS++ +LK +P KI+IASIM YNKA W
Sbjct: 589 KGTTSRHHYGPEQS-SFLNIELISEKTEAYWCNSVTELKRDFPTKIVIASIMCTYNKADW 647
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EL + E G DA+E+N SCPHGM E MG A GQD ++ + WI A +P + K+
Sbjct: 648 TELAQKAEAAGADALELNLSCPHGMGESGMGLACGQDPEIVRNISRWIRAAVKIPFFVKL 707
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGGYSCKA 283
TPNITDI A+ A ++GVSAINT+ +MG+ P P V + +T GG S A
Sbjct: 708 TPNITDIVSIAKAAYEGHADGVSAINTVQGLMGLHADA-TPWPAVGFKKATTYGGMSGNA 766
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
P AL + SI+K + + + GIGGV++ A +F+ GA+ VQVC+ +
Sbjct: 767 TRPQALRAISSISKALPG------FPILGIGGVDSADVALQFLHSGASVVQVCSAIQNQD 820
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYF 377
+ L+ LK + + + +E + G S F
Sbjct: 821 FTLIDDYVTGLKTLLYLKSLKHLEHWDGQSPPTF 854
>gi|333999853|ref|YP_004532465.1| dihydroorotate oxidase [Treponema primitia ZAS-2]
gi|333740352|gb|AEF85842.1| dihydroorotate oxidase [Treponema primitia ZAS-2]
Length = 500
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/342 (37%), Positives = 189/342 (55%), Gaps = 13/342 (3%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
+PDLSI G+ NPF + S NY + RA D GWG +V KT+ + + ++PR
Sbjct: 97 KPDLSIDFCGIPCENPFFLSSSIVAGNYEMCARALDRGWGGIVYKTIGM--GTIRELSPR 154
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ L + +G+ N+E ISDRPL+ L + K+LK YP K+++ASIM E N+
Sbjct: 155 FDVLN-----KERTSFVGFRNLEQISDRPLKDNLADLKRLKENYPSKVIVASIMGE-NED 208
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
W L E+ G+D IE NFSCPH M +G+ VGQ+ L+ + +P+ A
Sbjct: 209 EWTSLAADCEKAGVDIIECNFSCPH-MSANGLGSDVGQNPDLVAAFTAAVRRGTRLPILA 267
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
KMTPN+ + PA+ AL++G++G++AINT+ S G + +TL+ V G S GYS KA
Sbjct: 268 KMTPNLGSMVPPAKAALQNGADGIAAINTVKSFTGFNHQTLKALLDVTGKSAVSGYSGKA 327
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ PIAL + +K+ + LSG+GG+E DA +F+L+G +Q+ T VM +G
Sbjct: 328 IKPIALRFISE----LKTYPSTAAAPLSGMGGIENWQDALDFLLMGCGNLQITTAVMQYG 383
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
Y ++ L L FM + F + + G I F EL R
Sbjct: 384 YRIIDPLKAGLAAFMNRNGFKKVSEIVGRGIGVFAPAGELDR 425
>gi|187936058|gb|ACD37553.1| dihydrogenpyrimidine dehydrogenase [Adineta vaga]
Length = 968
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 187/334 (55%), Gaps = 19/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+SI + GL+ PNPF + S PP T+ +++R F+ GWG VV KT SL+ + NV+PR A
Sbjct: 541 DVSIEICGLKFPNPFGLASAPPVTSGPMIRRCFESGWGFVVTKTFSLEKDLITNVSPRMA 600
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G I G + NIELIS++ L+ K+LK +PD+I+IASIM +
Sbjct: 601 R------GTTSGHIYGPGQGSFINIELISEKTCAYWLQCIKELKNDFPDRIIIASIMCSF 654
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
++ W EL E G DA+E+N SCPHGM E+ MG A GQ L+ +C W+ A +P
Sbjct: 655 DEQDWTELAKVTEAAGADALELNLSCPHGMGEKGMGLACGQKADLVLNICKWVRAAVKIP 714
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLR-PEPCVEGYSTPGGY 279
+AKMTPNIT+I + AR A G++GV+A NT+ +M I T P +T GG
Sbjct: 715 FFAKMTPNITNIVDIARAAKEGGADGVTATNTVSGLMSIRHDTTAWPSVGKSKNTTYGGV 774
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V +I + + + + GG+++ +F+ GA+ +QVC+ V
Sbjct: 775 SGNAIRPIALRAVSAIGRALPG------FPILATGGIDSADAGIQFLYAGASALQVCSAV 828
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ L+ L+ + + + +E + G S
Sbjct: 829 QNQDFTLIDDYITGLQALLYLKSL-GLEGWDGQS 861
>gi|443734974|gb|ELU18829.1| hypothetical protein CAPTEDRAFT_161594 [Capitella teleta]
Length = 1026
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/324 (38%), Positives = 180/324 (55%), Gaps = 18/324 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+SIT+ G++ NPF + S PP T +++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DVSITMCGIRFENPFGLASAPPTTTPAMIRRAFEAGWGFALTKTFSLDKDLVTNVSPRIV 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ GQ+ G + NIELIS++ K K+LK +P K++IASIM +
Sbjct: 592 R------GTTSGQVFGPGQGSFLNIELISEKTAAFWCKGVKELKRDFPTKVVIASIMSSF 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ A +P
Sbjct: 646 NKDDWTELAIMAEASGADALELNLSCPHGMGERGMGMACGQDPNLVLNICRWVRAAVKIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+T++T A+ A G++GV+A NT+ +MG+ P E +T GG
Sbjct: 706 FFAKLTPNVTNVTVIAKAAKDGGADGVTATNTVSGMMGLKQDGAAWPNIGKEKRTTYGGM 765
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V +I + Y + GG++ +F+ GA+ +QVC+ V
Sbjct: 766 SGNAIRPIALRAVSAIGNALPG------YPILATGGIDCAEVGMQFLYAGASVLQVCSAV 819
Query: 340 MMHGYGLVKRLCEELKDFMKMHNF 363
Y L+ LK + + +
Sbjct: 820 QNQDYTLIDDYITGLKCLLYLQSL 843
>gi|291558287|emb|CBL35404.1| dihydroorotate oxidase B, catalytic subunit [Eubacterium siraeum
V10Sc8a]
Length = 494
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/352 (38%), Positives = 199/352 (56%), Gaps = 15/352 (4%)
Query: 36 LASDSASAEP--DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLD 93
+ S + AEP DLS+T GL+ NPF + S + Y + +A D GW +V KT+
Sbjct: 84 ITSAAKDAEPKADLSMTFCGLKCENPFFLSSSVVASGYDMCAKALDMGWAGIVYKTIGF- 142
Query: 94 AAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILI 153
AK+ V+PR+ L IG++N+E ISD PLE L K+LK YP KI++
Sbjct: 143 -AKMNEVSPRFDILNKETT-----PYIGFKNLEQISDHPLEENLAILKKLKENYPTKIIV 196
Query: 154 ASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWI 213
+SIM E ++ W L EE G+D IE NFSCP M MG+ VG + L+ + +
Sbjct: 197 SSIMGE-SEDEWTALARLSEEAGVDMIECNFSCPQ-MTSHSMGSDVGTNPELVAKYTAAV 254
Query: 214 NAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGY 273
+PV AKMTPNIT++ PA A+ +G++G++AINT+ S+ +DL + P P + G
Sbjct: 255 RRGTKLPVLAKMTPNITNMEIPAIAAVNAGADGIAAINTVKSITNVDLDSFVPAPDINGK 314
Query: 274 STPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTV 333
S GGYS KAV PIAL I+ M ++E ++ +SG+GG+ET D EFIL+G +
Sbjct: 315 SAVGGYSGKAVKPIAL---RFISDMKRNE-TLENVEISGMGGIETWRDGLEFILMGCTNL 370
Query: 334 QVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
QV T VM +GY ++ + + L ++ +SS+ + G + + T L R
Sbjct: 371 QVTTSVMQYGYRIIDDMLDGLSRWLTAAGYSSVSEVVGLANKNMTDAGSLDR 422
>gi|150016815|ref|YP_001309069.1| dihydropyrimidine dehydrogenase [Clostridium beijerinckii NCIMB
8052]
gi|149903280|gb|ABR34113.1| dihydroorotate dehydrogenase family protein [Clostridium
beijerinckii NCIMB 8052]
Length = 517
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/342 (38%), Positives = 194/342 (56%), Gaps = 13/342 (3%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
E DL I G++ NPF + S G+NY ++ +AF+ GW V KT+ + K V+PR
Sbjct: 119 EVDLEIDFCGVKCENPFFLSSSVVGSNYEMVAKAFEMGWAGVAFKTIGMFVPK--EVSPR 176
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ L +G++NIE ISD LE + K+LK YP KI++ASIM + N+
Sbjct: 177 FTAL-----SKESVPFVGFKNIEQISDHTLEENIGFLKRLKKDYPSKIIVASIMGQ-NEE 230
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
W +L + E G D IE NFSCPH M + +G+ VGQ+ L+ +P+ A
Sbjct: 231 EWTKLAKLMTEAGADIIECNFSCPH-MTSKGVGSDVGQNPDLVALYTKATRKGTNLPILA 289
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
KMTPNI ++ PA A+ +G+ G++AINTI S+M ++L+ EP VEG ++ GGYS KA
Sbjct: 290 KMTPNIGNVEIPAMAAMEAGATGIAAINTIKSIMNLNLENFESEPNVEGKTSVGGYSGKA 349
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
V PIAL + MK+ KD +SG+GG+ET DAAEF+ LG +Q+ T VM +G
Sbjct: 350 VKPIALRFIHD----MKACEELKDAPISGMGGIETWKDAAEFMALGCENLQITTSVMQYG 405
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
Y ++ L +K ++ + +I + G+++ +L R
Sbjct: 406 YRIIDDLINGMKLYLSSQGYKNISEIVGSALPNIVPTDKLDR 447
>gi|345860429|ref|ZP_08812745.1| dihydroorotate dehydrogenase family protein [Desulfosporosinus sp.
OT]
gi|344326481|gb|EGW37943.1| dihydroorotate dehydrogenase family protein [Desulfosporosinus sp.
OT]
Length = 504
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/344 (38%), Positives = 191/344 (55%), Gaps = 13/344 (3%)
Query: 42 SAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT 101
S + DL I G+ NPF + S +NY ++ RAF GW KT+ + V+
Sbjct: 104 SKKIDLRIEFCGVPCENPFFLSSSVVASNYDMVARAFAMGWAGAAFKTIGTFVPQ--EVS 161
Query: 102 PRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYN 161
PR++ +R N IG++NIE ISD LE L ++LK +P KILIASI+ + N
Sbjct: 162 PRFSTIRKEGN-----SFIGFKNIEQISDHTLEENLDYLRRLKQDFPQKILIASILGQ-N 215
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
+A W L +V E G+D IE NFSCPH M +G+ VGQ+ L+ +P+
Sbjct: 216 EAEWTFLARQVTEAGVDIIECNFSCPH-MTGEGLGSDVGQNPDLVALYTDATRKGTHLPI 274
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
AKMTPN+ ++ PA A+++G+ G++AINTI S+M I L EP V+G S GGYS
Sbjct: 275 LAKMTPNLGNMEIPALAAMKNGATGIAAINTIKSIMNIHLDDFSSEPRVDGKSCVGGYSG 334
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
K V PIAL + +K + K+ +SG+GG+ET DAAEFI LG +QV T VM
Sbjct: 335 KTVKPIALRFIHD----LKKHPDLKETPISGMGGIETWRDAAEFIALGCANLQVTTSVMQ 390
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+GY ++ L L ++ FSS+++ G ++ EL R
Sbjct: 391 YGYRIIDDLSAGLSSYLGEKGFSSVQEMVGMALPNLVPADELNR 434
>gi|167750622|ref|ZP_02422749.1| hypothetical protein EUBSIR_01599 [Eubacterium siraeum DSM 15702]
gi|167656301|gb|EDS00431.1| dihydropyrimidine dehydrogenase [Eubacterium siraeum DSM 15702]
Length = 432
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/352 (38%), Positives = 199/352 (56%), Gaps = 15/352 (4%)
Query: 36 LASDSASAEP--DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLD 93
+AS + EP DLS+T GL+ NPF + S + Y + +A D GW +V KT+
Sbjct: 22 IASAAKDIEPKADLSMTFCGLKCENPFFLSSSVVASGYDMCAKALDMGWAGIVYKTIGF- 80
Query: 94 AAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILI 153
AK+ V+PR+ L IG++N+E ISD PLE L K+LK YP KI++
Sbjct: 81 -AKMNEVSPRFDILNKETT-----PYIGFKNLEQISDHPLEENLAILKKLKENYPTKIIV 134
Query: 154 ASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWI 213
+SIM E ++ W L EE G+D IE NFSCP M MG+ VG + L+ + +
Sbjct: 135 SSIMGE-SEDEWTALARLSEEAGVDMIECNFSCPQ-MTSHSMGSDVGTNPELVAKYTAAV 192
Query: 214 NAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGY 273
+PV AKMTPNIT++ PA A+ +G++G++AINT+ S+ +DL + P P + G
Sbjct: 193 KRGTKLPVLAKMTPNITNMEIPAIAAVNAGADGIAAINTVKSITNVDLDSFVPTPNINGK 252
Query: 274 STPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTV 333
S GGYS KAV PIAL I+ M ++E ++ +SG+GG+ET D EFIL+G +
Sbjct: 253 SAVGGYSGKAVKPIAL---RFISDMKRNE-TLENVEISGMGGIETWRDGLEFILMGCTNL 308
Query: 334 QVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
Q+ T VM +GY ++ + + L ++ +SS+ + G + + T L R
Sbjct: 309 QITTSVMQYGYRIIDDMLDGLSRWLTAAGYSSVSEAVGLANKNMTDAGSLDR 360
>gi|189425084|ref|YP_001952261.1| dihydroorotate dehydrogenase [Geobacter lovleyi SZ]
gi|189421343|gb|ACD95741.1| dihydroorotate dehydrogenase family protein [Geobacter lovleyi SZ]
Length = 398
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 191/340 (56%), Gaps = 18/340 (5%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L T G+ NPFV+ S PP +++RAF+ GWG V KT+ + V N+ R+A
Sbjct: 5 LDSTYLGVVFRNPFVLASAPPTATADMVRRAFEAGWGGAVIKTLIRE--PVHNLPNRFAA 62
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA-AW 165
+R G +I G+EN+EL+S++ + + + +KA +PD +I SIM N W
Sbjct: 63 IRHG------NRITGFENLELLSEQAPDEWYRAIRCIKADFPDCPIIGSIMGAANSPDEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWIN--AKATVPVWA 223
L ++ G D +E+NFSCPHG PER GAA+GQ+ ++ W+ + T+PV
Sbjct: 117 HSLALGCQDAGADLLELNFSCPHGYPERGRGAAIGQNPDYAAQITRWVTDCKEITIPVIP 176
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K+T + +I A +G+ G AINTI S G DL+TLRP+P + G ++ GGYS
Sbjct: 177 KLTAAVANIQNIAEELALAGAHGFCAINTIPSFFGFDLRTLRPKPDIGGKTSYGGYSGPG 236
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ PIAL V + + + GG+ G DA EF+LLGA VQ+ T VM+HG
Sbjct: 237 IKPIALRAVSELCQ-------SPGLPVMASGGIANGFDAVEFMLLGAPVVQMATEVMLHG 289
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
+G++ R+ +EL++FM H+F++ DF G + T+ +L
Sbjct: 290 FGIIDRMQQELREFMTWHDFTAPVDFIGLCRDSATSFKKL 329
>gi|432915661|ref|XP_004079198.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like [Oryzias
latipes]
Length = 1021
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 194/341 (56%), Gaps = 21/341 (6%)
Query: 40 SASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVIN 99
SA + D+S+ + G++ PNPF + S PP T+ +++RAF++GWG + KT LD V N
Sbjct: 523 SAIDQVDISVEMCGIKFPNPFGLASAPPTTSTAMIRRAFEQGWGFALTKTFGLDKDLVTN 582
Query: 100 VTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIA 154
V+PR R G+ G + G + NIELIS++ + +LK +P ++I+
Sbjct: 583 VSPRIVR------GTTSGPLYGPGLGSFLNIELISEKTAAYWCQSVAELKKDFPKNVVIS 636
Query: 155 SIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWIN 214
SIM YNK W L E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+
Sbjct: 637 SIMCAYNKDDWTVLAKMAEASGADALELNLSCPHGMGERGMGLACGQDPVLVRNICRWVR 696
Query: 215 AKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG-- 272
A ++P +AK+TPN+T+I + A+ A G++GV+A NT+ +MG+ + P P V
Sbjct: 697 AAVSIPFFAKLTPNVTNIVDIAKAAHEGGADGVTATNTVSGLMGLKADS-SPWPGVGAAK 755
Query: 273 YSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANT 332
+T GG S A+ PIAL V +IAK + + + GG+++ +F+ GA+
Sbjct: 756 RTTYGGVSGNAIRPIALKAVSAIAKAIPG------FPILATGGIDSAETGLQFLHAGASV 809
Query: 333 VQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+QVC+ + + +++ C LK + + + ++D+ G S
Sbjct: 810 LQVCSAIQNQDFTVIEDYCLGLKALLYLKSL-ELKDWDGQS 849
>gi|312868661|ref|ZP_07728854.1| dihydropyrimidine dehydrogenase [Lactobacillus oris PB013-T2-3]
gi|311095775|gb|EFQ54026.1| dihydropyrimidine dehydrogenase [Lactobacillus oris PB013-T2-3]
Length = 431
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 184/340 (54%), Gaps = 11/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G+ NPF + S P G Y + K A+D GWG +V KT+S D + V+PR+A
Sbjct: 5 DLSIDFLGVHFENPFCLSSSPVGNCYEMCKNAYDAGWGGIVYKTLSPDHFVIDEVSPRFA 64
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+L I ++N+E +++ P+ L ++LK YPDK+LIASIM E W
Sbjct: 65 QL-----AKEDTPFIAFKNMEQLAEHPMAQDLAAMRRLKEEYPDKVLIASIMGE-TPQDW 118
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+L V G D IE+NFSCP M MG+ VG + L + C + +PV AKM
Sbjct: 119 TDLAKLVTAAGADMIELNFSCPQ-MTSHTMGSDVGTNPELCKTNCAAVKKGTDLPVLAKM 177
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT + + L G++GVS+INT+ S+ +DL P + G S G S K+V
Sbjct: 178 TPNITTMIPVVKACLAGGADGVSSINTVKSITDVDLDNKVALPNINGKSAVSGLSGKSVK 237
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + ++S + +SGIGG+ET DAAEFILLGA+T+QV T +M +GY
Sbjct: 238 PIAL----RFLQQIRSAAGLEQLPVSGIGGIETWEDAAEFILLGASTLQVTTAIMQYGYR 293
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
++ L L +M ++D G + + +L R
Sbjct: 294 IIDDLTNGLMHYMDEQGVDQLKDLVGIANQNIVPTNQLDR 333
>gi|194500464|gb|ACF75488.1| dihydrogenpyrimidine dehydrogenase [Adineta vaga]
Length = 835
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/307 (39%), Positives = 176/307 (57%), Gaps = 18/307 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+SI + GL+ PNPF + S PP T+ +++R F+ GWG VV KT SL+ + NV+PR A
Sbjct: 541 DVSIEICGLKFPNPFGLASAPPVTSGPMIRRCFESGWGFVVTKTFSLEKDLITNVSPRMA 600
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G I G + NIELIS++ L+ K+LK +PD+I+IASIM +
Sbjct: 601 R------GTTSGHIYGPGQGSFINIELISEKTCAYWLQCIKELKNDFPDRIIIASIMCSF 654
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
++ W EL E G DA+E+N SCPHGM E+ MG A GQ L+ +C W+ A +P
Sbjct: 655 DEQDWTELAKVTEAAGADALELNLSCPHGMGEKGMGLACGQKADLVLNICKWVRAAVKIP 714
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLR-PEPCVEGYSTPGGY 279
+AKMTPNIT+I + AR A G++GV+A NT+ +M I T P +T GG
Sbjct: 715 FFAKMTPNITNIVDIARAAKEGGADGVTATNTVSGLMSIRHDTTAWPSVGKSQNTTYGGV 774
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V +I + + + + GG+++ +F+ GA+ +QVC+ V
Sbjct: 775 SGNAIRPIALRAVSAIGRALPG------FPILATGGIDSADAGIQFLYAGASALQVCSAV 828
Query: 340 MMHGYGL 346
+ L
Sbjct: 829 QNQDFTL 835
>gi|1561730|gb|AAC47288.1| Dreg-3 protein [Drosophila melanogaster]
Length = 626
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 130/339 (38%), Positives = 192/339 (56%), Gaps = 13/339 (3%)
Query: 24 GLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWG 83
GL L + L + +D + D+S+ + G++ NPF + S PP T+ +++RAF++GWG
Sbjct: 103 GLPLDTPAALPLFYTDIDAV--DISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQGWG 160
Query: 84 AVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-WENIELISDRPLETMLKEFKQ 142
VV KT LD V NV+PR +R +G G G + NIELIS++ E LK +
Sbjct: 161 FVVTKTFGLDKDLVTNVSPRI--VRGTTSGYKYGPQQGCFLNIELISEKRAEYWLKSIGE 218
Query: 143 LKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQD 202
LK +P+KI+IASIM +N+ W EL + E++G DA+E+N SCPHGM ER MG A GQD
Sbjct: 219 LKRDFPEKIVIASIMCSFNEEDWTELAIKAEQSGADALELNLSCPHGMGERGMGLACGQD 278
Query: 203 CRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDL- 261
L+E++ W+ +P + K+TPNITDI A A R SAINT+ +MG+
Sbjct: 279 PELVEQISRWVRKAVKLPFFIKLTPNITDIVSIAAAAKRE-EPMRSAINTVQGLMGLKAD 337
Query: 262 KTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGD 321
T P E +T GG S A P+AL + IA + + + GIGG+++G
Sbjct: 338 STAWPAIGKEQRTTYGGVSGNATRPMALKAISDIANRVPG------FPILGIGGIDSGEV 391
Query: 322 AAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKM 360
A +FI GA +Q+C+ V + +++ C LK + +
Sbjct: 392 ALQFIHAGATVLQICSSVQNQDFTVIEDYCTALKALLYL 430
>gi|259502930|ref|ZP_05745832.1| dihydroorotate dehydrogenase [Lactobacillus antri DSM 16041]
gi|259169123|gb|EEW53618.1| dihydroorotate dehydrogenase [Lactobacillus antri DSM 16041]
Length = 431
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 185/340 (54%), Gaps = 11/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G+ NPF + S P G Y + K A+D GWG +V KT+S D + V+PR+A
Sbjct: 5 DLSIDFLGVHFENPFCLSSSPVGNCYEMCKNAYDAGWGGIVYKTLSPDHFVIDEVSPRFA 64
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+L I ++N+E +++ PL L ++LK YP+K+LIASIM E W
Sbjct: 65 QLT-----KEDTPFIAFKNMEQLAEHPLAQDLDAMRRLKKEYPNKVLIASIMGE-TPQDW 118
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+L V G D IE+NFSCP M MG+ VG + L + C + +PV AKM
Sbjct: 119 TDLAKLVTAAGADMIELNFSCPQ-MTSHTMGSDVGTNPELCKSNCAAVKRGTNLPVLAKM 177
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT + + L G++G+S+INT+ S+ +DL P + G S G S K+V
Sbjct: 178 TPNITTMIPVVKACLAGGADGISSINTVKSITDVDLDNKVALPNINGKSAVSGLSGKSVK 237
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + ++S + +SGIGG+ET DAAEFILLGA+T+QV T +M +GY
Sbjct: 238 PIAL----RFLQQIRSAAGLEQLPVSGIGGIETWEDAAEFILLGASTLQVTTAIMQYGYR 293
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
++ L L +M + ++D G + + +L R
Sbjct: 294 IIDDLTNGLMHYMDEQHVDHLKDLVGIANKNIVPTNQLDR 333
>gi|417885694|ref|ZP_12529845.1| 4Fe-4S binding domain protein [Lactobacillus oris F0423]
gi|341594613|gb|EGS37297.1| 4Fe-4S binding domain protein [Lactobacillus oris F0423]
Length = 431
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 185/340 (54%), Gaps = 11/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G+ NPF + S P G Y + K A+D GWG +V KT+S D + V+PR+A
Sbjct: 5 DLSIDFLGVHFENPFCLSSSPVGNCYEMCKNAYDAGWGGIVYKTLSPDHFVIDEVSPRFA 64
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+L I ++N+E +++ PL L ++LK YP+K+LIASIM E W
Sbjct: 65 QLT-----KEDTPFIAFKNMEQLAEHPLAQDLDAMRRLKKEYPNKVLIASIMGE-TPQDW 118
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+L V G D IE+NFSCP M MG+ VG + L + C + +PV AKM
Sbjct: 119 TDLAKLVTAAGADMIELNFSCPQ-MTSHTMGSDVGTNPELCKSNCAAVKRGTDLPVLAKM 177
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNIT + + L G++G+S+INT+ S+ +DL P + G S G S K+V
Sbjct: 178 TPNITTMIPVVKACLAGGADGISSINTVKSITDVDLDNKVALPNINGKSAVSGLSGKSVK 237
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + ++S + +SGIGG+ET DAAEFILLGA+T+QV T +M +GY
Sbjct: 238 PIAL----RFLQQIRSAAGLEQLPVSGIGGIETWEDAAEFILLGASTLQVTTAIMQYGYR 293
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
++ L L +M + ++D G + + +L R
Sbjct: 294 IIDDLTNGLMHYMDEQHVDHLKDLVGIANKNIVPTNQLDR 333
>gi|321459596|gb|EFX70648.1| hypothetical protein DAPPUDRAFT_202177 [Daphnia pulex]
Length = 1040
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 184/334 (55%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+ + + GL+ PNPF + S PP T +++R F+ GWG + KT SLD V NV+PR
Sbjct: 536 DIGVEMCGLKFPNPFGLASAPPTTTSAMIRRGFEAGWGFALTKTFSLDKDIVTNVSPRIV 595
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G I G + NIELIS++ + +LKA +P+ ILIASIM Y
Sbjct: 596 R------GTTSGHIYGPGQGSFLNIELISEKTAAYWCQSVTELKADFPNHILIASIMCSY 649
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
N+A W EL G DA+E+N SCPHGM ER MG A GQD L+ +C W+ A T+P
Sbjct: 650 NEADWTELARMAAAAGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRAAVTIP 709
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+T I AR A ++GV+A NT+ +MG+ + P E +T GG
Sbjct: 710 FFAKLTPNVTSIVAIARAAYEGQADGVTATNTVSGLMGVRSDGSAWPSIGKEQKTTYGGM 769
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V +IA+ + + + GG+++ A +F+ GA+ +Q+C+ V
Sbjct: 770 SGNAIRPIALKAVSAIARALPG------FPILATGGIDSADAALQFLQCGASVLQICSSV 823
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +V LK M + + ++ + G S
Sbjct: 824 QNQDFTVVDDYITGLKTLMYLKSIDGLKGWDGQS 857
>gi|291244574|ref|XP_002742170.1| PREDICTED: dihydropyrimidine dehydrogenase-like [Saccoglossus
kowalevskii]
Length = 1025
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/334 (36%), Positives = 183/334 (54%), Gaps = 18/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ V GL+ NPF + S PP T +++R F+ GW + KT SLD V NV+PR
Sbjct: 531 DISVEVCGLKFSNPFGLASAPPTTTSAMIRRGFEAGWSFALTKTFSLDKDIVTNVSPRIV 590
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA + DKI+I+SIM Y
Sbjct: 591 R------GTTSGHVYGPGQGSFLNIELISEKTAAYWCQTVTELKADFKDKIIISSIMCSY 644
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W +L E++G DA+E+N SCPHGM ER MG A GQD L+ +C W+ A +P
Sbjct: 645 NKEDWTKLAKMAEDSGADALELNLSCPHGMGERGMGLACGQDAELVRNICRWVRAAVKIP 704
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI A+ A ++GV+A NT+ +MG+ T P E +T GG
Sbjct: 705 FFAKLTPNVTDIVVIAKAAYEGKADGVTATNTVSGLMGLKSNGTAWPAVGKEKLTTYGGV 764
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V +I + + + + GG+++ +F+ GA+ +QV + V
Sbjct: 765 SGNAIRPIALRAVSAIGRALPG------FPILATGGIDSADAGLQFLQSGASLLQVGSAV 818
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ LK M + + + D+ G S
Sbjct: 819 QNQDFTVIEDYITGLKTLMYLKSIDELSDWDGQS 852
>gi|66828195|ref|XP_647452.1| dihydropyrimidine dehydrogenase [Dictyostelium discoideum AX4]
gi|74859332|sp|Q55FT1.1|DPYD_DICDI RecName: Full=Dihydropyrimidine dehydrogenase [NADP(+)];
Short=DHPDHase; Short=DPD; AltName: Full=Dihydrothymine
dehydrogenase; AltName: Full=Dihydrouracil dehydrogenase
gi|60475501|gb|EAL73436.1| dihydropyrimidine dehydrogenase [Dictyostelium discoideum AX4]
Length = 1009
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/329 (37%), Positives = 186/329 (56%), Gaps = 8/329 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + G++ PNPF + S P T+ +++R+F++GWG V KT SLD V NV+PR
Sbjct: 530 DISVEMCGMKFPNPFGLASATPATSAAMIRRSFEQGWGFAVTKTFSLDKDLVTNVSPRIV 589
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R + GQ + NIELIS++ K +LK +PD+I+IASIM +NK W
Sbjct: 590 RGTTSGHHFGPGQG-AFLNIELISEKTCHYWCKAIGELKRDFPDRIVIASIMCGFNKEDW 648
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+L E +G D IE+N SCPHGM E+ MG A GQD L+ +C W+ A +P +AK+
Sbjct: 649 TQLAKMAEASGADGIELNLSCPHGMGEKGMGLACGQDTELVFHICQWVRAATRLPFFAKL 708
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKT-LRPEPCVEGYSTPGGYSCKAV 284
TPN+T+I E A+ A G++GV+AINT+ +MG+ + P E +T GG S A
Sbjct: 709 TPNVTEIKEIAKAAHDGGADGVTAINTVSGLMGLKGDSNAWPAIGDEKRTTYGGVSGNAT 768
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V SI K + DY + GG ++ +F+ GA+ VQ+C+ V +
Sbjct: 769 RPIALRAVSSIRKSL------PDYPIMATGGADSADATIQFLHCGASVVQICSSVQNQDF 822
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+V+ LK ++ M + + + G S
Sbjct: 823 TVVQDYITGLKTYLYMQSREDLLQWDGQS 851
>gi|358068375|ref|ZP_09154839.1| hypothetical protein HMPREF9333_01720 [Johnsonella ignava ATCC
51276]
gi|356693423|gb|EHI55100.1| hypothetical protein HMPREF9333_01720 [Johnsonella ignava ATCC
51276]
Length = 362
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 185/340 (54%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G+ NPF + S P G+NY + +A + GWG + KT+S+ P
Sbjct: 6 DLSIDFLGVHCENPFFLSSSPVGSNYEMCAKALECGWGGIFYKTISV-------FIPNEC 58
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R G++N+E+ SD+P E K+LK +P+K+++ASIM N W
Sbjct: 59 SPRFDIASKENTPWTGFKNMEMTSDKPNEVNFGYIKRLKKDFPEKVIVASIMGS-NDDEW 117
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
L ++ G D IE NFSCP M MG+ VGQ L++ C ++A T+PV AKM
Sbjct: 118 AVLAKEAQKAGSDMIECNFSCPQ-MTSSTMGSDVGQSPELVKHYCEVVSANTTLPVIAKM 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI ++ PAR A+ G++G++AINT+ S+ IDL P V G S+ GYS AV
Sbjct: 177 TPNIGNMEIPARAAIEGGAKGIAAINTVKSITNIDLDLNIGMPVVNGKSSVSGYSGAAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +K + K L+GIGG+ET D EF+LLGA+ +QV T +M +GY
Sbjct: 237 PIALRFISD----LKHDPLLKSIPLTGIGGIETWRDCVEFLLLGASNIQVTTAIMQYGYR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+V+ + L +M+ + +ED G +++ EL R
Sbjct: 293 IVEDMISGLSFYMEDYGIKKVEDIVGKALDSIVGADELDR 332
>gi|167768313|ref|ZP_02440366.1| hypothetical protein CLOSS21_02869 [Clostridium sp. SS2/1]
gi|317497756|ref|ZP_07956069.1| dihydroorotate dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429761880|ref|ZP_19294290.1| dihydropyrimidine dehydrogenase [Anaerostipes hadrus DSM 3319]
gi|167709837|gb|EDS20416.1| dihydropyrimidine dehydrogenase [Clostridium sp. SS2/1]
gi|291560289|emb|CBL39089.1| dihydroorotate oxidase B, catalytic subunit [butyrate-producing
bacterium SSC/2]
gi|316894945|gb|EFV17114.1| dihydroorotate dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
gi|429182665|gb|EKY23753.1| dihydropyrimidine dehydrogenase [Anaerostipes hadrus DSM 3319]
Length = 418
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/344 (36%), Positives = 189/344 (54%), Gaps = 13/344 (3%)
Query: 42 SAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT 101
S + DLSI G++ NPF + S P G+NY + +A + GWG + KT+ +
Sbjct: 2 SLKKDLSIDFLGVKCENPFFLSSSPVGSNYEMCAKALEAGWGGIYYKTIGI-------FI 54
Query: 102 PRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYN 161
P R +G++N+E ISD+PLE L+ ++LK YP+K+++ASIM N
Sbjct: 55 PDECSPRFDITTKEGTPWVGFKNMEQISDKPLEVNLEYMRRLKQDYPNKVIVASIMGS-N 113
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
W L V E G+D IE NFSCP M MG+ VGQ+ L++ C + A +PV
Sbjct: 114 DEEWTTLAKAVTEAGVDMIECNFSCPQ-MTSHAMGSDVGQNPELVKHYCEVVTAATHLPV 172
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
AKMTPNI ++ PA ++ G+ G++AINT+ ++ ID++ + P V G S+ GYS
Sbjct: 173 IAKMTPNIGNMEIPAIASMEGGAAGIAAINTVKAITNIDIENITAMPVVNGKSSISGYSG 232
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV PIAL MK + + ++G+GG+ET DA EFIL+GA+ +QV T VM
Sbjct: 233 AAVKPIAL----RFITQMKQHPDLVNVPITGVGGIETWRDALEFILVGASNLQVTTAVMQ 288
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+GY +V+ + L +M+ + + D G ++ +L R
Sbjct: 289 YGYRIVEDMISGLSHYMEDNGIEKLSDLVGLALPNIVPAEDLDR 332
>gi|91092056|ref|XP_970271.1| PREDICTED: similar to dihydropyrimidine dehydrogenase [Tribolium
castaneum]
gi|270004691|gb|EFA01139.1| hypothetical protein TcasGA2_TC010364 [Tribolium castaneum]
Length = 1016
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/319 (38%), Positives = 182/319 (57%), Gaps = 14/319 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ + G++ NPF + S PP T +++RAF++GW V KT SLD V NV+PR
Sbjct: 523 DLSVEMCGIKFENPFGLASAPPATTTAMIRRAFEQGWAYTVTKTFSLDKDLVTNVSPRIV 582
Query: 106 R-LRAGAN-GSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
R AG N G +G + NIELIS++ LK ++LK +P KI+IASIM YN+
Sbjct: 583 RGTTAGHNYGPQQGSFL---NIELISEKCAAYWLKGIQELKTDFPTKIVIASIMCSYNEQ 639
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
W+ L E+ G DA+E+N SCPHGM E MG A GQ L++ + W+ A +P +
Sbjct: 640 DWKTLSKMAEDAGADALELNLSCPHGMGESGMGLACGQKPELVKGISQWVRATVKIPFFI 699
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGGYSC 281
K+TPNIT+I + A A G++GV+AINT+ +MG+ P P V + +T GG S
Sbjct: 700 KLTPNITNIVDIATAAYEGGADGVAAINTVSGLMGLSANG-SPWPAVGLDKRTTYGGVSG 758
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
A P+ L V ++A + +++ GIGG+++ A +++ GA VQVC+ +
Sbjct: 759 NATRPMGLRAVSAVANALPG------FAIMGIGGIDSADVALQYLQAGATVVQVCSAIQN 812
Query: 342 HGYGLVKRLCEELKDFMKM 360
+ L+ C LK + +
Sbjct: 813 QDFTLIDDYCTGLKALLYL 831
>gi|357623930|gb|EHJ74888.1| dihydropyrimidine dehydrogenase [Danaus plexippus]
Length = 1025
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/322 (38%), Positives = 182/322 (56%), Gaps = 12/322 (3%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
E DLS+ V G++ NPF + S PP T+ +++RAF +GWG VV KT LD V NV+PR
Sbjct: 524 EVDLSVEVCGIRFENPFGLASAPPTTSSAMIRRAFTQGWGFVVTKTFGLDKDIVTNVSPR 583
Query: 104 YAR-LRAGAN-GSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYN 161
R + +G N G +G + NIELIS++ + +LK +P K++IASIM YN
Sbjct: 584 IVRGVTSGENYGPGQGSFL---NIELISEKCEAYWCQSITELKRDFPTKVIIASIMCSYN 640
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
+ W EL + E +G DA+E+N SCPHGM E MG A GQD L++ + W+ +P
Sbjct: 641 EDDWTELARKAEASGADALELNLSCPHGMGESGMGLACGQDPVLVKGISQWVRKAINIPF 700
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGYS 280
+ K+TPNITDI A A G+ GVSAINT+ +M + T P+ E +T GG S
Sbjct: 701 FVKLTPNITDIVSIATAAYEGGASGVSAINTVSGLMTVRADATPWPQVGREKSTTYGGVS 760
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
A P+ L V +IA + + + GIGG+++ A +F+L GA VQ+C+ V
Sbjct: 761 GNATRPMGLRAVSAIANKLPG------FPILGIGGIDSADSALQFMLCGAPVVQICSAVQ 814
Query: 341 MHGYGLVKRLCEELKDFMKMHN 362
+ +V+ LK + + +
Sbjct: 815 NQDFTVVEDYVTGLKALLYLRS 836
>gi|33333732|gb|AAQ11981.1| dihydropyrimidine dehydrogenase [Dictyostelium discoideum]
Length = 1009
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 124/329 (37%), Positives = 185/329 (56%), Gaps = 8/329 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+ + + G++ PNPF + S P T+ +++R+F++GWG V KT SLD V NV+PR
Sbjct: 530 DICVEMCGMKFPNPFGLASATPATSAAMIRRSFEQGWGFAVTKTFSLDKDLVTNVSPRIV 589
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R + GQ + NIELIS++ K +LK +PD+I+IASIM +NK W
Sbjct: 590 RGTTSGHHFGPGQG-AFLNIELISEKTCHYWCKAIGELKRDFPDRIVIASIMCGFNKEDW 648
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+L E +G D IE+N SCPHGM E+ MG A GQD L+ +C W+ A +P +AK+
Sbjct: 649 TQLAKMAEASGADGIELNLSCPHGMGEKGMGLACGQDTELVFHICQWVRAATRLPFFAKL 708
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKT-LRPEPCVEGYSTPGGYSCKAV 284
TPN+T+I E A+ A G++GV+AINT+ +MG+ + P E +T GG S A
Sbjct: 709 TPNVTEIKEIAKAAHDGGADGVTAINTVSGLMGLKGDSNAWPAIGDEKRTTYGGVSGNAT 768
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V SI K + DY + GG ++ +F+ GA+ VQ+C+ V +
Sbjct: 769 RPIALRAVSSIRKSL------PDYPIMATGGADSADATIQFLHCGASVVQICSSVQNQDF 822
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+V+ LK ++ M + + + G S
Sbjct: 823 TVVQDYITGLKTYLYMQSREDLLQWDGQS 851
>gi|410103667|ref|ZP_11298588.1| dihydroorotate dehydrogenase [Parabacteroides sp. D25]
gi|409236396|gb|EKN29203.1| dihydroorotate dehydrogenase [Parabacteroides sp. D25]
Length = 497
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 187/350 (53%), Gaps = 13/350 (3%)
Query: 38 SDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKV 97
S ++ PDL+I G++ NPF++ S P NY + RA + GW + KT+S +
Sbjct: 101 SSPLTSSPDLAIDFCGIRCANPFILASSPVAHNYEICVRALEAGWAGICFKTISFYPSH- 159
Query: 98 INVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM 157
V+PR+ ++ IG++N+E +S+ +E +LK YPDK++I+SIM
Sbjct: 160 -EVSPRFDQMEVDGV-----PFIGFKNMEQLSEASVEENFDTLYRLKQRYPDKLIISSIM 213
Query: 158 EEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA 217
+ W L + G D IE NFSCP M + MG+ VGQ L+
Sbjct: 214 GRTDDE-WTRLAQYSTQAGADIIECNFSCPQ-MTQEGMGSDVGQSPELVRRFTAATRRGT 271
Query: 218 TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277
+P+ AKMTPNI +T A A G+ G++AINTI + ID K L P V G S+
Sbjct: 272 HLPILAKMTPNIGQMTPVALAAHEGGATGIAAINTIKCITRIDEKALTARPVVCGLSSVS 331
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
GYS KAV PIAL + +A S+ + +SGIGG+ET DA +F+LLG +Q+CT
Sbjct: 332 GYSGKAVRPIALRFIHELA----SDPSAGKMPISGIGGIETWRDALDFLLLGCTNLQICT 387
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQ 387
VM +G+ ++ LCE L+ FM+ + + ++ D G ++ +L R Q
Sbjct: 388 AVMQYGFRIIDDLCEGLRLFMQENGYKTLSDLIGIALPNIVPPEKLERTQ 437
>gi|255013479|ref|ZP_05285605.1| dihydropyrimidine dehydrogenase [Bacteroides sp. 2_1_7]
Length = 452
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 187/350 (53%), Gaps = 13/350 (3%)
Query: 38 SDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKV 97
S ++ PDL+I G++ NPF++ S P NY + RA + GW + KT+S +
Sbjct: 56 SSPLTSSPDLAIDFCGIRCANPFILASSPVAHNYEICVRALEAGWAGICFKTISFYPSH- 114
Query: 98 INVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM 157
V+PR+ ++ IG++N+E +S+ +E +LK YPDK++I+SIM
Sbjct: 115 -EVSPRFDQMEVDGV-----PFIGFKNMEQLSEASVEENFDTLYRLKQRYPDKLIISSIM 168
Query: 158 EEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA 217
+ W L + G D IE NFSCP M + MG+ VGQ L+
Sbjct: 169 GRTDDE-WTRLAQYSTQAGADIIECNFSCPQ-MTQEGMGSDVGQSPELVRRFTAATRRGT 226
Query: 218 TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277
+P+ AKMTPNI +T A A G+ G++AINTI + ID K L P V G S+
Sbjct: 227 HLPILAKMTPNIGQMTPVALAAHEGGATGIAAINTIKCITRIDEKALTARPVVCGLSSVS 286
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
GYS KAV PIAL + +A S+ + +SGIGG+ET DA +F+LLG +Q+CT
Sbjct: 287 GYSGKAVRPIALRFIHELA----SDPSAGKMPISGIGGIETWRDALDFLLLGCTNLQICT 342
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQ 387
VM +G+ ++ LCE L+ FM+ + + ++ D G ++ +L R Q
Sbjct: 343 AVMQYGFRIIDDLCEGLRLFMQENGYKTLSDLIGIALPNIVPPEKLERTQ 392
>gi|405954438|gb|EKC21880.1| Dihydropyrimidine dehydrogenase [NADP+] [Crassostrea gigas]
Length = 903
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 190/356 (53%), Gaps = 20/356 (5%)
Query: 24 GLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWG 83
G+ +PS+ L + E D+S+ + GL+ PNP+ + S P T+ T+++RAF+ GWG
Sbjct: 535 GIPIPSKPSLPKFFT--PIDEVDVSVEMCGLKFPNPYGLASATPTTSSTMIRRAFEAGWG 592
Query: 84 AVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLK 138
+ KT SLD V NV+PR R G+ G I G + NIELIS++ +
Sbjct: 593 FALTKTFSLDKDIVTNVSPRIVR------GTTSGHIYGPGQGSYLNIELISEKTAAYWCQ 646
Query: 139 EFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAA 198
+LK +P+ I+I SIM YNK W EL E G DA+E+N SCPHGM ER MG A
Sbjct: 647 SVTELKKDFPEHIVIGSIMCSYNKEDWTELAKMAEAAGSDALELNLSCPHGMGERGMGLA 706
Query: 199 VGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMG 258
GQD L+ +C W+ +P +AK+TPN+T I A+ A ++GV+A NT+ +MG
Sbjct: 707 CGQDPELVRNICRWVRDAVKIPFFAKLTPNVTSIVSIAKAAYEGNADGVTATNTVSGLMG 766
Query: 259 IDLKTLR-PEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVE 317
+ + P + +T GG S A+ PIAL V +IA+ + + + GG++
Sbjct: 767 LKNNGMAWPNVGKDHRTTYGGVSGNAIRPIALRAVTAIARELPG------FPILATGGID 820
Query: 318 TGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +F+ GA +QVC+ V Y ++ LK + + + + ++ G S
Sbjct: 821 SAEAGLQFLQGGATVLQVCSAVHNQEYTVIDDYITGLKTLLYLRSVEELHNWDGQS 876
>gi|301310152|ref|ZP_07216091.1| dihydroorotate dehydrogenase family protein [Bacteroides sp. 20_3]
gi|423336393|ref|ZP_17314140.1| dihydroorotate dehydrogenase [Parabacteroides distasonis
CL09T03C24]
gi|300831726|gb|EFK62357.1| dihydroorotate dehydrogenase family protein [Bacteroides sp. 20_3]
gi|409240868|gb|EKN33642.1| dihydroorotate dehydrogenase [Parabacteroides distasonis
CL09T03C24]
Length = 497
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 188/350 (53%), Gaps = 13/350 (3%)
Query: 38 SDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKV 97
S ++ PDL+I G++ NPF++ S P NY + RA + GW + KT+S +
Sbjct: 101 SSPLTSSPDLAIDFCGIRCANPFILASSPVAHNYEMCVRALEAGWAGICFKTISF--YPI 158
Query: 98 INVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM 157
V+PR+ ++ IG++N+E +S+ +E +LK YPDK++I+SIM
Sbjct: 159 HEVSPRFDQMEVDGV-----PFIGFKNMEQLSEASVEENFDTLYRLKQRYPDKLIISSIM 213
Query: 158 EEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA 217
+ W L + G D IE NFSCP M + MG+ VGQ+ L+
Sbjct: 214 GRTDDE-WTRLAQYSTQAGADIIECNFSCPQ-MTQEGMGSDVGQNPELVRRFTAATRRGT 271
Query: 218 TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277
+P+ AKMTPNI +T A A G+ G++AINTI + ID K L P V G S+
Sbjct: 272 HLPILAKMTPNIGQMTPVALAAHEGGATGIAAINTIKCITRIDEKALTARPVVCGLSSVS 331
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
GYS KAV PIAL + +A S+ + +SGIGG+ET DA +F+LLG +Q+CT
Sbjct: 332 GYSGKAVRPIALRFIHELA----SDPSAGKMPISGIGGIETWRDALDFLLLGCTNLQICT 387
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQ 387
VM +G+ ++ LCE L+ FM+ + + ++ D G ++ +L R Q
Sbjct: 388 AVMQYGFRIIDDLCEGLRLFMQENGYKTLSDLIGIALPNIVPPEKLERTQ 437
>gi|15921375|ref|NP_377044.1| dihydropyrimidine dehydrogenase [Sulfolobus tokodaii str. 7]
gi|15622161|dbj|BAB66153.1| dihydropyrimidine dehydrogenase [Sulfolobus tokodaii str. 7]
Length = 350
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/364 (36%), Positives = 205/364 (56%), Gaps = 19/364 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G+ PNPF++GSGP N + A GWG VV KT+ D+ +V P YA
Sbjct: 3 DLSVTFQGITFPNPFLVGSGPTTGNPPKIISAIRAGWGGVVVKTIG-DSIVRKSVRPMYA 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKA-LYPDKILIASIMEEYNKAA 164
+R +II +EN+ELI++ PLE K + +K+ + +I SIM + +
Sbjct: 62 TIRRNR------EIIAFENLELITEDPLEVWDKYLRVIKSEIGKSAPIIVSIMGGPDYSE 115
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W L E+ G D +E+NF CPHG PE++ GA +GQ L++E + + +PV AK
Sbjct: 116 WIRLARWAEDRGADMLELNFGCPHGEPEKRTGAFIGQHADLVQEYTKEVVSSVGIPVIAK 175
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPNITDI E A+ A +G++ V+AINT+ V+ +D++ +P P + GYS GG S AV
Sbjct: 176 LTPNITDIRETAKAAENAGAKAVTAINTVNGVIAVDIERAQPLPDINGYSGYGGISGPAV 235
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PI L V I + +SG+GG+ DA E+I++GA TVQ T ++ G+
Sbjct: 236 KPIGLAAVSKI-------YTSTSLQISGVGGIFDWRDAVEYIMMGATTVQSVTYTILKGF 288
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSD 404
+ +EL+ FM+ + +IED RG + + TT+ L ++ ++R +V + + +
Sbjct: 289 EFINEWKKELESFMERKGYRAIEDMRGLAAKKMTTYEVL----EKVTKRRTSVDEEINTV 344
Query: 405 KDWT 408
+D T
Sbjct: 345 RDET 348
>gi|150007812|ref|YP_001302555.1| dihydropyrimidine dehydrogenase [Parabacteroides distasonis ATCC
8503]
gi|149936236|gb|ABR42933.1| oxidoreductase iron-sulfur protein [Parabacteroides distasonis ATCC
8503]
Length = 497
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 187/350 (53%), Gaps = 13/350 (3%)
Query: 38 SDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKV 97
S ++ PDL+I G++ NPF++ S P NY + RA + GW + KT+S +
Sbjct: 101 SSPLTSSPDLAIDFCGIRCANPFILASSPVAHNYEMCVRALEAGWAGICFKTISFYPSH- 159
Query: 98 INVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM 157
V+PR+ ++ IG++N+E +S+ +E +LK YPDK++I+SIM
Sbjct: 160 -EVSPRFDQMEVDGV-----PFIGFKNMEQLSEASVEENFDTLYRLKQRYPDKLIISSIM 213
Query: 158 EEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA 217
+ W L + G D IE NFSCP M + MG+ VGQ L+
Sbjct: 214 GRTDDE-WTRLAQYSTQAGADIIECNFSCPQ-MTQEGMGSDVGQSPELVRRFTAATRRGT 271
Query: 218 TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277
+P+ AKMTPNI +T A A G+ G++AINTI + ID K L P V G S+
Sbjct: 272 HLPILAKMTPNIGQMTPVALAAHEGGATGIAAINTIKCITRIDEKALTARPVVCGLSSVS 331
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
GYS KAV PIAL + +A S+ + +SGIGG+ET DA +F+LLG +Q+CT
Sbjct: 332 GYSGKAVRPIALRFIHELA----SDPSAGKMPISGIGGIETWRDALDFLLLGCTNLQICT 387
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQ 387
VM +G+ ++ LCE L+ FM+ + + ++ D G ++ +L R Q
Sbjct: 388 AVMQYGFRIIDDLCEGLRLFMQENGYKTLSDLIGIALPNIVPPEKLERTQ 437
>gi|262381679|ref|ZP_06074817.1| oxidoreductase iron-sulfur protein [Bacteroides sp. 2_1_33B]
gi|262296856|gb|EEY84786.1| oxidoreductase iron-sulfur protein [Bacteroides sp. 2_1_33B]
Length = 497
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 187/350 (53%), Gaps = 13/350 (3%)
Query: 38 SDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKV 97
S ++ PDL+I G++ NPF++ S P NY + RA + GW + KT+S +
Sbjct: 101 SSPLTSSPDLAIDFCGVRCANPFILASSPVAHNYEMCVRALEAGWAGICFKTISFYPSH- 159
Query: 98 INVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM 157
V+PR+ ++ IG++N+E +S+ +E +LK YPDK++I+SIM
Sbjct: 160 -EVSPRFDQMEVDGV-----PFIGFKNMEQLSEASVEENFDTLYRLKQRYPDKLIISSIM 213
Query: 158 EEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA 217
+ W L + G D IE NFSCP M + MG+ VGQ L+
Sbjct: 214 GRTDDE-WTRLAQYSTQAGADIIECNFSCPQ-MTQEGMGSDVGQSPELVRRFTAATRRGT 271
Query: 218 TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277
+P+ AKMTPNI +T A A G+ G++AINTI + ID K L P V G S+
Sbjct: 272 HLPILAKMTPNIGQMTPVALAAHEGGATGIAAINTIKCITRIDEKALTARPVVCGLSSVS 331
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
GYS KAV PIAL + +A S+ + +SGIGG+ET DA +F+LLG +Q+CT
Sbjct: 332 GYSGKAVRPIALRFIHELA----SDPSAGKMPISGIGGIETWRDALDFLLLGCTNLQICT 387
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQ 387
VM +G+ ++ LCE L+ FM+ + + ++ D G ++ +L R Q
Sbjct: 388 AVMQYGFRIIDDLCEGLRLFMQENGYKTLSDLIGIALPNIVPPEKLERTQ 437
>gi|315924015|ref|ZP_07920242.1| dihydroorotate dehydrogenase [Pseudoramibacter alactolyticus ATCC
23263]
gi|315622641|gb|EFV02595.1| dihydroorotate dehydrogenase [Pseudoramibacter alactolyticus ATCC
23263]
Length = 418
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 194/347 (55%), Gaps = 13/347 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G+NY + ++A + GWG + KT+S+ +PR+
Sbjct: 6 DLSIDFLGVKCENPFFLSSSPVGSNYDMCRKALEAGWGGIYYKTISVYIPN--ECSPRFD 63
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A G+ G++N+E SD+P E K+LK +P K++++SIM ++ W
Sbjct: 64 I--ASKEGTP---WTGFKNMEQTSDKPNEVNFGYIKKLKEDFPSKVIVSSIMGSTDEE-W 117
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
L E+ G D IE NFSCP M MG+ VGQ+ L++ C ++A +PV AKM
Sbjct: 118 AFLARESEKAGADLIECNFSCPQ-MTSSTMGSDVGQNPDLVKHYCEVVSAATCLPVIAKM 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI ++ PAR A+ G++G++AINT+ ++ +D+ + P V G S GYS AV
Sbjct: 177 TPNIGNMEIPARAAIEGGAKGIAAINTVKAITNLDIDKMVGMPIVNGKSAVSGYSGAAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL + +K + KD L+G+GG+ET D EF++LGA +QV T VM +GY
Sbjct: 237 PIALRFISD----LKHDPVLKDVPLTGVGGIETWRDCLEFLMLGAENLQVTTAVMQYGYR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQ 392
+V+ + L FM+ H + D G +++ + EL R + +Q
Sbjct: 293 IVEDMISGLSHFMEDHGIDRLRDLVGVALKNIISAEELDRSYKVLVQ 339
>gi|256840078|ref|ZP_05545587.1| oxidoreductase iron-sulfur protein [Parabacteroides sp. D13]
gi|423331693|ref|ZP_17309477.1| dihydroorotate dehydrogenase [Parabacteroides distasonis
CL03T12C09]
gi|256739008|gb|EEU52333.1| oxidoreductase iron-sulfur protein [Parabacteroides sp. D13]
gi|409229534|gb|EKN22406.1| dihydroorotate dehydrogenase [Parabacteroides distasonis
CL03T12C09]
Length = 497
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 187/350 (53%), Gaps = 13/350 (3%)
Query: 38 SDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKV 97
S ++ PDL+I G++ NPF++ S P NY + RA + GW + KT+S +
Sbjct: 101 SSPLTSSPDLAIDFCGVRCANPFILASSPVAHNYEMCVRALEAGWAGICFKTISFYPSH- 159
Query: 98 INVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM 157
V+PR+ ++ IG++N+E +S+ +E +LK YPDK++I+SIM
Sbjct: 160 -EVSPRFDQMEVDGV-----PFIGFKNMEQLSEASVEENFDTLYRLKQRYPDKLIISSIM 213
Query: 158 EEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA 217
+ W L + G D IE NFSCP M + MG+ VGQ L+
Sbjct: 214 GRTDDE-WTRLAQYSTQAGADIIECNFSCPQ-MTQEGMGSDVGQSPELVRRFTAATRRGT 271
Query: 218 TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277
+P+ AKMTPNI +T A A G+ G++AINTI + ID K L P V G S+
Sbjct: 272 HLPILAKMTPNIGQMTPVALAAHEGGATGIAAINTIKCITRIDEKALTARPVVCGLSSVS 331
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
GYS KAV PIAL + +A S+ + +SGIGG+ET DA +F+LLG +Q+CT
Sbjct: 332 GYSGKAVRPIALRFIHELA----SDPSAGKMPISGIGGIETWRDALDFLLLGCTNLQICT 387
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQ 387
VM +G+ ++ LCE L+ FM+ + + ++ D G ++ +L R Q
Sbjct: 388 AVMQYGFRIIDDLCEGLRLFMQENGYKTLSDLIGIALPNIVPPEKLERTQ 437
>gi|328865277|gb|EGG13663.1| dihydropyrimidine dehydrogenase [Dictyostelium fasciculatum]
Length = 1016
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/329 (35%), Positives = 183/329 (55%), Gaps = 8/329 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ G++ NPF + S P T+ ++++R+F++GWG V KT SLD V NV+PR
Sbjct: 533 DISVDFCGVKFENPFGLASATPCTSASMIRRSFEQGWGFAVTKTFSLDKDLVTNVSPRIV 592
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R + GQ + NIELIS++ K +LK +P+K++IASIM +NK W
Sbjct: 593 RGTTSGHHFGPGQG-AFLNIELISEKTCHYWCKSVTELKRDFPEKVVIASIMCGFNKEDW 651
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
++L E +G D +E+N SCPHGM ER MG A GQ+ L+ +C W+ +P +AK+
Sbjct: 652 QQLAVMAEASGADMLELNLSCPHGMGERGMGLACGQNPELVLHICKWVREAIKIPFFAKL 711
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKT-LRPEPCVEGYSTPGGYSCKAV 284
TPN+T++ E A A G+ GV+AINT+ +MG+ + P E +T GG S A
Sbjct: 712 TPNVTEVKEIALAAYNGGATGVTAINTVSGLMGLKGDSNAWPAVGSEKRTTYGGVSGNAT 771
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
P+AL V SI + + DY + GG ++ +F+ GA+ +Q+C+ V +
Sbjct: 772 RPMALRAVSSIRRAL------PDYPIMATGGADSADTCIQFLHCGASVIQICSAVQNQDF 825
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+V+ LK ++ M + + + G S
Sbjct: 826 TVVQDYITGLKTYLYMQSREDLLQWDGQS 854
>gi|237746522|ref|ZP_04577002.1| oxidoreductase iron-sulfur protein [Oxalobacter formigenes HOxBLS]
gi|229377873|gb|EEO27964.1| oxidoreductase iron-sulfur protein [Oxalobacter formigenes HOxBLS]
Length = 415
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 185/340 (54%), Gaps = 13/340 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P ++Y ++ +AF+ GWG VV KT + P
Sbjct: 4 DLSIDFLGIRCENPFFLSSSPVSSDYVMVAKAFETGWGGVVYKTAGI-------FLPDEC 56
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R G G G++N+E+ISD+PL+ L+ ++LK +PDK++IASIM + W
Sbjct: 57 SPRFDITGQPGGPWTGFKNMEMISDKPLDVNLENMRRLKREFPDKVMIASIMGS-DDDEW 115
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
L +V +TG D IE NFSCP M MG+ VGQ L+ + +PV AKM
Sbjct: 116 RTLAQKVTDTGADIIECNFSCPQ-MTSSAMGSDVGQSPELVARYTEAVCRATHLPVLAKM 174
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI + PA A+ +G++G++AINTI ++ ID + L P P V G S+ GYS A+
Sbjct: 175 TPNIGHMELPAIAAVNAGAKGIAAINTIKAITRIDTECLSPMPVVNGKSSISGYSGPAIK 234
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL MK + +SGIGG+ T DA EF+L+G++TVQV + VM +GY
Sbjct: 235 PIAL----RFIAQMKQHPELRHIPVSGIGGIVTWKDALEFLLVGSSTVQVTSAVMEYGYR 290
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+V+ L L FM + + G ++ ++ R
Sbjct: 291 IVEDLASGLSHFMDENGIERLSGLVGKALPNIVPADDIDR 330
>gi|289423327|ref|ZP_06425135.1| dihydroorotate oxidase [Peptostreptococcus anaerobius 653-L]
gi|289156258|gb|EFD04915.1| dihydroorotate oxidase [Peptostreptococcus anaerobius 653-L]
Length = 417
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 130/341 (38%), Positives = 188/341 (55%), Gaps = 15/341 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P +NY ++K+AF+ GW V KT+ + +PR+
Sbjct: 6 DLSIDFLGVKCENPFFLSSSPVCSNYDMIKKAFEAGWAGVYYKTIGIFIPD--ECSPRFD 63
Query: 106 RLRAGANGSAKGQI-IGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
R +G + G++N+E ISD+PLE L+ +LK +P K+L SIM +
Sbjct: 64 ITRK------EGAVWTGFKNMEQISDKPLEKNLEYISRLKKDFPTKVLAVSIMGS-TEEE 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W L +V E G D IE NFSCP M MG+ VGQ+ L+E+ + +PV AK
Sbjct: 117 WSILAKKVTEAGADLIECNFSCPQ-MTSHAMGSDVGQNPELVEKYTRAVVESTHLPVIAK 175
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
MTPNI ++ PA A++ G++G++AINTI ++ ID++ + P V S+ GYS AV
Sbjct: 176 MTPNIGNMEIPAMAAMKGGAKGIAAINTIKAITNIDVENMTAMPVVNAKSSISGYSGAAV 235
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL + MK KD ++G+GG+ET DA EF+L GA+ +QV T VM +GY
Sbjct: 236 KPIALRFITQ----MKQHEELKDVPITGMGGIETWSDALEFLLCGASNLQVTTSVMQYGY 291
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+V+ + L FM IED G ++ EL R
Sbjct: 292 RIVEDMISGLSHFMDERGIDKIEDLVGMALPNIVPAEELDR 332
>gi|156543632|ref|XP_001604620.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like [Nasonia
vitripennis]
Length = 1025
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 188/355 (52%), Gaps = 20/355 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ V G++ NPF + S PP T+ +++R+F+ GWG V KT LD V N++PR
Sbjct: 532 DLSVEVCGIKFENPFGLASAPPATSCAMIRRSFEAGWGFAVTKTFGLDKDMVTNISPRIV 591
Query: 106 RLRAGANGSAKGQIIGWE-----NIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
+ G+ G G E NIELIS++ K +LK +P+K++IASIM Y
Sbjct: 592 K------GTTDGYHYGPEQSSFLNIELISEKTAAYWCKGITELKRDFPEKVVIASIMCTY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NKA W EL E TG +A+E+N SCPHGM E+ MG A GQD L+ + W+ A +P
Sbjct: 646 NKADWTELAQMAEATGCEALELNLSCPHGMGEKGMGLACGQDPELVRNIARWVRAAVKIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGG 278
+ K+TPNITD+ A+ A ++GVSAINT+ +M + P P V +T GG
Sbjct: 706 FFVKLTPNITDVVALAKAAYEGQADGVSAINTVQGLMSVKADG-TPWPAVGSAKATTYGG 764
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A PIAL + +AK + + + GIGGV++ + +F+ GA +QV +
Sbjct: 765 VSGNATRPIALRAISKVAKALPG------FPILGIGGVDSAEVSLQFLQCGARILQVGSA 818
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQ 393
+ + L++ LK + + + ++ + G S F Q A+ Q
Sbjct: 819 IQNQDFTLIEDYTTGLKALLYLKSVGHLKGWDGQSPPTFKHQKGKPVSLQHALGQ 873
>gi|440793290|gb|ELR14477.1| hypothetical protein ACA1_192070 [Acanthamoeba castellanii str.
Neff]
Length = 1028
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/360 (36%), Positives = 197/360 (54%), Gaps = 28/360 (7%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
E D+SI V G++ PNPF + S P T+ +++RAF+ GWG V KT SL V N++PR
Sbjct: 530 EVDISIDVAGIRFPNPFGLASATPCTSGDMIRRAFEAGWGFAVTKTFSLVKDLVTNISPR 589
Query: 104 YARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIME 158
R G+ G G + NIELIS++ L +LK +PD+++IASIM
Sbjct: 590 IVR------GTTSGHRFGPNQGAFLNIELISEKTEAYWLTAITELKQDFPDRVVIASIMC 643
Query: 159 EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
+NK W+EL + +G DA+E+N SCPHGM ER MG A GQ+ L+ ++C W+ A
Sbjct: 644 AFNKDDWQELTKKAVASGADALELNLSCPHGMGERGMGLACGQNPALVRDICRWVKEVAK 703
Query: 219 -VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYST 275
VP +AK+TPN+TDI E A A G+ GV+AINTI +MGI P + E +T
Sbjct: 704 DVPFFAKLTPNVTDIREIATAAKEGGATGVTAINTISGLMGIKTSDGGAWPSIGKEKKTT 763
Query: 276 PGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQV 335
GG S A P+AL V +I + +Y + GG+++ A +F+ GA+ VQ+
Sbjct: 764 YGGVSGNATRPVALRAVSAIGNYL------PNYPILATGGIDSAEVALQFLQCGASVVQI 817
Query: 336 CTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRK 395
C+ + + +V+ LK + + S ED A EY + VR+ A++ ++
Sbjct: 818 CSSIQNQDFTVVQDYITGLKAALYL---KSREDH--AEWEY---QSPAVRVDPAAVRAKQ 869
>gi|332028865|gb|EGI68891.1| Dihydropyrimidine dehydrogenase [Acromyrmex echinatior]
Length = 1019
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 181/336 (53%), Gaps = 14/336 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ + G++ NPF + S PP T+ +++RAF+ GW + KT SLD V NV+PR
Sbjct: 527 DLSVEICGIKFENPFGLASAPPCTSSAMIRRAFEAGWAFAITKTFSLDKDLVTNVSPRIV 586
Query: 106 RLRAGAN--GSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ + G +G + NIELIS++ + +LK +P K++IASIM YN+A
Sbjct: 587 KGTTSRHHYGPEQGSFL---NIELISEKTADYWCGSITELKRDFPTKVVIASIMCTYNRA 643
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
W +L + E G D +E+N SCPHGM E MG A GQD L+ +C W+ +P +
Sbjct: 644 DWTKLAKKAETAGSDGLELNLSCPHGMGESGMGLACGQDPELVRNICRWVREAVKIPFFV 703
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGGYSC 281
K+TPNITDI A+ A ++GV+AINTI +MG+ P P V +T GG S
Sbjct: 704 KLTPNITDILSIAKAAYEGKADGVTAINTISGLMGLHADA-TPWPAVGLNKSTTYGGVSG 762
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
A P AL + I++ + + + G GGV++ A +F+ GA+ VQVC+ +
Sbjct: 763 NATRPQALKAISIISRHLPG------FPILGTGGVDSADVALQFLHCGASVVQVCSAIQN 816
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYF 377
+ L+ LK + + + +D+ G S F
Sbjct: 817 QDFTLIDDYVTGLKALLYLKSLVQTKDWDGQSPPTF 852
>gi|320166820|gb|EFW43719.1| dihydropyrimidine dehydrogenase [Capsaspora owczarzaki ATCC 30864]
Length = 1056
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 121/329 (36%), Positives = 181/329 (55%), Gaps = 8/329 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ V G+ NPF + S PP T +++R+F+ GWG + KT SLD V NV+PR
Sbjct: 567 DLSVDVAGVHFINPFGLASAPPTTTSAMIRRSFEVGWGFALTKTFSLDKDCVTNVSPRIV 626
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R + GQ + NIELIS++ + +LK +P ++IASIM +N+ W
Sbjct: 627 RGTTSGHSFGPGQG-AFLNIELISEKSAAYWCQSIVELKRDHPAHVVIASIMCSFNREDW 685
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ + VP +AK+
Sbjct: 686 IELAKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICKWVRSAIKVPFFAKL 745
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGID-LKTLRPEPCVEGYSTPGGYSCKAV 284
TPN+T+I + AR A G+ GV+A NT+ +M + T P + +T GG S A+
Sbjct: 746 TPNVTNIVDIARAAKEGGATGVTATNTVSGLMHLKGDATAWPGVGNDKRTTYGGVSGNAI 805
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V +I++ N + + GG+++ A +F+ GA+ VQ+C+ V +
Sbjct: 806 RPIALKAVSAISR------NFPGFPILATGGIDSADAALQFLHAGASVVQICSSVQNQDF 859
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+V+ LK + M S + + G S
Sbjct: 860 TVVQDYITGLKTLLYMKGRSDLAGWDGQS 888
>gi|291543218|emb|CBL16327.1| dihydroorotate oxidase B, catalytic subunit [Ruminococcus
champanellensis 18P13]
Length = 486
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 197/362 (54%), Gaps = 16/362 (4%)
Query: 27 LPSRIGLRVLASDSASAEPDLS-ITVNGLQMP--NPFVIGSGPPGTNYTVMKRAFDEGWG 83
P RI A A+PDL+ + + L +P NPF + S + Y + RA GW
Sbjct: 69 FPLRIRQTAAALPKRRAKPDLNRLATDFLGVPCENPFFLSSSVVASGYDMCARALSMGWA 128
Query: 84 AVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQL 143
VV KT+ L + V+PR+ A G +G+ N+E ISD E + ++L
Sbjct: 129 GVVFKTIGLFIPQ--EVSPRF-----DAIGKEDTPFVGFRNLEQISDHDPEENFETLRRL 181
Query: 144 KALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDC 203
K +P+K++++SIM N+A W EL R E+ G D IE NFSCP M +G+ VGQD
Sbjct: 182 KEAFPEKVIVSSIMGR-NEAEWTELARRSEQAGADIIECNFSCPQ-MCGNGLGSDVGQDP 239
Query: 204 RLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKT 263
L+ + +P+ AKMTPN+ + PA A+ +G++G++AINT+ S+ G+DL +
Sbjct: 240 ELVRAYTAAVRKGTRLPILAKMTPNLAHMELPAIAAVEAGADGLAAINTVKSITGVDLDS 299
Query: 264 LRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAA 323
+ P V+G S GYS KAV PIAL + +A + K +SG+GG+ET DAA
Sbjct: 300 MASLPQVDGRSAVSGYSGKAVKPIALRFIYDMASCDRL----KGVPISGMGGIETWQDAA 355
Query: 324 EFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
EF+ LG +QV T VM +GY +++ L L D+++ F+S+E GA + +L
Sbjct: 356 EFLALGCGNLQVTTAVMQYGYRIIEDLLYGLADYLEGKGFASVEQLVGAGVGKIVPAEQL 415
Query: 384 VR 385
R
Sbjct: 416 NR 417
>gi|358334609|dbj|GAA31156.2| dihydropyrimidine dehydrogenase (NADP+) [Clonorchis sinensis]
Length = 1060
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 187/325 (57%), Gaps = 12/325 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ V G++ PNPF + S PP T+ +++RAF+ GWG V KT L+ + NV+PR
Sbjct: 574 DVSVEVCGIKFPNPFGLASAPPTTSSAMIRRAFEAGWGFAVTKTFGLNKDLITNVSPRIV 633
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R + + Q + NIELIS++ + K+LK +PD+++IASIM Y+K W
Sbjct: 634 RSQVSGHLYGPEQA-AFLNIELISEKTKDYWCASIKELKHDFPDRVVIASIMCGYSKEDW 692
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAK 224
E+L D G DA+E+N SCPHGM ER MG A GQD +++ ++C W+ +A VPV+AK
Sbjct: 693 EKLTDVTLTAGPDALELNLSCPHGMGERGMGLACGQDVKMVRDICAWVKQRAGRVPVFAK 752
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGYSCKA 283
+TPN+T+I + A+ A G++GV+A NT+ ++ I + P+ E +T GG S A
Sbjct: 753 LTPNVTEIVDIAKAAHEGGADGVTATNTVSGLVEIRGDGSAWPKVGSEERTTYGGLSGNA 812
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ PIAL V +IA+ + + + GG+++ F+ GA+ +QVC+ V
Sbjct: 813 IRPIALRDVSAIARALPG------FPILATGGIDSAEAGLSFLYAGASGLQVCSAVQNQD 866
Query: 344 YGLVKRLCEELKDFMKMH---NFSS 365
+ ++ +K + M FSS
Sbjct: 867 FTIIDDFITGIKAGLYMRANKEFSS 891
>gi|241754001|ref|XP_002401173.1| dihydropyrimidine dehydrogenase, putative [Ixodes scapularis]
gi|215508370|gb|EEC17824.1| dihydropyrimidine dehydrogenase, putative [Ixodes scapularis]
Length = 833
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 183/331 (55%), Gaps = 12/331 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ GL+ NPF + S PP T +++RAF GWG + KT L+ V NV+PR
Sbjct: 331 DLSVEFCGLKFKNPFGLASAPPTTTSAMIRRAFQAGWGFALTKTFGLNKDVVTNVSPRI- 389
Query: 106 RLRAGANGSAKGQIIG-WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+R G G +G + NIELIS++ +LK +PD ++IASIM +++
Sbjct: 390 -IRGSTFGHTYGPGLGSFLNIELISEKTAAYWCGSISELKRDFPDHVVIASIMCTFDEKD 448
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W EL E G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P +AK
Sbjct: 449 WTELAQMAETAGADALELNLSCPHGMGERGMGLACGQDPNLVRNICLWVRKAVKIPFFAK 508
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGGYSCK 282
+TPN+T++ + A+ A ++GV+A+NT+ +MG+ + P P V + +T GG S
Sbjct: 509 LTPNVTNVVDIAKAAYEGKADGVTAVNTVSGLMGLKYNS-DPWPGVGAQKRTTYGGMSGN 567
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ PIAL V +IA+ + + + GG+++ +F+ GA+ +QVC+ +
Sbjct: 568 AIRPIALRAVSAIARALPG------FPILATGGIDSAEAGFQFLQAGASVLQVCSSIQNQ 621
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ LK + + N +ED+ S
Sbjct: 622 DFTVIEDYLTGLKAALYIRNLKGMEDWESQS 652
>gi|157103945|ref|XP_001648193.1| dihydropyrimidine dehydrogenase [Aedes aegypti]
gi|108869301|gb|EAT33526.1| AAEL014199-PA [Aedes aegypti]
Length = 1037
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 174/321 (54%), Gaps = 18/321 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ V G++ NPF + S PP T +++RAF++GWG V KT +LD V NV+PR
Sbjct: 532 DLSVEVCGVKFENPFGLASAPPTTATAMIRRAFEQGWGFAVTKTFALDKDMVTNVSPRIV 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G G G + NIELIS++ L +LK +P K++IASIM Y
Sbjct: 592 R------GVTSGHTFGPQQGAFLNIELISEKCAAYWLTGIAELKRDFPTKVVIASIMCTY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
N+ W EL R E G D +E+N SCPHGM E MG A GQD +L+ + W+ A +P
Sbjct: 646 NEEDWTELAKRAEAAGADMLELNLSCPHGMGESGMGLACGQDPKLVYNISLWVRAAVKIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLR-PEPCVEGYSTPGGY 279
+ K+TPNITDI A+ A R ++GVSAINT+ +M I T P V+ +T GG
Sbjct: 706 FFVKLTPNITDIVAIAQAAQRGKADGVSAINTVQGLMSIKADTTPWPAVGVDKRTTYGGV 765
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A P AL + I M + + GIGG+++ A +FI GA +Q+C+ +
Sbjct: 766 SGNATRPQALRAISLIGNKMPG------FPICGIGGIDSADVALQFIQCGAPILQICSSI 819
Query: 340 MMHGYGLVKRLCEELKDFMKM 360
+ +V+ LK + +
Sbjct: 820 QNQDFTVVEDYILGLKALLYL 840
>gi|157125488|ref|XP_001654354.1| dihydropyrimidine dehydrogenase [Aedes aegypti]
gi|108873619|gb|EAT37844.1| AAEL010204-PA [Aedes aegypti]
Length = 1056
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 174/321 (54%), Gaps = 18/321 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ V G++ NPF + S PP T +++RAF++GWG V KT +LD V NV+PR
Sbjct: 551 DLSVEVCGVKFENPFGLASAPPTTATAMIRRAFEQGWGFAVTKTFALDKDMVTNVSPRIV 610
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G G G + NIELIS++ L +LK +P K++IASIM Y
Sbjct: 611 R------GVTSGHTFGPQQGAFLNIELISEKCAAYWLTGITELKRDFPTKVVIASIMCTY 664
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
N+ W EL R E G D +E+N SCPHGM E MG A GQD +L+ + W+ A +P
Sbjct: 665 NEEDWTELAKRAEAAGADMLELNLSCPHGMGESGMGLACGQDPKLVYNISLWVRAAVKIP 724
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLR-PEPCVEGYSTPGGY 279
+ K+TPNITDI A+ A R ++GVSAINT+ +M I T P V+ +T GG
Sbjct: 725 FFVKLTPNITDIVAIAQAAQRGKADGVSAINTVQGLMSIKADTTPWPAVGVDKRTTYGGV 784
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A P AL + I M + + GIGG+++ A +FI GA +Q+C+ +
Sbjct: 785 SGNATRPQALRAISLIGNKMPG------FPICGIGGIDSADVALQFIQCGAPILQICSSI 838
Query: 340 MMHGYGLVKRLCEELKDFMKM 360
+ +V+ LK + +
Sbjct: 839 QNQDFTVVEDYILGLKALLYL 859
>gi|313232715|emb|CBY19385.1| unnamed protein product [Oikopleura dioica]
Length = 1278
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 183/324 (56%), Gaps = 12/324 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + G++ PNPF + S PP TN +++R+F+ GWG V KT D V NV PR
Sbjct: 780 DISVEICGVRFPNPFGLASAPPTTNSAMIRRSFEAGWGFTVTKTFGCDHDLVTNVAPRIT 839
Query: 106 RLRAGANGSAKGQIIG-WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
R +G G +G + NIELIS++ E + ++LK +P+KI+I+SIM YNK
Sbjct: 840 R--GTTSGHQYGPGLGSFINIELISEKSAEYWYRSIRELKDDFPEKIVISSIMASYNKED 897
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+EL + G D +E+N SCPHGM ER MG A GQ+ ++ + W+ TVP + K
Sbjct: 898 WQELAIGSCKAGADMLELNLSCPHGMGERGMGLACGQNTDMVYNISKWVKEVTTVPFFPK 957
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGGYSCK 282
MTPNITDIT A+ A G++GV+A NT+ +M I P P V E +T GG +
Sbjct: 958 MTPNITDITTIAQAAKDGGADGVTATNTVSGLMQIKGDGT-PWPGVGSEKKTTYGGVAGN 1016
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ PIA+ V +IA+ + + + GG+++ + ++ GA+ +QVC+ V
Sbjct: 1017 AIRPIAMKAVSAIARAIPG------FPILATGGIDSADVSMQYFNAGASAMQVCSAVQNQ 1070
Query: 343 GYGLVKRLCEELKDFMKMHNFSSI 366
Y +V+ LK + + SSI
Sbjct: 1071 DYTVVQDYISGLKTLLYLKGKSSI 1094
>gi|47211504|emb|CAF94123.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1103
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 134/409 (32%), Positives = 208/409 (50%), Gaps = 47/409 (11%)
Query: 40 SASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVIN 99
SA + D+S+ V G++ PNPF + S PP T+ +++R F++GWG V KT LD V N
Sbjct: 599 SAIDQVDISVEVCGIKFPNPFGLASAPPTTSAAMIRRGFEQGWGFAVTKTFGLDKDLVTN 658
Query: 100 VTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEE 159
V+PR R N GQ + NIELIS++ + +LK +P+ ++I+SIM
Sbjct: 659 VSPRIVRGTTSGNVYGPGQG-SFLNIELISEKTAAYWCQSVAELKRSFPNNVVISSIMCS 717
Query: 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAV------GQDCRLLEEVCGWI 213
YNK W EL E++G DA+E+N SCPHGM ER MG A QD L+ +C W+
Sbjct: 718 YNKEDWTELAKMAEDSGADALELNLSCPHGMGERGMGLACDVIYVFDQDPVLVRNICRWV 777
Query: 214 NAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--E 271
A ++P +AK+TPN+T+I + A+ A G+ GV+A NT+ +MG+ P P V
Sbjct: 778 RAAVSIPFFAKLTPNVTNIVDIAKAAHEGGANGVTATNTVSGMMGLKADG-APWPSVGKG 836
Query: 272 GYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 331
+T GG S A+ PIAL V +IA+ + + + GG+++ +F+ GA+
Sbjct: 837 KRTTYGGVSGNAIRPIALRAVSAIARAIPG------FPILATGGIDSADTGLQFLHAGAS 890
Query: 332 TVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS---------------------SIEDFR 370
+QVC+ V ++ C LK + + + + +ED
Sbjct: 891 VLQVCSAVQNQDLTVIGDYCVGLKALLYLKSLNLNTWDGQSPPTEKHQKGKPVPKLEDLI 950
Query: 371 GASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLSM 419
G ++ F + ++ ++EAI K K G +VKE S+
Sbjct: 951 GKNVPSFGPY---LKKRREAIADYKKKLKD-------AGKDYVKEPTSI 989
>gi|294674486|ref|YP_003575102.1| dihydroorotate oxidase [Prevotella ruminicola 23]
gi|294472971|gb|ADE82360.1| dihydroorotate oxidase [Prevotella ruminicola 23]
Length = 398
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 185/345 (53%), Gaps = 21/345 (6%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
+ L IT G+ NPF + S TNY ++ RAF+ GW V KT+ + V+PR
Sbjct: 2 QQSLGITFCGIDCENPFFLASSAVCTNYDMVARAFEAGWAGVFYKTIC--KQDIREVSPR 59
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ ++ G G+ N+E +S+ P + ++LK YP K++IASIM ++ +
Sbjct: 60 FDAVKKGTT------FAGFRNMEQLSENPYQVDFDILRRLKQNYPTKVVIASIMGQFEEE 113
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
W EL EE G DAIE+NFSCP M MG+ +GQD L+ ++ +PV
Sbjct: 114 -WIELAKLAEEAGCDAIELNFSCPQ-MRLAGMGSDIGQDPELVNFYTSYVKRSVKIPVIP 171
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
KMTPNIT +T PA A +G++ +SAINTI SV T+ E V G T GYS +A
Sbjct: 172 KMTPNITQMTRPAMGAYFAGADAISAINTIKSV------TMSKEAEVSGKQTLSGYSGQA 225
Query: 284 VHPIALGKVMSIAKMMKSEFND---KDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
V PIAL ++ ++ M N + LSGIGG+ET DA +FI LG VQVCT VM
Sbjct: 226 VKPIALRFILEMS--MDPVINGTHGRAIELSGIGGIETWRDAVDFIQLGCRNVQVCTAVM 283
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+GY ++ L L+ ++ F ++D G + F ++L R
Sbjct: 284 QYGYRIIDDLVSGLQTYLTERGFEKLDDLVGEQLPNFVRPSDLDR 328
>gi|281208037|gb|EFA82215.1| dihydropyrimidine dehydrogenase [Polysphondylium pallidum PN500]
Length = 1012
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 180/330 (54%), Gaps = 10/330 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S G++ NPF + S P T+ +++R+F++GWG V KT SLD V NV+PR
Sbjct: 531 DISSDFCGIKFENPFGLASATPCTSAAMIRRSFEQGWGFAVTKTFSLDKDLVTNVSPRIV 590
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R + GQ + NIELIS++ K +LK +P K++IASIM +NK W
Sbjct: 591 RGTTSGHHFGPGQG-AFLNIELISEKTCHYWCKAVTELKRDFPSKVVIASIMCGFNKEDW 649
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL E +G DA+E+N SCPHGM ER MG A GQ+ L+ +C W+ +P +AK+
Sbjct: 650 QELAKMAEASGADALELNLSCPHGMGERGMGLACGQNPDLVLHICKWVREAIKIPFFAKL 709
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGGYSCKA 283
TPN+T++ E A A G+ GV+AINT+ +M + P P + E +T GG S A
Sbjct: 710 TPNVTEVKEIALAAYNGGATGVTAINTVSGLMSLK-GDASPWPAIGKEKRTTYGGVSGNA 768
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
P+AL V SI + + D+ + GG ++ +F+ GA +Q+C+ V
Sbjct: 769 TRPMALRAVSSIRRTL------PDFPIMATGGADSADTCIQFLHCGAGVIQICSAVQNQD 822
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +V+ LK ++ M + + + G S
Sbjct: 823 FTVVQDYITGLKAYLYMQSREDLAQWDGQS 852
>gi|389609435|dbj|BAM18329.1| suppressor of rudimentary [Papilio xuthus]
Length = 583
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 125/324 (38%), Positives = 179/324 (55%), Gaps = 14/324 (4%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
E DLS+ V G++ NPF + S PP T+ +++RAF +GWG V KT LD V NV+PR
Sbjct: 78 EVDLSVEVCGIKFENPFGLASAPPTTSSAMIRRAFQQGWGFAVTKTFGLDKDLVTNVSPR 137
Query: 104 YAR-LRAGAN-GSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYN 161
R + +G N G +G + NIELIS++ + +LK +P+K++IASIM YN
Sbjct: 138 IVRGVTSGENYGPGQGSFL---NIELISEKCEAYWCQSIAELKRDFPNKVVIASIMCSYN 194
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
+ W EL + E G DA+E+N SCPHGM E MG A GQD L++ + W+ +P
Sbjct: 195 EQDWTELARKAEAAGSDALELNLSCPHGMGESGMGLACGQDPVLVKGISQWVRKAIKIPF 254
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGY--STPGGY 279
+ K+TPNITDI A A G+ GVSAINT+ +M + P P V +T GG
Sbjct: 255 FIKLTPNITDIVSIAMAAHEGGAYGVSAINTVSGLMSVTANA-TPWPAVGNTKSTTYGGV 313
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A P+ L V +IA + + + GIGG+++ A +FIL GA VQ+C+ V
Sbjct: 314 SGNATRPMGLRAVSAIANKLPG------FPILGIGGIDSADSAFQFILCGAPVVQICSAV 367
Query: 340 MMHGYGLVKRLCEELKDFMKMHNF 363
+ +V LK + + +
Sbjct: 368 QNQDFTVVDDYITGLKALLYLRSL 391
>gi|313213832|emb|CBY40684.1| unnamed protein product [Oikopleura dioica]
Length = 711
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 183/324 (56%), Gaps = 12/324 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + G++ PNPF + S PP TN +++R+F+ GWG V KT D V NV PR
Sbjct: 213 DISVEICGVRFPNPFGLASAPPTTNSAMIRRSFEAGWGFTVTKTFGCDHDLVTNVAPRIT 272
Query: 106 RLRAGANGSAKGQIIG-WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
R +G G +G + NIELIS++ E + ++LK +P+KI+I+SIM YNK
Sbjct: 273 R--GTTSGHQYGPGLGSFINIELISEKSAEYWYRSIRELKDDFPEKIVISSIMASYNKED 330
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+EL + G D +E+N SCPHGM ER MG A GQ+ ++ + W+ TVP + K
Sbjct: 331 WQELAIGSCKAGADMLELNLSCPHGMGERGMGLACGQNTDMVYNISKWVKEVTTVPFFPK 390
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGGYSCK 282
MTPNITDIT A+ A G++GV+A NT+ +M I P P V E +T GG +
Sbjct: 391 MTPNITDITTIAQAAKDGGADGVTATNTVSGLMQIKGDG-TPWPGVGSEKKTTYGGVAGN 449
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ PIA+ V +IA+ + + + GG+++ + ++ GA+ +QVC+ V
Sbjct: 450 AIRPIAMKAVSAIARAIPG------FPILATGGIDSADVSMQYFNAGASAMQVCSAVQNQ 503
Query: 343 GYGLVKRLCEELKDFMKMHNFSSI 366
Y +V+ LK + + SSI
Sbjct: 504 DYTVVQDYISGLKTLLYLKGKSSI 527
>gi|298376819|ref|ZP_06986774.1| dihydroorotate dehydrogenase family protein [Bacteroides sp.
3_1_19]
gi|298266697|gb|EFI08355.1| dihydroorotate dehydrogenase family protein [Bacteroides sp.
3_1_19]
Length = 497
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 184/350 (52%), Gaps = 13/350 (3%)
Query: 38 SDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKV 97
S ++ PDL+I G++ NPF++ S P NY + RA + GW + KT+S +
Sbjct: 101 SSPLTSSPDLAIDFCGVRCANPFILASSPVAHNYEMCVRALEAGWAGICFKTISFYPSH- 159
Query: 98 INVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM 157
V+PR+ ++ IG++N+E +S+ +E +LK YPDK++I+SIM
Sbjct: 160 -EVSPRFDQMEVDGV-----PFIGFKNMEQLSEASVEENFDTLYRLKQRYPDKLIISSIM 213
Query: 158 EEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA 217
+ W L + G D IE NFSCP M + MG+ VGQ L+
Sbjct: 214 GRTDDE-WTRLAQYSMQAGADIIECNFSCPQ-MTQEGMGSDVGQSPELVRRFTAATRRGT 271
Query: 218 TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277
+P+ AKMTPNI +T A A G+ G++AINTI + ID K P V G S+
Sbjct: 272 HLPILAKMTPNIGQMTPVALAAHEGGATGIAAINTIKCITRIDEKAFTARPVVSGLSSVS 331
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
GYS +AV PIAL + +A S+ + +SGIGG+ET DA +F+LLG +Q+CT
Sbjct: 332 GYSGRAVRPIALRFIHELA----SDPSAGKMPISGIGGIETWRDALDFLLLGCTNLQICT 387
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQ 387
VM +G+ ++ LCE L+ FM+ + + + D G ++ L R Q
Sbjct: 388 AVMQYGFRIIDDLCEGLRLFMQENGYKDLSDLIGIALPNIVPPERLERTQ 437
>gi|312383321|gb|EFR28456.1| hypothetical protein AND_03577 [Anopheles darlingi]
Length = 1672
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 178/318 (55%), Gaps = 12/318 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ V G++ NPF + S PP T+ +++RAF++GWG V KT +LD V NV+PR
Sbjct: 1164 DLSVEVCGVRFENPFGLASAPPTTSTAMIRRAFEQGWGFAVTKTFALDKDVVTNVSPRIV 1223
Query: 106 R-LRAG-ANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
R + AG + G +G + NIELIS++ + L ++LK +P K+LIASIM YN+
Sbjct: 1224 RGVTAGHSYGPQQGAFL---NIELISEKCPDYWLAGIRELKRDFPTKVLIASIMCTYNEQ 1280
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
W EL R E G D +E+N SCPHGM E MG A GQD L+ + W+ +P +
Sbjct: 1281 DWTELARRAETAGADMLELNLSCPHGMGESGMGLACGQDPELVYNISVWVRRAVRIPFFV 1340
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGYSCK 282
K+TPNITDI A+ A R ++GVSAINT+ +M + T P + +T GG S
Sbjct: 1341 KLTPNITDIVAIAQAAQRGQADGVSAINTVQGLMSLRTDGTPWPAVGIHKRTTYGGVSGN 1400
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A P AL V I + + + GIGG+++ A +FI GA +Q+C+ V
Sbjct: 1401 ATRPQALRAVSLIGNKLPG------FPICGIGGIDSADVALQFIQCGAPILQICSSVQNQ 1454
Query: 343 GYGLVKRLCEELKDFMKM 360
+ +++ LK + +
Sbjct: 1455 DFTVIEDYVTGLKALLYL 1472
>gi|437631394|ref|ZP_20806388.1| dihydropyrimidine dehydrogenase subunit B, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
gi|435283467|gb|ELO61032.1| dihydropyrimidine dehydrogenase subunit B, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str. 648904
3-6]
Length = 264
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/273 (43%), Positives = 163/273 (59%), Gaps = 13/273 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKM
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 235
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVET 318
PIAL + + M E +D+ +SGIGG+ET
Sbjct: 236 PIALRFIQQLR--MHPEL--RDFPISGIGGIET 264
>gi|384108877|ref|ZP_10009765.1| dihydroorotate dehydrogenase (subfamily 1) family protein
[Treponema sp. JC4]
gi|383869581|gb|EID85192.1| dihydroorotate dehydrogenase (subfamily 1) family protein
[Treponema sp. JC4]
Length = 503
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/354 (37%), Positives = 203/354 (57%), Gaps = 17/354 (4%)
Query: 33 LRVLASDSASAEP----DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAK 88
+R L D SA+ L + G+ + NPF++ S + Y + RAF+ GW K
Sbjct: 87 VRALPHDVESADAVDFTCLKSDICGIPIENPFLLSSSVVASTYDMCARAFEAGWAGACFK 146
Query: 89 TVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYP 148
T+ + + +PR++ L N IG++NIE +SD +E ++ F+QLK YP
Sbjct: 147 TIC--SFPIHECSPRFSSLEGDNN-----SFIGFKNIEQLSDHSVEENMEIFRQLKEKYP 199
Query: 149 DKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEE 208
K ++ASIM + N+ W L + EE G DAIE+NFSCP+ M + +G+ +GQ L+E
Sbjct: 200 SKFILASIMGQ-NEEEWGTLSKKCEEAGADAIELNFSCPN-MADEGLGSDIGQVPELVES 257
Query: 209 VCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEP 268
+ +PV AK+TPN+ +++ A A + G++G+SAINTI SV G++L T P
Sbjct: 258 FTRAAKSACKIPVIAKLTPNVANMSPAAEAAKKGGADGISAINTIKSVTGVNLHTYVSAP 317
Query: 269 CVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILL 328
V G S GGYS AV PIAL IA++ ++ + + ++G+GG+E DAAEFILL
Sbjct: 318 SVHGKSALGGYSGTAVKPIAL---RFIAELGLNKNLNNLH-ITGMGGIENWTDAAEFILL 373
Query: 329 GANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTE 382
GA ++Q+ T VM +GY +++ L L +M F SI + +G S++ F +T+
Sbjct: 374 GAGSLQITTAVMKYGYRIIEDLKSGLALYMNQKGFKSISEMKGLSLDSFYLNTD 427
>gi|330795628|ref|XP_003285874.1| dihydropyrimidine dehydrogenase [Dictyostelium purpureum]
gi|325084179|gb|EGC37613.1| dihydropyrimidine dehydrogenase [Dictyostelium purpureum]
Length = 944
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/329 (36%), Positives = 182/329 (55%), Gaps = 8/329 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + G+ PNPF + S P T+ +++R+F++GWG V KT SLD V N +PR
Sbjct: 465 DISVEMCGMTFPNPFGLASATPATSAAMIRRSFEQGWGFAVTKTFSLDKDLVTNCSPRIV 524
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R + GQ + NIELIS++ K +LK +P I+IASIM +NK W
Sbjct: 525 RGTTSGHHFGPGQG-AFLNIELISEKTCAYWCKAVTELKRDFPKHIVIASIMCGFNKEDW 583
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EL + E +G D +E+N SCPHGM E+ MG A GQD L+ +C W+ A +P +AK+
Sbjct: 584 TELAKKAEASGADGLELNLSCPHGMGEKGMGLACGQDTELVFHICQWVRAAVKIPFFAKL 643
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKT-LRPEPCVEGYSTPGGYSCKAV 284
TPN+T+I + A+ A G++GV+AINT+ +MG+ + P E +T GG S A
Sbjct: 644 TPNVTEIKDIAKAAHDGGADGVTAINTVSGLMGLKGDSNAWPAIGDEKRTTYGGVSGNAT 703
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
P+AL V SI K + DY + GG ++ +F+ GA+ VQ+C+ V +
Sbjct: 704 RPMALRAVSSIRKTL------PDYPIMATGGCDSADATIQFLHCGASVVQICSSVQNQDF 757
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+V LK ++ M + + + G S
Sbjct: 758 TVVGDYITGLKTYLYMQSREDLLKWDGQS 786
>gi|406911198|gb|EKD51042.1| hypothetical protein ACD_62C00358G0002 [uncultured bacterium]
Length = 413
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 191/354 (53%), Gaps = 17/354 (4%)
Query: 42 SAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAA-KVINV 100
+ +P+L I G+ NPF + S P + + +RA+D GWG +V KT++L++ KV+
Sbjct: 2 ATKPNLKINFCGVTCENPFFLSSSPVSNSAEMCERAYDAGWGGIVYKTLNLESKFKVVMP 61
Query: 101 TPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
+PR + + + + +N E I+DRP++ + + LK YP+K+L++SIM Y
Sbjct: 62 SPRLSAMHC-----EDKRFVCLQNAEQITDRPIKDNIADIAYLKKKYPNKVLVSSIMG-Y 115
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
A WE L E+ G D +E+NFSCP M + G VGQ+ + C + +P
Sbjct: 116 ENADWELLAKMSEDAGADMLELNFSCPQ-MARKDAGHRVGQNYDAVSHFCEATKKGSRLP 174
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
V AKMTPNITD+ A A G++ +SAINTI + ID++ P P + G S+ G S
Sbjct: 175 VIAKMTPNITDMVPVALAAKEGGADAISAINTIRGITDIDVENFVPCPTIHGQSSITGCS 234
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSL--SGIGGVETGGDAAEFILLGANTVQVCTG 338
A P+AL + + +N K+ SL SGIGG+ T DA +F L GA VQV T
Sbjct: 235 GWAAKPVAL-------RFVSELYNSKELSLPVSGIGGITTWRDALQFFLCGATNVQVTTA 287
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQ 392
+M +GY +V+ + E L D+M H +S+ + G + + +EL Q Q
Sbjct: 288 IMRYGYRIVEDMIEGLSDWMIDHKITSLNEIIGNAAKKLIDPSELNNRYQVVSQ 341
>gi|432103874|gb|ELK30707.1| Dihydropyrimidine dehydrogenase [NADP+] [Myotis davidii]
Length = 698
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 125/371 (33%), Positives = 185/371 (49%), Gaps = 51/371 (13%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ T+++RAF+ GWG + KT SLD V NV+PR
Sbjct: 164 DISVEMAGLRFINPFGLASATPATSTTMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 223
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R GQ + NIELIS++ + +LKA +PD++LIASIM YN+ W
Sbjct: 224 RGTTSGPSYGPGQS-SFLNIELISEKTAAYWCQSVAELKADFPDRVLIASIMCSYNRNDW 282
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P +AK+
Sbjct: 283 MELASMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAIRIPFFAKL 342
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG--YSTPGGYSCK- 282
TPN+TDI AR A G++GV+A NT+ +MG+ P P V +T GG S
Sbjct: 343 TPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLRADGT-PWPAVGAGKRTTYGGVSGHR 401
Query: 283 ----------------------------------------AVHPIALGKVMSIAKMMKSE 302
A+ PIAL V SIA+ +
Sbjct: 402 RTYHPAFKKQQRLVRKEHDALTQEDDIIDLGPGWRGSLGTAIRPIALRAVTSIARALPG- 460
Query: 303 FNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHN 362
+ + GG+++ +F+ GA+ +QVC+ V + +++ C L+ + +
Sbjct: 461 -----FPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQDFTVIEDYCTGLRALLYLQA 515
Query: 363 FSSIEDFRGAS 373
+ D+ G S
Sbjct: 516 IEELRDWDGQS 526
>gi|417512007|ref|ZP_12176455.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Senftenberg str. A4-543]
gi|353641190|gb|EHC85985.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Senftenberg str. A4-543]
Length = 365
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 178/303 (58%), Gaps = 13/303 (4%)
Query: 100 VTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEE 159
V+PR+ L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E
Sbjct: 11 VSPRFDHLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE 65
Query: 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219
N+ W+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++
Sbjct: 66 -NEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSL 123
Query: 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279
P+ AKMTPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GY
Sbjct: 124 PMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGY 183
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S KAV PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+
Sbjct: 184 SGKAVKPIALRFIQQLR--MHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGI 239
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR--MQQEAIQQRKAV 397
M +GY +V+ + L ++ F+S+++ G + + EL R + I Q K V
Sbjct: 240 MQYGYRIVEDMASGLSHYLADQGFASLQEMIGLANDNIIPAEELDRSYIVYPRINQEKCV 299
Query: 398 RKG 400
G
Sbjct: 300 GCG 302
>gi|195355035|ref|XP_002043999.1| GM13670 [Drosophila sechellia]
gi|194129244|gb|EDW51287.1| GM13670 [Drosophila sechellia]
Length = 922
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 179/305 (58%), Gaps = 12/305 (3%)
Query: 24 GLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWG 83
GL L + L + +D + D+S+ + G++ NPF + S PP T+ +++RAF++GWG
Sbjct: 507 GLPLDTPAALPLFYTDIDAV--DISVEMCGIRFENPFGLASAPPTTSTAMIRRAFEQGWG 564
Query: 84 AVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-WENIELISDRPLETMLKEFKQ 142
VV KT LD V NV+PR +R +G G G + NIELIS++ E LK +
Sbjct: 565 FVVTKTFGLDKDLVTNVSPRI--VRGTTSGYKYGPQQGCFLNIELISEKRAEYWLKSIGE 622
Query: 143 LKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQD 202
LK +P+KI+IASIM +N+ W EL + E++G DA+E+N SCPHGM ER MG A GQD
Sbjct: 623 LKRDFPEKIVIASIMCSFNEDDWTELAIKAEQSGADALELNLSCPHGMGERGMGLACGQD 682
Query: 203 CRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDL- 261
L+E++ W+ +P + K+TPNITDI A A R G++G SAINT+ +MG+
Sbjct: 683 PELVEQISRWVRKAVKLPFFIKLTPNITDIVSIAAAAKRGGADGGSAINTVQGLMGLKAD 742
Query: 262 KTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGD 321
T P E +T GG S A P+AL + IA + + + GIGG+++G
Sbjct: 743 STAWPAIGKEQRTTYGGVSGNATRPMALKAISDIANRVPG------FLILGIGGIDSGEV 796
Query: 322 AAEFI 326
A +FI
Sbjct: 797 ALQFI 801
>gi|345856721|ref|ZP_08809193.1| dihydroorotate dehydrogenase family domain protein
[Desulfosporosinus sp. OT]
gi|344330233|gb|EGW41539.1| dihydroorotate dehydrogenase family domain protein
[Desulfosporosinus sp. OT]
Length = 394
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 193/356 (54%), Gaps = 17/356 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ GL++ NPFV+ P N ++ +AF+ GW V KT+++D++ V V P
Sbjct: 4 DLSVKFCGLRLENPFVLAPSPSTDNLDLLIQAFEAGWAGAVLKTIAVDSSIVSRVFPLVM 63
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R+ G + IG +NI+L+S+ +E + LK +P+K++I SIM + W
Sbjct: 64 RIEQGDS------FIGLQNIDLVSEHSVEDVEHIVIALKKRFPNKVVIPSIMAS-TREDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWIN-AKATVPVWAK 224
+ L R + G D IE + CPHG E + + V Q+ E++ W+ VPV K
Sbjct: 117 QSLAKRFVDAGADIIECSIWCPHG-AEWSLCSMV-QEPVGTEQIARWVKEVTGDVPVVIK 174
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
++ +DI A RSG++GV AINTI S+ G++L TL P P V G ST GG S A+
Sbjct: 175 LSAQDSDIIATAAAVERSGADGVCAINTIKSITGVNLSTLIPYPNVAGLSTYGGLSGPAL 234
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL IA+ + + ++ GG+ T D AEF+LLGA+T+Q+CT V+ G
Sbjct: 235 KPIALRCTAEIAQKV-------NLDIASSGGITTWQDGAEFLLLGASTLQLCTAVLRFGI 287
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKG 400
G++K L + L +MK F S+ D G S+ Y H++L R Q RK V G
Sbjct: 288 GIIKDLTQGLAGWMKEMGFQSLTDVIGRSLPYLVEHSQLPRGIQFVAHIRKEVCDG 343
>gi|417366425|ref|ZP_12138718.1| dihydropyrimidine dehydrogenase, partial [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
gi|353591971|gb|EHC50108.1| dihydropyrimidine dehydrogenase, partial [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
Length = 371
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 167/272 (61%), Gaps = 11/272 (4%)
Query: 100 VTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEE 159
V+PR+ L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E
Sbjct: 17 VSPRFDHLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE 71
Query: 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219
N+ W+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++
Sbjct: 72 -NEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSL 129
Query: 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279
P+ AKMTPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GY
Sbjct: 130 PMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGY 189
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S KAV PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+
Sbjct: 190 SGKAVKPIALRFIQQL--RMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGI 245
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
M +GY +V+ + L ++ F+S+++ G
Sbjct: 246 MQYGYRIVEDMASGLSHYLADQGFASLQEMIG 277
>gi|417540393|ref|ZP_12192433.1| dihydropyrimidine dehydrogenase, partial [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|353662760|gb|EHD01657.1| dihydropyrimidine dehydrogenase, partial [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
Length = 371
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 167/272 (61%), Gaps = 11/272 (4%)
Query: 100 VTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEE 159
V+PR+ L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E
Sbjct: 17 VSPRFDHLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE 71
Query: 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219
N+ W+EL VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++
Sbjct: 72 -NEQQWQELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSL 129
Query: 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279
P+ AKMTPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GY
Sbjct: 130 PMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGY 189
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S KAV PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+
Sbjct: 190 SGKAVKPIALRFIQQL--RMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGI 245
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
M +GY +V+ + L ++ F+S+++ G
Sbjct: 246 MQYGYRIVEDMASGLSHYLADQGFASLQEMIG 277
>gi|391327121|ref|XP_003738055.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like isoform 3
[Metaseiulus occidentalis]
Length = 1039
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/335 (34%), Positives = 179/335 (53%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+ +TV G++ NPF + S PP T +++RAF GWG + KT LD V NV+PR
Sbjct: 533 DIGVTVCGIKFKNPFGLASAPPTTTSAMIRRAFQNGWGFALTKTFGLDKDVVTNVSPRIV 592
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ K+LK +PD ++IASIM Y
Sbjct: 593 R------GTTSGHVYGPGQGSFLNIELISEKTSAYWCASVKELKRDFPDHVVIASIMCAY 646
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+ W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 647 IQEDWIELAKLAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICSWVRGAVKIP 706
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPC--VEGYSTPGG 278
++AK+TPN+T+I AR A ++GV+A NT+ +M + K P P VE +T GG
Sbjct: 707 IFAKLTPNVTNIVVIARAAYEGKADGVTATNTVSGLMSLSGKG-DPWPAVGVEKRTTYGG 765
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
A+ PIAL V +IA + + + GG+++ +F+ GA+ +Q+C+
Sbjct: 766 VCGNAIRPIALRAVSAIANALPG------FPILATGGIDSADAGLQFLQAGASVLQICSS 819
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V + ++ LK + + + +++ S
Sbjct: 820 VQNQDFTVIDDYITGLKCDLYLKSLEQCQNWDNQS 854
>gi|391327119|ref|XP_003738054.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like isoform 2
[Metaseiulus occidentalis]
Length = 1031
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/335 (34%), Positives = 179/335 (53%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+ +TV G++ NPF + S PP T +++RAF GWG + KT LD V NV+PR
Sbjct: 533 DIGVTVCGIKFKNPFGLASAPPTTTSAMIRRAFQNGWGFALTKTFGLDKDVVTNVSPRIV 592
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ K+LK +PD ++IASIM Y
Sbjct: 593 R------GTTSGHVYGPGQGSFLNIELISEKTSAYWCASVKELKRDFPDHVVIASIMCAY 646
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+ W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 647 IQEDWIELAKLAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICSWVRGAVKIP 706
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPC--VEGYSTPGG 278
++AK+TPN+T+I AR A ++GV+A NT+ +M + K P P VE +T GG
Sbjct: 707 IFAKLTPNVTNIVVIARAAYEGKADGVTATNTVSGLMSLSGKG-DPWPAVGVEKRTTYGG 765
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
A+ PIAL V +IA + + + GG+++ +F+ GA+ +Q+C+
Sbjct: 766 VCGNAIRPIALRAVSAIANALPG------FPILATGGIDSADAGLQFLQAGASVLQICSS 819
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V + ++ LK + + + +++ S
Sbjct: 820 VQNQDFTVIDDYITGLKCDLYLKSLEQCQNWDNQS 854
>gi|391327117|ref|XP_003738053.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like isoform 1
[Metaseiulus occidentalis]
Length = 1032
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/335 (34%), Positives = 179/335 (53%), Gaps = 20/335 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+ +TV G++ NPF + S PP T +++RAF GWG + KT LD V NV+PR
Sbjct: 533 DIGVTVCGIKFKNPFGLASAPPTTTSAMIRRAFQNGWGFALTKTFGLDKDVVTNVSPRIV 592
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ K+LK +PD ++IASIM Y
Sbjct: 593 R------GTTSGHVYGPGQGSFLNIELISEKTSAYWCASVKELKRDFPDHVVIASIMCAY 646
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+ W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 647 IQEDWIELAKLAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICSWVRGAVKIP 706
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPC--VEGYSTPGG 278
++AK+TPN+T+I AR A ++GV+A NT+ +M + K P P VE +T GG
Sbjct: 707 IFAKLTPNVTNIVVIARAAYEGKADGVTATNTVSGLMSLSGKG-DPWPAVGVEKRTTYGG 765
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
A+ PIAL V +IA + + + GG+++ +F+ GA+ +Q+C+
Sbjct: 766 VCGNAIRPIALRAVSAIANALPG------FPILATGGIDSADAGLQFLQAGASVLQICSS 819
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V + ++ LK + + + +++ S
Sbjct: 820 VQNQDFTVIDDYITGLKCDLYLKSLEQCQNWDNQS 854
>gi|417718014|ref|ZP_12366915.1| hypothetical protein SFK227_2748 [Shigella flexneri K-227]
gi|333016869|gb|EGK36193.1| hypothetical protein SFK227_2748 [Shigella flexneri K-227]
Length = 367
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/272 (43%), Positives = 164/272 (60%), Gaps = 11/272 (4%)
Query: 100 VTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEE 159
V+PR+ L G IG++N+E I++ PL L ++LK YPDK+LIASIM E
Sbjct: 13 VSPRFDHLVKEDTG-----FIGFKNMEQIAEHPLGENLTALRRLKEDYPDKVLIASIMGE 67
Query: 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219
N+ WEEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+
Sbjct: 68 -NEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTL 125
Query: 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279
P+ AKMTPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GY
Sbjct: 126 PMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGY 185
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S K V PIAL + M++ +D+ +SGIGG+ET DAAEF+LLGA T QV TG+
Sbjct: 186 SGKVVKPIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATSQVTTGI 241
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
M +GY +V+ + L ++ F S+++ G
Sbjct: 242 MQYGYRIVEDMASGLSHYLADQGFDSLQEMVG 273
>gi|325289503|ref|YP_004265684.1| dihydroorotate oxidase B, catalytic subunit [Syntrophobotulus
glycolicus DSM 8271]
gi|324964904|gb|ADY55683.1| dihydroorotate oxidase B, catalytic subunit [Syntrophobotulus
glycolicus DSM 8271]
Length = 502
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 128/361 (35%), Positives = 193/361 (53%), Gaps = 27/361 (7%)
Query: 25 LRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGA 84
RLP +I +L I G+ NPF + S +NYT++ +AF+ GW
Sbjct: 99 FRLPGKI--------------NLGIEFCGIPCENPFFLSSSVVASNYTMVAKAFEMGWAG 144
Query: 85 VVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLK 144
V KT+ + V+PR++ + G G++NIE ISD LE L+ +LK
Sbjct: 145 AVFKTIGTFVPQ--EVSPRFSSI-----GKEGNSFSGFKNIEQISDHTLEENLEFMSRLK 197
Query: 145 ALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCR 204
+P K+++ASI+ + ++ W L +V E G+D IE NFSCPH M +G+ VGQ
Sbjct: 198 RDFPHKVVVASILGQ-DEEEWTFLARKVTEAGVDIIECNFSCPH-MTGEGLGSDVGQSPE 255
Query: 205 LLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTL 264
L+ +P+ AKMTPNI ++ PA A+ +G+ G++AINTI S+M I+L
Sbjct: 256 LVALYTAATRKGTDLPILAKMTPNIGNMEIPAIAAMENGATGIAAINTIKSIMNINLDDF 315
Query: 265 RPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAE 324
EP V+G S GGYS K V PIAL + + K K K+ +SG+GG+ET DAAE
Sbjct: 316 VSEPRVDGKSCVGGYSGKTVKPIALRFIHDMKKHPKL----KECPISGMGGIETWRDAAE 371
Query: 325 FILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELV 384
FI +G VQ+ T VM +GY +++ + L F+ + S+++ G ++ +L
Sbjct: 372 FIAMGCANVQITTSVMQYGYRIIEDFIDGLTAFLSEKGYHSLQEIIGLALPNVVQADQLN 431
Query: 385 R 385
R
Sbjct: 432 R 432
>gi|58376848|ref|XP_309214.2| AGAP001021-PA [Anopheles gambiae str. PEST]
gi|347964950|ref|XP_003437170.1| AGAP001021-PB [Anopheles gambiae str. PEST]
gi|55245087|gb|EAA04946.2| AGAP001021-PA [Anopheles gambiae str. PEST]
gi|333466553|gb|EGK96290.1| AGAP001021-PB [Anopheles gambiae str. PEST]
Length = 1039
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 180/320 (56%), Gaps = 14/320 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ V G++ NPF + S PP T+ +++RAF++GWG V KT +LD V NV+PR
Sbjct: 530 DLSVEVCGVRFENPFGLASAPPTTSTAMIRRAFEQGWGFAVTKTFALDKDMVTNVSPRIV 589
Query: 106 R-LRAGAN-GSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
R + AG + G +G + NIELIS++ + L ++LK +P ++LIASIM Y++
Sbjct: 590 RGVTAGQHYGPQQGAFL---NIELISEKCCDYWLTGIRELKRDFPSRVLIASIMCTYSEP 646
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
W EL R E G D +E+N SCPHGM E MG A GQD L+ + W+ +P +
Sbjct: 647 DWIELASRAEAAGADMLELNLSCPHGMGESGMGLACGQDPELVYNISRWVRGAVRIPFFV 706
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGGYSC 281
K+TPNITDI A+ A R ++GVSAINT+ +M + P P V + +T GG S
Sbjct: 707 KLTPNITDIVSIAQAAKRGQADGVSAINTVQGLMSLRADG-SPWPAVGADRRTTYGGVSG 765
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
A P A+ + IA + + + GIGG+++ A +FI GA +Q+C+ V
Sbjct: 766 NATRPQAMRAISLIANKLPG------FPICGIGGIDSAEVALQFIQCGAPILQICSSVQN 819
Query: 342 HGYGLVKRLCEELKDFMKMH 361
+ +++ LK + +
Sbjct: 820 QDFTVIEDYILGLKALLYLR 839
>gi|224537012|ref|ZP_03677551.1| hypothetical protein BACCELL_01888 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521379|gb|EEF90484.1| hypothetical protein BACCELL_01888 [Bacteroides cellulosilyticus
DSM 14838]
Length = 494
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/361 (34%), Positives = 194/361 (53%), Gaps = 14/361 (3%)
Query: 42 SAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT 101
S + +LS+ G++ NPF + S P +++ + AFD GW V KT+S ++ V+
Sbjct: 97 STQAELSVNFCGIRCENPFFLASSPVASSFEMCCHAFDAGWAGVSYKTISFYQSR--EVS 154
Query: 102 PRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYN 161
PR+ L G G++N+E +S E + ++LK YP+K++IASIM N
Sbjct: 155 PRFDAL----PGEHPFSFCGFKNLEQLSPHSAEENFEIIRRLKERYPEKVIIASIMGR-N 209
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
W L EE G D IE NFSCP M ++ +G+ +GQD L+ + +P+
Sbjct: 210 CDEWTVLARMAEEAGADLIECNFSCPQ-MAKQGLGSDIGQDQDLIALYTRATRKGSRLPI 268
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
AKMTPNI ++ PA A+ +G+ ++AINT+ S+ I+ + P + G S GGYS
Sbjct: 269 IAKMTPNIGNMELPAMTAIANGANSLAAINTVKSITRINTENFSSYPDIGGQSAVGGYSG 328
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
+AV PIAL + +A K L GIGG+ T DA +FILLG +QVCT VM
Sbjct: 329 QAVKPIALRFIRDLASYPPL----KGIPLFGIGGITTWQDALDFILLGCTALQVCTSVME 384
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQ--EAIQQRKAVRK 399
+GY ++ L E L +MK H+ +S+++ RG ++ +L R ++ I R+ +
Sbjct: 385 YGYRIIDHLKEGLSIYMKQHDIASLDELRGLALPNLVQPEQLDRERKLHCEIDSRRCIHC 444
Query: 400 G 400
G
Sbjct: 445 G 445
>gi|392425358|ref|YP_006466352.1| dihydroorotate dehydrogenase family protein [Desulfosporosinus
acidiphilus SJ4]
gi|391355321|gb|AFM41020.1| dihydroorotate dehydrogenase family protein [Desulfosporosinus
acidiphilus SJ4]
Length = 402
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 188/341 (55%), Gaps = 17/341 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL++ G Q+ NPFV+ P + +AF+ GW V KTVS+D+ V V P
Sbjct: 4 DLTVDFCGFQLENPFVLAPSPSTDKVDQLTQAFEAGWAGAVLKTVSVDSNVVRRVFPLVM 63
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R+ + IG +NI+LIS+ +E + + + LK L+P K +I SI+ K W
Sbjct: 64 RVEHLKD------FIGLQNIDLISEHSVEQIEENIRLLKRLFPTKAVIPSIIAN-RKEEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWIN-AKATVPVWAK 224
+ L R+ E G D +E + S PHG E +G+ + Q+ EE+ W+ A VPV K
Sbjct: 117 QMLAYRMAEAGADLLECSISFPHG-AEWGLGSKI-QEPSSTEEIVRWVKEAAGKVPVVVK 174
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
++ +DI A R G+EGV A+NT+ S++G+DL TL P P + G ST GG S A+
Sbjct: 175 LSAQDSDIIATATAVERGGAEGVCALNTLKSIIGVDLDTLIPYPNIAGLSTYGGLSGPAL 234
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL IA+ + + ++ GG+ T D AEF+LLGA+++Q+CT V+ G+
Sbjct: 235 KPIALRCTAEIAQKL-------NLDIAASGGITTWQDGAEFLLLGASSLQLCTAVLRFGF 287
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
G+++ L LK +M+ +F ++ D G S+ Y H+ L R
Sbjct: 288 GIIRELISGLKGWMEEKSFQNLTDVIGRSLPYLVGHSHLPR 328
>gi|383760816|ref|YP_005439799.1| putative dihydroorotate dehydrogenase family protein [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381368114|dbj|BAL84935.1| putative dihydroorotate dehydrogenase family protein [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 502
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 191/341 (56%), Gaps = 13/341 (3%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
E L + G+ + NPF++ S + Y + RAF+ GW KT+ A + +PR
Sbjct: 100 ERALQTEICGIPLENPFLLSSSVVASTYDMCARAFEAGWAGAAFKTIC--AFDIHEASPR 157
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
++ + SA G I+G++NIE +SD L ++ F+QLK YP K ++ASIM N
Sbjct: 158 FSAIH-----SADGSIMGFKNIEQLSDHSLPENMEIFRQLKKDYPQKFILASIMGR-NDR 211
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
W EL +E G DA+E+NFSCP+ M E +G+ +GQ L+E A++P+ A
Sbjct: 212 EWAELARLCQENGADALELNFSCPN-MMEDGLGSDIGQVPELVERFTAAARRGASIPLLA 270
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K+TPN+ + A A G++G++AINTI S+M ++L T P V+G S GGYS A
Sbjct: 271 KLTPNVAAMGPAAEAARNGGADGLAAINTIKSLMSVNLHTFVTSPAVKGQSAVGGYSGNA 330
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
V PIAL + + + K +SG+GGVET DA EF++LGA ++QV T VM +G
Sbjct: 331 VKPIALRFIAELGQNPKL----SGMHISGMGGVETWRDALEFMMLGAGSIQVTTAVMQYG 386
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELV 384
Y +++ L L ++ FS D G +++ + T+++
Sbjct: 387 YRIIEDLKAGLNYYLHEKGFSRAGDVVGLALDSVSETTDVL 427
>gi|419718517|ref|ZP_14245834.1| dihydropyrimidine dehydrogenase, B subunit [Lachnoanaerobaculum
saburreum F0468]
gi|383305352|gb|EIC96720.1| dihydropyrimidine dehydrogenase, B subunit [Lachnoanaerobaculum
saburreum F0468]
Length = 420
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 189/357 (52%), Gaps = 15/357 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G+ NPF + S P G+NY + +A GWG + KT+S+ P
Sbjct: 6 DLSINFLGVDCENPFFLSSSPVGSNYEMCAKALRAGWGGIFYKTISV-------FIPNEC 58
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R G++N+E+ SD+P E KQLK +P+K++++SIM N W
Sbjct: 59 SPRFDIASKEGTPWTGFKNMEMTSDKPNEVNFGFIKQLKKDFPNKVIVSSIMGA-NDDEW 117
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
L E+ G D IE NFSCP M MG+ VGQ+ L++ C ++ +P+ AKM
Sbjct: 118 AILAKESEKAGADMIECNFSCPQ-MTSSTMGSDVGQNPDLVKHYCEVASSSTKLPIIAKM 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+ ++ PAR AL G++G++AINT+ S+ +D+ P V G S GYS AV
Sbjct: 177 TPNLGNMEIPARAALEGGAKGIAAINTVKSITNLDINLRTGMPVVNGKSAISGYSGAAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL I+ +M K ++G+GG+ET D EF++LGA+ +QV T VM +GY
Sbjct: 237 PIAL---RFISDLMHDPIVSK-VPITGMGGIETWRDCLEFLMLGASNLQVTTAVMQYGYR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQ--QRKAVRKG 400
+V+ + + +M + ++D G+++ +L R + +Q + K V+ G
Sbjct: 293 IVEDMISGMSHYMNDYGIGKLQDIVGSAVGNIVGADDLDRSYKILVQIDKEKCVKCG 349
>gi|293446497|ref|ZP_06662919.1| yeiA protein [Escherichia coli B088]
gi|291323327|gb|EFE62755.1| yeiA protein [Escherichia coli B088]
Length = 335
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 155/247 (62%), Gaps = 6/247 (2%)
Query: 125 IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNF 184
+E I++ PLE L +QLK YPDK+LIASIM E N+ WEEL V+E G D IE NF
Sbjct: 1 MEQIAEHPLEENLAALRQLKEDYPDKVLIASIMGE-NEQQWEELARLVQEAGADMIECNF 59
Query: 185 SCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGS 244
SCP M MG+ VGQ L+E+ C + +T+P+ AKMTPNI D+ E A A R G+
Sbjct: 60 SCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGA 118
Query: 245 EGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304
+G++AINT+ S+ IDL P V G S+ GYS KAV PIAL + M++
Sbjct: 119 DGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIAL----RFIQQMRTHPE 174
Query: 305 DKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364
+D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L ++ F
Sbjct: 175 LRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFD 234
Query: 365 SIEDFRG 371
S+++ G
Sbjct: 235 SLQEMVG 241
>gi|195438144|ref|XP_002066997.1| GK24771 [Drosophila willistoni]
gi|194163082|gb|EDW77983.1| GK24771 [Drosophila willistoni]
Length = 1045
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 182/320 (56%), Gaps = 22/320 (6%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
E D+S+ VNGL+ NPF + S P T+ + +RAF++GWG V KTV LD +V NV+PR
Sbjct: 554 EVDISVEVNGLKYLNPFGLASAPSTTSAAMCRRAFEDGWGFAVTKTVVLDRDEVTNVSPR 613
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
R GS + NIEL+S++ + QLK +P +I SIM +Y +A
Sbjct: 614 IVRGSTHHQGS-------FMNIELVSEKKADYWFCAISQLKKDFPMHRIICSIMCDYREA 666
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
W EL G DA+E+N SCP+GM E+ +GQD +++ ++C W+ +P +
Sbjct: 667 DWVELATLAANCGSDALELNLSCPNGMAEK----GLGQDPKIVADICRWVRGAIKIPFYV 722
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTL-RPEPCV--EGYSTPGGYS 280
K+TPN+TDI E A+ A+ + GV+AINT+ S+M DL+ P P V E ++ GG S
Sbjct: 723 KLTPNVTDIVEIAKAAVDGKANGVTAINTVSSLM--DLRADGTPWPAVGAEQLTSYGGLS 780
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
+ P+AL + +IAK + ++ ++ G GGVE+G A +FI GA+ VQ+ + +
Sbjct: 781 GSVIRPLALRAISAIAKKL------QNIAILGTGGVESGETALQFIHAGASLVQISSAIQ 834
Query: 341 MHGYGLVKRLCEELKDFMKM 360
+ +++ C L+ + +
Sbjct: 835 NQNFAIIEDYCSSLRALLYL 854
>gi|374994040|ref|YP_004969539.1| dihydroorotate dehydrogenase [Desulfosporosinus orientis DSM 765]
gi|357212406|gb|AET67024.1| dihydroorotate dehydrogenase [Desulfosporosinus orientis DSM 765]
Length = 401
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 127/356 (35%), Positives = 190/356 (53%), Gaps = 17/356 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ G++ NPF++ P N + +AF+ GW V KTV++D+ V V P
Sbjct: 4 DLSVDYCGIKHENPFILAPSPSTDNLDFLIKAFEAGWAGAVLKTVAVDSRIVSRVFPMVT 63
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R+ A IG +NI+L+S+ +E + K + LK +P KI++ SIM ++K W
Sbjct: 64 RVEQEA------AFIGLQNIDLVSEHSVEIVEKNVRVLKERFPHKIVVPSIMA-FSKEDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWIN-AKATVPVWAK 224
+ L R + G D IE + PHG E + V + E++ GW+ A VPV K
Sbjct: 117 QALAKRFVDAGADIIECSIWHPHGT-EWTLCTQVNEPVGT-EKIAGWVKEAAGDVPVVIK 174
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
++ +DI A RSG++GVSAINTI S+ G++L TL P P + G ST GG S A+
Sbjct: 175 LSALDSDIIATAEAVERSGADGVSAINTIKSITGVNLDTLIPYPNIAGLSTYGGLSGPAL 234
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL IA+ + + ++ GG+ + D AEF+LLGA+T+Q+CT V+ G
Sbjct: 235 KPIALRCTAEIAQKV-------NLDIAASGGITSWKDGAEFLLLGASTLQICTSVLRFGL 287
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKG 400
G++ L + L +M+ F ++ DF G S+ Y H+ L R Q K V G
Sbjct: 288 GIIDELKQGLASWMEDKGFQNLTDFIGKSLPYLVEHSRLPRGIQVVSHINKEVCNG 343
>gi|290996101|ref|XP_002680621.1| dihydroorotate dehydrogenase family protein [Naegleria gruberi]
gi|284094242|gb|EFC47877.1| dihydroorotate dehydrogenase family protein [Naegleria gruberi]
Length = 1038
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/334 (35%), Positives = 178/334 (53%), Gaps = 19/334 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ V G++ NP+ + S PP T ++ RAFD GWG V KT LD V NV+PR
Sbjct: 534 DISVEVCGVKFENPYGLASAPPCTTADMIDRAFDAGWGFAVTKTFGLDKDLVTNVSPRII 593
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R N + NIELIS++ +LK +P KI+IASIM + + W
Sbjct: 594 RGSVTTNRGPHQS--AFMNIELISEKSATYWCTAITELKKKHPTKIVIASIMAAFKEEDW 651
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ L + E+ G D IE+N SCPHGM E+ +G A G D L+ +C W+ A +P +AK+
Sbjct: 652 KFLATKAEQAGADMIELNLSCPHGMGEKGLGLACGMDPYLVLNICKWVRAVTKIPFFAKL 711
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPE----PCV--EGYSTPGGY 279
TPN+TD+ + A A G++GV+A NT+ +M TL+P+ P V +T GG
Sbjct: 712 TPNVTDVLQIATAARDGGADGVTATNTVSGLM-----TLKPDATAWPAVGANKRTTYGGV 766
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIA+ V +AK N Y + GG ++ A +FI GA+ VQ+C+ V
Sbjct: 767 SGNAIRPIAMKAVSKVAK------NIPGYPILATGGCDSADVALQFIHAGASVVQICSSV 820
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ LK M ++ + + + G +
Sbjct: 821 QNQDFTVIEDYITGLKALMYINAHPAFKGWTGQT 854
>gi|417828533|ref|ZP_12475086.1| dihydroorotate dehydrogenase family protein [Shigella flexneri
J1713]
gi|335574909|gb|EGM61221.1| dihydroorotate dehydrogenase family protein [Shigella flexneri
J1713]
Length = 335
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/247 (45%), Positives = 155/247 (62%), Gaps = 6/247 (2%)
Query: 125 IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNF 184
+E I++ PLE L ++LK YPDK+LIASIM E N+ WEEL V+E G D IE NF
Sbjct: 1 MEQIAEHPLEENLTALRRLKEDYPDKVLIASIMGE-NEQQWEELARLVQEAGADMIECNF 59
Query: 185 SCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGS 244
SCP M MG+ VGQ L+E+ C + +T+P+ AKMTPNI D+ E A A R G+
Sbjct: 60 SCPQ-MTSHAMGSDVGQSSELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGA 118
Query: 245 EGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304
+G++AINT+ S+ IDL P V G S+ GYS KAV PIAL + M++
Sbjct: 119 DGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIAL----RFIQQMRTHPE 174
Query: 305 DKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364
+D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L ++ F
Sbjct: 175 LRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFD 234
Query: 365 SIEDFRG 371
S+++ G
Sbjct: 235 SLQEMVG 241
>gi|402312550|ref|ZP_10831474.1| hypothetical protein HMPREF1140_1672 [Lachnospiraceae bacterium
ICM7]
gi|400369008|gb|EJP22011.1| hypothetical protein HMPREF1140_1672 [Lachnospiraceae bacterium
ICM7]
Length = 420
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 119/350 (34%), Positives = 186/350 (53%), Gaps = 13/350 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G+ NPF + S P G+NY + +A GWG + KT+S+ P
Sbjct: 6 DLSINFLGVDCENPFFLSSSPVGSNYEMCAKALRAGWGGIFYKTISV-------FIPNEC 58
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R G++N+E+ SD+P E + +QLK +P+K++++SIM + W
Sbjct: 59 SPRFDIASKEGTPWTGFKNMEMTSDKPNEVNFEFIRQLKKDFPNKVIVSSIMGASDDE-W 117
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
L E+ G D IE NFSCP M MG+ VGQ+ L++ C +A +P+ AKM
Sbjct: 118 AVLAKESEKAGADMIECNFSCPQ-MTSSTMGSDVGQNPDLVKHYCEVASASTKLPIIAKM 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+ ++ PAR A+ G++G++AINT+ S+ +D+ P V G S GYS AV
Sbjct: 177 TPNLGNMEIPARAAIEGGAKGIAAINTVKSITNLDINLRTGMPVVNGKSAISGYSGAAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL I+ +M K ++G+GG+ET D EF++LGA+ +QV T VM +GY
Sbjct: 237 PIAL---RFISDLMHDPIVSK-VPITGMGGIETWRDCLEFLMLGASNLQVTTAVMQYGYR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRK 395
+V+ + + +M + + ++D G ++ +L R + +Q K
Sbjct: 293 IVEDMISGISHYMNDYGINKLQDIVGTAVGNIVGADDLDRSYKILVQIDK 342
>gi|444970119|ref|ZP_21287495.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1793]
gi|444579672|gb|ELV55649.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli 99.1793]
Length = 335
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 113/247 (45%), Positives = 155/247 (62%), Gaps = 6/247 (2%)
Query: 125 IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNF 184
+E I++ PLE L ++LK YPDK+LIASIM E N+ WEEL V+E G D IE NF
Sbjct: 1 MEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQWEELARLVQEAGADMIECNF 59
Query: 185 SCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGS 244
SCP M MG+ VGQ L+E+ C + +T+P+ AKMTPNI D+ E A A R G+
Sbjct: 60 SCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGA 118
Query: 245 EGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304
+G++AINT+ S+ IDL P V G S+ GYS KAV PIAL + M++
Sbjct: 119 DGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIAL----RFIQQMRTHPE 174
Query: 305 DKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364
+D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L ++ F
Sbjct: 175 LRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFD 234
Query: 365 SIEDFRG 371
S+++ G
Sbjct: 235 SLQEMVG 241
>gi|331003589|ref|ZP_08327086.1| hypothetical protein HMPREF0491_01948 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412430|gb|EGG91821.1| hypothetical protein HMPREF0491_01948 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 420
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/357 (34%), Positives = 189/357 (52%), Gaps = 15/357 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G+ NPF + S P G+NY + +A GWG + KT+S+ P
Sbjct: 6 DLSINFLGVDCENPFFLSSSPVGSNYEMCAKALRAGWGGIFYKTISV-------FIPNEC 58
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R G++N+E+ SD+P E KQLK +P+K++++SIM + W
Sbjct: 59 SPRFDIASKEGTPWTGFKNMEMTSDKPNEVNFGFIKQLKKDFPNKVIVSSIMGASDDE-W 117
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
L E+ G D IE NFSCP M MG+ VGQ+ L++ C ++ +P+ AKM
Sbjct: 118 AILAKESEKAGADMIECNFSCPQ-MTSSTMGSDVGQNPDLVKHYCEVASSNTKLPIIAKM 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+ ++ PAR AL G++G++AINT+ S+ +D+ P V G S GYS AV
Sbjct: 177 TPNLGNMEIPARAALEGGAKGIAAINTVKSITNLDINLRTGMPVVNGKSAISGYSGAAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL I+ +M K ++G+GG+ET D EF++LGA+ +QV T VM +GY
Sbjct: 237 PIAL---RFISDLMHDPVVSK-VPITGMGGIETWRDCLEFLMLGASNLQVTTAVMQYGYR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQ--EAIQQRKAVRKG 400
+V+ + + +M + + ++D G+++ +L R + I + K V+ G
Sbjct: 293 IVEDMISGMSHYMNDYGINKLQDIVGSAVGNIVGADDLDRSYKILVRIDKEKCVKCG 349
>gi|62871418|gb|AAY18593.1| putative dihydropyrimidinase dehydrogenase [Bacillus sp. TS-23]
Length = 349
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 150/249 (60%), Gaps = 5/249 (2%)
Query: 130 DRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHG 189
DRPLE LKE + K +P+ +IAS+M E + W E++ RV++ G+D E+NF CPHG
Sbjct: 1 DRPLEVNLKEIYETKKRFPNHAIIASLMVEPKREKWHEIVKRVQDVGVDGFELNFGCPHG 60
Query: 190 MPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSA 249
M ER MG+A GQ L+E+ W+ A PV K+TPNITDIT A A++ G++ +S
Sbjct: 61 MAERGMGSASGQVPELVEKQTYWVKEVAEKPVIVKLTPNITDITATAEAAVQGGADAISM 120
Query: 250 INTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYS 309
INTI S+MG+DL T P V G GGY AV PIAL V A+ + +
Sbjct: 121 INTINSLMGVDLDTWHTIPHVAGKGAHGGYCGPAVKPIALNMVAECARHPRI-----NVP 175
Query: 310 LSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDF 369
+SG+GGV + +A EF+L+GA VQVCT VM HG+ +++ + E L ++ +S+ D
Sbjct: 176 ISGMGGVSSWKEAVEFMLMGATGVQVCTAVMHHGFRIIEDMVEGLHLYLDSKGIASVMDL 235
Query: 370 RGASIEYFT 378
G ++ ++
Sbjct: 236 VGKAVHRYS 244
>gi|374579942|ref|ZP_09653036.1| dihydroorotate dehydrogenase family protein [Desulfosporosinus
youngiae DSM 17734]
gi|374416024|gb|EHQ88459.1| dihydroorotate dehydrogenase family protein [Desulfosporosinus
youngiae DSM 17734]
Length = 403
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/382 (35%), Positives = 198/382 (51%), Gaps = 35/382 (9%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ G++ NPF++ P N ++ +AF+ GW V KTV+ ++ V V P
Sbjct: 4 DLSVDFCGIKHENPFILAPSPSTDNLELLIQAFESGWAGAVLKTVAFNSRIVSRVFPMVT 63
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R+ A IG +NI+L+S+ +ET+ + + LK +P+KI+I SIM + K W
Sbjct: 64 RVEQEA------AFIGLQNIDLVSEHSVETIEQNVRILKERFPNKIVIPSIMA-FTKDDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPER---KMGAAVGQDCRLLEEVCGWINAKA-TVPV 221
+ L R G D IE + PHG K+ VG E++ W+ A VPV
Sbjct: 117 QTLTKRFIAAGADIIECSIWHPHGTEWTLCTKVEEPVGT-----EQIASWVKEAAEDVPV 171
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
K++ +DI A RSG++GVSAINTI S+ G++L TL P P + G ST GG S
Sbjct: 172 VIKLSALDSDIIATAEAVERSGADGVSAINTIKSITGVNLDTLIPYPNIAGLSTYGGLSG 231
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
A+ PIAL IA+ + D ++ GG+ T D+AEF+LLGA+T+Q+CT V+
Sbjct: 232 PALKPIALRCTAEIAQKV-------DLDIAASGGITTWQDSAEFLLLGASTLQICTAVLR 284
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRK------ 395
G G+++ L + L+ +M F S+ D G S+ Y H+ L R Q +K
Sbjct: 285 FGLGIIEDLKQGLESWMVEKGFQSLTDVIGKSLPYLVEHSWLPRGIQVVAHIQKEICDTC 344
Query: 396 -----AVRKGLQSDKDWTGDGF 412
A R G + WT +GF
Sbjct: 345 GACYTACRSGGHNAIIWT-NGF 365
>gi|62319394|dbj|BAD94713.1| dihydroorotate dehydrogenase like protein [Arabidopsis thaliana]
Length = 116
Score = 202 bits (515), Expect = 2e-49, Method: Composition-based stats.
Identities = 93/116 (80%), Positives = 106/116 (91%)
Query: 307 DYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSI 366
D SLSGIGGVETG DAAEFILLG+NTVQVCTGVMMHGYG VK LC ELKDFMK HNFS+I
Sbjct: 1 DRSLSGIGGVETGYDAAEFILLGSNTVQVCTGVMMHGYGHVKTLCAELKDFMKQHNFSTI 60
Query: 367 EDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLSMVSN 422
E+FRG S++YFTTHT+LV+ Q+EA++QRKA ++GL+SDKDWTGDGFVKET SMVSN
Sbjct: 61 EEFRGHSLQYFTTHTDLVKRQKEAVEQRKAEKRGLKSDKDWTGDGFVKETESMVSN 116
>gi|404483014|ref|ZP_11018239.1| dihydroorotate dehydrogenase [Clostridiales bacterium OBRC5-5]
gi|404344104|gb|EJZ70463.1| dihydroorotate dehydrogenase [Clostridiales bacterium OBRC5-5]
Length = 420
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/350 (33%), Positives = 186/350 (53%), Gaps = 13/350 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G+ NPF + S P G+NY + +A GWG + KT+S+ P
Sbjct: 6 DLSINFLGVDCENPFFLSSSPVGSNYEMCAKALRAGWGGIFYKTISV-------FIPNEC 58
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
R G++N+E+ SD+P E + +QLK +P+K++++SIM + W
Sbjct: 59 SPRFDIASKEGTPWTGFKNMEMTSDKPNEVNFEFIRQLKKDFPNKVIVSSIMGATDDE-W 117
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
L E+ G D IE NFSCP M MG+ VGQ+ L++ C ++ +P+ AKM
Sbjct: 118 AILAKESEKAGADMIECNFSCPQ-MTSSTMGSDVGQNPDLVKHYCEVASSSTKLPIIAKM 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+ ++ PAR A+ G++G++AINT+ S+ +D+ P V G S GYS AV
Sbjct: 177 TPNLGNMEIPARAAIEGGAKGIAAINTVKSITNLDINLRTGMPVVNGKSAISGYSGAAVK 236
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIAL I+ +M K ++G+GG+ET D EF++LGA+ +QV T VM +GY
Sbjct: 237 PIAL---RFISDLMHDPIVSK-VPITGMGGIETWRDCLEFLMLGASNLQVTTAVMQYGYR 292
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRK 395
+V+ + + +M + + ++D G ++ +L R + +Q K
Sbjct: 293 IVEDMISGMSHYMNDYGINKLQDIVGTAVGNIVGADDLDRSYKILVQIDK 342
>gi|419376051|ref|ZP_13917076.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC14B]
gi|378220138|gb|EHX80404.1| dihydroorotase dehydrogenase family protein [Escherichia coli
DEC14B]
Length = 232
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/235 (47%), Positives = 149/235 (63%), Gaps = 6/235 (2%)
Query: 125 IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNF 184
+E I++ PLE L +QLK YPDK+LIASIM E N+ WEEL V+E G D IE NF
Sbjct: 1 MEQIAEHPLEENLAALRQLKEDYPDKVLIASIMGE-NEQQWEELARLVQEAGADMIECNF 59
Query: 185 SCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGS 244
SCP M MG+ VGQ L+E+ C + +T+P+ AKMTPNI D+ E A A R G+
Sbjct: 60 SCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGA 118
Query: 245 EGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304
+G++AINT+ S+ IDL P V G S+ GYS KAV PIAL + M++
Sbjct: 119 DGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIAL----RFIQQMRTHPE 174
Query: 305 DKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMK 359
+D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L + +
Sbjct: 175 LRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYRR 229
>gi|437505344|ref|ZP_20775398.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|435235401|gb|ELO16204.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
Length = 332
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 155/247 (62%), Gaps = 6/247 (2%)
Query: 125 IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNF 184
+E I++ PLE L ++LK YPDK+LIASIM E N+ W+EL VEE G D IE NF
Sbjct: 1 MEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQWQELARLVEEAGADMIECNF 59
Query: 185 SCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGS 244
SCP M MG+ VGQ L+E+ C + +++P+ AKMTPNI D+ E A A R G+
Sbjct: 60 SCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGA 118
Query: 245 EGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304
+G++ INT+ S+ IDL P V G S+ GYS KAV PIAL + + M E
Sbjct: 119 DGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVKPIALRFIQQL--RMHPEL- 175
Query: 305 DKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364
+D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L ++ F+
Sbjct: 176 -RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFA 234
Query: 365 SIEDFRG 371
S+++ G
Sbjct: 235 SLQEMIG 241
>gi|417466722|ref|ZP_12165071.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. S5-403]
gi|353629888|gb|EHC77595.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. S5-403]
Length = 335
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 155/247 (62%), Gaps = 6/247 (2%)
Query: 125 IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNF 184
+E I++ PLE L ++LK YPDK+LIASIM E N+ W+EL VEE G D IE NF
Sbjct: 1 MEQIAEHPLEENLDAIRRLKQDYPDKVLIASIMGE-NEQQWQELARLVEEAGADMIECNF 59
Query: 185 SCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGS 244
SCP M MG+ VGQ L+E+ C + +++P+ AKMTPNI D+ E A A R G+
Sbjct: 60 SCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGA 118
Query: 245 EGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304
+G++ INT+ S+ IDL P V G S+ GYS KAV PIAL + + M E
Sbjct: 119 DGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVKPIALRFIQQL--RMHPEL- 175
Query: 305 DKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364
+D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L ++ F+
Sbjct: 176 -RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFA 234
Query: 365 SIEDFRG 371
S+++ G
Sbjct: 235 SLQEMIG 241
>gi|417476370|ref|ZP_12170907.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|421409046|ref|ZP_15858841.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|437583596|ref|ZP_20792590.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 39-2]
gi|437840315|ref|ZP_20846414.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|438129673|ref|ZP_20873373.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Pullorum str. ATCC 9120]
gi|445128470|ref|ZP_21380263.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
gi|445154462|ref|ZP_21391789.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Dublin str. HWS51]
gi|445344327|ref|ZP_21417599.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13-1]
gi|353641083|gb|EHC85901.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|396025977|gb|EJI34750.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|434941809|gb|ELL48196.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Pullorum str. ATCC 9120]
gi|435263494|gb|ELO42541.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 39-2]
gi|435297100|gb|ELO73396.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|444850707|gb|ELX75804.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Dublin str. HWS51]
gi|444854932|gb|ELX79987.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
gi|444880499|gb|ELY04574.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13-1]
Length = 335
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 155/247 (62%), Gaps = 6/247 (2%)
Query: 125 IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNF 184
+E I++ PLE L ++LK YPDK+LIASIM E N+ W+EL VEE G D IE NF
Sbjct: 1 MEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQWQELARLVEEAGADMIECNF 59
Query: 185 SCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGS 244
SCP M MG+ VGQ L+E+ C + +++P+ AKMTPNI D+ E A A R G+
Sbjct: 60 SCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGA 118
Query: 245 EGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304
+G++ INT+ S+ IDL P V G S+ GYS KAV PIAL + + M E
Sbjct: 119 DGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVKPIALRFIQQL--RMHPEL- 175
Query: 305 DKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364
+D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L ++ F+
Sbjct: 176 -RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFA 234
Query: 365 SIEDFRG 371
S+++ G
Sbjct: 235 SLQEMIG 241
>gi|213646116|ref|ZP_03376169.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|378958818|ref|YP_005216304.1| hypothetical protein STBHUCCB_7150, partial [Salmonella enterica
subsp. enterica serovar Typhi str. P-stx-12]
gi|374352690|gb|AEZ44451.1| hypothetical protein STBHUCCB_7150 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 335
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 155/247 (62%), Gaps = 6/247 (2%)
Query: 125 IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNF 184
+E I++ PLE L ++LK YPDK+LIASIM E N+ W+EL VEE G D IE NF
Sbjct: 1 MEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQWQELARLVEEAGADMIECNF 59
Query: 185 SCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGS 244
SCP M MG+ VGQ L+E+ C + +++P+ AKMTPNI D+ E A A R G+
Sbjct: 60 SCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGA 118
Query: 245 EGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304
+G++ INT+ S+ IDL P V G S+ GYS KAV PIAL + + M E
Sbjct: 119 DGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVKPIALRFIQQL--RMHPEL- 175
Query: 305 DKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364
+D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L ++ F+
Sbjct: 176 -RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFA 234
Query: 365 SIEDFRG 371
S+++ G
Sbjct: 235 SLQEMIG 241
>gi|437742065|ref|ZP_20833322.1| dihydropyrimidine dehydrogenase subunit B, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
76-2651]
gi|435313146|gb|ELO86889.1| dihydropyrimidine dehydrogenase subunit B, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str.
76-2651]
Length = 319
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/247 (45%), Positives = 155/247 (62%), Gaps = 6/247 (2%)
Query: 125 IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNF 184
+E I++ PLE L ++LK YPDK+LIASIM E N+ W+EL VEE G D IE NF
Sbjct: 1 MEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQWQELARLVEEAGADMIECNF 59
Query: 185 SCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGS 244
SCP M MG+ VGQ L+E+ C + +++P+ AKMTPNI D+ E A A R G+
Sbjct: 60 SCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGA 118
Query: 245 EGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN 304
+G++ INT+ S+ IDL P V G S+ GYS KAV PIAL + + M E
Sbjct: 119 DGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVKPIALRFIQQL--RMHPEL- 175
Query: 305 DKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS 364
+D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L ++ F+
Sbjct: 176 -RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFA 234
Query: 365 SIEDFRG 371
S+++ G
Sbjct: 235 SLQEMIG 241
>gi|424521018|ref|ZP_17965161.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW14301]
gi|390846269|gb|EIP09873.1| NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
[Escherichia coli TW14301]
Length = 236
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/239 (46%), Positives = 144/239 (60%), Gaps = 9/239 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSIT G++ PNPF + S P G Y + +A+D GWG VV KT+ A V+PR+
Sbjct: 5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
EEL V+E G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKM
Sbjct: 117 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
TPNI D+ E A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV
Sbjct: 176 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAV 234
>gi|398922546|ref|ZP_10660338.1| dihydroorotate dehydrogenase, partial [Pseudomonas sp. GM49]
gi|398162629|gb|EJM50817.1| dihydroorotate dehydrogenase, partial [Pseudomonas sp. GM49]
Length = 237
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/241 (46%), Positives = 149/241 (61%), Gaps = 6/241 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RAF+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ A +++G+ NIELI+DR LE L+E Q+K +PD+ LI S+M + +W
Sbjct: 62 -----AHFGANREVLGFNNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ ++ VE TG D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+
Sbjct: 117 KHILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKL 176
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNITDI AR A R G++ VS INTI S+ ++L+ + P V ST GGY AV
Sbjct: 177 TPNITDIRVAARAAHRGGADAVSLINTINSITSVNLERMVANPMVGSQSTHGGYCGSAVK 236
Query: 286 P 286
P
Sbjct: 237 P 237
>gi|220702725|gb|ACL81161.1| senescence associate dehydrogenase, partial [Mirabilis jalapa]
Length = 100
Score = 195 bits (495), Expect = 4e-47, Method: Composition-based stats.
Identities = 87/100 (87%), Positives = 97/100 (97%)
Query: 323 AEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTE 382
AEFILLGA+TVQVCTGVMMHGYGLVK+LC EL+DFM+MHNFSSIEDFRGAS++YFTTHTE
Sbjct: 1 AEFILLGAHTVQVCTGVMMHGYGLVKKLCSELQDFMRMHNFSSIEDFRGASLQYFTTHTE 60
Query: 383 LVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLSMVSN 422
LVRMQQEAI+QRKA+RKGL SDKDWTGDGFV+E+ SMVSN
Sbjct: 61 LVRMQQEAIEQRKALRKGLSSDKDWTGDGFVQESESMVSN 100
>gi|355745468|gb|EHH50093.1| hypothetical protein EGM_00862, partial [Macaca fascicularis]
Length = 762
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 148/250 (59%), Gaps = 12/250 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 519 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 578
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 579 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 632
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL + E++G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 633 NKNDWMELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 692
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ T P + +T GG
Sbjct: 693 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKSDGTPWPAVGIAKRTTYGGV 752
Query: 280 SCKAVHPIAL 289
S + +AL
Sbjct: 753 SGRCCPLLAL 762
>gi|402571829|ref|YP_006621172.1| dihydroorotate dehydrogenase [Desulfosporosinus meridiei DSM 13257]
gi|402253026|gb|AFQ43301.1| dihydroorotate dehydrogenase [Desulfosporosinus meridiei DSM 13257]
Length = 401
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 188/351 (53%), Gaps = 23/351 (6%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ G++ +PF++ P + + +AF+ GW V KTV++D+ V V P
Sbjct: 4 DLSVMYCGIKHDSPFILAPSPTTDHVDRLIQAFEAGWAGAVLKTVAVDSRIVSRVFPMVT 63
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L+ + IG +NI+L+S+ ++ + + K LK +P K+++ SIM + K W
Sbjct: 64 SLKR------EKAFIGLQNIDLVSEHSVDIVEQNVKVLKKKFPHKVVVPSIMA-FTKEDW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPER---KMGAAVGQDCRLLEEVCGWINAKA-TVPV 221
+ L R + G D IE + PHG K+ VG E++ GW+ A VP+
Sbjct: 117 QSLTQRFVKAGADIIECSIWHPHGTEWTLCTKVDEPVGT-----EQIAGWVKEVAGDVPI 171
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
K++ + +DI A RSG+ GVSAINTI S+ G++L+TL P P + G ST GG S
Sbjct: 172 VIKLSASDSDIIATAAAVERSGANGVSAINTIKSITGVNLETLIPYPNIAGVSTYGGLSG 231
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
A+ PIAL IA+ + + ++ GG+ T D AEF+LLGA+T+Q+CT V+
Sbjct: 232 PALKPIALRCTAEIAQKV-------NLDIASSGGITTWQDCAEFLLLGASTLQLCTAVLR 284
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQ 392
G G+++ L + L+ +M F ++ D G S+ Y H+ L R Q Q
Sbjct: 285 FGIGIIEELKQGLEGWMMEKGFQNLTDVIGKSLPYLVEHSRLPRGIQVVSQ 335
>gi|145500820|ref|XP_001436393.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403532|emb|CAK68996.1| unnamed protein product [Paramecium tetraurelia]
Length = 997
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 173/322 (53%), Gaps = 15/322 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI + G+ NPF + S PP T+Y ++KRAF EGWG V KT LD + NV+PR
Sbjct: 544 DLSINILGVNFLNPFGLASAPPTTSYPMIKRAFQEGWGFAVVKTFVLDKDAITNVSPRIY 603
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ + Q G+ NIELIS++ + L+ K +K +P+ +LI SIM ++ + W
Sbjct: 604 K----STTDPLKQDPGYANIELISEKSAKYWLEGSKAIKKEFPNHVLIGSIMCQHIEQDW 659
Query: 166 EELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
EL + + G D +E+N SCPHGM E MG A G++ +++++C W+ ++ +PV K
Sbjct: 660 RELTRKCKNEGQFDMLELNLSCPHGMTELGMGRACGENPAIVKDICQWVTSEIDIPVIVK 719
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGID-LKTLRPEPCVEGYSTPGGYSCKA 283
+TPN D + A+ A G++ V+ NT ++M D L T P E T GG
Sbjct: 720 ITPNYPDSADIAQAAKEGGAKAVTLTNTFPTLMDPDPLGTPWPAVGEENNVTYGGGCGSM 779
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ PIAL K +AK + D ++ G GG+ G A F+ GA+ Q+C+ V
Sbjct: 780 LRPIALRKTSEVAKAI------PDIAIFGSGGIIQGDHALSFLRYGASAFQICSAVQDQD 833
Query: 344 YGLVKRLCEELKDFMKMHNFSS 365
+ V +LK + H ++S
Sbjct: 834 FATV---LYDLKTSFQAHLYAS 852
>gi|218670690|ref|ZP_03520361.1| dihydropyrimidine dehydrogenase [Rhizobium etli GR56]
Length = 214
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 134/217 (61%), Gaps = 6/217 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT-PRY 104
DL G++ PNPF + S PP ++RAF GWG VV KT+ + V+NV PRY
Sbjct: 3 DLRNNFVGIKSPNPFWLASAPPTDKAYNVERAFKAGWGGVVWKTLGEEGPPVVNVNGPRY 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
GA A +++G NIELI+DR L T L+E KQ+K +PD+ LIASIM + A
Sbjct: 63 -----GAIWGADRRLLGLNNIELITDRDLYTNLREMKQVKMNWPDRALIASIMVPCEEQA 117
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W+ ++ VEETG D IE+NF CPHGM ER MG+AVGQ +E V W +PV K
Sbjct: 118 WKSILPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPEYIEMVVRWCKQYTRMPVITK 177
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDL 261
+TPNITDI PAR A G++ VS INTI S++ +DL
Sbjct: 178 LTPNITDIRRPARAAKAGGTDAVSLINTINSIVSVDL 214
>gi|383787884|ref|YP_005472452.1| dihydropyrimidine dehydrogenase [Caldisericum exile AZM16c01]
gi|381363520|dbj|BAL80349.1| dihydropyrimidine dehydrogenase [Caldisericum exile AZM16c01]
Length = 411
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 188/358 (52%), Gaps = 15/358 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+SI G+ + +PF++ + PP + +R +EGW V+ KT S++ V P +
Sbjct: 6 DISIDFLGIHLDSPFILSAAPPTDELEMAERGLEEGWAGVILKTTSVEGNPVDLKNPMMS 65
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
G +++G NI+LIS ++ + + K LK +P+K++ ASIM +K W
Sbjct: 66 SF-----GPMSRKVVGLGNIDLISHHHIDVVEERVKYLKKKFPNKMIAASIMGA-SKEDW 119
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAK 224
+ L+ R+++ +D IE +FSCP G + G + Q E+V W+ A T PV K
Sbjct: 120 QTLVWRLKKAQVDLIECSFSCPQGSMGEEPGKMLAQSIEATEKVTRWVKEAADTTPVLIK 179
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TP +TDI E A+ R G++G++A NTI S+ G+D+ T P P + G G S A+
Sbjct: 180 ITPQVTDIVEVAKAVKRGGADGITASNTIPSLTGVDIYTFEPYPTLFGEGAYSGLSGPAI 239
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PI L + IA+ + D +SG GG DA EF+ +GA+ VQ CT M +G+
Sbjct: 240 KPITLRTIAEIAR-------NVDIVISGNGGAFNWRDAVEFMAVGASNVQFCTLPMHYGF 292
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEA-IQQRKAVRKGL 401
++ L L+ ++K F+S + G +++ +LV+ + + I K + GL
Sbjct: 293 RTIRDLRSGLEHYLKEMGFASPMEIIGRALKNIKNQEDLVKPETRSEINYDKCIGCGL 350
>gi|84686032|ref|ZP_01013928.1| Dihydroorotate dehydrogenase [Maritimibacter alkaliphilus HTCC2654]
gi|84666125|gb|EAQ12599.1| Dihydroorotate dehydrogenase [Rhodobacterales bacterium HTCC2654]
Length = 338
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 144/251 (57%), Gaps = 6/251 (2%)
Query: 152 LIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211
++ S+M ++ AW +++DRV ETG D +E+NF CPHGM ER MG+AVGQ + ++
Sbjct: 1 MVVSLMVPLDEDAWRKILDRVGETGADGVELNFGCPHGMAERGMGSAVGQVPEYVGQITQ 60
Query: 212 WINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVE 271
W+ + +P K+TPNITDI +PA A + G++ VS INTI S+ ++L + PEP ++
Sbjct: 61 WVKKHSDLPCIVKLTPNITDIRQPALAAKQGGADAVSMINTINSITSVNLDAMCPEPMID 120
Query: 272 GYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 331
G T GGY AV PIA+ V +A+ K+ +S IGG+ T DAAEF+ LGA
Sbjct: 121 GLGTHGGYCGPAVKPIAMNMVAEVARWEKT----AGIPISAIGGISTWRDAAEFMALGAG 176
Query: 332 TVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFT--THTELVRMQQE 389
QVCT M +G+ +VK +C + +M ++ DF G + T H L + +
Sbjct: 177 NAQVCTAAMTYGFRIVKEMCSGMSQWMDEKGYTKTSDFIGMATPRVTDWQHLNLDYVTKA 236
Query: 390 AIQQRKAVRKG 400
I Q + G
Sbjct: 237 EIDQDLCISCG 247
>gi|429728458|ref|ZP_19263181.1| putative dihydropyrimidine dehydrogenase [Peptostreptococcus
anaerobius VPI 4330]
gi|429149687|gb|EKX92658.1| putative dihydropyrimidine dehydrogenase [Peptostreptococcus
anaerobius VPI 4330]
Length = 285
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 164/291 (56%), Gaps = 15/291 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P +NY ++K+AF+ GW V KT+ + +PR+
Sbjct: 6 DLSIDFLGVKCENPFFLSSSPVCSNYDMIKKAFEAGWAGVYYKTIGIFIPD--ECSPRFD 63
Query: 106 RLRAGANGSAKGQI-IGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
R +G + G++N+E ISD+PLE L+ +LK +P K+L SIM +
Sbjct: 64 ITRK------EGAVWTGFKNMEQISDKPLEKNLEYISRLKKDFPTKVLAVSIMGS-TEEE 116
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
W L +V E G D IE NFSCP M MG+ VGQ+ L+E+ + +PV AK
Sbjct: 117 WSILAKKVTEAGADLIECNFSCPQ-MTSHAMGSDVGQNPELVEKYTRAVVESTHLPVIAK 175
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
MTPNI ++ PA A++ G++G++AINTI ++ ID++ + P V S+ GYS AV
Sbjct: 176 MTPNIGNMEIPAMAAMKGGAKGIAAINTIKAITNIDVENMTAMPVVNAKSSISGYSGAAV 235
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQV 335
PIAL + MK KD ++G+GG+ET DA EF+L GA ++
Sbjct: 236 KPIALRFITQ----MKQHEELKDVPITGMGGIETWSDALEFLLCGATIFRL 282
>gi|372280999|ref|ZP_09517035.1| dihydropyrimidine dehydrogenase subunit B [Oceanicola sp. S124]
Length = 372
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 189/358 (52%), Gaps = 29/358 (8%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVI----NVTP 102
L+ + L NPFV+ S PP + + +AF+ GWG VV KT+ L + + +
Sbjct: 5 LATSFTSLDFVNPFVLASAPPTESKRKILKAFEAGWGGVVTKTIGLHPVENVAGPKTIYQ 64
Query: 103 RYARLRAGANGSAKGQIIG---WENIELISDRPLETMLKEFKQLKALYPDKILIASIM-- 157
R + + + + + + W N ELISD+PLE L + +++K+ YPD++LI SIM
Sbjct: 65 RASEEKPYVSRTKRPDTVSHSSW-NWELISDQPLELWLPDLEEIKSTYPDRMLIGSIMAG 123
Query: 158 ----EEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWI 213
EE A W++L + G DA+E+N SCPH M + MGA + D ++ + +
Sbjct: 124 AGGAEEM--ANWQKLARACVDAGCDALELNMSCPH-MDRKDMGAHIANDEDIIRGILKAV 180
Query: 214 NAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGY 273
VP+W K+TP + + + A A +G+ +S NT S+ +D +T++ E V+GY
Sbjct: 181 TEAVDVPIWVKLTPATSTLVDAAGAAYAAGASAISLCNTFPSLPLMDPETMKFEVEVDGY 240
Query: 274 STPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTV 333
T GG A+ AL +V I++ D ++SGIGG++ +A FI+ GA +
Sbjct: 241 VTSGGQGGLAILNQALQRVSDISRAY------PDQAISGIGGIKGFHEAFNFIVHGAGNL 294
Query: 334 QVCTGVMMH------GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
QVCT M G L++ LC +L +++ SSIEDFRG + E H+++ R
Sbjct: 295 QVCTAAMEEKGSGGVGVKLIQELCSDLGAYLERKGMSSIEDFRGIARERIVEHSKIRR 352
>gi|416362495|ref|ZP_11682599.1| dihydropyrimidine dehydrogenase subunit B, partial [Clostridium
botulinum C str. Stockholm]
gi|338194261|gb|EGO86756.1| dihydropyrimidine dehydrogenase subunit B [Clostridium botulinum C
str. Stockholm]
Length = 253
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 143/244 (58%), Gaps = 9/244 (3%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ NPF + S P G Y + +A + GWG +V KT+ + K V+PR+
Sbjct: 5 DLSIEFCGVKCENPFFLSSSPVGNCYEMCAKALETGWGGIVFKTIGFFSPK--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L+ +G++N+E I++ LE L+ ++LK YP K+L+ASIM + N++ W
Sbjct: 63 NLKKECT-----PFLGFKNMEQIAEHSLEENLESMRRLKENYPSKVLVASIMGQ-NESEW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+L V E G D IE NFSCP M MG+ VGQ+ L+++ C + +P+ AKM
Sbjct: 117 TKLAKLVTEIGADIIECNFSCPQ-MTSHDMGSDVGQNPELVKKYCQAVRKGTNLPILAKM 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPNI ++T PA ++ G+ G+S INTI + GIDL + P + G S+ GYS KAV
Sbjct: 176 TPNIGNMTIPAIASIEGGATGISTINTIKCISGIDLDNMVGLPVINGKSSVSGYSGKAVK 235
Query: 286 PIAL 289
PIAL
Sbjct: 236 PIAL 239
>gi|340500564|gb|EGR27432.1| hypothetical protein IMG5_196150 [Ichthyophthirius multifiliis]
Length = 1020
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 162/302 (53%), Gaps = 25/302 (8%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S V G++M NPF + S PP T+Y ++ R+FD G+ V KT+ LD V N++PR
Sbjct: 560 DISTEVCGVKMNNPFGLASAPPTTSYPMISRSFDIGYDFAVIKTLVLDKDTVSNISPRIY 619
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+L + + NIEL+S++ LE +K Q+K YP+KILI S+M N+ W
Sbjct: 620 KLTSDPLKLEPS----FGNIELVSEKSLEYWVKGAIQIKKDYPNKILIGSLMAGNNEQDW 675
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+++++ +E D IE+N SCPHGM E+ MG A G+D ++ ++ W+ +K VP+ K+
Sbjct: 676 YDIVEKTKEAPFDMIELNLSCPHGMNEKGMGRACGEDPDVVRQITKWVTSKTKVPIIIKI 735
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEP--------CVEGYSTPG 277
TPN A+ A G++ V+ NT+ + + P P V+ TPG
Sbjct: 736 TPNYGQAELLAQAAYEGGAKAVTLTNTMPGL-------IDPYPDGEFSNGVGVKKQVTPG 788
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
G + + P AL K + +AK + + G GG+ +G A +I GA +Q+C+
Sbjct: 789 GSTGSILRPFALRKCVDVAKYVPQ------IEIFGSGGIISGDHALSYIQYGAKALQICS 842
Query: 338 GV 339
V
Sbjct: 843 AV 844
>gi|118377270|ref|XP_001021815.1| Dihydroorotate dehydrogenase family protein [Tetrahymena
thermophila]
gi|89303582|gb|EAS01570.1| Dihydroorotate dehydrogenase family protein [Tetrahymena
thermophila SB210]
Length = 1080
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 162/302 (53%), Gaps = 26/302 (8%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S + G++M NPF + S PP T+Y ++ R+FD G+ V KT LD V NV+PR
Sbjct: 621 DISTEICGVKMENPFGLASAPPTTSYPMIARSFDIGYDFAVVKTAVLDKDTVFNVSPRIF 680
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ Q + NIEL+S++ L+ ++ KQ+K YP+K+LI S+M YN+ W
Sbjct: 681 KVPDPLR-----QECSYGNIELVSEKSLKYWVEGAKQIKKDYPNKVLIGSLMAAYNQQDW 735
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+++ +V++ D IE+N SCPHGM E+ MG A G+D ++ ++ W+ ++ +P+ K+
Sbjct: 736 IDIMHQVKDAPFDMIELNLSCPHGMNEKGMGRACGEDPDIVRDITSWVTSQTKIPIIVKI 795
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYS--------TPG 277
TPN A+ A G++ V+ NT+ ++ P P E ++ PG
Sbjct: 796 TPNYGQAEILAKAAYEGGAKAVTLTNTMPGLVD-------PYPDGESFNGVGVEKNVAPG 848
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
G + + P A+ K + +AK + + + GG+ +G ++ GA +Q+C+
Sbjct: 849 GSTGSILRPFAMRKCVDVAKFV------PEIDIFASGGIISGDHGINYLHYGAKALQICS 902
Query: 338 GV 339
V
Sbjct: 903 AV 904
>gi|409418679|ref|ZP_11258656.1| dihydropyrimidine dehydrogenase subunit B, partial [Pseudomonas sp.
HYS]
Length = 301
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 124/206 (60%), Gaps = 4/206 (1%)
Query: 173 EETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDI 232
E G D IE+NF CPHGMPER MGAAVGQ +E+V W ++PV K+TPNITDI
Sbjct: 1 EPPGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTHGSLPVIVKLTPNITDI 60
Query: 233 TEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKV 292
+ AR A R G++ VS INTI S+ +DL+ + P V ST GGY AV PIAL V
Sbjct: 61 RQSARAAHRGGADAVSLINTINSITSVDLERMVAHPIVGDMSTHGGYCGSAVKPIALNMV 120
Query: 293 MSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352
IA+ + + GIGG+ + DAAEF+ LG VQVCT M+HG+ +V + +
Sbjct: 121 AEIARDPATH----GLPICGIGGIGSWRDAAEFVALGCGAVQVCTAAMLHGFRIVDEMKD 176
Query: 353 ELKDFMKMHNFSSIEDFRGASIEYFT 378
L +M + S+++F+G ++ + T
Sbjct: 177 GLSRWMDSQGYRSLQEFQGRAVGHTT 202
>gi|328706442|ref|XP_001944849.2| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like
[Acyrthosiphon pisum]
Length = 1297
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 193/403 (47%), Gaps = 52/403 (12%)
Query: 2 ASLNLNQIISNSNTSFAVNRRPGLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFV 61
A+ +++Q + N +P + P G R D DLS+ + GL+ NPF
Sbjct: 656 AAYHIHQYLQELYGYRNQNHQPSVSRPMLPGFRTAIDDV-----DLSVRMCGLRFMNPFG 710
Query: 62 IGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY----------------- 104
+ S PP T+ +++RAF GW V KT LD V NV+PR
Sbjct: 711 LASAPPTTSAAMIRRAFQAGWAFAVTKTFGLDKDLVTNVSPRIVGLGGHGVGVGSAASGI 770
Query: 105 --ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNK 162
L AG + A+ + NIELIS++ L+ ++LK +P ILIASIM Y +
Sbjct: 771 GPGTLGAGDSDVARNAFL---NIELISEKTAAYWLRSIRELKRDFPQHILIASIMCAYIE 827
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA----- 217
W L + G DA+E+N SCPHGM E MG A GQD L+E + W+ A
Sbjct: 828 NDWTSLARLACDAGADALELNLSCPHGMGESGMGLACGQDPVLVENISRWVKRVAVRPAS 887
Query: 218 ------TVPVWAKMTPNITDITEPARVALR-SGSEGVSAINTIMSVMGIDL--KTLRPEP 268
VPV+ K+TPN+TD+ AR A+R G++GV+A+NT+ ++ +D+ RP P
Sbjct: 888 DGGTPTAVPVFVKITPNVTDVVAVARAAVRLGGADGVTAVNTVSALGPLDVTGNGGRPWP 947
Query: 269 CV------EGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFN-----DKDYSLSGIGGVE 317
V +T GG S AV P+ L V ++++ + + + GGV+
Sbjct: 948 GVGRTTAETPRTTYGGMSGTAVRPMGLRAVSALSRALGPDATAGGDGGPPVQIMATGGVD 1007
Query: 318 TGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKM 360
+ +++ GA VQVC+ V + +V+ LK + M
Sbjct: 1008 SAAATLQYLYCGAKVVQVCSAVQNQDFTIVQDYITGLKALLYM 1050
>gi|403358016|gb|EJY78643.1| Dihydroorotate dehydrogenase family protein [Oxytricha trifallax]
Length = 1033
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/337 (34%), Positives = 173/337 (51%), Gaps = 38/337 (11%)
Query: 11 SNSNTSFAVNRRPGLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTN 70
SN + AV R PG +A + D+S V GL+M NPF + S PP T+
Sbjct: 547 SNGFSVPAVPRLPGFH-------------TAIDQVDISTEVVGLKMSNPFGLASAPPTTS 593
Query: 71 YTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISD 130
Y +++RAF+ G+ V KT SL+ V NV+PR ++ GA+ G NIELI++
Sbjct: 594 YPMIRRAFEVGFDFAVVKTFSLEKDAVSNVSPRIYKV--GADPLKLEPSFG--NIELITE 649
Query: 131 RPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGM 190
+ E ++ K LK +P+K++I SIM Y++ W EL G DA+E+N SCPHGM
Sbjct: 650 KTPEYWVQGCKDLKRDFPNKMVIGSIMASYSEQDWIELTKLANTAGFDALELNLSCPHGM 709
Query: 191 PERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAI 250
E+ MG A G+D +L + W+ + +PV K+TPN A AL +G++ V+
Sbjct: 710 NEKGMGRACGEDPVILGNITKWVVSNTDLPVIVKITPNYGQAEVLAEAALANGAKAVTLT 769
Query: 251 NTIMSVMGIDLKTLRPEPCVEGY--------STPGGYSCKAVHPIALGKVMSIAKMMKSE 302
NT+ + + P P E + +PGG + + P AL K +AKM+
Sbjct: 770 NTMPGL-------IDPLPSGEPFLPVGKAKQYSPGGTTGSVLRPFALRKCADVAKMV--- 819
Query: 303 FNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
D + G GG+ +G A F+ GA +Q+C+ V
Sbjct: 820 ---PDIEIFGSGGIISGDHAMSFLQYGAKALQICSAV 853
>gi|431896403|gb|ELK05815.1| Dihydropyrimidine dehydrogenase [NADP+] [Pteropus alecto]
Length = 368
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 129/228 (56%), Gaps = 7/228 (3%)
Query: 147 YPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLL 206
+P I+IASIM YN+ W EL E +G DA+E+N SCPHGM ER MG A GQD L+
Sbjct: 58 HPKLIVIASIMCSYNRNDWMELSQMAETSGADALELNLSCPHGMGERGMGLACGQDPELV 117
Query: 207 EEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLR 265
+C W+ VP +AK+TPN+TDI A+ A G++GV+A NT+ +MG+ T
Sbjct: 118 RNICRWVRQSVQVPFFAKLTPNVTDIVSIAKAAKEGGADGVTATNTVSGLMGLKADGTPW 177
Query: 266 PEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEF 325
P + +T GG S A+ PIAL V SIA+ + + + GG+++ +F
Sbjct: 178 PAVGIGKRTTYGGVSGTAIRPIALKAVTSIARALPG------FPILATGGIDSAESGLQF 231
Query: 326 ILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ GA+ +QVC+ V + +++ C L+ + + + ++D+ G S
Sbjct: 232 LHSGASVLQVCSAVQNQDFTVIEDYCTGLRALLYLKSIEELQDWDGQS 279
>gi|183231113|ref|XP_656317.2| dihydropyrimidine dehydrogenase [Entamoeba histolytica HM-1:IMSS]
gi|169802613|gb|EAL50934.2| dihydropyrimidine dehydrogenase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449710343|gb|EMD49439.1| dihydropyrimidine dehydrogenase, putative [Entamoeba histolytica
KU27]
Length = 901
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 171/358 (47%), Gaps = 39/358 (10%)
Query: 9 IISNSNTSFAVNRRPGLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPG 68
++++ F VN+ P P + D+S+TV+G++ NPF I S P
Sbjct: 413 VVASIAKEFGVNKIPKFHTPVD-------------DVDISVTVDGIKYENPFGISSAPVS 459
Query: 69 TNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELI 128
Y +KR F G+G + KT L+ N R ++ ++ + NI +I
Sbjct: 460 GTYDHLKRCFQAGFGFALTKTYPLEKDIQKNNHIRIVKVYDSQESTS------YNNIVMI 513
Query: 129 SDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCP- 187
S+ L+ K+LKA +P+K++IASIM N W L EE G DA+E+NFSCP
Sbjct: 514 SEHSHHYWLESIKKLKAEFPNKVVIASIMCMDNADDWHLLAKLSEEAGADALELNFSCPN 573
Query: 188 --HG------------MPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDIT 233
HG M A+G +E ++ +PV+ K+TPN+ +I
Sbjct: 574 ECHGNDGNEGGCEGGFKSHNAMAMAIGVSPAAIERCTRYVVESVHIPVYPKLTPNVGNIE 633
Query: 234 EPARVALRSGSEGVSAINTIMSVMGIDLKTLR-PEPCVEGYSTPGGYSCKAVHPIALGKV 292
E A A+R G+ GVS INT+ + I L P+ VE + GG S V PIA +
Sbjct: 634 ELAAAAMRGGASGVSTINTVFGISEITLSGHPWPQVGVERNTISGGLSGDLVRPIA---I 690
Query: 293 MSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRL 350
IA++++ N + + L GIGGV + A + I GA+ VQ+C+ V Y +V +
Sbjct: 691 RQIAQVLRHNENVRGH-LLGIGGVRSAETAMQLIYTGASVVQMCSSVQKWSYDIVDEI 747
>gi|407040682|gb|EKE40265.1| dihydropyrimidine dehydrogenase, putative [Entamoeba nuttalli P19]
Length = 901
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 171/358 (47%), Gaps = 39/358 (10%)
Query: 9 IISNSNTSFAVNRRPGLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPG 68
++++ F VN+ P P + D+S+TV+G++ NPF I S P
Sbjct: 413 VVASIAKEFGVNKIPKFHTPVD-------------DVDISVTVDGIKYENPFGISSAPVS 459
Query: 69 TNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELI 128
Y +KR F G+G + KT L+ N R ++ ++ + NI +I
Sbjct: 460 GTYEHLKRCFQAGFGFALTKTYPLEKDIQKNNHIRIVKVYDSQESTS------YNNIVMI 513
Query: 129 SDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCP- 187
S+ L+ K+LKA +P+K++IASIM N W L EE G DA+E+NFSCP
Sbjct: 514 SEHSHHYWLESIKKLKAEFPNKVVIASIMCMDNADDWHLLAKLSEEAGADALELNFSCPN 573
Query: 188 --HG------------MPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDIT 233
HG M A+G +E ++ +PV+ K+TPN+ +I
Sbjct: 574 ECHGNDGNEGGCEGGFKSHNAMAMAIGVSPAAIERCTRYVVESVHIPVYPKLTPNVGNIE 633
Query: 234 EPARVALRSGSEGVSAINTIMSVMGIDLKTLR-PEPCVEGYSTPGGYSCKAVHPIALGKV 292
E A A+R G+ GVS INT+ + I L P+ VE + GG S V PIA +
Sbjct: 634 ELAAAAMRGGASGVSTINTVFGISEITLSGHPWPQVGVERNTISGGLSGDLVRPIA---I 690
Query: 293 MSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRL 350
IA++++ N + + L GIGGV + A + I GA+ VQ+C+ V Y +V +
Sbjct: 691 RQIAQVLRHNENVRGH-LLGIGGVRSAETAMQLIYTGASVVQMCSSVQKWSYDIVDEI 747
>gi|167386568|ref|XP_001737815.1| dihydropyrimidine dehydrogenase [Entamoeba dispar SAW760]
gi|165899267|gb|EDR25906.1| dihydropyrimidine dehydrogenase, putative [Entamoeba dispar SAW760]
Length = 901
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 160/321 (49%), Gaps = 26/321 (8%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+TV+G++ NPF I S P Y +KR F G+G + KT L+ N R
Sbjct: 437 DISVTVDGIKYENPFGISSAPVSGTYDHLKRCFQAGFGFALTKTYPLEKDIQKNNHIRIV 496
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ ++ + NI +IS+ L+ K+LKA +P+K++IASIM N W
Sbjct: 497 KVYDSQESTS------YNNIVMISEHSHHYWLESIKKLKAEFPNKVVIASIMCMDNADDW 550
Query: 166 EELIDRVEETGIDAIEVNFSCP---HG------------MPERKMGAAVGQDCRLLEEVC 210
L EE G DA+E+NFSCP HG M A+G +E
Sbjct: 551 HLLAKLSEEAGADALELNFSCPNECHGNDGNEGGCEGGFKSHNAMAMAIGVSPAAIERCT 610
Query: 211 GWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLR-PEPC 269
++ +PV+ K+TPN+ +I E A A+R G+ GVS INT+ + I L P+
Sbjct: 611 RYVVESVHIPVYPKLTPNVGNIEELAAAAMRGGASGVSTINTVFGISEITLSGHPWPQVG 670
Query: 270 VEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG 329
VE + GG S V PIA + IA++++ N + + L GIGGV + A + I G
Sbjct: 671 VERNTISGGLSGDLVRPIA---IRQIAQVLRHNENVRGH-LLGIGGVRSAETAMQLIYTG 726
Query: 330 ANTVQVCTGVMMHGYGLVKRL 350
A+ VQ+C+ V Y +V +
Sbjct: 727 ASVVQMCSSVQKWSYDIVDEI 747
>gi|417350127|ref|ZP_12128593.1| dihydropyrimidine dehydrogenase, partial [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
gi|353570896|gb|EHC35019.1| dihydropyrimidine dehydrogenase, partial [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
Length = 292
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 124/200 (62%), Gaps = 5/200 (2%)
Query: 172 VEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITD 231
VEE G D IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKMTPNI D
Sbjct: 4 VEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKMTPNIGD 62
Query: 232 ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGK 291
+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KAV PIAL
Sbjct: 63 MCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVKPIALRF 122
Query: 292 VMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351
+ + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY +V+ +
Sbjct: 123 IQQL--RMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMA 178
Query: 352 EELKDFMKMHNFSSIEDFRG 371
L ++ F+S+++ G
Sbjct: 179 SGLSHYLADQGFASLQEMIG 198
>gi|440298597|gb|ELP91228.1| dihydropyrimidine dehydrogenase, putative, partial [Entamoeba
invadens IP1]
Length = 729
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 160/321 (49%), Gaps = 26/321 (8%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ +G++ NPF I S P Y +KR F+ G+G + KT L+ N R
Sbjct: 265 DISVVCDGIKYENPFGISSAPVSGTYDHLKRCFEAGFGFALTKTYPLEKDIQKNNHIRIV 324
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ ++ + NI +IS+ L K+LK +P+KI+IASIM NK W
Sbjct: 325 KVYDSQESTS------YNNIVMISEHSHHYWLDSIKKLKQEFPNKIVIASIMCMDNKEDW 378
Query: 166 EELIDRVEETGIDAIEVNFSCP---HGMPERK------------MGAAVGQDCRLLEEVC 210
+ L EE G DA+E+NFSCP HG ++ M A+G +E
Sbjct: 379 QSLAKMTEEAGADALELNFSCPNECHGNDGKEGGCTGGFKSHNAMAMAIGVSPSAIERCT 438
Query: 211 GWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLR-PEPC 269
++ +PV+ K+TPN+ +I E A A+R G+ GVS INT+ + I + P+
Sbjct: 439 RYVVDAVKIPVYPKLTPNVQNIEELAAAAMRGGATGVSTINTVFGISEITMSGHPWPQVG 498
Query: 270 VEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLG 329
V + GG S V PIA + IA++++ N + + L GIGGV + A + I G
Sbjct: 499 VNQNTISGGLSGDMVRPIA---IRQIAQVLRHNENIRGH-LLGIGGVRSAQTAMQLIYTG 554
Query: 330 ANTVQVCTGVMMHGYGLVKRL 350
A+ +Q+C+ + Y +V +
Sbjct: 555 ASVIQMCSSIQKWSYDIVDEI 575
>gi|417729061|ref|ZP_12377759.1| hypothetical protein SFK671_2726 [Shigella flexneri K-671]
gi|332755186|gb|EGJ85550.1| hypothetical protein SFK671_2726 [Shigella flexneri K-671]
Length = 289
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 121/196 (61%), Gaps = 5/196 (2%)
Query: 176 GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEP 235
G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKMTPNI D+ E
Sbjct: 5 GADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEV 63
Query: 236 ARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSI 295
A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV PIAL
Sbjct: 64 ALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIAL----RF 119
Query: 296 AKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELK 355
+ M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L
Sbjct: 120 IQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLS 179
Query: 356 DFMKMHNFSSIEDFRG 371
++ F S+++ G
Sbjct: 180 HYLADQGFDSLQEMVG 195
>gi|345306396|ref|XP_003428461.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like
[Ornithorhynchus anatinus]
Length = 1675
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 126/226 (55%), Gaps = 9/226 (3%)
Query: 150 KILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEV 209
+I+IASIM YNK W EL E +G DA+E+N SCPHGM ER MG A GQD L+ +
Sbjct: 1285 QIVIASIMCTYNKDDWTELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 1344
Query: 210 CGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPC 269
C WI +P +AK+TPN+TDI A+ A G++GV+A NT+ +MG+ P P
Sbjct: 1345 CRWIRQAVRIPFFAKLTPNVTDIVSIAKAAYEGGADGVTATNTVSGLMGLKADG-TPWPA 1403
Query: 270 VEG--YSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFIL 327
V +T GG S A+ PIAL V +IA+ + + + GG+++ +F+
Sbjct: 1404 VGAGKKTTYGGVSGTAIRPIALRAVSAIARALPG------FPILATGGIDSAESGLQFLH 1457
Query: 328 LGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
GA+ +QVC+ V + +++ C LK + + + + + G S
Sbjct: 1458 SGASVLQVCSAVQNQDFTVIEDYCTGLKALLYLKSIEELNAWDGQS 1503
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLD 93
D+S+ + GL+ PNPF + S P T+ ++++R+F+ GWG + KT SLD
Sbjct: 485 DISVEMAGLKFPNPFGLASATPATSASMIRRSFEAGWGFALTKTFSLD 532
>gi|301629981|ref|XP_002944110.1| PREDICTED: uncharacterized protein yeiA-like [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 113/180 (62%), Gaps = 4/180 (2%)
Query: 195 MGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIM 254
MGAAVGQ ++ V W + +PV K+TPNITD+ +PAR A G++ VS INTI
Sbjct: 1 MGAAVGQVPEYIQMVTAWCKHYSRLPVIVKLTPNITDVRQPARAAKAGGADAVSLINTIN 60
Query: 255 SVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIG 314
SVMG+DL + P +G+ + GGY AV PIAL V IA+ + +SGIG
Sbjct: 61 SVMGVDLDRMVMNPSTDGWGSHGGYCGPAVKPIALNMVAEIAR----DVQTAGLPISGIG 116
Query: 315 GVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASI 374
GV T DAAE+I LG TVQVCT M++G+ +V+ +C+ L + M H +++++DF+G ++
Sbjct: 117 GVTTWRDAAEYIALGCGTVQVCTAAMVYGFKIVQDMCDGLSNLMDEHGYATLDDFKGQAV 176
>gi|84579231|dbj|BAE73049.1| hypothetical protein [Macaca fascicularis]
Length = 468
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 111/188 (59%), Gaps = 11/188 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 285 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 344
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD I+IASIM Y
Sbjct: 345 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 398
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
NK W EL + E++G DA+E+N SCPHGM ER MG A GQD L+ +C W+ +P
Sbjct: 399 NKNDWMELAKKSEDSGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 458
Query: 221 VWAKMTPN 228
+ + P
Sbjct: 459 FFCQADPK 466
>gi|421836286|ref|ZP_16270814.1| dihydropyrimidine dehydrogenase subunit B, partial [Clostridium
botulinum CFSAN001627]
gi|409741874|gb|EKN41499.1| dihydropyrimidine dehydrogenase subunit B, partial [Clostridium
botulinum CFSAN001627]
Length = 293
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 119/200 (59%), Gaps = 5/200 (2%)
Query: 172 VEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITD 231
V E G D IE NFSCP M MG+ VGQ+ +L+++ C + +P+ AKMTPNI D
Sbjct: 5 VTEVGADIIECNFSCPQ-MTSSAMGSDVGQNPQLVKKYCEAVRRGTDIPILAKMTPNIGD 63
Query: 232 ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGK 291
++ PA ++ G+ G++ INTI + G+DL P V G S+ GYS KAV PIAL
Sbjct: 64 MSVPAIASIEGGATGIATINTIKCITGVDLDKFIGYPIVNGKSSISGYSGKAVKPIAL-- 121
Query: 292 VMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351
+ + ++ K +SGIGG+ET DAAEFILLG+ +QV T VM +GY +V+ +
Sbjct: 122 --RFIQQLVTDGRLKSVPISGIGGIETWEDAAEFILLGSRNLQVTTAVMQYGYRIVEDMI 179
Query: 352 EELKDFMKMHNFSSIEDFRG 371
E L +MK F +ED G
Sbjct: 180 EGLSYYMKEKGFEKLEDMVG 199
>gi|380805511|gb|AFE74631.1| dihydropyrimidine dehydrogenase [NADP+] isoform 1, partial [Macaca
mulatta]
Length = 191
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 108/177 (61%), Gaps = 11/177 (6%)
Query: 88 KTVSLDAAKVINVTPRYARLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQ 142
KT SLD V NV+PR R G+ G + G + NIELIS++ + +
Sbjct: 1 KTFSLDKDIVTNVSPRIIR------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTE 54
Query: 143 LKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQD 202
LKA +PD I+IASIM YNK W EL + E++G DA+E+N SCPHGM ER MG A GQD
Sbjct: 55 LKADFPDNIVIASIMCSYNKNDWMELAKKSEDSGADALELNLSCPHGMGERGMGLACGQD 114
Query: 203 CRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGI 259
L+ +C W+ +P +AK+TPN+TDI AR A G++GV+A NT+ +MG+
Sbjct: 115 PELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGL 171
>gi|415853277|ref|ZP_11529286.1| uncharacterized protein yeiA [Shigella flexneri 2a str. 2457T]
gi|417702965|ref|ZP_12352076.1| hypothetical protein SFK218_3124 [Shigella flexneri K-218]
gi|417723806|ref|ZP_12372611.1| hypothetical protein SFK304_2940 [Shigella flexneri K-304]
gi|417734162|ref|ZP_12382813.1| hypothetical protein SF274771_2646 [Shigella flexneri 2747-71]
gi|417744013|ref|ZP_12392539.1| dihydroorotate dehydrogenase family protein [Shigella flexneri
2930-71]
gi|420321020|ref|ZP_14822850.1| 4Fe-4S binding domain protein [Shigella flexneri 2850-71]
gi|420341007|ref|ZP_14842516.1| 4Fe-4S binding domain protein [Shigella flexneri K-404]
gi|313651254|gb|EFS15652.1| uncharacterized protein yeiA [Shigella flexneri 2a str. 2457T]
gi|332756236|gb|EGJ86587.1| hypothetical protein SF274771_2646 [Shigella flexneri 2747-71]
gi|332765954|gb|EGJ96164.1| dihydroorotate dehydrogenase family protein [Shigella flexneri
2930-71]
gi|333001825|gb|EGK21391.1| hypothetical protein SFK218_3124 [Shigella flexneri K-218]
gi|333016664|gb|EGK35993.1| hypothetical protein SFK304_2940 [Shigella flexneri K-304]
gi|391248313|gb|EIQ07555.1| 4Fe-4S binding domain protein [Shigella flexneri 2850-71]
gi|391271537|gb|EIQ30411.1| 4Fe-4S binding domain protein [Shigella flexneri K-404]
Length = 282
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 119/192 (61%), Gaps = 5/192 (2%)
Query: 180 IEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVA 239
IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKMTPNI D+ E A A
Sbjct: 2 IECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEVALAA 60
Query: 240 LRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMM 299
R G++G++AINT+ S+ IDL P V G S+ GYS KAV PIAL + M
Sbjct: 61 KRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIAL----RFIQQM 116
Query: 300 KSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMK 359
++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L ++
Sbjct: 117 RTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLA 176
Query: 360 MHNFSSIEDFRG 371
F S+++ G
Sbjct: 177 DQGFDSLQEMVG 188
>gi|213029592|ref|ZP_03344039.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 191
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 119/192 (61%), Gaps = 5/192 (2%)
Query: 180 IEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVA 239
IE NFSCP M MG+ VGQ L+E+ C + +++P+ AKMTPNI D+ E A A
Sbjct: 2 IECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAA 60
Query: 240 LRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMM 299
R G++G++ INT+ S+ IDL P V G S+ GYS KAV PIAL + + M
Sbjct: 61 KRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVKPIALRFIQQLR--M 118
Query: 300 KSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMK 359
E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L ++
Sbjct: 119 HPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLA 176
Query: 360 MHNFSSIEDFRG 371
F+S+++ G
Sbjct: 177 DQGFASLQEMIG 188
>gi|417682805|ref|ZP_12332158.1| hypothetical protein SB359474_2529 [Shigella boydii 3594-74]
gi|421683199|ref|ZP_16122995.1| 4Fe-4S binding domain protein [Shigella flexneri 1485-80]
gi|332093489|gb|EGI98547.1| hypothetical protein SB359474_2529 [Shigella boydii 3594-74]
gi|404339053|gb|EJZ65493.1| 4Fe-4S binding domain protein [Shigella flexneri 1485-80]
Length = 289
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 120/196 (61%), Gaps = 5/196 (2%)
Query: 176 GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEP 235
G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKMTPNI D+ E
Sbjct: 5 GADMIECNFSCPQ-MTSHAMGSDVGQSPVLVEKYCRAVKRGSTLPMLAKMTPNIGDMCEV 63
Query: 236 ARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSI 295
A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV PIAL
Sbjct: 64 ALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIAL----RF 119
Query: 296 AKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELK 355
+ M++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +G +V+ + L
Sbjct: 120 IQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGNRIVEDMASGLS 179
Query: 356 DFMKMHNFSSIEDFRG 371
++ F S+++ G
Sbjct: 180 HYLADQGFDSLQEMVG 195
>gi|315231294|ref|YP_004071730.1| dihydroorotate dehydrogenase [Thermococcus barophilus MP]
gi|315184322|gb|ADT84507.1| dihydroorotate dehydrogenase [Thermococcus barophilus MP]
Length = 299
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 167/329 (50%), Gaps = 32/329 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
LSI V L++ NP ++ SG +++RA EG GAVV K++ ++ K N P
Sbjct: 2 LSIEVAKLKLENPLILASGVADMTPDLLRRAHKEGAGAVVTKSIGIEPRKGYN-NPTIVE 60
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
L G + GWE KEFK K +P +I SI + ++ +
Sbjct: 61 LPYGLINAMGLPNPGWE-----------AFYKEFKNEKFDFP---VIVSIFGK-DEREFA 105
Query: 167 ELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMT 226
L +++ E DA E+N SCPH + G +GQ+ ++ +V + PV AK+T
Sbjct: 106 FLAEKLSEVA-DAFELNLSCPHA---KGYGMEIGQNPEMVYKVVKAVKDTTDKPVIAKLT 161
Query: 227 PNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHP 286
PNI DIT+ A R+ ++ VSAINT+ +V ID+ RP + GGYS + P
Sbjct: 162 PNIDDITKIGLAAERAEADAVSAINTVKAV-AIDIYARRPILS----NKVGGYSGPGIKP 216
Query: 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGL 346
IAL V +AK++ D + G+GG+ T DA EF++ GA +Q+ T V + G+ +
Sbjct: 217 IALRAVYDLAKVL-------DIDIIGVGGITTWQDAVEFLMAGAKALQIGTAVSLRGFKV 269
Query: 347 VKRLCEELKDFMKMHNFSSIEDFRGASIE 375
K + E + F+ F+SIE+ G ++E
Sbjct: 270 FKEINEGIGRFLNEEGFNSIEEIVGIALE 298
>gi|158321476|ref|YP_001513983.1| dihydroorotate dehydrogenase family protein [Alkaliphilus
oremlandii OhILAs]
gi|158141675|gb|ABW19987.1| dihydroorotate dehydrogenase family protein [Alkaliphilus
oremlandii OhILAs]
Length = 372
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 184/363 (50%), Gaps = 40/363 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ GL + NP ++ +GP + ++M++A + G GAVV KT++ + NV PR
Sbjct: 2 DLSVNFLGLSLKNPIIVSAGPLTGSGSMMRKAIEAGAGAVVTKTIANEIRP--NVRPRLV 59
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ R G + NIEL S LE E K ++IA+I+ + +
Sbjct: 60 KGREGLH-----------NIELYSGFTLEEWENEIAYAK--IHGAVVIANILG-HTSSEI 105
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ +VE+ G DA+E+ SCPHG + + + +L E ++ + +PV K+
Sbjct: 106 AYIAQKVEQFGADAVELGVSCPHG---EGLEGVISEPSKLYEFTKAVVD-RIKIPVMVKL 161
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDL---KTLRPEPCVEGYSTPGGYSCK 282
+ N ++ + AR A ++G+ +S I+T+ S+ G+D+ + L P T GGYS
Sbjct: 162 SSNTVNVVKLARAAEKAGASAISGIDTVRSIAGVDIEKGRVLLP--------TFGGYSGD 213
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ PI L + SIA+ + GIGG+ E+++LGA+TVQVCT ++++
Sbjct: 214 AIRPIGLAAIASIAQA-------TSIPICGIGGITNYEHILEYMMLGASTVQVCTSIILN 266
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQ 402
GY + L + L +M H++ + ++ +G ++ + E+ Q+ + Q K +Q
Sbjct: 267 GYEHISTLLDGLNGWMAQHSYRNFDEIKGMALVSLKSFEEI--KQEPYVSQPVGNCKSMQ 324
Query: 403 SDK 405
++
Sbjct: 325 CNR 327
>gi|222874561|gb|EEF11692.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 120/208 (57%), Gaps = 6/208 (2%)
Query: 195 MGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIM 254
MGAAVGQ ++ V W + +PV K+TPNITD+ PAR A G++ VS INTI
Sbjct: 1 MGAAVGQVPEYIQMVTQWCKQYSRLPVIVKLTPNITDVRFPARAAKAGGADAVSLINTIN 60
Query: 255 SVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIG 314
S+MG++L TL P +G + GGY AV PIA V IA+ + +SGIG
Sbjct: 61 SLMGVNLDTLVMHPSTDGQGSHGGYCGPAVKPIAQNMVAEIAR----DPQTAGLPISGIG 116
Query: 315 GVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASI 374
G+ T DAAE+I LG VQVCT M++G+ +V+ +C+ L ++M H F+ IEDF+G ++
Sbjct: 117 GITTWKDAAEYIALGCGNVQVCTAAMVYGFRIVQDMCDGLSNYMDAHGFARIEDFQGRAV 176
Query: 375 EYFTTHTE--LVRMQQEAIQQRKAVRKG 400
+ L +++ I Q ++ G
Sbjct: 177 PTVRDWKDLNLNHIEKAVINQDSCIQCG 204
>gi|416301181|ref|ZP_11652913.1| dihydropyrimidine dehydrogenase [Shigella flexneri CDC 796-83]
gi|420326239|ref|ZP_14827991.1| 4Fe-4S binding domain protein [Shigella flexneri CCH060]
gi|420351664|ref|ZP_14852848.1| 4Fe-4S binding domain protein [Shigella boydii 4444-74]
gi|320184421|gb|EFW59230.1| dihydropyrimidine dehydrogenase [Shigella flexneri CDC 796-83]
gi|391250742|gb|EIQ09962.1| 4Fe-4S binding domain protein [Shigella flexneri CCH060]
gi|391287391|gb|EIQ45921.1| 4Fe-4S binding domain protein [Shigella boydii 4444-74]
Length = 282
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 118/192 (61%), Gaps = 5/192 (2%)
Query: 180 IEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVA 239
IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKMTPNI D+ E A A
Sbjct: 2 IECNFSCPQ-MTSHAMGSDVGQSPVLVEKYCRAVKRGSTLPMLAKMTPNIGDMCEVALAA 60
Query: 240 LRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMM 299
R G++G++AINT+ S+ IDL P V G S+ GYS KAV PIAL + M
Sbjct: 61 KRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIAL----RFIQQM 116
Query: 300 KSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMK 359
++ +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +G +V+ + L ++
Sbjct: 117 RTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGNRIVEDMASGLSHYLA 176
Query: 360 MHNFSSIEDFRG 371
F S+++ G
Sbjct: 177 DQGFDSLQEMVG 188
>gi|296208611|ref|XP_002751145.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Callithrix
jacchus]
Length = 974
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 155/334 (46%), Gaps = 69/334 (20%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S P T+ ++++RAF+ GWG + KT SLD V NV+PR
Sbjct: 532 DISVEMAGLKFINPFGLASATPATSTSMIRRAFEVGWGFALTKTFSLDKDIVTNVSPRII 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
R G+ G + G + NIELIS++ + +LKA +PD
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVNELKADFPD----------- 634
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
D L+ +C W+ +P
Sbjct: 635 ----------------------------------------NDPELVRNICRWVRQAVRIP 654
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 279
+AK+TPN+TDI AR A G++GV+A NT+ +MG+ T P + +T GG
Sbjct: 655 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKSDGTPWPAVGIAKRTTYGGV 714
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ PIAL V SIA+ + + + GG+++ A +F+ GA+ +QVC+ +
Sbjct: 715 SGTAIRPIALRAVTSIARALPG------FPILATGGIDSAESALQFLHSGASVLQVCSAI 768
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++ C LK + + + ++D+ G S
Sbjct: 769 QNQDFTVIEDYCTGLKAMLYLKSIEELQDWDGQS 802
>gi|256810615|ref|YP_003127984.1| dihydroorotate dehydrogenase 1B [Methanocaldococcus fervens AG86]
gi|256793815|gb|ACV24484.1| dihydroorotate dehydrogenase family protein [Methanocaldococcus
fervens AG86]
Length = 302
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 168/319 (52%), Gaps = 29/319 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + G++ NP + SG G + +KR G GAV K++ L N P +
Sbjct: 2 LETEICGIKFKNPVFLASGIMGETGSALKRIAKGGAGAVTTKSIGL------NPNPGHR- 54
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKA-LYPDKILIASIMEEYNKAAW 165
N + G+ N + + ++ L+E K+++A L + I + N+ +
Sbjct: 55 -----NPTIVEVYGGFLNAMGLPNPGIDEYLEEIKEVRAELNRMNVKIIGSVYGKNEEEF 109
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+ R+E+ +D IE+N SCPH + GA +GQ+ L VC + VPV+AK+
Sbjct: 110 AEVAKRMEKY-VDIIELNISCPHA---KGYGATIGQNPELSYSVCKAVKKSVKVPVFAKL 165
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+TDI E A+ + +G +G+ AINT+ M ID+K +P + G + GG S KA+
Sbjct: 166 TPNVTDIIEIAQAVVDAGVDGLVAINTVRG-MAIDIKAKKP---ILG-NKFGGLSGKAIK 220
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PI + K++ + + D + G+GG+ G DA E+++ GA+ VQ+ +GV GY
Sbjct: 221 PIGI-------KVVWDLYENFDVPIIGVGGIMNGEDAIEYMMAGASAVQIGSGVYYRGYD 273
Query: 346 LVKRLCEELKDFMKMHNFS 364
+ K++C+E+ DF+K N +
Sbjct: 274 IFKKVCDEIIDFLKEENLT 292
>gi|195168436|ref|XP_002025037.1| GL26798 [Drosophila persimilis]
gi|194108482|gb|EDW30525.1| GL26798 [Drosophila persimilis]
Length = 393
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 117/205 (57%), Gaps = 7/205 (3%)
Query: 157 MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK 216
M +N+A W EL + E +G DA+E+N SCPHGM ER MG A GQ ++E++ W+
Sbjct: 1 MCSFNEADWTELSIKAEASGADALELNLSCPHGMGERGMGLACGQIPDMVEQISRWVRNA 60
Query: 217 ATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYST 275
+P + K+TPNITDIT A+ A G++G SAINT+ +MG+ T P E +T
Sbjct: 61 VKLPFFIKLTPNITDITAIAKAAKLGGADGCSAINTVQGLMGLKADATAWPAVGEEKRTT 120
Query: 276 PGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQV 335
GG S A P+AL + IAK + D+ + GIGG+++G A +F+ GA +Q+
Sbjct: 121 YGGVSGNATRPMALRAISEIAKKI------PDFPILGIGGIDSGEVALQFLQAGATVLQI 174
Query: 336 CTGVMMHGYGLVKRLCEELKDFMKM 360
C+ V + L+ C LK + +
Sbjct: 175 CSSVQNQDFTLIDDYCTSLKALLYL 199
>gi|417738969|ref|ZP_12387549.1| hypothetical protein SF434370_2306 [Shigella flexneri 4343-70]
gi|332754780|gb|EGJ85145.1| hypothetical protein SF434370_2306 [Shigella flexneri 4343-70]
Length = 272
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 112/182 (61%), Gaps = 4/182 (2%)
Query: 190 MPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSA 249
M MG+ VGQ L+E+ C + +T+P+ AKMTPNI D+ E A A R G++G++A
Sbjct: 1 MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAA 60
Query: 250 INTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYS 309
INT+ S+ IDL P V G S+ GYS KAV PIAL + M++ +D+
Sbjct: 61 INTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIAL----RFIQQMRTHPELRDFP 116
Query: 310 LSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDF 369
+SGIGG+ET DAAEF+LLGA T+QV TG+M +GY +V+ + L ++ F S+++
Sbjct: 117 ISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFDSLQEM 176
Query: 370 RG 371
G
Sbjct: 177 VG 178
>gi|14591298|ref|NP_143376.1| dihydroorotate dehydrogenase 1B [Pyrococcus horikoshii OT3]
gi|9297037|sp|O59185.1|PYRDB_PYRHO RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|3257941|dbj|BAA30624.1| 303aa long hypothetical dihydroorotate dehydrogenase [Pyrococcus
horikoshii OT3]
Length = 303
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 165/333 (49%), Gaps = 40/333 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + + G++ NP ++ SG +++RA +EG G VV K++ + K + P
Sbjct: 6 LEVKLFGIRFENPLILASGVVDMTPELLRRAHNEGAGGVVTKSIGKEPRKGYD-NPTIVE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM----EEYNK 162
L G + GWE L EF + +P +I SI EE+
Sbjct: 65 LPYGLINAMGLPNPGWE-----------AFLNEFIDERFDFP---VIVSIFGGTPEEF-- 108
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
L +++E DA E+N SCPH + G +GQD + + EV + PV
Sbjct: 109 ---AFLAEKLEPVA-DAFELNLSCPHA---KGYGMEIGQDPKNVYEVVKAVKDVTDKPVI 161
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
AK+TPN+ DIT+ A R G++GVSAINT+ ++ ID+ RP + GGYS
Sbjct: 162 AKLTPNVNDITKLGLAAERGGADGVSAINTVKAI-AIDIYAKRPILS----NKVGGYSGP 216
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
+ PIAL V +AK++ D + GIGG+ + DA EF+L GA+ +Q+ T V +
Sbjct: 217 GIKPIALRAVYDLAKVL-------DIPVIGIGGITSWRDAVEFLLAGASALQIGTAVYLR 269
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
G+ + K + + +++K FSSI D G +++
Sbjct: 270 GFKVFKEISNGIIEYLKEEGFSSIRDIIGLALK 302
>gi|340386246|ref|XP_003391619.1| PREDICTED: dihydropyrimidine dehydrogenase [NADP+]-like, partial
[Amphimedon queenslandica]
Length = 353
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 114/200 (57%), Gaps = 9/200 (4%)
Query: 174 ETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDIT 233
E G DA+E+N SCPHGM ER MG A GQD L+ E+C W+ +P +AKMTPN+TDI
Sbjct: 1 EAGADALELNLSCPHGMGERGMGLACGQDPELVTEICRWVREAVKIPFFAKMTPNVTDIV 60
Query: 234 EPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGGYSCKAVHPIALGK 291
+ AR + + G+ GV+AINT+ +MG+ + P P V E +T GG S A+ PIAL
Sbjct: 61 DIARASQKGGATGVTAINTVSGLMGVKANGI-PWPAVGNENRTTYGGVSGNAIRPIALRD 119
Query: 292 VMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351
V +IA+ + + + GG+++ +F+ GA +QVC+ + Y L+
Sbjct: 120 VSAIARALPG------FPILAAGGIDSAEAGLQFLHCGATLLQVCSAIHNQEYTLIDDYV 173
Query: 352 EELKDFMKMHNFSSIEDFRG 371
LK + + + S + D+ G
Sbjct: 174 TGLKALLYLQSVSELGDWDG 193
>gi|289192997|ref|YP_003458938.1| dihydroorotate dehydrogenase family protein [Methanocaldococcus sp.
FS406-22]
gi|288939447|gb|ADC70202.1| dihydroorotate dehydrogenase family protein [Methanocaldococcus sp.
FS406-22]
Length = 302
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 174/329 (52%), Gaps = 28/329 (8%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + G++ NP + SG G + +KR G GAV K++ L+ + P
Sbjct: 2 LRTKICGIEFKNPVFLASGIMGETGSALKRIAKGGAGAVTTKSIGLEPNPG-HRNPTIVE 60
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
+ G + +G N + D LE + K +L + D +I S+ + N+ +
Sbjct: 61 VYGGFLNA-----MGLPNPGI--DEYLEEIKKVRDELNRM--DVKIIGSVYGK-NEEEFA 110
Query: 167 ELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMT 226
E+ R+E+ +D IE+N SCPH + GA +GQ+ L VC + VPV+AK+T
Sbjct: 111 EVAKRMEKY-VDIIELNISCPHA---KGYGATIGQNPDLSYSVCKAVKKAVKVPVFAKLT 166
Query: 227 PNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHP 286
PN+TDI E A+ + +G +G+ AINT+ M ID+K +P + G + GG S +A+ P
Sbjct: 167 PNVTDIVEIAQAVVDAGVDGLVAINTVRG-MAIDIKAKKP---ILG-NKFGGLSGRAIKP 221
Query: 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGL 346
I + K++ + + D + G+GG+ +G DA E+++ GA+ VQ+ +GV GY +
Sbjct: 222 IGI-------KVVWDLYENFDVPIIGVGGIMSGEDAIEYMMAGASAVQIGSGVYYRGYDI 274
Query: 347 VKRLCEELKDFMKMHNFSSIEDFRGASIE 375
K++C+E+ F+K N ++E+ G + E
Sbjct: 275 FKKVCDEIISFLKEENL-TLEEIIGIAHE 302
>gi|374635910|ref|ZP_09707498.1| dihydroorotate dehydrogenase family protein [Methanotorris
formicicus Mc-S-70]
gi|373560793|gb|EHP87046.1| dihydroorotate dehydrogenase family protein [Methanotorris
formicicus Mc-S-70]
Length = 304
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 168/331 (50%), Gaps = 30/331 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L+ + G+ NP + +G G + +KR G GAV K+V L+ K + P
Sbjct: 2 LNTVICGINFKNPVFLAAGVMGETGSALKRMAKNGAGAVCTKSVGLEK-KEGHKNPTIVE 60
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
+ G + N + + +E ++E ++++ ++ + I Y K E
Sbjct: 61 VEGG-----------FLNAMGLPNPGVEEYIEEIEKVRDDL-KRMNVKIIGSIYGKDEKE 108
Query: 167 ELI--DRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
I +R+E +D IE+N SCPH GA +GQD L +V + +PV+AK
Sbjct: 109 FAIVAERIENY-VDMIELNISCPHA--GGGYGATIGQDPNLSYKVVASVKDAVKIPVFAK 165
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN+TDI E A+ + +G +G++AINT+ M ID++ +P + GG S K +
Sbjct: 166 LTPNVTDIKEIAKAVVDAGVDGITAINTLGPGMVIDIEVGKPILS----NKFGGMSGKTI 221
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ K++ + D + G+GG+ TG DA EFI+ GA VQV TGV GY
Sbjct: 222 KPIAI-------KIVYDLYETVDVPIIGVGGITTGRDALEFIMAGACAVQVGTGVYYRGY 274
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
+ +++CEE++ F+K N ++D G + E
Sbjct: 275 DIFRKICEEMEMFLKEKNV-KLKDLIGCAHE 304
>gi|297619716|ref|YP_003707821.1| dihydroorotate dehydrogenase family protein [Methanococcus voltae
A3]
gi|297378693|gb|ADI36848.1| dihydroorotate dehydrogenase family protein [Methanococcus voltae
A3]
Length = 319
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 168/319 (52%), Gaps = 26/319 (8%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGAN 112
G+ NP + +G G + M+R G GAV K++ ++ N P + G
Sbjct: 23 GINFKNPVFLAAGVMGETGSAMRRIAKNGAGAVCTKSIGIEKKPGHN-NPTMVEVEGGFL 81
Query: 113 GSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRV 172
+ +G N + D +E + KQ+ L D +I SI + N+ + E+ +++
Sbjct: 82 NA-----MGLPNPGI--DEYIEEIEYVRKQMHEL--DVKIIGSIYGK-NEKEFAEVAEKI 131
Query: 173 EETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDI 232
+ +D IE+N SCPH G+++GQDC L +V + + VPV AK+TPN+TDI
Sbjct: 132 VDY-VDLIELNISCPHA--GGGYGSSIGQDCNLSHKVVSSVKNLSDVPVVAKLTPNVTDI 188
Query: 233 TEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKV 292
E A +G++G++AINT+ M ID+ +P + G + GG S KAV PIA+ V
Sbjct: 189 KEIAVSVEDAGADGITAINTLGPGMVIDIDAKKP---ILG-NIYGGMSGKAVKPIAIKNV 244
Query: 293 MSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352
I ++ D + G+GG+ TG DA EF++ GA+ VQV TGV GY + ++ +
Sbjct: 245 YDI-------YSAVDIPIIGVGGITTGRDAIEFMMAGASAVQVGTGVYYRGYDIFNKIND 297
Query: 353 ELKDFMKMHNFSSIEDFRG 371
E+K+++ + N S+ D G
Sbjct: 298 EIKEYL-LKNELSMNDIIG 315
>gi|307172628|gb|EFN63987.1| Dihydropyrimidine dehydrogenase [NADP+] [Camponotus floridanus]
Length = 383
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 9/223 (4%)
Query: 157 MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK 216
M YNKA W EL + E G D +E+N SCPHGM E MG A GQD L+ + W+
Sbjct: 1 MCTYNKADWTELAKKAEAAGSDGLELNLSCPHGMGESGMGLACGQDPELVRNISRWVREA 60
Query: 217 ATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYS 274
+P + K+TPNITDI A+ A ++GV+AINT+ +MG+ P P V +
Sbjct: 61 VKIPFFVKLTPNITDILSIAKAAYEGKADGVTAINTVSGLMGL-YADATPWPAVGLNKLT 119
Query: 275 TPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQ 334
T GG S A P AL + +++K + + + G GGV++ A +F+ GA+ +Q
Sbjct: 120 TYGGVSGNATRPQALRIISTVSKHLPG------FPILGAGGVDSADVALQFLHCGASVIQ 173
Query: 335 VCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYF 377
+C+ + + L+ LK + + + ++D+ G S F
Sbjct: 174 ICSAIQNQDFTLIDDYVTGLKALLYLKSLEQVKDWDGQSPPTF 216
>gi|261403127|ref|YP_003247351.1| dihydroorotate dehydrogenase 1B [Methanocaldococcus vulcanius M7]
gi|261370120|gb|ACX72869.1| dihydroorotate dehydrogenase family protein [Methanocaldococcus
vulcanius M7]
Length = 302
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 163/322 (50%), Gaps = 35/322 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSL---DAAKVINVTPR 103
L I + G++ NP + SG G + +KR G GAVV K+V L K +
Sbjct: 2 LEIDICGIKFKNPVFLASGIMGETGSALKRIAKGGSGAVVTKSVGLYPNPGHKNPTIVEV 61
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
Y G+ N + + ++ ++E K +K +K+ + I Y K
Sbjct: 62 YG---------------GFLNAMGLPNPGVDEYIEEIKSVKKDL-EKMGVRVIGSIYGKD 105
Query: 164 AWEEL-IDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
E + + + E+ +DAIE+N SCPH + GA +GQ+ + VC + +PV+
Sbjct: 106 EKEFMDVAKKIESFVDAIELNISCPHA---KGYGATIGQNPEMSYNVCAAVKDVVKIPVF 162
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
AK+TPN++DI E A + +G +G+ AINT+ M ID+K +P + GG S K
Sbjct: 163 AKLTPNVSDIVEIAGAVVEAGVDGLVAINTVRG-MVIDIKAKKPILS----NKFGGLSGK 217
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ P+ + V + + + D + G+GG+ +G DA E+++ GA+ VQV +GV
Sbjct: 218 AIKPVGIKAVWDL-------YENFDVPIIGVGGIMSGEDAIEYMMAGASAVQVGSGVYYR 270
Query: 343 GYGLVKRLCEELKDFMKMHNFS 364
GY + K++C+E+ F+K N +
Sbjct: 271 GYNVFKKICDEICSFLKEENLT 292
>gi|387912859|sp|Q9V0Y6.2|PYRDB_PYRAB RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|380741404|tpe|CCE70038.1| TPA: dihydroorotate dehydrogenase 1B [Pyrococcus abyssi GE5]
Length = 299
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 162/331 (48%), Gaps = 36/331 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + + G++ NP ++ SG +++RA EG G VV K++ ++ K P
Sbjct: 2 LEVNLFGIKFKNPLILASGVVDMTPELLRRAHREGAGGVVTKSIGMEPRKGYE-NPTIVE 60
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
L G + GWE L+EF++ K +P +I SI E
Sbjct: 61 LPYGLINAMGLPNPGWE-----------AFLEEFRKEKFDFP---VIVSIF----GGTPE 102
Query: 167 ELIDRVEETG--IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
E E+ G DA E+N SCPH + G +GQ + EV + PV AK
Sbjct: 103 EFAFLAEKLGEVADAFELNLSCPHA---KGYGMEIGQKPENVYEVVKAVKDVTDKPVIAK 159
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN++DI E A ++G++GVSAINT+ ++ ID+ RP + GGYS V
Sbjct: 160 LTPNVSDIRELGLAAEKAGADGVSAINTVKAI-AIDIYAKRPILS----NKFGGYSGPGV 214
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V +A + D + GIGG+ T DA EF+L GA+ +Q+ T V + G+
Sbjct: 215 KPIALRAVYDLASSL-------DIPVIGIGGITTWQDAVEFLLAGASALQIGTAVYLRGF 267
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
+ + + E + ++K +SS+++ G +++
Sbjct: 268 SVFREIAEGISRYLKEEGYSSVKEIIGLALK 298
>gi|14520860|ref|NP_126335.1| dihydroorotate dehydrogenase 1B [Pyrococcus abyssi GE5]
gi|5458077|emb|CAB49566.1| pyrD dihydroorotase dehydrogenase [Pyrococcus abyssi GE5]
Length = 303
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 162/331 (48%), Gaps = 36/331 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + + G++ NP ++ SG +++RA EG G VV K++ ++ K P
Sbjct: 6 LEVNLFGIKFKNPLILASGVVDMTPELLRRAHREGAGGVVTKSIGMEPRKGYE-NPTIVE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
L G + GWE L+EF++ K +P +I SI E
Sbjct: 65 LPYGLINAMGLPNPGWE-----------AFLEEFRKEKFDFP---VIVSIF----GGTPE 106
Query: 167 ELIDRVEETG--IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
E E+ G DA E+N SCPH + G +GQ + EV + PV AK
Sbjct: 107 EFAFLAEKLGEVADAFELNLSCPHA---KGYGMEIGQKPENVYEVVKAVKDVTDKPVIAK 163
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN++DI E A ++G++GVSAINT+ ++ ID+ RP + GGYS V
Sbjct: 164 LTPNVSDIRELGLAAEKAGADGVSAINTVKAI-AIDIYAKRPILS----NKFGGYSGPGV 218
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIAL V +A + D + GIGG+ T DA EF+L GA+ +Q+ T V + G+
Sbjct: 219 KPIALRAVYDLASSL-------DIPVIGIGGITTWQDAVEFLLAGASALQIGTAVYLRGF 271
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
+ + + E + ++K +SS+++ G +++
Sbjct: 272 SVFREIAEGISRYLKEEGYSSVKEIIGLALK 302
>gi|222445341|ref|ZP_03607856.1| hypothetical protein METSMIALI_00969 [Methanobrevibacter smithii
DSM 2375]
gi|261350098|ref|ZP_05975515.1| dihydroorotate oxidase [Methanobrevibacter smithii DSM 2374]
gi|222434906|gb|EEE42071.1| dihydroorotate oxidase [Methanobrevibacter smithii DSM 2375]
gi|288860884|gb|EFC93182.1| dihydroorotate oxidase [Methanobrevibacter smithii DSM 2374]
Length = 303
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 166/333 (49%), Gaps = 37/333 (11%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L V G++ NP ++ +G G+N + M G VV+K+ SL+ P YA
Sbjct: 2 LRTNVCGVEFRNPLMLAAGVMGSNASSMNWILKSGAAGVVSKSFSLEP------NPGYA- 54
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM----EEYNK 162
N + G G N +S+ E +E K++ + IASI EE++K
Sbjct: 55 -----NPTTVGVECGIINAIGLSNPGAENFKEELKRID--RKGNVSIASIYGATPEEFSK 107
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
L+ +E+ +D IE+N SCPH M GA++GQD L ++ A PV
Sbjct: 108 -----LVLEIEDY-VDMIELNISCPHAM--EGYGASIGQDANLTHKIVSAAKDSANKPVI 159
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
AK+TPN+TDI E A A +G++G++ IN++ M I++ RP + GG S K
Sbjct: 160 AKLTPNVTDIVEIAVAAQDAGADGLTLINSLGPGMKINIDVARPVLS----NKFGGMSGK 215
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ PIAL V ++ +++ D + G+GG+ D EF+ GA VQ+ T +M
Sbjct: 216 AIKPIALRNVYTV-------YDNVDIPIIGVGGISNFEDVVEFLFAGARAVQIGTSIMDE 268
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
G + ++ ++L++FM + SI++ G + E
Sbjct: 269 GVEVFDKINKDLEEFMNKKGYESIDEMIGLAHE 301
>gi|389861693|ref|YP_006363933.1| dihydroorotate dehydrogenase family protein [Thermogladius
cellulolyticus 1633]
gi|388526597|gb|AFK51795.1| dihydroorotate dehydrogenase family protein [Thermogladius
cellulolyticus 1633]
Length = 408
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 176/382 (46%), Gaps = 53/382 (13%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
P L + + GL+ NP + + P + +MK D G G VVAKT+S+ A + PR
Sbjct: 4 PSLEVEIAGLRFKNPLMNAACPVSRDAEMMKALIDNGVGGVVAKTISVKPA----IVPR- 58
Query: 105 ARLRAGANGSAKGQII----------------------GWENIELISDRPLETMLKEFKQ 142
+ A G A+ Q++ G N EL SD P E L+
Sbjct: 59 PSMAAVDRGMARMQVLKTIKPGDIRIVNVDSGNNRFIYGVLNAELWSDIPAEHYLEREYP 118
Query: 143 LKALYPDK---ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAV 199
+ Y K IASI Y L +VE+ G+DAIE FS + +
Sbjct: 119 IVKEYAKKNNVPFIASI--GYTPEELSNLGPKVEKAGVDAIE--FSTHY----------I 164
Query: 200 GQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGI 259
G+D R + E + +VP++AK++P +I E + + G G+ A NTI + I
Sbjct: 165 GRDYRPVVEAAKALRESVSVPIFAKLSPFTPNIPELVKELEKVGVNGIVATNTIGPALSI 224
Query: 260 DLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETG 319
D++T P V G G S A+ P+AL V +A N K + G+GG+ G
Sbjct: 225 DVETGMP--IVGGPYGYGWLSGPALKPLALAVVSQVA------LNSK-LPVIGVGGISRG 275
Query: 320 GDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTT 379
D E+ + GA+ VQ+CT ++ G G+ KR+ +E++D++ H + SI D +G +++Y
Sbjct: 276 VDVIEYFMAGASAVQICTAALIEGLGVFKRILKEVEDWLARHEYDSILDVKGLALKYLKP 335
Query: 380 HTELVRMQQEAIQQRKAVRKGL 401
V + + ++K + G
Sbjct: 336 EPRRVWAEPPVVDEKKCIGCGF 357
>gi|333910150|ref|YP_004483883.1| dihydroorotate dehydrogenase [Methanotorris igneus Kol 5]
gi|333750739|gb|AEF95818.1| dihydroorotate dehydrogenase family protein [Methanotorris igneus
Kol 5]
Length = 304
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 170/329 (51%), Gaps = 30/329 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + G++ NP + +G G + +KR G GAV K+V L+ K + P
Sbjct: 2 LKTVICGIEFKNPVFLAAGVMGETGSALKRIAKNGAGAVCTKSVGLER-KEGHKNPTIVE 60
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
+ G + +G N + D +E + + LK + + +I SI Y K E
Sbjct: 61 VEGGFLNA-----MGLPNPGV--DEYVEEIERVRNDLKRM--NVRIIGSI---YGKDERE 108
Query: 167 ELI--DRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
I +++E +D IE+N SCPH GA +GQ+ L +V + +PV+AK
Sbjct: 109 FAIVAEKIEPY-VDMIELNISCPHA--GGGYGATIGQNPDLSYKVVESVKDAVKIPVFAK 165
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN+TDI A+ + +G++G++AINT+ M ID++ +P + GG S KA+
Sbjct: 166 LTPNVTDIKVIAKAVVEAGADGITAINTLGPGMVIDIEARKPILS----NKFGGMSGKAI 221
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ K++ + D + G+GG+ TG DA EFI+ GA+ VQV TGV GY
Sbjct: 222 KPIAV-------KIVYDLYETVDVPIIGVGGITTGKDALEFIMAGASAVQVGTGVYYRGY 274
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ +++CEE++ F+K N ++D G +
Sbjct: 275 DIFRKICEEMEVFLKEKNV-KLKDLVGCA 302
>gi|337284244|ref|YP_004623718.1| dihydroorotate dehydrogenase 1B [Pyrococcus yayanosii CH1]
gi|334900178|gb|AEH24446.1| dihydroorotate dehydrogenase 1B [Pyrococcus yayanosii CH1]
Length = 298
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 163/333 (48%), Gaps = 40/333 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + + GL+ NP ++ SG +++RA EG G VV K++ + K P
Sbjct: 2 LEVELFGLRFENPLILASGVVDMTPELLRRAHREGAGGVVTKSIGKEPRKGYE-NPTIVE 60
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM----EEYNK 162
L G + GWE L+EF K +P +I SI EE+
Sbjct: 61 LPYGLINAMGLPNPGWE-----------AFLEEFGGEKFDFP---VIVSIFGGTPEEFAF 106
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
L +++ E DA E+N SCPH + G +GQ ++ EV + PV
Sbjct: 107 -----LAEKLSEVA-DAFELNLSCPHA---KGYGMEIGQKDEMVYEVVKAVKDATDKPVI 157
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
AK+TPN+ DIT+ A ++ ++GVSAINT+ + ID+ +P + GGYS
Sbjct: 158 AKLTPNVADITKLGLAAEKAEADGVSAINTLKAT-AIDIYARKPILS----NRVGGYSGP 212
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
+ P+AL V +AK + D + GIGG+ T DA EF+L GA+ +Q+ TGV +
Sbjct: 213 GIKPVALRAVYDLAKAL-------DIPVIGIGGITTWQDAVEFLLAGASALQIGTGVALK 265
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
G+ + + + + +K +++ FSS+ D G ++E
Sbjct: 266 GFSVFREISDGIKRYLEEEGFSSVRDIVGLALE 298
>gi|148643104|ref|YP_001273617.1| dihydroorotate dehydrogenase 1B [Methanobrevibacter smithii ATCC
35061]
gi|148552121|gb|ABQ87249.1| dihydroorotate dehydrogenase, PyrD [Methanobrevibacter smithii ATCC
35061]
Length = 303
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 165/333 (49%), Gaps = 37/333 (11%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L V G++ NP ++ +G G+N + M G VV+K+ SL+ P YA
Sbjct: 2 LRTNVCGVEFRNPLMLAAGVMGSNASSMNWILKSGAAGVVSKSFSLEP------NPGYA- 54
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM----EEYNK 162
N + G G N +S+ E +E K++ + IASI EE++K
Sbjct: 55 -----NPTTVGVECGIINAIGLSNPGAENFKEELKRID--RKGNVSIASIYGATPEEFSK 107
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
L+ +E+ +D IE+N SCPH M GA++GQD L ++ A PV
Sbjct: 108 -----LVLEIEDY-VDMIELNISCPHAM--EGYGASIGQDANLTHKIVSAAKDSANKPVI 159
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
AK+TPN+TDI E A A +G++ ++ IN++ M I++ RP + GG S K
Sbjct: 160 AKLTPNVTDIVEIAVAAQDAGADALTLINSLGPGMKINIDVARPVLS----NKFGGMSGK 215
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ PIAL V ++ +++ D + G+GG+ D EF+ GA VQ+ T +M
Sbjct: 216 AIKPIALRNVYTV-------YDNVDIPIIGVGGISNFEDVVEFLFAGARAVQIGTSIMDE 268
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
G + ++ ++L++FM + SI++ G + E
Sbjct: 269 GVEVFGKINKDLEEFMNKKGYESIDEMIGLAHE 301
>gi|15679224|ref|NP_276341.1| dihydroorotate dehydrogenase 1B [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3914506|sp|O27281.1|PYRDB_METTH RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|2622323|gb|AAB85702.1| dihydroorotate oxidase [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 303
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 159/329 (48%), Gaps = 38/329 (11%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L ++ +++ NP ++ +G G+ + + R + G GAVV K+ SL P Y
Sbjct: 5 LETSICNIELRNPTILAAGVMGSMASSLNRIYRGGAGAVVTKSFSLRP------NPGY-- 56
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM----EEYNK 162
R G +I N +S+ +E +E K + P LIAS+ EE+
Sbjct: 57 -RNPTTVEVTGGVI---NAIGLSNPGVEAFREELKLVDEEVP---LIASVYGASPEEFAS 109
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
AA VEE D IE+N SCPH M GA++GQD L V + VP+
Sbjct: 110 AAAS-----VEEYA-DMIELNVSCPHAM--AGCGASIGQDPELTFRVVSAVKDAVDVPIS 161
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
K+TPN+TDI E A A +GS+ ++ IN++ M ID+KT RP + GG S
Sbjct: 162 TKLTPNVTDIVEIAGSAEEAGSDALTLINSLGPGMKIDIKTARPILS----NAFGGMSGP 217
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ P+A+ V + + D + G+GGV DA EF+ GA VQV T +M
Sbjct: 218 AIKPVAVRCVYDV-------YRSVDIPIMGVGGVRDFQDAVEFLFAGARAVQVGTAIMYD 270
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
G + ++C L+ FM FSS+++ G
Sbjct: 271 GPEVFMKICRGLEAFMMAEGFSSVDEMVG 299
>gi|437479727|ref|ZP_20768074.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|435219404|gb|ELO01766.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
Length = 162
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 96/162 (59%), Gaps = 9/162 (5%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+T G++ PNPF + S P G Y + +A+D GWG +V KT+ A V+PR+
Sbjct: 5 DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G IG++N+E I++ PLE L ++LK YPDK+LIASIM E N+ W
Sbjct: 63 HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLE 207
+EL VEE G D IE NFSCP M MG+ VGQ L+E
Sbjct: 117 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVE 157
>gi|15668835|ref|NP_247638.1| dihydroorotate dehydrogenase 1B [Methanocaldococcus jannaschii DSM
2661]
gi|2500041|sp|Q58070.1|PYRDB_METJA RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|1591367|gb|AAB98649.1| dihydroorotase dehydrogenase (pyrD) [Methanocaldococcus jannaschii
DSM 2661]
Length = 306
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 171/329 (51%), Gaps = 28/329 (8%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + G++ NP + SG G + +KR G GAV K++ L+ + P
Sbjct: 6 LKTNICGIEFKNPVFLASGIMGETGSALKRIAKGGAGAVTTKSIGLNPNPG-HKNPTIVE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
+ G + +G N + D LE + K +L + D +I SI + ++ +
Sbjct: 65 VYGGFLNA-----MGLPNPGV--DEYLEEIEKVRDELNRM--DVRIIGSIYGK-DEEEFA 114
Query: 167 ELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMT 226
E+ ++E +D IE+N SCPH + GA +GQ+ L +VC + +PV+AK+T
Sbjct: 115 EVAKKMERY-VDIIELNISCPHA---KGYGATIGQNPDLSYDVCKAVKKAVKIPVFAKLT 170
Query: 227 PNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHP 286
PN+TDI E A+ + +G +G+ AINT+ M ID++ +P + GG S KA+
Sbjct: 171 PNVTDIIEIAQAVVDAGVDGLVAINTVRG-MAIDIRAKKPILA----NKFGGLSGKAIKS 225
Query: 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGL 346
I + K++ + + D + G+GG+ +G DA E+++ GA+ VQ+ +GV GY +
Sbjct: 226 IGI-------KVVWDLYENFDVPIIGVGGIMSGEDAIEYMMAGASAVQIGSGVYYRGYDI 278
Query: 347 VKRLCEELKDFMKMHNFSSIEDFRGASIE 375
K++C+E+ F+K N ++E+ G + E
Sbjct: 279 FKKVCDEIISFLKEENL-TLEEIVGMAHE 306
>gi|336122242|ref|YP_004577017.1| dihydroorotate dehydrogenase [Methanothermococcus okinawensis IH1]
gi|334856763|gb|AEH07239.1| dihydroorotate dehydrogenase family protein [Methanothermococcus
okinawensis IH1]
Length = 304
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 165/335 (49%), Gaps = 38/335 (11%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAK------VINV 100
L + G+ NP + +G G + +KR G GA+ K+V ++ + V+ V
Sbjct: 2 LKTCIFGIDFKNPVFLAAGVMGETGSALKRMAKNGAGALCTKSVGIERREGHHNPTVVEV 61
Query: 101 TPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
+ N + E I + LE + + K++ D LI SI +
Sbjct: 62 NGGFLNAMGLPNPGVR---------EYIGE--LERVKDDLKRI-----DTKLIGSIYGKD 105
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
K E + + E ++ IE+N SCPH GA +GQ+ L +V + +P
Sbjct: 106 QKEFSE--VAEIIEPYVELIELNISCPHA--GGGYGAQIGQNPDLSYKVVSAVKDAVNIP 161
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
V AK+TPN+ DI E A+ + +G++G++AINT+ M ID++T +P + G + GG S
Sbjct: 162 VIAKLTPNVVDIKEIAKTVVEAGADGITAINTLGPGMVIDIETQKP---ILG-NRFGGMS 217
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
A+ PIA+ V I ++ D + G+GG+ TG D EF+L GA VQV TG+
Sbjct: 218 GPAIKPIAIKNVYDIYSVV-------DVPIIGVGGITTGYDVIEFMLAGAQAVQVGTGIY 270
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
GY + ++C+E+K F+K N ++D G + E
Sbjct: 271 YRGYDIFNKICDEMKLFLKDKNL-KLKDIIGGAHE 304
>gi|13542001|ref|NP_111689.1| dihydroorotate dehydrogenase 1B [Thermoplasma volcanium GSS1]
gi|30173362|sp|Q979G6.1|PYRDB_THEVO RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|14325433|dbj|BAB60337.1| dihydroorotate oxidase [Thermoplasma volcanium GSS1]
Length = 301
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 163/332 (49%), Gaps = 36/332 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDA--AKVINVTPR 103
D+S T+ G+++ NPF++ SG N MK + G AVV K++ + V
Sbjct: 3 DISTTLAGIKLVNPFMVASGILDENGYTMKELLERGAAAVVTKSIGISERDGYPTPVIVE 62
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
Y A G +S+ +E +E K + +I S+ YN
Sbjct: 63 YGDSLINAVG--------------LSNPGIENFGEEINIAKE--AKRPIIGSVFA-YNAE 105
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ +L ++EE G+DAIE+N SCPH + G VG D L+E++ I +K VPV+A
Sbjct: 106 EFTKLSVKMEEYGVDAIELNLSCPH---VKGFGLEVGSDPDLVEDIVNEIKSKVKVPVFA 162
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+++I E A+ A ++ + INT+ + M ID+ + P + GG S A
Sbjct: 163 KLSPNVSNIIEIAKAAEKA--DAYVLINTVKA-MAIDIYSRSPVLS----NLYGGLSGPA 215
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ P+ + V + K E + G+GG+ DA E+I+ GA+ VQ+ T + +G
Sbjct: 216 IKPVGIRYVYEVKKETGKE-------IIGVGGISNYKDAIEYIMAGASAVQIGTALYKYG 268
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
G+ + + +L+ FM F IE+ G +I+
Sbjct: 269 KGIFREMEWQLRTFMDEERFEKIEEMVGVAIK 300
>gi|320101037|ref|YP_004176629.1| dihydroorotate dehydrogenase family protein [Desulfurococcus
mucosus DSM 2162]
gi|319753389|gb|ADV65147.1| dihydroorotate dehydrogenase family protein [Desulfurococcus
mucosus DSM 2162]
Length = 403
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 180/377 (47%), Gaps = 45/377 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVI------- 98
DLS+ + GL++ NP + + P +Y M+ D G GAVVAKT+S+ A V
Sbjct: 3 DLSVELAGLKLKNPLMNAACPVSRDYEAMRELVDAGVGAVVAKTISVKPAIVPRPSMAAV 62
Query: 99 -----------NVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETML-KEFKQLKAL 146
+ P R+ +G+ + I N EL SD P E L +E+ +K
Sbjct: 63 DRGVVRANLLKTLKPGDVRITPVDSGNYR-FIYAVLNAELWSDIPAEHYLEREYPLVKKY 121
Query: 147 YPDK--ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCR 204
+K IASI Y L +VE+ G+ AIE FS + +G+D R
Sbjct: 122 CGEKGVAFIASI--GYTPEELSLLGPKVEKAGVQAIE--FSTHY----------IGRDYR 167
Query: 205 LLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTL 264
+ E + ++P++ K++P +I E + + G +G+ A NTI + ID++T
Sbjct: 168 PVVEAAKALRESVSIPIFPKLSPFTPNIPELVKELEKVGVDGIVATNTIGPALHIDVETG 227
Query: 265 RPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAE 324
P V G G S A+ P+AL A + ++ N K + G+GG+ G D E
Sbjct: 228 MP--IVGGPYGYGWMSGPALKPLAL------AVVSQAALNTK-LPVIGVGGISRGLDVIE 278
Query: 325 FILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELV 384
+ + GA+ VQ+CT ++ G G+ R+ +E+ +++ H ++SI D +GAS++Y V
Sbjct: 279 YFMAGASAVQICTAALVEGPGVFTRILKEVNEWLDRHGYASILDVKGASLKYLRPEPRRV 338
Query: 385 RMQQEAIQQRKAVRKGL 401
Q + ++K + G
Sbjct: 339 WAQPPVVDEKKCIGCGF 355
>gi|408382592|ref|ZP_11180135.1| dihydroorotate dehydrogenase 1B [Methanobacterium formicicum DSM
3637]
gi|407814668|gb|EKF85292.1| dihydroorotate dehydrogenase 1B [Methanobacterium formicicum DSM
3637]
Length = 301
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 161/325 (49%), Gaps = 30/325 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + + ++M NP V+ +G G+ + + A G GAVV K+ +L++ K P
Sbjct: 2 LEVEICHMKMRNPTVLAAGVLGSTSSSLNWAARSGAGAVVTKSFALESNKGYP-NPTTVE 60
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
+ G II N +S+ +E E ++L+ P IASI +
Sbjct: 61 VEGG--------II---NAIGLSNPGVEAFKGELEKLEGNVPH---IASIYGS-TPEDFA 105
Query: 167 ELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMT 226
L +VE+ +DA+E+N SCPH M GAA+GQD L + G + +PV K+T
Sbjct: 106 SLASQVEDL-VDALELNVSCPHAM--EGCGAAIGQDPDLTSNIVGAVKKSVKIPVIVKLT 162
Query: 227 PNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHP 286
PN+TDI E AR A +G++ ++ IN++ M ID +T P + GG S A+ P
Sbjct: 163 PNVTDIVEIARAAESAGADALTLINSLGPGMRIDPETAHPVLS----NRFGGMSGPAIKP 218
Query: 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGL 346
+AL + + + + + G+GG+ D EF+ GA+ VQ+ T VM HG +
Sbjct: 219 VAL-------RCVYQTYQNVKIPIMGVGGITNYQDVVEFLYAGASCVQIGTAVMYHGLEV 271
Query: 347 VKRLCEELKDFMKMHNFSSIEDFRG 371
+ + L+ FM+ N+ ++E+ G
Sbjct: 272 FQNINTGLEKFMRDKNYQTVEEMVG 296
>gi|296109015|ref|YP_003615964.1| dihydroorotate dehydrogenase family protein [methanocaldococcus
infernus ME]
gi|295433829|gb|ADG13000.1| dihydroorotate dehydrogenase family protein [Methanocaldococcus
infernus ME]
Length = 302
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 162/323 (50%), Gaps = 39/323 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + G++ NP + SG G + + R EG GAV K++ L P
Sbjct: 2 LGTEILGIKFKNPVFLASGIMGETGSSLVRMAKEGAGAVTTKSIGLKP------NP---- 51
Query: 107 LRAGANGSAKGQIIGWENIEL----ISDRPLETMLKEFKQLKALYPDKILIASIMEEYNK 162
G I+ E+ L + + ++ ++E ++ K +K+ + I Y K
Sbjct: 52 ------GHKNPTIVVLEDSLLNAMGLPNPGVDEYIEELREAKKRI-EKMGVRIIGSIYGK 104
Query: 163 AA--WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+ E+ ++E+ +D IE+N SCPH + GA +GQD L +VC + + VP
Sbjct: 105 DEDEFREVAKKIEDY-VDIIELNISCPHA---KGYGATIGQDPELSYKVCKAVKEEVKVP 160
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
V+AK+TPN+++I E A + + +G AINT+ M ID+K RP + GG S
Sbjct: 161 VFAKLTPNVSNILEIAEALVDAKVDGFVAINTVRG-MKIDIKAKRPILS----NKFGGLS 215
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
KA+ PI + K++ + + D + G+GG+ TG DA E+++ GA+ VQV + V
Sbjct: 216 GKAIKPIGV-------KIVYDLYENFDKPIIGVGGIFTGEDAIEYMMAGASAVQVGSAVY 268
Query: 341 MHGYGLVKRLCEELKDFMKMHNF 363
GY + K++C+E+K+F+ N
Sbjct: 269 FRGYDVFKKICDEIKEFLIEENL 291
>gi|150403356|ref|YP_001330650.1| dihydroorotate dehydrogenase 1B [Methanococcus maripaludis C7]
gi|150034386|gb|ABR66499.1| dihydroorotate dehydrogenase family protein [Methanococcus
maripaludis C7]
Length = 304
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 155/306 (50%), Gaps = 27/306 (8%)
Query: 54 LQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAG-AN 112
++ NP + +G G + +KR G GAV K+V ++ N P + G N
Sbjct: 9 IEFKNPVFLAAGVMGETGSALKRMAKNGAGAVCTKSVGIEKKPGHN-NPTMVEVEGGFLN 67
Query: 113 GSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRV 172
E +E I E + K + ++Y + E+ KAA E ++ V
Sbjct: 68 AMGLPNPGAEEYVEEIGRIKEEMKRMDVKIIGSIYGKNDV------EFQKAA-EIIVPHV 120
Query: 173 EETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDI 232
D +E+N SCPH G+++GQD L + V + + +PV AK+TPN+TDI
Sbjct: 121 -----DVLELNISCPHA--GGGYGSSIGQDPCLCKNVVSAVKDVSDIPVIAKLTPNVTDI 173
Query: 233 TEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKV 292
E A + +G++G+ AINT+ M ID+++ P + G GG S KA+ PIA+ V
Sbjct: 174 KEIANAVVNAGADGIVAINTLGPGMVIDIESGVP---ILGNKV-GGMSGKAIKPIAVKNV 229
Query: 293 MSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352
I F+ D + G+GGV TG DA EF++ GA+ VQV TGV GY + +++ E
Sbjct: 230 YDI-------FSAVDVPVIGVGGVTTGADAIEFMMAGASAVQVGTGVYYRGYDIFQKINE 282
Query: 353 ELKDFM 358
E+++++
Sbjct: 283 EIEEYL 288
>gi|409418681|ref|ZP_11258657.1| dihydropyrimidine dehydrogenase subunit B, partial [Pseudomonas sp.
HYS]
Length = 145
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 92/148 (62%), Gaps = 6/148 (4%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLSI G++ PNPF + S PP + RA+ GWG VV KT+ D A V NV+ RY+
Sbjct: 3 DLSIEFAGIKAPNPFWLASAPPTDKAYNVVRAYQAGWGGVVWKTLGEDPAAV-NVSSRYS 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
A+ +++G NIELI+DR LE L+E Q+K +PD+ LI S+M +A+W
Sbjct: 62 -----AHYGVNREVMGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEASW 116
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPER 193
+ ++ VE TG D IE+NF CPHGMPER
Sbjct: 117 KAILPLVEATGADGIELNFGCPHGMPER 144
>gi|240102413|ref|YP_002958722.1| dihydroorotate dehydrogenase 1B [Thermococcus gammatolerans EJ3]
gi|239909967|gb|ACS32858.1| Dihydroorotase dehydrogenase (pyrD) [Thermococcus gammatolerans
EJ3]
Length = 300
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 40/333 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + + G++ NP ++ SG RA +EG G VV K++ ++ K + P
Sbjct: 4 LEVKLFGIRFENPLILASGINDKVPEQWIRAHEEGAGGVVTKSIGIEPRKGYD-NPTIVE 62
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM----EEYNK 162
L G + GW+ + ++ D LI SI EE+
Sbjct: 63 LPCGLINAMGLPNPGWKGF--------------LEMVEGYTFDFPLIVSIFGGTPEEFAF 108
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
A E+L D DA E+N SCPH + G +GQ+ + EV + PV
Sbjct: 109 LA-EKLSDVA-----DAFELNLSCPHA---KGYGMEIGQNPENVYEVVKAVKDATDRPVI 159
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
AK+TPNI DIT+ A ++G++ VSAINT+ ++ ID+ RP + GGYS
Sbjct: 160 AKLTPNIDDITKLGLAAEKAGADAVSAINTLKAI-AIDIYARRPILS----NRVGGYSGP 214
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
V P+AL V +AK++ D + GIGG+ T DA EF+L GA+ +Q+ T V +
Sbjct: 215 GVKPVALRAVYDLAKVL-------DIPVIGIGGITTWQDAVEFLLAGASALQIGTAVSLR 267
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
G+ + + + E +K +++ FSS+ + G ++E
Sbjct: 268 GWKVFREINEGIKAYLESEGFSSVSEIVGLALE 300
>gi|333988319|ref|YP_004520926.1| dihydroorotate dehydrogenase [Methanobacterium sp. SWAN-1]
gi|333826463|gb|AEG19125.1| dihydroorotate dehydrogenase family protein [Methanobacterium sp.
SWAN-1]
Length = 300
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 150/320 (46%), Gaps = 30/320 (9%)
Query: 54 LQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANG 113
++M NP ++ +G G+ + A G GAVV K+ L K V P + G
Sbjct: 9 IKMKNPTMLAAGVLGSTAASLNWAARSGAGAVVTKSFGLVPNKGY-VNPTTVEVTGGVIN 67
Query: 114 SAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVE 173
+ G EN E E K+L P +ASI N + + R++
Sbjct: 68 AIGLSNPGVENFE-----------GELKKLDGSVP---AVASIYGA-NPHEFSVIAGRID 112
Query: 174 ETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDIT 233
+DA+E+N SCPH M GAA+GQD L E+ + PV+ K+TPN+TDI
Sbjct: 113 GK-VDAVELNVSCPHAM--GGCGAAIGQDPDLTAEIVKAVKKNVRCPVFVKLTPNVTDIV 169
Query: 234 EPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVM 293
E A A ++G + ++ IN++ M IDL+T +P + GG S AV P+AL V
Sbjct: 170 EVAVAAEKAGCDALTMINSLGPGMRIDLETAKPILS----NRFGGMSGPAVKPVALRCVF 225
Query: 294 SIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEE 353
+ + + + G+GG+ D EF+ GA VQV T VM HG + LC
Sbjct: 226 DV-------YEAVNVPIIGVGGITDYKDVVEFLYAGARVVQVGTAVMYHGLDIFADLCTG 278
Query: 354 LKDFMKMHNFSSIEDFRGAS 373
L+ F+ + S+E+ G S
Sbjct: 279 LEKFIIEKGYDSVEEMVGLS 298
>gi|410720209|ref|ZP_11359576.1| dihydroorotate dehydrogenase family protein [Methanobacterium sp.
Maddingley MBC34]
gi|410601423|gb|EKQ55936.1| dihydroorotate dehydrogenase family protein [Methanobacterium sp.
Maddingley MBC34]
Length = 301
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 157/320 (49%), Gaps = 34/320 (10%)
Query: 54 LQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANG 113
++M NP V+ +G G+ + + G GAVV K+ +++ K P + G
Sbjct: 9 MKMRNPTVLAAGVLGSTSSSLNWVARSGAGAVVTKSFAVEPNKGYP-NPTTVEVEGGIIN 67
Query: 114 SAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDR 171
+ IG N +E+ LE + Q+ ++Y S E+++ A +
Sbjct: 68 A-----IGLSNPGVEVFKGE-LEKLEGNVPQIASVY------GSTPEDFSMVASQV---- 111
Query: 172 VEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITD 231
E +DA+E+N SCPH M GA++GQD L + + + PV AK+TPN+TD
Sbjct: 112 --ENLVDALELNVSCPHAM--EGCGASIGQDPDLTRSIVKTVKSSVDTPVIAKLTPNVTD 167
Query: 232 ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGK 291
I E A+ A + G++ ++ IN++ M IDL+T P + GG S A+ PIAL
Sbjct: 168 IVEIAQAAEQGGADALTLINSLGPGMRIDLETAHPILS----NRFGGMSGPAIKPIALRC 223
Query: 292 VMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351
V + + +K + G+GG+ D EF+ GA+ VQ+ T VM HG + + +
Sbjct: 224 VYQVHQNVK-------IPIMGVGGITNYRDVVEFLYAGASCVQIGTAVMYHGLEVFREIS 276
Query: 352 EELKDFMKMHNFSSIEDFRG 371
L+ FMK N+ ++E+ G
Sbjct: 277 TGLEKFMKEKNYQTVEEMVG 296
>gi|150400165|ref|YP_001323932.1| dihydroorotate dehydrogenase 1B [Methanococcus vannielii SB]
gi|150012868|gb|ABR55320.1| dihydroorotate dehydrogenase family protein [Methanococcus
vannielii SB]
Length = 304
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 164/324 (50%), Gaps = 34/324 (10%)
Query: 54 LQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANG 113
++ NP + +G G + +KR G GAV K+V ++ K + P + G
Sbjct: 9 IEFKNPVFLAAGVMGETGSALKRMAKNGAGAVCTKSVGIEK-KEGHKNPTMVEVEGGFLN 67
Query: 114 SAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM----EEYNKAAWEELI 169
+ G E L LE + E K++ +I SI E+ K A E LI
Sbjct: 68 AMGLPNPGVEEYIL----ELERIKSEMKRMNVK-----IIGSIYGKNETEFQKVA-ENLI 117
Query: 170 DRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNI 229
V D +E+N SCPH G+++GQD L + V + + + +PV K+TPN+
Sbjct: 118 PHV-----DVLELNISCPHA--GGGYGSSIGQDKCLSKNVVSAVKSVSDIPVIVKLTPNV 170
Query: 230 TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL 289
TDI E + + +G++G+ AINT+ M ID+++ +P + GG S KA+ PIA+
Sbjct: 171 TDIKEISNSVVNAGADGIVAINTLGPGMVIDIESKKPVLA----NKFGGMSGKAIKPIAV 226
Query: 290 GKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKR 349
V I + + + G+GG+ TG DA EF++ GA+ VQV TGV GY + ++
Sbjct: 227 KNVYDICSTV-------EVPVIGVGGITTGYDAIEFMMAGASGVQVGTGVYYRGYDIFQK 279
Query: 350 LCEELKDFMKMHNFSSIEDFRGAS 373
+ +E+++F+K + +++D G S
Sbjct: 280 INQEIEEFLKNRDL-NLKDIIGIS 302
>gi|409096793|ref|ZP_11216817.1| dihydroorotate dehydrogenase 1B [Thermococcus zilligii AN1]
Length = 300
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 157/331 (47%), Gaps = 36/331 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + + G++ NP ++ SG RA +EG G VV K++ ++ K + P
Sbjct: 4 LEVELFGIRFENPLILASGINDKVPEQWIRAHEEGAGGVVTKSIGIEPRKGYD-NPTIVE 62
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
L G + GW+ + ++ D LI SI E
Sbjct: 63 LPYGLINAMGLPNPGWKGF--------------LEMVEGYTFDFPLIVSIF----GGTPE 104
Query: 167 ELIDRVEETG--IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
E E+ G DA E+N SCPH + G +GQ + EV + PV AK
Sbjct: 105 EFAFLAEKLGDVADAFELNLSCPHA---KGYGMEIGQKPESVYEVVKAVKDATDRPVIAK 161
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN DIT+ A R+G++GVSAINT+ ++ ID+ RP + GGYS V
Sbjct: 162 LTPNTDDITKLGLAAERAGADGVSAINTLKAI-AIDIYAKRPILS----NRVGGYSGPGV 216
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
P+AL V +A+ + D + GIGG+ T DA EF+L GA+ +Q+ T V + G+
Sbjct: 217 KPVALRAVYDLARAL-------DIPVIGIGGITTWQDAVEFLLAGASALQIGTAVSLRGW 269
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
+ + + E ++ ++K FSS++D G +++
Sbjct: 270 KVFREINEGIERYLKEEGFSSVKDIVGLALK 300
>gi|57642195|ref|YP_184673.1| dihydroorotate dehydrogenase 1B [Thermococcus kodakarensis KOD1]
gi|73913697|sp|Q5JHR7.1|PYRDB_PYRKO RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|57160519|dbj|BAD86449.1| dihydroorotate dehydrogenase [Thermococcus kodakarensis KOD1]
Length = 302
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 161/334 (48%), Gaps = 42/334 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
LSI ++GL+ NP ++ SG RA +EG G VV K++ ++ K + P
Sbjct: 6 LSINLSGLEFENPLILASGINDKVPEQWIRAHEEGAGGVVTKSIGIEPRKGYD-NPTIVE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYP-DKILIASIM----EEYN 161
L G + GW K F ++ Y D LI SI EE+
Sbjct: 65 LPYGLINAMGLPNPGW---------------KGFLEMVEGYSFDFPLIVSIFGGTPEEFA 109
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
L +++ E DA E+N SCPH + G +GQ + V + PV
Sbjct: 110 F-----LAEKLSEVA-DAFELNLSCPHA---KGYGMEIGQKPENVYAVVKAVKDATDKPV 160
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
AK+TPNI DIT+ A +G++ VSAINT+ ++ ID+ +P + GGYS
Sbjct: 161 IAKLTPNIDDITKLGLAAENAGADAVSAINTLKAI-AIDIYARKPILS----NKVGGYSG 215
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
V P+AL V +A+ + D + GIGG+ T DA EF+L GA+ +Q+ T V +
Sbjct: 216 PGVKPVALRAVYDLARTL-------DIPVIGIGGITTWQDAVEFLLAGASALQIGTAVSL 268
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
G+ + + + E ++ +++ FSS+E+ G ++E
Sbjct: 269 RGWKVFREINEGIERYLREEGFSSVEEIVGLALE 302
>gi|325958065|ref|YP_004289531.1| dihydroorotate dehydrogenase family protein [Methanobacterium sp.
AL-21]
gi|325329497|gb|ADZ08559.1| dihydroorotate dehydrogenase family protein [Methanobacterium sp.
AL-21]
Length = 300
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 159/327 (48%), Gaps = 30/327 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
+ I + G++M NP ++ +G G+ + + A G GAVV K+ L++ K + P
Sbjct: 1 MEIELCGIKMKNPTMLAAGILGSTASSLNWAAKSGAGAVVTKSFGLNSNKGYS-NPTTVE 59
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
+ G + G EN ++ E K+L P IASI N +
Sbjct: 60 VTGGVINAIGLSNPGVENFQM-----------ELKKLDGSVP---AIASIYGA-NPDEFS 104
Query: 167 ELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMT 226
++ ++E +DAIE+N SCPH M GAA+GQD L + + VP+ K+T
Sbjct: 105 KIATHIQED-VDAIELNVSCPHAM--GGCGAAIGQDPLLTSSIVSAVKESVNVPILVKLT 161
Query: 227 PNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHP 286
PN+TDI E A A +G++ ++ IN++ M ID+ T +P + GG S A+ P
Sbjct: 162 PNVTDIVEVAVSAQDAGADALTLINSLGPGMKIDITTGKPILS----NRFGGMSGPAIKP 217
Query: 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGL 346
+A+ V + F+ + + G+GG+ D EFI GA VQ+ T +M G +
Sbjct: 218 VAVRCVYDV-------FDAVEIPVVGVGGIRNYEDVLEFIYAGATCVQIGTSIMYEGMEI 270
Query: 347 VKRLCEELKDFMKMHNFSSIEDFRGAS 373
++ +L+ FM+ ++ +E+ G S
Sbjct: 271 FGKVVNDLEVFMEKMGYTKLEEMVGIS 297
>gi|304315343|ref|YP_003850490.1| dihydroorotate dehydrogenase [Methanothermobacter marburgensis str.
Marburg]
gi|302588802|gb|ADL59177.1| predicted dihydroorotate dehydrogenase [Methanothermobacter
marburgensis str. Marburg]
Length = 302
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 158/326 (48%), Gaps = 38/326 (11%)
Query: 54 LQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANG 113
+++ NP ++ +G G+ + + R + G GAVV K+ SL+ + P + G
Sbjct: 9 IELRNPTMLAAGVMGSMASSLNRVYRAGAGAVVTKSFSLEPNEGYK-NPTTVEVTGGIIN 67
Query: 114 SAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM----EEYNKAAWEELI 169
+ IG N P KE +L+ + D LIASI EE+ + A
Sbjct: 68 A-----IGLSN-------PGVEAFKE--ELRGVDDDVPLIASIYGSSPEEFARVAAS--- 110
Query: 170 DRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNI 229
VE+ +D IE+N SCPH M GA++GQD L V + VPV K+TPN+
Sbjct: 111 --VEDY-VDMIELNVSCPHAM--AGCGASIGQDAGLTFRVVSAVKDAVGVPVSTKLTPNV 165
Query: 230 TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL 289
TDI E A+ A +GS+ ++ IN++ M ID+KT +P + GG S A+ P+A+
Sbjct: 166 TDIVEIAKSAEDAGSDALTLINSLGPGMKIDIKTAKPVLS----NAFGGMSGPAIKPVAV 221
Query: 290 GKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKR 349
V + + + + G GGV DA EF+ GA VQV T +M G +
Sbjct: 222 RCVYDV-------YRSVEIPIIGAGGVRDFRDAVEFLFAGAVAVQVGTAIMYDGPEIFMG 274
Query: 350 LCEELKDFMKMHNFSSIEDFRGASIE 375
+C L+ FM FSS+++ G + E
Sbjct: 275 ICRGLERFMIEEGFSSVDEMVGLAHE 300
>gi|134046225|ref|YP_001097710.1| dihydroorotate dehydrogenase 1B [Methanococcus maripaludis C5]
gi|132663850|gb|ABO35496.1| dihydroorotate oxidase B, catalytic subunit [Methanococcus
maripaludis C5]
Length = 304
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 158/318 (49%), Gaps = 51/318 (16%)
Query: 54 LQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANG 113
++ NP + +G G + +KR G GAV K+V ++ N P + G
Sbjct: 9 IEFKNPVFLAAGVMGETGSALKRMAKNGAGAVCTKSVGIEKKPGHN-NPTMVEVEGGFLN 67
Query: 114 SAKGQIIGWEN---------IELISDRPLETMLKEFKQLKALYPDKILIASIM----EEY 160
+ +G N IE I D E K++ D +I SI E+
Sbjct: 68 A-----MGLPNPGADEYAGEIERIKD--------EMKRM-----DVKIIGSIYGKNDSEF 109
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
KAA E+I +D +E+N SCPH G+++GQD L + V +N + +P
Sbjct: 110 QKAA--EIIGNY----VDVLELNISCPHA--GGGYGSSIGQDPCLCKNVVSAVNDVSDIP 161
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
V AK+TPN+TDI E A + +G++G+ AINT+ M ID+++ P + G GG S
Sbjct: 162 VIAKLTPNVTDIKEIANAVINAGADGIVAINTLGPGMVIDIESGVP---ILGNKV-GGMS 217
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
KA+ PIA+ V I + D + G+GG+ TG DA EF++ GA+ VQV TGV
Sbjct: 218 GKAIKPIAVKNVYDICSAV-------DVPVIGVGGITTGADAIEFMMAGASAVQVGTGVY 270
Query: 341 MHGYGLVKRLCEELKDFM 358
GY + +++ E+++++
Sbjct: 271 YRGYDIFQKINNEIEEYL 288
>gi|302391251|ref|YP_003827071.1| dihydroorotate dehydrogenase family protein [Acetohalobium
arabaticum DSM 5501]
gi|302203328|gb|ADL12006.1| dihydroorotate dehydrogenase family protein [Acetohalobium
arabaticum DSM 5501]
Length = 409
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 168/354 (47%), Gaps = 36/354 (10%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
+PDLS V G++ NP V+ S P + M++ + G G +VAKT S + V+PR
Sbjct: 2 KPDLSTEVCGVEFKNPIVVASATPTHDAEAMRKCVEAGAGGLVAKTFSPEPLTKEYVSPR 61
Query: 104 YARLRAGANGSAKGQIIGWENI------ELISDRPLETMLKEFKQLKALY---PDKILIA 154
+ L GW ++ E ++ + +K+ ++ A Y D LI
Sbjct: 62 FTVLHKE----------GWPDVYSNYSCEFLATFATDEWMKQMEE-AAEYCHEHDVRLIG 110
Query: 155 SIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMP-ERKMGAAVGQDCRLLEEVCGWI 213
SI +W++L R+E TGID +E+NF CPH + K G +G EV +
Sbjct: 111 SI-SGTTMESWQDLAQRIEATGIDMLELNFGCPHPRDLDYKSGQVLGSSPEAAAEVTEAV 169
Query: 214 NAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGY 273
+PV+ K+TP E + +G+ GV+AIN + ID++ RP +
Sbjct: 170 VEVVDIPVFIKVTPEAVSPVEVTKRVTEAGAAGVTAINR-YPALDIDIEDGRP----LLH 224
Query: 274 STPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTV 333
ST G + PI L + I+K + + +S G+ T D + I++GA+TV
Sbjct: 225 STYAGVGGPWMRPITLKWLSKISKEVGA-------PISATNGISTWKDIVKCIMVGASTV 277
Query: 334 QVCTGVM--MHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
Q CT +M + YG ++ E L+D+M+ + S+++ RG ++ T E+ R
Sbjct: 278 QTCTALMYGQNQYGKIEDFIEGLEDYMEDKGYDSLDELRGITLPQIKTWDEVDR 331
>gi|332157745|ref|YP_004423024.1| dihydroorotate dehydrogenase 1B [Pyrococcus sp. NA2]
gi|331033208|gb|AEC51020.1| dihydroorotate dehydrogenase 1B [Pyrococcus sp. NA2]
Length = 299
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 32/329 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L I + GL+ NP ++ SG +++RA EG G VV K++ ++ K P
Sbjct: 2 LKIELLGLEFENPLILASGVVDMTPELLRRAHREGAGGVVTKSIGIEPRKGYE-NPTIVE 60
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
L G + GWE L+EFK K +P +I S+ N +
Sbjct: 61 LPYGLINAMGLPNPGWE-----------AFLEEFKGQKFEFP---VIVSVFGG-NPDEFA 105
Query: 167 ELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMT 226
L++R++E DA E+N SCPH + G +GQD + + P+ AK+T
Sbjct: 106 FLVERLDEVA-DAFELNLSCPHA---KGYGMEIGQDPENVYRIVKVTKEITDKPIIAKLT 161
Query: 227 PNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHP 286
PN DI + A R+ ++ VSAINT+ ++ ID+ RP + GGYS + P
Sbjct: 162 PNTNDIVKLGLAAERAEADAVSAINTVKAI-AIDIYAKRPILS----NKVGGYSGPGIKP 216
Query: 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGL 346
IAL V +AK + D + GIGG+ + DA EF L GA+ VQ+ T V + G +
Sbjct: 217 IALRAVYDLAKSL-------DIPIIGIGGITSWEDAVEFFLAGASAVQIGTAVYLKGLSV 269
Query: 347 VKRLCEELKDFMKMHNFSSIEDFRGASIE 375
K + L+++++ FSSI + G +++
Sbjct: 270 FKEIANGLENYLRTEGFSSIREIIGLALK 298
>gi|48477247|ref|YP_022953.1| dihydroorotate dehydrogenase 1B [Picrophilus torridus DSM 9790]
gi|48429895|gb|AAT42760.1| dihydroorotate dehydrogenase [Picrophilus torridus DSM 9790]
Length = 297
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 157/329 (47%), Gaps = 34/329 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S + + + NP ++ SG N MK+ + G AVV K++ +D + Y
Sbjct: 2 DISCKIASINLKNPLILASGILDENAYTMKKILEHGASAVVTKSIGMDERRGFETPVIYD 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
N IG +S+ ++ E + L+ +I SI +
Sbjct: 62 EYPYFINA------IG------LSNPGIDAFSGEMEILRG----SNVIGSIFGT-GPEDF 104
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
L R+E+ G A+E+N SCPH + G VG D L+E + + +K +PV+AK+
Sbjct: 105 SYLAKRMEDYGAIAVELNLSCPH---VKGFGLEVGSDSGLVESIVSEVKSKVNIPVFAKL 161
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
+PN DI E AR A + ++ + INT + M ID+ P + GG S +++
Sbjct: 162 SPNTHDILEEARAAEK--ADALVLINT-LKAMKIDINARMPVLS----NIYGGLSGRSIK 214
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
P+ + V +++ +K + G+GG+E DA E+I+ GA+ V++ TG+ HG
Sbjct: 215 PVGIRYVYEVSRELK-------IPVIGVGGIENYEDAIEYIMAGASAVEIGTGIYRHGKK 267
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+ + + +FMK +N S+ + RG +I
Sbjct: 268 IFSEITNGILNFMKENNIESLSEIRGCAI 296
>gi|389852823|ref|YP_006355057.1| dihydroorotate dehydrogenase 1B [Pyrococcus sp. ST04]
gi|388250129|gb|AFK22982.1| dihydroorotate dehydrogenase 1B [Pyrococcus sp. ST04]
Length = 276
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 149/303 (49%), Gaps = 32/303 (10%)
Query: 73 VMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRP 132
+++RA EG G VV K++ L K P L G + GWE
Sbjct: 5 LLRRAHREGAGGVVTKSIGLKPRKGYE-NPTIVELPYGLINAMGLPNPGWE--------- 54
Query: 133 LETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPE 192
L+EFK K +P LI SI + L +++ E DA E+N SCPH
Sbjct: 55 --AFLEEFKGEKFDFP---LIVSIFAG-TPEEFAFLAEKLTEIA-DAFELNLSCPHA--- 104
Query: 193 RKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINT 252
+ G +GQ + EV + PV AK+TPN DIT+ A ++G++ VSAINT
Sbjct: 105 KGYGMEIGQRPENVYEVVRKVKDATDKPVIAKLTPNTDDITKLGLAAEKAGADAVSAINT 164
Query: 253 IMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSG 312
+ ++ ID+ RP + GGYS + PIAL + +A+++ + + G
Sbjct: 165 VKAI-AIDIYARRPILS----NKVGGYSGPGIKPIALRAIYDLARVL-------EIPVIG 212
Query: 313 IGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
IGG+ T DA EF+L GA+ +Q+ T V + G+ + + + E +K ++K F S+++ G
Sbjct: 213 IGGITTWQDAVEFLLAGASALQIGTAVYLRGFSVFREISEGIKRYLKEEGFRSVKEIIGL 272
Query: 373 SIE 375
+++
Sbjct: 273 ALD 275
>gi|406887639|gb|EKD34362.1| hypothetical protein ACD_75C02371G0002 [uncultured bacterium]
Length = 317
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 161/328 (49%), Gaps = 31/328 (9%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
PDL + + L++ NP + SG G + GAV+ K +SL +V N PR
Sbjct: 12 PDLRVNIGSLEIANPVMTASGTFGYAREFEQLTNLHSLGAVIVKGISLHP-RVGNPPPRI 70
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
G + IG +N+ + DR + +K L D +I +I+ + + A
Sbjct: 71 VETACGMLNA-----IGLQNVGV--DRFITEKMKYLAGL-----DVPVIVNILGD-SLAE 117
Query: 165 WEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E+ +R++ G+ IEVN SCP+ +K G A G D + V + KA VPV
Sbjct: 118 YAEISERLQGVPGVAGIEVNISCPN---VKKGGVAFGTDPAMAAAVTSAVKQKADVPVMI 174
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+TDIT AR +G++ +S INT++ M IDLKT RP + GG S A
Sbjct: 175 KLSPNVTDITLIARAVEDAGADSISLINTLIG-MAIDLKTRRPALA----NIIGGLSGPA 229
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ P+AL V +A+ + + GIGG+E+ DA EF+L GA VQ+ T ++
Sbjct: 230 IKPVALRMVYQVARAVS-------IPVIGIGGIESTEDALEFMLAGATAVQIGTANFINP 282
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ + + E + ++ + SI G
Sbjct: 283 R-VTEEIVEGMYEYARAEKLISIRSIIG 309
>gi|390938008|ref|YP_006401746.1| dihydroorotate dehydrogenase family protein [Desulfurococcus
fermentans DSM 16532]
gi|390191115|gb|AFL66171.1| dihydroorotate dehydrogenase family protein [Desulfurococcus
fermentans DSM 16532]
Length = 403
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 175/377 (46%), Gaps = 45/377 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVI------- 98
DLS+ + GL++ NP + + P + MK D G GAVVAKT+S+ A V
Sbjct: 3 DLSVELAGLKLRNPIMNAACPVSRDADAMKMLIDNGIGAVVAKTISVKPAIVPRPSMAAV 62
Query: 99 -----------NVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETML-KEFKQLKAL 146
+ P R+ +G+ + I N EL SD P E L +E+ +K+
Sbjct: 63 DRGLVRAHLLKTLKPGDIRITPVDSGNHR-FIYAVLNAELWSDIPAEHYLEREYPLVKSY 121
Query: 147 YPDK--ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCR 204
+K + IASI Y L +VE+ G AIE FS + +G+D R
Sbjct: 122 CEEKGAVFIASI--GYTPEELSLLGPKVEKAGAQAIE--FSTHY----------IGRDYR 167
Query: 205 LLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTL 264
+ E + +P++ K++P +I E + + G +G+ A NTI + ID++T
Sbjct: 168 PVIEAAKALRESVDIPIFPKLSPFTPNIPELVKELEKVGVDGIVATNTIGPALHIDVETG 227
Query: 265 RPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAE 324
P V G G S A+ P+AL V +A N K + G+GG+ G D E
Sbjct: 228 LP--IVGGPYGYGWMSGPALKPLALAVVSQVA------LNTK-LPVIGVGGISRGVDVIE 278
Query: 325 FILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELV 384
+ + GA+ VQ+CT ++ G + R+ E+ +++ H ++SI D +G +++Y V
Sbjct: 279 YFMAGASAVQICTAALIEGPQVFARIIREVNEWLDRHGYTSILDVKGLALKYLKPEPRRV 338
Query: 385 RMQQEAIQQRKAVRKGL 401
Q + ++K + G
Sbjct: 339 WAQPPVVDEKKCIGCGF 355
>gi|340623627|ref|YP_004742080.1| dihydroorotate dehydrogenase 1B [Methanococcus maripaludis X1]
gi|339903895|gb|AEK19337.1| dihydroorotate dehydrogenase 1B [Methanococcus maripaludis X1]
Length = 304
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 158/312 (50%), Gaps = 39/312 (12%)
Query: 54 LQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANG 113
++ NP + +G G + +KR G GAV K+V ++ N P + G
Sbjct: 9 IEFKNPVFLAAGVMGETGSALKRMAKNGAGAVCTKSVGIEKKPGHN-NPTMVEVEGGFLN 67
Query: 114 SAKGQIIGWENI---ELISDRPLETMLKEFKQLKALYPDKILIASIM----EEYNKAAWE 166
+ +G N E + + +E + E K++ +I SI E+ KAA
Sbjct: 68 A-----MGLPNPGADEYVGE--IERIKDEMKRMNVK-----IIGSIYGKNDSEFQKAA-- 113
Query: 167 ELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMT 226
E+I +D +E+N SCPH G+++GQD L + V + + +PV AK+T
Sbjct: 114 EIIGNY----VDVLELNISCPHA--GGGYGSSIGQDPYLCKNVVSAVKDVSDIPVIAKLT 167
Query: 227 PNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHP 286
PN+TDI E A + +G++G+ AINT+ M ID+++ P + G GG S KAV P
Sbjct: 168 PNVTDIKEIANAVVNAGADGIVAINTLGPGMVIDIESGVP---ILGNRV-GGMSGKAVKP 223
Query: 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGL 346
IA+ V I + D + G+GG+ TG DA EF++ GA+ VQV TGV GY +
Sbjct: 224 IAVKNVYDICSAV-------DVPVIGVGGITTGADAIEFMMAGASAVQVGTGVYYRGYDI 276
Query: 347 VKRLCEELKDFM 358
+++ E+++++
Sbjct: 277 FQKINNEIEEYL 288
>gi|218883496|ref|YP_002427878.1| dihydroorotate dehydrogenase family protein [Desulfurococcus
kamchatkensis 1221n]
gi|218765112|gb|ACL10511.1| dihydroorotate dehydrogenase family protein [Desulfurococcus
kamchatkensis 1221n]
Length = 407
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 175/377 (46%), Gaps = 45/377 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVI------- 98
DLS+ + GL++ NP + + P + M+ D G GAVVAKT+S+ A V
Sbjct: 7 DLSVELAGLKLRNPIMNAACPVSRDADAMRMLIDNGVGAVVAKTISVKPAIVPRPSMAAV 66
Query: 99 -----------NVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETML-KEFKQLKAL 146
+ P R+ +G+ + I N EL SD P E L +E+ +K+
Sbjct: 67 DRGLVRAHLLKTLKPGDVRITPVDSGNHR-FIYAVLNAELWSDIPAEHYLEREYPLVKSY 125
Query: 147 YPDK--ILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCR 204
+K + IASI Y L +VE+ G+ AIE FS + +G+D R
Sbjct: 126 CEEKGAVFIASI--GYTPEELSLLGPKVEKAGVQAIE--FSTHY----------IGRDYR 171
Query: 205 LLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTL 264
+ E + +P++ K++P +I E + + G +G+ A NTI + ID++T
Sbjct: 172 PVIEAAKALRESVDIPIFPKLSPFTPNIPELVKELEKVGVDGIVATNTIGPALHIDVETG 231
Query: 265 RPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAE 324
P V G G S A+ P+AL V +A N K + G+GG+ G D E
Sbjct: 232 LP--IVGGPYGYGWMSGPALKPLALAVVSQVA------LNTK-LPVIGVGGISRGVDVIE 282
Query: 325 FILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELV 384
+ + GA+ VQ+CT ++ G R+ E+ +++ H ++SI D +G +++Y V
Sbjct: 283 YFMAGASAVQICTAALIEGPQAFARIIREVNEWLDRHGYTSILDVKGLALKYLKPEPRRV 342
Query: 385 RMQQEAIQQRKAVRKGL 401
Q + ++K + G
Sbjct: 343 WAQPPVVDEKKCIGCGF 359
>gi|296242044|ref|YP_003649531.1| dihydroorotate dehydrogenase family protein [Thermosphaera
aggregans DSM 11486]
gi|296094628|gb|ADG90579.1| dihydroorotate dehydrogenase family protein [Thermosphaera
aggregans DSM 11486]
Length = 403
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 172/374 (45%), Gaps = 39/374 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT---- 101
DLSI + G++M NP + + P + MK D G G VVAKT+S+ A V +
Sbjct: 3 DLSIEIAGIKMKNPIMNAACPISRDAETMKLLIDNGVGGVVAKTISVKPAIVPRPSMAVV 62
Query: 102 ----PRYARLRAGANGSAKGQ---------IIGWENIELISDRPLETML-KEFKQLKALY 147
R+ L+ G + I + N EL SD P E L +E+ +K
Sbjct: 63 DRGMGRFYYLKTLKPGDVRITPVDAGNHRFIHAFLNAELWSDIPAEHYLEREYPNVKNYC 122
Query: 148 PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLE 207
++ + + Y L +VE+ G DAIE FS + +G+D R +
Sbjct: 123 RERGVAFFVSIGYKPEELALLGPKVEKAGADAIE--FSTHY----------IGKDYRPVV 170
Query: 208 EVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPE 267
E + ++P++AK++P +I + + + +G+ A NTI + ID++T P
Sbjct: 171 EAAKALRESVSIPIFAKLSPFTPNIPDLVKDLEKVRVDGIVATNTIGPALNIDVETGMP- 229
Query: 268 PCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFIL 327
V G G S A+ PI+L V A+ K + G+GG+ G D E+ +
Sbjct: 230 -IVGGPYGYGWMSGPALKPISLAVVAEAARSTK-------LPIIGVGGITRGVDVIEYFM 281
Query: 328 LGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQ 387
GA+ VQ+CT ++ G+ + +R+ E +++ H +SSI D +G +++Y V +
Sbjct: 282 AGASAVQICTAALVEGFSVFQRILNETVTWLEKHGYSSILDVKGLALKYLKPEPRRVWAK 341
Query: 388 QEAIQQRKAVRKGL 401
+ ++K + G
Sbjct: 342 PPLVDEKKCIGCGF 355
>gi|123406266|ref|XP_001302760.1| Dihydroorotate dehydrogenase family protein [Trichomonas vaginalis
G3]
gi|123470791|ref|XP_001318599.1| Dihydroorotate dehydrogenase family protein [Trichomonas vaginalis
G3]
gi|121884080|gb|EAX89830.1| Dihydroorotate dehydrogenase family protein [Trichomonas vaginalis
G3]
gi|121901362|gb|EAY06376.1| Dihydroorotate dehydrogenase family protein [Trichomonas vaginalis
G3]
Length = 811
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 174/365 (47%), Gaps = 32/365 (8%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L G++ NP I S P Y ++ F G G V KT+ L VI +
Sbjct: 364 LETEFCGMKFKNPSGISSAPVSGTYECIRNCFKAGMGWAVTKTI-LPTKDVIREN-DFRI 421
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
++A N G NI ++++ E L K+LKA +PD++L+ASI +K W+
Sbjct: 422 VKADENPGPSGSFC---NICMMTEHTEEYWLDTIKKLKAEFPDRVLVASIATSDSKERWQ 478
Query: 167 ELIDRVEETGIDAIEVNFSCP---HGM--------PERKMGAAVGQDCRLLEEVCGWINA 215
L+ V G DA+E+N SCP HG E K+G A+G ++ + ++
Sbjct: 479 NLVKNVIAAGADALELNLSCPNEVHGEGGCKGGFDTENKIGMALGTHPISVKRISQYVKE 538
Query: 216 KATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGI-DLKTLRPEPCVEGYS 274
TVP + K+TPNITD + A+ AL G++GV+ INT+ + T P+ E Y
Sbjct: 539 ATTVPFFVKLTPNITDPIDIAQAALEGGADGVAMINTVSGIAKFWPDGTPLPQVGKEKYV 598
Query: 275 TPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQ 334
GG S V PIAL ++ + + + GIGG+ +G A + + G++ Q
Sbjct: 599 LSGGLSGDQVRPIALRQISRVHNKF------PEMPILGIGGIGSGYTALQHLYAGSSVFQ 652
Query: 335 VCTGVMMHGYGLVKRLCEELKDFMKMHNFS-SIEDFRGASIEYFTTHTEL---VRMQQEA 390
+C+ + + Y +V+ E+ ++ + +S S D R A + ++T L V + ++
Sbjct: 653 MCSAIQRYSYDIVR----EVNAGLQFYLYSWSRPDLR-AKLSHYTEMKTLPIQVPIPEDT 707
Query: 391 IQQRK 395
Q RK
Sbjct: 708 KQDRK 712
>gi|84490203|ref|YP_448435.1| dihydroorotate dehydrogenase 1B [Methanosphaera stadtmanae DSM
3091]
gi|84373522|gb|ABC57792.1| PyrD [Methanosphaera stadtmanae DSM 3091]
Length = 306
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 161/322 (50%), Gaps = 28/322 (8%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGAN 112
G+++ NP + +G GT + MK G G +V K+ S++A + P ++ G
Sbjct: 8 GMKLSNPLFLAAGILGTTASSMKMVARAGAGGIVTKSFSIEANDGYD-NPTIVKIEGGVI 66
Query: 113 GSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRV 172
S ++ +E +E K L + +IASI + ++ + ++ ++
Sbjct: 67 NSVG-----------LASPGVEAKKEELKDLNEIRDKTPVIASIYGD-SEEVFSDVANQT 114
Query: 173 EETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK-ATVPVWAKMTPNITD 231
++ +DA E+N SCPH + G+ +G++ L ++ + VP+ K+TPN+TD
Sbjct: 115 KDY-VDAFELNVSCPHA--KCGFGSNIGENPELTHDIVSSVKDNIKDVPIIVKLTPNVTD 171
Query: 232 ITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGK 291
ITE A+ A +G++ ++ IN++ + ID KT RP + GG + + PIAL
Sbjct: 172 ITEIAKAAEDAGADALTLINSVGPGLRIDYKTARPILN----NVFGGIAGPMIKPIAL-- 225
Query: 292 VMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLC 351
K + + D L G+GG+ T DA EF+ GA+ +Q+ T +M G + K +
Sbjct: 226 -----KCVYKTYETVDIPLFGVGGIRTYKDALEFLYAGASLLQIGTSIMYEGPEIFKNIT 280
Query: 352 EELKDFMKMHNFSSIEDFRGAS 373
+L +F++ + + ++E+ G S
Sbjct: 281 HDLSNFLEENGYKNVEEIIGLS 302
>gi|339441582|ref|YP_004707587.1| dihydroorotate dehydrogenase [Clostridium sp. SY8519]
gi|338900983|dbj|BAK46485.1| dihydroorotate dehydrogenase [Clostridium sp. SY8519]
Length = 301
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 168/332 (50%), Gaps = 34/332 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+ +++ G+++ NP + SG G+ + GAVV K V+ + N TPR A
Sbjct: 2 NTKVSIAGVELKNPIMTASGTFGSGEEYSEFVDLNRLGAVVTKGVA-NVPWPGNPTPRVA 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ G + IG +N I++ R + LK++ D ++ ++ + +
Sbjct: 61 EVYGGMLNA-----IGLQNPGIDVFMKRDI-PFLKQY--------DTRIVVNVCG-HTEE 105
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E+++R+ + +D +E+N SCP+ R+ G A GQD +++E + G + AKA PV
Sbjct: 106 EYLEVVERLADQPVDLLEINISCPN---VREGGMAFGQDPKMVEAITGAVKAKARQPVIM 162
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+TDI E AR A G++GVS INT+ M ID+ R V T GG S A
Sbjct: 163 KLSPNVTDIAEMARAAEAGGADGVSLINTLTG-MKIDVDRRR---FVLANRT-GGMSGPA 217
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
VHPIA+ V A+ + + + G+GGV+T DA E IL GA V V T +
Sbjct: 218 VHPIAVRMVYETAQAV-------NIPIIGMGGVQTAEDALELILAGATAVSVGTANFYNP 270
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
+ + E ++ +M+ H S+ + GA E
Sbjct: 271 RATAE-IAEGIEAYMQKHRIESVSELIGAVSE 301
>gi|94266829|ref|ZP_01290491.1| Dihydroorotate dehydrogenase 1 [delta proteobacterium MLMS-1]
gi|93452504|gb|EAT03098.1| Dihydroorotate dehydrogenase 1 [delta proteobacterium MLMS-1]
Length = 327
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 161/337 (47%), Gaps = 37/337 (10%)
Query: 40 SASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVIN 99
S + PDL + + L + NP + SG G GAVV K +SL + N
Sbjct: 21 STAQSPDLGVKIASLTLANPVMSASGTFGYGREFADYLAVADLGAVVVKGISL-LPRAGN 79
Query: 100 VTPRYARLRAGANGSAKGQIIGWENI---ELISDRPLETMLKEFKQLKALYPDKILIASI 156
PR G + IG EN+ + ISD+ L +Q +A IL S+
Sbjct: 80 PPPRIVETPCGMLNA-----IGLENVGVEKFISDK-----LPWLRQAQATVVVNILGNSV 129
Query: 157 MEEYNKAAWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINA 215
EEY EL R++ GI AIEVN SCP+ ++ G A G D R+ V +
Sbjct: 130 -EEY-----RELAQRLDGVAGIGAIEVNISCPN---VKEGGVAFGTDPRMAARVTQAVRE 180
Query: 216 KATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYST 275
+ +P+ K++PN++DI AR A G++ VS INT++ M IDL++ RP+ +
Sbjct: 181 ASGLPLIIKLSPNVSDIATMARAAAEHGADAVSLINTLLG-MAIDLESRRPKLA----NV 235
Query: 276 PGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQV 335
GG S A+ P+AL V A +K + GIGG+ DA EFI+ GA+ +QV
Sbjct: 236 VGGLSGPAIKPVALRMVWQAAGSVK-------IPVIGIGGIMNATDALEFIVAGASAIQV 288
Query: 336 CTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
T ++ + + ++D++ SIE+ RG+
Sbjct: 289 GTANLIRPRATAE-IINGIQDYLTSRQMGSIEELRGS 324
>gi|45358002|ref|NP_987559.1| dihydroorotate dehydrogenase 1B [Methanococcus maripaludis S2]
gi|44920759|emb|CAF29995.1| Dihydroorotate oxidase [Methanococcus maripaludis S2]
Length = 304
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 156/318 (49%), Gaps = 51/318 (16%)
Query: 54 LQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANG 113
++ NP + +G G + +KR G GAV K+V ++ N P + G
Sbjct: 9 IEFKNPVFLAAGVMGETGSALKRMAKNGAGAVCTKSVGIEKKPGHN-NPTMVEVEGGFLN 67
Query: 114 SAKGQIIGWEN---------IELISDRPLETMLKEFKQLKALYPDKILIASIM----EEY 160
+ +G N IE I D E K++ +I SI E+
Sbjct: 68 A-----MGLPNPGADEYAGEIERIKD--------EMKRMNVK-----IIGSIYGKNDSEF 109
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
KAA E+I +D +E+N SCPH G+++GQD L + V + + +P
Sbjct: 110 QKAA--EIIGNY----VDVLELNISCPHA--GGGYGSSIGQDPYLCKNVVSAVKDVSDIP 161
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
V AK+TPN+TDI E A + +G++G+ AINT+ M ID+++ P + G GG S
Sbjct: 162 VIAKLTPNVTDIKEIANAVVNAGADGIVAINTLGPGMVIDIESGVP---ILGNRV-GGMS 217
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
KAV PIA+ V I + D + G+GG+ TG DA EF++ GA+ VQV TGV
Sbjct: 218 GKAVKPIAVKNVYDICSAV-------DVPVIGVGGITTGADAIEFMMAGASAVQVGTGVY 270
Query: 341 MHGYGLVKRLCEELKDFM 358
GY + +++ E+++++
Sbjct: 271 YRGYDIFQKINNEIEEYL 288
>gi|253700442|ref|YP_003021631.1| dihydroorotate dehydrogenase 1B [Geobacter sp. M21]
gi|259547519|sp|C6E6N2.1|PYRDB_GEOSM RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|251775292|gb|ACT17873.1| dihydroorotate dehydrogenase family protein [Geobacter sp. M21]
Length = 305
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 31/329 (9%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
PD+S+ V G++M NP + SG G E GA+++K +SL K N TPR
Sbjct: 4 PDMSVAVAGIKMRNPVMTASGTFGYGAEFADYLDLESIGAMISKGLSLKP-KAGNPTPRI 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKI-LIASIMEEYNKA 163
G + IG +N+ + D +E L K + P + L + +EEY +
Sbjct: 63 VETPGGMLNA-----IGLQNVGI--DAFIEQKLPYLKNVNT--PVIVNLYGNTLEEYGEV 113
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
A +D + G+ IEVN SCP+ ++ G G D +EV + + P+
Sbjct: 114 AAR--LDGL--AGVAGIEVNISCPN---VKQGGIVFGTDPGAAQEVVRLVKKNTSKPMIV 166
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+TD+ A+ +G++ +S INT+ M IDL+ RP + GG S A
Sbjct: 167 KLSPNVTDVVVMAKACADAGADALSLINTLTG-MAIDLERRRPVLA----NVTGGLSGPA 221
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ P+AL V + K +K L GIGG+ G DA EF+L GA VQV T +
Sbjct: 222 IKPVALRMVWQVGKAVK-------LPLIGIGGIMNGRDALEFMLAGATAVQVGTASFLDP 274
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
+R+ E++ ++ HN S+ GA
Sbjct: 275 SA-AQRIAREMEQYLADHNIESVSSLIGA 302
>gi|322419287|ref|YP_004198510.1| dihydroorotate dehydrogenase family protein [Geobacter sp. M18]
gi|320125674|gb|ADW13234.1| dihydroorotate dehydrogenase family protein [Geobacter sp. M18]
Length = 305
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 155/328 (47%), Gaps = 29/328 (8%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
PD+S+ + G+QM NP + SG G E GA+V K +SL K N TPR
Sbjct: 4 PDMSVVLAGIQMRNPVMTASGTFGYGAEFADYLDLESIGAMVTKGLSLKP-KAGNPTPRI 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
G + IG +N+ + D +E L K + L + +EEY + A
Sbjct: 63 VETPGGMLNA-----IGLQNVGI--DAFIEQKLPYLKDVNTPVIAN-LYGNTLEEYGEVA 114
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
+D + G+ IEVN SCP+ ++ G G D EV + + P+ K
Sbjct: 115 SR--LDGLP--GVAGIEVNISCPN---VKQGGIVFGTDPGAAREVVSLVRKNTSKPLILK 167
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
++PN+TD+ A+ +G++ +S INT+ M IDL+ RP + GG S A+
Sbjct: 168 LSPNVTDVVLMAKACADAGADALSLINTLTG-MAIDLERRRPVLA----NVTGGLSGPAI 222
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
P+AL V +A+ +K L GIGG+ G DA EF+L GA VQV T +
Sbjct: 223 KPVALRMVWQVARAVK-------LPLIGIGGIMNGRDALEFMLAGATAVQVGTASFLDPS 275
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGA 372
+R+ E+++++ HN ++ GA
Sbjct: 276 A-AQRIAREMEEYLAEHNIENVRSLIGA 302
>gi|159904860|ref|YP_001548522.1| dihydroorotate dehydrogenase 1B [Methanococcus maripaludis C6]
gi|159886353|gb|ABX01290.1| dihydroorotate dehydrogenase family protein [Methanococcus
maripaludis C6]
Length = 304
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 154/309 (49%), Gaps = 33/309 (10%)
Query: 54 LQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANG 113
++ NP + +G G + +KR G GAV K++ ++ N P + G
Sbjct: 9 IEFKNPVFLAAGVMGETGSALKRMAKNGAGAVCTKSIGIEKKPGHN-NPTMVEVEGGFLN 67
Query: 114 SAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM----EEYNKAAWEELI 169
+ G E +E + E K++ +I SI E+ KAA E+I
Sbjct: 68 AMGLPNPGAEEYA----GEIERIKDEMKRINVK-----IIGSIYGKNDSEFQKAA--EII 116
Query: 170 DRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNI 229
+D +E+N SCPH G+++GQD L + V + + +PV AK+TPN+
Sbjct: 117 GNY----VDVLELNISCPHA--GGGYGSSIGQDPGLCKNVVSAVKDVSDIPVIAKLTPNV 170
Query: 230 TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL 289
TDI E A + +G++G+ AINT+ M ID+++ P + G GG S KA+ PIA+
Sbjct: 171 TDIKEIANAVVNAGADGIVAINTLGPGMVIDIESGVP---ILGNRV-GGMSGKAIKPIAV 226
Query: 290 GKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKR 349
V I + D + G+GG+ TG DA EF++ GA+ VQV TGV GY + ++
Sbjct: 227 KNVYDICSAV-------DVPVIGVGGITTGDDAIEFMMAGASAVQVGTGVYYRGYDIFQK 279
Query: 350 LCEELKDFM 358
+ E+++++
Sbjct: 280 INNEIEEYL 288
>gi|150401339|ref|YP_001325105.1| dihydroorotate dehydrogenase 1B [Methanococcus aeolicus Nankai-3]
gi|150014042|gb|ABR56493.1| dihydroorotate dehydrogenase family protein [Methanococcus aeolicus
Nankai-3]
Length = 305
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 164/333 (49%), Gaps = 33/333 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + G+ NP + +G G + +KR G GAV K++ L+ K+ + P
Sbjct: 2 LKTNLFGIDFKNPVFLAAGIMGETGSALKRMGKNGAGAVCTKSIGLE-KKMGHNNPTMVE 60
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
+ G+ N + + + + E ++++ K+ + I Y K + E
Sbjct: 61 VEG-----------GFLNAMGLPNPGINEYVGEIEEIRDDL-KKMGVKIIGSIYGKDSNE 108
Query: 167 ELIDRVEET---GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWI-NAKATVPVW 222
+V ET +D IE+N SCPH GA +GQ+ L V + + PV
Sbjct: 109 --FSKVAETISPFVDVIELNISCPHA--GGFYGAQIGQNPDLSHSVVSAVKDCVNKQPVM 164
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
AK+TPN+ DI E A+ +G++G+ AINT+ M ID++T +P + G + GG S K
Sbjct: 165 AKLTPNVADIKEIAKSVEDAGADGIVAINTLGPGMVIDIETKKP---ILG-NKFGGMSGK 220
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ PIA+ V I ++ + + G+GG+ G DA EF+L GA+ VQV TGV
Sbjct: 221 AIKPIAIKNVYDI-------YSAVELPIIGVGGITMGLDAIEFMLAGASAVQVGTGVYYR 273
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
GY + ++CEE++ F+ N ++D G + E
Sbjct: 274 GYDIFDKICEEMEQFLIEKNI-KLKDIVGGAHE 305
>gi|197118778|ref|YP_002139205.1| dihydroorotate dehydrogenase 1B [Geobacter bemidjiensis Bem]
gi|226710763|sp|B5EFU4.1|PYRDB_GEOBB RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|197088138|gb|ACH39409.1| dihydroorotate dehydrogenase [Geobacter bemidjiensis Bem]
Length = 305
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 31/329 (9%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
PD+S+ V G++M NP + SG G E GA+++K +SL K N TPR
Sbjct: 4 PDMSVAVAGIKMRNPVMTASGTFGYGAEFADYLDLECIGAMISKGLSLKP-KAGNPTPRI 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKI-LIASIMEEYNKA 163
G + IG +N+ + D +E L K + P + L + +EEY +
Sbjct: 63 VETPGGMLNA-----IGLQNVGI--DAFIEQKLPYLKNVNT--PVIVNLYGNTLEEYGEV 113
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
A +D + +G+ IEVN SCP+ ++ G G D +EV + T P+
Sbjct: 114 AAR--LDGL--SGVAGIEVNISCPN---VKQGGIVFGTDPGAAQEVVRLVKKNTTKPMIV 166
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+TD+ A+ +G++ +S INT+ M IDL+ RP + GG S A
Sbjct: 167 KLSPNVTDVVLMAKACADAGADALSLINTLTG-MAIDLERRRPVLA----NVTGGLSGPA 221
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ P+AL V +AK +K L GIGG+ G DA EF+L GA VQV T +
Sbjct: 222 IKPVALRMVWQVAKAVK-------LPLIGIGGIMNGRDALEFMLAGATAVQVGTASFLDP 274
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
+R+ E++ ++ H S+ GA
Sbjct: 275 SA-AQRIAREMEQYLVDHKIESVSSLIGA 302
>gi|223477397|ref|YP_002582066.1| Dihydroorotate dehydrogenase, catalytic subunit [Thermococcus sp.
AM4]
gi|214032623|gb|EEB73452.1| Dihydroorotate dehydrogenase, catalytic subunit [Thermococcus sp.
AM4]
Length = 300
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 160/333 (48%), Gaps = 40/333 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + + GL+ NP ++ SG RA +EG G VV K++ ++ K + P
Sbjct: 4 LEVELFGLRFENPLILASGINDKVPEQWIRAHEEGAGGVVTKSIGIEPRKGYD-NPTIVE 62
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM----EEYNK 162
L G + GW+ + ++ D LI SI EE+
Sbjct: 63 LPCGLINAMGLPNPGWKGF--------------LEMVEGYTFDFPLIVSIFGGTPEEFAF 108
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
A ++L D DA E+N SCPH + G +GQ + EV + PV
Sbjct: 109 LA-QKLSDVA-----DAFELNLSCPHA---KGYGMEIGQKPENVYEVVKAVKDATDKPVI 159
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
AK+TPNI DIT+ A ++G++ VSAINT+ +V ID+ +P + GGYS
Sbjct: 160 AKLTPNIDDITKLGLAAEKAGADAVSAINTLKAV-AIDIYARKPILS----NRVGGYSGP 214
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
V P+AL V +AK + + + GIGG+ T DA EF+L GA+ +Q+ T V +
Sbjct: 215 GVKPVALRAVYDLAKAL-------EVPVIGIGGITTWQDAVEFLLAGASALQIGTAVSLR 267
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
G+ + + + E ++ +++ FSS+++ G ++E
Sbjct: 268 GWKVFREIKEGIEAYLEGEGFSSVDEIVGLALE 300
>gi|85683011|gb|ABC73481.1| CG2194 [Drosophila miranda]
Length = 347
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 92/143 (64%), Gaps = 3/143 (2%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + GL+ NPF + S PP T+ +++RAF++GWG VV KT LD V NV+PR
Sbjct: 207 DISVEMCGLKFENPFGLASAPPTTSTAMIRRAFEQGWGFVVTKTFGLDKDLVTNVSPRI- 265
Query: 106 RLRAGANGSAKGQIIG-WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+R +G G G + NIELIS++ E L+ +LK +P+KI+IASIM +N+A
Sbjct: 266 -VRGTTSGYKYGPQQGCFLNIELISEKRAEYWLRSIGELKRDFPEKIVIASIMCSFNEAD 324
Query: 165 WEELIDRVEETGIDAIEVNFSCP 187
W EL + E +G DA+E+N SCP
Sbjct: 325 WTELSIKAEASGADALELNLSCP 347
>gi|16081529|ref|NP_393883.1| dihydroorotate dehydrogenase 1B [Thermoplasma acidophilum DSM 1728]
gi|13878694|sp|Q9HL35.1|PYRDB_THEAC RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|10639575|emb|CAC11547.1| DIHYDROOROTATE DEHYDROGENASE B related protein [Thermoplasma
acidophilum]
Length = 300
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 163/333 (48%), Gaps = 40/333 (12%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS +V G+++ NP ++ SG N M + G AVV K++ ++
Sbjct: 3 DLSTSVAGIRLENPLMLASGILDENGYTMLDVMNNGAAAVVTKSIGMEER---------- 52
Query: 106 RLRAGANGSAKGQIIGWE----NIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYN 161
NG + I+ + N +S+ ++ +E + K K +I S+ +
Sbjct: 53 ------NGYSAPVIVEYGDSLINAVGLSNPGIDNFAEEIRIAKR--SGKPVIGSVFAS-D 103
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
++ L +++E G DA+E+N SCPH + G VG D L+E++ + +K +VPV
Sbjct: 104 AESFVNLGRKMQEYGCDAVELNLSCPH---VKGFGLEVGSDPDLVEDIVNEMKSKISVPV 160
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+AK++PN++DI E A+ A ++ + INT+ + M ID++ P Y GG S
Sbjct: 161 FAKLSPNVSDIIEIAKAAEKA--DAYVLINTVKA-MKIDIRARMP-VLTNAY---GGLSG 213
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
A+ P+ + V + K + + G+GG+ T DA E+I+ GA+ VQ+ T +
Sbjct: 214 PAIKPVGVRYVYEVKK-------ETGKDIIGVGGITTYEDAVEYIMAGASAVQIGTALYT 266
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRGASI 374
G + + + ++ FM F SI+D G +I
Sbjct: 267 VGKSVFRNIISQMNTFMDDEKFHSIQDMVGVAI 299
>gi|18977911|ref|NP_579268.1| dihydroorotate dehydrogenase 1B [Pyrococcus furiosus DSM 3638]
gi|397652032|ref|YP_006492613.1| dihydroorotate dehydrogenase 1B [Pyrococcus furiosus COM1]
gi|30173338|sp|Q8U0P6.1|PYRDB_PYRFU RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|18893677|gb|AAL81663.1| dihydroorotate dehydrogenase (dihydroorotate oxidase) (dhodehase)
[Pyrococcus furiosus DSM 3638]
gi|393189623|gb|AFN04321.1| dihydroorotate dehydrogenase 1B [Pyrococcus furiosus COM1]
Length = 300
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 161/325 (49%), Gaps = 32/325 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
+ I + G+ NP ++ SG +++RA EG G VV K++ ++ K + P
Sbjct: 3 IKIELFGITFENPLILASGVVDMTPELLRRAHKEGAGGVVTKSIGIEPRKGYD-NPTVVE 61
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
+ G + GW+ L+EF++ +P +I SI N +
Sbjct: 62 VPCGLINAMGLPNPGWK-----------AFLEEFEKESFDFP---VIVSIFGG-NPEEFA 106
Query: 167 ELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMT 226
L +++E G DA E+N SCPH + G +GQD + V + PV AK+T
Sbjct: 107 FLAEKLERVG-DAFELNLSCPHA---KGYGLEIGQDPENVYRVVKAVKDVTDKPVIAKLT 162
Query: 227 PNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHP 286
PN +DIT+ A ++ ++GVSAINT+ ++ ID+ RP + GGYS + P
Sbjct: 163 PNTSDITKLGLAAEKAEADGVSAINTLKAI-AIDIYAKRPILS----NKFGGYSGPGIKP 217
Query: 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGL 346
IAL V +A + D + GIGG+ T DA EF+L GA+ VQ+ T V + G+ +
Sbjct: 218 IALRAVYDLASKL-------DIPIIGIGGITTWQDAVEFLLAGASAVQIGTAVYLKGFSV 270
Query: 347 VKRLCEELKDFMKMHNFSSIEDFRG 371
+ + E ++ +++ FSS+++ G
Sbjct: 271 FREIAEGIRKYLEEEGFSSVKEIIG 295
>gi|238853381|ref|ZP_04643760.1| dihydroorotate dehydrogenase B, catalytic subunit [Lactobacillus
gasseri 202-4]
gi|282851814|ref|ZP_06261177.1| dihydroorotate dehydrogenase 1B [Lactobacillus gasseri 224-1]
gi|238833953|gb|EEQ26211.1| dihydroorotate dehydrogenase B, catalytic subunit [Lactobacillus
gasseri 202-4]
gi|282557056|gb|EFB62655.1| dihydroorotate dehydrogenase 1B [Lactobacillus gasseri 224-1]
Length = 307
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 162/319 (50%), Gaps = 30/319 (9%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGA 111
GL + NP + SG G + FD GA+V KT + A N P+ A L G
Sbjct: 10 GLDLKNPVMPASGTFGFGDVPAAKKFDLNDLGAMVIKTTT-PHATTGNPQPQIAVLETGV 68
Query: 112 NGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDR 171
S +G N + D +E LK +Q YPD ++AS+ E ++A + E+ +
Sbjct: 69 LNS-----VGLTNPGV--DAVIEDKLKPLRQS---YPDLPIMASVGGE-DEAGYVEVAKK 117
Query: 172 VEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNIT 230
+ ++G ++A+E+N SCP+ + G + G ++E + I A VP++ K+TPN+T
Sbjct: 118 LSDSGLVNALEINVSCPN---VNQGGMSFGVHPDVVESLTKKIKAVTNVPIYVKLTPNVT 174
Query: 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALG 290
DIT+ ++ A + G++G+S INT++ M ID+KT +P V G++ GG S +AV P+AL
Sbjct: 175 DITQISKAAEKGGADGLSLINTLLG-MDIDIKTRKP---VLGHNI-GGLSGEAVKPVAL- 228
Query: 291 KVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRL 350
+M+ + G+GG+ + D +F+L GAN V V T K +
Sbjct: 229 ------RMVHQVRQSTSLPIIGMGGISSAQDVIKFMLAGANAVAVGTAHFKDSIA-SKHI 281
Query: 351 CEELKDFMKMHNFSSIEDF 369
+EL + ++ I D
Sbjct: 282 ADELPNELEKLGIEDINDL 300
>gi|341582836|ref|YP_004763328.1| dihydroorotate dehydrogenase 1B [Thermococcus sp. 4557]
gi|340810494|gb|AEK73651.1| dihydroorotate dehydrogenase 1B [Thermococcus sp. 4557]
Length = 301
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 158/333 (47%), Gaps = 40/333 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + + G++ NP ++ SG RA +EG G VV K++ ++ K + P
Sbjct: 4 LEVELFGIRFRNPLILASGINDKVPEQWIRAHEEGAGGVVTKSIGIEPRKGYD-NPTIVE 62
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM----EEYNK 162
L G + GW + ++ D LI SI EE+
Sbjct: 63 LPYGLVNAMGLPNPGWRGF--------------LEMVEGYTFDFPLIVSIFGGTPEEFAF 108
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
A E+L D DA E+N SCPH + G +GQ+ + EV PV
Sbjct: 109 LA-EKLSDVA-----DAFELNLSCPHA---KGYGMEIGQNPENVHEVVKAAKDATDRPVI 159
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
AK+TPNI DIT+ A ++G++ VSAINT+ +V ID+ RP + GGYS
Sbjct: 160 AKLTPNIDDITKLGVAAEKAGADAVSAINTLKAV-AIDVYARRPILS----NRVGGYSGP 214
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
V P+AL V +A+ + + + GIGG+ T DA EF+L GA+ +QV T V +
Sbjct: 215 GVKPVALRAVYDLARTL-------EIPVIGIGGITTWQDAVEFLLAGASALQVGTAVSLR 267
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
G+ + + + + + +++ FSS++D G ++E
Sbjct: 268 GWKVFQEINKGIARYLEDEGFSSVKDIVGLALE 300
>gi|302391680|ref|YP_003827500.1| dihydroorotate oxidase B, catalytic subunit [Acetohalobium
arabaticum DSM 5501]
gi|302203757|gb|ADL12435.1| dihydroorotate oxidase B, catalytic subunit [Acetohalobium
arabaticum DSM 5501]
Length = 305
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 172/342 (50%), Gaps = 47/342 (13%)
Query: 43 AEPDLSITVNGLQMPNPFVIGSGPPG-----TNYTVMKRAFDEGWGAVVAKTVSLDAAKV 97
++PDL++ +NGL++ NP V SG G +Y + R G V+ K +L K
Sbjct: 2 SKPDLAVDLNGLELNNPVVTASGTFGFGEEYEDYVDLDR-----LGGVMVKGTTLKP-KQ 55
Query: 98 INVTPRYARLRAGANGSAKGQIIGWEN--IELISDRPLETMLK-EFKQLKALYPDKILIA 154
N TPR A AG + IG +N +E D L + EF+ + + A
Sbjct: 56 GNPTPRIAETPAGMLNA-----IGLQNPGVEYFIDEILPKIRDYEFQTIVNMS------A 104
Query: 155 SIMEEYNKAAWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWI 213
+ +EEY +EL +++ + GI A+EVN SCP+ +K G A G + ++ V +
Sbjct: 105 NTVEEY-----QELAEKLSQPEGIAALEVNISCPN---VKKGGLAFGTEPKMAAGVVKAV 156
Query: 214 NAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGY 273
+PV K++PN+TDITE A+ +GS+ +S INT++ M ID+ T P
Sbjct: 157 TENTDLPVITKLSPNVTDITEIAQAVEEAGSDIISLINTLVG-MKIDIDTQEPILA---- 211
Query: 274 STPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTV 333
+T GG S A+ P+A+ V +A+ + D L G+GG+ DA EF+L GA+ V
Sbjct: 212 NTIGGLSGPAIRPVAVKMVYQVAQAV-------DLPLIGMGGIMNSRDAVEFLLAGASAV 264
Query: 334 QVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
V T G+ + + +++++ + S+E+ G +I+
Sbjct: 265 SVGTA-NFSNPGVTMEIIDGIEEYLSEYGCDSVEEIVGKAIK 305
>gi|116629731|ref|YP_814903.1| dihydroorotate dehydrogenase 1B [Lactobacillus gasseri ATCC 33323]
gi|420147086|ref|ZP_14654362.1| Dihydroorotate dehydrogenase (DHOD) [Lactobacillus gasseri CECT
5714]
gi|116095313|gb|ABJ60465.1| dihydroorotate oxidase B, catalytic subunit [Lactobacillus gasseri
ATCC 33323]
gi|398401087|gb|EJN54589.1| Dihydroorotate dehydrogenase (DHOD) [Lactobacillus gasseri CECT
5714]
Length = 311
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 162/319 (50%), Gaps = 30/319 (9%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGA 111
GL + NP + SG G + FD GA+V KT + A N P+ A L G
Sbjct: 14 GLDLKNPVMPASGTFGFGDVPAAKKFDLNDLGAMVIKTTT-PHATTGNPQPQIAVLETGV 72
Query: 112 NGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDR 171
S +G N + D +E LK +Q YPD ++AS+ E ++A + E+ +
Sbjct: 73 LNS-----VGLTNPGV--DAVIEDKLKPLRQS---YPDLPIMASVGGE-DEAGYVEVAKK 121
Query: 172 VEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNIT 230
+ ++G ++A+E+N SCP+ + G + G ++E + I A VP++ K+TPN+T
Sbjct: 122 LSDSGLVNALEINVSCPN---VNQGGMSFGVHPDVVESLTKKIKAVTNVPIYVKLTPNVT 178
Query: 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALG 290
DIT+ ++ A + G++G+S INT++ M ID+KT +P V G++ GG S +AV P+AL
Sbjct: 179 DITQISKAAEKGGADGLSLINTLLG-MDIDIKTRKP---VLGHNI-GGLSGEAVKPVAL- 232
Query: 291 KVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRL 350
+M+ + G+GG+ + D +F+L GAN V V T K +
Sbjct: 233 ------RMVHQVRQSTSLPIIGMGGISSAQDVIKFMLAGANAVAVGTAHFKDSIA-SKHI 285
Query: 351 CEELKDFMKMHNFSSIEDF 369
+EL + ++ I D
Sbjct: 286 ADELPNELEKLGIEDINDL 304
>gi|51246867|ref|YP_066751.1| dihydroorotate dehydrogenase, catalytic subunit [Desulfotalea
psychrophila LSv54]
gi|50877904|emb|CAG37744.1| probable dihydroorotate dehydrogenase, catalytic subunit
[Desulfotalea psychrophila LSv54]
Length = 309
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 156/327 (47%), Gaps = 29/327 (8%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL + + L++ NP + SG G + + GAVV K +SL
Sbjct: 9 DLRVDIGSLELQNPIMTASGTFGYAREFSQLVKLQKLGAVVVKGISLRPRPGNPPPRIVE 68
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
N IG +N+ + DR + + + Q + L ++ +EEY A
Sbjct: 69 TSSGMLNA------IGLQNVGV--DRFISEKMP-YLQEQGLPAVVNILGDSLEEYRDIAQ 119
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+ + V+ GI AIEVN SCP+ +K G A G + + V + A VPV K+
Sbjct: 120 K--LRGVK--GIAAIEVNISCPN---VKKGGVAFGTNPEMAARVTRTVKDAADVPVMVKL 172
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
+PN+TDITE AR G++ +S INT++ MGID+KT RP + GG S A+
Sbjct: 173 SPNVTDITEIARAVEAGGADSLSMINTLIG-MGIDIKTRRPSLA----NIIGGLSGPAIK 227
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
P+AL V +AK++ + GIGG+ + D EF+L GA+ VQ+ T +
Sbjct: 228 PVALRMVYQVAKVVS-------VPIIGIGGISSLEDVIEFLLAGASAVQIGTANFVD-PA 279
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGA 372
+ L E+L D+++ SS+ + GA
Sbjct: 280 ISSDLVEQLADYVQAEGLSSVRELIGA 306
>gi|311110625|ref|ZP_07712022.1| dihydroorotate oxidase [Lactobacillus gasseri MV-22]
gi|311065779|gb|EFQ46119.1| dihydroorotate oxidase [Lactobacillus gasseri MV-22]
Length = 307
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 162/319 (50%), Gaps = 30/319 (9%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGA 111
GL + NP + SG G + FD GA+V KT + A N P+ A L G
Sbjct: 10 GLDLKNPVMPASGTFGFGDVPAAKKFDLNDLGAMVIKTTT-PHATTGNPQPQIAVLETGV 68
Query: 112 NGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDR 171
S +G N + D +E LK +Q YPD ++AS+ E ++A + E+ +
Sbjct: 69 LNS-----VGLTNPGV--DAVIEDKLKPLRQS---YPDLPIMASVGGE-DEAGYVEVAKK 117
Query: 172 VEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNIT 230
+ ++G ++A+E+N SCP+ + G + G ++E + I A VP++ K+TPN+T
Sbjct: 118 LSDSGLVNALEINVSCPN---VNQGGMSFGVHPDVVESLTKKIKAVTNVPIYLKLTPNVT 174
Query: 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALG 290
DIT+ ++ A + G++G+S INT++ M ID+KT +P V G++ GG S +AV P+AL
Sbjct: 175 DITQISKAAEKGGADGLSLINTLLG-MDIDIKTRKP---VLGHNI-GGLSGEAVKPVAL- 228
Query: 291 KVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRL 350
+M+ + G+GG+ + D +F+L GAN V V T K +
Sbjct: 229 ------RMVHQVRQSTSLPIIGMGGISSAQDVIKFMLAGANAVAVGTAHFKDSIA-SKHI 281
Query: 351 CEELKDFMKMHNFSSIEDF 369
+EL + ++ I D
Sbjct: 282 ADELPNELEKLGIEDINDL 300
>gi|377556140|ref|ZP_09785862.1| Dihydroorotate dehydrogenase [Lactobacillus gastricus PS3]
gi|376168741|gb|EHS87473.1| Dihydroorotate dehydrogenase [Lactobacillus gastricus PS3]
Length = 306
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 165/327 (50%), Gaps = 31/327 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYA 105
L+I + GL M NP + SG G FD GA+V KT + A N P+ A
Sbjct: 5 LAINIPGLSMKNPLMPASGTFGFGDVAGASKFDLNQMGAMVMKTTT-PQATTGNSQPQIA 63
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+L G S G E + I+D+ M +Q YP ++ASI + ++ +
Sbjct: 64 QLDDGVLNSVGLTNPGVEAV--INDK----MFNFHQQ----YPVLPIVASIGGD-TESDY 112
Query: 166 EELIDRVEETGI-DAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINA-KATVPVWA 223
E+ ++ ++G+ +A+E+N SCP+ G + G D + +E + + A VPV+
Sbjct: 113 VEVAQKLAQSGLANALELNVSCPN---VASGGMSFGVDPKTVESLTSQVKAVTGNVPVYV 169
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K+TPN+TDITE AR A G++G+S INT++ + ID++T + V G GG+S A
Sbjct: 170 KLTPNVTDITEIARAAEDGGADGLSLINTVLG-LHIDIRTRK---AVLGKGM-GGFSGHA 224
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
V PIA+ V + ++ + + G+GGVET D EF L GA+ + V T H
Sbjct: 225 VKPIAVRMVYQVRQV-------TNLPIIGMGGVETPADVIEFFLAGADAIAVGTAHFKH- 276
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ + R+ + L M +S+E+ R
Sbjct: 277 WDAIPRIAKGLVPLMDQLGIASLEELR 303
>gi|94264825|ref|ZP_01288601.1| Dihydroorotate dehydrogenase 1 [delta proteobacterium MLMS-1]
gi|93454706|gb|EAT04967.1| Dihydroorotate dehydrogenase 1 [delta proteobacterium MLMS-1]
Length = 327
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 161/337 (47%), Gaps = 37/337 (10%)
Query: 40 SASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVIN 99
S+ PDL + + L + NP + SG G GAVV K +SL + N
Sbjct: 21 SSGQSPDLGVKIASLTLANPVMSASGTFGYGREFADYLAVADLGAVVVKGISL-LPRAGN 79
Query: 100 VTPRYARLRAGANGSAKGQIIGWENI---ELISDRPLETMLKEFKQLKALYPDKILIASI 156
PR G + IG EN+ + ISD+ L ++ +A IL S+
Sbjct: 80 PPPRIVETPCGMLNA-----IGLENVGVEKFISDK-----LPWLRRAQATVVVNILGNSV 129
Query: 157 MEEYNKAAWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINA 215
EEY EL R++ G+ A+EVN SCP+ ++ G A G D R+ V +
Sbjct: 130 -EEY-----RELAQRLDGVAGLGALEVNISCPN---VKEGGVAFGTDPRMAARVTQAVRE 180
Query: 216 KATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYST 275
+ +P+ K++PN++DI AR A G++ VS INT++ M IDL+ RP+ +
Sbjct: 181 ASGLPLIIKLSPNVSDIATMARAAAEHGADAVSLINTLLG-MAIDLENRRPKLT----NV 235
Query: 276 PGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQV 335
GG S A+ P+AL V +A +K + GIGG+ DA EFI+ GA+ +QV
Sbjct: 236 VGGLSGPAIKPVALRMVWQVAGSVK-------IPVIGIGGIMNATDALEFIVAGASAIQV 288
Query: 336 CTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
T ++ + + ++D++ SIE+ RG+
Sbjct: 289 GTANLIRPRATAE-IINGIQDYLTSRQMGSIEELRGS 324
>gi|330508198|ref|YP_004384626.1| dihydroorotate dehydrogenase, catalytic subunit [Methanosaeta
concilii GP6]
gi|328929006|gb|AEB68808.1| dihydroorotate dehydrogenase, catalytic subunit [Methanosaeta
concilii GP6]
Length = 299
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 156/323 (48%), Gaps = 40/323 (12%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
P LS+ GL + NP ++ +G GT + RA G G VV K+ I PR
Sbjct: 2 PSLSVHAGGLDLKNPVLLAAGILGTTGASLCRASRAGAGGVVTKS--------IGSVPRA 53
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLET-MLKEFK-QLKALYPDKI-LIASIMEEYN 161
G I + LI+ L K+F+ ++ A + +IASI
Sbjct: 54 GH---------PGPCIVHVDCGLINAMGLPNPSYKDFQAEIDAARKGGVPVIASIF---- 100
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
++ EE DA+E+N SCPH K G+ +G+ L+E V G + A ++VPV
Sbjct: 101 ASSAEEFAQISRNLDADALELNLSCPH---AEKYGSELGRYPDLVESVTGAVKAASSVPV 157
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
W K+TPN DI E A R G++ V AINT + M ID++T P + G GG S
Sbjct: 158 WVKLTPNTADILELGLAAQRGGADAVVAINT-LKAMAIDIETGYP---ILGNRF-GGLSG 212
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
+A+ P+A+ V +A + + + G+GG+ + DA E I+ GA+ +QV T ++
Sbjct: 213 RAIKPVAVRAVYDLASRL-------EIPVIGVGGISSWEDAVEMIMAGASAIQVGT-ALL 264
Query: 342 HGYGLVKRLCEELKDFMKMHNFS 364
GYG+ + + L +++ + +
Sbjct: 265 QGYGIFEEIASGLSAYLERKSIT 287
>gi|312137365|ref|YP_004004702.1| dihydroorotate oxidase b, catalytic subunit [Methanothermus
fervidus DSM 2088]
gi|311225084|gb|ADP77940.1| dihydroorotate oxidase B, catalytic subunit [Methanothermus
fervidus DSM 2088]
Length = 301
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 152/319 (47%), Gaps = 30/319 (9%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGAN 112
GL++ NP ++ +G G + + R +D G GAVV K+ + + K P + G
Sbjct: 9 GLKLRNPTMLAAGILGMTASSLNRIYDHGAGAVVTKSFTKNPKKGYK-NPVIVEVDCGIL 67
Query: 113 GSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRV 172
+ IG N +K FK+ +I I + + + + E+ V
Sbjct: 68 NA-----IGLSN----------PGVKIFKEELKKVKKEIPIIASIAGSSPKEFAEVSKEV 112
Query: 173 EETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDI 232
+ +D IE+N SCPH G+ +GQD +L EV + +PV K+T N+ DI
Sbjct: 113 SDL-VDMIEINVSCPHA--GEGYGSFIGQDPKLTYEVVKAVKKAVNLPVSVKLTANVADI 169
Query: 233 TEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKV 292
E A A + G + ++ IN++ M ID+KT +P + GG S A+ PIA+ V
Sbjct: 170 VEIAINAKKGGCDALTLINSVGPGMKIDIKTAKPVLS----NRFGGLSGPAIKPIAIRCV 225
Query: 293 MSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCE 352
I + + + + G+GG+ T D EF+ GA VQ+ TG++ G + + +
Sbjct: 226 YEI-------YENMEIPIIGVGGITTYKDVIEFLYAGARAVQIGTGILYKGVNIFQDIVY 278
Query: 353 ELKDFMKMHNFSSIEDFRG 371
LK FMK +NF S+++ G
Sbjct: 279 GLKKFMKENNFKSVDEMVG 297
>gi|435851007|ref|YP_007312593.1| dihydroorotate dehydrogenase family protein [Methanomethylovorans
hollandica DSM 15978]
gi|433661637|gb|AGB49063.1| dihydroorotate dehydrogenase family protein [Methanomethylovorans
hollandica DSM 15978]
Length = 299
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 160/335 (47%), Gaps = 42/335 (12%)
Query: 49 ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLR 108
+ + G+ + NP ++ +G GT + R EG GAVV K++ AK + P +L
Sbjct: 1 MNITGMHLKNPTILAAGIMGTTGASLIRMGREGAGAVVTKSIG-PQAKDGHSNPSMVKLD 59
Query: 109 AGANGSAKGQIIGWENIELISDRPLETMLKEFKQLK--ALYPDKILIASIM----EEYNK 162
G + N + + E L E ++ K A P +IASI EE+
Sbjct: 60 CG-----------YLNAMGLPNPSYEAFLPELEKAKNKAGVP---VIASIFGGNPEEFRM 105
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
A E LI DA E+N SCPH M GA+VG D +++ V I +PVW
Sbjct: 106 VA-EGLIPGKP----DAFELNVSCPHAM---GYGASVGTDPAMVKAVTSAICEVTDIPVW 157
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
K+TPN+TDI + A G++ V AINT+ M ID+ + P V G + GG S +
Sbjct: 158 VKLTPNVTDIVTIGKAAQAGGADAVVAINTVRG-MAIDIHSGYP---VLG-NRFGGLSGE 212
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
AV P+A+ K + + + D + G+GG+ T A E I+ GA+ VQ+ +GV
Sbjct: 213 AVRPVAV-------KCVYDLYANLDIPIIGVGGISTWQHAVEMIMAGASAVQIGSGV-YE 264
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYF 377
G + + + F+K H ++ ED G + + F
Sbjct: 265 GLNVFSDINAGINRFLKEHGYTKTEDITGIAHKRF 299
>gi|347531097|ref|YP_004837860.1| dihydroorotate dehydrogenase 1B [Roseburia hominis A2-183]
gi|345501245|gb|AEN95928.1| dihydroorotate dehydrogenase 1B [Roseburia hominis A2-183]
Length = 302
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 162/332 (48%), Gaps = 40/332 (12%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+L I + G+ + NP + SG G+ + GAVV K V+ + N TPR A
Sbjct: 2 NLGIDLCGVALKNPVMTASGTFGSGEEYSEFVDLNKLGAVVTKGVA-NVPWEGNPTPRVA 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILI---ASIMEEY 160
+ G + IG +N I+L DR + + K Y KI++ EEY
Sbjct: 61 EVYGGMLNA-----IGLQNPGIDLFVDRDIPFLKK--------YDTKIIVNVCGHTTEEY 107
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
++++R+ + +D +E+N SCP+ ++ G A GQ+ +++EEV + A P
Sbjct: 108 I-----DVVERLSDQPVDLLEINISCPN---VKEGGIAFGQNPKMVEEVTKEMKRHAKQP 159
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
V K++PN+TDITE AR A G++ +S INTI M ID+ C + GG S
Sbjct: 160 VIMKLSPNVTDITEMARAAEAGGADALSMINTITG-MKIDIH----RRCFALANRTGGMS 214
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
AVHP+A+ V A+ +K + G+GG++T DA E IL GA V V T
Sbjct: 215 GPAVHPVAVRMVYQSAQAVK-------IPIIGMGGIQTAEDAIEMILAGATAVSVGTANF 267
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
H + + + + ++ +M+ + I + GA
Sbjct: 268 YHPHA-TEEIVDGIRAYMERYQVEDIRELIGA 298
>gi|295425253|ref|ZP_06817956.1| dihydroorotate oxidase [Lactobacillus amylolyticus DSM 11664]
gi|295065029|gb|EFG55934.1| dihydroorotate oxidase [Lactobacillus amylolyticus DSM 11664]
Length = 318
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 168/336 (50%), Gaps = 37/336 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRY 104
++ + + GL + NP + SG G FD GA+V KT + A N P+
Sbjct: 14 NIHVALPGLALKNPLMPASGTFGFGDVPAANKFDLNKLGAMVIKTTT-PQATTGNPQPQI 72
Query: 105 ARLRAGANGSAKGQIIGWENI---ELISDRPLETMLKEFKQLKALYPDKILIASIMEEYN 161
A L G S +G N +ISD+ L +F++ YP+ ++AS+ + +
Sbjct: 73 AVLDDGVLNS-----VGLTNPGVDAVISDK-----LTKFRKK---YPELPIMASVGGD-D 118
Query: 162 KAAWEELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+A + E+ ++ +G ++ +E+N SCP+ + G + G ++E++ I +P
Sbjct: 119 EAGYVEVARKLSASGLVNTLEINVSCPN---VARGGMSFGVHPDVIEDLTKKIKDVVNIP 175
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
++ K+TPN+TDI E A+ A G++G+S INT++ M IDLK+ +P V G++ GG+S
Sbjct: 176 IYVKLTPNVTDIVEIAKAAQAGGADGISMINTVLG-MEIDLKSRKP---VLGHNM-GGFS 230
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
A+ PIA+ +M+ D + G+GG+ET D EF L GA+ V V T
Sbjct: 231 GHAIKPIAI-------RMIAQVHQAVDLPIIGMGGIETAEDVVEFFLAGASAVAVGTA-H 282
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEY 376
H + + L D +K + I D G +E+
Sbjct: 283 FHDALACPHIAQALPDLLKKLHVDDINDLVG-QVEF 317
>gi|297526580|ref|YP_003668604.1| dihydroorotate dehydrogenase family protein [Staphylothermus
hellenicus DSM 12710]
gi|297255496|gb|ADI31705.1| dihydroorotate dehydrogenase family protein [Staphylothermus
hellenicus DSM 12710]
Length = 406
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 172/378 (45%), Gaps = 49/378 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + V GL+M NP + + P + +MK D G GAVVAKT+S+ A + PR
Sbjct: 4 LEVEVAGLKMKNPLMNAACPVSRDAEMMKALIDNGVGAVVAKTISVRPA----IVPR-PS 58
Query: 107 LRAGANGSAKGQII----------------------GWENIELISDRPLETML-KEFKQL 143
+ A G + QI+ N EL SD P E +E+ +
Sbjct: 59 MGAVDRGIVRSQILKTLGPGNIRIVNADSGNYRFIYALLNAELWSDIPAEHYFEREYPMV 118
Query: 144 KALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDC 203
K +K + I Y L + ++ G +AIE FS + +G+D
Sbjct: 119 KKYAEEKSIPFIISIGYKPEELRLLGPKSQKAGANAIE--FSTHY----------IGKDY 166
Query: 204 RLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKT 263
R + E + +P++AK++P +I E + + G +G+ A NTI + ID++T
Sbjct: 167 RPVVEAAKALREVVDIPIFAKLSPFTPNIPELVKELEKVGVDGIVATNTIGPALHIDIET 226
Query: 264 LRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAA 323
P V G + G S A+ P+AL V AK + + G+GG+ G D
Sbjct: 227 GLP--IVGGPNGYGWMSGPALKPLALAVVAEAAK-------NTHLPIIGVGGISKGTDVI 277
Query: 324 EFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
E+ + GA+ VQ+CT ++ G G+ +R+ +E++ ++K H + SI D +G +++Y
Sbjct: 278 EYFMAGASAVQICTAALIEGLGVFRRIEKEIESWLKRHGYDSILDVKGKALKYLKPEPRR 337
Query: 384 VRMQQEAIQQRKAVRKGL 401
V + + RK + G
Sbjct: 338 VWAKPPVVDPRKCIGCGF 355
>gi|395241811|ref|ZP_10418814.1| Dihydroorotate dehydrogenase A (fumarate) [Lactobacillus pasteurii
CRBIP 24.76]
gi|394480825|emb|CCI85054.1| Dihydroorotate dehydrogenase A (fumarate) [Lactobacillus pasteurii
CRBIP 24.76]
Length = 305
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 165/337 (48%), Gaps = 50/337 (14%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRY 104
++ + + GL M NP + SG G + MK AFD E GA V KTV TP+
Sbjct: 3 NIKVNLPGLNMKNPVMPASGTFG--FGDMKYAFDLEELGAFVFKTV----------TPQ- 49
Query: 105 ARLRAGANGSAKGQII---GW--ENIELISDRPLETMLKEFKQLKALYPDKILIASI--- 156
G+ + QI W ++ L + E + + L+ + D ++ASI
Sbjct: 50 -----AGTGNPQPQIFVNQDWIMNSVGLTNPGVDEAIASKMTPLRKQHLDLPMVASIAGG 104
Query: 157 -MEEYNKAAWEELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWIN 214
+E+Y EL +++++ G IDA+EVN SCP+ + G G + +++E+V G I
Sbjct: 105 SIEDY-----VELAEKIDQAGVIDALEVNLSCPN---VAEGGMLFGINSKIVEQVIGQIK 156
Query: 215 AKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYS 274
K + PV+AK+TPN+TDI E AR A G++G+S INT+ + ID+KT +P V G +
Sbjct: 157 QKISRPVYAKLTPNVTDIAEIARAAQSGGADGLSLINTVYG-LEIDIKTRKP---VLG-N 211
Query: 275 TPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQ 334
GG S KAV P+AL +M+ + + G+GG+ + D +F L GA V
Sbjct: 212 NAGGLSGKAVQPVAL-------RMVHEVYEATKLPIIGMGGIYSAEDVVKFFLAGAQAVA 264
Query: 335 VCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ + ++ ++L + I D G
Sbjct: 265 IGSA-HFEDKKAAAKIAQDLPQLLDDLGVKDINDLVG 300
>gi|383319445|ref|YP_005380286.1| dihydroorotate oxidase B, catalytic subunit [Methanocella conradii
HZ254]
gi|379320815|gb|AFC99767.1| dihydroorotate oxidase B, catalytic subunit [Methanocella conradii
HZ254]
Length = 306
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 157/328 (47%), Gaps = 36/328 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L++ GL + NP ++ +G GT +KR G GAVV K+ I V PRY
Sbjct: 3 LTVEAGGLTLQNPTILAAGILGTTGASLKRVASMGAGAVVTKS--------IGVEPRYGH 54
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLK-ALYPDKILIASIMEEYNKAAW 165
N S G+ N + + L+E + + A P +IASI N+A +
Sbjct: 55 ----PNPSMIKLECGYINAMGLPNPSYREFLQELEVARQAGVP---VIASIFGA-NEAEF 106
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+ + + G A E+N SCPH + G +G D L+E V + VPVW K+
Sbjct: 107 REVAEGLP--GASAYELNVSCPHA---KGYGMQLGTDPALVEAVTRAVKGAVDVPVWVKL 161
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+TDIT R A G++ V AINT+ + M ID+ + P + G + GG S A+
Sbjct: 162 TPNVTDITAIGRAAQDGGADAVVAINTVKA-MTIDIDSGYP---ILG-NISGGLSGPAIK 216
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
PIA+ K + + D + G+GG+ DA EF++ GA+ V++ + V G
Sbjct: 217 PIAV-------KCVYELYEALDIPVIGVGGISNWADAVEFLMAGASAVEIGSAV-YDGLE 268
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ + L D+++ N +ED G S
Sbjct: 269 VFASVSMGLSDYLERKNM-KLEDLVGLS 295
>gi|437479726|ref|ZP_20768073.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|435219403|gb|ELO01765.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
Length = 241
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 94/149 (63%), Gaps = 4/149 (2%)
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
AKMTPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS K
Sbjct: 3 AKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGK 62
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
AV PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +
Sbjct: 63 AVKPIALRFIQQL--RMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQY 118
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
GY +V+ + L ++ F+S+++ G
Sbjct: 119 GYRIVEDMASGLSHYLADQGFASLQEMIG 147
>gi|254166940|ref|ZP_04873794.1| dihydroorotate dehydrogenase family protein [Aciduliprofundum
boonei T469]
gi|289596507|ref|YP_003483203.1| dihydroorotate dehydrogenase family protein [Aciduliprofundum
boonei T469]
gi|197624550|gb|EDY37111.1| dihydroorotate dehydrogenase family protein [Aciduliprofundum
boonei T469]
gi|289534294|gb|ADD08641.1| dihydroorotate dehydrogenase family protein [Aciduliprofundum
boonei T469]
Length = 299
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 151/327 (46%), Gaps = 36/327 (11%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + + L + NP ++ SG + M R G G +V K++ +
Sbjct: 2 LDVDIGKLHLKNPLILASGILDESGETMLRIAKNGAGGIVTKSIGKEP------------ 49
Query: 107 LRAGANGSAKGQI-IGWENIELISDRPLETMLKEFKQLK-ALYPDKILIASIMEEYNKAA 164
R G ++ G N + + +E E K K P +I SI N
Sbjct: 50 -REGYENPVVYELPCGLLNAMGLPNPGIENYKDEIKIAKEGGVP---IIGSIFGS-NPEE 104
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
+ L ++E+ G DA+E+N SCPH + G VG D L+EE+ + +PVWAK
Sbjct: 105 FSYLAKKMEDYGADAVELNLSCPHA---KGYGMEVGTDLELVEEIINSVKRAVKIPVWAK 161
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN +I E A+ A ++ INT + M ID+ RP + GG S KA+
Sbjct: 162 LTPNTNNIVEIAKAA--ENADAFVLINT-LKAMAIDIDAKRPVL----KNVFGGLSGKAI 214
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PI + V + + + + + G+GG+E G DA E+I+ GA+ V++ T + G
Sbjct: 215 KPIGVRAVYEV-------YREIEKPIIGVGGIENGRDAIEYIMAGASAVEIGTALYTRGI 267
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ K + +E++++M + +S I D G
Sbjct: 268 EVFKEIAKEIEEWMNENGYSKISDIVG 294
>gi|227530640|ref|ZP_03960689.1| dihydroorotate dehydrogenase 1B [Lactobacillus vaginalis ATCC
49540]
gi|227349421|gb|EEJ39712.1| dihydroorotate dehydrogenase 1B [Lactobacillus vaginalis ATCC
49540]
Length = 305
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 167/332 (50%), Gaps = 41/332 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYA 105
L++ + GL+M NP + SG G R +D GA+V KT +L A + N P+ A
Sbjct: 6 LAVNLPGLKMKNPVMPASGTFGFGDVPQARKYDLNRLGAIVIKTTTLQA-RTGNPQPQIA 64
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
L G S +G N + +++ ++ LK YPD L+ASI A
Sbjct: 65 VLNDGVLNS-----VGLTNPGVNVVAG-------EKIPHLKHQYPDLPLVASI----GGA 108
Query: 164 AWEELI---DRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-T 218
+ E+ + +R+ TG +DA+E+N SCP+ + G A G D ++ E++ + A +
Sbjct: 109 SVEDYVMVTERLAATGLVDALELNISCPN---VKHGGMAFGTDPQVAEKLTKAVKAASGD 165
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VPV+ K+TPN+TDI E A+ G++G+S INT++ M I+LKT +P V G + GG
Sbjct: 166 VPVYVKLTPNVTDIVEIAQAVEAGGADGLSMINTLLG-MKINLKTRKP---VLG-NIMGG 220
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ P+A+ +M+ + + + G GG+ + D EF L GA+ VQV +
Sbjct: 221 LSGTAIKPLAI-------RMIYQVSHAVNIPIIGEGGISSAEDVIEFFLAGASAVQVGSA 273
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
H + + E+L M S+ + R
Sbjct: 274 -HFHDALAMPHIIEQLPQAMARVGIGSLAELR 304
>gi|91201891|emb|CAJ74951.1| similar to dihydroorotate oxidase (dihydroorotate dehydrogenase B)
catalytic subunit [Candidatus Kuenenia stuttgartiensis]
Length = 306
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 166/335 (49%), Gaps = 38/335 (11%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
E LSI + +++ NP V+ SG GT T++KR + G GAV K+VS D+ +
Sbjct: 3 EVTLSINLCSMRLSNPTVLASGILGTTKTLLKRVAESGAGAVTIKSVSKDSRE------- 55
Query: 104 YARLRAGANGSAKGQIIGWE----NIELISDRPLETMLKEFKQLKALYPDKILIASIMEE 159
G +I +E N S+ +E E+ L + +IASI+
Sbjct: 56 ---------GHHNPTVITYEAGMLNAVGYSNPGVEAARIEYSNLNEI--GVPVIASIIGT 104
Query: 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDC-RLLEEVCGWINAKAT 218
+ E+ + + +G AIE+ SCPH G GQ + E+ + K
Sbjct: 105 CTDD-FIEVAEGLSASGFSAIEIPLSCPH---TPGFGLLSGQGTPKATYEITYAVRRKTN 160
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VP++ K++PN+ +IT A+ A +G+ G++A+N++ M I++++ +P V G+ GG
Sbjct: 161 VPIFVKISPNVPEITSIAKAAEDAGANGITAVNSMGPGMVINIESKKP---VLGFKV-GG 216
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
+ A+ PIA+ V + + +K + G+GG+ TG A E ++ GA+ V + TG
Sbjct: 217 VTGDALRPIAVRCVYDVYQAVK-------IPIIGVGGISTGRHAIEMMMAGASAVGIGTG 269
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V G + ++C E+K +M + +++I + G +
Sbjct: 270 VYTRGINVFSKVCAEMKQWMIENGYNTINELVGVA 304
>gi|409349147|ref|ZP_11232692.1| Dihydroorotate oxidase (fumarate) [Lactobacillus equicursoris CIP
110162]
gi|407878419|emb|CCK84750.1| Dihydroorotate oxidase (fumarate) [Lactobacillus equicursoris CIP
110162]
Length = 309
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 169/328 (51%), Gaps = 35/328 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYA 105
+++++ GL++ NP + SG + + FD + GA+V KT + A + N P+ A
Sbjct: 7 MAVSLPGLKLKNPVMPASGT--FAFGDLPENFDWDQMGAIVIKTATRHA-RTGNPKPQIA 63
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
L G + +G N E+++ + + K+ +PD ++AS+ E +
Sbjct: 64 LLEDGVMNA-----VGLTNPGCEVVASEKIPALRKK-------HPDLPIMASVGGESVQD 111
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E+ + + DA+E+N SCP+ + G G ++EE+ + + +PV+
Sbjct: 112 -YLEVAEILASAKPDALELNLSCPN---VSEGGMTFGIVPEMVEEITKKVKERVDIPVYV 167
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K+TPN+TDITE A+ A R G++G++ INT++ + +DLKT RP V G GG S +A
Sbjct: 168 KLTPNVTDITEIAKAAERGGADGLTLINTLLG-LHLDLKTRRP---VLGNDF-GGLSGQA 222
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
V P+A+ V + K + + + G+GG+ + DAAEFIL GA+ VQ+ + + H
Sbjct: 223 VKPVAVRMVAQVKKAV-------NLPIIGVGGINSAEDAAEFILAGASAVQIGS-MAFHD 274
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+K + + L + S + D G
Sbjct: 275 KLAIKHVVDALPGVLAGMGVSDVNDLVG 302
>gi|227892690|ref|ZP_04010495.1| dihydroorotate dehydrogenase 1B [Lactobacillus ultunensis DSM
16047]
gi|227865467|gb|EEJ72888.1| dihydroorotate dehydrogenase 1B [Lactobacillus ultunensis DSM
16047]
Length = 307
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 162/324 (50%), Gaps = 36/324 (11%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGA 111
GL + NP + SG G + FD GA+V KT + A N P+ A L+ G
Sbjct: 10 GLDLKNPVMPASGTFGFGDVPVANKFDLNDLGAMVIKTTTPHATTG-NPQPQIAVLKDGV 68
Query: 112 NGSAKGQIIGWENI---ELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEEL 168
S +G N +ISD+ +L+ YP+ ++AS+ + ++ + E+
Sbjct: 69 LNS-----VGLTNPGVDAVISDK--------LTKLRGKYPNLPIMASVGGD-SEDDYVEV 114
Query: 169 IDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTP 227
++ + ++A+E+N SCP+ + G + G ++EE+ I +P++ K+TP
Sbjct: 115 AKKLSNSKLVNALEINVSCPN---VARGGMSFGVHPDVVEELTRNIKKVVNIPIYVKLTP 171
Query: 228 NITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPI 287
N+TDIT AR A + G++G+S INT++ M ID+KT +P + G++ GG S +A+ PI
Sbjct: 172 NVTDITVIARAAEKGGADGISMINTVLG-MEIDVKTRKP---ILGHNM-GGLSGEAIKPI 226
Query: 288 ALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLV 347
A+ +M+ D + G+GG+E+ D EF+L GAN V V T H
Sbjct: 227 AI-------RMISQVRQATDLPIIGMGGIESAQDVVEFMLAGANAVAVGTA-HFHDELAS 278
Query: 348 KRLCEELKDFMKMHNFSSIEDFRG 371
K + EEL ++ I D G
Sbjct: 279 KHIAEELPQELEKLGIKDINDVVG 302
>gi|406896747|gb|EKD40919.1| hypothetical protein ACD_74C00126G0003 [uncultured bacterium]
Length = 306
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 156/332 (46%), Gaps = 31/332 (9%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
+PDL +T+ L NP + SG G G VV K +SL+ + N PR
Sbjct: 3 QPDLRVTIGSLVFKNPVLTASGTFGYAKEFAPYVNLHHLGGVVVKGISLEPRRG-NPPPR 61
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
G + IG EN+ + DR + + + + IL S +EEY
Sbjct: 62 IVETAGGMLNA-----IGLENVGV--DRFIAEKMDYLRGIGTRVIVNILGDS-LEEY--- 110
Query: 164 AWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
+ L R+ E GI A+EVN SCP+ +K G A G D + E V + A +PV
Sbjct: 111 --QTLAQRLSEVEGISALEVNISCPN---VKKGGVAFGTDPAMAEAVTRAVCAHTALPVI 165
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
K++PN+TDIT A+ G++ VS INT++ M ID+++ RP + GG S
Sbjct: 166 VKLSPNVTDITAIAKAVEAGGAQAVSLINTLLG-MAIDIRSRRPRLA----NIVGGLSGP 220
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ PIAL V +A+ +K + GIGG+ T DA EF+L GA ++V T ++
Sbjct: 221 AIKPIALRMVWQVAQAVK-------IPVIGIGGITTTEDALEFLLAGATAIEVGTANFVN 273
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+ + E L ++ + S I + G I
Sbjct: 274 PKA-SQEIVEGLGRYVTENRLSGIGEVIGGLI 304
>gi|254168949|ref|ZP_04875788.1| dihydroorotate dehydrogenase family protein [Aciduliprofundum
boonei T469]
gi|197622055|gb|EDY34631.1| dihydroorotate dehydrogenase family protein [Aciduliprofundum
boonei T469]
Length = 299
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 151/327 (46%), Gaps = 36/327 (11%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L I + L + NP ++ SG + M R G G +V K++ +
Sbjct: 2 LDIDIGKLHLKNPLILASGILDESGETMLRIAKNGAGGIVTKSIGKEP------------ 49
Query: 107 LRAGANGSAKGQI-IGWENIELISDRPLETMLKEFKQLK-ALYPDKILIASIMEEYNKAA 164
R G ++ G N + + +E E K K P +I SI N
Sbjct: 50 -REGYENPVVYELPCGLLNAMGLPNPGIENYKDEIKIAKEGGVP---IIGSIFGS-NAEE 104
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
+ L ++E+ G DA+E+N SCPH + G VG D L+EE+ + +PVWAK
Sbjct: 105 FSYLAKKMEDYGADAVELNLSCPHA---KGYGMEVGTDLDLVEEIINSVKRAVKIPVWAK 161
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN +I E A+ A ++ INT + M ID+ RP + GG S KA+
Sbjct: 162 LTPNTNNIVEIAKAA--ENADAFVLINT-LKAMAIDIDAKRPVL----KNVFGGLSGKAI 214
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PI + V + + + + + G+GG+E G DA E+++ GA+ V++ T + G
Sbjct: 215 KPIGVRAVYEV-------YREVEKPIIGVGGIENGRDAIEYMMAGASAVEIGTALYTRGI 267
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ K + +E++++M + +S I D G
Sbjct: 268 EVFKEIAKEIEEWMNENGYSKISDIVG 294
>gi|392407684|ref|YP_006444292.1| dihydroorotate dehydrogenase family protein [Anaerobaculum mobile
DSM 13181]
gi|390620820|gb|AFM21967.1| dihydroorotate dehydrogenase family protein [Anaerobaculum mobile
DSM 13181]
Length = 363
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 170/357 (47%), Gaps = 48/357 (13%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+L + + G++ NP +I +GPP NY +KR + G G VV KT+S+ AA V PR
Sbjct: 3 NLKVKIAGMEFENPLIIAAGPPSRNYETIKRMVEGGAGGVVTKTISVKAADV----PRPC 58
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIMEEYNKAA 164
+ K I N EL S+ E LKE + ++ AL P I++ Y
Sbjct: 59 M------AAFKESFI---NTELWSEHSPEHWLKEEYGKISAL-PVPIIVGL---GYTAEE 105
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINA--KATV-PV 221
ELI R E DA E++ VG+D L V + A KAT P+
Sbjct: 106 LTELIPRTEPFA-DAFELSTH------------YVGRD---LTPVLNTVTAARKATKKPI 149
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY-S 280
K++P + D+ E + G + ++AIN++ + IDLKT P G T G+ S
Sbjct: 150 IVKVSPGVPDLAELGKKLEEVGVDALAAINSVGPALRIDLKTGLP---YMGSDTGYGWIS 206
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
A+ IAL V +++ + + G+GGV +G D E + GA+ VQ+CT +
Sbjct: 207 GPAIKGIALRHVFELSRAV-------SIPVIGVGGVSSGEDVVEMFMAGASAVQICTQAI 259
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAV 397
+ G KR+ +E ++ H +SS++D +G + + +++ E + ++ + K +
Sbjct: 260 LEGPKAFKRIAQETSKWLDEHGYSSLDDIKGLTAKKWSSRKEPLVKVTPSVDEEKCI 316
>gi|126465150|ref|YP_001040259.1| dihydroorotate dehydrogenase family protein [Staphylothermus
marinus F1]
gi|126013973|gb|ABN69351.1| dihydroorotate dehydrogenase family protein [Staphylothermus
marinus F1]
Length = 406
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 173/378 (45%), Gaps = 49/378 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + + GL+M NP + + P + +MK D G GAVVAKT+S+ A + PR
Sbjct: 4 LEVEIAGLKMKNPLMNAACPVSRDAEMMKALIDNGVGAVVAKTISVRPA----IVPR-PS 58
Query: 107 LRAGANGSAKGQII----------------------GWENIELISDRPLETML-KEFKQL 143
+ A G + QI+ N EL SD P E +E+ +
Sbjct: 59 MGAVDRGIVRSQILKTFGPGNVRIVNADSGNYRFIYALLNAELWSDIPAEHYFEREYPIV 118
Query: 144 KALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDC 203
K +K + I Y + L + ++ G +AIE FS + +G+D
Sbjct: 119 KKYAEEKGVPFIISIGYKPEELQLLGPKCQKAGANAIE--FSTHY----------IGKDY 166
Query: 204 RLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKT 263
R + E + +P++AK++P +I E + + G +G+ A NTI + ID++T
Sbjct: 167 RPVVEAAKALREVVDIPIFAKLSPFTPNIPELVKELEKVGVDGIVATNTIGPALHIDIET 226
Query: 264 LRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAA 323
P V G + G S A+ P+AL V AK + + G+GG+ G D
Sbjct: 227 GLP--IVGGPNGYGWMSGPALKPLALAVVAEAAK-------NTHLPVIGVGGISKGTDVI 277
Query: 324 EFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTEL 383
E+ + GA+ VQ+CT ++ G G+ +R+ +E++ ++K H + SI D +G +++Y
Sbjct: 278 EYFMAGASAVQICTAALIEGLGVFRRIEKEIESWLKRHGYDSILDVKGKALKYLKPEPRR 337
Query: 384 VRMQQEAIQQRKAVRKGL 401
V + + +K + G
Sbjct: 338 VWAKPPVVDPKKCIGCGF 355
>gi|312621650|ref|YP_004023263.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202117|gb|ADQ45444.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor
kronotskyensis 2002]
Length = 381
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 159/331 (48%), Gaps = 33/331 (9%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
P+LS T L + P ++ S ++R + G GAVV K++ I TPR+
Sbjct: 2 PNLSTTYAKLNLRTPVIVASAGITGTVERLQRCEENGAGAVVTKSLFQKEICRIAPTPRF 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
++ + + +E + + + + KQ K P +IASI Y A
Sbjct: 62 KIVKHENTFT----LYSYEQASEFNPQEYAEFIFKAKQ-KLSIP---VIASI-NCYTDDA 112
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG---WINAKATVPV 221
W E +E+ G DAIE+N SCPHG+ G D ++EE+ + + +PV
Sbjct: 113 WLEYSKLMEQAGADAIELNLSCPHGV-----HIMSGMD--VIEEMVHTTKLVKSNVKIPV 165
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG-YSTPGGYS 280
KMTP T+ P ALR S G + G+D+ + P + G Y+ GG
Sbjct: 166 IPKMTPQSTN---PGFDALRLDSAGADGLVMFNRFTGLDIDIEKEAPILHGGYAGHGG-- 220
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
P A +M + + + S+S GG G D ++IL GA+TVQVCT V+
Sbjct: 221 -----PWA---IMYGLRWISAVSPKVKCSISASGGAMNGEDVVKYILAGASTVQVCTTVI 272
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
++GYG++K++ + L+++M+ +++I+DF+G
Sbjct: 273 LNGYGVIKKINKYLEEYMERKGYNTIDDFKG 303
>gi|213161193|ref|ZP_03346903.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
Length = 238
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 93/148 (62%), Gaps = 4/148 (2%)
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
KMTPNI D+ E A A R G++G++ INT+ S+ IDL P V G S+ GYS KA
Sbjct: 1 KMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKA 60
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
V PIAL + + M E +D+ +SGIGG+ET DAAEF+LLGA T+QV TG+M +G
Sbjct: 61 VKPIALRFIQQL--RMHPEL--RDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYG 116
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
Y +V+ + L ++ F+S+++ G
Sbjct: 117 YRIVEDMASGLSHYLADQGFASLQEMIG 144
>gi|308273129|emb|CBX29732.1| Dihydroorotate dehydrogenase [uncultured Desulfobacterium sp.]
Length = 305
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 161/329 (48%), Gaps = 29/329 (8%)
Query: 43 AEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTP 102
++ DL + + G+++ NP + SG G GA++ K +SL+ ++ N P
Sbjct: 2 SKTDLRVDIGGIKLKNPVMTASGTFGYAQEFEPYIDLNRIGAIIVKGLSLEPSRG-NKPP 60
Query: 103 RYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNK 162
R G + IG ENI + + + +L K + I SI +EY+
Sbjct: 61 RIVETPCGMLNA-----IGLENIGI--NNFINKVLPFLKTISTPTIVNIYGTSI-DEYSL 112
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
A E+ID +EE I IEVN SCP+ K G A G + + +V + K + P+
Sbjct: 113 LA--EMIDDIEE--ISGIEVNISCPN---VEKGGVAFGVNPKAAYKVTKAVRKKTSKPLM 165
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
K++PN+TDITE A A +G++ +S INTI M ID+KT R + GG S
Sbjct: 166 VKLSPNVTDITEIALSAADAGADSLSLINTITG-MSIDIKTRRSRLA----NITGGLSGP 220
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ PIAL V +AK + D + G+GG+ T DA EFI+ GA VQ+ T ++
Sbjct: 221 AIKPIALRMVWQVAKKV-------DIPVVGVGGIFTADDAIEFIIAGATAVQIGTANFIN 273
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
++ + + ++DF+ N + + G
Sbjct: 274 PRATIE-VIKGIEDFLTDRNIPRVTELVG 301
>gi|257075749|ref|ZP_05570110.1| dihydroorotate dehydrogenase 1B [Ferroplasma acidarmanus fer1]
Length = 298
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 163/332 (49%), Gaps = 37/332 (11%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
+PD+ G+ NPF++ SG N +KR + G GA V K++ + K +
Sbjct: 4 KPDI-----GIGAANPFILASGILDANGYTIKRILENGAGAAVTKSIGSEERKGFDPPVI 58
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
Y+ R+ N IG +S+ +E +E K A K +I SI +
Sbjct: 59 YSDGRSVINA------IG------LSNPGIENYGQEIKI--ATSSGKPVIGSIFGQ-TPE 103
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ L ++++ G A+E+N SCPH + G +G D L+ + + ++ +PV+A
Sbjct: 104 EFAMLAEKMQAYGASAVELNLSCPH---VKGYGTEIGSDPELVSAIVSAVKSRINIPVYA 160
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN +D+ A A ++ +G INTI + M ID+ T + + GG S K+
Sbjct: 161 KLSPNTSDMLGQAIAAGKA--DGYVLINTIKA-MKIDINTGKAVLS----NIYGGLSGKS 213
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ P+ + V + K + ++ G+GG+ DA E+I+ GA+ VQ+ + + G
Sbjct: 214 IKPVGIRYVYEVKK-------ETGKTIIGVGGINNFEDALEYIMAGASAVQIGSAISQAG 266
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
G+ L +EL+ +M+ ++ +IE+ G +IE
Sbjct: 267 IGIFANLTKELESYMEANSIDNIEELVGVAIE 298
>gi|238019709|ref|ZP_04600135.1| hypothetical protein VEIDISOL_01584 [Veillonella dispar ATCC 17748]
gi|237863750|gb|EEP65040.1| hypothetical protein VEIDISOL_01584 [Veillonella dispar ATCC 17748]
Length = 317
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 167/341 (48%), Gaps = 41/341 (12%)
Query: 38 SDSASAEPDLSITVNGLQMPNPFV-----IGSGPPGTNYTVMKRAFDEGWGAVVAKTVSL 92
+++ + P L++ G++M NP + G+GP Y + GA+ K ++
Sbjct: 7 NNTVTPNPKLAVDYCGIKMKNPIIAASGTFGNGPEYAGYLDLSNEV----GAISVKGLT- 61
Query: 93 DAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKIL 152
+ N PR A +G IG EN ++ + +L + K+ D L
Sbjct: 62 PKGRHGNPGPRIAETPSGVL-----NCIGLENPG--AEHFVTDILPDLKKY-----DVPL 109
Query: 153 IASIME-EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211
+A++ ++ AW + + + GI +EVN SCP+ E G A G D +++E+V
Sbjct: 110 LANMSAGTIDEFAW--MAETLSVDGIAGLEVNVSCPNVECE---GMAFGVDPKVVEQVTK 164
Query: 212 WINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVE 271
+ PV K++PN+TDI E A+ G +GVS INTI+ M ID+ +P V
Sbjct: 165 AVRKVTDKPVIVKLSPNVTDIVEIAKAVEAGGGDGVSLINTILG-MAIDIHRRKP---VL 220
Query: 272 GYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 331
G + GG S AV P+AL +M+ + + + G+GG+ TG DA EF++ GA
Sbjct: 221 G-NIYGGLSGPAVKPVAL-------RMVHQVYKGVNIPIMGLGGIMTGTDAIEFMMAGAQ 272
Query: 332 TVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
VQV T M+ + R+ E+ D+++ +N +SI D GA
Sbjct: 273 AVQVGTATMVDPTA-ISRIAREMGDYVEQYNLNSITDIVGA 312
>gi|429205225|ref|ZP_19196502.1| dihydroorotate dehydrogenase catalytic subunit [Lactobacillus
saerimneri 30a]
gi|428146297|gb|EKW98536.1| dihydroorotate dehydrogenase catalytic subunit [Lactobacillus
saerimneri 30a]
Length = 315
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 164/332 (49%), Gaps = 44/332 (13%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYA 105
L++ + GL++ NP + SG + + +D GA++ K V+L+ + N TPR A
Sbjct: 6 LAVELPGLKLKNPIMPASGTFAFGDSKYAQMYDLNQLGALITKAVTLEP-RAGNATPRIA 64
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEY 160
++G + IG +N L+ +L+E L+A YPD +IA++ EEY
Sbjct: 65 ETKSGVLNA-----IGLQN------PGLKVVLEEKLPALQAKYPDLPIIANVAGSTEEEY 113
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKA 217
A E A+E+N SCP HG G G + + E+ + +
Sbjct: 114 VAVARA----LSESKMCSALELNISCPNVKHG------GMMFGTNPDVAAELTAAVKKAS 163
Query: 218 TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277
+VPV+ K++PN+TD+ E A+ +G++G+S INT++ M +DLKT +P V T G
Sbjct: 164 SVPVYVKLSPNVTDVKEIAQAVADAGADGLSMINTLLG-MRLDLKTRKP---VLANQT-G 218
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
G S A+ PIA+ + +A + D + G+GGVET DA E ++ GA+ V V T
Sbjct: 219 GLSGPAIKPIAVRMIREVAAAI-------DIPIIGMGGVETAADALEMMMAGASAVAVGT 271
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDF 369
H + + + L M + S++++
Sbjct: 272 A-HFHDPLVCPHIIDALPKTMDQYQVSTLQEL 302
>gi|401680376|ref|ZP_10812296.1| dihydroorotate oxidase [Veillonella sp. ACP1]
gi|400218701|gb|EJO49576.1| dihydroorotate oxidase [Veillonella sp. ACP1]
Length = 315
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 166/344 (48%), Gaps = 47/344 (13%)
Query: 38 SDSASAEPDLSITVNGLQMPNPFV-----IGSGPPGTNYTVMKRAFDEGWGAVVAKTVSL 92
+++ + P L+I G++M NP + G+GP Y + GA+ K ++
Sbjct: 7 NNTVTPNPKLAIDYCGIKMKNPIIAASGTFGNGPEYAGYLDLSNEV----GAISVKGLT- 61
Query: 93 DAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKIL 152
+ N PR A +G IG EN ++ + +L E K+ D L
Sbjct: 62 PKGRHGNPGPRIAETPSGVL-----NCIGLENPG--AEHFVTDILPELKKY-----DVPL 109
Query: 153 IASI----MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEE 208
+A++ +EE+ AW + + + GI +EVN SCP+ E G A G D +++E+
Sbjct: 110 LANMSAGTVEEF---AW--MAETLSVDGIAGLEVNVSCPNVESE---GMAFGVDPKVVEQ 161
Query: 209 VCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEP 268
V + PV K++PN+TDI E A+ G GVS INT++ M ID+ R +P
Sbjct: 162 VTKAVRKVTDKPVIVKLSPNVTDIVEIAKAVEAGGGNGVSLINTLLG-MAIDIH--RRKP 218
Query: 269 CVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILL 328
+ GG S AV P+AL +M+ + + G+GG+ +G DA EF++
Sbjct: 219 LLGNIY--GGLSGPAVKPVAL-------RMVHQVYKGVTIPIIGLGGIMSGTDAIEFMMA 269
Query: 329 GANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
GA VQV T M+ + R+ E+ DF++ +N +SI D GA
Sbjct: 270 GAQAVQVGTATMVDPTA-ISRIAREMGDFVEQYNLNSITDIVGA 312
>gi|418257080|ref|ZP_12880789.1| dihydroorotase dehydrogenase family protein [Shigella flexneri
6603-63]
gi|397897550|gb|EJL13957.1| dihydroorotase dehydrogenase family protein [Shigella flexneri
6603-63]
Length = 142
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 87/143 (60%), Gaps = 5/143 (3%)
Query: 176 GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEP 235
G D IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKMTPNI D+ E
Sbjct: 5 GADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEV 63
Query: 236 ARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSI 295
A A R G++G++AINT+ S+ IDL P V G S+ GYS KAV PIAL
Sbjct: 64 ALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIAL----RF 119
Query: 296 AKMMKSEFNDKDYSLSGIGGVET 318
+ M++ +D+ +SGIGG+ET
Sbjct: 120 IQQMRTHPELRDFPISGIGGIET 142
>gi|134299542|ref|YP_001113038.1| dihydroorotate dehydrogenase 1B [Desulfotomaculum reducens MI-1]
gi|189038438|sp|A4J560.1|PYRDB_DESRM RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|134052242|gb|ABO50213.1| dihydroorotate oxidase B, catalytic subunit [Desulfotomaculum
reducens MI-1]
Length = 304
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 158/329 (48%), Gaps = 31/329 (9%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+L++ + L M NP SG G GA+V K +L+ + N TPR
Sbjct: 4 NLAVKIGQLDMINPVTTASGTFGYGQEYSPYVDLNQLGAIVVKGTTLEPREG-NPTPRLV 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+G S IG +N + D LE + FK+L+ I + EEY
Sbjct: 63 ETPSGILNS-----IGLQNSGV--DYLLEHYVPFFKKLQTNVIVNIS-GNTAEEYG---- 110
Query: 166 EELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
+L R++E GI A+EVN SCP+ +K G A G D R EV + +PV K
Sbjct: 111 -QLAARLDEADGIAALEVNISCPN---VKKGGMAFGGDFRTAAEVTKVVKNSTALPVIVK 166
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
++PN+TDI E AR +G++G+S INT++ M ID++ +P V G +T GG S AV
Sbjct: 167 LSPNVTDIAEIARAVEGAGADGLSVINTLLG-MAIDVRKRKP---VLG-NTMGGLSGPAV 221
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
P+AL V + K + + G+GG+ DA EFIL GA V V T ++ Y
Sbjct: 222 KPVALRAVWQVYKAVH-------IPIIGMGGIMNATDALEFILAGAQAVSVGTANFVNPY 274
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
K + + ++ ++ + I + GA+
Sbjct: 275 A-TKEIIQGMEKYLMENGIGDINELVGAA 302
>gi|150391898|ref|YP_001321947.1| dihydroorotate dehydrogenase 1B [Alkaliphilus metalliredigens QYMF]
gi|189038413|sp|A6TVS0.1|PYRDB_ALKMQ RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|149951760|gb|ABR50288.1| dihydroorotate dehydrogenase family protein [Alkaliphilus
metalliredigens QYMF]
Length = 302
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 165/330 (50%), Gaps = 36/330 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
++ + + G+++ NP + SG G+ + GAVV K V+ + K N +PR A
Sbjct: 5 NMKVNIAGVELKNPVMTASGTFGSGREYGEYVDLNQLGAVVVKGVANEPWKG-NPSPRIA 63
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILI---ASIMEEYNK 162
G S +G +N + D +E + +Q Y KI++ +E+Y
Sbjct: 64 ETYGGMLNS-----VGLQNPGV--DEFIEKDIPFLRQ----YNTKIIVNIAGRTIEDYC- 111
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
E++ ++ + +D +E+N SCP+ + G G D ++EEV + A P+
Sbjct: 112 ----EVVKKLGDADVDLLELNISCPN---VKAGGVCFGTDPFMVEEVTKAVKKVAKQPLI 164
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
K+TPN+TDI A+ A+ G++G+S INT++ M ID+ +P + GG+S
Sbjct: 165 VKLTPNVTDIVPIAKAAVAGGADGISLINTLLG-MAIDIHKRKPILA----NVMGGFSGP 219
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ P+AL V +A N D + G+GG+ TG DA EFIL GA+ V V T ++
Sbjct: 220 AIKPVALRMVYQVA-------NAVDVPIIGMGGIMTGEDAVEFILAGASGVAVGTANFIN 272
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
+ + E ++ +M+ ++ +++ RG+
Sbjct: 273 PRATID-VIEGIQGYMEQYSIKDLKEIRGS 301
>gi|222530053|ref|YP_002573935.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor
bescii DSM 6725]
gi|222456900|gb|ACM61162.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor
bescii DSM 6725]
Length = 381
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 158/331 (47%), Gaps = 33/331 (9%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
P+LS T L + P ++ S ++R + G GAVV K++ I TPR+
Sbjct: 2 PNLSTTYAKLNLRTPVIVASAGITGTVERLQRCEENGAGAVVTKSLFQKEICRIAPTPRF 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
++ + + +E + + + + KQ K P +IASI Y A
Sbjct: 62 KIVKHENTFT----LYSYEQASEFNPQEYAEFIFKAKQ-KLSIP---VIASI-NCYTDDA 112
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG---WINAKATVPV 221
W E +E+ G DAIE+N SCPHG+ G D ++EE+ + + +PV
Sbjct: 113 WLEYSKLMEQAGADAIELNLSCPHGV-----HIMSGMD--VIEEMVNTTKLVKSNVKIPV 165
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG-YSTPGGYS 280
KMTP T+ P ALR S G + G+D+ + P + G Y+ GG
Sbjct: 166 IPKMTPQSTN---PGSDALRLDSAGADGLVMFNRFTGLDIDIEKEAPILHGGYAGHGG-- 220
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
P A +M + + + S+S GG G D ++IL GA+ VQVCT V+
Sbjct: 221 -----PWA---IMYGLRWISAVSPKVKCSISASGGAMNGEDVVKYILAGASAVQVCTTVI 272
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
++GYG++K++ + L+++M+ +++I+DF+G
Sbjct: 273 LNGYGVIKKINKYLEEYMERKGYNTIDDFKG 303
>gi|167772620|ref|ZP_02444673.1| hypothetical protein ANACOL_04001 [Anaerotruncus colihominis DSM
17241]
gi|167665098|gb|EDS09228.1| 4Fe-4S binding domain protein [Anaerotruncus colihominis DSM 17241]
Length = 371
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 157/319 (49%), Gaps = 38/319 (11%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
LS+ G+ + NP ++ +GP + ++++ D G AVV +T++L+A+ V PR +
Sbjct: 3 LSVQFLGMTLKNPVIVAAGPWSCDAAAIQKSIDAGAAAVVTETITLEAST--RVCPRLYQ 60
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
G + N L S LE +E K++ D ILI S+ ++
Sbjct: 61 --------HGGSLF---NTMLYSTIDLEQWEQEIKRIDK--RDSILICSVWGA-TESETA 106
Query: 167 ELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINA---KATVPVWA 223
+ +VE G DAIE++ S P G + G R E++ G++ A +PV
Sbjct: 107 YIAKKVERLGADAIELSISAPIGTRSTRFG-------RSQEQIGGYVRAVVEAVDLPVMV 159
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++ + + ++G++ +SAI+++ + G+D++ P T GGYS
Sbjct: 160 KLSYDASANVAFVHAVEQAGAQAISAIDSLKGLAGVDIEHGMPL-----MPTCGGYSGAN 214
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ P+AL ++A++ + E + GIGG+E+ E+++LGAN VQ+ + V++ G
Sbjct: 215 LRPVALATTATLAQLTRCE-------ICGIGGIESYEHVLEYVMLGANAVQLASTVLLAG 267
Query: 344 YGLVKRLCEELKDFMKMHN 362
Y + R+ +L+ + HN
Sbjct: 268 YERITRIVSDLRAWTDAHN 286
>gi|210608869|ref|ZP_03288033.1| hypothetical protein CLONEX_00212 [Clostridium nexile DSM 1787]
gi|210152855|gb|EEA83861.1| hypothetical protein CLONEX_00212 [Clostridium nexile DSM 1787]
Length = 300
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
++ + + G++ NP + SG G+ + GAV K V+ + N TPR A
Sbjct: 2 NMKVNIAGVEWNNPVTVASGTFGSGAEFAEFVDLNRLGAVTTKGVA-NIPWAGNPTPRVA 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILI---ASIMEEY 160
G + +G +N IEL +R + LK+ Y KI++ E+Y
Sbjct: 61 ETYGGMMNA-----VGLQNPGIELFCERDIP-FLKQ-------YDTKIIVNVCGKSTEDY 107
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
E+++R+ + G+D +E+N SCP+ ++ G A GQ+ + EE+ + A P
Sbjct: 108 C-----EVVERLADEGVDMLEINISCPN---VKEGGIAFGQNAKAAEEITKAVKKYAKQP 159
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
V K++PN+TDI E A+ G++ +S INT+ M ID+ + V T GG S
Sbjct: 160 VIMKLSPNVTDIAEMAKAVEAGGADAISLINTLTG-MKIDINRRK---FVLANKT-GGVS 214
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
A+HPIA+ +M+ F+ + G+GG+ + DA E IL GA+ V V T
Sbjct: 215 GPAIHPIAV-------RMVYQAFHAVKVPIIGMGGIASAEDAIEMILAGASAVSVGTA-N 266
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
H + + + ++D+MK + F+S+ + G
Sbjct: 267 FHNPSVTMEIVDGIQDYMKQYGFTSVNEMVG 297
>gi|85859164|ref|YP_461366.1| dihydroorotate dehydrogenase, catalytic subunit [Syntrophus
aciditrophicus SB]
gi|85722255|gb|ABC77198.1| dihydroorotate dehydrogenase, catalytic subunit [Syntrophus
aciditrophicus SB]
Length = 330
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 156/328 (47%), Gaps = 29/328 (8%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
EP L++ + GL++ NP + SG G GAV+ K +SL+ + N PR
Sbjct: 27 EPRLAVDIGGLRLCNPVMTASGTFGYGEEYAPFVDLNRLGAVIVKGLSLEP-RAGNPPPR 85
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
A G + IG +NI + + +E L K I ++EY K
Sbjct: 86 LAETPCGMLNA-----IGLQNIGVRAF--VEQKLPFLKDFTTAVIANIF-GETLDEYEKV 137
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
A E++ G+ A+EVN SCP+ +K G A G D + EV G + +PV
Sbjct: 138 A--EIL--TAAGGVAALEVNISCPN---VKKGGIAFGADPEMAAEVTGRVKQSTNLPVIM 190
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+TDI+ A +G++ VS INT+ M +D++ +P Y+ GG S A
Sbjct: 191 KLSPNVTDISAIAESVEAAGADAVSLINTLTG-MSVDVERRKPHL----YNMTGGLSGPA 245
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
V P+AL V +A ++ + G+GG+ T DA EF+++GA VQV T +
Sbjct: 246 VKPVALRMVWQVASRVQ-------IPVIGLGGIMTANDALEFLIVGAKAVQVGTANFVDP 298
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+K L + + +++ H S I + G
Sbjct: 299 RATMKIL-DGMTHYLRKHKLSDISELIG 325
>gi|452076861|gb|AGF92838.1| dihydroorotate dehydrogenase family protein [uncultured organism]
Length = 303
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 165/333 (49%), Gaps = 45/333 (13%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAK------VINV 100
+ +++ GL+ P+P ++ SG GT+ + +A G G V K++ L+ + V+ V
Sbjct: 7 IEVSLLGLEFPSPVLLASGVLGTSPGGLNKAARAGAGGVTTKSLGLNPREGHPLPAVVEV 66
Query: 101 TPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
Y N E ++ IS R + L L ++Y S +++
Sbjct: 67 EGGYLNAMGLPNPGV------GEFVDEISSREIPVPL-----LGSIY------GSNADQF 109
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+ A EL +V D IE+N SCPHG + G+ VG L+E++ + +P
Sbjct: 110 VRVAG-ELAPQV-----DVIELNLSCPHG---GEYGSTVGTKPSLVEDITTDVKEMVDLP 160
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
V AK+TPN++DITE + A + G++GV A+NT +S M ID++T RP + G + GG S
Sbjct: 161 VLAKLTPNVSDITEMGKAAEQGGADGVVAVNT-LSGMAIDIETRRP---ILGNES-GGLS 215
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
+HP+A+ V + + + G+GGV+ G E +L GA+ V + T ++
Sbjct: 216 GPGIHPVAVAAVYDL-------YESLSIPILGMGGVDDGRALVEMMLAGASLVGLGTAII 268
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
G + L E L+ +++ ++ +ED GA+
Sbjct: 269 TEGMDVFADLNEFLRRYLERNDL-DLEDMVGAA 300
>gi|154500487|ref|ZP_02038525.1| hypothetical protein BACCAP_04159 [Bacteroides capillosus ATCC
29799]
gi|150270718|gb|EDM98014.1| dihydroorotate dehydrogenase 1B [Pseudoflavonifractor capillosus
ATCC 29799]
Length = 340
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 153/331 (46%), Gaps = 38/331 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+T+ G+ M NP V+ SG G K G + K ++ A + N PR A
Sbjct: 40 DMSVTLAGMTMKNPIVVASGTFGFGREYGKLYDISRLGGICVKGLT-PARREGNPAPRIA 98
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM----EEYN 161
G S +G +N + D +E L K + D +IA+I E+Y
Sbjct: 99 ETPMGMLNS-----VGLQNPGV--DAFIEHELPRLKDI-----DIRIIANISGNTPEDYG 146
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
+ +++ G+D IEVN SCP+ + G A G L EV +TVPV
Sbjct: 147 V-----MCEKLSAAGVDMIEVNISCPN---VKAGGLAYGTRPELAAEVTEEAKKHSTVPV 198
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
K++PN+TDITE AR +G++ +S INTI M IDLKT RP + +T GG S
Sbjct: 199 MVKLSPNVTDITEIARAVEGAGADAISLINTIRG-MRIDLKTRRP---ILKMNT-GGLSG 253
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+A+ V +A +K + G+GGV G DAAE +L GA V V
Sbjct: 254 PAVFPVAVRMVWEVANAVK-------VPVLGMGGVSNGRDAAEMMLAGATAVSVGAACFA 306
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
Y VK + +EL S + GA
Sbjct: 307 DPYAPVKTV-DELAKIAAEQGLSHVSQLTGA 336
>gi|385825833|ref|YP_005862175.1| dihydroorotate dehydrogenase [Lactobacillus johnsonii DPC 6026]
gi|417837483|ref|ZP_12483721.1| dihydroorotate dehydrogenase, catalytic subunit [Lactobacillus
johnsonii pf01]
gi|329667277|gb|AEB93225.1| dihydroorotate dehydrogenase [Lactobacillus johnsonii DPC 6026]
gi|338761026|gb|EGP12295.1| dihydroorotate dehydrogenase, catalytic subunit [Lactobacillus
johnsonii pf01]
Length = 307
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 152/288 (52%), Gaps = 31/288 (10%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGA 111
GL + NP + SG G + FD GA+V KT + + N P+ A L G
Sbjct: 10 GLDLKNPIMPASGTFGFGDVPAAKKFDLNDLGAMVIKTTT-PHSTTGNPQPKIAVLNTGV 68
Query: 112 NGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIMEEYNKAAWEELID 170
S +G N ++ ++K+ L+ YPD ++AS+ E ++A + E+
Sbjct: 69 LNS-----VGLTN------PGVDAVIKDKLTPLRNEYPDLPIMASVGGE-DEAGYLEVAK 116
Query: 171 RVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNI 229
++ ++G ++A+E+N SCP+ + G + G ++EE+ I + +P++ K+TPN+
Sbjct: 117 KLSDSGLVNALEINVSCPN---VNQGGMSFGVHPDVVEELTKKIKSVVKIPIYVKLTPNV 173
Query: 230 TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL 289
TDIT+ A+ A G++G+S INT++ M ID++T +P V G++ GG S +AV PIA+
Sbjct: 174 TDITQIAKAAENGGADGLSLINTLLG-MEIDVETRKP---VLGHNI-GGLSGEAVKPIAI 228
Query: 290 GKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
+M+ + G+GG+ + D EFIL GAN V V T
Sbjct: 229 -------RMVHQVRESTTLPIIGMGGISSAKDVIEFILAGANAVAVGT 269
>gi|161528898|ref|YP_001582724.1| dihydroorotate dehydrogenase family protein [Nitrosopumilus
maritimus SCM1]
gi|160340199|gb|ABX13286.1| dihydroorotate dehydrogenase family protein [Nitrosopumilus
maritimus SCM1]
Length = 303
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 156/328 (47%), Gaps = 31/328 (9%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
EP+L+ ++ +Q+ P ++ SG G + V R + G GAVV K++S + + P
Sbjct: 2 EPNLATSIGPIQLDRPVMLASGILGISLDVFSRLYRSGAGAVVTKSLSTEPWEGYP-NPT 60
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
++ G GW N +S+ E K + + + L+ SI E++
Sbjct: 61 IFSVKGG----------GWINAVGLSNPGAENFAKMIEPNQDVPIIVSLVGSIPEDF--- 107
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
E++I + E + A E+N SCPH K+G VG D L++++ + VPV A
Sbjct: 108 --EKMIKQFENCKVTAYELNLSCPH---VAKVGLEVGDDPELVKKIVTTVKNSTNVPVIA 162
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K+ T A+ SG + ++AINT+ S M ID++T RP + GG S
Sbjct: 163 KVGLGTTHYLNTVGTAIESGIDAITAINTVRS-MAIDVETQRPILS----NKFGGLSGTP 217
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ PIAL V I+ + D + G GG+ T DA EF L GA++VQ+ + + +
Sbjct: 218 IKPIALRCVYEIS-------SKYDIPIIGCGGISTWEDAVEFFLAGASSVQLGSAIGDNW 270
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ + + +M+ N+S IE+ G
Sbjct: 271 IDVFNEINTGILQYMEKKNYSKIEEMIG 298
>gi|320527188|ref|ZP_08028374.1| dihydroorotate dehydrogenase 1B [Solobacterium moorei F0204]
gi|320132379|gb|EFW24923.1| dihydroorotate dehydrogenase 1B [Solobacterium moorei F0204]
Length = 306
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 163/337 (48%), Gaps = 42/337 (12%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
E + + ++GL + NP + SG G + G++ K ++ K N PR
Sbjct: 2 EVNTKVNLSGLILDNPVIPASGTFGFGKEYVDFYDINILGSISIKGTTVQRRKG-NPQPR 60
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI----MEE 159
A +G S + G EN+ + KE K L+ +Y K +IA+I +EE
Sbjct: 61 IAECYSGLINSVGLENPGMENV----------IQKELKDLEMIY-RKPVIANISGFSVEE 109
Query: 160 YNKAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAK 216
Y A E +D+V+ GI IEVN SCP HG G A G + + E+ I
Sbjct: 110 YVTLARE--MDQVDNVGI--IEVNISCPNVDHG------GLAFGTNANNVRELTKKIKEV 159
Query: 217 ATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTP 276
T PV+ K++PN+TDI E AR A G++G+S INT+M M ID+ R +P + +
Sbjct: 160 TTKPVYMKLSPNVTDIKEIARAAQEGGADGISLINTLMG-MRIDIN--RRKPVIA--NKK 214
Query: 277 GGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336
GG+S A+ P+AL +M+ + + + GIGG+ + D E ++ GA VQ+
Sbjct: 215 GGFSGPAIFPVAL-------RMVYEVYEVTNLPIIGIGGISSAEDVIEMMMAGATAVQIG 267
Query: 337 TGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+++ K + EEL MK +S+++ G +
Sbjct: 268 AANLINPMA-CKEIIEELPLVMKKLGITSLDEIIGTA 303
>gi|167766247|ref|ZP_02438300.1| hypothetical protein CLOSS21_00750 [Clostridium sp. SS2/1]
gi|317497599|ref|ZP_07955917.1| dihydroorotate dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
gi|167712074|gb|EDS22653.1| dihydroorotate dehydrogenase 1B [Clostridium sp. SS2/1]
gi|291559871|emb|CBL38671.1| dihydroorotate dehydrogenase (subfamily 1) family protein
[butyrate-producing bacterium SSC/2]
gi|316895158|gb|EFV17322.1| dihydroorotate dehydrogenase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 300
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 165/328 (50%), Gaps = 34/328 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+LS+ + G+ M NP GSG G+ + GAV K V+ + N PR A
Sbjct: 2 NLSVDIAGVTMKNPVTTGSGTFGSGEEFSEFVDLSKLGAVTTKGVA-NVPWPGNSVPRVA 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ G + IG +N I++ +R + + K +I ++ + K
Sbjct: 61 EVYGGMLNA-----IGLQNPGIDVFVERDIPYLKKA---------GATIIVNVCGKSEKD 106
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E+++R+ + +D +E+N SCP+ ++ G A GQD + L ++ + AKA P+
Sbjct: 107 -YLEVVERLADQPVDLLEINVSCPN---VKEGGIAFGQDPKALYDITKAVKAKAKQPIIM 162
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+TDITE A+ A+ +GS+ +S INT+ M ID++ R + + + GG S A
Sbjct: 163 KLSPNVTDITEMAKAAVDAGSDALSLINTLTG-MKIDIE--RRDFVLANKT--GGMSGPA 217
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ P+A+ V +A N D + G+GG+ T DA EFI+ GA V V T ++
Sbjct: 218 IKPVAVRMVYQVA-------NAVDVPIIGMGGISTAEDALEFIMAGATAVSVGTANFINP 270
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
++ + + +K +M+ H + I + G
Sbjct: 271 ATTLE-VVDGIKTYMERHQINDINELIG 297
>gi|429761551|ref|ZP_19293975.1| dihydroorotate oxidase, catalytic subunit [Anaerostipes hadrus DSM
3319]
gi|429183545|gb|EKY24591.1| dihydroorotate oxidase, catalytic subunit [Anaerostipes hadrus DSM
3319]
Length = 300
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 165/328 (50%), Gaps = 34/328 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+LS+ + G+ M NP GSG G+ + GAV K V+ + N PR A
Sbjct: 2 NLSVDIAGVTMKNPVTTGSGTFGSGEEFSEFVDLSKLGAVTTKGVA-NVPWPGNPVPRVA 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ G + IG +N I++ +R + + K +I ++ + K
Sbjct: 61 EVYGGMLNA-----IGLQNPGIDVFVERDIPYLKKA---------GATIIVNVCGKSEKD 106
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E+++R+ + +D +E+N SCP+ ++ G A GQD + L ++ + AKA P+
Sbjct: 107 -YLEVVERLADQPVDLLEINVSCPN---VKEGGIAFGQDPKALYDITKAVKAKAKQPIIM 162
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+TDITE A+ A+ +GS+ +S INT+ M ID++ R + + + GG S A
Sbjct: 163 KLSPNVTDITEMAKAAVDAGSDALSLINTLTG-MKIDIE--RRDFVLANKT--GGMSGPA 217
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ P+A+ V +A N D + G+GG+ T DA EFI+ GA V V T ++
Sbjct: 218 IKPVAVRMVYQVA-------NAVDVPIIGMGGISTAEDALEFIMAGATAVSVGTANFINP 270
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
++ + + +K +M+ H + I + G
Sbjct: 271 ATTLE-VVDGIKTYMERHQINDINELIG 297
>gi|302336924|ref|YP_003802130.1| dihydroorotate dehydrogenase [Spirochaeta smaragdinae DSM 11293]
gi|301634109|gb|ADK79536.1| dihydroorotate dehydrogenase family protein [Spirochaeta
smaragdinae DSM 11293]
Length = 834
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 166/345 (48%), Gaps = 46/345 (13%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S + G++M +PF++ SGP + A G GAVV KT+ L+AA IN TP
Sbjct: 11 DISCELCGIRMQSPFILSSGPLSYAAEGLIEAHKAGAGAVVTKTIRLNAA--INPTPHIG 68
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETML-KEFKQLKALYPDKILIASIMEEYNKAA 164
+ + +I N E +D P E +E KA ++IASI +A
Sbjct: 69 IVN-------EDSLI---NCEKWADSPPEVWFEREIPMTKAA--GAVVIASIGHTLPEA- 115
Query: 165 WEELIDRVEETGIDAIE-VNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
E L+ R E G D IE V+++ +P M A + + ++PV
Sbjct: 116 -EALVKRAEAAGADMIELVSYTEDTLLP---MLVATKE--------------RVSIPVIC 157
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPE-PCVEGYSTPGGYSCK 282
K++ N D AR L G++ +SAI+++ + ID++ RPE +GY G S
Sbjct: 158 KLSGNWPDPVGTARKCLEKGADAISAIDSLGPTLKIDIQNARPEMNSADGY---GWLSGA 214
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ P+A+ V IA+ S+ L GIGG+ DA E+++ GA + +C+ +++H
Sbjct: 215 AMRPVAMRIVSEIARNGCSQ-------LVGIGGIGKAEDAVEYVMAGAQALGICSSLIIH 267
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQ 387
G + +LC +L + ++S+ +G ++ F T + +++
Sbjct: 268 GMDYLNKLCHDLSVLLDQLGYASLAKAKGIALPNFPTAERVAKLE 312
>gi|325913770|ref|ZP_08176131.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners UPII 60-B]
gi|325476970|gb|EGC80121.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners UPII 60-B]
Length = 306
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 165/327 (50%), Gaps = 30/327 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYA 105
L++ + GL + NP + SG G + +D GA+V KT +L A ++ N P+ A
Sbjct: 4 LNVKLPGLNLKNPIMPASGTFGFGDVPQAKKYDLNEMGAMVFKTTTLHA-RIGNPQPQIA 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ G S +G N + D+ + + FK+ YP LIAS+ + +
Sbjct: 63 VMKNGVLNS-----VGLTNPGV--DKVISDKIAPFKEQ---YPQLPLIASVGGS-QISDY 111
Query: 166 EELIDRVEETGI-DAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
+ ++ ++G+ +A+E+N SCP+ G +G D ++E++ I +PV+ K
Sbjct: 112 ITISKKLSDSGLLNALEINVSCPN---VAAGGMHLGTDPVVVEKLTSEIKKVVNIPVYIK 168
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN+T+I E A+ A R G++G+S INT++ +GID+KT + G+ GG+S A+
Sbjct: 169 LTPNVTNIVEIAQAAERGGADGLSMINTLLG-LGIDIKTHKAT-LGNGF---GGWSGSAI 223
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
P+A+ V + + +K + G+GG+ET D EF+L GA+ V V T G
Sbjct: 224 KPVAVRMVAQVHQAVK-------LPIIGMGGIETAADIVEFMLAGASAVAVGTAHFKDGL 276
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ L +L+ + I + G
Sbjct: 277 A-IPHLVADLETLLNELKVDDINELIG 302
>gi|407463026|ref|YP_006774343.1| dihydroorotate dehydrogenase family protein [Candidatus
Nitrosopumilus koreensis AR1]
gi|407046648|gb|AFS81401.1| dihydroorotate dehydrogenase family protein [Candidatus
Nitrosopumilus koreensis AR1]
Length = 354
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 31/329 (9%)
Query: 43 AEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTP 102
EPDL+ ++ +Q+ P ++ SG G + V R + G GAVV K++S + + P
Sbjct: 52 VEPDLTTSIGPIQLNKPVMLASGILGISLDVFNRLYRSGAGAVVTKSLSTEPWEGYP-NP 110
Query: 103 RYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNK 162
++ G GW N +S+ E K + K + L+ SI E++
Sbjct: 111 TIFSVKGG----------GWINAVGLSNPGAENFAKMIEPNKDVPIIVSLVGSIPEDF-- 158
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
E++I + E + A E+N SCPH K+G VG D L++++ + VPV
Sbjct: 159 ---EKMIQQFENCKVAAYELNLSCPH---VAKVGLEVGDDPELVKKIVSTVKNSTNVPVI 212
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
AK+ T A+ SG + ++AINT+ + M ID++T RP + GG S
Sbjct: 213 AKVGLGTTHYLNTVGTAIESGIDAITAINTVRA-MAIDVETQRPILS----NKFGGLSGT 267
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
+ PIAL V I+ + D + G GG+ T DA EF L GA+ +Q+ + + +
Sbjct: 268 PIKPIALRCVYEIS-------SKYDIPIIGCGGISTWEDAVEFFLAGASAIQLGSAIGDN 320
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ + + +M+ N+S I++ G
Sbjct: 321 WIDVFDEINTGILQYMEKKNYSKIKEMVG 349
>gi|300361819|ref|ZP_07057996.1| dihydroorotate oxidase [Lactobacillus gasseri JV-V03]
gi|300354438|gb|EFJ70309.1| dihydroorotate oxidase [Lactobacillus gasseri JV-V03]
Length = 307
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 161/320 (50%), Gaps = 32/320 (10%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGA 111
GL + NP + SG G + FD GA+V KT + A N P+ A L G
Sbjct: 10 GLDLKNPVMPASGTFGFGDVPAAKKFDLNDLGAMVIKTTT-PHATTGNPQPQIAVLDTGV 68
Query: 112 NGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIMEEYNKAAWEELID 170
S +G N ++ ++K+ L+ YP ++AS+ E ++A + E+
Sbjct: 69 LNS-----VGLTN------PGVDAVIKDKLAPLRQSYPALPIMASVGGE-DEAGYVEVAQ 116
Query: 171 RVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNI 229
++ ++G ++A+E+N SCP+ + G + G ++E + I A VP++ K+TPN+
Sbjct: 117 KLSDSGLVNALEINVSCPN---VNQGGMSFGVHPDVVESLTKKIKAVTNVPIYVKLTPNV 173
Query: 230 TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL 289
TDI + A+ A + G++G+S INT++ M ID+KT +P V G++ GG S +AV P+AL
Sbjct: 174 TDIIQIAKAAEKGGADGLSLINTLLG-MDIDIKTRKP---VLGHNV-GGLSGEAVKPVAL 228
Query: 290 GKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKR 349
+M+ + G+GG+ + D +F+L GAN V V T K
Sbjct: 229 -------RMVHQVRQSTSLPIIGMGGISSAQDVIKFMLAGANAVAVGTAHFKDSIA-SKH 280
Query: 350 LCEELKDFMKMHNFSSIEDF 369
+ +EL + ++ +I D
Sbjct: 281 IADELPNELEKLGIENINDL 300
>gi|224543225|ref|ZP_03683764.1| hypothetical protein CATMIT_02425 [Catenibacterium mitsuokai DSM
15897]
gi|224523858|gb|EEF92963.1| dihydroorotate oxidase, catalytic subunit [Catenibacterium
mitsuokai DSM 15897]
Length = 306
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 165/338 (48%), Gaps = 42/338 (12%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+LS+ + GL M NP + SG G Y K G++ K +L+ PRY
Sbjct: 3 NLSVKLPGLDMKNPVIPASGTFGFGYEFTKFYDINVLGSMSLKGTTLE--------PRYG 54
Query: 106 ----RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILI---ASIME 158
R+ G +G IG +N + D ++T E +L+ +Y K + S ++
Sbjct: 55 NPLPRIAEGPSGLLNA--IGLQNPGV--DEVIKT---ELVKLREVYSGKAIANIGGSCID 107
Query: 159 EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
+Y + A + +E I A+E+N SCP+ G A+G D + EV + A T
Sbjct: 108 DYVQTAAK----LTKEDCIGALELNISCPN---VHAGGMAIGTDPAMAAEVTRAVKAVIT 160
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
P++ K++PN+TDI A+ +G++G+S INT++ M D+++ +P + GG
Sbjct: 161 KPLYVKLSPNVTDIVAIAKAVEEAGADGISMINTLVG-MRFDIRSGKPIIA----NKTGG 215
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
YS A+ P+AL V +++ + + + G+GG+ TG DA E ++ GA+ VQV
Sbjct: 216 YSGPAIFPVALRMVYQVSQAV-------NIPVIGMGGISTGRDAIEMMIAGASAVQVGCA 268
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEY 376
++ Y R+ +E+ D + +I D G S +Y
Sbjct: 269 NLVDPYA-CPRIIQEMNDELDAMGIENITDIIGKSHQY 305
>gi|303231602|ref|ZP_07318326.1| dihydroorotate dehydrogenase 1B [Veillonella atypica
ACS-049-V-Sch6]
gi|429760285|ref|ZP_19292766.1| dihydroorotate dehydrogenase 1B [Veillonella atypica KON]
gi|302513719|gb|EFL55737.1| dihydroorotate dehydrogenase 1B [Veillonella atypica
ACS-049-V-Sch6]
gi|429177786|gb|EKY19091.1| dihydroorotate dehydrogenase 1B [Veillonella atypica KON]
Length = 316
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 167/344 (48%), Gaps = 47/344 (13%)
Query: 38 SDSASAEPDLSITVNGLQMPNPFV-----IGSGPPGTNYTVMKRAFDEGWGAVVAKTVSL 92
+++ + P L+I G++M NP + G+GP Y + GA+ K ++
Sbjct: 7 NNTVTPNPKLAIDYCGIKMKNPIIAASGTFGNGPEYAGYLDLSNEV----GAISVKGLT- 61
Query: 93 DAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKIL 152
+ N PR A +G IG EN ++ + +L E K+ D L
Sbjct: 62 PKGRHGNPGPRIAETPSGVL-----NCIGLENPG--AEHFVTDILPELKKY-----DVPL 109
Query: 153 IASI----MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEE 208
+A++ +EE+ AW + + + GI +EVN SCP+ E G A G D +++E+
Sbjct: 110 LANMSAGTVEEF---AW--MAETLSVDGIAGLEVNVSCPNVECE---GMAFGVDPKVVEQ 161
Query: 209 VCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEP 268
V + PV K++PN+TDI E A+ G GVS INT++ M ID+ +P
Sbjct: 162 VTKAVRKVTDKPVIVKLSPNVTDIVEIAKAVEAGGGNGVSLINTLLG-MAIDIHRRKP-- 218
Query: 269 CVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILL 328
+ G + GG S AV P+AL +M+ + + G+GG+ +G DA EF++
Sbjct: 219 -LLG-NIYGGLSGPAVKPVAL-------RMVHQVYKGVTIPIIGLGGIMSGTDAIEFMMA 269
Query: 329 GANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
GA VQV T M+ + R+ E+ D+++ +N +SI D GA
Sbjct: 270 GAQAVQVGTATMVDPTA-ISRIAREMGDYVERYNLNSITDIIGA 312
>gi|303230218|ref|ZP_07316986.1| dihydroorotate dehydrogenase 1B [Veillonella atypica
ACS-134-V-Col7a]
gi|302515144|gb|EFL57118.1| dihydroorotate dehydrogenase 1B [Veillonella atypica
ACS-134-V-Col7a]
Length = 316
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 166/344 (48%), Gaps = 47/344 (13%)
Query: 38 SDSASAEPDLSITVNGLQMPNPFV-----IGSGPPGTNYTVMKRAFDEGWGAVVAKTVSL 92
+++ + P L+I G++M NP + G+GP Y + GA+ K ++
Sbjct: 7 NNTVTPNPKLAIDYCGIKMKNPIIAASGTFGNGPEYAGYLDLSNEV----GAISVKGLT- 61
Query: 93 DAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKIL 152
+ N PR A +G IG EN ++ + +L E K+ D L
Sbjct: 62 PKGRHGNPGPRIAETPSGVL-----NCIGLENPG--AEHFVTDILPELKKY-----DVPL 109
Query: 153 IASI----MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEE 208
+A++ +EE+ AW + + + GI +EVN SCP+ E G A G D +++E+
Sbjct: 110 LANMSAGTVEEF---AW--MAETLSVDGIAGLEVNVSCPNVECE---GMAFGVDPKVVEQ 161
Query: 209 VCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEP 268
V + PV K++PN+TDI E A+ G GVS INT++ M ID+ R +P
Sbjct: 162 VTKAVRKVTDKPVIVKLSPNVTDIVEIAKAVEAGGGNGVSLINTLLG-MAIDIH--RRKP 218
Query: 269 CVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILL 328
+ GG S AV P+AL +M+ + + G+GG+ +G DA EF++
Sbjct: 219 LLGNIY--GGLSGPAVKPVAL-------RMVHQVYKGITIPIIGLGGIMSGTDAIEFMMA 269
Query: 329 GANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
GA VQV T M+ + R+ E+ D+++ +N +SI D GA
Sbjct: 270 GAQAVQVGTATMVDPTA-ISRIAREMGDYVERYNLNSITDIIGA 312
>gi|312135188|ref|YP_004002526.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor
owensensis OL]
gi|311775239|gb|ADQ04726.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor
owensensis OL]
Length = 300
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 163/330 (49%), Gaps = 39/330 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+L + + G+++ NP + SG G K +GA+ K ++L ++ N PR
Sbjct: 2 NLEVEIAGVRLKNPVIAASGTFGFGREYSKLIDISEFGAICTKGITLKK-RIGNPQPRLC 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ AG S +G EN +E + L LK F D +IA+I N
Sbjct: 61 EVYAGIINS-----VGLENPGVEAFVNDEL-PFLKSF--------DTKIIANI----NGF 102
Query: 164 AWEELID--RVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
A EE ++ ++ + +D IEVN SCP+ ++ G G+D + E+ + A+ P+
Sbjct: 103 AKEEFVELTKILTSLVDMIEVNLSCPN---VKEGGMVFGKDPEKVYEITNSVKNVASCPI 159
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
K+TPN+TDIT+ A A ++G++ +S INTI S M ID++T + P ++ + GG S
Sbjct: 160 IVKLTPNVTDITQLAVAAEKAGADAISLINTI-SAMAIDIETRK--PLIQMVT--GGLSG 214
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
A+ PIA+ +M+ F + G+GG+ DA EF + GA +Q+ T V
Sbjct: 215 PAIKPIAV-------RMVYECFKKVRIPIIGMGGIMNYKDAIEFFIAGATAIQIGT-VNF 266
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
V + E ++D++ F+SI + G
Sbjct: 267 INPKAVYEIKEGIEDYLDRKGFNSIRELVG 296
>gi|187251139|ref|YP_001875621.1| dihydroorotate dehydrogenase [Elusimicrobium minutum Pei191]
gi|186971299|gb|ACC98284.1| Dihydroorotate dehydrogenase [Elusimicrobium minutum Pei191]
Length = 303
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 158/332 (47%), Gaps = 41/332 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
+ I + GL+ NP + SG + + GAVV KTV+L+ + N PR A
Sbjct: 2 VKINIGGLEFKNPVMTASGTFASGKEYSEFVDLNKLGAVVCKTVTLNQ-RDGNKPPRIAD 60
Query: 107 LRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ SA IG EN +E + L LK F D +ASI N
Sbjct: 61 MP-----SAMLNSIGLENKGLEYFIENTLP-FLKNF--------DTRTVASIAGN-NVED 105
Query: 165 WEELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ L R+ E + AIEVN SCP+ + + G QD + E+ + P++
Sbjct: 106 YTTLAKRLNECKEVHAIEVNMSCPNVVHGQNKGL-FSQDEKTTFEIMSAVRKNTNKPIFG 164
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++P + DIT A+ R+G + V+ INTI MG+DLKT RP + G T GG S A
Sbjct: 165 KISPMVADITVIAKAIERAGGDAVALINTI-PAMGVDLKTRRP---LLGNIT-GGLSGPA 219
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
V P+AL V + K +K + G+GG+ DA EFIL GA VQV TG ++
Sbjct: 220 VKPVALKLVWDVYKAVK-------IPVIGMGGIMCAQDALEFILCGATAVQVGTGNFVN- 271
Query: 344 YGLVKRLCEE----LKDFMKMHNFSSIEDFRG 371
+L EE ++ + K +N S ++D +G
Sbjct: 272 ----PKLTEETALGIEKYFKENNLSGVDDLKG 299
>gi|325911919|ref|ZP_08174322.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners UPII 143-D]
gi|325476221|gb|EGC79384.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners UPII 143-D]
Length = 306
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 165/327 (50%), Gaps = 30/327 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYA 105
L++ + GL + NP + SG G + +D GA+V KT +L A ++ N P+ A
Sbjct: 4 LNVKLPGLNLKNPIMPASGTFGFGDVPQAKKYDLNEMGAMVFKTTTLHA-RIGNPQPQIA 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ G S +G N + D+ + + FK+ YP LIAS+ + +
Sbjct: 63 VMKNGVLNS-----VGLTNPGV--DKVISDKIAPFKEQ---YPQLPLIASVGGS-QISDY 111
Query: 166 EELIDRVEETGI-DAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
+ ++ ++G+ +A+E+N SCP+ G +G D ++E++ I +P++ K
Sbjct: 112 ITISKKLSDSGLLNALEINVSCPN---VAAGGMHLGTDPVVVEKLTSEIKKVVNIPIYIK 168
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN+T+I E A+ A R G++G+S INT++ +GID+KT + G+ GG+S A+
Sbjct: 169 LTPNVTNIVEIAQAAERGGADGLSMINTLLG-LGIDIKTHKAT-LGNGF---GGWSGSAI 223
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
P+A+ V + + +K + G+GG+ET D EF+L GA+ V V T G
Sbjct: 224 KPVAVRMVAQVHQAVK-------LPIIGMGGIETAADIVEFMLAGASAVAVGTAHFKDGL 276
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ L +L+ + I + G
Sbjct: 277 A-IPHLVADLETLLNELKVDDINELIG 302
>gi|258404157|ref|YP_003196899.1| dihydroorotate dehydrogenase family protein [Desulfohalobium
retbaense DSM 5692]
gi|257796384|gb|ACV67321.1| dihydroorotate dehydrogenase family protein [Desulfohalobium
retbaense DSM 5692]
Length = 304
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 154/328 (46%), Gaps = 32/328 (9%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+ + GL + NP + SG G M E GA+V K +SL A + N PR
Sbjct: 2 DMQVAFAGLDLKNPIMTASGTFGYGTEFMPYGKLEELGAIVVKGISL-APRKGNPQPRIT 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
G + Q IG E + D+ + + + LY A +EE+
Sbjct: 61 ETACGMLNAIGLQNIGVE--AFLRDKLPQLPWRTTPVIVNLY------AQAVEEF----- 107
Query: 166 EELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWA 223
EL DR+ G+ +EVN SCP+ R+ G GQD L V + +A +PV
Sbjct: 108 AELTDRLATAKGVAGLEVNISCPN---VREGGVQFGQDPVLAARVTEAVKKRAGALPVMV 164
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+TD+T AR G++ +S INT+ M +D+ + R PC+ + GG S A
Sbjct: 165 KLSPNVTDVTVMARAVADGGADCISCINTLTG-MAVDIHSRR--PCLA--NVVGGLSGPA 219
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ P+AL +M+ D + G+GG+ + D EF+L+GA+ VQ+ T +
Sbjct: 220 IKPVAL-------RMVHQVVRAVDVPVVGLGGISSAEDVLEFLLVGAHAVQLGTANFVRP 272
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
K L +E++ + S+ EDFRG
Sbjct: 273 DTAFK-LVDEVRRLAEEMGISAWEDFRG 299
>gi|294793332|ref|ZP_06758477.1| dihydroorotate oxidase [Veillonella sp. 6_1_27]
gi|417000949|ref|ZP_11940943.1| dihydroorotate dehydrogenase 1B [Veillonella parvula
ACS-068-V-Sch12]
gi|294455763|gb|EFG24128.1| dihydroorotate oxidase [Veillonella sp. 6_1_27]
gi|333975823|gb|EGL76700.1| dihydroorotate dehydrogenase 1B [Veillonella parvula
ACS-068-V-Sch12]
Length = 316
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 162/342 (47%), Gaps = 43/342 (12%)
Query: 38 SDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEG--WGAVVAKTVSLDAA 95
+++ + P L+I G++M NP + SG F G + + + + A
Sbjct: 7 NNTVTPNPKLAIDYCGIKMKNPIIAASG-----------TFGNGPEYAGYLDLSNEIGAI 55
Query: 96 KVINVTPRYAR----LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKI 151
V +TP+ R S IG EN ++ + +L E K+ D
Sbjct: 56 SVKGLTPKGRHGNPGTRIAETPSGVLNCIGLENPG--AEHFVREILPELKKY-----DVP 108
Query: 152 LIASIME-EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVC 210
L+A++ ++ AW + + + GI +EVN SCP+ E G A G D +++E V
Sbjct: 109 LLANMSAGTIDEFAW--MAETLSVDGIAGLEVNVSCPNVECE---GMAFGVDPKVVESVT 163
Query: 211 GWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV 270
+ PV K++PN+TDI E A+ G GVS INT++ M ID+ +P V
Sbjct: 164 KAVRKVTDKPVIVKLSPNVTDIVEIAKAVEAGGGNGVSLINTLLG-MAIDIHRRKP---V 219
Query: 271 EGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGA 330
G +T GG S AV P+AL +M+ + + G+GG+ TG DA EF++ GA
Sbjct: 220 LG-NTYGGLSGPAVKPVAL-------RMVHQVYKGVTIPIIGLGGIMTGTDAIEFMMAGA 271
Query: 331 NTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
VQV T M+ + R+ E+ ++++ +N +SI D GA
Sbjct: 272 QAVQVGTATMVDPTA-ISRIAREMSEYVEQYNLNSITDIVGA 312
>gi|217076475|ref|YP_002334191.1| dihydroorotate dehydrogenase [Thermosipho africanus TCF52B]
gi|217036328|gb|ACJ74850.1| dihydroorotate dehydrogenase family protein [Thermosipho africanus
TCF52B]
Length = 360
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 163/330 (49%), Gaps = 36/330 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS ++G+++ NP + SGP +Y + G GA+V KT+S AA+V PR
Sbjct: 2 DLSTNISGIKIDNPVMPASGPLVGDYEKIMFIDSMGVGAIVTKTISTKAAQV----PRPC 57
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
G N A N EL S+ P E + E K LI S Y+K
Sbjct: 58 IY--GENNFAM-------NAELWSELPPEKWIDEILPKLKKNLKKPLIVS--AGYSKEDM 106
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+LI +++ DA E++ VG+D + E+ I P++ K+
Sbjct: 107 EKLIPQLDPFA-DAFEISTH------------YVGKDYNTIAEIVKTIRKNTKKPIFMKI 153
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
+P+I D E +VA+ +G+ G+ AIN++ M ID+K + + S A+
Sbjct: 154 SPHIPDPVEFTKVAIGNGANGIVAINSLGPTMKIDIKNRKV--LIGNEKGQVWLSGPAIK 211
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
P+AL +I KM++ F D ++ G+GG+++ D EF+L GA+ VQ+ + +++G
Sbjct: 212 PLAL----AIVKMLRDAF--PDITIIGVGGIKSADDVIEFLLAGADAVQLLSSALIYGKD 265
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
+ +R+ ++L ++ + F+S+E+ R ++
Sbjct: 266 IYERIIKDLPRKLEKYGFNSVEEIRKTKLD 295
>gi|259501327|ref|ZP_05744229.1| dihydroorotate oxidase [Lactobacillus iners DSM 13335]
gi|302190949|ref|ZP_07267203.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners AB-1]
gi|309806011|ref|ZP_07700037.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners
LactinV 03V1-b]
gi|312873761|ref|ZP_07733806.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF
2052A-d]
gi|259167297|gb|EEW51792.1| dihydroorotate oxidase [Lactobacillus iners DSM 13335]
gi|308167614|gb|EFO69767.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners
LactinV 03V1-b]
gi|311090759|gb|EFQ49158.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF
2052A-d]
Length = 306
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 165/327 (50%), Gaps = 30/327 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYA 105
L++ + GL + NP + SG G + +D GA+V KT +L A ++ N P+ A
Sbjct: 4 LNVKLPGLNLKNPIMPASGTFGFGDVPQAKKYDLNEMGAMVFKTTTLHA-RIGNPQPQIA 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ G S +G N + D+ + + FK+ YP LIAS+ + +
Sbjct: 63 VMKNGVLNS-----VGLTNPGV--DKVISDKIAPFKEQ---YPQLPLIASVGGS-QISDY 111
Query: 166 EELIDRVEETGI-DAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
+ ++ ++G+ +A+E+N SCP+ G +G D ++E++ I +PV+ K
Sbjct: 112 ITIAKKLSDSGLLNALEINVSCPN---VAAGGMHLGTDPVVVEKLTSEIKKVVNIPVYIK 168
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN+T+I E A+ A R G++G+S INT++ +GID+KT + G+ GG+S A+
Sbjct: 169 LTPNVTNIVEIAQAAERGGADGLSMINTLLG-LGIDIKTHKAT-LGNGF---GGWSGSAI 223
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
P+A+ V + + +K + G+GG+ET D EF+L GA+ V V T G
Sbjct: 224 KPVAVRMVAQVHQAVK-------LPIIGMGGIETAEDIVEFMLAGASAVAVGTAHFKDGL 276
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ L +L+ + I + G
Sbjct: 277 A-IPHLVADLETLLNELKVDDINELIG 302
>gi|347525396|ref|YP_004832144.1| dihydroorotate dehydrogenase 1B [Lactobacillus ruminis ATCC 27782]
gi|345284355|gb|AEN78208.1| dihydroorotate dehydrogenase 1B [Lactobacillus ruminis ATCC 27782]
Length = 311
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 164/332 (49%), Gaps = 31/332 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L++ + GL + NP + SG G K +E GA+V KT +++A + N P+ A
Sbjct: 6 LAVKLPGLDLKNPVMPASGTFGFGEN-PKYDLNE-LGAIVVKTTTVEA-RTGNPNPKIAL 62
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
+ G + Q G E + + ++ LK YP ++ S+ ++ +
Sbjct: 63 MDNGVLNAVGLQNPGLEAV----------IAEKLPSLKQSYPSLPIVGSVGGS-SEEDYV 111
Query: 167 ELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+ R+ ++G +DA+E+N SCP+ +K G A G + +++ + ++VPV+ K+
Sbjct: 112 EVASRLSQSGYVDALELNISCPN---VKKGGMAFGTVPEVAKKLTEEVKKASSVPVYVKL 168
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
+PN+TDI A+ G++G++ INT++ M IDLKT + V G T GG+S V
Sbjct: 169 SPNVTDICAIAKAVEEGGADGLTMINTLLG-MHIDLKTRK---SVLGNLT-GGFSGHGVL 223
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
P+A+ + +A + D + G+GG+E D E L GA+ VQV +
Sbjct: 224 PVAIRMIYQVAHVC-------DLPIIGVGGIERPEDIIEMFLAGASAVQVGSAHFDDPL- 275
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYF 377
+ L E+L D M SS+E+ R E F
Sbjct: 276 ICPHLIEKLPDLMDELQISSLEELRKEVKEAF 307
>gi|313894665|ref|ZP_07828228.1| dihydroorotate oxidase, catalytic subunit [Veillonella sp. oral
taxon 158 str. F0412]
gi|313440855|gb|EFR59284.1| dihydroorotate oxidase, catalytic subunit [Veillonella sp. oral
taxon 158 str. F0412]
Length = 316
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 165/345 (47%), Gaps = 49/345 (14%)
Query: 38 SDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEG--WGAVVAKTVSLDAA 95
+++ + P L+I G++M NP + SG F G + V + + A
Sbjct: 7 NNTVTPNPKLAIDYCGIKMKNPIIAASG-----------TFGNGPEYAGYVDLSNEVGAI 55
Query: 96 KVINVTPRYAR----LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKI 151
V +TP+ R S IG EN ++ + +L + K+ D
Sbjct: 56 SVKGLTPKGRHGNRGTRIAETPSGVLNCIGLENPG--AEYFVTDILPDLKKY-----DVP 108
Query: 152 LIASI----MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLE 207
L+A++ +EE+ AW + + + GI +EVN SCP+ E G A G D +++E
Sbjct: 109 LLANMSAGTIEEF---AW--MAETLSVDGIAGLEVNVSCPNVECE---GMAFGVDPKVVE 160
Query: 208 EVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPE 267
+V + PV K++PN+TDI E A+ G +GVS INTI+ M ID+ +P
Sbjct: 161 QVTKAVRKVTDKPVIVKLSPNVTDIVEIAKAVEAGGGDGVSLINTILG-MAIDIHRRQP- 218
Query: 268 PCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFIL 327
V G + GG S AV P+AL +M+ + + + G+GG+ TG DA EF++
Sbjct: 219 --VLG-NIYGGLSGPAVKPVAL-------RMVHQVYKGVNIPIMGLGGIMTGTDAIEFMM 268
Query: 328 LGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
GA VQV M+ + R+ E+ ++++ +N +SI D GA
Sbjct: 269 AGAQAVQVGVATMVDPTA-ISRIAREMSEYVEQYNLNSISDIVGA 312
>gi|147678141|ref|YP_001212356.1| dihydroorotate dehydrogenase 1B [Pelotomaculum thermopropionicum
SI]
gi|146274238|dbj|BAF59987.1| dihydroorotate dehydrogenase [Pelotomaculum thermopropionicum SI]
Length = 307
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 156/331 (47%), Gaps = 35/331 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+L++ V G+QM NP SG G GAVV K V+L A + N PR A
Sbjct: 6 NLTVNVGGIQMKNPVTTASGTFGCGLEYAPFVDLNRLGAVVVKGVTL-APRAGNPVPRLA 64
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILI---ASIMEEYNK 162
AG S IG +N +E ++E A Y +++ +EEY
Sbjct: 65 ETPAGVLNS-----IGLQN------PGVEKFIEEVLPGLAGYDLPVIVNIAGETVEEYAL 113
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
A +DRV+ + IEVN SCP+ +K G G D + EV + A PV
Sbjct: 114 LAGR--LDRVQ--AVAGIEVNISCPN---VKKGGMQFGSDPAMAAEVTRAVRASTGKPVI 166
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
K++PN+T I AR +G++ +S INT++ M +D++ RP + G T GG S
Sbjct: 167 VKLSPNVTSIVAVARKVAEAGADALSMINTLLG-MAVDIRKRRP---LLGNVT-GGLSGP 221
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
AV P+A+ V + + + D + G+GG+ GDA EFIL GA V V T ++
Sbjct: 222 AVRPVAVRAVWEV-------YREVDLPIIGMGGITCAGDAIEFILAGATAVAVGTANFVN 274
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V+ + E ++ +++ + I + GA+
Sbjct: 275 PRATVE-IAEGIERYLEENGIRDINELVGAA 304
>gi|220905462|ref|YP_002480774.1| dihydroorotate dehydrogenase family protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219869761|gb|ACL50096.1| dihydroorotate dehydrogenase family protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 308
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 168/341 (49%), Gaps = 52/341 (15%)
Query: 46 DLSITVNG----LQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT 101
DLS+T+NG L + NP + SG G G G +V K +SL+ + N T
Sbjct: 2 DLSVTLNGQTHDLPLKNPILTASGTFGYGVEFASYGDLAGLGGMVVKGLSLEPREG-NPT 60
Query: 102 PRYARLRAGANGSAKGQIIGWEN--IELISDRPLETM-LKEFKQLKALYPDKILIASIME 158
PR +G + +G +N +++ + L + +E + +Y AS E
Sbjct: 61 PRIVETVSGMLNA-----VGLQNDGVDVFCTQKLPLLPWQETAVIANIY------ASSAE 109
Query: 159 EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWI-NAKA 217
E+ + A L D E G+ A+EVN SCP+ R+ G A GQD ++ +V + +A
Sbjct: 110 EFGRLA-ARLND---EEGVAALEVNVSCPN---VREGGVAFGQDPGMIAQVTSIVRHAAP 162
Query: 218 TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277
+ K++PN+TDIT AR A +G++ +S INT++ M +DL+T RP + G
Sbjct: 163 GKHIMVKLSPNVTDITVMARAAEDAGADSISCINTLLG-MAVDLQTRRPSLA----NVVG 217
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
G S A+ P+AL V +A+ +K + G+GG+ D EFIL GA+ VQ+ T
Sbjct: 218 GLSGPAIKPVALRCVWQVARAVK-------IPVIGVGGISCVEDVLEFILAGAHAVQIGT 270
Query: 338 GVMMH---GYGLVKRL---CEELKDFMKMHNFSSIEDFRGA 372
M + LV++L CE L +S+++ RG+
Sbjct: 271 ASFMRPDCAFDLVQQLPEACERL-------GITSLQELRGS 304
>gi|390961524|ref|YP_006425358.1| putative dihydroorotate dehydrogenase [Thermococcus sp. CL1]
gi|390519832|gb|AFL95564.1| putative dihydroorotate dehydrogenase [Thermococcus sp. CL1]
Length = 301
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 162/335 (48%), Gaps = 44/335 (13%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + + G++ NP ++ SG RA +EG G VV K++ ++ K + P
Sbjct: 4 LEVELFGIKFENPLILASGINDKVPEQWIRAHEEGAGGVVTKSIGIEPRKGYD-NPTIVE 62
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYP-DKILIASIM----EEYN 161
L G + GW +EF ++ Y D LI SI EE+
Sbjct: 63 LPCGLINAMGLPNPGW---------------REFLEMVEGYTFDFPLIVSIFGGTPEEFA 107
Query: 162 KAAWEELIDRVEETGI-DAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
A E+L +G+ D E+N SCPH + G +GQ + EV + P
Sbjct: 108 FLA-EKL------SGVADVFELNLSCPHA---KGYGMEIGQKPENVYEVVRAVKDATDRP 157
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
V AK+TPNI DIT+ A R+G++ VSAINT+ ++ ID+ RP + GGYS
Sbjct: 158 VIAKLTPNIDDITKLGLAAERAGADAVSAINTLKAI-AIDIYAKRPILS----NRVGGYS 212
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
+ P+AL V +A+ + D + GIGG+ T DA EF+L GA+ +Q+ T V
Sbjct: 213 GPGIKPVALRAVYDLARTL-------DIPIIGIGGITTWQDAVEFLLAGASALQIGTAVS 265
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
+ G+ + + + E + +++ FSS+E+ G ++E
Sbjct: 266 LRGWKVFREINEGIVRYLEEEGFSSVEEIVGLALE 300
>gi|222055868|ref|YP_002538230.1| dihydroorotate dehydrogenase 1B [Geobacter daltonii FRC-32]
gi|254788889|sp|B9M211.1|PYRDB_GEOSF RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|221565157|gb|ACM21129.1| dihydroorotate dehydrogenase family protein [Geobacter daltonii
FRC-32]
Length = 305
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 160/331 (48%), Gaps = 31/331 (9%)
Query: 43 AEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTP 102
A+PDLS+ ++G+++ NP + SG G E GA++ K +SL K N TP
Sbjct: 2 AKPDLSVEISGIKLRNPVMTASGTFGYGKEFSDYLDLEKIGAIITKGLSLRP-KAGNPTP 60
Query: 103 RYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKI-LIASIMEEYN 161
R G + IG +N+ + D + L + + P + L + +EEY
Sbjct: 61 RIVETPGGMLNA-----IGLQNVGI--DAFIGEKLPFLRTVDT--PVIVNLYGNTLEEYG 111
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
+ A E +DR+ E + +EVN SCP+ ++ G G D EV G + + P+
Sbjct: 112 ELA--EKLDRLPE--VAGLEVNISCPN---VKQGGIVFGTDPNAAAEVVGLVRRSTSKPL 164
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
K++PN+TD+ A + +G++ +S INT+ M IDL+ RP + GG S
Sbjct: 165 IIKLSPNVTDVVRMADACVNAGADALSLINTLTG-MAIDLQKRRPILA----NITGGLSG 219
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
A+ P+AL V +++ M + GIGG+ + DA EF+L GA VQV T +
Sbjct: 220 PAIKPVALRMVWQVSQAMA-------VPIIGIGGIMSATDALEFMLAGATAVQVGTANFL 272
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
+ + ++D++ + S +++ GA
Sbjct: 273 DPSA-AQTIAAGIEDYLAKNGISDVKELIGA 302
>gi|302872484|ref|YP_003841120.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575343|gb|ADL43134.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor
obsidiansis OB47]
Length = 381
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 159/335 (47%), Gaps = 41/335 (12%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
P+LS T L + P ++ S ++R + G GAVV K++ I TPR+
Sbjct: 2 PNLSTTYAKLTLRTPVIVASAGITGTVERLQRCEENGAGAVVTKSLFQKEVCRIAPTPRF 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
++ + + +E ++ + + + KQ K P +IASI Y A
Sbjct: 62 KIVKHENTFT----LYSYEQASELNPQEYAEFIFKAKQ-KLSIP---VIASI-NCYTDDA 112
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG---WINAKATVPV 221
W E +E+ G DAIE+N SCPHG+ G D ++EE+ + + +PV
Sbjct: 113 WLEYSKLMEQAGADAIELNLSCPHGV-----HIMSGMD--VIEEMVHTTKLVKSNVKIPV 165
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG-YSTPGGYS 280
KMTP T+ P ALR G + G+D+ + P + G Y+ GG
Sbjct: 166 IPKMTPQSTN---PGSDALRLDQAGADGLVMFNRFTGLDIDIEKEAPILHGGYAGHGG-- 220
Query: 281 CKAVHPIA----LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336
P A L + ++A +K S+S GG G D ++IL GA+ VQVC
Sbjct: 221 -----PWAIMYGLRWISAVAPKVKC-------SISASGGAMNGEDVVKYILAGASAVQVC 268
Query: 337 TGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
T V+++GYG++ ++ + L+++M+ +++I+DF+G
Sbjct: 269 TTVILNGYGVINKINKYLEEYMERKGYNTIDDFKG 303
>gi|297617027|ref|YP_003702186.1| dihydroorotate dehydrogenase [Syntrophothermus lipocalidus DSM
12680]
gi|297144864|gb|ADI01621.1| dihydroorotate dehydrogenase family protein [Syntrophothermus
lipocalidus DSM 12680]
Length = 312
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 165/331 (49%), Gaps = 33/331 (9%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+LS+ + G+ + NP + SG G + GAV+ K +L+ + N PR
Sbjct: 11 NLSVDLGGITLKNPVTVASGTFGYGAEYEEFIDLSELGAVIVKGTTLEP-RDGNPPPRIV 69
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
AG + IG EN +E++ + L ++ KA I + +E+Y +
Sbjct: 70 ETPAGMLNA-----IGLENPGVEVL----INVHLPHLREKKATVIVNIA-GNQVEDYARL 119
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
A ++DR + GI +EVN SCP+ ++ G G D +++EV + +P+
Sbjct: 120 AA--ILDR--QPGIAGLEVNISCPN---VKQGGLQFGTDPIMIDEVVRAVRESTRLPLIV 172
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+TDI A+ A+ +G+ +S INT++ M ID++ RP + GG S A
Sbjct: 173 KLSPNVTDIVAMAKAAVNAGANAISLINTLLG-MAIDVEKRRPALG----NIFGGLSGPA 227
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ PIA+ V +AK + D + G+GG+ DA EFIL GA V + TG +
Sbjct: 228 IKPIAVRMVYQVAK-------EVDVPILGMGGIMNYSDALEFILAGATAVSIGTGNFVD- 279
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASI 374
G+ +R+ +L+ +++ + I++ GA+I
Sbjct: 280 PGISRRIIGDLEQYLEKNGIYDIQELIGAAI 310
>gi|309803608|ref|ZP_07697700.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners
LactinV 11V1-d]
gi|309805602|ref|ZP_07699645.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners
LactinV 09V1-c]
gi|312870729|ref|ZP_07730836.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF
3008A-a]
gi|312872879|ref|ZP_07732941.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF
2062A-h1]
gi|312875152|ref|ZP_07735165.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF
2053A-b]
gi|315653078|ref|ZP_07906006.1| dihydroorotate oxidase [Lactobacillus iners ATCC 55195]
gi|329919621|ref|ZP_08276610.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners SPIN 1401G]
gi|349612141|ref|ZP_08891368.1| dihydroorotate dehydrogenase [Lactobacillus sp. 7_1_47FAA]
gi|308164356|gb|EFO66611.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners
LactinV 11V1-d]
gi|308165103|gb|EFO67343.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners
LactinV 09V1-c]
gi|311089259|gb|EFQ47690.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF
2053A-b]
gi|311091613|gb|EFQ49995.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF
2062A-h1]
gi|311093741|gb|EFQ52078.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus iners LEAF
3008A-a]
gi|315489613|gb|EFU79247.1| dihydroorotate oxidase [Lactobacillus iners ATCC 55195]
gi|328937426|gb|EGG33848.1| dihydroorotate dehydrogenase 1B [Lactobacillus iners SPIN 1401G]
gi|348609157|gb|EGY59118.1| dihydroorotate dehydrogenase [Lactobacillus sp. 7_1_47FAA]
Length = 306
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 165/327 (50%), Gaps = 30/327 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYA 105
L++ + GL + NP + SG G + +D GA+V KT +L A ++ N P+ A
Sbjct: 4 LNVKLPGLNLKNPIMPASGTFGFGDVPQAKKYDLNEMGAMVFKTTTLHA-RIGNPQPQIA 62
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
++ G S +G N + D+ + + FK+ YP LIAS+ + +
Sbjct: 63 VMKNGVLNS-----VGLTNPGV--DKVISDKIAPFKEQ---YPQLPLIASVGGS-QISDY 111
Query: 166 EELIDRVEETGI-DAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
+ ++ ++G+ +A+E+N SCP+ G +G D ++E++ I +PV+ K
Sbjct: 112 ITISKKLSDSGLLNALEINVSCPN---VAAGGMHLGTDPVVVEKLTSEIKKVVNIPVYIK 168
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN+T+I E A+ A R G++G+S INT++ +GID+KT + G+ GG+S A+
Sbjct: 169 LTPNVTNIVEIAQAAERGGADGLSMINTLLG-LGIDIKTHKAT-LGNGF---GGWSGSAI 223
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
P+A+ V + + +K + G+GG+ET D EF+L GA+ V V T G
Sbjct: 224 KPVAVRMVAQVHQAVK-------LPIIGMGGIETAEDIVEFMLAGASAVAVGTAHFKDGL 276
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ L +L+ + I + G
Sbjct: 277 A-IPHLVADLETLLNELKVDDINELIG 302
>gi|158321215|ref|YP_001513722.1| dihydroorotate dehydrogenase 1B [Alkaliphilus oremlandii OhILAs]
gi|189038414|sp|A8MIU4.1|PYRDB_ALKOO RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|158141414|gb|ABW19726.1| dihydroorotate dehydrogenase family protein [Alkaliphilus
oremlandii OhILAs]
Length = 302
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 156/326 (47%), Gaps = 30/326 (9%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
++ + + G+Q+ NP + SG G+ + GAVV K V+ + N TPR A
Sbjct: 5 NMGVHIAGIQLKNPVMTASGTFGSGREYSEFVDLNQLGAVVVKGVANEPWSG-NPTPRIA 63
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
G S +G +N +E +K+ Q Y KI++ + A +
Sbjct: 64 ETYGGMLNS-----VGLQN------PGVEAFIKDDIQFLRQYDTKIIVN--IAGRTVADY 110
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
++ +++ + ID IE+N SCP+ + G G + ++EEV + A P+ K+
Sbjct: 111 CKVTEKLGDADIDLIELNISCPN---VKAGGVNFGTNPAMVEEVTKAVKKVARQPLIVKL 167
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+TDI E A+ A+ G++ +S INT++ M ID+ +P + GG S A+
Sbjct: 168 TPNVTDIVEIAKAAVAGGADAISLINTLLG-MAIDIHGRKPILA----NVVGGLSGPAIK 222
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
P+AL V +A N + G+GG+ TG DA F+L GA V V T M+
Sbjct: 223 PVALRMVYQVA-------NAVQVPIIGMGGIATGEDAIAFMLAGATGVAVGTANFMNPRA 275
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
++ L E ++D+M +N I + G
Sbjct: 276 TMEVL-EGIEDYMDQYNIEDIHEIIG 300
>gi|420373483|ref|ZP_14873584.1| putative oxidoreductase [Shigella flexneri 1235-66]
gi|391317208|gb|EIQ74555.1| putative oxidoreductase [Shigella flexneri 1235-66]
Length = 135
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 85/139 (61%), Gaps = 5/139 (3%)
Query: 180 IEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVA 239
IE NFSCP M MG+ VGQ L+E+ C + +T+P+ AKMTPNI D+ E A A
Sbjct: 2 IECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEVALAA 60
Query: 240 LRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMM 299
R G++G++AINT+ S+ IDL P V G S+ GYS KAV PIAL + M
Sbjct: 61 KRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIAL----RFIQQM 116
Query: 300 KSEFNDKDYSLSGIGGVET 318
++ +D+ +SGIGG+ET
Sbjct: 117 RTHPELRDFPISGIGGIET 135
>gi|323339843|ref|ZP_08080112.1| dihydroorotate oxidase [Lactobacillus ruminis ATCC 25644]
gi|335996594|ref|ZP_08562511.1| dihydroorotate dehydrogenase 1B [Lactobacillus ruminis SPM0211]
gi|417974087|ref|ZP_12614911.1| dihydroorotate dehydrogenase 1B [Lactobacillus ruminis ATCC 25644]
gi|323092716|gb|EFZ35319.1| dihydroorotate oxidase [Lactobacillus ruminis ATCC 25644]
gi|335351664|gb|EGM53155.1| dihydroorotate dehydrogenase 1B [Lactobacillus ruminis SPM0211]
gi|346329542|gb|EGX97837.1| dihydroorotate dehydrogenase 1B [Lactobacillus ruminis ATCC 25644]
Length = 311
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 164/332 (49%), Gaps = 31/332 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L++ + GL + NP + SG G K +E GA+V KT +++A + N P+ A
Sbjct: 6 LAVKLPGLDLKNPVMPASGTFGFGEN-PKYDLNE-LGAIVVKTTTVEA-RTGNPNPKIAL 62
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
+ G + Q G E + + ++ LK YP +I S+ ++ +
Sbjct: 63 MDNGVLNAVGLQNPGLEAV----------IAEKLPSLKQSYPSLPIIGSVGGS-SEEDYV 111
Query: 167 ELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+ R+ ++G +DA+E+N SCP+ +K G A G + +++ + ++VPV+ K+
Sbjct: 112 EVASRLSQSGYVDALELNISCPN---VKKGGMAFGTVPEVAKKLTEEVKKASSVPVYVKL 168
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
+PN+TD+ A+ G++G++ INT++ M IDLKT + V G T GG+S V
Sbjct: 169 SPNVTDVCAIAKAVEEGGADGLTMINTLLG-MHIDLKTRK---SVLGNLT-GGFSGHGVL 223
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
P+A+ + +A + D + G+GG+E D E L GA+ VQV +
Sbjct: 224 PVAIRMIYQVAHVC-------DLPIIGVGGIERPEDIIEMYLAGASAVQVGSAHFDDPL- 275
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIEYF 377
+ L E+L D M SS+E+ R E F
Sbjct: 276 ICPHLIEKLPDLMDELQISSLEELRKEVKEAF 307
>gi|269797631|ref|YP_003311531.1| dihydroorotate dehydrogenase [Veillonella parvula DSM 2008]
gi|269094260|gb|ACZ24251.1| dihydroorotate dehydrogenase family protein [Veillonella parvula
DSM 2008]
Length = 316
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 164/345 (47%), Gaps = 49/345 (14%)
Query: 38 SDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEG--WGAVVAKTVSLDAA 95
+++ + P L+I G++M NP + SG F G + + + + A
Sbjct: 7 NNTVTPNPKLAIDYCGIKMKNPIIAASG-----------TFGNGPEYAGYLDLSNEVGAI 55
Query: 96 KVINVTPRYAR----LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKI 151
V +TP+ R S IG EN ++ + +L + ++ D
Sbjct: 56 SVKGLTPKGRHGNPGTRIAETPSGVLNCIGLENPG--AEHFVRKILPDLEKY-----DVP 108
Query: 152 LIASI----MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLE 207
L+A++ +EE+ AW + + + GI +EVN SCP+ E G A G D +++E
Sbjct: 109 LLANMSAGTVEEF---AW--MAETLSVDGIAGLEVNVSCPNVECE---GMAFGIDPKVVE 160
Query: 208 EVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPE 267
+V + PV K++PN+TDI E A+ G GVS INT++ M ID+ +P
Sbjct: 161 QVTKAVRKVTDKPVIVKLSPNVTDIVEIAKAVEAGGGNGVSLINTLLG-MAIDIHRRKP- 218
Query: 268 PCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFIL 327
V G + GG S AV P+AL +M+ + + G+GG+ TG DA EF++
Sbjct: 219 --VLG-NIYGGLSGPAVKPVAL-------RMVHQVYKGVTIPIIGLGGIMTGTDAIEFMM 268
Query: 328 LGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
GA VQV T M+ + R+ E+ ++++ HN +SI D GA
Sbjct: 269 AGAQAVQVGTATMVDPTA-ISRIAREMSEYVEQHNLNSITDIVGA 312
>gi|291531442|emb|CBK97027.1| dihydroorotate oxidase B, catalytic subunit [Eubacterium siraeum
70/3]
Length = 306
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 158/334 (47%), Gaps = 38/334 (11%)
Query: 42 SAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT 101
S +PD+S+ V G NP + SG G G + K +L+ K N+
Sbjct: 2 SFKPDISVDVCGKHFKNPVIAASGAYGFGEDYTDLYPLSALGGISCKGTTLNK-KDGNIP 60
Query: 102 PRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI----M 157
PR A +G S +G +N + D+ + L ++ D ++IA+I +
Sbjct: 61 PRIAETPSGILNS-----VGLQNPGV--DKFINYYLPRLRKQ-----DTVVIANIAGAVI 108
Query: 158 EEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA 217
++Y A ++++ T +D IE+N SCP+ ++ GA G C V +
Sbjct: 109 DDYIAVA-----EKLDATDVDMIELNISCPN---VKQGGATWGVTCEGAASVTRAVRNAT 160
Query: 218 TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277
PV K+TPN+T+ITE A+ G++ VS INT++ M ID++T RP ++ G
Sbjct: 161 KKPVIVKLTPNVTNITEIAKAVEAEGADSVSLINTLLG-MRIDIRTRRPIL----HNNVG 215
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
G S AV P+A+ V +A +K + G+GG+ T DA E ++ GA+ VQ+ T
Sbjct: 216 GLSGPAVFPVAVRMVWQVANAVK-------IPVIGMGGIATAEDAIEMMMAGASAVQMGT 268
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ Y +K +CE ++ F+ I D G
Sbjct: 269 AIFNDPYAPIK-VCEGMEKFLAEQKIEKISDIVG 301
>gi|336421981|ref|ZP_08602135.1| dihydroorotate dehydrogenase [Lachnospiraceae bacterium 5_1_57FAA]
gi|336009271|gb|EGN39265.1| dihydroorotate dehydrogenase [Lachnospiraceae bacterium 5_1_57FAA]
Length = 300
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 161/328 (49%), Gaps = 34/328 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D I + G+++ NP + SG G+ + GAVV K V+ + N TPR A
Sbjct: 2 DTRINLAGVELKNPVMTASGTFGSGEEYSEFVDLNRLGAVVTKGVA-NVPWPGNATPRIA 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ G + IG +N I++ R + LK+F D +I ++ +
Sbjct: 61 ETKCGMMNA-----IGLQNPGIDVFCRRDIP-FLKQF--------DTRIIVNVCGRTTED 106
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E+++R+ + +D +E+N SCP+ ++ G A GQ+ R +E + + +A PV
Sbjct: 107 -YCEVVERLADEAVDMLEINISCPN---VKEGGIAFGQNPRAVETITAEVKKRARQPVIM 162
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+TDITE A+ A G++ +S INT+ M ID+ + + GG S A
Sbjct: 163 KLSPNVTDITETAKAAEAGGADVLSLINTLTG-MKIDIH----KRAFALANRTGGLSGPA 217
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ PIA+ V + +K + G+GG+ T DA EF+L GA V V T +
Sbjct: 218 IKPIAVRMVYQVGNAVK-------LPIIGMGGIATAEDAIEFLLAGATAVSVGTANFFNP 270
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
++ + E ++ +MK + F+ ++D G
Sbjct: 271 AATIE-VAEGIEQYMKQYGFAHVKDMIG 297
>gi|296133331|ref|YP_003640578.1| dihydroorotate dehydrogenase family protein [Thermincola potens JR]
gi|296031909|gb|ADG82677.1| dihydroorotate dehydrogenase family protein [Thermincola potens JR]
Length = 305
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 166/336 (49%), Gaps = 43/336 (12%)
Query: 45 PDLSITVNGLQMPNPFV-----IGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVIN 99
P+L++ + GLQM NP G GP Y + R GA+V K +L+ ++ N
Sbjct: 4 PNLAVNLGGLQMKNPVTTASGCFGFGPEYAPYIDLNR-----LGAIVVKGTTLEP-RLGN 57
Query: 100 VTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIA-SIME 158
R AG S IG +N + D + L K+ P + IA + +E
Sbjct: 58 PGVRIVETPAGILNS-----IGLQNPGV--DHFISKALPYLKEYDT--PVVVNIAGNTLE 108
Query: 159 EYNKAAWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA 217
+Y EL R+ G+ A+EVN SCP+ +K G G DC + EV +
Sbjct: 109 DY-----AELAKRLTAANGVAALEVNISCPN---VKKGGMVFGTDCFMAAEVIRTVKQHT 160
Query: 218 TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277
T+PV AK++PN+T+I E A+ +G++ ++ INT++ M ID+ T +P V G +T G
Sbjct: 161 TLPVIAKLSPNVTNIVEIAQGVAEAGADALALINTLLG-MAIDIHTRKP---VLG-NTVG 215
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
G S A+ P+A+ + +A+ + + + G+GG+ +G DA EFIL GA V V T
Sbjct: 216 GLSGPAIRPVAVRIIWQVAQAV-------NLPILGMGGIMSGEDAIEFILAGATAVAVGT 268
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
++ + L E ++ +M+ + I + GA+
Sbjct: 269 ANFVNPRATMDVL-EGIEQYMEKYGVKDINELVGAA 303
>gi|227890081|ref|ZP_04007886.1| dihydroorotate dehydrogenase 1B [Lactobacillus johnsonii ATCC
33200]
gi|227849525|gb|EEJ59611.1| dihydroorotate dehydrogenase 1B [Lactobacillus johnsonii ATCC
33200]
Length = 307
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 152/288 (52%), Gaps = 31/288 (10%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGA 111
GL + NP + SG G + FD GA+V KT + + N+ P+ A L G
Sbjct: 10 GLDLKNPIMPASGTFGFGDVPAAKKFDLNDLGAMVIKTTT-PHSTTGNLQPQIAVLNTGV 68
Query: 112 NGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIMEEYNKAAWEELID 170
S +G N ++ ++K+ L+ YP ++AS+ E ++A + E+
Sbjct: 69 LNS-----VGLTN------PGVDAVIKDKLTPLRNEYPALPIMASVGGE-DEAGYLEVAK 116
Query: 171 RVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNI 229
++ ++G ++A+E+N SCP+ + G + G ++EE+ I + +P++ K+TPN+
Sbjct: 117 KLSDSGLVNALEINVSCPN---VNQGGMSFGVHPDVVEELTKKIKSVVKIPIYVKLTPNV 173
Query: 230 TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL 289
TDIT+ A+ A G++G+S INT++ M ID++T +P V G++ GG S +AV PIA+
Sbjct: 174 TDITQIAKAAENGGADGLSLINTLLG-MEIDVETRKP---VLGHNI-GGLSGEAVKPIAI 228
Query: 290 GKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
+M+ + G+GG+ + D EFIL GAN V V T
Sbjct: 229 -------RMVHQVRESTTLPIIGMGGISSAKDVIEFILAGANAVAVGT 269
>gi|225376607|ref|ZP_03753828.1| hypothetical protein ROSEINA2194_02249 [Roseburia inulinivorans DSM
16841]
gi|225211490|gb|EEG93844.1| hypothetical protein ROSEINA2194_02249 [Roseburia inulinivorans DSM
16841]
Length = 301
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 164/332 (49%), Gaps = 34/332 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
++ + + G+ + NP + SG G+ + GAVV K V+ + N TPR A
Sbjct: 2 NMKVDLCGVTLNNPVMTASGTFGSGAEYAEFVDLNKLGAVVTKGVA-NVPWPGNPTPRVA 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ G + +G +N I+L +R + LK+F KI++ ++
Sbjct: 61 EVYGGMLNA-----VGLQNPGIDLFVERDIP-FLKQFDT-------KIMVNVC--GHSTE 105
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E+++R+ + +D +E+N SCP+ ++ G A GQD + +E + + A PV
Sbjct: 106 EYIEVVERLRDQPVDLLEINISCPN---VKEGGIAFGQDPKAVEAITKEMKKHAAQPVIM 162
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+TDITE AR A G++G+S INTI M ID+ + V T GG S A
Sbjct: 163 KLSPNVTDITEMARAAEAGGADGLSLINTITG-MKIDINRQK---FVLANKT-GGMSGPA 217
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+HP+A+ V A+ + + G+GG+ DA E IL GA V V T +
Sbjct: 218 IHPVAVRMVYQTAQAVS-------IPIVGMGGIMNAEDAIEMILAGATAVSVGTANFTNP 270
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
+ + + + ++D+M+ + + I+D GA E
Sbjct: 271 H-VTEEIVAGIRDYMERYQVADIKDLVGAVHE 301
>gi|78355103|ref|YP_386552.1| dihydroorotate dehydrogenase [Desulfovibrio alaskensis G20]
gi|78217508|gb|ABB36857.1| dihydroorotate dehydrogenase family protein [Desulfovibrio
alaskensis G20]
Length = 308
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 157/336 (46%), Gaps = 42/336 (12%)
Query: 46 DLSITV----NGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT 101
DL +T+ +GL++ NP + SG G G +V K +SL A + N
Sbjct: 2 DLHVTIPSGLHGLELKNPVMTASGTFGYGVEFAPYGDLARLGGIVVKGLSLKA-RAGNPM 60
Query: 102 PRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALY---PDKIL-IASIM 157
PR A G + Q G EN I+ + + +E + LY PD+ +A I+
Sbjct: 61 PRIAETACGMLNAVGLQNSGVEN--FITQKLPQLPWQETPVIANLYACDPDEFAELAGIL 118
Query: 158 EEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA 217
E GI AIEVN SCP+ + G GQD R V G + ++
Sbjct: 119 --------------AAEEGIAAIEVNISCPN---VSEGGILFGQDARQAARVTGAVKRRS 161
Query: 218 -TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTP 276
T PV K++PN+TDI E AR SG++ +S INT +S M +D+++ +P +
Sbjct: 162 GTKPVIVKLSPNVTDIAEIARAVEDSGADMLSCINT-LSGMAVDIRSRKPLLA----NVI 216
Query: 277 GGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336
GG S A+ P+AL V A+ + + GIGG T D EF+L+GA+ VQ+
Sbjct: 217 GGLSGPAIKPVALRCVWQAARSVS-------IPVIGIGGATTAEDILEFMLVGAHAVQIG 269
Query: 337 TGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
T M RL +EL+ + +S +DFRG+
Sbjct: 270 TANFMR-PDCAFRLVDELQQLVDTLGITSWDDFRGS 304
>gi|408411115|ref|ZP_11182298.1| Dihydroorotate oxidase [Lactobacillus sp. 66c]
gi|407874778|emb|CCK84104.1| Dihydroorotate oxidase [Lactobacillus sp. 66c]
Length = 309
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 166/328 (50%), Gaps = 35/328 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYA 105
+++++ GL++ NP + SG + + FD + GA+V KT + A + N P+ A
Sbjct: 7 MAVSLPGLKLKNPVMPASGT--FAFGDLPENFDWDQMGAIVIKTATRHA-RTGNPKPQIA 63
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
L G + +G N E+++ + + K+ +PD ++AS+ E +
Sbjct: 64 LLEDGVMNA-----VGLTNPGCEVVASEKIPALRKK-------HPDLPIMASVGGESVQD 111
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E+ + + DA+E+N SCP+ + G G ++EE+ + + +PV+
Sbjct: 112 -YLEVAEILASAKPDALELNLSCPN---VSEGGMTFGIVPEMVEEITKKVKERVDIPVYV 167
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K+TPN+TDIT A+ A R G++G++ INT++ + +DLKT RP V G GG S +A
Sbjct: 168 KLTPNVTDITAIAKAAERGGADGLTLINTLLG-LHLDLKTRRP---VLGNDF-GGLSGQA 222
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
V P+A+ V + K + + + G+GG+ + DAAEFIL GA+ VQ+ +
Sbjct: 223 VKPVAVRMVAQVKKAV-------NLPIIGVGGINSAEDAAEFILAGASAVQIGSMAFRDK 275
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+K + + L + S + D G
Sbjct: 276 LA-IKHVVDALPGVLAGMGVSDVNDLVG 302
>gi|440780125|ref|ZP_20958713.1| dihydroorotate dehydrogenase family protein [Clostridium
pasteurianum DSM 525]
gi|440221801|gb|ELP61005.1| dihydroorotate dehydrogenase family protein [Clostridium
pasteurianum DSM 525]
Length = 362
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 152/332 (45%), Gaps = 42/332 (12%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+L + ++G++ NP ++ +GPP N ++ G G VV+KT+S +AA +
Sbjct: 3 NLKVKIDGMEFENPVMVAAGPPSRNAEMIIDCVKNGAGGVVSKTISTEAAHIPKPCMADY 62
Query: 106 RLRAGANGSAKGQIIGWENIELISD-RPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ R + N EL S+ P + KE+++ K I+ Y
Sbjct: 63 KTR-------------FLNTELWSELSPEHWIEKEYEKAKTCKAPLIVGMG----YTPEQ 105
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
LI RV++ DA E++ VG+D + A PV+ K
Sbjct: 106 ITNLIPRVDKFA-DAYEIS------------SHYVGRDITPVVNTLKAAKACTKKPVFMK 152
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVE-GYSTPGGYSCKA 283
++P I DI E R +G++G+ AIN++ ID++T P E GY G S A
Sbjct: 153 VSPGIADIGEFGRALQEAGADGLVAINSVGPCFAIDIETGLPNMGSEAGY---GWMSGAA 209
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ PIAL V + K +K + +GGV G D E + GA+ VQVCT ++ G
Sbjct: 210 IKPIALRHVYELCKSVK-------IPVLAVGGVTKGEDVIEMFMAGASAVQVCTQAIVEG 262
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
+R+ +E +++ H + SIED +G +IE
Sbjct: 263 NKAFRRIVKEANNWLDSHGYKSIEDIKGITIE 294
>gi|161508237|ref|YP_001577727.1| dihydroorotate dehydrogenase 1B [Lactobacillus helveticus DPC 4571]
gi|172048331|sp|A8YVZ9.1|PYRDA_LACH4 RecName: Full=Dihydroorotate dehydrogenase A (fumarate); Short=DHOD
A; Short=DHODase A; Short=DHOdehase A
gi|160349226|gb|ABX27900.1| Dihydroorotate dehydrogenase [Lactobacillus helveticus DPC 4571]
Length = 307
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 163/328 (49%), Gaps = 36/328 (10%)
Query: 49 ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARL 107
+ + GL + NP + SG G + FD GA+V KT + A N P+ A L
Sbjct: 6 VNLPGLDLKNPVMPASGTFGFGDVPAAQKFDLNDLGAMVIKTTT-PHATTGNPQPQIAIL 64
Query: 108 RAGANGSAKGQIIGWENI---ELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
G S +G N ++IS++ +L+ YPD ++AS+ + ++
Sbjct: 65 EDGVLNS-----VGLTNPGVDQVISEK--------LTKLRHQYPDLPIMASVGGD-SEDD 110
Query: 165 WEELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E+ ++ +G ++A+E+N SCP+ + G + G ++EE+ I +P++
Sbjct: 111 YVEVAKKLSASGLVNALEINVSCPN---VAQGGMSFGVHAGVVEELTKKIKMAVALPIYV 167
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K+TPN+TDI E A+ A G++G+S INT++ M ID+KT +P + G++ GG S +A
Sbjct: 168 KLTPNVTDIVEIAKAAESGGADGISMINTLLG-MRIDIKTRKP---LLGHNM-GGLSGEA 222
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
V PIA+ + + ++ + + G+GG+ T D EFIL GAN V V +
Sbjct: 223 VKPIAIRMISQVRQVTQ-------LPIIGMGGISTAQDVIEFILAGANAVAVGSAHFEDE 275
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
K + EEL ++ I D G
Sbjct: 276 LA-AKHIVEELPAELEKLGVEDINDLVG 302
>gi|366053433|ref|ZP_09451155.1| dihydroorotate dehydrogenase 1B [Lactobacillus suebicus KCTC 3549]
Length = 306
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 159/327 (48%), Gaps = 35/327 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L++ + GL + NP + SG + +R G++V K+ + + + N PR A
Sbjct: 6 LAVKLPGLDLKNPVIPASGTCWYGQELSERYDLNVLGSLVIKSTTKEPREG-NPKPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
AG + Q +G + + +SD+ L YPD +IAS +++ +
Sbjct: 65 TTAGWMNANGLQNVGVDAV--VSDK--------LPWLGDNYPDLPVIAS-AAGFSEDEYV 113
Query: 167 ELIDRVEET-GIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
+I R+ + ++AIEVN SCP HG G A+G D ++E + A +P++
Sbjct: 114 HVIQRLSTSPDVNAIEVNVSCPNVDHG------GMAMGTDPEVVERLVRKCEAVTDIPLY 167
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
K+TPNITDI A+ A R G++G++ INT+ +GIDLKT +P+ GG S
Sbjct: 168 VKLTPNITDIVPIAQAAERGGAQGLTMINTLTG-LGIDLKTRQPQLA----HVTGGLSGP 222
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
++ P+AL + + ++ D + G+GGV T D EF++ GAN V+V H
Sbjct: 223 SLKPMALHMIHQVRQV-------SDLPIIGVGGVTTAEDVLEFMMAGANAVEVGAA-SFH 274
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDF 369
++ +L M ++ S+ D
Sbjct: 275 DPLACPKIIADLPTVMDYYHVDSLTDL 301
>gi|168333707|ref|ZP_02691960.1| dihydroorotate dehydrogenase family protein [Epulopiscium sp. 'N.t.
morphotype B']
Length = 302
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 155/334 (46%), Gaps = 45/334 (13%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGW-----GAVVAKTVSLDAAKVINV 100
DLS+ + G+ NP SG T +A E + GAV+ K VS + N
Sbjct: 3 DLSVALCGINFKNPLTTASG------TFSTQASSEFYNPSELGAVITKGVSSEPWDG-NP 55
Query: 101 TPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIAS--IME 158
TPR A G S Q G + E IS E L + I+ + +E
Sbjct: 56 TPRIAETYGGMLNSIGLQNPGVD--EFISS--------ELPLLSKFNTNVIVNVAGRTIE 105
Query: 159 EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
+Y K +++++ ET +D +E+N SCP+ + G G D +L V + +T
Sbjct: 106 DYCK-----VVEKLNETTVDMLEINISCPN---VKCGGIGFGTDAKLAASVTKAVRHIST 157
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
P+ K+TPN+TDITE A+ G++ +S INT++ M ID+ P + GG
Sbjct: 158 KPLIIKLTPNVTDITEIAKAVEAEGADCISLINTLLG-MKIDVHKFSPIL----KNKVGG 212
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ PIA+ V + + + + G+GG+ TG D AEF+L GA+ V + T
Sbjct: 213 LSGPAIKPIAVRMVYQVRRAVA-------LPIIGLGGIATGEDVAEFLLAGADLVSIGTA 265
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
+H + + ++M+ HNF +I D + A
Sbjct: 266 C-LHNPLIFLDIKRTFTEYMEKHNFHTIADLKAA 298
>gi|374997196|ref|YP_004972695.1| dihydroorotate dehydrogenase family protein [Desulfosporosinus
orientis DSM 765]
gi|357215562|gb|AET70180.1| dihydroorotate dehydrogenase family protein [Desulfosporosinus
orientis DSM 765]
Length = 305
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 160/330 (48%), Gaps = 37/330 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL+ + G+ + NP V SG G + G + K ++ ++ N PR A
Sbjct: 5 DLTTQLAGITLRNPIVTCSGTYGFGEEYAPYCPVDSLGGITLKGIT-PLPRLGNPVPRLA 63
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI----MEEYN 161
AG S +G EN L + L+T L + +QL P ++ IA+I +E+Y
Sbjct: 64 ETPAGLLNS-----VGLENPGL--EEFLKTYLPKVRQL----PTEV-IANISGFSLEDYV 111
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
+ A +++G+ A+EVN SCP+ + G G D EEV + A +PV
Sbjct: 112 QLAQA----LQKDSGLAALEVNISCPN---VKHGGMHFGTDPGSAEEVISAVKAATDLPV 164
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
AK++PN+TDI AR A R G++ +S INT++ M ID+ RP +T GG S
Sbjct: 165 IAKLSPNVTDIVAMARAAQRGGADVLSLINTLLG-MQIDIHQQRPVLA----NTFGGLSG 219
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
A+ P+AL +M+ F D + G+GG+ T DA EF+L GA V + TG +
Sbjct: 220 PAIKPVAL-------RMVWQVFAAVDLPIIGMGGIVTWQDAVEFLLAGATAVSIGTGNFV 272
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ ++ L + D+ + +S+ D G
Sbjct: 273 NPQAPLEIL-RGITDYCRQRGVASVGDLVG 301
>gi|442804121|ref|YP_007372270.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit PyrD
[Clostridium stercorarium subsp. stercorarium DSM 8532]
gi|442739971|gb|AGC67660.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit PyrD
[Clostridium stercorarium subsp. stercorarium DSM 8532]
Length = 301
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 165/340 (48%), Gaps = 50/340 (14%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGW-----GAVVAKTVSLDAAKVINV 100
DL++ + GL++ NP + SG G R F E + G + K ++L A + N
Sbjct: 2 DLTVNIAGLKLKNPVIAASGTFG-----FGREFSEFFDLNLLGGISVKGLTL-APRKGNP 55
Query: 101 TPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI---- 156
PR A AG S Q G + D L++F D +IA++
Sbjct: 56 PPRIAETPAGILNSVGLQNPGVH--AFVRDE--IPFLRKF--------DTCIIANVAGNT 103
Query: 157 MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAV-GQDCRLLEEVCGWINA 215
+E+Y + A + + + IDAIE+N SCP+ K G + G + +V +
Sbjct: 104 VEDYCRMA-----EILSDADIDAIELNVSCPN----VKEGCLIFGSTAEGISKVTSAVRK 154
Query: 216 KATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYST 275
+ K++PN+TDITE A+ A SG++ VS INTI+ M ID+ + RP V G +
Sbjct: 155 VCKKTLIVKLSPNVTDITEMAKAAEYSGADCVSLINTILG-MAIDINSRRP---VLG-NV 209
Query: 276 PGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQV 335
GG S AV PIA+ V ++K +K + G+GG+ DA EF+L GA+ V +
Sbjct: 210 VGGLSGPAVKPIAVRMVYQVSKAVK-------IPVIGMGGISNADDAVEFMLAGASAVMI 262
Query: 336 CTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
T ++ Y ++ + E +K +M+ H F + D GA IE
Sbjct: 263 GTAGFVNPYVWIETI-EGIKQYMEKHGFQKVSDITGALIE 301
>gi|294496112|ref|YP_003542605.1| dihydroorotate oxidase B, catalytic subunit [Methanohalophilus
mahii DSM 5219]
gi|292667111|gb|ADE36960.1| dihydroorotate oxidase B, catalytic subunit [Methanohalophilus
mahii DSM 5219]
Length = 299
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 151/325 (46%), Gaps = 30/325 (9%)
Query: 51 VNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAG 110
+ G+++ NP ++ SG GT + R G GAVV K++ K N P L G
Sbjct: 3 IAGIELKNPTILASGIMGTTGAALARMSRNGAGAVVTKSIGPVPNKGHN-NPSMVELECG 61
Query: 111 ANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELID 170
+ N + + +E K+ D LIASI + A + E+ +
Sbjct: 62 -----------YINAMGLPNPSYSGFCEEIGIAKS-KTDAPLIASIFGG-DAAEFTEVAN 108
Query: 171 RVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNIT 230
+ + D E+N SCPH GA+VG D L+ E+ + VPVW K+TPN+T
Sbjct: 109 GLLSSKPDCFELNVSCPHA---EGYGASVGTDPDLVHEITASVVDAVDVPVWVKLTPNVT 165
Query: 231 DITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALG 290
DIT R A +G+ V AINT+ M ID+ + P + G + GG S AV P+A+
Sbjct: 166 DITSIGRAAESAGASAVVAINTVRG-MAIDIHSGYP---ILG-NRFGGLSGPAVKPVAV- 219
Query: 291 KVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRL 350
K + + D + G+GG+ DA E IL GA+ V++ + V + + +
Sbjct: 220 ------KCVYDLYEALDIPVIGVGGITCPQDAIEMILAGASAVEIGSAV-HDDTQIFETI 272
Query: 351 CEELKDFMKMHNFSSIEDFRGASIE 375
+ + +++ + +S ED G S E
Sbjct: 273 SKGIDTYLQKYGYSKTEDITGLSHE 297
>gi|410671687|ref|YP_006924058.1| dihydroorotate dehydrogenase 1B [Methanolobus psychrophilus R15]
gi|409170815|gb|AFV24690.1| dihydroorotate dehydrogenase 1B [Methanolobus psychrophilus R15]
Length = 300
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 154/323 (47%), Gaps = 30/323 (9%)
Query: 49 ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLR 108
I + G+++ NP ++ +G GT + R EG GAVV K++ + P+
Sbjct: 2 IEITGIRLNNPTILAAGVMGTTGASLARIAWEGAGAVVTKSIGPE--------PKGGH-- 51
Query: 109 AGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEEL 168
+N S G+ N + + E + K D +IASI N + +
Sbjct: 52 --SNPSMIDLGYGFLNAMGLPNPSYPDFSGEIEIAKK-EADVPVIASIFGG-NAQEFAIV 107
Query: 169 IDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPN 228
D + + G DA E+N SCPH + GA++G D +EE+ + +PVW K+TPN
Sbjct: 108 ADGLVDAGPDAFELNVSCPH---AQGYGASIGCDACAVEEITAAVCDITELPVWVKLTPN 164
Query: 229 ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288
+TDI + A R G++ V AINT+ M ID+ + P V G + GG S +A+ P+A
Sbjct: 165 VTDIVSIGKAAQRGGADAVVAINTVRG-MAIDIHSGYP---VLG-NRFGGLSGRAIKPVA 219
Query: 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVK 348
+ K + + D + G+GG+ T DA E ++ GA+ VQ+ + V G G+ +
Sbjct: 220 I-------KCVYDLYAALDIPIIGVGGISTWEDAVEMMMAGASAVQIGSAV-HDGPGIFQ 271
Query: 349 RLCEELKDFMKMHNFSSIEDFRG 371
+ + ++ FM + D G
Sbjct: 272 TVADGIESFMSSGGYRDTSDIVG 294
>gi|167749376|ref|ZP_02421503.1| hypothetical protein EUBSIR_00328 [Eubacterium siraeum DSM 15702]
gi|167657657|gb|EDS01787.1| dihydroorotate oxidase [Eubacterium siraeum DSM 15702]
gi|291556258|emb|CBL33375.1| dihydroorotate oxidase B, catalytic subunit [Eubacterium siraeum
V10Sc8a]
Length = 306
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 157/334 (47%), Gaps = 38/334 (11%)
Query: 42 SAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT 101
S +PD+S+ V G NP + SG G G + K +L+ K N+
Sbjct: 2 SFKPDISVDVCGKHFKNPVIAASGAYGFGEDYTDLYPLSALGGISCKGTTLNK-KDGNIP 60
Query: 102 PRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI----M 157
PR A +G S +G +N + D+ + L + D ++IA+I +
Sbjct: 61 PRIAETPSGILNS-----VGLQNPGV--DKFINYYLPRLRT-----QDTVVIANIAGAVI 108
Query: 158 EEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA 217
++Y A ++++ T +D IE+N SCP+ ++ GA G C V +
Sbjct: 109 DDYIAVA-----EKLDATDVDMIELNISCPN---VKQGGATWGVTCEGAASVTRAVRNAT 160
Query: 218 TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277
PV K+TPN+T+ITE A+ G++ VS INT++ M ID++T RP ++ G
Sbjct: 161 KKPVIVKLTPNVTNITEIAKAVEAEGADSVSLINTLLG-MRIDIRTRRPIL----HNNVG 215
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
G S AV P+A+ V +A +K + G+GG+ T DA E ++ GA+ VQ+ T
Sbjct: 216 GLSGPAVFPVAVRMVWQVANAVK-------IPVIGMGGIATAEDAIEMMMAGASAVQMGT 268
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ Y +K +CE ++ F+ I D G
Sbjct: 269 AIFNDPYAPIK-VCEGMEKFLAEQKIEKISDIVG 301
>gi|421766905|ref|ZP_16203673.1| Dihydroorotate dehydrogenase, catalytic subunit [Lactococcus
garvieae DCC43]
gi|407624701|gb|EKF51436.1| Dihydroorotate dehydrogenase, catalytic subunit [Lactococcus
garvieae DCC43]
Length = 311
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 160/331 (48%), Gaps = 41/331 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L++ + GL + NP + SG G + G+++ K +L A + N TPR A
Sbjct: 4 LTVKLPGLDLKNPIMPASGCFGFGEDYARYYDLNQLGSIMIKATTLQA-RYGNPTPRVAE 62
Query: 107 LRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIM--EEYNK 162
+G + IG +N ++++ L + K F +L +IA++ EEY+
Sbjct: 63 TSSGMLNA-----IGLQNPGLDVVMSDKLPWLDKHFPELP-------IIANVAGSEEYDY 110
Query: 163 AAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219
A I + AIE+N SCP HG G A G D ++ ++ A V
Sbjct: 111 VAVCAKIGTAPN--VKAIELNISCPNVKHG------GQAFGTDPKVAYDLVRACKEVADV 162
Query: 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279
P++ K++PN+TDI E A+ +G++G++ INT+M M DLKT +P + GG
Sbjct: 163 PLYVKLSPNVTDIVEIAKAIEAAGADGITMINTLMG-MRYDLKTRKPILA----NITGGL 217
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S A+ P+AL V +A+ + + + G+GGV T D EF + GA+ V V T
Sbjct: 218 SGPAIKPVALKLVHQVAQAV-------ELPIIGMGGVMTAQDVLEFYMAGASAVAVGTAN 270
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
Y + ++ +EL + M + SS+E+ R
Sbjct: 271 FSDPY-VCPKIIDELPELMDKYGISSLEELR 300
>gi|385813517|ref|YP_005849910.1| Dihydroorotate dehydrogenase 1B [Lactobacillus helveticus H10]
gi|323466236|gb|ADX69923.1| Dihydroorotate dehydrogenase 1B [Lactobacillus helveticus H10]
Length = 307
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 162/328 (49%), Gaps = 36/328 (10%)
Query: 49 ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARL 107
+ + GL + NP + SG G + FD GA+V KT + A N P+ A L
Sbjct: 6 VNLPGLDLKNPVMPASGTFGFGDVPAAQKFDLNDLGAMVIKTTT-SHATTGNPQPQIAIL 64
Query: 108 RAGANGSAKGQIIGWENI---ELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
G S +G N ++IS++ +L+ YPD ++AS+ + ++
Sbjct: 65 EDGVLNS-----VGLTNPGVDQVISEK--------LTKLRHQYPDLPIMASVGGD-SEDD 110
Query: 165 WEELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E+ ++ +G ++A+E+N SCP+ + G + G ++EE+ I +P++
Sbjct: 111 YVEVAKKLSASGLVNALEINVSCPN---VAQGGMSFGVHAGVVEELTKKIKTAVALPIYV 167
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K+TPN+TDI E A+ A G++G+S INT++ M ID+KT +P + G++ GG S +A
Sbjct: 168 KLTPNVTDIVEIAKAAESGGADGISMINTLLG-MRIDIKTRKP---LLGHNM-GGLSGEA 222
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
V PIA+ +M+ + G+GG+ + D EF+L GAN V V T +
Sbjct: 223 VKPIAI-------RMISQVRQATTLPIIGMGGINSAQDVIEFMLAGANAVAVGTA-HFND 274
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
K + EEL ++ I D G
Sbjct: 275 ELASKHIAEELPAELEKLGIEDINDLVG 302
>gi|312135772|ref|YP_004003110.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor
owensensis OL]
gi|311775823|gb|ADQ05310.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor
owensensis OL]
Length = 381
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 156/335 (46%), Gaps = 41/335 (12%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
P+LS T L + P ++ S ++R + G GAVV K++ I TPR+
Sbjct: 2 PNLSTTYAKLNLRTPVIVASAGITGTVERLQRCEENGAGAVVTKSLFQKEVCRIAPTPRF 61
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
++ + + +E + + + KQ K P +IASI Y A
Sbjct: 62 KIVKHENTFT----LYSYEQASEFDPQEYAEFIFKAKQ-KLSIP---VIASI-NCYTDDA 112
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG---WINAKATVPV 221
W E +E+ G DAIE+N SCPHG+ G D ++EE+ + + +PV
Sbjct: 113 WIEYSKLMEQAGADAIELNLSCPHGV-----HIMSGMD--VIEEMVHTTKLVKSNVKIPV 165
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG-YSTPGGYS 280
KMTP T+ P ALR G + G+D+ + P + G Y+ GG
Sbjct: 166 IPKMTPQSTN---PGSDALRLDQAGADGLVMFNRFTGLDIDIEKEAPILHGGYAGHGG-- 220
Query: 281 CKAVHPIA----LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336
P A L + ++A +K S+S GG G D ++IL GA+ VQVC
Sbjct: 221 -----PWAIMYGLRWISAVAPKVKC-------SISASGGAMNGEDVVKYILAGASAVQVC 268
Query: 337 TGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
T V+++GYG++ ++ + L+++M+ + +I+DF+G
Sbjct: 269 TTVILNGYGVINKINKYLEEYMERKGYYTIDDFKG 303
>gi|42519206|ref|NP_965136.1| dihydroorotate dehydrogenase 1B [Lactobacillus johnsonii NCC 533]
gi|81832219|sp|Q74J29.1|PYRDA_LACJO RecName: Full=Dihydroorotate dehydrogenase A (fumarate); Short=DHOD
A; Short=DHODase A; Short=DHOdehase A
gi|41583494|gb|AAS09102.1| dihydroorotate dehydrogenase [Lactobacillus johnsonii NCC 533]
Length = 307
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 153/288 (53%), Gaps = 31/288 (10%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGA 111
GL + NP + SG G + F+ GA+V KT + + N P+ A L G
Sbjct: 10 GLDLKNPIMPASGTFGFGDVPAAKKFNLNDLGAMVIKTTT-PHSTTGNPQPQIAVLNTGV 68
Query: 112 NGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIMEEYNKAAWEELID 170
S +G N ++ ++K+ L++ YP+ ++AS+ E ++A + E+
Sbjct: 69 LNS-----VGLTN------PGVDAVIKDKLTPLRSEYPNLPIMASVGGE-DEAGYLEVAK 116
Query: 171 RVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNI 229
++ ++G ++A+E+N SCP+ + G + G ++EE+ I + +P++ K+TPN+
Sbjct: 117 KLSDSGLVNALEINVSCPN---VNQGGMSFGVHPDVVEELTKKIKSLVKIPIYVKLTPNV 173
Query: 230 TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL 289
TDIT+ A+ A G++G+S INT++ M ID++T +P V G++ GG S +AV PIA+
Sbjct: 174 TDITQIAKAAENGGADGLSLINTLLG-MEIDVETRKP---VLGHNI-GGLSGEAVKPIAI 228
Query: 290 GKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
+M+ + G+GG+ + D EFIL GAN V V T
Sbjct: 229 -------RMVHQVRESTTLPIIGMGGISSAKDVIEFILAGANAVAVGT 269
>gi|413921648|gb|AFW61580.1| hypothetical protein ZEAMMB73_605285 [Zea mays]
Length = 323
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 77/117 (65%), Gaps = 6/117 (5%)
Query: 27 LPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVV 86
LP R + + +++ EPDLS+ VNGLQM G G GT++ ++
Sbjct: 200 LPGRQRATYVRATASAGEPDLSVRVNGLQMQ----WGRG--GTDFRSLRTCSSYADVQQS 253
Query: 87 AKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQL 143
A VSLDA K+INVTPRYA+LR NG+A G+IIGW+NIELISDRPLETML EFKQL
Sbjct: 254 AVAVSLDAEKIINVTPRYAKLRTEPNGAAMGRIIGWQNIELISDRPLETMLNEFKQL 310
>gi|451945877|ref|YP_007466472.1| dihydroorotate dehydrogenase family protein [Desulfocapsa
sulfexigens DSM 10523]
gi|451905225|gb|AGF76819.1| dihydroorotate dehydrogenase family protein [Desulfocapsa
sulfexigens DSM 10523]
Length = 310
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 156/333 (46%), Gaps = 37/333 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL +++ L + NP + SG G M GAVV K +SL+ + N PR
Sbjct: 9 DLRVSIGTLSLRNPVMTASGTFGYAREFMPYVNLHRLGAVVVKGISLEP-RSGNPPPRIV 67
Query: 106 RLRAGANGSAKGQIIGWENI---ELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNK 162
AG + IG EN+ ISD+ L+ + P + + + + ++
Sbjct: 68 ETSAGMLNA-----IGLENVGVERFISDK--------MASLQGI-PVPVFVNILGDTLDE 113
Query: 163 AAWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
++E+ R+ G+ IEVN SCP+ +K G A G + V + A++TVPV
Sbjct: 114 --YKEIAARLAGVQGVSGIEVNISCPN---VKKGGVAFGTVPEMAAAVTSAVKAESTVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
K++PN+TDI+ AR +G++ VS INT++ M ID ++ RP + GG S
Sbjct: 169 VVKLSPNVTDISAIARSVEDAGADAVSLINTLIG-MAIDSRSRRPRLA----NVIGGLSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
A+ P+AL V +A+ + + GIGG+ET D EF+L GA VQ+ T +
Sbjct: 224 PAIKPVALRMVYQVAQAV-------SIPVIGIGGIETAEDVVEFMLAGATAVQIGTANFV 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+ + E L ++ S+ + G I
Sbjct: 277 NPRA-SEDAVEGLAHYVAEQKLGSVRELIGGLI 308
>gi|418130127|ref|ZP_12767011.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA07643]
gi|418186974|ref|ZP_12823503.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47360]
gi|418229709|ref|ZP_12856315.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae EU-NP01]
gi|419477628|ref|ZP_14017453.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA18068]
gi|421242912|ref|ZP_15699433.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2081074]
gi|421270575|ref|ZP_15721431.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Streptococcus pneumoniae SPAR48]
gi|353803419|gb|EHD83711.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA07643]
gi|353852799|gb|EHE32785.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47360]
gi|353889615|gb|EHE69385.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae EU-NP01]
gi|379567010|gb|EHZ31997.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA18068]
gi|395609611|gb|EJG69697.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2081074]
gi|395868370|gb|EJG79488.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Streptococcus pneumoniae SPAR48]
Length = 312
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 162/336 (48%), Gaps = 35/336 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ ++IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLLIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKA--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYF 377
+ Y + E L M + SS+E+ R E+
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLEELRQEVKEFL 311
>gi|315612974|ref|ZP_07887885.1| dihydroorotate dehydrogenase B [Streptococcus sanguinis ATCC 49296]
gi|315315084|gb|EFU63125.1| dihydroorotate dehydrogenase B [Streptococcus sanguinis ATCC 49296]
Length = 328
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 158/332 (47%), Gaps = 41/332 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 22 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 80
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP +IA++ +EY
Sbjct: 81 TPAGMLNA-----IGLQN------PGLEAVLAEKLPWLEREYPTLPIIANVAGFSKQEY- 128
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
AA I + T + AIE+N SCP HG G +GQD L EV +
Sbjct: 129 -AAVSRGISKA--TNVKAIELNISCPNVDHG----NHGLLIGQDPDLAYEVVKAAVEASD 181
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VPV+ K+TP++TD+ A+ A +G+ G++ INT++ M DLKT +P + T GG
Sbjct: 182 VPVYVKLTPSVTDVVTIAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GG 236
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 237 MSGPAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTA 289
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+ED R
Sbjct: 290 NFTNPYA-CPDIIEHLPKVMDKYGISSLEDLR 320
>gi|240143893|ref|ZP_04742494.1| dihydroorotate oxidase [Roseburia intestinalis L1-82]
gi|257204085|gb|EEV02370.1| dihydroorotate oxidase [Roseburia intestinalis L1-82]
gi|291535019|emb|CBL08131.1| dihydroorotate dehydrogenase (subfamily 1) family protein
[Roseburia intestinalis M50/1]
gi|291539583|emb|CBL12694.1| dihydroorotate dehydrogenase (subfamily 1) family protein
[Roseburia intestinalis XB6B4]
Length = 302
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 161/329 (48%), Gaps = 34/329 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
++ + + G+ + NP + SG G + GAVV K V+ + N TPR A
Sbjct: 2 NMKVDLCGVTLNNPVMTASGTFGAGEEYSEFVDLNRLGAVVTKGVA-NVPWEGNPTPRVA 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ G + IG +N I+L +R + + K Y +I++ + +
Sbjct: 61 EVYGGMLNA-----IGLQNPGIDLFIERDIPFLKK--------YDTRIVVNVC--GHTTS 105
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E++DR+ + +D +E+N SCP+ ++ G A GQ+ +++E++ I A A PV
Sbjct: 106 EYIEVVDRLADQPVDLLEINISCPN---VKEGGIAFGQNPKMVEDITREIKAHAKQPVIM 162
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+TDITE AR A G++G+S INT+ M ID+ + GG S A
Sbjct: 163 KLSPNVTDITEMARAAEAGGADGLSLINTLTG-MKIDIH----RRTFALANRTGGMSGPA 217
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
VHP+A+ V A+ + + + G+GG+ DA E IL GA V V T +
Sbjct: 218 VHPVAVRMVYQTAQAV-------NIPIVGMGGIMNADDAIEMILAGATAVSVGTANFTNP 270
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
+ + + ++D+M+ + I++ GA
Sbjct: 271 Q-VTMEIVDGIRDYMERYQVKDIKELVGA 298
>gi|452210326|ref|YP_007490440.1| Dihydroorotate dehydrogenase, catalytic subunit [Methanosarcina
mazei Tuc01]
gi|452100228|gb|AGF97168.1| Dihydroorotate dehydrogenase, catalytic subunit [Methanosarcina
mazei Tuc01]
Length = 314
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 155/330 (46%), Gaps = 31/330 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGW-GAVVAKTVSLDAAKVINVTPRYA 105
L T+ GL++ NP ++ +G GT + R EG GAVV K++ A K + P
Sbjct: 13 LMYTLTGLKLKNPTILAAGVLGTTGASLCRVAREGGAGAVVTKSIG-PAPKTGHPNPSMI 71
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G + N + + L+E + K D +IASI + +
Sbjct: 72 ELDCG-----------FLNAMGLPNPSYPGFLQELEFAKE-NSDAPVIASIFGG-TPSEF 118
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+ + + DA E+N SCPH GAA+G + L+E V + VPVW K+
Sbjct: 119 SEVAEGLLPAKPDAFELNVSCPHA---EGYGAAIGTNPCLVEAVTAAVKDVVNVPVWVKL 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+ DIT A G++ V AINT+ M ID+++ P V G + GG S KAV
Sbjct: 176 TPNVADITCIGNAAESGGADAVVAINTVKG-MAIDIESGYP---VLGNRS-GGLSGKAVK 230
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
P+A+ K + F + + G+GGV + DA E I+ GA VQV + V
Sbjct: 231 PVAV-------KCVYDLFTALEIPVIGVGGVSSWEDAVEMIMAGAAAVQVGSAVYDR-LD 282
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
+ + +E++ F+K +S I+ G + E
Sbjct: 283 IFSEIGKEIEAFLKRKGYSDIKKITGLAHE 312
>gi|30173323|sp|Q8PW56.1|PYRDB_METMA RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|20906259|gb|AAM31441.1| Dihydroorotate dehydrogenase [Methanosarcina mazei Go1]
Length = 314
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 155/330 (46%), Gaps = 31/330 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGW-GAVVAKTVSLDAAKVINVTPRYA 105
L T+ GL++ NP ++ +G GT + R EG GAVV K++ A K + P
Sbjct: 13 LMYTLTGLKLKNPTILAAGVLGTTGASLCRVAREGGAGAVVTKSIG-PAPKTGHPNPSMI 71
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
L G + N + + L+E + K D +IASI + +
Sbjct: 72 ELDCG-----------FLNAMGLPNPSYPGFLQELEFAKE-NSDAPVIASIFGG-TPSEF 118
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+ + + DA E+N SCPH GAA+G + L+E V + VPVW K+
Sbjct: 119 AEVAEGLLPAKPDAFELNVSCPHA---EGYGAAIGSNPCLVEAVTAAVKDVVNVPVWVKL 175
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+ DIT A G++ V AINT+ M ID+++ P V G + GG S KAV
Sbjct: 176 TPNVADITCIGNAAESGGADAVVAINTVKG-MAIDIESGYP---VLGNRS-GGLSGKAVK 230
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
P+A+ K + F + + G+GGV + DA E I+ GA VQV + V G
Sbjct: 231 PVAV-------KCVYDLFTALEIPVIGVGGVSSWEDAVEMIMAGAAAVQVGSAVYDR-VG 282
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
+ + + ++ F+K +S I+ G + E
Sbjct: 283 IFSEIGKGIEAFLKRKGYSDIKKITGLAHE 312
>gi|355671701|ref|ZP_09057970.1| dihydroorotate dehydrogenase [Clostridium citroniae WAL-17108]
gi|354815500|gb|EHF00093.1| dihydroorotate dehydrogenase [Clostridium citroniae WAL-17108]
Length = 300
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 163/329 (49%), Gaps = 34/329 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
++S+ + G++ NP + SG G+ + GAVV K V+ + A N TPR A
Sbjct: 2 NMSVNIAGVEFKNPVMEASGTFGSGMEYSEFVDLNRLGAVVTKGVA-NVAWPGNPTPRIA 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
G + IG +N IE+ + R + LK++ D +I ++ +
Sbjct: 61 ETYGGMINA-----IGLQNPGIEVFAKRDIP-FLKQY--------DTRIIVNVCGRTTED 106
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E+++R+ + +D +E+N SCP+ ++ G A GQD + +E + + A A P+
Sbjct: 107 -YVEVVERLGDEPVDMLEINISCPN---VKEGGIAFGQDPKAVEAITREVKAHAKQPIIM 162
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+TDIT A+ A G++ VS INT+ M ID+ + + GG S A
Sbjct: 163 KLSPNVTDITVMAKAAEAGGTDAVSLINTLTG-MKIDIH----KRAFALANRTGGLSGPA 217
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ P+A+ V +A+ +K + G+GG+ G DA EFIL GA+ V + T +
Sbjct: 218 IKPVAVRMVYQVAQAVK-------VPIIGMGGIRNGDDALEFILAGASAVAIGTANFHNP 270
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
Y V+ + E ++ +M+ + I GA
Sbjct: 271 YATVETV-EGIRAYMERYGIEDINQLIGA 298
>gi|407465365|ref|YP_006776247.1| dihydroorotate dehydrogenase family protein [Candidatus
Nitrosopumilus sp. AR2]
gi|407048553|gb|AFS83305.1| dihydroorotate dehydrogenase family protein [Candidatus
Nitrosopumilus sp. AR2]
Length = 303
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 156/328 (47%), Gaps = 31/328 (9%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
EP ++ ++ +Q+ P ++ SG G + V R + G GAVV K++S T
Sbjct: 2 EPSIATSIGQIQLDKPVMLASGILGISLDVFNRLYASGAGAVVTKSLS---------TAP 52
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ S KG GW N +S+ K + + + L+ S+ E++
Sbjct: 53 WEGYPNPTIFSVKGG--GWINAVGLSNPGASNFAKMIEPNQDVPIIVSLVGSVPEDF--- 107
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
E +I E I A E+N SCPH K+G VG D L++ + + VPV A
Sbjct: 108 --ETMIKEFENCKIKAYELNLSCPH---VAKVGLEVGDDPGLVKTIVSTVKKATNVPVIA 162
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K+ ++ A+ SG + ++AINT+ + M I+++T RP + GG S
Sbjct: 163 KVGLGTSNYLNTVSNAVDSGIDAITAINTVRA-MAINVETKRPILS----NKFGGLSGTP 217
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ PIAL V I+ S+F D + G GGV T DA EF L GA+ VQ+ + + +
Sbjct: 218 IKPIALRCVYEIS----SKF---DIPIIGCGGVSTWEDAVEFFLAGASAVQLGSAIGDNW 270
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
G+ + + ++MK +N+S+I+D G
Sbjct: 271 VGVFDDINRGILEYMKKNNYSTIKDMVG 298
>gi|293376323|ref|ZP_06622561.1| dihydroorotate dehydrogenase 1B [Turicibacter sanguinis PC909]
gi|325845267|ref|ZP_08168571.1| dihydroorotate oxidase, catalytic subunit [Turicibacter sp. HGF1]
gi|292645071|gb|EFF63143.1| dihydroorotate dehydrogenase 1B [Turicibacter sanguinis PC909]
gi|325488708|gb|EGC91113.1| dihydroorotate oxidase, catalytic subunit [Turicibacter sp. HGF1]
Length = 303
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 165/334 (49%), Gaps = 47/334 (14%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGW-----GAVVAKTVSLDAAKVINVT 101
L++ + GL++ NP + SG G R F E + G+++ K + D A+V N T
Sbjct: 4 LAVNLPGLELKNPVIPASGCFG-----FGREFAEYYDLSRLGSIMIKAAT-DEARVGNPT 57
Query: 102 PRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI----M 157
PR A G + IG +N + D +E L +Q D +IA++ +
Sbjct: 58 PRVAETPGGMLNA-----IGLQNPGV--DVIIECELPFLEQY-----DLPIIANVAGKTL 105
Query: 158 EEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA 217
EEY A + + + A+E+N SCP+ ++ G A G D ++ E+ I +
Sbjct: 106 EEYVTVAKK----ICQAPNVAALEINISCPN---VKEGGIAFGTDAKVAAELTKAIKEVS 158
Query: 218 TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277
TVPV+ K++PN+T++ E A+ +G++G++ INT++ M D+KT +P + T G
Sbjct: 159 TVPVYIKLSPNVTNVVEIAKAVEAAGADGITMINTLLG-MRFDMKTGKP---ILANGT-G 213
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
G S A+ P+AL +M+ + + + + G+GG+ET D EF GA+ V V T
Sbjct: 214 GLSGPAIKPVAL-------RMIHDVYKNVNIPIIGMGGIETAEDVLEFFYAGASAVAVGT 266
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
++ Y V + E+L + + F + D G
Sbjct: 267 ANFINPYVCVD-IIEQLPAVLDKYGFEKLSDATG 299
>gi|167761648|ref|ZP_02433775.1| hypothetical protein CLOSCI_04060 [Clostridium scindens ATCC 35704]
gi|167660791|gb|EDS04921.1| dihydroorotate oxidase [Clostridium scindens ATCC 35704]
Length = 300
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 161/328 (49%), Gaps = 34/328 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D I + G+++ NP + SG G+ + GAVV K V+ + N TPR A
Sbjct: 2 DTRINLAGVELKNPVMTASGTFGSGEEYSEFVDLNRLGAVVTKGVA-NVPWPGNATPRIA 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ G + IG +N I++ R + LK+F D +I ++ +
Sbjct: 61 ETKCGMMNA-----IGLQNPGIDVFCRRDIP-FLKQF--------DTRIIVNVCGRTTED 106
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E+++R+ + +D +E+N SCP+ ++ G A GQ+ + +E + + +A PV
Sbjct: 107 -YCEVVERLADEAVDMLEINISCPN---VKEGGIAFGQNPKAVETITAEVKKRARQPVIM 162
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+TDITE A+ A G++ +S INT+ M ID+ + + GG S A
Sbjct: 163 KLSPNVTDITETAKAAEAGGADVLSLINTLTG-MKIDIH----KRAFALANRTGGLSGPA 217
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ PIA+ V + +K + G+GG+ T DA EF+L GA V V T +
Sbjct: 218 IKPIAVRMVYQVGNAVK-------LPIIGMGGIATAEDAIEFLLAGATAVSVGTANFFNP 270
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
++ + E ++ +MK + F+ ++D G
Sbjct: 271 AATIE-VAEGIEQYMKQYGFAHVKDMIG 297
>gi|358464729|ref|ZP_09174689.1| dihydroorotate dehydrogenase 1B [Streptococcus sp. oral taxon 058
str. F0407]
gi|357066600|gb|EHI76745.1| dihydroorotate dehydrogenase 1B [Streptococcus sp. oral taxon 058
str. F0407]
Length = 328
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 160/332 (48%), Gaps = 41/332 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL++ NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 22 LQVSLPGLELKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 80
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP +IA++ +EY
Sbjct: 81 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPTLPIIANVAGFSKQEY- 128
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
AA + I + T + AIE+N SCP HG G +GQD L EV +
Sbjct: 129 -AAVSQGISKA--TNVKAIELNISCPNVDHG----NHGLLIGQDPDLAYEVVKAAVGASD 181
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VPV+ K+TP++TD+ A+ A +G+ G++ INT++ M DLKT +P + T GG
Sbjct: 182 VPVYVKLTPSVTDVVTIAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GG 236
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 237 MSGPAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTA 289
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 290 NFTNPYA-CPVIIENLPKVMDKYGISSLEELR 320
>gi|226325469|ref|ZP_03800987.1| hypothetical protein COPCOM_03274 [Coprococcus comes ATCC 27758]
gi|225206212|gb|EEG88566.1| dihydroorotate oxidase [Coprococcus comes ATCC 27758]
Length = 300
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 157/331 (47%), Gaps = 40/331 (12%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+ + + G++ NP + SG G+ + GAV K V+ + N TPR A
Sbjct: 2 DMRVNIAGVEWKNPVTVASGTFGSGEEFSEFVDLNKLGAVTTKGVA-NVPWPGNPTPRVA 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILI---ASIMEEY 160
+ G + IG +N I+L R + + Y KI++ EEY
Sbjct: 61 EVYGGMMNA-----IGLQNPGIDLFCKRDIPYLKN--------YDTKIIVNVCGHAPEEY 107
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
E+++R+ + ID +E+N SCP+ A GQD + +EE+ G I A P
Sbjct: 108 -----LEVVERLADEPIDMMEINISCPN---VNAGFLAFGQDAKHVEELTGQIKKIAKQP 159
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
+ K+TPN+TDITE A+ A G++ VS INT+ M ID+ R V + GG S
Sbjct: 160 IIMKLTPNVTDITEIAKAAEAGGADAVSLINTLTG-MKIDIN--RKTFAVANKT--GGVS 214
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
V PIA+ V +A+ + + + G+GG+ DA EF+L GA+ V V T
Sbjct: 215 GPIVKPIAVRMVYQVAQAV-------NIPIIGMGGISCAEDAIEFLLAGASAVSVGTA-N 266
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
H + + + ++ +MK + F S++D G
Sbjct: 267 FHNPAVTMEVIDGIEAYMKKNGFESVKDMVG 297
>gi|294795151|ref|ZP_06760285.1| dihydroorotate oxidase [Veillonella sp. 3_1_44]
gi|294453943|gb|EFG22318.1| dihydroorotate oxidase [Veillonella sp. 3_1_44]
Length = 316
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 163/345 (47%), Gaps = 49/345 (14%)
Query: 38 SDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEG--WGAVVAKTVSLDAA 95
+++ + P L+I G++M NP + SG F G + + + + A
Sbjct: 7 NNTVTPNPKLAIDYCGIKMKNPIIAASG-----------TFGNGPEYAGYLDLSNEVGAI 55
Query: 96 KVINVTPRYAR----LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKI 151
V +TP+ R S IG EN ++ ++ +L + K+ D
Sbjct: 56 SVKGLTPKGRHGNPGTRIAETPSGVLNCIGLENPG--AEHFVKEILPDIKKY-----DVP 108
Query: 152 LIASI----MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLE 207
L+A++ ++E+ A +D GI +EVN SCP+ E G A G D +++E
Sbjct: 109 LLANMSAGTIDEFTWMAETLSVD-----GIAGLEVNVSCPNVECE---GMAFGVDPKVVE 160
Query: 208 EVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPE 267
V + PV K++PN+TDI E A+ G GVS INT++ M ID+ +P
Sbjct: 161 SVTKAVRKVTDKPVIVKLSPNVTDIVEIAKAVEAGGGNGVSLINTLLG-MAIDIHRRKP- 218
Query: 268 PCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFIL 327
V G +T GG S AV P+AL +M+ + + G+GG+ TG DA EF++
Sbjct: 219 --VLG-NTYGGLSGPAVKPVAL-------RMVHQVYKGVTIPIIGLGGIMTGTDAIEFMM 268
Query: 328 LGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
GA VQV T M+ + R+ E+ ++++ +N +SI D GA
Sbjct: 269 AGAQAVQVGTATMVDPTA-ISRITREMSEYVEQYNLNSITDIVGA 312
>gi|149010390|ref|ZP_01831761.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae
SP19-BS75]
gi|147764871|gb|EDK71800.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae
SP19-BS75]
Length = 312
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I +V T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKV--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLEELR 304
>gi|197301626|ref|ZP_03166699.1| hypothetical protein RUMLAC_00353 [Ruminococcus lactaris ATCC
29176]
gi|197299356|gb|EDY33883.1| dihydroorotate oxidase [Ruminococcus lactaris ATCC 29176]
Length = 300
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 161/332 (48%), Gaps = 42/332 (12%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + G++ NP + SG G+ + GAV K V+ + N TPR A
Sbjct: 2 DMSVKIAGVEWKNPVTVASGTFGSGEEFSEFVDLNRLGAVTTKGVA-NVPWPGNPTPRVA 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIM----EE 159
+ G + IG +N I+L R + LK+F D +I ++ EE
Sbjct: 61 EVYGGMMNA-----IGLQNPGIDLFCKRDIP-YLKKF--------DTKIIVNVCGHAPEE 106
Query: 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219
Y E+++R+ + ID +E+N SCP+ A GQD + +EE+ G I A
Sbjct: 107 Y-----LEVVERLADEPIDMMEINISCPN---VNAGFLAFGQDAKHVEELTGQIKKIAKQ 158
Query: 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279
P+ K+TPN+TDITE A+ G++ VS INT+ M ID+ R V + GG
Sbjct: 159 PIIMKLTPNVTDITEIAKATEAGGADAVSLINTLTG-MKIDIN--RKTFAVANKT--GGV 213
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S V PIA+ V +A+ + + + G+GG+ DA EF+L GA+ V V T
Sbjct: 214 SGPIVKPIAVRMVYQVAQAV-------NIPIIGMGGISCAEDAIEFLLAGASAVSVGTA- 265
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
H + ++ + ++ +MK + F +++D G
Sbjct: 266 NFHDPAVTLKVIDGIEAYMKKNGFETVKDMVG 297
>gi|395240351|ref|ZP_10417533.1| Dihydroorotate dehydrogenase A (fumarate) [Lactobacillus gigeriorum
CRBIP 24.85]
gi|394476025|emb|CCI87510.1| Dihydroorotate dehydrogenase A (fumarate) [Lactobacillus gigeriorum
CRBIP 24.85]
Length = 305
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 160/334 (47%), Gaps = 44/334 (13%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRY 104
++ + + GL + NP + SG G + K AFD E GA V KTV TP+
Sbjct: 3 NIKVNLPGLSLKNPVMPASGTFG--FGDQKYAFDLEDLGAFVFKTV----------TPQE 50
Query: 105 ARLRAGANGSAKGQII---GW--ENIELISDRPLETMLKEFKQLKALYPDKILIASIM-- 157
G+ + QI W ++ L + + + K L+ +P+ ++ASI
Sbjct: 51 GL------GNPQPQIFVSQDWIMNSVGLTNPGVEAAIETKMKPLRLQHPNLPMVASIAGG 104
Query: 158 EEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA 217
E + E ID+ + +DA+EVN SCP+ + G G + +++E V I K
Sbjct: 105 TEQDYVDLAEKIDQAQV--VDALEVNLSCPN---VAEGGMLFGINSQIVERVIANIKNKV 159
Query: 218 TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277
++PV+AK+TPN+TDI E AR A G++G+S INT+ + ID+KT +P V G + G
Sbjct: 160 SLPVYAKLTPNVTDIAEIARAAQSGGADGISLINTVYG-LEIDIKTRKP---VLG-NNAG 214
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
G S K+V P+AL +M+ + + G+GG+ + D +F L GA V V +
Sbjct: 215 GLSGKSVQPLAL-------RMVHDVYEATKLPIIGMGGIYSAEDVVKFFLAGARAVAVGS 267
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
VK + + L + + I D G
Sbjct: 268 AHFEDHQAAVK-IVQALPELLAELGVDDINDLVG 300
>gi|328949335|ref|YP_004366672.1| dihydroorotate dehydrogenase family protein [Treponema
succinifaciens DSM 2489]
gi|328449659|gb|AEB15375.1| dihydroorotate dehydrogenase family protein [Treponema
succinifaciens DSM 2489]
Length = 591
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 162/337 (48%), Gaps = 41/337 (12%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPG--TNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINV 100
EPDLS+ + G++ NP + SG G NY + FD G + +K ++L A K N
Sbjct: 283 EPDLSVEIAGIKFKNPVIAASGTFGFGQNY---RGFFDVSRLGGISSKGLTL-APKGGNS 338
Query: 101 TPRYARLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASI-- 156
R + +G S IG EN + L MLK D + IA++
Sbjct: 339 GERVIEVSSGDINS-----IGLENPGVPHFIQNELPEMLKL---------DTVSIANLAG 384
Query: 157 --MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWIN 214
++ Y K A EL+D+ T + AIE+N SCP+ + G A G + +
Sbjct: 385 HDLDSYIKGA--ELLDK---TPVPAIELNISCPN---VKAGGMAWGINPEAAFTCVSAVR 436
Query: 215 AKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYS 274
+ P+ K++PN D+ A +++G+ +S INTI +V ID+++ RP +
Sbjct: 437 KATSKPLIVKLSPNAPDLVSVALACIKAGANALSLINTIQAV-AIDIESGRPV----FDN 491
Query: 275 TPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQ 334
G AV PIAL V + K + S ++ + G+GG+ DA EFI+ GA+ +Q
Sbjct: 492 IKAGLCGPAVKPIALRMVYDVVKAVNSLPKEQQIPVIGLGGISKWQDAVEFIMAGASAIQ 551
Query: 335 VCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
V T + +++ + E LK FM+ H + IEDFRG
Sbjct: 552 VGTATFSNPKTMIE-IIEGLKKFMQSHGYKKIEDFRG 587
>gi|421488731|ref|ZP_15936119.1| dihydroorotate oxidase [Streptococcus oralis SK304]
gi|400367948|gb|EJP20963.1| dihydroorotate oxidase [Streptococcus oralis SK304]
Length = 312
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 159/332 (47%), Gaps = 41/332 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYSKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEAVLAEKLPWLEREYPTLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
AA + I + + AIE+N SCP HG G +GQD L EV +
Sbjct: 113 -AAVSQGISKA--ANVKAIELNISCPNVDHG----NHGLLIGQDPDLAYEVVKAAVEASD 165
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VPV+ K+TP++TD+ A+ A +G+ G++ INT++ M DLKT +P + T GG
Sbjct: 166 VPVYVKLTPSVTDVVTIAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GG 220
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 221 MSGPAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTA 273
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L+ M + SS+ED R
Sbjct: 274 NFTNPYA-CPDIIENLQKVMDKYGISSLEDLR 304
>gi|307703749|ref|ZP_07640690.1| dihydroorotate dehydrogenase family protein [Streptococcus oralis
ATCC 35037]
gi|419778886|ref|ZP_14304767.1| dihydroorotate oxidase, catalytic subunit [Streptococcus oralis
SK10]
gi|307622584|gb|EFO01580.1| dihydroorotate dehydrogenase family protein [Streptococcus oralis
ATCC 35037]
gi|383186650|gb|EIC79115.1| dihydroorotate oxidase, catalytic subunit [Streptococcus oralis
SK10]
Length = 312
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 159/332 (47%), Gaps = 41/332 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N L E +L E L+ YP +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQNPGL------EAVLAEKLPWLEREYPSLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
AA + I + T + AIE+N SCP HG G +GQD L EV +
Sbjct: 113 -AAVSQGISKA--TNVKAIELNISCPNVDHG----NHGLLIGQDPDLAYEVVKAAVEASD 165
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VPV+ K+TP++TD+ A+ A +G+ G++ INT++ M DLKT +P + T GG
Sbjct: 166 VPVYVKLTPSVTDVVTIAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GG 220
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 221 MSGPAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTA 273
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 274 NFTNPYA-CPDIIENLPKVMDKYGISSLENLR 304
>gi|293365211|ref|ZP_06611928.1| dihydroorotate dehydrogenase B [Streptococcus oralis ATCC 35037]
gi|291316661|gb|EFE57097.1| dihydroorotate dehydrogenase B [Streptococcus oralis ATCC 35037]
Length = 328
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 159/332 (47%), Gaps = 41/332 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 22 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 80
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP +IA++ +EY
Sbjct: 81 TPAGMLNA-----IGLQN------PGLEAVLAEKLPWLEREYPSLPIIANVAGFSKQEY- 128
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
AA + I + T + AIE+N SCP HG G +GQD L EV +
Sbjct: 129 -AAVSQGISKA--TNVKAIELNISCPNVDHG----NHGLLIGQDPDLAYEVVKAAVEASD 181
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VPV+ K+TP++TD+ A+ A +G+ G++ INT++ M DLKT +P + T GG
Sbjct: 182 VPVYVKLTPSVTDVVTIAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GG 236
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 237 MSGPAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTA 289
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 290 NFTNPYA-CPDIIENLPKVMDKYGISSLENLR 320
>gi|406576412|ref|ZP_11052041.1| dihydroorotate dehydrogenase 1B [Streptococcus sp. GMD6S]
gi|406586404|ref|ZP_11061335.1| dihydroorotate dehydrogenase 1B [Streptococcus sp. GMD1S]
gi|419813625|ref|ZP_14338438.1| dihydroorotate dehydrogenase 1B [Streptococcus sp. GMD2S]
gi|419816988|ref|ZP_14341159.1| dihydroorotate dehydrogenase 1B [Streptococcus sp. GMD4S]
gi|404461419|gb|EKA07350.1| dihydroorotate dehydrogenase 1B [Streptococcus sp. GMD6S]
gi|404466529|gb|EKA11861.1| dihydroorotate dehydrogenase 1B [Streptococcus sp. GMD4S]
gi|404472736|gb|EKA17151.1| dihydroorotate dehydrogenase 1B [Streptococcus sp. GMD2S]
gi|404474084|gb|EKA18404.1| dihydroorotate dehydrogenase 1B [Streptococcus sp. GMD1S]
Length = 312
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 159/332 (47%), Gaps = 41/332 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N L E +L E L+ YP +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQNPGL------EAVLAEKLPWLEREYPSLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
AA + I + T + AIE+N SCP HG G +GQD L EV +
Sbjct: 113 -AAVSQGISKA--TNVKAIELNISCPNVDHG----NHGLLIGQDPDLAYEVVKAAVEASD 165
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VPV+ K+TP++TD+ A+ A +G+ G++ INT++ M DLKT +P + T GG
Sbjct: 166 VPVYVKLTPSVTDVVTIAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GG 220
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 221 MSGPAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTA 273
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 274 NFTNPYA-CPDIIENLPKVMDKYGISSLENLR 304
>gi|418977641|ref|ZP_13525455.1| dihydroorotate dehydrogenase 1B [Streptococcus mitis SK575]
gi|383349609|gb|EID27538.1| dihydroorotate dehydrogenase 1B [Streptococcus mitis SK575]
Length = 312
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T I AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSSGISKA--TNIKAIELNISCPN-VDHCNHGLLIGQDSDLAYDVVKAAVEASDVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVSPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLENLR 304
>gi|419780314|ref|ZP_14306164.1| dihydroorotate oxidase, catalytic subunit [Streptococcus oralis
SK100]
gi|383185473|gb|EIC77969.1| dihydroorotate oxidase, catalytic subunit [Streptococcus oralis
SK100]
Length = 312
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 158/332 (47%), Gaps = 41/332 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEAVLAEKLPWLEREYPTLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
AA + I + + AIE+N SCP HG G +GQD L EV +
Sbjct: 113 -AAVSQGISKA--ANVKAIELNISCPNVDHG----NHGLLIGQDPDLAYEVVKAAVEASD 165
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VPV+ K+TP++TD+ A+ A +G+ G++ INT++ M DLKT +P + T GG
Sbjct: 166 VPVYVKLTPSVTDVVTIAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GG 220
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 221 MSGPAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTA 273
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+ED R
Sbjct: 274 NFTNPYA-CPDIIEHLPKVMDKYGISSLEDLR 304
>gi|417885160|ref|ZP_12529317.1| dihydroorotate dehydrogenase 1B [Lactobacillus oris F0423]
gi|341596141|gb|EGS38761.1| dihydroorotate dehydrogenase 1B [Lactobacillus oris F0423]
Length = 308
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 158/326 (48%), Gaps = 32/326 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L++ + GL + NP + SG G V K G++V K+ +L A + N PR
Sbjct: 7 LAVDLPGLALKNPIIPASGTCGYGQQVAKNYDLNLLGSLVLKSTTLHA-RAGNPQPRVCE 65
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIMEEYNKAAW 165
AG W N + + ++ +++E L YPD +IAS ++ A +
Sbjct: 66 TSAG-----------WLNANGLQNVGVDAVVREKLPWLHRYYPDLPVIAS-AAGFSTAEY 113
Query: 166 EELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT-VPVWA 223
E +++++ + AIE+N SCP+ + G A+G D +LE++ + +A P++
Sbjct: 114 ETVVEQLAAAPTVSAIELNVSCPN---VKHGGLAMGTDPAVLEDLTRKVVRRAKGKPIYV 170
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K+TPN+TDI A+ A R G+ G++ +NT+ + I+L+T RP + GG S A
Sbjct: 171 KLTPNVTDIVPLAQAAERGGANGLTMVNTLTG-LSINLRTRRPVLA----NVTGGLSGPA 225
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ P+AL +M+ + + G+GG+E+ D EF++ GAN V+V H
Sbjct: 226 LKPMAL-------RMIHQVRSVSSLPIIGVGGIESAEDVLEFMMAGANAVEV-GAASFHD 277
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDF 369
R+ +L M + + + D
Sbjct: 278 PLACPRIAADLPLVMDRYGINKLTDL 303
>gi|401683452|ref|ZP_10815338.1| dihydroorotate oxidase [Streptococcus sp. BS35b]
gi|418974723|ref|ZP_13522632.1| dihydroorotate dehydrogenase 1B [Streptococcus oralis SK1074]
gi|383348094|gb|EID26053.1| dihydroorotate dehydrogenase 1B [Streptococcus oralis SK1074]
gi|400187530|gb|EJO21724.1| dihydroorotate oxidase [Streptococcus sp. BS35b]
Length = 312
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 158/332 (47%), Gaps = 41/332 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N L E +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQNPGL------EAVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
AA I + + AIE+N SCP HG G +GQD L EV +
Sbjct: 113 -AAVSRGISKA--ANVKAIELNISCPNVDHG----NHGLLIGQDPDLAYEVVKAAVEASD 165
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VPV+ K+TP++TD+ A+ A +G+ G++ INT++ M DLKT +P + T GG
Sbjct: 166 VPVYVKLTPSVTDVVTIAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GG 220
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 221 MSGPAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTA 273
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+ED R
Sbjct: 274 NFTNPYA-CPDIIEHLPKVMDKYGISSLEDLR 304
>gi|161485673|ref|NP_633769.2| dihydroorotate dehydrogenase 1B [Methanosarcina mazei Go1]
Length = 301
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 154/327 (47%), Gaps = 31/327 (9%)
Query: 50 TVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGW-GAVVAKTVSLDAAKVINVTPRYARLR 108
T+ GL++ NP ++ +G GT + R EG GAVV K++ A K + P L
Sbjct: 3 TLTGLKLKNPTILAAGVLGTTGASLCRVAREGGAGAVVTKSIG-PAPKTGHPNPSMIELD 61
Query: 109 AGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEEL 168
G + N + + L+E + K D +IASI + + E+
Sbjct: 62 CG-----------FLNAMGLPNPSYPGFLQELEFAKE-NSDAPVIASIFGG-TPSEFAEV 108
Query: 169 IDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPN 228
+ + DA E+N SCPH GAA+G + L+E V + VPVW K+TPN
Sbjct: 109 AEGLLPAKPDAFELNVSCPH---AEGYGAAIGSNPCLVEAVTAAVKDVVNVPVWVKLTPN 165
Query: 229 ITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIA 288
+ DIT A G++ V AINT+ M ID+++ P V G + GG S KAV P+A
Sbjct: 166 VADITCIGNAAESGGADAVVAINTVKG-MAIDIESGYP---VLGNRS-GGLSGKAVKPVA 220
Query: 289 LGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVK 348
+ K + F + + G+GGV + DA E I+ GA VQV + V G+
Sbjct: 221 V-------KCVYDLFTALEIPVIGVGGVSSWEDAVEMIMAGAAAVQVGSAVYDR-VGIFS 272
Query: 349 RLCEELKDFMKMHNFSSIEDFRGASIE 375
+ + ++ F+K +S I+ G + E
Sbjct: 273 EIGKGIEAFLKRKGYSDIKKITGLAHE 299
>gi|295693236|ref|YP_003601846.1| dihydroorotate dehydrogenase [Lactobacillus crispatus ST1]
gi|295031342|emb|CBL50821.1| Dihydroorotate dehydrogenase [Lactobacillus crispatus ST1]
Length = 307
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 156/293 (53%), Gaps = 33/293 (11%)
Query: 49 ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARL 107
+ + GL + NP + SG G + FD GA+V KT + A N P+ A L
Sbjct: 6 VKLPGLDLKNPVMPASGTFGFGDVPAAKKFDLNDLGAMVIKTTT-PHATTGNPQPQIAVL 64
Query: 108 RAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
G S +G N ++ + LE + K+ YP+ ++AS+ + ++A +
Sbjct: 65 DDGVLNS-----VGLTNPGVDKVISEKLEPLRKQ-------YPELPIVASVGGD-SEADY 111
Query: 166 EELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
E+ ++ +G ++A+E+N SCP+ + G + G ++EE+ I A +P++ K
Sbjct: 112 VEVAQKLSNSGLVNALEINVSCPN---VAQGGMSFGVHADVVEELTRKIKAVVNIPIYVK 168
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN+TDIT A+ A + G++G+S INT++ M ID+K RP + G++ GG S +AV
Sbjct: 169 LTPNVTDITVIAKAAEKGGADGLSMINTLLG-MRIDVKKRRP---LLGHNM-GGLSGEAV 223
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
PIA+ +++S + + S + G+GG+ + D EF+L GAN + V T
Sbjct: 224 KPIAI-RMISQVRQITS------LPIIGMGGIASAEDVVEFMLAGANAIAVGT 269
>gi|365174420|ref|ZP_09361868.1| dihydroorotate dehydrogenase [Synergistes sp. 3_1_syn1]
gi|363614976|gb|EHL66448.1| dihydroorotate dehydrogenase [Synergistes sp. 3_1_syn1]
Length = 406
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 159/373 (42%), Gaps = 40/373 (10%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
+P+L++ G++ NP VI S P N M+R + G G V+AKT S + V+PR
Sbjct: 2 KPNLTVEYCGVKFKNPMVIASASPSKNGEYMRRCAESGAGGVIAKTYSPEPLAQKYVSPR 61
Query: 104 YARLRAGANGSAKGQIIGWEN------IELISDRPLETMLKEFKQLKALYPDK--ILIAS 155
+ L GW N E ++ E + E K ++ L+ S
Sbjct: 62 FTVLHKK----------GWPNNYSNYSCEFLATYNTEEWMNEMAIAKKECDERNCTLVGS 111
Query: 156 IMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPE---RKMGAAVGQDCRLLEEVCGW 212
I +K +W EL R+E+ G+ +E+NF CPH P+ K G +G EV
Sbjct: 112 ISGN-SKESWIELAKRMEDLGLPMLELNFGCPH--PKDLGYKSGQELGNSPEAAAEVTRI 168
Query: 213 INAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG 272
+ +PV+ K+T I + A +G+ G + +N S + +D++T RP G
Sbjct: 169 VCDAVKIPVFVKLTSEAVSIVDVAGRCKEAGAAGFTVVNR-FSALDVDIETGRPL-LHGG 226
Query: 273 YSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANT 332
Y+ GG + PI L + IA +S G+ + D + I+ GA T
Sbjct: 227 YAGVGG---PWMRPITLKWIAKIAAAT-------GMPISATNGIFSWEDVIKCIMCGATT 276
Query: 333 VQVCTGVMM--HGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQ-- 388
VQ CT +M + V ++ ++ HN I RG ++ T ++ R
Sbjct: 277 VQTCTAIMYGPKQFAEVGNFLAGVEKYLADHNIDDINKLRGITLPQIITWDKVDREHTAI 336
Query: 389 EAIQQRKAVRKGL 401
+ Q K V GL
Sbjct: 337 SKVCQDKCVGCGL 349
>gi|225570767|ref|ZP_03779790.1| hypothetical protein CLOHYLEM_06870 [Clostridium hylemonae DSM
15053]
gi|225160229|gb|EEG72848.1| hypothetical protein CLOHYLEM_06870 [Clostridium hylemonae DSM
15053]
Length = 300
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 34/328 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D + + G+++ NP + SG G+ + GAVV K V+ + N PR A
Sbjct: 2 DTKVNLAGVELKNPVMTASGTFGSGEEYSEFVDLGRLGAVVTKGVA-NIPWPGNPVPRIA 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+G + IG +N I+L R + LK+F D +I ++ +
Sbjct: 61 ETASGMMNA-----IGLQNPGIDLFCRRDIP-FLKQF--------DTKIIVNVCGRTTED 106
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E+++R+ E +D +E+N SCP+ ++ G A GQ+ + +EE+ + +A PV
Sbjct: 107 -YCEVVERLAEEDVDMLEINISCPN---VKEGGIAFGQNPKAVEEITAEVKKRAKQPVIM 162
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+TDITE AR A G++ +S INT+ M ID+ + GG S A
Sbjct: 163 KLSPNVTDITETARAAEAGGADVLSLINTLTG-MKIDIH----RRTFALANKTGGLSGPA 217
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
V P+A+ +M+ N + G+GG+ T DA EF+L GA+ V V T
Sbjct: 218 VKPVAV-------RMVYQAANAVKLPIIGMGGIATAEDAIEFLLAGASAVSVGTANFYDP 270
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
V R+ E ++ +MK + F + + G
Sbjct: 271 SATV-RVAEGIEAYMKRYGFEHVSELTG 297
>gi|189485746|ref|YP_001956687.1| dihydroorotate dehydrogenase catalytic subunit [uncultured Termite
group 1 bacterium phylotype Rs-D17]
gi|229485593|sp|B1GYY3.1|PYRDB_UNCTG RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|170287705|dbj|BAG14226.1| dihydroorotate dehydrogenase catalytic subunit [uncultured Termite
group 1 bacterium phylotype Rs-D17]
Length = 306
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 164/332 (49%), Gaps = 41/332 (12%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
PDLS+ G+++ NP + SG G Y + + G VV KTV+L+ + N+ PR
Sbjct: 3 PDLSVNFAGIKLKNPVLTASGTFGYGYELADLIPLKRLGGVVTKTVTLEP-RAGNLQPRI 61
Query: 105 ARLRAGANGSAKGQIIGWENIEL--ISDRPLETMLKEFKQLKALYPDKILIASIMEEYNK 162
A + +G S IG +NI + + PLE + +KI + I+
Sbjct: 62 AEVASGILNS-----IGLQNIGVRAFIEEPLEKL------------NKIGVPVIVSVAGV 104
Query: 163 AAWE--ELIDRVE-ETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219
A E E++ + + G+ AIE+N SCP+ ++K+ V D L+ +V + + V
Sbjct: 105 AVGEYVEIVKILSSQNGVSAIELNLSCPN--LKKKI---VCHDLPLMRDVIRGVKKVSRV 159
Query: 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279
PV AK++P +TDI+E A A +G++GV+ NT M +D++T +P+ + GG
Sbjct: 160 PVIAKLSPLVTDISELALTAQNAGADGVTLTNT-YPAMAVDIRTFKPKLS----TVKGGM 214
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S + P+++ + + + D + G GG+ G DA EFIL GA V V +
Sbjct: 215 SGACIKPMSV-------RCVYDAYQDIKIPIIGCGGIMMGEDAVEFILAGATAVSVGSSS 267
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
++ L+ + + ++D +K N S++ G
Sbjct: 268 LVSPGNLIA-IIDGIEDILKEKNIKSVKKIIG 298
>gi|417937597|ref|ZP_12580897.1| dihydroorotate dehydrogenase 1B [Streptococcus infantis SK970]
gi|343391861|gb|EGV04434.1| dihydroorotate dehydrogenase 1B [Streptococcus infantis SK970]
Length = 311
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 160/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL++ NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLELKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIMEEYNKAAW 165
AG + IG +N L+ +L E L+ YP+ +IA++ ++K +
Sbjct: 65 TPAGMLNA-----IGLQN------PGLDVVLSEKLPWLEREYPNLPIIANV-AGFSKQEY 112
Query: 166 EELIDRVEE-TGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
+ V + T + AIE+N SCP HG G +GQD L +V ++VPV
Sbjct: 113 AAVSHGVSKATNVKAIELNISCPNVDHG----NHGLLIGQDPELAYDVVKAAVEASSVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDIT A+ A +G+ G++ INT++ M D+KT +P + T GG S
Sbjct: 169 YVKLTPSVTDITSVAKAAEDAGASGLTMINTLVG-MRFDIKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTSLPIIGMGGVDSAQAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M +N S+E R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYNIESLEQLR 304
>gi|227878925|ref|ZP_03996828.1| dihydroorotate dehydrogenase 1B [Lactobacillus crispatus JV-V01]
gi|256843503|ref|ZP_05548991.1| dihydroorotate dehydrogenase B [Lactobacillus crispatus 125-2-CHN]
gi|256849737|ref|ZP_05555168.1| dihydroorotate dehydrogenase B [Lactobacillus crispatus MV-1A-US]
gi|262046689|ref|ZP_06019650.1| dihydroorotate dehydrogenase B [Lactobacillus crispatus MV-3A-US]
gi|293380101|ref|ZP_06626190.1| dihydroorotate dehydrogenase 1B [Lactobacillus crispatus 214-1]
gi|227861471|gb|EEJ69087.1| dihydroorotate dehydrogenase 1B [Lactobacillus crispatus JV-V01]
gi|256614923|gb|EEU20124.1| dihydroorotate dehydrogenase B [Lactobacillus crispatus 125-2-CHN]
gi|256713226|gb|EEU28216.1| dihydroorotate dehydrogenase B [Lactobacillus crispatus MV-1A-US]
gi|260573138|gb|EEX29697.1| dihydroorotate dehydrogenase B [Lactobacillus crispatus MV-3A-US]
gi|290923314|gb|EFE00228.1| dihydroorotate dehydrogenase 1B [Lactobacillus crispatus 214-1]
Length = 307
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 157/290 (54%), Gaps = 35/290 (12%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGA 111
GL + NP + SG G + FD GA+V KT + A N P+ A L G
Sbjct: 10 GLDLKNPVMPASGTFGFGDVPAAKKFDLNDLGAMVIKTTT-PHATTGNPQPQIAVLDDGV 68
Query: 112 NGSAKGQIIGWENI---ELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEEL 168
S +G N ++IS++ LE + K+ YP+ ++AS+ + ++A + E+
Sbjct: 69 LNS-----VGLTNPGVNKVISEK-LEPLRKQ-------YPELPIVASVGGD-SEADYVEV 114
Query: 169 IDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTP 227
++ +G ++A+E+N SCP+ + G + G ++EE+ I A +P++ K+TP
Sbjct: 115 AQKLSNSGLVNALEINVSCPN---VAQGGMSFGVHADVVEELTRKIKAVVNIPIYVKLTP 171
Query: 228 NITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPI 287
N+TDIT A+ A + G++G+S INT++ M ID+K RP + G++ GG S +AV PI
Sbjct: 172 NVTDITVIAKAAEKGGADGLSMINTLLG-MRIDVKKRRP---LLGHNM-GGLSGEAVKPI 226
Query: 288 ALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
A+ +++S + + S + G+GG+ + D EF+L GAN V V T
Sbjct: 227 AI-RMISQVRQITS------LPIIGMGGIASAEDVVEFMLAGANAVAVGT 269
>gi|390947515|ref|YP_006411275.1| dihydroorotate dehydrogenase family protein [Alistipes finegoldii
DSM 17242]
gi|390424084|gb|AFL78590.1| dihydroorotate dehydrogenase family protein [Alistipes finegoldii
DSM 17242]
Length = 319
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 156/335 (46%), Gaps = 44/335 (13%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAA----KVINV 100
PD+S+T++GL++ NP V SG G F + + + + S + N
Sbjct: 18 PDMSVTLSGLKLDNPVVPASGTFGYG-----NEFRDFYDINILGSFSFKGTTREPRFGNP 72
Query: 101 TPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI---- 156
TPR A AG + Q G + + + +E +LK+ + K +IA+I
Sbjct: 73 TPRIAECTAGMINAVGLQNPGIDAV----------IAEELPRLKSFF-HKPVIANISGFS 121
Query: 157 MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK 216
+EEY A E IDR E+ GI IEVN SCP+ R G + G EV + A
Sbjct: 122 IEEY--AYCCERIDREEQVGI--IEVNVSCPN---VRHGGMSFGTSPECAAEVTRAVKAV 174
Query: 217 ATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTP 276
T PV+ K++PN+TDI AR +G++G+ INT++ M ID++ + +T
Sbjct: 175 TTKPVYIKLSPNVTDIVSIARACEEAGADGICLINTLLG-MRIDVRCRK----AVIANTM 229
Query: 277 GGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336
GG+S AV P+A+ V +AK + G GGV T D E ++ GA VQV
Sbjct: 230 GGFSGAAVFPVAVRMVYQVAKAC-------SVPVMGCGGVTTARDVIEMMMAGATAVQVG 282
Query: 337 TGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+++ Y K + E L M+ + D G
Sbjct: 283 AANLVNPYA-SKEIVEALPAEMERLGIERLSDIIG 316
>gi|306825429|ref|ZP_07458769.1| dihydroorotate dehydrogenase B [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304432367|gb|EFM35343.1| dihydroorotate dehydrogenase B [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 319
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 158/332 (47%), Gaps = 41/332 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 13 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 71
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP +IA++ +EY
Sbjct: 72 TPAGMLNA-----IGLQN------PGLEAVLAEKLPWLEREYPTLPIIANVAGFSKQEY- 119
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
AA + I + + AIE+N SCP HG G +GQD L EV +
Sbjct: 120 -AAVSQGISKA--ANVKAIELNISCPNVDHG----NHGLLIGQDPDLAYEVVKAAVEASD 172
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VPV+ K+TP++TD+ A+ A +G+ G++ INT++ M DLKT +P + T GG
Sbjct: 173 VPVYVKLTPSVTDVVTIAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GG 227
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 228 MSGPAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTA 280
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+ED R
Sbjct: 281 NFTNPYA-CPDIIENLPKVMDKYGISSLEDLR 311
>gi|268319399|ref|YP_003293055.1| hypothetical protein FI9785_918 [Lactobacillus johnsonii FI9785]
gi|262397774|emb|CAX66788.1| pyrD [Lactobacillus johnsonii FI9785]
Length = 307
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 151/288 (52%), Gaps = 31/288 (10%)
Query: 53 GLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGA 111
GL + NP + SG G + FD GA+V KT + + N P+ A L G
Sbjct: 10 GLDLKNPIMPASGTFGFGDVPAAKKFDLNDLGAMVIKTTT-PHSTTGNPQPQIAVLNTGV 68
Query: 112 NGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIMEEYNKAAWEELID 170
S +G N ++ ++K+ L+ YP ++AS+ E ++A + E+
Sbjct: 69 LNS-----VGLTN------PGVDAVIKDKLTPLRNEYPALPIMASVGGE-DEAGYLEVAK 116
Query: 171 RVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNI 229
++ ++G ++A+E+N SCP+ + G + G ++EE+ I + +P++ K+TPN+
Sbjct: 117 KLSDSGLVNALEINVSCPN---VNQGGMSFGVYPDVVEELTKKIKSVVKIPIYVKLTPNV 173
Query: 230 TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL 289
TDIT+ A+ A G++G+S INT++ M ID++T +P V G++ GG S +AV PIA+
Sbjct: 174 TDITQIAKAAENGGADGLSLINTLLG-MEIDVETRKP---VLGHNI-GGLSGEAVKPIAI 228
Query: 290 GKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
+M+ + G+GG+ + D EFIL GAN V V T
Sbjct: 229 -------RMVHQVRESTTLPIIGMGGISSAKDVIEFILAGANAVAVGT 269
>gi|242279625|ref|YP_002991754.1| dihydroorotate dehydrogenase family protein [Desulfovibrio
salexigens DSM 2638]
gi|259547492|sp|C6BW12.1|PYRDB_DESAD RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|242122519|gb|ACS80215.1| dihydroorotate dehydrogenase family protein [Desulfovibrio
salexigens DSM 2638]
Length = 305
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 155/328 (47%), Gaps = 30/328 (9%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+SI GL++ NP + SG G + E G +V K +SL + N PR A
Sbjct: 2 DVSIDFAGLKLKNPILTASGTFGFGLEFQRYGDLESLGGIVVKGLSLKPREG-NPMPRIA 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
G + Q G E E I+ + + K L LY A+ EE+ + A
Sbjct: 61 ETPCGMLNAIGIQNPGVE--EFINKKLPKLPWKTLPVLANLY------ATDAEEFGELAG 112
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAK 224
E G+ A+EVN SCP+ ++ G A GQD + + +V + A P+ K
Sbjct: 113 V----LAGEEGVAALEVNVSCPN---VKEGGIAFGQDPKQITKVAEAVKKNAGNKPIIIK 165
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
++PN+TDIT A+ A G++ +S INT +S M +D++ P + GG S AV
Sbjct: 166 LSPNVTDITVCAKAAEDGGADALSLINT-LSGMAVDIERRTPRLA----NVIGGLSGPAV 220
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
P+AL V +K + G+GG+ T DAAEF+L+GA VQ+ TG +
Sbjct: 221 KPVALRCVYQTVNAVK-------IPVMGLGGITTAEDAAEFLLVGAKAVQIGTGNFLS-P 272
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGA 372
R+ EEL ++ S+++F G+
Sbjct: 273 DTAFRIAEELPKVLERVKAESLDEFIGS 300
>gi|429317775|emb|CCP37577.1| dihydroorotate dehydrogenase, catalytic subunit [Streptococcus
pneumoniae SPN034156]
Length = 312
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIISASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T I AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKA--TNIKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLEELR 304
>gi|377809240|ref|YP_005004461.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Pediococcus claussenii ATCC BAA-344]
gi|361055981|gb|AEV94785.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Pediococcus claussenii ATCC BAA-344]
Length = 304
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 157/333 (47%), Gaps = 43/333 (12%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+L + + G+ + NPF+ SG ++ K+ + GA+V K+ +L+ K + P
Sbjct: 3 NLEVNIAGVNLKNPFMPASGTAAYGQSLAKQINLDDLGALVIKSTTLNK-KTGHPEPTTV 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASI----MEEY 160
+ AG W N + + +E + KE L YP+ +I S+ EEY
Sbjct: 62 QTSAG-----------WLNAVGLKNPGIEEVEKEQLPWLAENYPNLPVIGSVAGDTTEEY 110
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+ A + +D + I +E+N SCP+ G G + ++EE+ I T P
Sbjct: 111 IEVA--KRMDNI--ANISILEINISCPN---VANGGIEFGVEPSVVEELTRRIKDVTTKP 163
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
V+ K+ P +T I E A A R G +G++ INTIM M IDL T +P + GG S
Sbjct: 164 VFMKLGPGVTSIVEIAAAAERGGCDGLTMINTIMG-MEIDLNTRKPHLS----NGTGGLS 218
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
+A+HPIA+ + + + K + G+GG+ T DA E +L GAN VQV +
Sbjct: 219 GRAIHPIAVRMIYQVRQQTK-------LPIIGVGGIFTAEDALELMLAGANAVQVGSAR- 270
Query: 341 MHGYG---LVKRLCEELKDFMKMHNFSSIEDFR 370
YG +++ L E MK ++ I D +
Sbjct: 271 ---YGNPRVIEELIETFPSKMKEYHLGDINDIK 300
>gi|148984706|ref|ZP_01817974.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae SP3-BS71]
gi|387757351|ref|YP_006064330.1| dihydroorotate dehydrogenase, catalytic subunit [Streptococcus
pneumoniae OXC141]
gi|418232033|ref|ZP_12858620.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA07228]
gi|418236472|ref|ZP_12863040.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA19690]
gi|147923097|gb|EDK74212.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae SP3-BS71]
gi|301799940|emb|CBW32523.1| dihydroorotate dehydrogenase, catalytic subunit [Streptococcus
pneumoniae OXC141]
gi|353886760|gb|EHE66540.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA07228]
gi|353892704|gb|EHE72452.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA19690]
gi|429319319|emb|CCP32574.1| dihydroorotate dehydrogenase, catalytic subunit [Streptococcus
pneumoniae SPN034183]
gi|429321135|emb|CCP34548.1| dihydroorotate dehydrogenase, catalytic subunit [Streptococcus
pneumoniae SPN994039]
gi|429322955|emb|CCP30589.1| dihydroorotate dehydrogenase, catalytic subunit [Streptococcus
pneumoniae SPN994038]
Length = 312
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T I AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKA--TNIKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLEELR 304
>gi|268608526|ref|ZP_06142253.1| dihydroorotate dehydrogenase 1B [Ruminococcus flavefaciens FD-1]
Length = 303
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 160/331 (48%), Gaps = 40/331 (12%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGW-----GAVVAKTVSLDAAKVINV 100
DLS+ V G+ NP + SG G R ++E + G + K +L + N+
Sbjct: 3 DLSVNVCGIDFKNPIIPASGVFGYG-----REYEELFPLSKLGGIATKGTTLHL-RTGNL 56
Query: 101 TPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
PR A +G S +G +N + D ++T L L D +++A+I
Sbjct: 57 APRIAETPSGMLNS-----VGLQNPGI--DHFIDTELPNL-----LTKDLVILANIAGAT 104
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+ E+ ++++T + IE+N SCP+ ++ GAA G C + EV + P
Sbjct: 105 PEEC-AEVAAKLDDTDVHMIELNISCPN---VKQGGAAFGTSCDMAAEVTRKVREATKKP 160
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
+ K++PN+T IT+ A+ +G++ VS INT++ M ID+ T RP + GG S
Sbjct: 161 LVVKLSPNVTSITDIAKSVEAAGADAVSLINTLLG-MRIDINTGRPIL----RNNVGGMS 215
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
AV PIA+ V +A N + + G+GGV +G DA E ++ GA+ VQV +
Sbjct: 216 GPAVFPIAVRMVWQVA-------NAVNIPVIGMGGVSSGRDAIELMMAGASAVQVGAAIF 268
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
Y VK + +E+ +F+ S++D G
Sbjct: 269 TDPYAPVK-IIDEMNEFLDSKGIKSVKDIIG 298
>gi|257791414|ref|YP_003182020.1| dihydroorotate dehydrogenase family protein [Eggerthella lenta DSM
2243]
gi|257475311|gb|ACV55631.1| dihydroorotate dehydrogenase family protein [Eggerthella lenta DSM
2243]
Length = 356
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 151/327 (46%), Gaps = 30/327 (9%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+ + + GL+M NP + SG G GAV K VSL+ N +PR A
Sbjct: 57 DMRVNLGGLEMKNPVTVASGTFAAGREYGDFVDVAGLGAVTTKGVSLNG-WAGNASPRIA 115
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+G S IG +N P LKE L L + + ++ +
Sbjct: 116 ETPSGMLNS-----IGLQN-------PGVAHLKEC-DLPWLAERGATVIVNVSGHSFDEY 162
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
++I+ +E+ +DA EVN SCP+ G +G +E V A P+ K+
Sbjct: 163 VQVIEALEDVPVDAYEVNISCPN---VDAGGMTIGTCTDSVEAVVSRCRAATKRPLIVKL 219
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+TD+TE AR A+ +G++ +S INT++ M ID + RP+ G GG S AV
Sbjct: 220 TPNVTDVTEIARAAVSAGADALSLINTLLG-MAIDAERRRPQ-LARGV---GGLSGPAVK 274
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
P+AL V + + + D L G+GG+ DA EF+L GA V V T ++ +
Sbjct: 275 PVALRMVWEVHQAV-------DVPLLGMGGISCATDAVEFMLAGATAVAVGTANFVNPHA 327
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGA 372
V+ + + + + + H ++ GA
Sbjct: 328 TVE-IIDGMAQYCERHGIEDVQQLIGA 353
>gi|160880418|ref|YP_001559386.1| dihydroorotate dehydrogenase 1B [Clostridium phytofermentans ISDg]
gi|229485557|sp|A9KKR5.1|PYRDB_CLOPH RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|160429084|gb|ABX42647.1| dihydroorotate dehydrogenase family protein [Clostridium
phytofermentans ISDg]
Length = 300
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 157/328 (47%), Gaps = 34/328 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+ ++T+ G+ NP SG G+ + GA+ K VS N PR A
Sbjct: 2 NTNVTIAGVTFKNPVTTASGTFGSGMEYSEFVDLNRLGAITTKGVS-SVPWPGNPVPRIA 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
G + IG +N +++ +R L LK+F D +I ++ + K
Sbjct: 61 ETYGGMLNA-----IGLQNPGVDMFVERDL-AFLKQF--------DTKVIVNVCGKSVKE 106
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E+++R+ E +D +E+N SCP+ ++ A GQD +++ + I A PV
Sbjct: 107 -YVEVVERLSEEAVDLLELNISCPN---VKEGCIAFGQDPKMIAMIMDEIKRHAKQPVIV 162
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+TDITE A+ A G++ +S INT+ M ID+ + GG S A
Sbjct: 163 KLSPNVTDITEMAKAAEAGGADALSLINTLTG-MKIDIN----HRAFAIANKTGGMSGPA 217
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
V PIA+ V +A +K + G+GG++ DA EFI+ GA V V T ++
Sbjct: 218 VKPIAVRMVYQVANAVK-------LPIIGMGGIQNAEDALEFIMAGATVVAVGTANFINP 270
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
Y V+ + E +++FM+ + S I D G
Sbjct: 271 YATVE-VIEGIEEFMRKNQISDINDLIG 297
>gi|435853654|ref|YP_007314973.1| dihydroorotate dehydrogenase family protein [Halobacteroides
halobius DSM 5150]
gi|433670065|gb|AGB40880.1| dihydroorotate dehydrogenase family protein [Halobacteroides
halobius DSM 5150]
Length = 308
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 163/332 (49%), Gaps = 36/332 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+L++ +NGL++ NP SG G + G V+ K +L K N TPR A
Sbjct: 5 NLAVDLNGLKLQNPVTTASGTFGFGEEYQDYLDLDSLGGVMVKGTTLHP-KQGNPTPRIA 63
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILI---ASIMEEYNK 162
+AG + IG +N ++ ++KE Y K ++ + +++Y K
Sbjct: 64 ETKAGMLNA-----IGLQN------PGVDYLIKEILPTIKDYDFKTIVNISGNTVKDYAK 112
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
L ++ + G+ A+EVN SCP+ ++ G A G + V + A+ +P+
Sbjct: 113 -----LASKLNQAGVAALEVNISCPN---VKQGGLAFGTQPEMAAGVVEAVRAETDLPLI 164
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
K++PN+ DITE AR +G++ +S INT++ M ID+ + +P + GG S
Sbjct: 165 TKLSPNVADITEIARAVEEAGTDVISLINTLLG-MKIDIDSQKPILA----NQMGGLSGP 219
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ P+A+ V +A+ + D L G+GG+ DA EF+L GA+ + + T ++
Sbjct: 220 AIKPVAVRMVYQVAQAV-------DVPLIGMGGISNAQDAIEFLLAGADAISIGTANFVN 272
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+ + E L+D++ +++ ++ + G +I
Sbjct: 273 PQ-VSMEVLEGLEDYLVENDYDNVSEIVGNAI 303
>gi|423318363|ref|ZP_17296240.1| dihydroorotate dehydrogenase [Lactobacillus crispatus FB049-03]
gi|423322062|ref|ZP_17299933.1| dihydroorotate dehydrogenase [Lactobacillus crispatus FB077-07]
gi|405591516|gb|EKB65018.1| dihydroorotate dehydrogenase [Lactobacillus crispatus FB077-07]
gi|405596087|gb|EKB69444.1| dihydroorotate dehydrogenase [Lactobacillus crispatus FB049-03]
Length = 307
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 155/293 (52%), Gaps = 33/293 (11%)
Query: 49 ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARL 107
+ + GL + NP + SG G + FD GA+V KT + A N P+ L
Sbjct: 6 VKLPGLDLKNPVMPASGTFGFGDVPAAKKFDLNDLGAMVIKTTT-PHATTGNPQPQIDVL 64
Query: 108 RAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
G S +G N +E + LE + K+ YP+ ++AS+ + ++A +
Sbjct: 65 DDGVLNS-----VGLTNPGVEKVISEKLEPLRKQ-------YPELPIVASVGGD-SEADY 111
Query: 166 EELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
E+ ++ +G ++A+E+N SCP+ + G + G ++EE+ I A +P++ K
Sbjct: 112 VEVAQKLSNSGLVNALEINVSCPN---VAQGGMSFGVHADVVEELTRKIKAVVNIPIYVK 168
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN+TDIT A+ A + G++G+S INT++ M ID+K RP + G++ GG S +AV
Sbjct: 169 LTPNVTDITVIAKAAEKGGADGLSMINTLLG-MRIDVKKRRP---LLGHNM-GGLSGEAV 223
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
PIA+ +++S + + S + G+GG+ + D EF+L GAN V V T
Sbjct: 224 KPIAI-RMISQVRQITS------LPIIGMGGIASAEDVVEFMLAGANAVAVGT 269
>gi|212224413|ref|YP_002307649.1| dihydroorotate dehydrogenase 1B [Thermococcus onnurineus NA1]
gi|212009370|gb|ACJ16752.1| dihydroorotate dehydrogenase [Thermococcus onnurineus NA1]
Length = 300
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 157/333 (47%), Gaps = 40/333 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + V GL++ NP ++ SG RA +EG G VV K++ ++ + P
Sbjct: 4 LFVEVAGLKLENPLILASGVNDKTPEQWIRAHEEGAGGVVTKSIGIEPRNGYD-NPTIVE 62
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM----EEYNK 162
L G + GW+ + ++ D LI SI EE+
Sbjct: 63 LPYGLINAMGLPNPGWKGF--------------LEMVEGYTFDFPLIVSIFGGTPEEF-- 106
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
L +++ E +A E+N SCPH + G +GQ ++ EV + PV
Sbjct: 107 ---AFLAEKLSEVA-NAFELNLSCPHA---KGYGMEIGQRPEMVYEVVKAVKDVTDKPVI 159
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
AK+TPNI DIT+ A ++G++ V+AINT+ ++ ID+ RP + GGYS
Sbjct: 160 AKLTPNIDDITKLGLAAEKAGADAVAAINTLKAI-AIDVYARRPILS----NRVGGYSGP 214
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
V P+AL V +AK + + + GIGG+ T DA EF L GA +Q+ T V +
Sbjct: 215 GVKPVALRAVYDLAKAL-------NIPVIGIGGITTWRDALEFFLAGARALQIGTAVALR 267
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
G+ + + + E + +++ F SIE+ G ++E
Sbjct: 268 GWKVFREINEGIARYLEEEGFESIEEIVGLALE 300
>gi|327401692|ref|YP_004342531.1| dihydroorotate dehydrogenase [Archaeoglobus veneficus SNP6]
gi|327317200|gb|AEA47816.1| dihydroorotate dehydrogenase family protein [Archaeoglobus
veneficus SNP6]
Length = 313
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 150/324 (46%), Gaps = 39/324 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + + GL+M NP ++ SG G++ + + R GAVVAK+V + PR
Sbjct: 18 LEVELCGLKMKNPLMLASGIMGSHVSSLIR-ISRHAGAVVAKSVGTE--------PREGY 68
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKI---LIASIMEEYNKA 163
A G I N +S + +E ++ +A + L AS EE+
Sbjct: 69 RNPVVVNYAHGLI----NAVGLSSPGVRAFAEELEKFRAEGRSPLVVSLFASTSEEFASL 124
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ DA E+N SCPH +G AVG D L++E+ + PV+A
Sbjct: 125 TPHFPMA-------DAFELNLSCPHA---ENVGMAVGSDPELVKEIVAEVKRSTEKPVFA 174
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+ D+ E + A G + V A+NT+ M ID+ + +P+ + GG S +A
Sbjct: 175 KLSPNVLDVVEIGKAAEEGGVDAVVAVNTVKG-MSIDIVSRKPKLS----NISGGVSGEA 229
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ PIAL V + + + D + G+GG+ T D EFIL GA VQ+ + + +
Sbjct: 230 IKPIALKCVWDL-------YKELDVPVIGVGGITTWKDVVEFILAGATAVQIGSA-LFYS 281
Query: 344 YGLVKRLCEELKDFMKMHNFSSIE 367
+ + L E LK + + S +E
Sbjct: 282 HRIFYSLVESLKAYTRSTGESLVE 305
>gi|385805323|ref|YP_005841721.1| Dihydroorotate dehydrogenase [Fervidicoccus fontis Kam940]
gi|383795186|gb|AFH42269.1| Dihydroorotate dehydrogenase [Fervidicoccus fontis Kam940]
Length = 308
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 168/329 (51%), Gaps = 32/329 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L+I + G+ + NP + SG G N +KR ++ G+GAVV+KT++ ++ N P
Sbjct: 7 LNIELAGIILKNPLMNASGILGQNKEAIKRLYEYGFGAVVSKTIT-PMPRIGNKPPIILS 65
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
L G +A +G EN ++ +++E K+L I I + N+ +
Sbjct: 66 LPNGGLINA----VGLEN---PGKGTIKELVEEAKEL------NIPIIVSVGGTNEDEFS 112
Query: 167 ELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMT 226
E+ E +G +AIE+N SCPH + G +G D R + V +++ +PV AK+
Sbjct: 113 EVAKEAEISGANAIELNLSCPH---TKGYGLEIGADPRNVFNVVKNVSSIIKIPVIAKLG 169
Query: 227 PNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHP 286
N I E + AL +G++ + INT+ ++ ID+ TL+P + GG S +HP
Sbjct: 170 LN-DKIVEASGKALEAGAKALGLINTVKAIY-IDVYTLKPVLS----NIHGGLSGPPIHP 223
Query: 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG--Y 344
IA+ + + + ++E + G GGV+ DAAEFI GA +Q+ + ++ +
Sbjct: 224 IAVRVIYDVYREYRAE-------IIGSGGVKDWKDAAEFISAGAKAIQIGSALISNDDPK 276
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+K + L+++++ HN +S+ + G++
Sbjct: 277 HTIKSILGGLENWLRFHNVTSLLELVGSA 305
>gi|289522475|ref|ZP_06439329.1| dihydroorotate dehydrogenase(DHOdehase) [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289504311|gb|EFD25475.1| dihydroorotate dehydrogenase(DHOdehase) [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 363
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 163/356 (45%), Gaps = 46/356 (12%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+L + + G++ NP +I +GPP NY +KR + G G VV KT+S AA V PR
Sbjct: 3 NLKVKIAGMEFENPLIIAAGPPSRNYETIKRMVEGGAGGVVTKTISAKAADV----PRPC 58
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ K I N EL S+ E LKE P I++ Y
Sbjct: 59 M------AAFKESFI---NTELWSEHSPEHWLKEEYDKIYELPVPIIVGL---GYTAEEL 106
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINA--KATV-PVW 222
+LI + E DA E++ VG+D L V + A KAT P+
Sbjct: 107 TDLIPKTEPFA-DAFELSTH------------YVGRD---LTPVLNTVTAARKATKKPII 150
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY-SC 281
K++P + D+ E + G + ++AIN++ + IDLKT P G T G+ S
Sbjct: 151 VKVSPGVPDLAELGKKLEEVGVDALAAINSVGPALRIDLKTGLP---YMGSDTGYGWVSG 207
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
A+ IAL V ++ + + G+GGV +G D E + GA+ VQ+CT ++
Sbjct: 208 PAIKGIALRHVFELSHAV-------SIPVIGVGGVSSGEDVIEMFMAGASAVQICTQAIL 260
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAV 397
G KR+ +E ++ H +SS+E+ +G + + +++ E + ++ + K +
Sbjct: 261 EGPKAFKRIAQETSKWLDEHGYSSLEEIKGLTAKKWSSRKEPLVKVTPSVNEEKCI 316
>gi|282850078|ref|ZP_06259460.1| dihydroorotate dehydrogenase 1B [Veillonella parvula ATCC 17745]
gi|282580267|gb|EFB85668.1| dihydroorotate dehydrogenase 1B [Veillonella parvula ATCC 17745]
Length = 316
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 157/341 (46%), Gaps = 41/341 (12%)
Query: 38 SDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEG--WGAVVAKTVSLDAA 95
+++ + P L+I G++M NP + SG F G + + + + A
Sbjct: 7 NNTVTPNPKLAIDYCGIKMKNPIIAASG-----------TFGNGPEYAGYLDLSNEVGAI 55
Query: 96 KVINVTPRYAR----LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKI 151
V +TP+ R S IG EN ++ + +L + ++ Y +
Sbjct: 56 SVKGLTPKGRHGNPGTRIAETPSGVLNCIGLENPG--AEHFVRKILPDLEK----YDVPL 109
Query: 152 LIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCG 211
L ++ AW + + + GI +EVN SCP+ E G A G D +++E V
Sbjct: 110 LANMSAGTIDEFAW--MAETLSVDGIAGLEVNVSCPNVECE---GMAFGVDSKVVEAVTK 164
Query: 212 WINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVE 271
+ PV K++PN+TDI E A+ G GVS INT++ M ID+ +P V
Sbjct: 165 AVRKVTDKPVIVKLSPNVTDIVEIAKAVEAGGGNGVSLINTLLG-MAIDIHRRKP---VL 220
Query: 272 GYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGAN 331
G + GG S AV P+AL +M+ + + G+GG+ TG DA EF++ GA
Sbjct: 221 G-NIYGGLSGPAVKPVAL-------RMIHQVYKGVTIPIIGLGGIMTGTDAIEFMMAGAQ 272
Query: 332 TVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
VQV T M+ + R+ E+ ++++ HN +I D GA
Sbjct: 273 AVQVGTATMVDPTA-ISRIAREMSEYVEQHNLDNITDIVGA 312
>gi|404496698|ref|YP_006720804.1| dihydroorotate dehydrogenase 1B [Geobacter metallireducens GS-15]
gi|418065354|ref|ZP_12702728.1| dihydroorotate dehydrogenase family protein [Geobacter
metallireducens RCH3]
gi|123571803|sp|Q39UK4.1|PYRDB_GEOMG RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|78194303|gb|ABB32070.1| dihydroorotate dehydrogenase [Geobacter metallireducens GS-15]
gi|373562532|gb|EHP88743.1| dihydroorotate dehydrogenase family protein [Geobacter
metallireducens RCH3]
Length = 305
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 39/333 (11%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
PDLS+ + G+++ NP + SG G E GA++ K +SL K N TPR
Sbjct: 4 PDLSVEIAGIKLRNPVMTASGTFGYGEEFAAYVNLEKIGAIITKGLSLKP-KAGNPTPRI 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKIL--IASIMEEYNK 162
G + IG +N+ + D +E K+ L+ + I+ + +EEY +
Sbjct: 63 QETTGGMLNA-----IGLQNVGI--DAFIE---KKVPFLRTVNTPAIVNFFGNTVEEYAE 112
Query: 163 AAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219
A E +D++ E + +E+N SCP HG G G + + V +
Sbjct: 113 LA--ERLDKIPE--VAGMEINISCPNVKHG------GIVFGTEPKAAYSVVKAVREATIK 162
Query: 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279
PV K++PN+TDI E A + ++ +S INT+ M IDLK+ RP + GG
Sbjct: 163 PVIVKLSPNVTDIVEMAWACADAEADALSLINTLTG-MAIDLKSRRPILA----NVTGGL 217
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S AV P+AL V +AK +K + GIGG+ +G DA EF+L GA VQV T
Sbjct: 218 SGPAVKPVALRMVWQVAKAVK-------IPVIGIGGIMSGTDALEFMLAGATAVQVGTAN 270
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
+ +R+ E++ ++ + + +++ GA
Sbjct: 271 FLDPAA-SERIAAEMEQYLVNNGITDVKELIGA 302
>gi|331266573|ref|YP_004326203.1| dihydroorotate dehydrogenase [Streptococcus oralis Uo5]
gi|326683245|emb|CBZ00863.1| dihydroorotate dehydrogenase [Streptococcus oralis Uo5]
Length = 312
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 157/332 (47%), Gaps = 41/332 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N L E +L E L+ YP +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQNPGL------EAVLAEKLPWLEREYPTLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
AA I + + AIE+N SCP HG G +GQD L EV +
Sbjct: 113 -AAVSRGISKA--ANVKAIELNISCPNVDHG----NHGLLIGQDPDLAYEVVKAAVEASD 165
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VPV+ K+TP++TD+ A+ A +G+ G++ INT++ M DLKT +P + T GG
Sbjct: 166 VPVYVKLTPSVTDVVTIAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GG 220
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 221 MSGPAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTA 273
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+ED R
Sbjct: 274 NFTNPYA-CPDIIEHLPKVMDKYGISSLEDLR 304
>gi|336053844|ref|YP_004562131.1| dihydroorotate dehydrogenase [Lactobacillus kefiranofaciens ZW3]
gi|333957221|gb|AEG40029.1| Dihydroorotate dehydrogenase [Lactobacillus kefiranofaciens ZW3]
Length = 307
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 162/325 (49%), Gaps = 30/325 (9%)
Query: 49 ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARL 107
+ + GL + NP + SG G + FD GA+V KT + A N P+ A L
Sbjct: 6 VNLPGLDLKNPVMPASGTFGFGDVPAAQKFDLNELGAMVIKTTT-PHATTGNPQPQIAVL 64
Query: 108 RAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEE 167
G S G +++ IS++ +L+ YPD ++AS+ + ++ + E
Sbjct: 65 EDGVLNSVGLTNPGVDHV--ISEK--------LTKLRHQYPDLPIMASVGGD-SEEDYVE 113
Query: 168 LIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMT 226
+ ++ ++G ++A+E+N SCP+ + G + G ++E++ I +P++ K+T
Sbjct: 114 VAKKLSDSGLVNALEINVSCPN---VAQGGMSFGVHAGVVEKLTKKIKMAVALPIYVKLT 170
Query: 227 PNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHP 286
PN+TDI E A+ A G++G+S INT++ M ID+KT +P + G++ GG S +AV P
Sbjct: 171 PNVTDIVEIAKAAESGGADGISMINTLLG-MRIDIKTRKP---LLGHNM-GGLSGEAVKP 225
Query: 287 IALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGL 346
IA+ +M+ + G+GG+ + D EF+L GAN V V T +
Sbjct: 226 IAI-------RMISQVRQATTLPIIGMGGINSAQDVIEFMLAGANAVAVGTA-HFNDELA 277
Query: 347 VKRLCEELKDFMKMHNFSSIEDFRG 371
K + EEL ++ I D G
Sbjct: 278 SKHIAEELPAELEKLGVEDINDLVG 302
>gi|319902125|ref|YP_004161853.1| dihydroorotate oxidase B, catalytic subunit [Bacteroides helcogenes
P 36-108]
gi|319417156|gb|ADV44267.1| dihydroorotate oxidase B, catalytic subunit [Bacteroides helcogenes
P 36-108]
Length = 303
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 162/330 (49%), Gaps = 35/330 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ ++ LQM NP + SG G G ++ K +L + N PR A
Sbjct: 3 DLSVKISELQMKNPVMTASGTFGYGEEFADFIDISRIGGIIVKGTTLHKREG-NSYPRMA 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKIL--IASIMEEYNK 162
+G + +G +N + + ++ + ++K + + I+ S +E+Y K
Sbjct: 62 ETPSGMLNA-----VGLQN------KGVHYFVEHIYPRIKDIQTNMIVNVSGSAIEDYVK 110
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
A +I+ +++ I AIE+N SCP+ ++ G A G + EEV + + +
Sbjct: 111 TA--AIINELDK--IPAIELNISCPN---VKQGGMAFGVTAKGAEEVVKAVRSVYKKTLI 163
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
K++PN+TDITE AR A G++ VS INT++ M ID ++ RP + GG S
Sbjct: 164 VKLSPNVTDITEIARAAENGGADSVSLINTLLG-MAIDAESRRPILS----TVTGGMSGA 218
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
AV PIAL V +AK +K + G+GG+ DA EF+L GA+ +Q+ T +
Sbjct: 219 AVKPIALRMVWQVAKAVK-------IPVIGLGGIMGWKDAVEFMLAGASAIQIGTANFID 271
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
VK + E + D++ H + S+ D GA
Sbjct: 272 PTVTVK-VAEGINDYLDRHGYKSVTDIIGA 300
>gi|148264205|ref|YP_001230911.1| dihydroorotate dehydrogenase 1B [Geobacter uraniireducens Rf4]
gi|189038422|sp|A5G3H0.1|PYRDB_GEOUR RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|146397705|gb|ABQ26338.1| dihydroorotate oxidase B, catalytic subunit [Geobacter
uraniireducens Rf4]
Length = 305
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 161/332 (48%), Gaps = 31/332 (9%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
+PDLS+ V G+++ NP + SG G E GA++ K +S+ K N TPR
Sbjct: 3 KPDLSVEVAGIKLRNPVMTASGTFGYGKEFADYLDLEKIGAIITKGLSIRP-KAGNPTPR 61
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKI-LIASIMEEYNK 162
G + IG +N+ + D ++ L + + P + L + +EEY +
Sbjct: 62 IVETPGGMLNA-----IGLQNVGI--DAFIQEKLPFLRTVNT--PVIVNLYGNTLEEYGE 112
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
A E +D++ E + +EVN SCP+ ++ G G D EV + P+
Sbjct: 113 LA--EKLDKLPE--VAGLEVNISCPN---VKQGGIVFGTDPNAAYEVVSLVRESTIKPLI 165
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
K++PN+T++ E A + +G++ +S INT+ M IDL+ RP + GG S
Sbjct: 166 VKLSPNVTNVVEMANACVDAGADALSLINTLTG-MAIDLQKRRPILA----NMTGGLSGP 220
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ P+AL V +A+ +K + GIGG+ T DA EF+L GA VQV T +
Sbjct: 221 AIKPVALRMVWQVAQAVK-------VPVIGIGGIMTATDALEFMLAGATAVQVGTANFLD 273
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+ + E ++ +++ + + +++ GA I
Sbjct: 274 PSA-AQTIAEGMETYLEENGIADVKELIGALI 304
>gi|414152976|ref|ZP_11409303.1| Dihydroorotate dehydrogenase B (NAD(+)),catalytic subunit
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411455358|emb|CCO07205.1| Dihydroorotate dehydrogenase B (NAD(+)),catalytic subunit
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 307
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 165/334 (49%), Gaps = 37/334 (11%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTP 102
+P+L++ V G++M NP SG G + FD GAVV K + + + N TP
Sbjct: 2 KPNLAVNVGGIKMKNPVTTASGTFGFGLE-YRPYFDLNRLGAVVVKGTTWEPRQG-NKTP 59
Query: 103 RYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILI---ASIMEE 159
R AG + IG +N ++ +++ + A K+++ S +EE
Sbjct: 60 RLVETPAGILNA-----IGLQN------PGVDYLVQHYAPYFATLQTKVIVNIAGSTVEE 108
Query: 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219
Y + A E ++ V GI +EVN SCP+ +K G A G +V + +
Sbjct: 109 YARVA--ERLNGVP--GIAGLEVNISCPN---VKKGGLAFGSRPSTAAQVTRAVKGATDL 161
Query: 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279
PV K++PN+TDI E A+ +G++G+S INT++ M ID++ +P V G + GG
Sbjct: 162 PVIVKLSPNVTDIEEIAKAVEEAGADGLSLINTLLG-MAIDIRRRKP---VLG-NVMGGL 216
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S AV P+A+ V + + +K + G+GG+ T DA EFIL GA V V T
Sbjct: 217 SGPAVKPVAVRAVWQVYRAVK-------LPIIGMGGISTAADALEFILAGATAVAVGTAS 269
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
++ + L E ++ ++K + + I++ GA+
Sbjct: 270 FINPRAALDVL-EGIELYLKENKITDIKELVGAA 302
>gi|78486289|ref|YP_392214.1| dihydroorotate dehydrogenase [Thiomicrospira crunogena XCL-2]
gi|78364575|gb|ABB42540.1| dihydroorotate oxidase B, catalytic subunit [Thiomicrospira
crunogena XCL-2]
Length = 297
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 116/210 (55%), Gaps = 13/210 (6%)
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
+ E++ ++T + AIEVN SCP+ +K GAA G D + +V A + P+ K
Sbjct: 92 YAEVVRLFDQTDLPAIEVNISCPN---VKKGGAAFGNDPDMAAKVVEACRANTSKPLIVK 148
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
++PN TDI E AR + +G++ +SAINT+M M ID+ + RP + GG S A+
Sbjct: 149 LSPNQTDIAEGARRVIDAGADMLSAINTLMG-MQIDIHSARPTLG----NNQGGLSGPAI 203
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
P+AL KV + ++ K + + G+GG+ + DA EF+L GA+ V V T M
Sbjct: 204 KPVALLKVHQVYQVAKQH----NVPIIGLGGIASADDAIEFLLAGASMVAVGT-AMAKDP 258
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASI 374
LVK++ + ++ +M + + S+ + G I
Sbjct: 259 LLVKKINQGIEKYMARYGYQSVAEMTGKLI 288
>gi|386714200|ref|YP_006180523.1| dihydroorotate dehydrogenase (NAD+) catalytic subunit [Halobacillus
halophilus DSM 2266]
gi|384073756|emb|CCG45249.1| dihydroorotate dehydrogenase (NAD+) catalytic subunit [Halobacillus
halophilus DSM 2266]
Length = 310
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 169/344 (49%), Gaps = 40/344 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+++ GL + NP + SG G + GAV+ K + + + N PR A
Sbjct: 2 DISVSLPGLDLKNPIMPASGCFGFGKEFAQFYDLSELGAVILKAATGEK-RYGNEAPRVA 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI----MEEYN 161
+G + IG +N +E ++KE Y D LIA++ MEEY
Sbjct: 61 ETSSGMLNA-----IGLQN------PGVEKIVKEEIPFLKTY-DTPLIANVSGSTMEEYE 108
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
A + +DA+E+N SCP+ ++ G G D RL EEV + + +TVPV
Sbjct: 109 HVAATICKE------VDALELNISCPN---VKEGGVQFGTDPRLAEEVTSRVKSVSTVPV 159
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K++PN+TDI A+ A G++G+S INT+ M ID T +P + GG S
Sbjct: 160 YVKLSPNVTDIVALAKAAAAGGADGLSMINTLTG-MRIDPATRKPIIS----NQTGGLSG 214
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+A+ +M+ + + + G+GG+ET D E++L GA+ V V +
Sbjct: 215 PAVKPVAI-------RMIHQVYQAVNLPIIGMGGIETTDDIIEYLLAGASAVAVGSANFK 267
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVR 385
+ + K L E+L + ++ + FSSIE+ G + Y T + L R
Sbjct: 268 NPL-ICKELIEQLPEALERYGFSSIEEVIGGA-HYETAASGLFR 309
>gi|325261797|ref|ZP_08128535.1| dihydroorotate oxidase [Clostridium sp. D5]
gi|324033251|gb|EGB94528.1| dihydroorotate oxidase [Clostridium sp. D5]
Length = 300
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 163/332 (49%), Gaps = 42/332 (12%)
Query: 47 LSITVN--GLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRY 104
++ TVN G+++ NP + SG G+ + GAVV K V+ + N TPR
Sbjct: 1 MNTTVNLAGVELKNPVMTASGTFGSGEEYSEFVDLNRLGAVVTKGVA-NVPWPGNPTPRI 59
Query: 105 ARLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILI---ASIMEE 159
A G + IG +N I++ +R + + K Y KI++ EE
Sbjct: 60 AETYGGMMNA-----IGLQNPGIDVFCERDIPFLKK--------YDTKIIVNVCGKTTEE 106
Query: 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219
Y E+++R+ + +D +E+N SCP+ ++ G A GQ+ + +EE+ + +A
Sbjct: 107 YC-----EVVERLADEPVDLLEINISCPN---VKEGGIAFGQNPKAVEEITREVKRRAKQ 158
Query: 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279
PV K++PN+TDITE A+ A G++ +S INT+ M ID+ + GG
Sbjct: 159 PVIMKLSPNVTDITETAKAAEAGGADVLSLINTLTG-MKIDIH----RQAFALANKTGGV 213
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S AV PIA+ V +A +K + G+GG+ T DA EFIL GA V V T
Sbjct: 214 SGPAVKPIAVRMVYQVANAVK-------VPVIGMGGITTYEDAVEFILAGATAVSVGTAN 266
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ V+ + E ++ +M+ ++F +I + G
Sbjct: 267 FFNPTATVE-IVEGIERYMEKYHFENISEMVG 297
>gi|452077283|gb|AGF93247.1| dihydroorotate dehydrogenase family protein [uncultured organism]
Length = 302
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 147/316 (46%), Gaps = 30/316 (9%)
Query: 58 NPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKG 117
NP ++ SG GT + R G GAVV K++ K + P L G
Sbjct: 13 NPVILASGIMGTTGASLTRMAYNGAGAVVTKSIG-PVPKKGHSNPTMIELENG------- 64
Query: 118 QIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGI 177
+ N + + ++E K K I IASI + + ++ + +
Sbjct: 65 ----FLNAMGLPNPSYTEFVQEIKNAKNNTSTPI-IASIFAG-DTEGFVKVAEELSSANP 118
Query: 178 DAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPAR 237
D E+N SCPH GA +G D L+EE+ + VPVW K+TPN+T+I + +
Sbjct: 119 DGFELNVSCPHA---EGYGATIGCDSCLVEEITASVCDVIDVPVWVKLTPNVTNIVDIGK 175
Query: 238 VALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAK 297
A R G++ V AINT+ M ID+ T P + G + GG S +A+ PIA+ K
Sbjct: 176 AAERGGADAVVAINTVRG-MSIDINTGYP---ILG-NRYGGLSGRAIRPIAV-------K 223
Query: 298 MMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDF 357
+ + D + G+GGV DA E I+ GA+ VQV + V + K + ++D+
Sbjct: 224 CVYDLYASLDIPVVGVGGVSCWQDAVEMIMAGASAVQVGSAV-SQSMDVFKSISSGIEDY 282
Query: 358 MKMHNFSSIEDFRGAS 373
+ + +S+I++ G S
Sbjct: 283 LSANEYSTIDEIIGFS 298
>gi|148998601|ref|ZP_01826041.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae
SP11-BS70]
gi|168575626|ref|ZP_02721562.1| dihydroorotate dehydrogenase B, catalytic subunit (dihydroorotate
oxidase b) (dhodehase b) (dhodase b) (dhod b)
[Streptococcus pneumoniae MLV-016]
gi|307067621|ref|YP_003876587.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae AP200]
gi|417698378|ref|ZP_12347551.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA41317]
gi|418148390|ref|ZP_12785155.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA13856]
gi|419470919|ref|ZP_14010778.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA07914]
gi|419481988|ref|ZP_14021781.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA40563]
gi|419503777|ref|ZP_14043446.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47760]
gi|419505898|ref|ZP_14045559.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA49194]
gi|421238595|ref|ZP_15695163.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2071247]
gi|421244785|ref|ZP_15701286.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2081685]
gi|421314131|ref|ZP_15764721.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA47562]
gi|147755599|gb|EDK62646.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae
SP11-BS70]
gi|183578496|gb|EDT99024.1| dihydroorotate dehydrogenase B, catalytic subunit (dihydroorotate
oxidase b) (dhodehase b) (dhodase b) (dhod b)
[Streptococcus pneumoniae MLV-016]
gi|306409158|gb|ADM84585.1| Dihydroorotate dehydrogenase [Streptococcus pneumoniae AP200]
gi|332202819|gb|EGJ16888.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA41317]
gi|353813065|gb|EHD93298.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA13856]
gi|379545635|gb|EHZ10774.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA07914]
gi|379580862|gb|EHZ45751.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA40563]
gi|379606454|gb|EHZ71201.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47760]
gi|379607812|gb|EHZ72558.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA49194]
gi|395602075|gb|EJG62219.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2071247]
gi|395609285|gb|EJG69372.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2081685]
gi|395914631|gb|EJH25475.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA47562]
Length = 312
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKA--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEYAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLEELR 304
>gi|15900841|ref|NP_345445.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae TIGR4]
gi|148988405|ref|ZP_01819852.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae SP6-BS73]
gi|168485916|ref|ZP_02710424.1| dihydroorotate dehydrogenase B, catalytic subunit (dihydroorotate
oxidase b) (dhodehase b) (dhodase b) (dhod b)
[Streptococcus pneumoniae CDC1087-00]
gi|168494393|ref|ZP_02718536.1| dihydroorotate dehydrogenase B, catalytic subunit (dihydroorotate
oxidase b) (dhodehase b) (dhodase b) (dhod b)
[Streptococcus pneumoniae CDC3059-06]
gi|221231727|ref|YP_002510879.1| dihydroorotate dehydrogenase, catalytic subunit [Streptococcus
pneumoniae ATCC 700669]
gi|237650887|ref|ZP_04525139.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae CCRI
1974]
gi|237821895|ref|ZP_04597740.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae CCRI
1974M2]
gi|298229842|ref|ZP_06963523.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298254541|ref|ZP_06978127.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|303259876|ref|ZP_07345851.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae SP-BS293]
gi|303262290|ref|ZP_07348234.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae SP14-BS292]
gi|303264712|ref|ZP_07350630.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae BS397]
gi|303267241|ref|ZP_07353106.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae BS457]
gi|303269527|ref|ZP_07355292.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae BS458]
gi|342164088|ref|YP_004768727.1| dihydroorotate dehydrogenase 1B [Streptococcus pseudopneumoniae
IS7493]
gi|383937516|ref|ZP_09990772.1| dihydroorotate oxidase, catalytic subunit [Streptococcus
pseudopneumoniae SK674]
gi|415698171|ref|ZP_11457082.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 459-5]
gi|415749366|ref|ZP_11477310.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae SV35]
gi|415752050|ref|ZP_11479161.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae SV36]
gi|417686401|ref|ZP_12335679.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA41301]
gi|418073748|ref|ZP_12711006.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA11184]
gi|418076070|ref|ZP_12713309.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47502]
gi|418078457|ref|ZP_12715680.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 4027-06]
gi|418080421|ref|ZP_12717633.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 6735-05]
gi|418082889|ref|ZP_12720090.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA44288]
gi|418086699|ref|ZP_12723869.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47033]
gi|418089360|ref|ZP_12726517.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA43265]
gi|418098337|ref|ZP_12735436.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 6901-05]
gi|418100791|ref|ZP_12737877.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 7286-06]
gi|418105026|ref|ZP_12742085.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA44500]
gi|418114463|ref|ZP_12751453.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 5787-06]
gi|418116703|ref|ZP_12753674.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 6963-05]
gi|418123238|ref|ZP_12760172.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA44378]
gi|418127824|ref|ZP_12764720.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae NP170]
gi|418135025|ref|ZP_12771882.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA11426]
gi|418136998|ref|ZP_12773840.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA11663]
gi|418139313|ref|ZP_12776143.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA13338]
gi|418143776|ref|ZP_12780576.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA13494]
gi|418146186|ref|ZP_12782968.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA13637]
gi|418159633|ref|ZP_12796332.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA17227]
gi|418173336|ref|ZP_12809950.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA41277]
gi|418177996|ref|ZP_12814580.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA41565]
gi|418180421|ref|ZP_12816992.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA41688]
gi|418182594|ref|ZP_12819155.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA43380]
gi|418184782|ref|ZP_12821329.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47283]
gi|418199876|ref|ZP_12836321.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47976]
gi|418202238|ref|ZP_12838668.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA52306]
gi|418216415|ref|ZP_12843139.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae Netherlands15B-37]
gi|418221017|ref|ZP_12847671.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47751]
gi|418223504|ref|ZP_12850144.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 5185-06]
gi|418969054|ref|ZP_13520212.1| dihydroorotate dehydrogenase 1B [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|419431363|ref|ZP_13971508.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae EU-NP05]
gi|419433576|ref|ZP_13973694.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA40183]
gi|419435828|ref|ZP_13975921.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 8190-05]
gi|419440183|ref|ZP_13980235.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA40410]
gi|419442450|ref|ZP_13982481.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA13224]
gi|419444821|ref|ZP_13984836.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA19923]
gi|419446965|ref|ZP_13986970.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 7879-04]
gi|419455363|ref|ZP_13995323.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae EU-NP04]
gi|419457346|ref|ZP_13997291.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA02254]
gi|419463967|ref|ZP_14003860.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA04175]
gi|419468832|ref|ZP_14008703.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA06083]
gi|419473029|ref|ZP_14012880.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA13430]
gi|419493100|ref|ZP_14032827.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47210]
gi|419495281|ref|ZP_14034999.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47461]
gi|419497148|ref|ZP_14036858.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47522]
gi|419510587|ref|ZP_14050231.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae NP141]
gi|419520893|ref|ZP_14060489.1| dihydroorotate dehydrogenase family domain protein [Streptococcus
pneumoniae GA05245]
gi|419523185|ref|ZP_14062765.1| dihydroorotate dehydrogenase family domain protein [Streptococcus
pneumoniae GA13723]
gi|419530259|ref|ZP_14069789.1| dihydroorotate dehydrogenase family domain protein [Streptococcus
pneumoniae GA40028]
gi|419534431|ref|ZP_14073934.1| dihydroorotate dehydrogenase family domain protein [Streptococcus
pneumoniae GA17457]
gi|421212949|ref|ZP_15669910.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2070108]
gi|421215194|ref|ZP_15672122.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2070109]
gi|421217488|ref|ZP_15674389.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2070335]
gi|421233950|ref|ZP_15690572.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2061617]
gi|421247225|ref|ZP_15703712.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2082170]
gi|421249259|ref|ZP_15705721.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2082239]
gi|421268168|ref|ZP_15719039.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Streptococcus pneumoniae SPAR95]
gi|421280952|ref|ZP_15731750.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA04672]
gi|421296042|ref|ZP_15746754.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA58581]
gi|421303182|ref|ZP_15753846.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA17484]
gi|81855037|sp|Q97R65.1|PYRDB_STRPN RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|14972438|gb|AAK75085.1| dihydroorotate dehydrogenase B [Streptococcus pneumoniae TIGR4]
gi|147926086|gb|EDK77160.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae SP6-BS73]
gi|183571069|gb|EDT91597.1| dihydroorotate dehydrogenase B, catalytic subunit (dihydroorotate
oxidase b) (dhodehase b) (dhodase b) (dhod b)
[Streptococcus pneumoniae CDC1087-00]
gi|183575702|gb|EDT96230.1| dihydroorotate dehydrogenase B, catalytic subunit (dihydroorotate
oxidase b) (dhodehase b) (dhodase b) (dhod b)
[Streptococcus pneumoniae CDC3059-06]
gi|220674187|emb|CAR68715.1| dihydroorotate dehydrogenase, catalytic subunit [Streptococcus
pneumoniae ATCC 700669]
gi|302636613|gb|EFL67104.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae SP14-BS292]
gi|302639081|gb|EFL69541.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae SP-BS293]
gi|302640963|gb|EFL71345.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae BS458]
gi|302643250|gb|EFL73532.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae BS457]
gi|302645799|gb|EFL76028.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae BS397]
gi|332076238|gb|EGI86704.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA41301]
gi|341933970|gb|AEL10867.1| dihydroorotate dehydrogenase 1B [Streptococcus pseudopneumoniae
IS7493]
gi|353747648|gb|EHD28304.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 4027-06]
gi|353749859|gb|EHD30502.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47502]
gi|353750595|gb|EHD31233.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA11184]
gi|353752961|gb|EHD33585.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 6735-05]
gi|353756802|gb|EHD37401.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA44288]
gi|353758960|gb|EHD39546.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47033]
gi|353762046|gb|EHD42609.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA43265]
gi|353769697|gb|EHD50213.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 6901-05]
gi|353772727|gb|EHD53232.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 7286-06]
gi|353778096|gb|EHD58566.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA44500]
gi|353787205|gb|EHD67612.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 5787-06]
gi|353789680|gb|EHD70072.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 6963-05]
gi|353797325|gb|EHD77660.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA44378]
gi|353800285|gb|EHD80599.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae NP170]
gi|353809517|gb|EHD89777.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA13494]
gi|353814982|gb|EHD95204.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA13637]
gi|353821366|gb|EHE01542.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA17227]
gi|353840035|gb|EHE20109.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA41277]
gi|353844770|gb|EHE24813.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA41565]
gi|353846033|gb|EHE26071.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA41688]
gi|353850831|gb|EHE30835.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA43380]
gi|353851318|gb|EHE31314.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47283]
gi|353864923|gb|EHE44832.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47976]
gi|353868041|gb|EHE47931.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA52306]
gi|353873466|gb|EHE53327.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae Netherlands15B-37]
gi|353875940|gb|EHE55790.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47751]
gi|353878302|gb|EHE58132.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 5185-06]
gi|353901625|gb|EHE77157.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA11663]
gi|353902262|gb|EHE77792.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA11426]
gi|353905556|gb|EHE80979.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA13338]
gi|379532344|gb|EHY97573.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA02254]
gi|379539186|gb|EHZ04365.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA04175]
gi|379539907|gb|EHZ05084.1| dihydroorotate dehydrogenase family domain protein [Streptococcus
pneumoniae GA05245]
gi|379546935|gb|EHZ12073.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA06083]
gi|379552536|gb|EHZ17625.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA13430]
gi|379554417|gb|EHZ19497.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA13224]
gi|379557916|gb|EHZ22953.1| dihydroorotate dehydrogenase family domain protein [Streptococcus
pneumoniae GA13723]
gi|379565165|gb|EHZ30158.1| dihydroorotate dehydrogenase family domain protein [Streptococcus
pneumoniae GA17457]
gi|379572514|gb|EHZ37471.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA19923]
gi|379574258|gb|EHZ39202.1| dihydroorotate dehydrogenase family domain protein [Streptococcus
pneumoniae GA40028]
gi|379576577|gb|EHZ41501.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA40183]
gi|379579950|gb|EHZ44846.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA40410]
gi|379595138|gb|EHZ59947.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47210]
gi|379595363|gb|EHZ60171.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47461]
gi|379601141|gb|EHZ65917.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47522]
gi|379614505|gb|EHZ79215.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 7879-04]
gi|379615963|gb|EHZ80664.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 8190-05]
gi|379629820|gb|EHZ94414.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae EU-NP04]
gi|379630729|gb|EHZ95310.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae EU-NP05]
gi|379633780|gb|EHZ98349.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae NP141]
gi|381309746|gb|EIC50579.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae SV36]
gi|381317176|gb|EIC57906.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 459-5]
gi|381317660|gb|EIC58385.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae SV35]
gi|383352479|gb|EID30175.1| dihydroorotate dehydrogenase 1B [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383715603|gb|EID71553.1| dihydroorotate oxidase, catalytic subunit [Streptococcus
pseudopneumoniae SK674]
gi|395580536|gb|EJG41017.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2070108]
gi|395581327|gb|EJG41799.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2070109]
gi|395584974|gb|EJG45366.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2070335]
gi|395602847|gb|EJG62989.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2061617]
gi|395614560|gb|EJG74579.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2082239]
gi|395614861|gb|EJG74879.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2082170]
gi|395871084|gb|EJG82195.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Streptococcus pneumoniae SPAR95]
gi|395882113|gb|EJG93160.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA04672]
gi|395897255|gb|EJH08219.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA58581]
gi|395901804|gb|EJH12740.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA17484]
Length = 312
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKA--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLEELR 304
>gi|419479791|ref|ZP_14019598.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA19101]
gi|419499481|ref|ZP_14039180.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47597]
gi|379570957|gb|EHZ35916.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA19101]
gi|379602535|gb|EHZ67306.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47597]
Length = 312
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIISASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKA--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLEELR 304
>gi|306829318|ref|ZP_07462508.1| dihydroorotate dehydrogenase B [Streptococcus mitis ATCC 6249]
gi|304428404|gb|EFM31494.1| dihydroorotate dehydrogenase B [Streptococcus mitis ATCC 6249]
Length = 328
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 157/332 (47%), Gaps = 41/332 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 22 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 80
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP +IA++ +EY
Sbjct: 81 TPAGMLNA-----IGLQN------PGLEAVLAEKLPWLEREYPTLPIIANVAGFSKQEY- 128
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
AA I + + AIE+N SCP HG G +GQD L EV +
Sbjct: 129 -AAVSRGISKA--ANVKAIELNISCPNVDHG----NHGLLIGQDPDLAYEVVKAAVEASD 181
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VPV+ K+TP++TD+ A+ A +G+ G++ INT++ M DLKT +P + T GG
Sbjct: 182 VPVYVKLTPSVTDVVTIAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GG 236
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 237 MSGPAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTA 289
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+ED R
Sbjct: 290 NFTNPYA-CPDIIEHLPKVMDKYGISSLEDLR 320
>gi|417850198|ref|ZP_12496112.1| dihydroorotate dehydrogenase 1B [Streptococcus mitis SK1080]
gi|339455041|gb|EGP67652.1| dihydroorotate dehydrogenase 1B [Streptococcus mitis SK1080]
Length = 312
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+A + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEA-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKA--ANVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASDVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 277 NPYA-CPDIIENLAKVMDKYGISSLENLR 304
>gi|15605646|ref|NP_213021.1| dihydroorotate dehydrogenase 1B [Aquifex aeolicus VF5]
gi|3914513|sp|O66461.1|PYRDA_AQUAE RecName: Full=Putative dihydroorotate dehydrogenase A (fumarate);
Short=DHOD A; Short=DHODase A; Short=DHOdehase A
gi|2982802|gb|AAC06426.1| dihydroorotase dehydrogenase [Aquifex aeolicus VF5]
Length = 306
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 157/330 (47%), Gaps = 40/330 (12%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ + G++ NP + SG G + GAVV K +SL ++ N TPR
Sbjct: 2 DLSVELFGIRFKNPVWVASGTFGYGVEAAEIYDISKLGAVVTKGLSLKE-RLGNETPRIV 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYP-----DKILIASIMEEY 160
G S Q G E K LK +YP D IA++ E
Sbjct: 61 ETPCGMLNSIGLQNPGVE-----------------KFLKEIYPKIKDVDTHFIANVFGET 103
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+ E + + I A E+N SCP+ +K G G D +L + I AK P
Sbjct: 104 EEEYVEVCMALEDADKIVAYELNVSCPN---VKKGGILFGHDPVILGNLVDRIKAKIKKP 160
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
+ K++PN+TD+TE A+V + +G++G+ INT+M M I++ +P+ + GG S
Sbjct: 161 LLVKLSPNVTDVTEFAKVCIENGADGLVLINTLMG-MKINIWKRKPDLA----TKTGGLS 215
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
A+ PIA+ + + + +F D+ + G+GG+ T DA E ++ GA+ VQV T
Sbjct: 216 GPAILPIAVRMIYQVYE----KFGDR-IPIIGVGGITTWEDAMEHVMAGASAVQVGTANF 270
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+K + E +++FMK N I+DF+
Sbjct: 271 YEPLAPLK-VIEGIENFMKSQN---IKDFK 296
>gi|431932916|ref|YP_007245962.1| dihydroorotate dehydrogenase family protein [Thioflavicoccus
mobilis 8321]
gi|431831219|gb|AGA92332.1| dihydroorotate dehydrogenase family protein [Thioflavicoccus
mobilis 8321]
Length = 315
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 33/337 (9%)
Query: 40 SASAEPDLSITVNGLQMPNPFVIGSGPPG--TNYTVMKRAFDEGWGAVVAKTVSLDAAKV 97
S +P L+I GL +P V+ SG G YT ++ + GAV K +L A ++
Sbjct: 4 SRVTDPRLAIDFCGLGFNSPLVLLSGCVGFGEEYTRVRGFSNRDVGAVCLKGTTL-APRL 62
Query: 98 INVTPRYARLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIAS 155
N R G + IG +N ++ + +R L + +F + + + + S
Sbjct: 63 GNRPHRVFETPCGMLNA-----IGLQNPGVDHVVERILPGL--DFAETRFIAN---VSGS 112
Query: 156 IMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINA 215
+EEY+ E+ R +++ IDAIE+N SCP+ ++ G A G D + EV
Sbjct: 113 TVEEYH-----EVTRRFDDSPIDAIEINISCPN---VKEGGVAFGNDIAMSAEVVAACRK 164
Query: 216 KATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYST 275
P+ K++PN TDI AR L +GS+ S INT+M M ID + RP V G +
Sbjct: 165 ATRKPLITKLSPNQTDIAANARACLEAGSDAFSVINTLMG-MAIDSERRRP---VIG-NN 219
Query: 276 PGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQV 335
GG S A+ PIAL KV + ++ + + G GG++ G DA EF++ GA+ V +
Sbjct: 220 QGGLSGPAIKPIALLKVHQVYQVCRRH----GVPIIGQGGIQDGRDALEFLIAGASAVGI 275
Query: 336 CTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
T + L + + + D++ H F + + G+
Sbjct: 276 GTALFYEPL-LCRDVNATIGDYLTRHGFKRVVELTGS 311
>gi|253579490|ref|ZP_04856759.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848991|gb|EES76952.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 300
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 158/333 (47%), Gaps = 44/333 (13%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+S+ + G++ NP + SG G+ GAV K V+ + N TPR A
Sbjct: 2 DMSVNIAGVEWKNPVTVASGTFGSGAEFADYVDINKLGAVTTKGVA-NVPWAGNPTPRVA 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILI---ASIMEEY 160
+ G + IG +N I+L +R + LK+ Y KI++ EEY
Sbjct: 61 EVYGGMMNA-----IGLQNPGIDLFCERDIP-FLKQ-------YDTKIIVNVCGHAPEEY 107
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+++R+ + ID +E+N SCP+ A GQD +EE+ I A P
Sbjct: 108 -----LAVVERLADQPIDMMEINISCPN---VNAGFLAFGQDAHHVEELTAQIKKIAKQP 159
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDL--KTLRPEPCVEGYSTPGG 278
V K+TPN+TDITE A+ A G++ VS INT+ M ID+ KT + GG
Sbjct: 160 VIMKLTPNVTDITEIAKGAEAGGADAVSLINTLTG-MKIDINRKTFALA------NKTGG 212
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S V PIA+ V +A+ + + + G+GG+ DA EFIL GA+ V V T
Sbjct: 213 VSGPIVKPIAVRMVYQVAQAV-------NIPIIGMGGISCAEDAIEFILAGASAVSVGTA 265
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
H + + + ++ +MK + F+S+++ G
Sbjct: 266 -NFHNPAVTLEVIDGIEAYMKKNGFNSVKEMVG 297
>gi|298503026|ref|YP_003724966.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae TCH8431/19A]
gi|298238621|gb|ADI69752.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae TCH8431/19A]
Length = 328
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 22 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 80
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 81 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 128
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 129 -AAVSHGISKA--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 184
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 185 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 239
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 240 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 292
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 293 NPYA-CPDIIENLPKVMDKYGISSLEELR 320
>gi|350563210|ref|ZP_08932032.1| dihydroorotate dehydrogenase family protein [Thioalkalimicrobium
aerophilum AL3]
gi|349779074|gb|EGZ33421.1| dihydroorotate dehydrogenase family protein [Thioalkalimicrobium
aerophilum AL3]
Length = 315
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 156/328 (47%), Gaps = 29/328 (8%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPG--TNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
DLS+ + G+ +P + SG G Y + ++ GAV K +L+ K+ N R
Sbjct: 3 DLSVNICGVVCHSPVAMASGNAGYGLEYQAVSGFHNQDVGAVFLKGTTLEP-KLGNKPDR 61
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
G S IG +N + D + +L + Y + +SI EEY
Sbjct: 62 VWETPNGLLNS-----IGLQNPGV--DYVVNQLLPQLDYSATQYFANVSGSSI-EEY--- 110
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
E+ R ++T + +E+N SCP+ +K GAA G D + V A T P+
Sbjct: 111 --AEVCRRFDQTALAGLEINISCPN---VKKGGAAFGNDPDMAARVVEACRASTTKPLII 165
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN TD+ E AR + +G++ +SAINT+M M I++ T RP+ + GG S A
Sbjct: 166 KLSPNQTDVAEGARRVIEAGADALSAINTLMG-MSINIDTWRPDLG----NNQGGLSGPA 220
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ P+AL +V + ++ K D + G+GGV DA EF L GA+ V V T +
Sbjct: 221 IKPVALLRVHQVYQVAKHH----DIPIIGLGGVSCAEDAIEFFLAGASMVAVGTALAKDP 276
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
L+K++ + + +++ S+ G
Sbjct: 277 L-LIKKMNKGIARYLEKRGLQSVSQLTG 303
>gi|182683910|ref|YP_001835657.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae CGSP14]
gi|182629244|gb|ACB90192.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae CGSP14]
Length = 330
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 24 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 82
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 83 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 130
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 131 -AAVSHGISKA--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 186
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 187 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 241
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 242 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 294
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 295 NPYA-CPDIIENLPKVMDKYGISSLEELR 322
>gi|322376458|ref|ZP_08050951.1| dihydroorotate dehydrogenase B [Streptococcus sp. M334]
gi|321282265|gb|EFX59272.1| dihydroorotate dehydrogenase B [Streptococcus sp. M334]
Length = 330
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 159/326 (48%), Gaps = 29/326 (8%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 24 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 82
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIMEEYNKAAW 165
AG + IG +N LE +L E L+ YP+ +IA++ ++K +
Sbjct: 83 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANV-AGFSKQEY 130
Query: 166 EELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
+ + + G + AIE+N SCP+ + G +GQD L +V + VPV+ K
Sbjct: 131 AAVSHGISKAGNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVESSGVPVYVK 189
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S AV
Sbjct: 190 LTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSGPAV 244
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
P+AL K+++ D + G+GGV++ A E L GA+ + V T + Y
Sbjct: 245 FPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFTNPY 297
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFR 370
+ E L M + SS+E+ R
Sbjct: 298 A-CPDIIENLPKVMDKYGISSLENLR 322
>gi|168491053|ref|ZP_02715196.1| dihydroorotate dehydrogenase B, catalytic subunit (dihydroorotate
oxidase b) (dhodehase b) (dhodase b) (dhod b)
[Streptococcus pneumoniae CDC0288-04]
gi|418193594|ref|ZP_12830086.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47439]
gi|183574652|gb|EDT95180.1| dihydroorotate dehydrogenase B, catalytic subunit (dihydroorotate
oxidase b) (dhodehase b) (dhodase b) (dhod b)
[Streptococcus pneumoniae CDC0288-04]
gi|353859574|gb|EHE39524.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47439]
Length = 312
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 160/336 (47%), Gaps = 35/336 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLNLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKA--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYF 377
+ Y + E L M + SS+E+ R E+
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLEELRQEVKEFL 311
>gi|315038743|ref|YP_004032311.1| dihydroorotate dehydrogenase 1B [Lactobacillus amylovorus GRL 1112]
gi|325957179|ref|YP_004292591.1| dihydroorotate dehydrogenase 1B [Lactobacillus acidophilus 30SC]
gi|385817946|ref|YP_005854336.1| dihydroorotate dehydrogenase 1B [Lactobacillus amylovorus GRL1118]
gi|312276876|gb|ADQ59516.1| dihydroorotate dehydrogenase 1B [Lactobacillus amylovorus GRL 1112]
gi|325333744|gb|ADZ07652.1| dihydroorotate dehydrogenase 1B [Lactobacillus acidophilus 30SC]
gi|327183884|gb|AEA32331.1| dihydroorotate dehydrogenase 1B [Lactobacillus amylovorus GRL1118]
Length = 307
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 163/327 (49%), Gaps = 34/327 (10%)
Query: 49 ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARL 107
+++ GL + NP + SG G + FD GA+V KT + A N P+ A L
Sbjct: 6 VSLPGLDLKNPVMPASGTFGFGDVPAAKKFDLNELGAMVIKTTT-PHATTGNPQPQIAVL 64
Query: 108 RAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
G S +G N ++++ L + K+ YPD ++AS+ + ++ +
Sbjct: 65 DDGVLNS-----VGLTNPGVDVVISEKLVPLRKQ-------YPDLPIMASVGGD-SEDDY 111
Query: 166 EELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
E+ ++ ++G ++A+E+N SCP+ + G + G ++EE+ I VP++ K
Sbjct: 112 VEVAKKLSDSGLVNALEINVSCPN---VDRGGMSFGVHPDVVEELTQKIKNVVNVPIYVK 168
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN+TD+ A+ A + G++G+S INT++ M ID+KT +P V G++ GG S +AV
Sbjct: 169 LTPNVTDVVTIAKAAEKGGADGLSMINTLLG-MDIDVKTRKP---VLGHNM-GGLSGEAV 223
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
P+AL +M+ + + G+GG+ + D +F+L GA+ V V T H
Sbjct: 224 KPVAL-------RMIAQVHQSVNLPIIGMGGISSAEDVVKFMLAGASAVAVGTA-HFHDS 275
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRG 371
K + + L +K I D G
Sbjct: 276 IASKHIADSLPVELKKLGVDDINDLVG 302
>gi|111658035|ref|ZP_01408737.1| hypothetical protein SpneT_02000768 [Streptococcus pneumoniae
TIGR4]
Length = 319
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 13 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 71
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 72 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 119
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 120 -AAVSHGISKA--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 175
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 176 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 230
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 231 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 283
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 284 NPYA-CPDIIENLPKVMDKYGISSLEELR 311
>gi|414158302|ref|ZP_11414596.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
sp. F0441]
gi|410870847|gb|EKS18804.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
sp. F0441]
Length = 312
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 158/332 (47%), Gaps = 41/332 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N L E +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQNPGL------EAVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
AA I + + AIE+N SCP HG G +GQD L EV +
Sbjct: 113 -AAVSRGISKA--ANVKAIELNISCPNVDHG----NHGLLIGQDPDLAYEVVKAAVEASD 165
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VPV+ K+TP++TDI A+ A +G+ G++ INT++ M +LKT +P + T GG
Sbjct: 166 VPVYVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFNLKTRKP---ILANGT-GG 220
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 221 MSGPAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTA 273
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+ED R
Sbjct: 274 NFTNPYA-CPDIIENLPKVMDKYGISSLEDLR 304
>gi|335046855|ref|ZP_08539878.1| dihydroorotate oxidase, catalytic subunit [Oribacterium sp. oral
taxon 108 str. F0425]
gi|333760641|gb|EGL38198.1| dihydroorotate oxidase, catalytic subunit [Oribacterium sp. oral
taxon 108 str. F0425]
Length = 302
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 154/321 (47%), Gaps = 58/321 (18%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVI----NVTP 102
+ T++G+++ NP + P + F + + ++S V N P
Sbjct: 4 IKTTLSGIELDNPII-----PASGTFAFGEEFKSLYDLNILGSISFKGTTVEERPGNALP 58
Query: 103 RYARLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASI---- 156
R A G S +G +N ++ + + L + K FK K L+A+I
Sbjct: 59 RIAECPGGMLNS-----VGLQNPGVKKVVEEELPRLGKFFK--------KPLVANISGFS 105
Query: 157 MEEYNKAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWI 213
+E++ A E +D+VE GI +EVN SCP HG G A G D + +E VC +
Sbjct: 106 LEDF--AILSEEMDKVENVGI--LEVNISCPNVSHG------GMAFGTDAKSVEAVCKVV 155
Query: 214 NAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGY 273
K PV+ K++PN+TDITE AR A G++G+S INT++ M ID+K +P
Sbjct: 156 KEKTKKPVYMKLSPNVTDITEMARAAESGGADGLSLINTVLG-MRIDIKRRKPVLA---- 210
Query: 274 STPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTV 333
+ GGYS + PIA+ V ++ + +K L G+GG+ D E ++ GA+ V
Sbjct: 211 NKVGGYSGPGIFPIAVRAVYAVHQAVK-------LPLIGMGGISRAEDVLEMMMAGASAV 263
Query: 334 QVCTGVMMHGYGLVKRLCEEL 354
+V +++ R+CEE+
Sbjct: 264 EVGAENLVN-----PRVCEEI 279
>gi|282164223|ref|YP_003356608.1| dihydroorotate dehydrogenase [Methanocella paludicola SANAE]
gi|282156537|dbj|BAI61625.1| dihydroorotate dehydrogenase [Methanocella paludicola SANAE]
Length = 315
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 152/327 (46%), Gaps = 38/327 (11%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L++ GL + NP ++ +G GT +KR G GAVV K++ + K + P R
Sbjct: 12 LTVEAGGLTLTNPTILAAGILGTTGASLKRVASMGAGAVVTKSIGAEP-KYGHPNPSMIR 70
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLK-ALYPDKILIASIMEEYNKAAW 165
L G + N + + + L E + K + P +IASI A
Sbjct: 71 LECG-----------YINAMGLPNPSYKEFLPELETAKDSGVP---VIASIF----GATE 112
Query: 166 EELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
E I+ + G A E+N SCPH R G VG D L++ + + PVW K
Sbjct: 113 AEFIEVAKGLPGASAYELNVSCPH---ARGYGMQVGTDPALVKAIAHAVKGTVNAPVWVK 169
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TPN+TDIT R A G++ V AINT+ ++ ID+ + P + G + GG S A+
Sbjct: 170 LTPNVTDITSIGRAAQEGGADAVVAINTLKAI-AIDIDSGYP---ILG-NIQGGLSGPAI 224
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
P+A+ V + ++ D + G GGV + DA EFI+ GA V++ + V
Sbjct: 225 KPVAVRCVYDL-------YSALDIPVIGAGGVSSWADAVEFIMAGAAAVEIGSAV-YDDI 276
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRG 371
G+ + L D++ N +++D G
Sbjct: 277 GVFAAVSMGLSDYLDRKNM-TLKDLTG 302
>gi|417934154|ref|ZP_12577474.1| dihydroorotate dehydrogenase 1B [Streptococcus mitis bv. 2 str.
F0392]
gi|340770724|gb|EGR93239.1| dihydroorotate dehydrogenase 1B [Streptococcus mitis bv. 2 str.
F0392]
Length = 312
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 158/332 (47%), Gaps = 41/332 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N L E +L E L+ YP +IA+++ +EY
Sbjct: 65 TPAGMLNA-----IGLQNPGL------EAVLSEKLPWLEREYPTLPIIANVVGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
AA I + + AIE+N SCP HG G +GQD L EV +
Sbjct: 113 -AAVSRGISKAAN--VKAIELNISCPNVDHG----NHGLLIGQDPDLAYEVVKAAVEASH 165
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VPV+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG
Sbjct: 166 VPVYVKLTPSVTDIVTIAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GG 220
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 221 MSGPAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAKAALEMYLAGASAIGVGTA 273
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 274 NFTNPYA-CPDIIENLPKVMDKYGISSLENLR 304
>gi|83590953|ref|YP_430962.1| dihydroorotate oxidase B, catalytic subunit [Moorella thermoacetica
ATCC 39073]
gi|83573867|gb|ABC20419.1| dihydroorotate oxidase B, catalytic subunit [Moorella thermoacetica
ATCC 39073]
Length = 352
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 159/347 (45%), Gaps = 43/347 (12%)
Query: 36 LASDSASAEPD------LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKT 89
L S S EP+ L + + L +PNP + SG G GA+V KT
Sbjct: 36 LKSRSTPQEPETGAGVNLEVQLGDLTLPNPVMPASGTFGFGEEYAPFLDLNRLGALVVKT 95
Query: 90 VSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYP 148
++L+ N PR +G S IG +N L E L+E L+ P
Sbjct: 96 ITLEPTPG-NPPPRLMETPSGLLNS-----IGLQNPGL------EVFLREKLPYLRRFTP 143
Query: 149 DKI--LIASIMEEYNKAAWEELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRL 205
I + +EEY EL R+ GI A+EVN SCP+ R+ G G +
Sbjct: 144 PLIVNIAGRTVEEYG-----ELAARLSAAEGIAALEVNISCPN---VREGGIVFGTVPEM 195
Query: 206 LEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLR 265
V + + +PV K+TPN+TDIT AR +G++ +S INT+ M IDL+T R
Sbjct: 196 AARVTATVKGQTHLPVIVKLTPNVTDITVLARAVEDAGADALSLINTLQG-MAIDLETRR 254
Query: 266 PEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEF 325
P + GG S A+ P+AL V +A+ +K + G+GG+ T DA EF
Sbjct: 255 PALA----NIVGGLSGPAIKPVALCAVWRVARAVK-------IPVIGMGGIVTARDALEF 303
Query: 326 ILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
+L GA V V T +++ +++ + + +K +++ + + GA
Sbjct: 304 LLAGARAVAVGTAGLVNPRAIIE-VIDGIKAYLQEQGLQDVNELVGA 349
>gi|325663471|ref|ZP_08151881.1| dihydroorotate dehydrogenase [Lachnospiraceae bacterium 4_1_37FAA]
gi|331087003|ref|ZP_08336078.1| dihydroorotate dehydrogenase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325470370|gb|EGC73601.1| dihydroorotate dehydrogenase [Lachnospiraceae bacterium 4_1_37FAA]
gi|330409453|gb|EGG88896.1| dihydroorotate dehydrogenase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 300
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 157/328 (47%), Gaps = 34/328 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+ + + G++ NP + SG G+ GAV K V+ + N TPR A
Sbjct: 2 DMRVNIAGVEWKNPVTVASGTFGSGAEFCDFVDLSKLGAVTTKGVA-NIPWEGNPTPRVA 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
G + +G +N I+L +R + + + D +I ++ +K
Sbjct: 61 ETYGGMMNA-----VGLQNPGIDLFCERDIPFLRQH---------DTKIIVNVCGR-SKE 105
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E+++R+ +D +E+N SCP+ ++ G A GQ+ + EE+ + A PV
Sbjct: 106 DYCEVVERLASEDVDMLEINISCPN---VKEGGIAFGQNPKAAEEITSAVKKYAKQPVIM 162
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+TDITE A+ G++ VS INT+ M ID+ + GG S A
Sbjct: 163 KLSPNVTDITEMAKAVEAGGADAVSLINTLTG-MKIDVH----RRAFALANKTGGVSGPA 217
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ PIA+ V +A N + + G+GG+ T DA EFIL GA+ V V T ++
Sbjct: 218 IKPIAVRMVYQVA-------NAVNIPIIGMGGIATAEDAIEFILAGASAVSVGTANFIN- 269
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
G+ + + ++ +MK + F +++D G
Sbjct: 270 PGVTAEIVDGIEAYMKKYQFETVKDMVG 297
>gi|259502158|ref|ZP_05745060.1| dihydroorotate dehydrogenase [Lactobacillus antri DSM 16041]
gi|259169776|gb|EEW54271.1| dihydroorotate dehydrogenase [Lactobacillus antri DSM 16041]
Length = 292
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 107/202 (52%), Gaps = 5/202 (2%)
Query: 184 FSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSG 243
SCP KMGA V +D L ++ + + +PV AK++PN++ + + L G
Sbjct: 1 MSCPQ-TSNAKMGAEVDEDPDLCRQLTEAVKRGSDLPVIAKISPNLSSMVPAVKGCLAGG 59
Query: 244 SEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEF 303
++G S I+T+ SV +DL+ P + G S G S KAV PIAL + ++S
Sbjct: 60 ADGFSLIDTVRSVTDVDLEKNVALPNINGKSAVSGLSGKAVKPIAL----HFLQELRSAA 115
Query: 304 NDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNF 363
+ ++GIGG+ET DAAE++L+GA TVQV T +M +GY +V L + FM+
Sbjct: 116 GLEKLQIAGIGGIETWEDAAEYLLMGATTVQVTTAIMQYGYRIVDDLKNGMMHFMEEKGV 175
Query: 364 SSIEDFRGASIEYFTTHTELVR 385
+ D G + + ++L R
Sbjct: 176 DHLSDLVGLANKNVVPTSQLDR 197
>gi|149019555|ref|ZP_01834874.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae SP23-BS72]
gi|418102684|ref|ZP_12739760.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae NP070]
gi|419475356|ref|ZP_14015197.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA14688]
gi|419486512|ref|ZP_14026278.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA44128]
gi|421206414|ref|ZP_15663475.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2090008]
gi|421208785|ref|ZP_15665807.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2070005]
gi|421224830|ref|ZP_15681574.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2070768]
gi|421227125|ref|ZP_15683834.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2072047]
gi|421229607|ref|ZP_15686280.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2061376]
gi|421240521|ref|ZP_15697068.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2080913]
gi|421291837|ref|ZP_15742575.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA56348]
gi|421311706|ref|ZP_15762313.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA58981]
gi|147930930|gb|EDK81910.1| dihydroorotate dehydrogenase [Streptococcus pneumoniae SP23-BS72]
gi|353776850|gb|EHD57325.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae NP070]
gi|379561694|gb|EHZ26711.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA14688]
gi|379588127|gb|EHZ52973.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA44128]
gi|395575741|gb|EJG36306.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2070005]
gi|395576328|gb|EJG36884.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2090008]
gi|395590618|gb|EJG50922.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2070768]
gi|395596364|gb|EJG56583.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2072047]
gi|395596419|gb|EJG56637.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2061376]
gi|395609103|gb|EJG69193.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2080913]
gi|395894054|gb|EJH05035.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA56348]
gi|395912284|gb|EJH23147.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA58981]
Length = 312
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKA--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 277 NPYA-CPVIIENLPKVMDKYGISSLEELR 304
>gi|408356923|ref|YP_006845454.1| dihydroorotate dehydrogenase catalytic subunit [Amphibacillus
xylanus NBRC 15112]
gi|407727694|dbj|BAM47692.1| dihydroorotate dehydrogenase catalytic subunit [Amphibacillus
xylanus NBRC 15112]
Length = 304
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 170/335 (50%), Gaps = 47/335 (14%)
Query: 46 DLSITVNGLQMPNPFVIGSG--PPGTNYTVMKRAFDEGW-GAVVAKTVSLDAAKVINVTP 102
DLS+ + GL + NP + SG G Y+ + +D GAVV K +L+ ++ N TP
Sbjct: 2 DLSVKLPGLNLKNPIMPASGCFSFGKEYS---QFYDLSLLGAVVIKAATLNE-RLGNPTP 57
Query: 103 RYARLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASI---- 156
R A +G + IG +N +E I D+ L LK++ D +IA++
Sbjct: 58 RVAETYSGMLNA-----IGLQNPGVETIIDQELP-YLKDY--------DVPVIANVAGST 103
Query: 157 MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK 216
+EEY + A + R + I AIE+N SCP+ ++ G G + + EV +
Sbjct: 104 VEEYEQVA--KAFRRTD--AISAIELNISCPN---VKEGGLQFGTNADVAAEVTRKVKQV 156
Query: 217 ATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTP 276
+ VPV+ K+TPN+T++ E A+ ++G++G++ IN++ M IDL+ RP +
Sbjct: 157 SQVPVYVKLTPNVTNVVEIAQAVEQAGADGLTMINSLTG-MQIDLQNRRPLLA----NKV 211
Query: 277 GGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336
GG + A+ P+A+ V + + +K + G+GG+ T D EF+L GA+ VQV
Sbjct: 212 GGLTGPAIKPVAIRMVYQVYQAVK-------IPIIGVGGIMTVEDVLEFLLAGASAVQVG 264
Query: 337 TGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
T + + L E+L + + F+S+E+ G
Sbjct: 265 TANFQNPM-ICPELIEQLPACLAKYGFTSVEEAIG 298
>gi|363898064|ref|ZP_09324600.1| hypothetical protein HMPREF9624_01162 [Oribacterium sp. ACB7]
gi|361957173|gb|EHL10484.1| hypothetical protein HMPREF9624_01162 [Oribacterium sp. ACB7]
Length = 302
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 154/321 (47%), Gaps = 58/321 (18%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVI----NVTP 102
+ T++G+++ NP + P + F + + ++S V N P
Sbjct: 4 IKTTLSGIELDNPII-----PASGTFAFGEEFKSLYDLNILGSISFKGTTVEERPGNALP 58
Query: 103 RYARLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASI---- 156
R A G S +G +N ++ + + L + K FK K L+A+I
Sbjct: 59 RIAECPGGMLNS-----VGLQNPGVKKVVEEELPRLGKFFK--------KPLVANISGFS 105
Query: 157 MEEYNKAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWI 213
+E++ A E +D+VE GI +EVN SCP HG G A G D + +E VC +
Sbjct: 106 LEDF--AILSEEMDKVENVGI--LEVNISCPNVSHG------GMAFGTDAKSVEAVCKVV 155
Query: 214 NAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGY 273
K PV+ K++PN+TDITE AR A G++G+S INT++ M ID+K +P
Sbjct: 156 KEKTKKPVYMKLSPNVTDITEMARAAESGGADGLSLINTVLG-MRIDIKRRKPVLA---- 210
Query: 274 STPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTV 333
+ GGYS + PIA+ V ++ + +K L G+GG+ D E ++ GA+ V
Sbjct: 211 NKVGGYSGPGIFPIAVRAVYAVHQAVK-------LPLIGMGGISRAEDVLEMMMAGASAV 263
Query: 334 QVCTGVMMHGYGLVKRLCEEL 354
+V +++ R+CEE+
Sbjct: 264 EVGAENLVN-----PRVCEEI 279
>gi|218131105|ref|ZP_03459909.1| hypothetical protein BACEGG_02710 [Bacteroides eggerthii DSM 20697]
gi|317477012|ref|ZP_07936254.1| dihydroorotate dehydrogenase [Bacteroides eggerthii 1_2_48FAA]
gi|217986809|gb|EEC53142.1| dihydroorotate oxidase [Bacteroides eggerthii DSM 20697]
gi|316906805|gb|EFV28517.1| dihydroorotate dehydrogenase [Bacteroides eggerthii 1_2_48FAA]
Length = 303
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 161/330 (48%), Gaps = 35/330 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ + LQM NP + SG G G ++ K +L + N PR A
Sbjct: 3 DLSVNIGELQMKNPVMTASGTFGYGEEFADFIDISRIGGIIVKGTTLHKREG-NPYPRMA 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKIL--IASIMEEYNK 162
+G + +G +N + + ++ + ++K + + I+ S +E+Y K
Sbjct: 62 ETPSGMLNA-----VGLQN------KGVHYFVEHIYPRIKDIRTNMIVNVSGSAIEDYVK 110
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
A E+I+ + I AIE+N SCP+ ++ G A G + EEV + + +
Sbjct: 111 TA--EIINDL--VNIPAIELNISCPN---VKQGGMAFGVTAKGAEEVVKAVRSVYKKTLI 163
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
K++PN+TDITE AR A G++ VS INT++ M +D + RP + GG S
Sbjct: 164 VKLSPNVTDITEIARAAENGGADSVSLINTLLG-MAVDAERKRPILS----TVTGGMSGA 218
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
AV PIAL V +AK +K + G+GG+ DA EF+L GA+ +Q+ T +
Sbjct: 219 AVKPIALRMVWQVAKAVK-------IPVIGLGGIMNWKDAVEFMLAGASAIQIGTANFID 271
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
VK + E + D++ HN+ S+++ GA
Sbjct: 272 PAITVK-VAEGIDDYLNRHNYKSVKEIIGA 300
>gi|160938652|ref|ZP_02086004.1| hypothetical protein CLOBOL_03547 [Clostridium bolteae ATCC
BAA-613]
gi|158438351|gb|EDP16110.1| hypothetical protein CLOBOL_03547 [Clostridium bolteae ATCC
BAA-613]
Length = 300
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 160/332 (48%), Gaps = 40/332 (12%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
++S+ + G++ NP + SG G+ + GAVV K V+ N TPR A
Sbjct: 2 NMSVNIAGVEFKNPVMEASGTFGSGMEYSEFVDLNRLGAVVTKGVA-SVPWPGNPTPRIA 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ G + IG +N I++ + R + LK++ D ++ ++ +
Sbjct: 61 EVYGGMLNA-----IGLQNPGIDVFTKRDIP-FLKQY--------DTKIVVNVCGK---- 102
Query: 164 AWEELIDRVEETG---IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
EE ID VE G +D +E+N SCP+ ++ G A GQD + +E + + A A P
Sbjct: 103 TTEEYIDVVERLGDQPVDMLEINISCPN---VKEGGIAFGQDPKAVEAITREVKAHARQP 159
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
+ K++PN+TDIT AR A G++ +S INT+ M ID+ + + GG S
Sbjct: 160 IIMKLSPNVTDITVMARAAEAGGADAISLINTLTG-MKIDIH----KRAFALANRTGGLS 214
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
AV P+A+ V +A+ +K + G+GG+ DA EFIL GA V + T
Sbjct: 215 GPAVKPVAVRMVYQVAQAVK-------VPIIGMGGIRNADDALEFILAGATAVAIGTANF 267
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
+ Y V+ + + ++ +M+ + I D GA
Sbjct: 268 HNPYATVETV-DGIRAYMETYGIGDIRDLIGA 298
>gi|312868958|ref|ZP_07729138.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus oris
PB013-T2-3]
gi|311095522|gb|EFQ53786.1| dihydroorotate oxidase, catalytic subunit [Lactobacillus oris
PB013-T2-3]
Length = 308
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 157/326 (48%), Gaps = 32/326 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L++ + GL + NP + SG G V K G++V K+ +L A + N PR
Sbjct: 7 LAVDLPGLALKNPIIPASGTCGYGQQVAKNYDLNLLGSLVLKSTTLHA-RAGNPQPRVCE 65
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIMEEYNKAAW 165
AG W N + + ++ +++E L YPD +IAS ++ A +
Sbjct: 66 TSAG-----------WLNANGLQNVGVDAVVREKLPWLHRHYPDLPVIAS-AAGFSTAEY 113
Query: 166 EELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT-VPVWA 223
E +++++ + AIE+N SCP+ + G A+G D +LE++ + +A P++
Sbjct: 114 ETVVEQLAAAPTVSAIELNVSCPN---VKHGGLAMGTDPAVLEDLTRKVVRRAKGKPIYV 170
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K+TPN+TDI A+ A R G+ G++ +NT+ + I+L+T RP + GG S A
Sbjct: 171 KLTPNVTDIVPLAQAAERGGANGLTMVNTLTG-LSINLRTRRPVLA----NVTGGLSGPA 225
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ P+AL +M+ + G+GG+E+ D EF++ GAN V+V H
Sbjct: 226 LKPMAL-------RMIHQVRAVSSLPIIGVGGIESAEDVLEFMMAGANAVEV-GAASFHD 277
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDF 369
R+ +L M + + + D
Sbjct: 278 PLACPRIAADLPLVMDRYGINKLTDL 303
>gi|363889253|ref|ZP_09316617.1| hypothetical protein HMPREF9628_01253 [Eubacteriaceae bacterium
CM5]
gi|361966855|gb|EHL19737.1| hypothetical protein HMPREF9628_01253 [Eubacteriaceae bacterium
CM5]
Length = 303
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 162/331 (48%), Gaps = 38/331 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEG-WGAVVAKTVSLDAAKVINVTPRY 104
D S+ ++GL + NP + SG G K +D G++ K ++D + N+ PR
Sbjct: 3 DTSVNLSGLVLDNPIIPASGTFGFGQE-YKDFYDINILGSISFKGTTVDM-RFGNMQPRI 60
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI----MEEY 160
A AG S Q G E + + +E L +Y K+ IA+I ++EY
Sbjct: 61 AECTAGLINSVGLQNPGLEKV----------ISEELPNLAKIYHKKV-IANISGFSIDEY 109
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
K A E ++ V+ GI IEVN SCP+ G A G + + EV + + P
Sbjct: 110 VKCA--EAMNEVDMVGI--IEVNVSCPN---VHNGGMAYGVCPKSVSEVTKAVKKVTSKP 162
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
V+ K++PN+TDITE A+ SG++G+S INT++ M ID++ + P + + GG+S
Sbjct: 163 VYIKLSPNVTDITEIAKACEHSGADGISMINTLLG-MRIDIR--KKAPVIA--NKMGGFS 217
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
A+ PIAL V +A +K + G+GGV + D E ++ GA VQ+ +
Sbjct: 218 GPAIFPIALRMVYQVANAVK-------IPIIGMGGVSSTSDVIEMMMAGATAVQIGAANL 270
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
++ + + K + + L M+ N + D G
Sbjct: 271 VNPF-ICKEIIDSLPSKMQELNIEKLSDIIG 300
>gi|334365254|ref|ZP_08514215.1| dihydroorotate oxidase, catalytic subunit [Alistipes sp. HGB5]
gi|313158558|gb|EFR57952.1| dihydroorotate oxidase, catalytic subunit [Alistipes sp. HGB5]
Length = 319
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 155/335 (46%), Gaps = 44/335 (13%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAA----KVINV 100
PD+S+T++GL++ NP V SG G F + + + + S + N
Sbjct: 18 PDMSVTLSGLKLDNPVVPASGTFGYG-----NEFRDFYDINILGSFSFKGTTREPRFGNP 72
Query: 101 TPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI---- 156
TPR A AG + Q G + + + +E +LK+ + K +IA+I
Sbjct: 73 TPRIAECEAGMINAVGLQNPGIDAV----------IAEELPRLKSFF-HKPVIANISGFS 121
Query: 157 MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK 216
+EEY A E IDR E+ GI IEVN SCP+ R G + G EV +
Sbjct: 122 IEEY--AYCCERIDREEQVGI--IEVNVSCPN---VRHGGMSFGTSPECAAEVTRAVKTV 174
Query: 217 ATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTP 276
T PV+ K++PN+TDI AR +G++G+ INT++ M ID++ + +T
Sbjct: 175 TTKPVYIKLSPNVTDIVSIARACEEAGADGICLINTLLG-MRIDVRCRK----AVIANTM 229
Query: 277 GGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336
GG+S AV P+A+ V +AK + G GGV T D E ++ GA VQV
Sbjct: 230 GGFSGAAVFPVAVRMVYQVAKAC-------SVPVMGCGGVTTARDVIEMMMAGATAVQVG 282
Query: 337 TGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+++ Y K + E L M+ + D G
Sbjct: 283 AANLVNPYA-SKEIVEALPAEMERLGIERLSDIIG 316
>gi|289167808|ref|YP_003446077.1| dihydroorotate dehydrogenase [Streptococcus mitis B6]
gi|288907375|emb|CBJ22212.1| dihydroorotate dehydrogenase [Streptococcus mitis B6]
Length = 312
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 160/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKA--ANVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASDVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M +LKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFNLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L + M + SS+E+FR
Sbjct: 277 NPYA-CPDIIENLPNVMDKYGISSLENFR 304
>gi|222529371|ref|YP_002573253.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor
bescii DSM 6725]
gi|254788873|sp|B9MS26.1|PYRDB_ANATD RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|222456218|gb|ACM60480.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor
bescii DSM 6725]
Length = 300
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 162/329 (49%), Gaps = 35/329 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+L + + G+++ NP + SG G K +GA+ K ++L ++ N PR
Sbjct: 2 NLEVEIAGIKLKNPVIAASGTFGFGREYSKLIDISEFGAICTKGITLKK-RIGNPQPRLC 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ AG S +G EN +E + L LK F D +IA+I ++K
Sbjct: 61 EVYAGIINS-----VGLENPGVEAFINDEL-PFLKSF--------DTKIIANI-NGFSKE 105
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ EL ++ + +D IEVN SCP+ ++ G G+D + + E+ + A+ P+
Sbjct: 106 EFVEL-TKILTSLVDMIEVNLSCPN---VKEGGMVFGKDPKKVYEITKSVKDVASCPIIV 161
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K+TPN+TDIT+ A A +G++ +S INT+ S M ID++T +P + GG S A
Sbjct: 162 KLTPNVTDITQLAVAAENAGADAISLINTV-SAMAIDIETRKPLIKM----VTGGLSGPA 216
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ PIA+ +M+ F + G+GG+ DA EF + GA +Q+ T V
Sbjct: 217 IKPIAV-------RMVYECFKKVRIPIIGMGGIMNYKDAIEFFIAGATAIQIGT-VNFIN 268
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
V + E ++ +++ F SI++ G+
Sbjct: 269 PKAVCEIKEGIEAYLERKGFKSIKELVGS 297
>gi|307704694|ref|ZP_07641593.1| dihydroorotate dehydrogenase [Streptococcus mitis SK597]
gi|307621741|gb|EFO00779.1| dihydroorotate dehydrogenase [Streptococcus mitis SK597]
Length = 312
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 157/329 (47%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEYA 113
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
++ + + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 114 AVSY----GISKAANVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASDVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+ED R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLEDLR 304
>gi|307706462|ref|ZP_07643271.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
mitis SK321]
gi|307618172|gb|EFN97330.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
mitis SK321]
Length = 312
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKA--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASDVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVLPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLENLR 304
>gi|421236110|ref|ZP_15692711.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2071004]
gi|395605029|gb|EJG65161.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2071004]
Length = 312
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 158/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKA--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGAAAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLEELR 304
>gi|344996046|ref|YP_004798389.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964265|gb|AEM73412.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor
lactoaceticus 6A]
Length = 300
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 161/330 (48%), Gaps = 39/330 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+L + + G+++ NP + SG G K +GA+ K ++L ++ N PR
Sbjct: 2 NLEVEIAGVKLKNPVIAASGTFGFGREYSKLIDISEFGAICTKGITLKK-RIGNPQPRLC 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ AG S +G EN +E + L + LK F D +IA+I N
Sbjct: 61 EVYAGIINS-----VGLENPGVEAFINEEL-SFLKGF--------DTKIIANI----NGF 102
Query: 164 AWEELID--RVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
A EE ++ ++ + +D IEVN SCP+ ++ G G+D + E+ + A+ P+
Sbjct: 103 AKEEFVELTKILTSLVDMIEVNLSCPN---VKEGGMVFGKDPEKVYEITKSVKDVASCPI 159
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
K+TPN+TDIT+ A A +G++ +S INT+ S M ID++T +P GG S
Sbjct: 160 IVKLTPNVTDITQLAVAAENAGADAISLINTV-SAMAIDIETRKPLI----KMVTGGLSG 214
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
A+ PIA+ +M+ F + G+GG+ DA EF + GA +Q+ T V
Sbjct: 215 PAIKPIAV-------RMVLECFKKVRIPIIGMGGIMNYKDAIEFFIAGATAIQIGT-VNF 266
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
V + E ++ +++ F+SI++ G
Sbjct: 267 INPKAVCEIKEGIEAYLERKGFNSIKELVG 296
>gi|148992901|ref|ZP_01822520.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae SP9-BS68]
gi|168490217|ref|ZP_02714416.1| dihydroorotate dehydrogenase B, catalytic subunit (dihydroorotate
oxidase b) (dhodehase b) (dhodase b) (dhod b)
[Streptococcus pneumoniae SP195]
gi|169833969|ref|YP_001694409.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae
Hungary19A-6]
gi|194398689|ref|YP_002037599.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae G54]
gi|225856622|ref|YP_002738133.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae P1031]
gi|225858757|ref|YP_002740267.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae 70585]
gi|387626317|ref|YP_006062492.1| dihydroorotate dehydrogenase, catalytic subunit [Streptococcus
pneumoniae INV104]
gi|405761087|ref|YP_006701683.1| dihydroorotate dehydrogenase, catalytic subunit [Streptococcus
pneumoniae SPNA45]
gi|417678918|ref|ZP_12328315.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA17570]
gi|417693884|ref|ZP_12343073.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47901]
gi|418121033|ref|ZP_12757979.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA44194]
gi|418125590|ref|ZP_12762500.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA44511]
gi|418175781|ref|ZP_12812378.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA41437]
gi|418189200|ref|ZP_12825715.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47373]
gi|418191511|ref|ZP_12828015.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47388]
gi|418214138|ref|ZP_12840873.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA54644]
gi|418218709|ref|ZP_12845376.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae NP127]
gi|418234162|ref|ZP_12860741.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA08780]
gi|419462125|ref|ZP_14002035.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA02714]
gi|419484170|ref|ZP_14023946.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA43257]
gi|419490880|ref|ZP_14030620.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47179]
gi|419508035|ref|ZP_14047688.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA49542]
gi|419532190|ref|ZP_14071707.1| dihydroorotate dehydrogenase family domain protein [Streptococcus
pneumoniae GA47794]
gi|421220113|ref|ZP_15676963.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2070425]
gi|421222441|ref|ZP_15679232.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2070531]
gi|421278740|ref|ZP_15729548.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Streptococcus pneumoniae GA17301]
gi|421289595|ref|ZP_15740346.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA54354]
gi|421300832|ref|ZP_15751502.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA19998]
gi|147928353|gb|EDK79369.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae SP9-BS68]
gi|168996471|gb|ACA37083.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae Hungary19A-6]
gi|183571422|gb|EDT91950.1| dihydroorotate dehydrogenase B, catalytic subunit (dihydroorotate
oxidase b) (dhodehase b) (dhodase b) (dhod b)
[Streptococcus pneumoniae SP195]
gi|194358356|gb|ACF56804.1| dihydroorotate dehydrogenase B [Streptococcus pneumoniae G54]
gi|225721785|gb|ACO17639.1| dihydroorotate dehydrogenase B, catalytic subunit (dihydroorotate
oxidase b) (dhodehase b) (dhodase b) (dhod b)
[Streptococcus pneumoniae 70585]
gi|225725581|gb|ACO21433.1| dihydroorotate dehydrogenase B, catalytic subunit (dihydroorotate
oxidase b) (dhodehase b) (dhodase b) (dhod b)
[Streptococcus pneumoniae P1031]
gi|301794102|emb|CBW36508.1| dihydroorotate dehydrogenase, catalytic subunit [Streptococcus
pneumoniae INV104]
gi|332073297|gb|EGI83776.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA17570]
gi|332204967|gb|EGJ19032.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47901]
gi|353793860|gb|EHD74219.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA44194]
gi|353797556|gb|EHD77889.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA44511]
gi|353842349|gb|EHE22396.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA41437]
gi|353856342|gb|EHE36311.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47373]
gi|353857412|gb|EHE37375.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47388]
gi|353871421|gb|EHE51292.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA54644]
gi|353875364|gb|EHE55216.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae NP127]
gi|353888407|gb|EHE68181.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA08780]
gi|379532971|gb|EHY98194.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA02714]
gi|379583681|gb|EHZ48558.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA43257]
gi|379594459|gb|EHZ59269.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47179]
gi|379606360|gb|EHZ71108.1| dihydroorotate dehydrogenase family domain protein [Streptococcus
pneumoniae GA47794]
gi|379611753|gb|EHZ76475.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA49542]
gi|395588390|gb|EJG48720.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2070425]
gi|395588609|gb|EJG48937.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2070531]
gi|395880173|gb|EJG91226.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Streptococcus pneumoniae GA17301]
gi|395888836|gb|EJG99846.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA54354]
gi|395898392|gb|EJH09336.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA19998]
gi|404277976|emb|CCM08547.1| dihydroorotate dehydrogenase, catalytic subunit [Streptococcus
pneumoniae SPNA45]
Length = 312
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 158/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLNLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKA--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLEELR 304
>gi|256830609|ref|YP_003159337.1| dihydroorotate dehydrogenase family protein [Desulfomicrobium
baculatum DSM 4028]
gi|256579785|gb|ACU90921.1| dihydroorotate dehydrogenase family protein [Desulfomicrobium
baculatum DSM 4028]
Length = 302
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 156/332 (46%), Gaps = 41/332 (12%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL++ + L + NP + SG G ++ G + K +SL A + N PR A
Sbjct: 2 DLTVKLGPLTLRNPIITASGTFGYGLEFLRYGDLSALGGICLKGISL-APRTGNPMPRIA 60
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
G + IG +N+ + E LKE +L + LIA++ + +
Sbjct: 61 ETPCGMLNA-----IGLQNVGV------EKFLKE--KLPYIPAGATLIANLYAQTPEDFG 107
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TVPVWAK 224
E E I A+EVN SCP+ R+ G GQD + V G + +A + PV K
Sbjct: 108 ELAAIFSGEDKIAALEVNISCPN---VREGGVQFGQDPHMASAVVGAVKKRAGSKPVIVK 164
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
++PN+TD+ AR A+ +G++ +S INT +S M +D++T + + GG S A+
Sbjct: 165 LSPNVTDVRVIARAAVDAGADMLSLINT-LSGMAVDIRTRKSRLA----NVVGGLSGPAI 219
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
P+AL +M+ + + G+GG+ + D EFIL+GA+ VQV T Y
Sbjct: 220 KPVAL-------RMVHQVVQSVNVPVIGMGGIVSAEDVLEFILVGAHAVQVGT------Y 266
Query: 345 GLVK-----RLCEELKDFMKMHNFSSIEDFRG 371
++ RL EE++ + S D+RG
Sbjct: 267 NFMRPDNAFRLVEEVRVLAETLGIESWGDYRG 298
>gi|410476405|ref|YP_006743164.1| dihydroorotate dehydrogenase B [Streptococcus pneumoniae
gamPNI0373]
gi|444388424|ref|ZP_21186409.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae
PCS125219]
gi|444389903|ref|ZP_21187818.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PCS70012]
gi|444392761|ref|ZP_21190458.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PCS81218]
gi|444395864|ref|ZP_21193403.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0002]
gi|444397423|ref|ZP_21194906.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0006]
gi|444400603|ref|ZP_21197990.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0007]
gi|444401924|ref|ZP_21199103.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0008]
gi|444406218|ref|ZP_21203002.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0009]
gi|444408638|ref|ZP_21205271.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0010]
gi|444409457|ref|ZP_21206049.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0076]
gi|444411681|ref|ZP_21208009.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0153]
gi|444414293|ref|ZP_21210576.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0199]
gi|444418576|ref|ZP_21214550.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0360]
gi|444421148|ref|ZP_21216900.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0427]
gi|444422367|ref|ZP_21218024.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0446]
gi|406369350|gb|AFS43040.1| dihydroorotate dehydrogenase B [Streptococcus pneumoniae
gamPNI0373]
gi|444249481|gb|ELU55971.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae
PCS125219]
gi|444255865|gb|ELU62205.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0002]
gi|444256366|gb|ELU62704.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PCS70012]
gi|444260080|gb|ELU66388.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0006]
gi|444262918|gb|ELU69167.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PCS81218]
gi|444265869|gb|ELU71854.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0007]
gi|444267395|gb|ELU73300.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0008]
gi|444269323|gb|ELU75132.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0009]
gi|444269465|gb|ELU75272.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0010]
gi|444275578|gb|ELU81200.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0153]
gi|444279495|gb|ELU84891.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0076]
gi|444281172|gb|ELU86502.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0360]
gi|444282666|gb|ELU87915.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0199]
gi|444283049|gb|ELU88261.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0427]
gi|444288297|gb|ELU93194.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae PNI0446]
Length = 328
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 158/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K G+++ K +L+ + N TPR A
Sbjct: 22 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLNLLGSIMIKATTLEP-RFGNPTPRVAE 80
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 81 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 128
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 129 -AAVSHGISKA--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 184
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 185 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 239
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 240 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 292
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 293 NPYA-CPDIIENLPKVMDKYGISSLEELR 320
>gi|149006359|ref|ZP_01830071.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae
SP18-BS74]
gi|225861149|ref|YP_002742658.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae
Taiwan19F-14]
gi|307127485|ref|YP_003879516.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 670-6B]
gi|387788364|ref|YP_006253432.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae ST556]
gi|417312534|ref|ZP_12099246.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA04375]
gi|417676720|ref|ZP_12326131.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA17545]
gi|417696155|ref|ZP_12345334.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47368]
gi|418085030|ref|ZP_12722214.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47281]
gi|418091708|ref|ZP_12728850.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA44452]
gi|418093792|ref|ZP_12730921.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA49138]
gi|418096077|ref|ZP_12733192.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA16531]
gi|418107357|ref|ZP_12744395.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA41410]
gi|418109930|ref|ZP_12746955.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA49447]
gi|418112319|ref|ZP_12749321.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA41538]
gi|418118746|ref|ZP_12755703.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA18523]
gi|418132806|ref|ZP_12769679.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA11304]
gi|418141551|ref|ZP_12778364.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA13455]
gi|418150429|ref|ZP_12787180.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA14798]
gi|418152695|ref|ZP_12789435.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA16121]
gi|418155001|ref|ZP_12791732.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA16242]
gi|418157569|ref|ZP_12794285.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA16833]
gi|418164824|ref|ZP_12801494.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA17371]
gi|418169066|ref|ZP_12805710.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA19077]
gi|418225389|ref|ZP_12852018.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae NP112]
gi|418227545|ref|ZP_12854164.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 3063-00]
gi|419422812|ref|ZP_13963028.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA43264]
gi|419429122|ref|ZP_13969289.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA11856]
gi|419438062|ref|ZP_13978132.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA13499]
gi|419466407|ref|ZP_14006290.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA05248]
gi|419488845|ref|ZP_14028595.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA44386]
gi|419501691|ref|ZP_14041377.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47628]
gi|419512360|ref|ZP_14051994.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Streptococcus pneumoniae GA05578]
gi|419516640|ref|ZP_14056258.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Streptococcus pneumoniae GA02506]
gi|419518754|ref|ZP_14058361.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Streptococcus pneumoniae GA08825]
gi|419525712|ref|ZP_14065276.1| dihydroorotate dehydrogenase family domain protein [Streptococcus
pneumoniae GA14373]
gi|419527645|ref|ZP_14067188.1| dihydroorotate dehydrogenase family domain protein [Streptococcus
pneumoniae GA17719]
gi|421272618|ref|ZP_15723462.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Streptococcus pneumoniae SPAR55]
gi|421283154|ref|ZP_15733941.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA04216]
gi|421298431|ref|ZP_15749119.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA60080]
gi|147762136|gb|EDK69098.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae
SP18-BS74]
gi|225728081|gb|ACO23932.1| dihydroorotate dehydrogenase B, catalytic subunit (dihydroorotate
oxidase b) (dhodehase b) (dhodase b) (dhod b)
[Streptococcus pneumoniae Taiwan19F-14]
gi|306484547|gb|ADM91416.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 670-6B]
gi|327389242|gb|EGE87587.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA04375]
gi|332075580|gb|EGI86048.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA17545]
gi|332201430|gb|EGJ15500.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47368]
gi|353758725|gb|EHD39313.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47281]
gi|353763808|gb|EHD44358.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA44452]
gi|353765668|gb|EHD46210.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA49138]
gi|353771064|gb|EHD51575.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA16531]
gi|353779540|gb|EHD60004.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA41410]
gi|353782842|gb|EHD63272.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA49447]
gi|353784185|gb|EHD64606.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA41538]
gi|353790698|gb|EHD71079.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA18523]
gi|353805802|gb|EHD86076.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA13455]
gi|353806762|gb|EHD87035.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA11304]
gi|353815937|gb|EHD96149.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA14798]
gi|353819340|gb|EHD99538.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA16121]
gi|353823293|gb|EHE03468.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA16242]
gi|353824017|gb|EHE04191.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA16833]
gi|353829685|gb|EHE09816.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA17371]
gi|353834908|gb|EHE15004.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA19077]
gi|353882697|gb|EHE62508.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae NP112]
gi|353883146|gb|EHE62955.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 3063-00]
gi|379138106|gb|AFC94897.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae ST556]
gi|379538067|gb|EHZ03248.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA13499]
gi|379544530|gb|EHZ09674.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA05248]
gi|379551070|gb|EHZ16165.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA11856]
gi|379559186|gb|EHZ24216.1| dihydroorotate dehydrogenase family domain protein [Streptococcus
pneumoniae GA14373]
gi|379565798|gb|EHZ30789.1| dihydroorotate dehydrogenase family domain protein [Streptococcus
pneumoniae GA17719]
gi|379587738|gb|EHZ52585.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA44386]
gi|379588270|gb|EHZ53115.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA43264]
gi|379602052|gb|EHZ66824.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae GA47628]
gi|379636830|gb|EIA01388.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Streptococcus pneumoniae GA05578]
gi|379640643|gb|EIA05182.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Streptococcus pneumoniae GA02506]
gi|379641733|gb|EIA06268.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Streptococcus pneumoniae GA08825]
gi|395875727|gb|EJG86805.1| dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
[Streptococcus pneumoniae SPAR55]
gi|395881117|gb|EJG92166.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA04216]
gi|395902387|gb|EJH13320.1| dihydroorotate dehydrogenase family protein [Streptococcus
pneumoniae GA60080]
Length = 312
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKA--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSTEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLEELR 304
>gi|295094684|emb|CBK83775.1| dihydroorotate dehydrogenase (subfamily 1) family protein
[Coprococcus sp. ART55/1]
Length = 304
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 163/330 (49%), Gaps = 38/330 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
++S+ + G+ + NP + SG G+ + GAV K V+ + N TPR A
Sbjct: 6 NMSVDIAGVTLKNPITVASGTFGSGMEYSEFVDLSQLGAVTTKGVA-NVPWPGNPTPRIA 64
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
G + IG +N I++ R + L+++ D +I ++ + +K
Sbjct: 65 ETYGGMMNA-----IGLQNPGIDVFKKRDIP-FLRDY--------DTKIIVNVCGK-SKE 109
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E ++++ + +D +E+N SCP+ ++ G A GQ L ++ + A A P+
Sbjct: 110 DYVECVEKLGDCDVDLLEINVSCPN---VKEGGIAFGQQPDALYDITKAVKAAAKQPIIM 166
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDL--KTLRPEPCVEGYSTPGGYSC 281
K++PN+TDITE AR A G++ VS INT+ M ID+ +T G S P
Sbjct: 167 KLSPNVTDITEMARAAEAGGADAVSLINTLTG-MKIDVNRRTFAVANKTAGVSGP----- 220
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
A+HPIA+ V +A +K + G+GGV T DA E I++GA+ V V T
Sbjct: 221 -AIHPIAVRMVYQVANAIK-------LPIIGMGGVATTEDALEMIMVGASAVAVGTANFH 272
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ Y V+ + + ++++MK ++ S I + G
Sbjct: 273 NPYATVE-IIKGIEEYMKKNSISDIHELIG 301
>gi|427382451|ref|ZP_18879171.1| dihydroorotate dehydrogenase [Bacteroides oleiciplenus YIT 12058]
gi|425729696|gb|EKU92547.1| dihydroorotate dehydrogenase [Bacteroides oleiciplenus YIT 12058]
Length = 303
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 162/332 (48%), Gaps = 39/332 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPG-----TNYTVMKRAFDEGWGAVVAKTVSLDAAKVINV 100
DLS+ + LQM NP + SG G +++ + R G ++ K +L + N
Sbjct: 3 DLSVNIGELQMKNPVMTASGTFGYGEEFSDFIDIAR-----IGGIIVKGTTLHKREG-NP 56
Query: 101 TPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
PR A AG + +G +N + D +E + K ++ + S +E+Y
Sbjct: 57 YPRMAETPAGMLNA-----VGLQNKGV--DYFVEHIYPRIKDIETNMIVNVS-GSAIEDY 108
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
K A E I+ +++ I AIE+N SCP+ ++ G A G + EEV + A
Sbjct: 109 VKTA--ETINALDK--IPAIELNISCPN---VKQGGMAFGVTAKGAEEVVKAVRAAYKKT 161
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
+ K++PN+TDITE AR G++ VS INT++ M ID + RP + GG S
Sbjct: 162 LIVKLSPNVTDITEIARAVENGGADSVSLINTLLG-MAIDAERRRPVLS----TITGGMS 216
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
AV PIAL V +AK +K + G+GG+ DA EF+L GA+ +Q+ T
Sbjct: 217 GAAVKPIALRMVWQVAKAIK-------IPVIGLGGIMNWKDAVEFMLAGASAIQIGTANF 269
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
+ +K + E + D++ H + S+++ GA
Sbjct: 270 IDPAVTIK-VAEGINDYLDRHGYKSMKEIIGA 300
>gi|307708598|ref|ZP_07645062.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
mitis NCTC 12261]
gi|307615347|gb|EFN94556.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
mitis NCTC 12261]
Length = 312
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+A + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEA-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + + AIE+N SCP+ + G +GQ+ L +V + VPV
Sbjct: 113 -AAVSHGISKA--ANVKAIELNISCPN-VDHCNHGLLIGQNPDLAYDVVKAAVEASDVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+ED R
Sbjct: 277 NPYA-CPDIIENLPKAMDKYGISSLEDLR 304
>gi|422422540|ref|ZP_16499493.1| dihydroorotate dehydrogenase [Listeria seeligeri FSL S4-171]
gi|313637312|gb|EFS02803.1| dihydroorotate dehydrogenase [Listeria seeligeri FSL S4-171]
Length = 304
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 162/332 (48%), Gaps = 45/332 (13%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L++ + GL + NP + SG G K GA++AK V+ + + N TPR A
Sbjct: 4 LAVEIPGLSLKNPIMPASGCFGFGQEYSKYYDLNELGAIMAKAVTPEPRRG-NPTPRVAE 62
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM----EEYNK 162
+G + Q G E++ L + P L++F D +IA++ E+Y K
Sbjct: 63 TASGMLNAIGLQNPGLEHV-LAHELPF---LEQF--------DTPIIANVAGATEEDYVK 110
Query: 163 AAWEELIDRV-EETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
R+ E + AIE+N SCP HG G A G D + + + A A+
Sbjct: 111 VCA-----RIGESKAVKAIELNISCPNVKHG------GIAFGTDPEVAHRLTKAVKAVAS 159
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VPV+ K++PN+ DI A+ +G++G++ INT++ M IDLKT +P + T GG
Sbjct: 160 VPVYVKLSPNVADIVSIAQAIESAGADGLTMINTLLG-MRIDLKTRKP---IIANGT-GG 214
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
+S A+ P+A+ +M+ + + G+GGV+T D EF++ GA+ V V T
Sbjct: 215 FSGPAIKPVAI-------RMIHQVRAVSNIPIIGMGGVQTVDDVLEFLIAGADAVAVGTM 267
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ + +L EL + M+ N SS++ +
Sbjct: 268 NFTDPF-ICPKLIAELPNRMEELNISSLQQLK 298
>gi|334143360|ref|YP_004536516.1| dihydroorotate dehydrogenase [Thioalkalimicrobium cyclicum ALM1]
gi|333964271|gb|AEG31037.1| dihydroorotate dehydrogenase family protein [Thioalkalimicrobium
cyclicum ALM1]
Length = 315
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 161/341 (47%), Gaps = 33/341 (9%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPG--TNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
DLS+ V G+ +P + SG G Y + ++ GAV K +L+ K+ N R
Sbjct: 3 DLSVNVCGVTCHSPVAMASGNAGYGLEYQAVSGFRNQDVGAVFLKGTTLEP-KLGNKAER 61
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
G S IG +N + D ++ +L + Y + +SI EEY
Sbjct: 62 VWETPNGLLNS-----IGLQNPGV--DYVVKQLLPQLDYTATRYFANVSGSSI-EEY--- 110
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
E+ R ++T + +E+N SCP+ +K GAA G D + V A + P+
Sbjct: 111 --AEVCKRFDDTQLAGLEINISCPN---VKKGGAAFGNDPDMAARVVEACRASTSKPLIV 165
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN TDI E AR + +G++ +SAINT+M M I++ T RP+ + GG S A
Sbjct: 166 KLSPNQTDIAEGARRVIDAGADALSAINTLMG-MSINIDTWRPDLG----NNQGGLSGPA 220
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ P+AL +V + ++ K + + G+GGV + DA EF L GA V V T +
Sbjct: 221 IKPVALLRVHQVYQVAKQH----NIPIIGLGGVSSAEDAIEFFLAGATMVAVGTSLAKDP 276
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELV 384
L+ ++ +++ +++ S+ G HT+ V
Sbjct: 277 M-LIAKMNKDIARYLQKRGLGSVSQLTGK----LELHTDTV 312
>gi|419782703|ref|ZP_14308501.1| dihydroorotate oxidase, catalytic subunit [Streptococcus oralis
SK610]
gi|383182916|gb|EIC75464.1| dihydroorotate oxidase, catalytic subunit [Streptococcus oralis
SK610]
Length = 312
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 158/332 (47%), Gaps = 41/332 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N L E +L E L+ YP +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQNPGL------EAVLAEKLPWLEREYPTLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
AA I + + + AIE+N SCP HG G +GQD L EV +
Sbjct: 113 -AAVSRGISKAKN--VKAIELNISCPNVDHG----NHGLLIGQDPDLAYEVVKAAVEASD 165
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VPV+ K+TP++TD+ A+ A +G+ G++ INT++ M DLKT +P + T GG
Sbjct: 166 VPVYVKLTPSVTDVVTIAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GG 220
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 221 MSGPAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTA 273
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 274 NFTNPYA-CPDIIEHLPKVMDKYGISSLEELR 304
>gi|259502016|ref|ZP_05744918.1| dihydroorotate oxidase [Lactobacillus antri DSM 16041]
gi|259170017|gb|EEW54512.1| dihydroorotate oxidase [Lactobacillus antri DSM 16041]
Length = 308
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 154/326 (47%), Gaps = 32/326 (9%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L++ + GL + NP + SG G + K G++V K+ +L A + N PR
Sbjct: 7 LAVELPGLSLKNPIIPASGTCGYGQQLAKNYDLNLLGSLVLKSTTLHA-RAGNPQPRVCE 65
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIMEEYNKAAW 165
AG W N + + + ++KE L YP +IAS ++ A +
Sbjct: 66 TSAG-----------WLNANGLQNVGVTAVVKEKLPWLHQHYPSLPVIAS-AAGFSTAEY 113
Query: 166 EELIDRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT-VPVWA 223
E +++++ ++AIE+N SCP+ + G A+G D +LE + + +A P++
Sbjct: 114 ETVVEQLAAAPTVNAIELNVSCPN---VKHGGLAMGTDPAVLEGLTRKVVRRAKGKPIYV 170
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K+TPN+TDI A+ A R G+ G++ INT+ + IDL+T RP + GG S A
Sbjct: 171 KLTPNVTDIVPLAQAAERGGANGLTMINTLTG-LSIDLRTRRPVLA----NVTGGLSGPA 225
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ P+AL +M+ + G+GG+ET D EF++ GAN V+V H
Sbjct: 226 LKPMAL-------RMIHQVRAVSSLPIIGVGGIETAEDVLEFMMAGANAVEV-GAASFHD 277
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDF 369
R+ +L M + + D
Sbjct: 278 PLACPRIVADLPLVMDRYGIKKLTDL 303
>gi|417940290|ref|ZP_12583578.1| dihydroorotate dehydrogenase 1B [Streptococcus oralis SK313]
gi|343389171|gb|EGV01756.1| dihydroorotate dehydrogenase 1B [Streptococcus oralis SK313]
Length = 312
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 157/332 (47%), Gaps = 41/332 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N L E +L E L+ YP +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQNPGL------EAVLAEKLPWLEREYPTLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
AA I + + AIE+N SCP HG G +GQD L EV +
Sbjct: 113 -AAVSRGISKA--ANVKAIELNISCPNVDHG----NHGLLIGQDPDLAYEVVKAAVEASD 165
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VPV+ K+TP++TDI A+ A +G+ G++ INT++ M +LKT +P + T GG
Sbjct: 166 VPVYVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFNLKTRKP---ILANGT-GG 220
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 221 MSGPAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTA 273
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+ED R
Sbjct: 274 NFTNPYA-CPDIIEHLPTVMDKYGISSLEDLR 304
>gi|218778655|ref|YP_002429973.1| dihydroorotate dehydrogenase family protein [Desulfatibacillum
alkenivorans AK-01]
gi|218760039|gb|ACL02505.1| dihydroorotate dehydrogenase family protein [Desulfatibacillum
alkenivorans AK-01]
Length = 306
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 152/333 (45%), Gaps = 35/333 (10%)
Query: 42 SAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVT 101
S +P L + + G+ + NP + SG G G ++ K +SL+ + N
Sbjct: 2 SDKPALGVELGGVFLDNPVMTASGTFGYATEFASLMDLNRLGGIIVKGLSLEPSSG-NPP 60
Query: 102 PRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKIL--IASIME 158
PR G + IG EN+ + E ++ +L L P +L E
Sbjct: 61 PRVVETPCGMLNA-----IGLENMGI------EAFFQDKLPELTKLAPPLVLNIYGKTSE 109
Query: 159 EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
EY + A ID VE+ + IEVN SCP+ G A G D + + G + A+
Sbjct: 110 EYERLAAR--IDNVED--VAGIEVNISCPN---VSAGGIAFGVDPMMAARLVGKVRARTR 162
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
PV K++PN+TD+T AR +G++ +S INT+ M IDL RP + GG
Sbjct: 163 KPVIVKLSPNVTDVTAIARAVEDAGADAISLINTLTG-MAIDLDARRPVLA----NITGG 217
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S A+ P+AL V +AK++K + GIGG+ DA EF++ GA+ +QV T
Sbjct: 218 LSGPAIKPVALRMVWQVAKVVK-------VPVIGIGGIMNARDALEFLMAGASAIQVGTA 270
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ VK L E ++ + + I DF G
Sbjct: 271 NFVDPASPVKIL-EGIEAYFMENQIKDISDFIG 302
>gi|389576343|ref|ZP_10166371.1| dihydroorotate dehydrogenase family protein [Eubacterium
cellulosolvens 6]
gi|389311828|gb|EIM56761.1| dihydroorotate dehydrogenase family protein [Eubacterium
cellulosolvens 6]
Length = 304
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 160/328 (48%), Gaps = 34/328 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L++++ G+++ NP + SG G+ + GAVV K V+ + N TPR A
Sbjct: 7 LAVSLAGVELKNPVMTASGTFGSGAEYSEFVDLNRLGAVVTKGVA-NVPWPGNPTPRVAE 65
Query: 107 LRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
+ G + IG +N I++ +R + + K Y KI++ +++
Sbjct: 66 VYGGMLNA-----IGLQNPGIDVFCERDIPFLKK--------YDTKIIVNVC--GHSEEE 110
Query: 165 WEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
+ E++DR+ + +D +E+N SCP+ ++ G A G D ++ E++ + A PV K
Sbjct: 111 YLEVVDRLADEPVDMLEINISCPN---VKEGGIAFGTDPKVAEQITKAVKTHAKQPVIMK 167
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
++PN+TDITE AR G++ +S INT+ M ID+ + V T GG S AV
Sbjct: 168 LSPNVTDITEMARAVEAGGADVISLINTLTG-MKIDVNRRK---FVLANKT-GGMSGPAV 222
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
PIA+ V +A+ +K + G+GG+ T DA EFIL GA V V T +
Sbjct: 223 KPIAVRMVYQVAQAVK-------VPIIGMGGIATAEDALEFILAGATAVSVGTANFIDPM 275
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGA 372
+++ + L ++ I + GA
Sbjct: 276 A-TEKIVDGLTAYLDEQKIGDIRELIGA 302
>gi|332297006|ref|YP_004438928.1| dihydroorotate dehydrogenase family protein [Treponema
brennaborense DSM 12168]
gi|332180109|gb|AEE15797.1| dihydroorotate dehydrogenase family protein [Treponema
brennaborense DSM 12168]
Length = 588
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 154/334 (46%), Gaps = 28/334 (8%)
Query: 43 AEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTP 102
AEPDLS+T+ G++ NP + SG G + A + G + +K ++L+ + N
Sbjct: 277 AEPDLSVTIAGVRFANPVIAASGTFGYGGEYGELADVQSLGGICSKGLTLEG-RPGNSGV 335
Query: 103 RYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKI--LIASIMEEY 160
R AG S IG EN + + E Q+ AL P I L S +E Y
Sbjct: 336 RLHETPAGVINS-----IGLENPGIP-----HFIAHELPQMLALKPVAIANLSGSSIETY 385
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQD-CRLLEEVCGWINAKATV 219
K A + T + IE+N SCP+ + G A G D C + A
Sbjct: 386 VKGA-----QLLAGTDVPMIELNISCPN---VKAGGMAFGLDPCSAADVTAAVRKAAPRT 437
Query: 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279
P+ K++PN D+ A +G++ +S INT+ ++ ID++ RP + G
Sbjct: 438 PLIVKLSPNAPDVVAVAHAVRTAGADAISLINTVQAI-AIDIEKARPV----FANVRAGL 492
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S AV P+AL V + + M + + G+GG+ T DA EFI+ GA+ VQV T
Sbjct: 493 SGPAVKPLALRLVYDLVQSMNRLPQRERIPVIGLGGIATWQDAVEFIMAGASAVQVGTAT 552
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+K + E + +FM+ + S+++ RGA+
Sbjct: 553 FADPL-CMKHIIEGIGNFMRRKGYRSLDELRGAA 585
>gi|270296702|ref|ZP_06202901.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270272689|gb|EFA18552.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 303
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 161/330 (48%), Gaps = 35/330 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ + LQM NP + SG G G ++ K +L + N PR A
Sbjct: 3 DLSVNIGELQMNNPVMTASGTFGYGEEFADFIELSRIGGIIVKGTTLHKREG-NPYPRMA 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKIL--IASIMEEYNK 162
+G + +G +N + + ++ + ++K + + I+ S +E+Y +
Sbjct: 62 ETPSGMLNA-----VGLQN------KGVHYFVEHIYPRIKDIQTNMIVNVSGSAIEDYAE 110
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
A +I+ +++ I AIE+N SCP+ ++ G A G + EEV + + +
Sbjct: 111 TA--AIINELDK--IPAIELNISCPN---VKQGGMAFGVTAKGAEEVVKAVRSVYKKTLI 163
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
K++PN+TDITE AR A G++ VS INT++ M ID + RP + GG S
Sbjct: 164 VKLSPNVTDITEIARAAENGGADSVSLINTLLG-MAIDAERRRPILS----TVTGGMSGA 218
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
AV PIAL V +AK +K + G+GG+ DA EF+L GA+ +Q+ T +
Sbjct: 219 AVKPIALRMVWQVAKAVK-------IPVIGLGGIMNWKDAVEFMLAGASAIQIGTANFID 271
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
VK + E + D++ H + SI+D GA
Sbjct: 272 PAVTVK-VVEGINDYLDRHGYQSIKDIIGA 300
>gi|312622390|ref|YP_004024003.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202857|gb|ADQ46184.1| dihydroorotate dehydrogenase family protein [Caldicellulosiruptor
kronotskyensis 2002]
Length = 300
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 156/330 (47%), Gaps = 39/330 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+L + + G+++ NP + SG G K +GA+ K ++L ++ N PR
Sbjct: 2 NLEVEIAGVRLKNPVIAASGTFGFGREYSKLIDISEFGAICTKGITLKK-RIGNPQPRLC 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ AG S +G EN +E + L LK F I+ N
Sbjct: 61 EVYAGIINS-----VGLENPGVEAFVNEEL-PFLKGFN------------TKIIANINGF 102
Query: 164 AWEELIDRVEETG--IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
EE ++ + G +D IEVN SCP+ ++ G A G+D + E+ + A+ P+
Sbjct: 103 TKEEFVELTKILGSLVDMIEVNLSCPN---VKEGGMAFGKDPEKVYEITKSVKDVASCPI 159
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
K+TPN+TDIT+ A A ++G++ +S INT+ S M ID++T +P GG S
Sbjct: 160 IVKLTPNVTDITQLAIAAEKAGADAISLINTV-SAMAIDIETRKPLI----KMVTGGLSG 214
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
A+ PIA+ +M+ F + G+GG+ DA EF + GA +Q+ T V
Sbjct: 215 PAIKPIAV-------RMVYECFKKVRIPIVGMGGIMNYKDAIEFFIAGATAIQIGT-VNF 266
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
V + E ++ +++ F+SI++ G
Sbjct: 267 INPKAVCEIKEGIEAYLERKGFNSIKELVG 296
>gi|387759218|ref|YP_006066196.1| dihydroorotate dehydrogenase, catalytic subunit [Streptococcus
pneumoniae INV200]
gi|419514518|ref|ZP_14054145.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae England14-9]
gi|301801807|emb|CBW34518.1| dihydroorotate dehydrogenase, catalytic subunit [Streptococcus
pneumoniae INV200]
gi|379637614|gb|EIA02167.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae England14-9]
Length = 312
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 158/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKA--ANVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASDVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLSGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+ED R
Sbjct: 277 NPYA-CPDIIENLPKAMDKYGISSLEDLR 304
>gi|295695968|ref|YP_003589206.1| dihydroorotate dehydrogenase family protein [Kyrpidia tusciae DSM
2912]
gi|295411570|gb|ADG06062.1| dihydroorotate dehydrogenase family protein [Kyrpidia tusciae DSM
2912]
Length = 309
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 166/330 (50%), Gaps = 33/330 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRY 104
DLS+ + G+++ NP + SG M R +D GA+V K +L+ + N TPR
Sbjct: 5 DLSVELAGIRLHNPVMPASGCFSYGRE-MSRWYDLSRLGAIVVKGTTLEL-RPGNPTPRV 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIA-SIMEEYNKA 163
A +G + IG +N + DR + L +Q P + +A S++EEY +
Sbjct: 63 AETPSGMLNA-----IGLQNPGV--DRVIAEELPALRQYGV--PVIVNVAGSVVEEYVET 113
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
A R + A+E+N SCP+ R G G D + EV + A + VPV+
Sbjct: 114 ARRLSGSR----DVAALELNISCPN---VRCGGMHFGTDPDMAAEVTAAVKAVSRVPVFV 166
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K++PN+TDI A+ R+G++G+S INT++ M ID++ R P + + GG S A
Sbjct: 167 KLSPNVTDIVALAQAVERAGADGLSMINTLVG-MRIDIE--RRRPILANFF--GGLSGPA 221
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ P+AL + ++++++ + G+GG+ +G DA EF + GA+ V V T +
Sbjct: 222 IKPVALRMIYEVSRVVR-------IPIIGMGGITSGEDAVEFFMAGASAVAVGTANFIKP 274
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
V L +EL + + H ++ + GA+
Sbjct: 275 TACVDIL-DELAAWCRNHGVRAVRELIGAA 303
>gi|225166802|ref|YP_002650787.1| putative dihydroorotate dehydrogenase family protein [Clostridium
botulinum]
gi|253771334|ref|YP_003034159.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
D str. 1873]
gi|225007466|dbj|BAH29562.1| putative dihydroorotate dehydrogenase family protein [Clostridium
botulinum]
gi|253721311|gb|ACT33604.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
D str. 1873]
Length = 362
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 157/331 (47%), Gaps = 38/331 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+LS + G+Q+ NP + SGP +Y M G G +V KT+S+ A+V PR
Sbjct: 2 NLSTKIAGIQLKNPLMPASGPLVGDYEKMMTLAGFGLGGMVTKTISIKGAEV----PRPC 57
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ + K I+ N EL S+ LE L E L L D + I Y K
Sbjct: 58 II------ANKDSIM---NAELWSEYSLEHWLHEI--LPKLKKDLNIPLIISVGYTKEDM 106
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+LI ++ D EV+ VG D ++ E I P + K+
Sbjct: 107 EKLIPVLDPYA-DGFEVSTH------------YVGTDLNVIGETVKTIRKNTKKPFFMKV 153
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY-SCKAV 284
+P++ D ARVA +G+ G++A+N++ M ID++ + + G S + S +
Sbjct: 154 SPHMPDHVAFARVARENGASGIAAVNSLGPSMKIDIENRK---VLVGNSQGEVWTSGPVI 210
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
P+ L V I M D+++ G+GGV + D EF+L GA+ VQ+ + M+ G
Sbjct: 211 KPVGLAIVNKIKTAMP------DFTVIGVGGVASADDVVEFLLAGADAVQMLSAAMLKGK 264
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
L +++ ++L + ++ +NFSS+E+ + +E
Sbjct: 265 DLYEKIIKDLPEVLEKYNFSSVEEVKNTKLE 295
>gi|417009105|ref|ZP_11945765.1| dihydroorotate dehydrogenase 1B, partial [Lactobacillus helveticus
MTCC 5463]
gi|328465360|gb|EGF36609.1| dihydroorotate dehydrogenase 1B [Lactobacillus helveticus MTCC
5463]
Length = 306
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 162/328 (49%), Gaps = 36/328 (10%)
Query: 49 ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARL 107
+ + GL + NP + SG G + FD GA+V KT + A N P+ A L
Sbjct: 6 VNLPGLDLKNPVMPASGTFGFGDVPAAQKFDLNDLGAMVIKTTT-PHATTGNPQPQIAIL 64
Query: 108 RAGANGSAKGQIIGWENI---ELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
G S +G N ++IS++ +L+ Y D ++AS+ + ++
Sbjct: 65 EDGVLNS-----VGLTNPGVDQVISEK--------LTKLRHQYLDLPIMASVGGD-SEDD 110
Query: 165 WEELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E+ ++ +G ++A+E+N SCP+ + G + G ++EE+ I +P++
Sbjct: 111 YVEVAKKLSASGLVNALEINVSCPN---VAQGGMSFGVHAGVVEELTKKIKMAVALPIYV 167
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K+TPN+TDI E A+ A G++G+S INT++ M ID+KT +P + G++ GG S +A
Sbjct: 168 KLTPNVTDIVEIAKAAESGGADGISMINTLLG-MRIDIKTRKP---LLGHNM-GGLSGEA 222
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
V PIA+ + + ++ + + G+GG+ T D EFIL GAN V V +
Sbjct: 223 VKPIAIRMISQVRQVTQ-------LPIIGMGGISTAQDVIEFILAGANAVAVGSAHFEDE 275
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
K + EEL ++ I D G
Sbjct: 276 LA-AKHIVEELPAELEKLGVEDINDLVG 302
>gi|260101461|ref|ZP_05751698.1| dihydroorotate oxidase [Lactobacillus helveticus DSM 20075]
gi|260084735|gb|EEW68855.1| dihydroorotate oxidase [Lactobacillus helveticus DSM 20075]
Length = 307
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 162/328 (49%), Gaps = 36/328 (10%)
Query: 49 ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARL 107
+ + GL + NP + SG G + FD GA+V KT + A N P+ A L
Sbjct: 6 VNLPGLDLKNPVMPASGTFGFGDVPAAQKFDLNDLGAMVIKTTT-PHATTGNPQPQIAIL 64
Query: 108 RAGANGSAKGQIIGWENI---ELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAA 164
G S +G N ++IS++ +L+ Y D ++AS+ + ++
Sbjct: 65 EDGVLNS-----VGLTNPGVDQVISEK--------LTKLRHQYLDLPIMASVGGD-SEDD 110
Query: 165 WEELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ E+ ++ +G ++A+E+N SCP+ + G + G ++EE+ I +P++
Sbjct: 111 YVEVAKKLSASGLVNALEINVSCPN---VAQGGMSFGVHAGVVEELTKKIKMAVALPIYV 167
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K+TPN+TDI E A+ A G++G+S INT++ M ID+KT +P + G++ GG S +A
Sbjct: 168 KLTPNVTDIVEIAKAAESGGADGISMINTLLG-MRIDIKTRKP---LLGHNM-GGLSGEA 222
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
V PIA+ + + ++ + + G+GG+ T D EFIL GAN V V +
Sbjct: 223 VKPIAIRMISQVRQVTQ-------LPIIGMGGISTAQDVIEFILAGANAVAVGSAHFEDE 275
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
K + EEL ++ I D G
Sbjct: 276 LA-AKHIVEELPAELEKLGVEDINDLVG 302
>gi|363900542|ref|ZP_09327047.1| hypothetical protein HMPREF9625_01707 [Oribacterium sp. ACB1]
gi|395208946|ref|ZP_10398111.1| dihydroorotate oxidase, catalytic subunit [Oribacterium sp. ACB8]
gi|361956416|gb|EHL09734.1| hypothetical protein HMPREF9625_01707 [Oribacterium sp. ACB1]
gi|394705547|gb|EJF13073.1| dihydroorotate oxidase, catalytic subunit [Oribacterium sp. ACB8]
Length = 302
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 154/321 (47%), Gaps = 58/321 (18%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVI----NVTP 102
+ T++G+++ NP + P + F + + ++S V N P
Sbjct: 4 IKTTLSGIELDNPII-----PASGTFAFGEEFKSLYDLNILGSLSFKGTTVEERPGNALP 58
Query: 103 RYARLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASI---- 156
R A G S +G +N ++ + + L + K FK K L+A+I
Sbjct: 59 RIAECPGGMLNS-----VGLQNPGVKKVVEEELPRLGKFFK--------KPLVANISGFS 105
Query: 157 MEEYNKAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWI 213
+E++ A E +D+VE GI +EVN SCP HG G A G D + +E VC +
Sbjct: 106 LEDF--AILSEEMDKVENVGI--LEVNISCPNVSHG------GMAFGTDAKSVEAVCRVV 155
Query: 214 NAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGY 273
K PV+ K++PN+TDITE AR A G++G+S INT++ M ID+K +P
Sbjct: 156 KEKTKKPVYMKLSPNVTDITEMARAAESGGADGLSLINTVLG-MRIDIKRRKPVLA---- 210
Query: 274 STPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTV 333
+ GGYS + PIA+ V ++ + +K L G+GG+ D E ++ GA+ V
Sbjct: 211 NKVGGYSGPGIFPIAVRAVYAVHQAVK-------LPLIGMGGISRAEDVLEMMMAGASAV 263
Query: 334 QVCTGVMMHGYGLVKRLCEEL 354
+V +++ R+CEE+
Sbjct: 264 EVGAENLVN-----PRVCEEI 279
>gi|312978330|ref|ZP_07790073.1| dihydroorotate oxidase [Lactobacillus crispatus CTV-05]
gi|310894849|gb|EFQ43920.1| dihydroorotate oxidase [Lactobacillus crispatus CTV-05]
Length = 307
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 152/288 (52%), Gaps = 33/288 (11%)
Query: 54 LQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRYARLRAGAN 112
L + NP + SG G + FD GA+V KT + A N P+ L G
Sbjct: 11 LDLKNPVMPASGTFGFGDVPAAKKFDLNDLGAMVIKTTT-PHATTGNPQPQIDVLDDGVL 69
Query: 113 GSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELID 170
S +G N +E + LE + K+ YP+ ++AS+ + ++A + E+
Sbjct: 70 NS-----VGLTNPGVEKVISEKLEPLRKQ-------YPELPIVASVGGD-SEADYVEVAQ 116
Query: 171 RVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNI 229
++ +G ++A+E+N SCP+ + G + G ++EE+ I A +P++ K+TPN+
Sbjct: 117 KLSNSGLVNALEINVSCPN---VAQGGMSFGVHADVVEELTRKIKAVVNIPIYVKLTPNV 173
Query: 230 TDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIAL 289
TDIT A+ A + G++G+S INT++ M ID+K RP + G++ GG S +AV PIA+
Sbjct: 174 TDITVIAKAAEKGGADGLSMINTLLG-MRIDVKKRRP---LLGHNM-GGLSGEAVKPIAI 228
Query: 290 GKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
+++S + + S + G+GG+ + D EF+L GAN V V T
Sbjct: 229 -RMISQVRQITS------LPIIGMGGIASAEDVVEFMLAGANAVAVGT 269
>gi|284048650|ref|YP_003398989.1| dihydroorotate dehydrogenase family protein [Acidaminococcus
fermentans DSM 20731]
gi|283952871|gb|ADB47674.1| dihydroorotate dehydrogenase family protein [Acidaminococcus
fermentans DSM 20731]
Length = 312
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 157/336 (46%), Gaps = 39/336 (11%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
+P + + + G+ M P SG F G+G ++LD I V
Sbjct: 7 DPRMQVDLAGVTMKTPVTTASG-----------TF--GFGLEFTDFLNLDHIGAITVKGT 53
Query: 104 YARLRAGANGSAKGQI-IGWENIELISDRPLETMLKE-FKQLKALYPDKILI---ASIME 158
+ R G G + G N + + +E LKE QL+ + +++ E
Sbjct: 54 TLKPRPGNKGQRVVETPAGVLNCVGLENPGVEFFLKETLPQLRKVTKTPVIVNIDGDSAE 113
Query: 159 EYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
+Y A E++D G+DAIE+N SCP+ + G A G DC EV A
Sbjct: 114 DYGTLA--EMLDV---DGVDAIELNISCPN---VAQGGLAFGTDCHAAGEVVKAAKAHTH 165
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
PV K++PN+TDITE AR +G++ +S INT++ M ID+ RP V G +T GG
Sbjct: 166 KPVITKLSPNVTDITEIARAVEAAGTDAISLINTLVG-MKIDIWKQRP---VLG-NTVGG 220
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S AVHP+A+ V +A+ +K L G+GG+ + DA EFIL GA V V T
Sbjct: 221 LSGPAVHPVAVRMVYQVAQAVK-------VPLIGMGGISSWQDAVEFILAGATAVAVGT- 272
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASI 374
L + + ++ ++ +S+++ RG ++
Sbjct: 273 CSFTDPSLAETISLGIQQYLDRTGAASLDEIRGQAL 308
>gi|384265135|ref|YP_005420842.1| dihydroorotate dehydrogenase 1B [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387898131|ref|YP_006328427.1| dihydroorotate oxidase [Bacillus amyloliquefaciens Y2]
gi|421731777|ref|ZP_16170900.1| dihydroorotate dehydrogenase 1B [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|429505105|ref|YP_007186289.1| dihydroorotate dehydrogenase 1B [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|452855501|ref|YP_007497184.1| dihydroorotate dehydrogenase (catalytic subunit) [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|380498488|emb|CCG49526.1| dihydroorotate dehydrogenase 1B [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387172241|gb|AFJ61702.1| dihydroorotate oxidase [Bacillus amyloliquefaciens Y2]
gi|407073990|gb|EKE46980.1| dihydroorotate dehydrogenase 1B [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|429486695|gb|AFZ90619.1| dihydroorotate dehydrogenase 1B [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|452079761|emb|CCP21518.1| dihydroorotate dehydrogenase (catalytic subunit) [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 311
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 168/334 (50%), Gaps = 37/334 (11%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + + GLQ+ NP + SG G G ++ K + + A+ N TPR A
Sbjct: 2 LEVNLPGLQLKNPIIPASGCFGFGKEYAGFYDLSCLGGIMIKATT-NEARFGNPTPRVAE 60
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI----MEEYNK 162
AG + Q G E++ L + P L++F D +IA++ +++Y +
Sbjct: 61 TSAGMLNAIGLQNPGLEHV-LNHELP---WLEQF--------DTPIIANVAGSQVDDYKE 108
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
A E I + + A+E+N SCP+ + G A G D + E+ + + VPV+
Sbjct: 109 VA--EHISQAPN--VHALELNISCPN---VKTGGIAFGTDPVMAAELTKAVKEVSAVPVY 161
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
K++PN+ +ITE A+ +G++G++ INT++ M +DLKT RP + T GG S
Sbjct: 162 VKLSPNVANITEIAKAIEAAGADGLTMINTLIG-MRLDLKTGRP---ILANKT-GGLSGP 216
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ P+A+ V +++ ++ + G+GGV+T DA EF+L GA+ V V T ++
Sbjct: 217 AIKPVAIRMVYEVSQAVQ-------IPIIGMGGVQTAEDALEFLLAGASAVAVGTANFVN 269
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEY 376
+ + + E+L ++ H F S+ + G S ++
Sbjct: 270 PF-VCPEIIEQLPRVLRQHGFQSVSECIGRSWKH 302
>gi|336113726|ref|YP_004568493.1| dihydroorotate dehydrogenase family protein [Bacillus coagulans
2-6]
gi|335367156|gb|AEH53107.1| dihydroorotate dehydrogenase family protein [Bacillus coagulans
2-6]
Length = 324
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 161/334 (48%), Gaps = 39/334 (11%)
Query: 45 PDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPR 103
PDL + + GL + NP + SG G R +D GA++ K + + + N PR
Sbjct: 20 PDLRVELPGLSLKNPVMPASGCFGFGRE-YSRWYDLSELGAIMIKATTREP-RFGNPVPR 77
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
A +G + IG +N L S + +E L+A D +IA++ +
Sbjct: 78 IAETESGMLNA-----IGLQNPGLAS-----VLAEELPFLQAY--DVPVIANVA----GS 121
Query: 164 AWEELI---DRVEET-GIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219
+E+ + D + + + A+E+N SCP+ + G A G D + E+ + A + V
Sbjct: 122 TFEDYVYVSDHLSKAPNVHALELNISCPN---VKSGGIAFGTDPEMAFELTRQVKAVSEV 178
Query: 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279
PV+ K++PN+TDI A+ A G++G++ INT++ M IDLKT RP E GG
Sbjct: 179 PVYVKLSPNVTDIVAIAKAAASGGADGLTMINTLLG-MKIDLKTARPVLANET----GGL 233
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S AV P+A+ V +++ + D + G+GG+ T DA EF+ GA+ V + T
Sbjct: 234 SGPAVKPVAVRMVYEVSR-------EVDIPIIGMGGIMTAEDAVEFLYAGASAVAIGTAN 286
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ R+ EL M+ SI+D G S
Sbjct: 287 FIDPLA-CPRIIRELPAVMEQLGAGSIQDLIGRS 319
>gi|15458470|gb|AAK99670.1| Dihydroorotate dehydrogenase [Streptococcus pneumoniae R6]
Length = 330
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 158/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K G+++ K +L+ + N TPR A
Sbjct: 24 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLNLLGSIMIKATTLEP-RFGNPTPRVAE 82
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 83 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 130
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 131 -AAVSHGISKA--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 186
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 187 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 241
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 242 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSTEAALEMYLAGASAIGVGTANFT 294
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 295 NPYA-CPDIIENLPKVMDKYGISSLEELR 322
>gi|385264678|ref|ZP_10042765.1| dihydroorotate dehydrogenase 1B [Bacillus sp. 5B6]
gi|385149174|gb|EIF13111.1| dihydroorotate dehydrogenase 1B [Bacillus sp. 5B6]
Length = 311
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 168/334 (50%), Gaps = 37/334 (11%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + + GLQ+ NP + SG G G ++ K + + A+ N TPR A
Sbjct: 2 LEVNLPGLQLKNPIIPASGCFGFGKEYAGFYDLSCLGGIMIKATT-NEARFGNPTPRVAE 60
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI----MEEYNK 162
AG + Q G E++ L + P L++F D +IA++ +++Y +
Sbjct: 61 TSAGMLNAIGLQNPGLEHV-LNHELP---WLEQF--------DTPIIANVAGSQVDDYKE 108
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
A E I + + A+E+N SCP+ + G A G D + E+ + + VPV+
Sbjct: 109 VA--EHISQAPN--VHALELNISCPN---VKTGGIAFGTDPVMAAELTKAVKEVSAVPVY 161
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
K++PN+ +ITE A+ +G++G++ INT++ M +DLKT RP + T GG S
Sbjct: 162 VKLSPNVANITEIAKAIEAAGADGLTMINTLIG-MRLDLKTGRP---ILANKT-GGLSGP 216
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ P+A+ V +++ ++ + G+GGV+T DA EF+L GA+ V V T ++
Sbjct: 217 AIKPVAIRMVYEVSQAVQ-------IPIIGMGGVQTAEDALEFLLAGASAVAVGTANFVN 269
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEY 376
+ + + E+L ++ H F S+ + G S ++
Sbjct: 270 PF-VCPEIIEQLPRVLRQHGFQSVSECIGRSWKH 302
>gi|416347971|ref|ZP_11680086.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
C str. Stockholm]
gi|338197116|gb|EGO89290.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
C str. Stockholm]
Length = 362
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 158/331 (47%), Gaps = 38/331 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
+LS + G+Q+ NP + SGP +Y M G G +V KT+S+ A+V PR
Sbjct: 2 NLSTKIAGIQLKNPLMPASGPLVGDYEKMMTLAGFGLGGMVTKTISIKGAEV----PRPC 57
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+ + K I+ N EL S+ LE L E L L D + I Y K
Sbjct: 58 II------ANKDSIM---NAELWSEYSLEHWLHEI--LPKLKRDLNIPLIISVGYTKEDM 106
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
E+LI ++ D EV+ VG+D ++ E I P + K+
Sbjct: 107 EKLIPVLDPYA-DGFEVSTH------------YVGKDLNVIGETVRTIRKNTKKPFFMKV 153
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY-SCKAV 284
+P++ D ARVA +G+ G++A+N++ M ID++ + + G S + S +
Sbjct: 154 SPHMPDHVAFARVARENGASGIAAVNSLGPSMKIDIENRK---VLVGNSQGEVWTSGPVI 210
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
P+ L V I M D+++ G+GGV + D EF+L GA+ VQ+ + M+ G
Sbjct: 211 KPVGLAIVNKIKTAMP------DFTVIGVGGVASAEDVVEFLLAGADAVQMLSAAMLKGK 264
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFRGASIE 375
L +++ ++L + ++ +NFSS+E+ + +E
Sbjct: 265 DLYEKIIKDLPEVLEKYNFSSVEEVKNTKLE 295
>gi|116517057|ref|YP_816334.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae D39]
gi|161410749|ref|NP_358460.2| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae R6]
gi|334350864|sp|Q8DQ37.2|PYRDB_STRR6 RecName: Full=Dihydroorotate dehydrogenase B (NAD(+)), catalytic
subunit; Short=DHOD B; Short=DHODase B; Short=DHOdehase
B; AltName: Full=Dihydrdoorotate oxidase B; AltName:
Full=Orotate reductase (NADH)
gi|116077633|gb|ABJ55353.1| dihydroorotate dehydrogenase, catalytic subunit [Streptococcus
pneumoniae D39]
Length = 312
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 158/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLNLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKA--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSTEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLEELR 304
>gi|421211067|ref|ZP_15668051.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2070035]
gi|421231737|ref|ZP_15688382.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2080076]
gi|395573790|gb|EJG34377.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2070035]
gi|395596227|gb|EJG56449.1| dihydroorotate dehydrogenase B, catalytic subunit [Streptococcus
pneumoniae 2080076]
Length = 312
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I +V T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKV--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A + + G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDARASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLEELR 304
>gi|417848243|ref|ZP_12494192.1| dihydroorotate dehydrogenase 1B [Streptococcus mitis SK1073]
gi|339454990|gb|EGP67603.1| dihydroorotate dehydrogenase 1B [Streptococcus mitis SK1073]
Length = 312
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 158/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N L E +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQNPGL------EVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSRGISKA--ANVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASDVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAETALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLENLR 304
>gi|417794254|ref|ZP_12441512.1| dihydroorotate dehydrogenase 1B [Streptococcus oralis SK255]
gi|334270098|gb|EGL88505.1| dihydroorotate dehydrogenase 1B [Streptococcus oralis SK255]
Length = 312
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 158/332 (47%), Gaps = 41/332 (12%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAEYYDLNLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETML-KEFKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L +E L+ YP +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEAVLSEELPWLEREYPSLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKAT 218
AA + I + + AIE+N SCP HG G +GQD L EV +
Sbjct: 113 -AAVSQGISKA--ANVKAIELNISCPNVDHG----NHGLLIGQDPDLAYEVVKAAVEASD 165
Query: 219 VPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGG 278
VPV+ K+TP++TDI A+ A +G+ G++ INT++ M +LKT +P + T GG
Sbjct: 166 VPVYVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFNLKTRKP---ILANGT-GG 220
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
S AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 221 MSGPAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTA 273
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+ED R
Sbjct: 274 NFTNPYA-CPDIIENLPKVMDKYGISSLEDLR 304
>gi|225854468|ref|YP_002735980.1| dihydroorotate dehydrogenase 1B [Streptococcus pneumoniae JJA]
gi|225723113|gb|ACO18966.1| dihydroorotate dehydrogenase B, catalytic subunit (dihydroorotate
oxidase b) (dhodehase b) (dhodase b) (dhod b)
[Streptococcus pneumoniae JJA]
Length = 312
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 158/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +I ++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIITNVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + T + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKA--TNVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASEVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLEELR 304
>gi|160889580|ref|ZP_02070583.1| hypothetical protein BACUNI_02006 [Bacteroides uniformis ATCC 8492]
gi|317480071|ref|ZP_07939182.1| dihydroorotate dehydrogenase [Bacteroides sp. 4_1_36]
gi|156861097|gb|EDO54528.1| dihydroorotate dehydrogenase 1B [Bacteroides uniformis ATCC 8492]
gi|316903748|gb|EFV25591.1| dihydroorotate dehydrogenase [Bacteroides sp. 4_1_36]
Length = 303
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 161/330 (48%), Gaps = 35/330 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DLS+ + LQM NP + SG G G ++ K +L + N PR A
Sbjct: 3 DLSVNIGELQMNNPVMTASGTFGYGEEFADFIELSRIGGIIVKGTTLHKREG-NPYPRMA 61
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKIL--IASIMEEYNK 162
+G + +G +N + + ++ + ++K + + I+ S +E+Y +
Sbjct: 62 ETPSGMLNA-----VGLQN------KGVHYFVEHIYPRIKDIQTNMIVNVSGSAIEDYAE 110
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
A +I+ +++ I AIE+N SCP+ ++ G A G + EEV + + +
Sbjct: 111 TA--AIINELDK--IPAIELNISCPN---VKQGGMAFGVTAKGAEEVVKAVRSVYKKTLI 163
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
K++PN+TDITE AR A G++ VS INT++ M ID + RP + GG S
Sbjct: 164 VKLSPNVTDITEIARAAENGGADSVSLINTLLG-MAIDAERRRPILS----TVTGGMSGA 218
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
AV PIAL V +AK +K + G+GG+ DA EF+L GA+ +Q+ T +
Sbjct: 219 AVKPIALRMVWQVAKAVK-------IPVIGLGGIMNWKDAVEFMLAGASAIQIGTANFID 271
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
VK + E + D++ H + S++D GA
Sbjct: 272 PAVTVK-VVEGINDYLNRHGYQSVKDIIGA 300
>gi|417915124|ref|ZP_12558745.1| dihydroorotate dehydrogenase 1B [Streptococcus mitis bv. 2 str.
SK95]
gi|342835238|gb|EGU69489.1| dihydroorotate dehydrogenase 1B [Streptococcus mitis bv. 2 str.
SK95]
Length = 312
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 157/329 (47%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIMEEYNKAAW 165
AG + IG +N L E +L E L+ YP +IA++ ++K +
Sbjct: 65 TPAGMLNA-----IGLQNPGL------EAVLAEKLPWLEREYPTLPIIANV-AGFSKQEY 112
Query: 166 EELIDRVEE-TGIDAIEVNFSCP---HGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
+ + + T + AIE+N SCP HG G +GQD L EV + VPV
Sbjct: 113 ATVSRGISKATNVKAIELNISCPNVDHG----NHGLLIGQDPDLAYEVVKAAVEASDVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TD+ A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDVVTIAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLEALR 304
>gi|357052213|ref|ZP_09113324.1| dihydroorotate dehydrogenase [Clostridium clostridioforme
2_1_49FAA]
gi|355387028|gb|EHG34061.1| dihydroorotate dehydrogenase [Clostridium clostridioforme
2_1_49FAA]
Length = 300
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 159/332 (47%), Gaps = 40/332 (12%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
++S+ + G++ NP + SG G+ + GAVV K V+ A N TPR A
Sbjct: 2 NMSVNIAGVEFKNPVMEASGTFGSGMEYSEFVDLNRLGAVVTKGVA-SAPWPGNPTPRIA 60
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
+ G + IG +N IE+ + R + LK++ D ++ ++ +
Sbjct: 61 EVYGGMLNA-----IGLQNPGIEVFTKRDIP-FLKQY--------DTKIVVNVCGK---- 102
Query: 164 AWEELIDRVEETG---IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
EE ID VE G D +E+N SCP+ ++ G A GQD + +E + + A A P
Sbjct: 103 TTEEYIDVVERLGDQPADMLEINISCPN---VKEGGIAFGQDPKAVEAITREVKAHAKQP 159
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
+ K++PN+TDIT AR A G++ +S INT+ M ID+ + + GG S
Sbjct: 160 IIMKLSPNVTDITVMARAAEAGGADAISLINTLTG-MKIDIH----KKAFALANRTGGLS 214
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
AV P+A+ V A+ +K + G+GG+ DA EFIL GA V + T
Sbjct: 215 GPAVKPVAVRMVYQAARAVK-------VPIIGMGGIRNADDALEFILAGATAVAIGTANF 267
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
+ Y V+ + + ++ +M+ + I + GA
Sbjct: 268 HNPYATVETV-DGIRAYMEKYGIGDIRELIGA 298
>gi|386875862|ref|ZP_10118016.1| putative dihydroorotate dehydrogenase 1B [Candidatus Nitrosopumilus
salaria BD31]
gi|386806334|gb|EIJ65799.1| putative dihydroorotate dehydrogenase 1B [Candidatus Nitrosopumilus
salaria BD31]
Length = 303
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 154/328 (46%), Gaps = 31/328 (9%)
Query: 44 EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
EP L ++ +Q+ P ++ SG G + V KR + G GAVV K++S++ + P
Sbjct: 2 EPSLETSIGQIQLDRPVMLASGILGISLDVFKRLYLSGAGAVVTKSLSIEPWEGYP-NPT 60
Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
++ G GW N +S+ K + K + L+ SI E++
Sbjct: 61 ILSVKGG----------GWINAVGLSNPGAPNFAKMIEPNKDVPIIVSLVGSIPEDF--- 107
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
E +I + E + A E+N SCPH K+G VG D L++++ + VPV A
Sbjct: 108 --EMMIKQFEHCQVTAYELNLSCPH---VAKVGLEVGDDPELVKKIVTAVKNSTNVPVIA 162
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKA 283
K+ ++ A+ SG + ++AINT+ + M ID + RP + GG S
Sbjct: 163 KVGLGTSNYLNTVGTAIDSGIDAITAINTVRA-MAIDAEIQRPILS----NRYGGLSGTP 217
Query: 284 VHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHG 343
+ PIAL V I+ + D + G GG+ T DA EF L GA+ +Q+ + + +
Sbjct: 218 IKPIALRCVYEIS-------SKYDIPIIGCGGISTWEDAIEFFLAGASAIQLGSAIGDNW 270
Query: 344 YGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ + + + +MK ++S+I++ G
Sbjct: 271 ITVFHEINKGILQYMKRKDYSNIQEMVG 298
>gi|418967433|ref|ZP_13519096.1| dihydroorotate dehydrogenase 1B [Streptococcus mitis SK616]
gi|383344046|gb|EID22216.1| dihydroorotate dehydrogenase 1B [Streptococcus mitis SK616]
Length = 312
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 158/329 (48%), Gaps = 35/329 (10%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIM----EEYN 161
AG + IG +N LE +L E L+ YP+ +IA++ +EY
Sbjct: 65 TPAGMLNA-----IGLQN------PGLEVVLAEKLPWLEREYPNLPIIANVAGFSKQEY- 112
Query: 162 KAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPV 221
AA I + + AIE+N SCP+ + G +GQD L +V + VPV
Sbjct: 113 -AAVSHGISKA--ANVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASDVPV 168
Query: 222 WAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSC 281
+ K+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S
Sbjct: 169 YVKLTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSG 223
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
AV P+AL K+++ D + G+GGV++ A E L GA+ + V T
Sbjct: 224 PAVFPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFT 276
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFR 370
+ Y + E L M + SS+E+ R
Sbjct: 277 NPYA-CPDIIENLPKVMDKYGISSLENLR 304
>gi|381179577|ref|ZP_09888427.1| dihydroorotate dehydrogenase family protein [Treponema
saccharophilum DSM 2985]
gi|380768524|gb|EIC02513.1| dihydroorotate dehydrogenase family protein [Treponema
saccharophilum DSM 2985]
Length = 591
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 156/335 (46%), Gaps = 33/335 (9%)
Query: 42 SAEPDLSITVNGLQMPNPFVIGSGP--PGTNYTVMKRAFDEGW-GAVVAKTVSLDAAKVI 98
S +PDLS+ +NG++ NP + SG G+ Y+ FD G + +K ++L+ K
Sbjct: 282 SEKPDLSVEINGVRFKNPVIAASGTFGYGSEYS---SVFDVNLLGGICSKGLTLEP-KAG 337
Query: 99 NVTPRYARLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASI 156
N R +G S IG EN I + L M K+FK P L S
Sbjct: 338 NTGVRLVETPSGLINS-----IGLENPGIAHFIEHELPVM-KKFKTT----PIANLSGSS 387
Query: 157 MEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAK 216
++ Y + A L+D+ T I IE+N SCP+ + G A G DC V +
Sbjct: 388 IDGYVEGA--RLLDK---TDIPMIELNISCPN---VKAGGMAFGMDCVAASTVTKAVREA 439
Query: 217 ATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTP 276
P+ K++PN D+ A +G++ +S +NT + M ID++T RP +
Sbjct: 440 TKKPLMVKLSPNAPDLVGIAMAVREAGADAISLVNTFQA-MSIDVETGRPV----FDNVK 494
Query: 277 GGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVC 336
G A+ P+AL V + M + + GIGG+ T DA EFI+ GA+ VQV
Sbjct: 495 AGLCGPAIRPLALRMVFDVVAAMNKLPEAERIPVVGIGGIATWRDAVEFIMAGASAVQVG 554
Query: 337 TGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
T + +++ + ++ +MK F ++DFRG
Sbjct: 555 TATFANPRAMIE-IISGIESYMKRKGFRKLDDFRG 588
>gi|297569958|ref|YP_003691302.1| dihydroorotate dehydrogenase family protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296925873|gb|ADH86683.1| dihydroorotate dehydrogenase family protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 308
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 150/329 (45%), Gaps = 29/329 (8%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
DL + + G NP + SG G GAVV K VSL + N PR
Sbjct: 8 DLQVEIAGCTFRNPVMTASGTFGYGREFEDFVNVSRLGAVVVKGVSL-LPRAGNPPPRVV 66
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
G + IG EN+ + + L L +L A IL + ++EY + A
Sbjct: 67 ETPCGMLNA-----IGLENVGV--EAFLHEKLPWLVELGATVVVNIL-GNTVDEYAQLAR 118
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
+D +E G+ A+EVN SCP+ ++ G A G D + V + + +P+ K+
Sbjct: 119 R--LDGIE--GVTALEVNISCPN---VKEGGVAFGTDPLMASAVTAAVRRASKLPLIIKL 171
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
+PN+TDI AR SG++ VS INT++ M IDL RP + GG S A+
Sbjct: 172 SPNVTDIQLMARSVAESGADAVSLINTLLG-MAIDLAGRRPRLA----NVVGGLSGPAIK 226
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
P+AL V A+ +K + GIGG+ T DA EFI+ GA+ VQV T ++ G
Sbjct: 227 PVALRMVWQAAQAVK-------IPVIGIGGIMTAEDALEFIVAGAHAVQVGTANFVN-PG 278
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGASI 374
+ + E + ++ SI R I
Sbjct: 279 ATEEIVEGIAAYLAKQGLKSINQLRNTLI 307
>gi|163816502|ref|ZP_02207866.1| hypothetical protein COPEUT_02691 [Coprococcus eutactus ATCC 27759]
gi|158448202|gb|EDP25197.1| dihydroorotate oxidase [Coprococcus eutactus ATCC 27759]
Length = 304
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 163/330 (49%), Gaps = 38/330 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
++S+ + G+ + NP + SG G+ + GAV K V+ + N TPR A
Sbjct: 6 NMSVDIAGVTLKNPITVASGTFGSGMEYSEFVDLSQLGAVTTKGVA-NVPWPGNPTPRIA 64
Query: 106 RLRAGANGSAKGQIIGWEN--IELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKA 163
G + IG +N I++ R + L+++ D +I ++ + +K
Sbjct: 65 ETYGGMMNA-----IGLQNPGIDVFKKRDI-LFLRDY--------DTKIIVNVCGK-SKE 109
Query: 164 AWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWA 223
+ + ++++ + +D +E+N SCP+ ++ G A GQ L ++ + A A P+
Sbjct: 110 DYVDCVEKLGDCDVDLLEINVSCPN---VKEGGIAFGQQPDALYDITKAVKAAAKQPIIM 166
Query: 224 KMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDL--KTLRPEPCVEGYSTPGGYSC 281
K++PN+TDITE AR A G++ VS INT+ M ID+ +T G S P
Sbjct: 167 KLSPNVTDITEMARAAEAGGADAVSLINTLTG-MKIDVNRRTFAVANKTAGVSGP----- 220
Query: 282 KAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMM 341
A+HPIA+ V +A +K + G+GGV T DA E I++GA+ V V T
Sbjct: 221 -AIHPIAVRMVYQVANAIK-------LPIIGMGGVATTEDALEMIMVGASAVAVGTANFH 272
Query: 342 HGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
+ Y V+ + + ++++MK ++ S I + G
Sbjct: 273 NPYATVE-IIKGIEEYMKKNSISDIHELIG 301
>gi|424780145|ref|ZP_18207025.1| Dihydroorotate dehydrogenase, catalytic subunit [Catellicoccus
marimammalium M35/04/3]
gi|422843103|gb|EKU27544.1| Dihydroorotate dehydrogenase, catalytic subunit [Catellicoccus
marimammalium M35/04/3]
Length = 303
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 168/332 (50%), Gaps = 47/332 (14%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGW-----GAVVAKTVSLDAAKVINVT 101
L++ + GL+M NP + SG G M + F E + GA++ K ++L+ + N T
Sbjct: 4 LAVELPGLKMKNPIMPASGCFG-----MGKEFGELYDLNQLGALITKAITLEP-RFGNPT 57
Query: 102 PRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM---- 157
PR A G + IG +N + L+T+ E + D L+A+I
Sbjct: 58 PRVAETPQGMLNA-----IGLQN------KGLDTVCAEELSYYESF-DVPLLANIAGSTK 105
Query: 158 EEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA 217
EEY A +++ + ++ + A+E+N SCP+ ++ G G D ++ ++ + +
Sbjct: 106 EEYEIVA--QILSK--QSVVSALELNISCPN---VKEGGITFGTDSDIVFDLVQSVKKVS 158
Query: 218 TVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPG 277
TVPV+ K++PN+TDI E A+ A G++G++ INT++ M ++LKT +P + G
Sbjct: 159 TVPVYVKLSPNVTDIVEIAKAAEAGGADGLTLINTLLG-MRMNLKTRKPLLA----NGTG 213
Query: 278 GYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCT 337
G S AV P+AL V +A + + GIGG+ T D EF++ GA+ VQ+ T
Sbjct: 214 GLSGPAVLPVALRCVYQVA-------HATSLPIIGIGGISTVDDVLEFLMAGASAVQIGT 266
Query: 338 GVMMHGYGLVKRLCEELKDFMKMHNFSSIEDF 369
+ Y + + ++L+ M N SS+E
Sbjct: 267 ANFVDPY-VCPIIIDQLETRMDELNISSLEQL 297
>gi|363892857|ref|ZP_09320003.1| dihydroorotate dehydrogenase [Eubacteriaceae bacterium CM2]
gi|402839323|ref|ZP_10887815.1| dihydroorotate oxidase [Eubacteriaceae bacterium OBRC8]
gi|361962101|gb|EHL15249.1| dihydroorotate dehydrogenase [Eubacteriaceae bacterium CM2]
gi|402270529|gb|EJU19790.1| dihydroorotate oxidase [Eubacteriaceae bacterium OBRC8]
Length = 303
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 161/331 (48%), Gaps = 38/331 (11%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEG-WGAVVAKTVSLDAAKVINVTPRY 104
D S+ ++GL + NP + SG G K +D G++ K ++D + N+ PR
Sbjct: 3 DTSVNLSGLVLDNPIIPASGTFGFGQE-YKDFYDINILGSISFKGTTVDM-RFGNMQPRI 60
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI----MEEY 160
A AG S Q G E + + +E L +Y K+ IA+I ++EY
Sbjct: 61 AECTAGLINSVGLQNPGLEKV----------ISEELPNLAKIYHKKV-IANISGFSIDEY 109
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
K A E ++ V+ GI IEVN SCP+ G A G + EV + + P
Sbjct: 110 VKCA--EAMNEVDMVGI--IEVNVSCPN---VHNGGMAYGVCPESVSEVTKAVKKVTSKP 162
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
V+ K++PN+TDITE A+ SG++G+S INT++ M ID++ + P + + GG+S
Sbjct: 163 VYIKLSPNVTDITEIAKACEYSGADGISMINTLLG-MRIDIR--KKAPVIA--NKMGGFS 217
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
A+ PIAL V +A +K + G+GGV + D E ++ GA VQ+ +
Sbjct: 218 GPAIFPIALRMVYQVANAVK-------IPIIGMGGVSSTSDVIEMMMAGATAVQIGAANL 270
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
++ + + K + + L M+ N + D G
Sbjct: 271 VNPF-ICKEIIDSLPSKMQELNIEKLSDIIG 300
>gi|418036327|ref|ZP_12674754.1| Dihydroorotate oxidase (fumarate) [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1519]
gi|354688119|gb|EHE88166.1| Dihydroorotate oxidase (fumarate) [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1519]
Length = 307
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 163/331 (49%), Gaps = 36/331 (10%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRY 104
++ + + GL + NP + SG G + FD GA+V KT + A N P+
Sbjct: 3 NIHVNLPGLDLKNPVMPASGTFGFGDVPAAQKFDLNDLGAMVIKTTT-PHATTGNPQPQI 61
Query: 105 ARLRAGANGSAKGQIIGWENI---ELISDRPLETMLKEFKQLKALYPDKILIASIMEEYN 161
A L G S +G N ++IS++ +L+ Y D ++AS+ + +
Sbjct: 62 AILEDGVLNS-----VGLTNPGVDQVISEK--------LTKLRHQYLDLPIMASVGGD-S 107
Query: 162 KAAWEELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
+ + E+ ++ +G ++A+E+N SCP+ + G + G ++EE+ I +P
Sbjct: 108 EDDYVEVAKKLSASGLVNALEINVSCPN---VAQGGMSFGVHAGVVEELTKKIKMAVALP 164
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS 280
++ K+TPN+TDI E A+ A G++G+S INT++ M ID+KT +P + G++ GG S
Sbjct: 165 IYVKLTPNVTDIVEIAKAAESGGADGISMINTVLG-MRIDVKTRKP---LLGHNM-GGLS 219
Query: 281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVM 340
+AV PIA+ + + ++ + + G+GG+ T D EFIL GAN V V +
Sbjct: 220 GEAVKPIAIRMISQVRQVTQ-------LPIIGMGGISTAQDVIEFILAGANAVAVGSAHF 272
Query: 341 MHGYGLVKRLCEELKDFMKMHNFSSIEDFRG 371
K + E L ++ I D G
Sbjct: 273 EDELA-AKHIAENLPAELEKLGIEDINDLVG 302
>gi|365841498|ref|ZP_09382571.1| dihydroorotate oxidase, catalytic subunit [Flavonifractor plautii
ATCC 29863]
gi|364577579|gb|EHM54837.1| dihydroorotate oxidase, catalytic subunit [Flavonifractor plautii
ATCC 29863]
Length = 306
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 161/337 (47%), Gaps = 41/337 (12%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFD-EGWGAVVAKTVSLDAAKVINVTPRY 104
D S+ + G++M NP V+ SG G R +D G + K ++L + N PR
Sbjct: 5 DQSVVLAGVRMKNPVVVASGTFGFGRE-YGRFYDLSELGGICCKGLTL-CRREGNPPPRI 62
Query: 105 ARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIM----EEY 160
A G S +G +N + D + L E ++ D +IA+I EEY
Sbjct: 63 AETPMGILNS-----VGLQNPGV--DAFIAEELPELRKH-----DLAVIANISGNTPEEY 110
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKA-TV 219
+ +++ G+D IEVN SCP+ + G A G L EV A A V
Sbjct: 111 GV-----MCEKLSAAGVDMIEVNISCPN---VKAGGLAYGTKPELAAEVTAVAKAHAGRV 162
Query: 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279
PV K++PN+TDITE AR +G++ +S INT+ M ID++T RP + +T GG
Sbjct: 163 PVMVKLSPNVTDITEIARAVADAGADALSLINTLRG-MRIDVRTRRP---ILKMNT-GGL 217
Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
S AV P+A+ V +A+ +K + G+GGV G DAA+ +L GA+ V V T
Sbjct: 218 SGPAVLPVAVRMVWEVAQAVK-------LPILGMGGVAKGEDAAQLLLAGASAVAVGTAC 270
Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEY 376
Y +K + + L + + + DF GA + +
Sbjct: 271 FDDPYAPIK-VRDGLASLAERQGLNKVSDFTGAVVPW 306
>gi|451347076|ref|YP_007445707.1| dihydroorotate dehydrogenase 1B [Bacillus amyloliquefaciens IT-45]
gi|449850834|gb|AGF27826.1| dihydroorotate dehydrogenase 1B [Bacillus amyloliquefaciens IT-45]
Length = 311
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 165/331 (49%), Gaps = 37/331 (11%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L + + GLQ+ NP + SG G G ++ K + + A+ N TPR A
Sbjct: 2 LEVNLPGLQLKNPIIPASGCFGFGKEYAGFYDLSCLGGIMIKATT-NEARFGNPTPRVAE 60
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASI----MEEYNK 162
AG + Q G E++ L + P L++F D +IA+I +++Y +
Sbjct: 61 TSAGMLNAIGLQNPGLEHV-LNHELP---WLEQF--------DTPIIANIAGSQVDDYKE 108
Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
A E I + + A+E+N SCP+ + G A G D + E+ + + VPV+
Sbjct: 109 VA--EHISQAPN--VHALELNISCPN---VKTGGIAFGTDPVMAAELTKAVKEVSAVPVY 161
Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
K++PN+ +ITE A+ +G++G++ INT++ M +DLKT RP + T GG S
Sbjct: 162 VKLSPNVANITEIAKAIEAAGADGLTMINTLIG-MRLDLKTGRP---ILANKT-GGLSGP 216
Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
A+ P+A+ V +++ ++ + G+GG +T DA EF+L GA+ V V T ++
Sbjct: 217 AIKPVAIRMVYEVSQAVQ-------IPIIGMGGAQTAEDALEFLLAGASAVAVGTANFVN 269
Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
+ + + E+L ++ H F S+ + G S
Sbjct: 270 PF-VCPEIIEQLPHVLRQHGFQSVSECIGRS 299
>gi|419767508|ref|ZP_14293661.1| dihydroorotate oxidase, catalytic subunit [Streptococcus mitis
SK579]
gi|383353051|gb|EID30678.1| dihydroorotate oxidase, catalytic subunit [Streptococcus mitis
SK579]
Length = 312
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 158/326 (48%), Gaps = 29/326 (8%)
Query: 47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
L +++ GL + NP + SG G K + G+++ K +L+ + N TPR A
Sbjct: 6 LQVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDLLGSIMIKATTLEP-RFGNPTPRVAE 64
Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIMEEYNKAAW 165
AG + IG +N L E +L E L+ YP+ +IA++ ++K +
Sbjct: 65 TPAGMLNA-----IGLQNPGL------EVVLAEKLPWLEREYPNLPIIANV-AGFSKQEY 112
Query: 166 EELIDRVEETG-IDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAK 224
+ + + + AIE+N SCP+ + G +GQD L +V + VPV+ K
Sbjct: 113 ASVSRGISKAANVKAIELNISCPN-VDHCNHGLLIGQDPDLAYDVVKAAVEASDVPVYVK 171
Query: 225 MTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAV 284
+TP++TDI A+ A +G+ G++ INT++ M DLKT +P + T GG S AV
Sbjct: 172 LTPSVTDIVTVAKAAEDAGASGLTMINTLVG-MRFDLKTRKP---ILANGT-GGMSGPAV 226
Query: 285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGY 344
P+AL K+++ D + G+GGV++ A E L GA+ + V T + Y
Sbjct: 227 FPVAL-------KLIRQVAQTTDLPIIGMGGVDSAEAALEMYLAGASAIGVGTANFTNPY 279
Query: 345 GLVKRLCEELKDFMKMHNFSSIEDFR 370
+ E L M + SS+E+ R
Sbjct: 280 A-CPDIIENLPKVMDKYGISSLENLR 304
>gi|325831358|ref|ZP_08164612.1| dihydroorotate dehydrogenase 1B [Eggerthella sp. HGA1]
gi|325486612|gb|EGC89060.1| dihydroorotate dehydrogenase 1B [Eggerthella sp. HGA1]
Length = 357
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 150/327 (45%), Gaps = 30/327 (9%)
Query: 46 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
D+ + + GL+M NP + SG GAV K VSL+ N +PR A
Sbjct: 58 DMRVNLGGLEMKNPVTVASGTFAAGREYGDFVDVAALGAVTTKGVSLNG-WAGNASPRIA 116
Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
+G S IG +N P LKE L L + + ++ +
Sbjct: 117 ETPSGMLNS-----IGLQN-------PGVAHLKEC-DLPWLAERGATVIVNVSGHSFDEY 163
Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
++I+ +E+ +DA EVN SCP+ G +G +E V A P+ K+
Sbjct: 164 VQVIEALEDVPVDAYEVNISCPN---VDAGGMTIGTCTDSVEAVVSRCRAATKRPLIVKL 220
Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
TPN+TD+TE AR A+ +G++ +S INT++ M ID + RP+ G GG S AV
Sbjct: 221 TPNVTDVTEIARAAVSAGADALSLINTLLG-MAIDAERRRPQ-LARGV---GGLSGPAVK 275
Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
P+AL V + + + D L G+GG+ DA EF+L GA V V T ++ +
Sbjct: 276 PVALRMVWEVHQAV-------DVPLLGMGGISCATDAVEFMLAGATAVAVGTANFVNPHA 328
Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRGA 372
V+ + + + + + H ++ GA
Sbjct: 329 TVE-IIDGMAQYCERHGIEDVQQLIGA 354
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,531,293,941
Number of Sequences: 23463169
Number of extensions: 268517792
Number of successful extensions: 744150
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3332
Number of HSP's successfully gapped in prelim test: 2033
Number of HSP's that attempted gapping in prelim test: 733483
Number of HSP's gapped (non-prelim): 5992
length of query: 422
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 277
effective length of database: 8,957,035,862
effective search space: 2481098933774
effective search space used: 2481098933774
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)